BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036177
(221 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
E ++ + K F+ ++L+ A+DN+ I+G+GG G V+KG L DG +VAVK+ K
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 181 E-QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
E QF EV ++S HRN+++L G C+ LLVY ++ NG
Sbjct: 79 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNV 180
E ++ + K F+ ++L+ A+DN+ I+G+GG G V+KG L DG +VAVK+ K
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 181 E-QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
E QF EV ++S HRN+++L G C+ LLVY ++ NG
Sbjct: 71 ELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 112
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
DLE+AT+N+ +IG G G V+KG+L DG VA+K+ +E+F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
H ++V L+G C E +L+Y+++ NG
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENG 120
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
DLE+AT+N+ +IG G G V+KG+L DG VA+K+ +E+F E+ LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFILNG 221
H ++V L+G C E +L+Y+++ NG
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENG 120
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
IG+G G VF G L D +VAVK + +++ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 206 LETEVPLLVYEFILNG 221
+ + +V E + G
Sbjct: 182 TQKQPIYIVMELVQGG 197
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 148 IGQGGQGTVFKGML-TDGRIVAVKKSKSVHESNVE-QFINEVVILSQINHRNVVKLLGCC 205
IG+G G VF G L D +VAVK + +++ +F+ E IL Q +H N+V+L+G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 206 LETEVPLLVYEFILNG 221
+ + +V E + G
Sbjct: 182 TQKQPIYIVMELVQGG 197
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
+G+G G VF +L D +VAVK K ES + F E +L+ + H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 202 LGCCLETEVPLLVYEFILNG 221
G C E L+V+E++ +G
Sbjct: 86 FGVCTEGRPLLMVFEYMRHG 105
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
+G+G G VF +L D +VAVK K ES + F E +L+ + H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 202 LGCCLETEVPLLVYEFILNG 221
G C E L+V+E++ +G
Sbjct: 80 FGVCTEGRPLLMVFEYMRHG 99
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 148 IGQGGQGTVF----KGMLT--DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKL 201
+G+G G VF +L D +VAVK K ES + F E +L+ + H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 202 LGCCLETEVPLLVYEFILNG 221
G C E L+V+E++ +G
Sbjct: 109 FGVCTEGRPLLMVFEYMRHG 128
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHG 112
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHG 135
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG 117
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG 117
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHG 115
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHG 136
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHG 114
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHG 109
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHG 176
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHG 116
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHG 116
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHG 122
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG 117
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHG 117
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHG 118
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHG 115
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 145 SRIIGQGGQGTVFKGML--TDGRIV--AVKKSKSVHE-SNVEQFINEVVILSQINHRNVV 199
+ +IG+G G V+ G L DG+ + AVK + + V QF+ E +I+ +H NV+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 200 KLLGCCLETE-VPLLVYEFILNG 221
LLG CL +E PL+V ++ +G
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHG 118
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
F L DN + + IG+GG G V KG L + V KS + +S E
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
+F EV I+S +NH N+VKL G L P +V EF+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
F L DN + + IG+GG G V KG L + V KS + +S E
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
+F EV I+S +NH N+VKL G L P +V EF+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 11/98 (11%)
Query: 130 FTSKDLEKATDN-YKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE------- 181
F L DN + + IG+GG G V KG L + V KS + +S E
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 182 -QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
+F EV I+S +NH N+VKL G L P +V EF+
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFV 103
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
F+ +L+ T+N+ I +G+GG G V+KG + + VAVKK ++ + E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
QF E+ ++++ H N+V+LLG + + LVY ++ NG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
F+ +L+ T+N+ I +G+GG G V+KG + + VAVKK ++ + E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
QF E+ ++++ H N+V+LLG + + LVY ++ NG
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
F+ +L+ T+N+ I +G+GG G V+KG + + VAVKK ++ + E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
QF E+ ++++ H N+V+LLG + + LVY ++ NG
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 109
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV------HESNVEQFINEVVILSQINH 195
K +++G G GTV+KG+ + +G V + + + ++NVE F++E +I++ ++H
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDH 76
Query: 196 RNVVKLLGCCLETEVPLL 213
++V+LLG CL + L+
Sbjct: 77 PHLVRLLGVCLSPTIQLV 94
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 8/78 (10%)
Query: 143 KVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSV------HESNVEQFINEVVILSQINH 195
K +++G G GTV+KG+ + +G V + + + ++NVE F++E +I++ ++H
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDH 99
Query: 196 RNVVKLLGCCLETEVPLL 213
++V+LLG CL + L+
Sbjct: 100 PHLVRLLGVCLSPTIQLV 117
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 86 EPPFYIITEFMTYG 99
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIIIEFMTYG 94
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIIIEFMTYG 94
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIITEFMTYG 94
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 86 EPPFYIITEFMTYG 99
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 79 EPPFYIIIEFMTYG 92
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 86 EPPFYIIIEFMTYG 99
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 82 EPPFYIIIEFMTYG 95
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 86 EPPFYIITEFMTYG 99
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 82 EPPFYIITEFMTYG 95
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 85 EPPFYIITEFMTYG 98
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 86 EPPFYIITEFMTYG 99
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 83 EPPFYIITEFMTYG 96
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 79 EPPFYIITEFMTYG 92
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 83 EPPFYIITEFMTYG 96
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIITEFMTYG 94
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 83 EPPFYIITEFMTYG 96
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIITEFMTYG 94
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 81 EPPFYIITEFMTYG 94
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 93
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 94 EPPFYIITEFMTYG 107
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
A ++ ++RI+G+G G V++G+ T+ + VAVK K N E+F++E VI+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
++H ++VKL+G +E E ++ E G
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELYPYG 93
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
A ++ ++RI+G+G G V++G+ T+ + VAVK K N E+F++E VI+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
++H ++VKL+G +E E ++ E G
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELYPYG 97
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 288 EPPFYIITEFMTYG 301
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKK-SKSVHESNVEQFINEVVILSQ 192
A ++ ++RI+G+G G V++G+ T+ + VAVK K N E+F++E VI+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 193 INHRNVVKLLGCCLETEVPLLVYEFILNG 221
++H ++VKL+G +E E ++ E G
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELYPYG 109
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAVK----KSKSVHESNVEQFINE 186
+D+ + + R++G+G G+V + L DG V V K+ + S++E+F+ E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 187 VVILSQINHRNVVKLLGCCLET------EVPLLVYEFILNG 221
+ + +H +V KL+G L + +P+++ F+ +G
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHG 116
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
+V ++G+G G V K + VA+K+ +S ES + FI E+ LS++NH N+VKL
Sbjct: 11 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLY 67
Query: 203 GCCL 206
G CL
Sbjct: 68 GACL 71
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 143 KVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLL 202
+V ++G+G G V K + VA+K+ +S ES + FI E+ LS++NH N+VKL
Sbjct: 12 EVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLY 68
Query: 203 GCCL 206
G CL
Sbjct: 69 GACL 72
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 285 EPPFYIITEFMTYG 298
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 327 EPPFYIITEFMTYG 340
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V++G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 208 TEVPLLVYEFILNG 221
++ EF+ G
Sbjct: 79 EPPFYIITEFMTYG 92
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 141 NYKVSRIIGQGGQGTVFKG------MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQIN 194
N + R +G+G G VF D +VAVK K ++ + F E +L+ +
Sbjct: 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ 73
Query: 195 HRNVVKLLGCCLETEVPLLVYEFILNG 221
H ++VK G C+E + ++V+E++ +G
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHG 100
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 11/89 (12%)
Query: 144 VSRIIGQGGQGTVFKGML--TDGRI--VAVKKSKSVHESN--VEQFINEVVILSQINHRN 197
+ +I+G+G G+V +G L DG VAVK K + S +E+F++E + +H N
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 198 VVKLLGCCLETEV-----PLLVYEFILNG 221
V++LLG C+E P+++ F+ G
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYG 126
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKS 172
G+ ++ + E A + +SR +GQG G V++G+ T I V ++
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 173 KSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
S+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 61 ASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 11/109 (10%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKS 172
G+ ++ + E A + +SR +GQG G V++G+ T I V ++
Sbjct: 1 GSFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA 60
Query: 173 KSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
S+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 61 ASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 107
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV 85
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV 85
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
+F + E A + +SR +GQG G V++G+ T I V ++ S+ E
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 65 --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 104
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV 85
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPV 85
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 29 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 88
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPV 113
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPV 90
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 11/102 (10%)
Query: 130 FTSKDLEKATDNYKVSRI------IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVE-- 181
F+ +L+ T+N+ I G+GG G V+KG + + VAVKK ++ + E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
QF E+ + ++ H N+V+LLG + + LVY + NG
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNG 106
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
+ Y+ +G+G G V+K + GRIVA+K+ + + E I E+ +L +++H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 198 VVKLLGCCLETEVPLLVYEFI 218
+V L+ LV+EF+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM 101
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPV 87
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPV 88
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
S N ++ + E A + +SR +GQG G V++G+ T I
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
V ++ S+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 63 VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFI--NEVVILSQI 193
++ + Y+ ++G+G G V K D GRIVA+KK + + + I E+ +L Q+
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
H N+V LL C + + LV+EF+
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFV 106
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
S N ++ + E A + +SR +GQG G V++G+ T I
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
V ++ S+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 63 VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 113
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQINHRN 197
+ Y+ +G+G G V+K + GRIVA+K+ + + E I E+ +L +++H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 198 VVKLLGCCLETEVPLLVYEFI 218
+V L+ LV+EF+
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM 101
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVA 168
S N ++ + E A + +SR +GQG G V++G+ T I
Sbjct: 25 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 84
Query: 169 VKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
V ++ S+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 85 VNEAASMRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 135
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K + S E FI E ++ +++H +V+L G CLE
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 208 TEVPLLVYEFILNG 221
LV+EF+ +G
Sbjct: 77 QAPICLVFEFMEHG 90
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 130 FTSKDLEKATDNY---------KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH 176
FT +D +A + K+ ++IG G G V G L G+ VA+K KS +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 177 -ESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
E F++E I+ Q +H NV+ L G ++ +++ EF+ NG
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENG 119
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 146 RIIGQGGQGTVFKGML--TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRNVV 199
++IG G G V+KGML + G+ VA+K K+ + E F+ E I+ Q +H N++
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 200 KLLGCCLETEVPLLVYEFILNG 221
+L G + + +++ E++ NG
Sbjct: 110 RLEGVISKYKPMMIITEYMENG 131
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K + S E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 208 TEVPLLVYEFILNG 221
LV+EF+ +G
Sbjct: 74 QAPICLVFEFMEHG 87
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV 465
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGML----TDGRIVAVKKSKSVHESNV-EQFIN 185
+++D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+
Sbjct: 381 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 440
Query: 186 EVVILSQINHRNVVKLLGCCLETEV 210
E + + Q +H ++VKL+G E V
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPV 465
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K + S E FI E ++ +++H +V+L G CLE
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 208 TEVPLLVYEFILNG 221
LV+EF+ +G
Sbjct: 74 QAPICLVFEFMEHG 87
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K + S E FI E ++ +++H +V+L G CLE
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 208 TEVPLLVYEFILNG 221
LV+EF+ +G
Sbjct: 72 QAPICLVFEFMEHG 85
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKS 174
+ ++ + E A + +SR +GQG G V++G+ T I V ++ S
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 62 MRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 143 KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
K+ ++IG G G V G L G+ VA+K KS + E F++E I+ Q +H N
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPN 69
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
V+ L G ++ +++ EF+ NG
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENG 93
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE--QFINEVVILSQINH 195
D Y++ +IG G G V + + R+VA+KK V E ++ + + E+ IL+++NH
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH 111
Query: 196 RNVVKLLGCCLETEV 210
+VVK+L + +V
Sbjct: 112 DHVVKVLDIVIPKDV 126
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKS 174
+ ++ + E A + +SR +GQG G V++G+ T I V ++ S
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 175 VHESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+ E +F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 62 MRERI--EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 106
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLT--DGRIVAVKKSKSVHESNVE-QFINEVV 188
E +N + R IG+G G VF+ G+L +VAVK K ++++ F E
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
++++ ++ N+VKLLG C + L++E++ G
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG 135
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL 85
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 59
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL 84
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL 88
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL 86
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K K S + FI E ++ +++H +V+L G CLE
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 208 TEVPLLVYEFILNG 221
LV+EF+ +G
Sbjct: 94 QAPICLVFEFMEHG 107
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+EF+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL 87
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL 83
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFL 88
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL 83
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL 91
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL 84
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
++ + E A + +SR +GQG G V++G+ T I V ++ S+ E
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 61 --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL 83
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESN 179
++ + E A + +SR +GQG G V++G+ T I V ++ S+ E
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 180 VEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 64 --EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 103
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL 85
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL 84
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFL 91
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V+ G+ + K+ VE+F+ E ++ +I H N+V+LLG C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTL 99
Query: 208 TEVPLLVYEFILNG 221
+V E++ G
Sbjct: 100 EPPFYIVTEYMPYG 113
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSVHESNVE-QFINEVV 188
E N + R +G G G V++G M D VAVK V+ E F+ E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 133
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 4 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 63
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 116
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 11 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 70
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 123
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 19 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 19 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAVK ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAVK ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAVK ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 19 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 12/113 (10%)
Query: 117 LSSNEGN----IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI-- 166
+ S EGN I+ T+L ++ E +N + + +G G G V + G+ + +
Sbjct: 19 IESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLK 78
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
VAVK KS H E ++E+ I+S + H N+V LLG C L++ E+
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEY 131
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR----IVAVKKSKSVHESNV-EQFINEVV 188
D E + ++ R IG+G G V +G+ VA+K K+ +V E+F+ E +
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 189 ILSQINHRNVVKLLGCCLETEV 210
+ Q +H ++VKL+G E V
Sbjct: 61 TMRQFDHPHIVKLIGVITENPV 82
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 146 RIIGQGGQGTVFKGMLTD---GRIV-AVKKSKSVHE-SNVEQFINEVVILSQINHRNVVK 200
R+IG+G G V+ G D RI A+K + E VE F+ E +++ +NH NV+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 201 LLGCCLETE-VPLLVYEFILNG 221
L+G L E +P ++ ++ +G
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHG 108
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGR----IVAVKKSK-SV 175
+++ K+ E N + + +G+G G V K GR VAVK K +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 176 HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
S + ++E +L Q+NH +V+KL G C + LL+ E+ G
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGR----IVAVKKSK-SV 175
+++ K+ E N + + +G+G G V K GR VAVK K +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 176 HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
S + ++E +L Q+NH +V+KL G C + LL+ E+ G
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGR----IVAVKKSK-SV 175
+++ K+ E N + + +G+G G V K GR VAVK K +
Sbjct: 6 SVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA 65
Query: 176 HESNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
S + ++E +L Q+NH +V+KL G C + LL+ E+ G
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG 111
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S++NH+N+V+ +G L++ ++ E + G
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 119
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S++NH+N+V+ +G L++ ++ E + G
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGG 133
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 127 TKLFTSKDLEKATDNYKVSRIIGQGGQGTV-FKGMLTDGRIVAVKK-SKSVHESN--VEQ 182
+LF D EK + R IG G G V F + + +VA+KK S S +SN +
Sbjct: 44 AELFFKDDPEKLFSDL---REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 100
Query: 183 FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
I EV L ++ H N ++ GC L LV E+ L
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 127 TKLFTSKDLEKATDNYKVSRIIGQGGQGTV-FKGMLTDGRIVAVKK-SKSVHESN--VEQ 182
+LF D EK + R IG G G V F + + +VA+KK S S +SN +
Sbjct: 5 AELFFKDDPEKLFSDL---REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD 61
Query: 183 FINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFIL 219
I EV L ++ H N ++ GC L LV E+ L
Sbjct: 62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
IG G G V G + VA+K + S E FI E ++ +++H +V+L G CLE
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 208 TEVPLLVYEFILNG 221
LV EF+ +G
Sbjct: 75 QAPICLVTEFMEHG 88
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAV+ ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAV+ ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGG 98
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 144 VSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFI----NEVVILSQINHRNVV 199
+ IIG GG G V++ G VAVK ++ + ++ Q I E + + + H N++
Sbjct: 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 200 KLLGCCLETEVPLLVYEFILNG 221
L G CL+ LV EF G
Sbjct: 70 ALRGVCLKEPNLCLVMEFARGG 91
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 136
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 110
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESNVEQFI 184
+ E A + +SR +GQG G V++G+ T I V ++ S+ E +F+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFL 63
Query: 185 NEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 100
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 118
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGML---------TDGRIVAVKKSKSVHESNVEQFI 184
+ E A + +SR +GQG G V++G+ T I V ++ S+ E +F+
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI--EFL 61
Query: 185 NEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
NE ++ + N +VV+LLG + + L++ E + G
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG 98
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 119
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 125
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGG 133
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 159
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 135
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 145
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKG----MLTDGRI--VAVKKSKSV-HESNVEQFINEVV 188
E N + R +G G G V++G M D VAVK V E + F+ E +
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
I+S+ NH+N+V+ +G L++ ++ E + G
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGG 118
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)
Query: 119 SNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHE 177
S+E +EK ++ S + Y IGQG GTV+ M + G+ VA+++ +
Sbjct: 2 SDEEILEKLRIIVS--VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ 59
Query: 178 SNVEQFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
E INE++++ + + N+V L L + +V E++ G
Sbjct: 60 PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 103
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 88 VGDELWVVMEFLEGG 102
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 92 VGDELWVVMEFLEGG 106
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 219 VGDELWVVMEFLEGG 233
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 97 VGDELWVVMEFLEGG 111
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
++ D + NY++ + IG+G V + +LT GR VAVK ++ +++++ E
Sbjct: 6 SATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFRE 64
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I+ +NH N+VKL +ETE L LV E+ G
Sbjct: 65 VRIMKILNHPNIVKLFE-VIETEKTLYLVMEYASGG 99
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 99 VGDELWVVMEFLEGG 113
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V + + G++VAVKK + E NEVVI+ H NVV++ L
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 142 VGDELWVVMEFLEGG 156
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 143 KVSRIIGQGGQGTVFKGMLT-DGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
K+ R+IG G G V G L G+ VA+K K + E F+ E I+ Q +H N
Sbjct: 46 KIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPN 105
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
VV L G + ++V EF+ NG
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENG 129
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IGQG GTV+ M + G+ VA+++ + E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 207 ETEVPLLVYEFILNG 221
+ +V E++ G
Sbjct: 88 VGDELWVVMEYLAGG 102
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINE 186
TS D + NY++ + IG+G V + +LT G+ VAVK ++ S++++ E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFRE 63
Query: 187 VVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
V I +NH N+VKL +ETE L LV E+ G
Sbjct: 64 VRIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGG 98
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+ K + E+ I E+ +L ++NH
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFL 84
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+ K + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+EF+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL 83
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IGQG GTV+ M + G+ VA+++ + E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 207 ETEVPLLVYEFILNG 221
+ +V E++ G
Sbjct: 88 VGDELWVVMEYLAGG 102
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IGQG GTV+ M + G+ VA+++ + E INE++++ + + N+V L L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 207 ETEVPLLVYEFILNG 221
+ +V E++ G
Sbjct: 88 VGDELWVVMEYLAGG 102
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 144 VSRIIGQGGQGTVFKG------MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRN 197
+ R +G+G G VF D +VAVK K + + F E +L+ + H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
+VK G C + + ++V+E++ +G
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHG 102
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IGQG GTV+ M + G+ VA+++ + E INE++++ + + N+V L L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 207 ETEVPLLVYEFILNG 221
+ +V E++ G
Sbjct: 89 VGDELWVVMEYLAGG 103
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM 99
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 79 NPHVCRLLGICLTSTVQLIM 98
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM 96
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM 96
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 76 NPHVCRLLGICLTSTVQLIM 95
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 47/80 (58%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM 99
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 143 KVSRIIGQGGQGTVFKGML-TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
K+ +IG G G V +G L G+ VA+K K + E +F++E I+ Q H N
Sbjct: 17 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 76
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
+++L G + +++ EF+ NG
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENG 100
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 143 KVSRIIGQGGQGTVFKGML-TDGR---IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
K+ +IG G G V +G L G+ VA+K K + E +F++E I+ Q H N
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPN 78
Query: 198 VVKLLGCCLETEVPLLVYEFILNG 221
+++L G + +++ EF+ NG
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENG 102
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 70 NPHVCRLLGICLTSTVQLI 88
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Query: 142 YKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQINH 195
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ +++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 196 RNVVKLLGCCLETEVPLL 213
+V +LLG CL + V L+
Sbjct: 102 PHVCRLLGICLTSTVQLI 119
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQI 193
+ +N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 194 NHRNVVKLLGCCLETEVPLLVYEFI 218
NH N+VKLL LV+E +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV 87
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 78 NPHVCRLLGICLTSTVQLI 96
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 86 NPHVCRLLGICLTSTVQLI 104
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 83 NPHVCRLLGICLTSTVQLI 101
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 82 NPHVCRLLGICLTSTVQLI 100
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 83 NPHVCRLLGICLTSTVQLI 101
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 73 NPHVCRLLGICLTSTVQLI 91
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 78 NPHVCRLLGICLTSTVQLI 96
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM--LTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINH 195
+N++ IG+G G V+K LT G +VA+KK + E+ I E+ +L ++NH
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLT-GEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
N+VKLL LV+E +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHV 83
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++G G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 130 FTSKDLEKATDNY-KVSRIIGQGGQGTV---FKGMLTD--GRIVAVKKSKSVHESNVEQF 183
F +D + + + K R +G+G G+V L D G +VAVKK + E ++ F
Sbjct: 2 FEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 184 INEVVILSQINHRNVVKLLGCC 205
E+ IL + H N+VK G C
Sbjct: 62 EREIEILKSLQHDNIVKYKGVC 83
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 110 GLLLRQELSSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVA 168
GL+ R + ++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA
Sbjct: 13 GLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVA 72
Query: 169 VKKSKSVHESNVEQFIN------EVVILSQIN--HRNVVKLL 202
+K + S+ + N EVV+L +++ V++LL
Sbjct: 73 IKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL 114
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSK-SVHESNVEQFINEVVILSQINH 195
++ +K +G G TV+KG+ T G VA+K+ K E I E+ ++ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFILN 220
N+V+L LV+EF+ N
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN 87
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGR--IVAVKKSKSVHESNVEQFINEVVILSQIN 194
+D Y+ + +G G G V K LT I +KKS SN ++EV +L Q++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 195 HRNVVKL 201
H N++KL
Sbjct: 80 HPNIMKL 86
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 121 EGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVHES 178
EG + F K+ + IG+G G V ML D G VAVK K+ ++
Sbjct: 174 EGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKN--DA 228
Query: 179 NVEQFINEVVILSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
+ F+ E +++Q+ H N+V+LLG +E + L +V E++ G
Sbjct: 229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFIN-----EV 187
D++ Y+ +G+G TV+K + +IVA+KK K H S + IN E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 188 VILSQINHRNVVKLLGCCLETEVPLLVYEFI 218
+L +++H N++ LL LV++F+
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 143 KVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
K+ + IG+G G V ML D G VAVK K +++ + F+ E +++Q+ H N+V+
Sbjct: 24 KLLQTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQ 78
Query: 201 LLGCCLETEVPL-LVYEFILNG 221
LLG +E + L +V E++ G
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKG 100
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 141 NYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINHR 196
NY++ + IG+G V + +LT G+ VAVK ++ S++++ EV I+ +NH
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 197 NVVKLLGCCLETEVPL-LVYEFILNG 221
N+VKL +ETE L LV E+ G
Sbjct: 67 NIVKLFE-VIETEKTLYLVMEYASGG 91
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 143 KVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
K+ + IG+G G V ML D G VAVK K +++ + F+ E +++Q+ H N+V+
Sbjct: 15 KLLQTIGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQ 69
Query: 201 LLGCCLETEVPL-LVYEFILNG 221
LLG +E + L +V E++ G
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKG 91
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 39 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 98
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 99 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 141
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 143 KVSRIIGQGGQGTVFKGMLTD--GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
K+ + IG+G G V ML D G VAVK K+ ++ + F+ E +++Q+ H N+V+
Sbjct: 9 KLLQTIGKGEFGDV---MLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQ 63
Query: 201 LLGCCLETEVPL-LVYEFILNG 221
LLG +E + L +V E++ G
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKG 85
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 109
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 182 QFIN------EVVILSQIN--HRNVVKLL 202
+ N EVV+L +++ V++LL
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLL 108
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 182 QFIN------EVVILSQIN--HRNVVKLL 202
+ N EVV+L +++ V++LL
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLL 107
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 182 QFIN------EVVILSQIN--HRNVVKLL 202
+ N EVV+L +++ V++LL
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLL 95
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESN--VEQFINEVVILSQIN 194
+ D Y+ +G+G G V+K + T VA+K+ + HE I EV +L ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 195 HRNVVKLLGCCLETEVPLLVYEFILN 220
HRN+++L L++E+ N
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN 117
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNV-----EQFINEVVIL 190
K T+ KV +++G G GTV+KG+ + DG V + + V N ++ ++E ++
Sbjct: 15 KETELRKV-KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 191 SQINHRNVVKLLGCCLETEVPLL 213
+ + V +LLG CL + V L+
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQLV 96
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 6 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 65
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 66 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 108
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 7 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 66
Query: 182 QFIN------EVVILSQIN--HRNVVKLL 202
+ N EVV+L +++ V++LL
Sbjct: 67 ELPNGTRVPMEVVLLKKVSSGFSGVIRLL 95
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 6 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 65
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 66 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 108
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 122
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 121
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 122
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 121
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 20 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 79
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 80 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 122
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 34 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 93
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 94 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 136
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGR--IVAVKKSKSVHESNVEQFINEVVILSQIN 194
+D Y+ + +G G G V K LT I +KKS SN ++EV +L Q++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 195 HRNVVKL 201
H N++KL
Sbjct: 63 HPNIMKL 69
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK------KSKSVHESNVEQFINEVVILSQI 193
+K +++G G GTV+KG+ + +G V + + + ++N E ++E +++ +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKE-ILDEAYVMASV 108
Query: 194 NHRNVVKLLGCCLETEVPLL 213
++ +V +LLG CL + V L+
Sbjct: 109 DNPHVCRLLGICLTSTVQLI 128
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 34 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 93
Query: 182 QFIN------EVVILSQIN--HRNVVKLL 202
+ N EVV+L +++ V++LL
Sbjct: 94 ELPNGTRVPMEVVLLKKVSSGFSGVIRLL 122
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%)
Query: 119 SNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-----MLTDGRI-VAVKKS 172
+N I+ T+L E + + +G G G V + + +D + VAVK
Sbjct: 18 NNXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML 77
Query: 173 K-SVHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
K S H + E ++E+ +LS + NH N+V LLG C L++ E+
Sbjct: 78 KPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 124
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 9/103 (8%)
Query: 123 NIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVE 181
++ TKL K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+
Sbjct: 19 DLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG 78
Query: 182 QFIN------EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+ N EVV+L +++ V++LL + +L+ E
Sbjct: 79 ELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 121
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHR 77
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVI 189
D + NY++ + IG+G V + +LT GR VA+K ++ +++++ EV I
Sbjct: 6 DEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 190 LSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
+ +NH N+VKL +ETE L L+ E+ G
Sbjct: 65 MKILNHPNIVKLFE-VIETEKTLYLIMEYASGG 96
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 111
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTV--FKGMLTDGRIVAVK--KSKSVHESNVEQFINEVVI 189
D + NY++ + IG+G V + +LT GR VA+K ++ +++++ EV I
Sbjct: 9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRI 67
Query: 190 LSQINHRNVVKLLGCCLETEVPL-LVYEFILNG 221
+ +NH N+VKL +ETE L L+ E+ G
Sbjct: 68 MKILNHPNIVKLFE-VIETEKTLYLIMEYASGG 99
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 87
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 85
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 86
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKG-MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
++K +IG GG G VFK DG+ +K+ K N E+ EV L++++H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKY----NNEKAEREVKALAKLDHVNIV 67
Query: 200 KLLGC 204
GC
Sbjct: 68 HYNGC 72
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML-----TDGRI-VAVKKSK-SVH 176
I+ T+L E + + +G G G V + +D + VAVK K S H
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
+ E ++E+ +LS + NH N+V LLG C L++ E+
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 108
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 84
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++ G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 195 HRNVVKLLGCCLETEVPLLV 214
+ +V +LLG CL + V L++
Sbjct: 83 NPHVCRLLGICLTSTVQLIM 102
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKGML------TDGRIVAVKKSKS-VHESNVEQ 182
+ + E A + K+ + +G+G G V + R VAVK K S +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 183 FINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
+ E+ IL+ I H NVV LLG C + PL+V
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMV 109
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 81
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 78
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQF---INEVVILSQINHR 196
N+++ + IG+G V++ L DG VA+KK + + + I E+ +L Q+NH
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 197 NVVKLLGCCLE 207
NV+K +E
Sbjct: 93 NVIKYYASFIE 103
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINE--VVILSQINHRN 197
DN K+ +IG+G G V+KG L D R VAV K +N + FINE + + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAV---KVFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 198 VVKLL 202
+ + +
Sbjct: 69 IARFI 73
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-----MLTDGRI-VAVKKSK-SVH 176
I+ T+L E + + +G G G V + + +D + VAVK K S H
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
+ E ++E+ +LS + NH N+V LLG C L++ E+
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 79
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-----MLTDGRI-VAVKKSK-SVH 176
I+ T+L E + + +G G G V + + +D + VAVK K S H
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
+ E ++E+ +LS + NH N+V LLG C L++ E+
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 131
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 164 GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVKK + E ++ F E+ IL + H N+VK G C
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKG-----MLTDGRI-VAVKKSK-SVH 176
I+ T+L E + + +G G G V + + +D + VAVK K S H
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 177 ESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
+ E ++E+ +LS + NH N+V LLG C L++ E+
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEY 126
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ +F + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ +F + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++ G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 83 NPHVCRLLGICLTSTVQLI 101
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGR----IVAVKKSKSVHESNV-EQFINEVVILSQIN 194
+K +++ G GTV+KG+ + +G VA+K+ + ++ ++E +++ ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 195 HRNVVKLLGCCLETEVPLL 213
+ +V +LLG CL + V L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 77
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ +F + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 3 PSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 66
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 127 TKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE-- 181
+ +F + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 182 --QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 61 RIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 102
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 77
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 111
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 66
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 68
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 69 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 102
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 141 NYKVSRIIGQGGQGTVFKG-MLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
++K +IG GG G VFK DG+ +++ K N E+ EV L++++H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKY----NNEKAEREVKALAKLDHVNIV 68
Query: 200 KLLGC 204
GC
Sbjct: 69 HYNGC 73
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 70
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 71 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 104
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 66
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 112
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 146
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D K+ + +G+G G V + R VAVK K + H S
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 66
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 100
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQI 193
+D YK R++G+G G V K +T G+ AVK K + +++ E + EV +L Q+
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 194 NHRNVVKL 201
+H N++KL
Sbjct: 107 DHPNIMKL 114
>pdb|1NZI|A Chain A, Crystal Structure Of The Cub1-Egf Interaction Domain Of
Complement Protease C1s
pdb|1NZI|B Chain B, Crystal Structure Of The Cub1-Egf Interaction Domain Of
Complement Protease C1s
Length = 159
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 17/31 (54%)
Query: 18 ATDIDECLDKEKYHCEGKCKNTIGSYTCDCP 48
ATDI+EC D C C N IG Y C CP
Sbjct: 114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCP 144
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 148 IGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGC 204
+G G G V+K + G + A K ++ E +E +I E+ IL+ +H +VKLLG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQI 193
+D YK R++G+G G V K +T G+ AVK K + +++ E + EV +L Q+
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 194 NHRNVVKL 201
+H N++KL
Sbjct: 108 DHPNIMKL 115
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 148 IGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGC 204
+G G G V+K + G + A K ++ E +E +I E+ IL+ +H +VKLLG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQI 193
+D YK R++G+G G V K +T G+ AVK K + +++ E + EV +L Q+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 194 NHRNVVKL 201
+H N++KL
Sbjct: 84 DHPNIMKL 91
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVF--KGMLTDGRIVAVK---KSKSVHESNVEQF 183
+F +D YK R++G+G G V K +T G+ AVK K + +++ E
Sbjct: 21 MFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESL 79
Query: 184 INEVVILSQINHRNVVKL 201
+ EV +L Q++H N++KL
Sbjct: 80 LREVQLLKQLDHPNIMKL 97
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 144 VSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKL 201
+S I+GQG VF+G G + A+K ++ V+ + E +L ++NH+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 202 LGCCLETEV--PLLVYEF 217
ET +L+ EF
Sbjct: 73 FAIEEETTTRHKVLIMEF 90
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAIVT 86
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVT 110
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAIVT 98
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 191 SQINHRNVVKLLGCCLETEVPLL 213
+ H N++ +G + ++ ++
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIV 86
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 191 SQINHRNVVKLLGCCLETEVPLL 213
+ H N++ +G + ++ ++
Sbjct: 64 RKTRHVNILLFMGYSTKPQLAIV 86
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 27 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 86
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 87 RKTRHVNILLFMGYSTKPQLAIVT 110
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.0 bits (79), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 19 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 78
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 79 RKTRHVNILLFMGYSTKPQLAIVT 102
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 26 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 85
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G + ++ ++
Sbjct: 86 RKTRHVNILLFMGYSTKPQLAIVT 109
>pdb|1UZJ|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human
Fibrillin-1, Holo Form.
pdb|1UZJ|B Chain B, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human
Fibrillin-1, Holo Form.
pdb|1UZJ|C Chain C, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human
Fibrillin-1, Holo Form.
pdb|1UZP|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human
Fibrillin-1, Sm Bound Form Cbegf23 Domain Only.
pdb|1UZQ|A Chain A, Integrin Binding Cbegf22-Tb4-Cbegf33 Fragment Of Human
Fibrillin-1, Apo Form Cbegf23 Domain Only
Length = 162
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCP 48
TD++ECLD G C NT GSY CDCP
Sbjct: 1 TDVNECLDPTTCI-SGNCVNTPGSYICDCP 29
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY 52
DIDEC + GKC NT GS+ C CP G Y
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 153
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQ 192
+A Y+ IG+G G VFK + GR VA+K+ + + E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 193 I---NHRNVVKLLGCC 205
+ H NVV+L C
Sbjct: 68 LETFEHPNVVRLFDVC 83
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH 195
E ++ K+ + +G G G V+ G + VAVK K S V+ F+ E ++ + H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQH 66
Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
+V+L + E ++ EF+ G
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKG 92
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQ 192
+A Y+ IG+G G VFK + GR VA+K+ + + E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 193 I---NHRNVVKLLGCC 205
+ H NVV+L C
Sbjct: 68 LETFEHPNVVRLFDVC 83
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+S D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 191 SQINHRNVVKLLGCCLETEVPLL 213
+ H N++ +G + ++ ++
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAIV 83
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGCC 205
IG+G G V+K G A+KK + E I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 206 LETEVPLLVYEFI 218
+ +LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 139 TDNYKVSRIIGQGGQGTVF--KGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQI 193
+D YK R++G+G G V K +T G+ AVK K + +++ E + EV +L Q+
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 194 NHRNVVKL 201
+H N+ KL
Sbjct: 84 DHPNIXKL 91
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D + + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|1UZK|A Chain A, Integrin Binding Cbegf22-tb4-cbegf33 Fragment Of Human
Fibrillin-1, Ca Bound To Cbegf23 Domain Only
Length = 162
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 19 TDIDECLDKEKYHCEGKCKNTIGSYTCDCP 48
TD++ECLD G C NT GSY CDCP
Sbjct: 1 TDVNECLDPTTCI-SGNCVNTPGSYICDCP 29
Score = 33.9 bits (76), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 19/33 (57%)
Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMY 52
DIDEC + GKC NT GS+ C CP G Y
Sbjct: 121 DIDECQELPGLCQGGKCINTFGSFQCRCPTGYY 153
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGCC 205
IG+G G V+K G A+KK + E I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 206 LETEVPLLVYEFI 218
+ +LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESN--VEQFINEVVILSQINHRNVVKLLGCC 205
IG+G G V+K G A+KK + E I E+ IL ++ H N+VKL
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 206 LETEVPLLVYEFI 218
+ +LV+E +
Sbjct: 70 HTKKRLVLVFEHL 82
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 144 VSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHE-SNVEQFINEVVILSQINHRNVVKL 201
+S I+GQG VF+G G + A+K ++ V+ + E +L ++NH+N+VKL
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 202 LGCCLETEV--PLLVYEF 217
ET +L+ EF
Sbjct: 73 FAIEEETTTRHKVLIMEF 90
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKG--MLTDGRIVAVKKSK--SVHESNVEQFINEVVILSQ 192
+A Y+ IG+G G VFK + GR VA+K+ + + E I EV +L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 193 I---NHRNVVKLLGCC 205
+ H NVV+L C
Sbjct: 68 LETFEHPNVVRLFDVC 83
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKS-KSVHESNVEQFINEVVIL 190
++DL D +++ +G G G V+K + ++A K + E +E ++ E+ IL
Sbjct: 30 TRDL-NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 191 SQINHRNVVKLLGC 204
+ +H N+VKLL
Sbjct: 89 ASCDHPNIVKLLDA 102
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ ++ + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 4 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 63
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 64 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 106
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKS-KSVHESNVEQFINEVVIL 190
++DL D +++ +G G G V+K + ++A K + E +E ++ E+ IL
Sbjct: 30 TRDL-NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 191 SQINHRNVVKLLGC 204
+ +H N+VKLL
Sbjct: 89 ASCDHPNIVKLLDA 102
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 132 SKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKS-KSVHESNVEQFINEVVIL 190
++DL D +++ +G G G V+K + ++A K + E +E ++ E+ IL
Sbjct: 30 TRDL-NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 191 SQINHRNVVKLLGC 204
+ +H N+VKLL
Sbjct: 89 ASCDHPNIVKLLDA 102
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 140 DNYKVSRIIGQGGQGTVFK-GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
D+Y + +G G G V + G A K + HES+ E E+ +S + H +
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
V L + +++YEF+ G
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGG 239
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ ++ + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 140 DNYKVSRIIGQGGQGTVFK-GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
D+Y + +G G G V + G A K + HES+ E E+ +S + H +
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
V L + +++YEF+ G
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGG 133
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 76 QRPIFIITEYMANG 89
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE- 181
+ ++ + E + + + R +GQG G V++G D G K+V+ES
Sbjct: 3 PSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 62
Query: 182 ---QFINEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+F+NE ++ +VV+LLG + + L+V E + +G
Sbjct: 63 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG 105
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D + + +G+G G V + R VAVK K + H S
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHR 75
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 109
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 82 QRPIFIITEYMANG 95
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 91 QRPIFIITEYMANG 104
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 75 QRPIFIITEYMANG 88
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 91 QRPIFIITEYMANG 104
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 76 QRPIFIITEYMANG 89
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 148 IGQGGQGTVFKGMLTDGR-IVAVKKSK--SVHESNVEQFINEVVILSQINHRNVVKLLGC 204
IG+G GTVFK + IVA+K+ + E + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 205 CLETEVPLLVYEF 217
+ LV+EF
Sbjct: 70 LHSDKKLTLVFEF 82
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 148 IGQGGQGTVFKGMLTDGR-IVAVKKSK--SVHESNVEQFINEVVILSQINHRNVVKLLGC 204
IG+G GTVFK + IVA+K+ + E + E+ +L ++ H+N+V+L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 205 CLETEVPLLVYEF 217
+ LV+EF
Sbjct: 70 LHSDKKLTLVFEF 82
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFIN--- 185
KD E Y++ ++G+GG GTVF G LTD VA+K +++ + S + +
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 186 EVVILSQI----NHRNVVKLLGCCLETEVPLLVYEFILNG 221
EV +L ++ H V++LL E +LV E L
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPA 123
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VA+K K S ++FI E ++ ++H +V+L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 208 TEVPLLVYEFILNG 221
++ E++ NG
Sbjct: 71 QRPIFIITEYMANG 84
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 129 LFTSKDLEKATDNYKVSRIIGQGGQGTVF----KGMLTDGRIVAVKKSK------SVHES 178
++ K K ++Y R +G G G V K ++ I +KKS+ S
Sbjct: 25 MYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNK 84
Query: 179 NVEQF----INEVVILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
N+E+F NE+ +L ++H N++KL + + LV EF G
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGG 131
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V G+ VAVKK + E NEVVI+ +H NVV + L
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 207 ETEVPLLVYEFILNG 221
+ +V EF+ G
Sbjct: 113 VGDELWVVMEFLEGG 127
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 130 FTSKDLEKATDNYKVSRIIGQGGQGTVFKG------MLTDGRIVAVK--KSKSVHESNVE 181
+ + E D + + +G+G G V + R VAVK K + H S
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHR 76
Query: 182 QFINEVVILSQINHR-NVVKLLGCCLETEVPLLV 214
++E+ IL I H NVV LLG C + PL+V
Sbjct: 77 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 110
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.9 bits (76), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
DN++ R++G+G G V + + G + AVK K + + +VE + E ILS +
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 196 RNVVKLLGCCLETEVPL-LVYEFILNG 221
+ L CC +T L V EF+ G
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGG 109
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+ ++ +IG+G G V+ G + + + +E ++ F EV+ Q H NVV
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 200 KLLGCCL 206
+G C+
Sbjct: 93 LFMGACM 99
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINH 195
E ++ K+ + +G G G V+ G + VAVK K S V+ F+ E ++ + H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS-VQAFLEEANLMKTLQH 67
Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
+V+L E ++ E++ G
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKG 93
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 148 IGQGGQGTV-FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCL 206
IG+G G V GR VAVK + E NEVVI+ H NVV++ L
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 207 ETEVPLLVYEFILNG 221
E ++ EF+ G
Sbjct: 113 VGEELWVLMEFLQGG 127
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
D E V + IG G GTV+KG V + + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 194 NHRNVVKLLGCCLETEVPLL 213
H N++ +G + ++ ++
Sbjct: 62 RHVNILLFMGYSTKPQLAIV 81
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
D E V + IG G GTV+KG V + + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 194 NHRNVVKLLGCCLETEVPLL 213
H N++ +G + ++ ++
Sbjct: 62 RHVNILLFMGYSTKPQLAIV 81
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 144 VSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLG 203
+S IG G GTV+KG V + K + F NEV +L + H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 131 TSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
+ D E V + IG G GTV+KG V + + ++ F NEV +L
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 191 SQINHRNVVKLLGCCLETEVPLLV 214
+ H N++ +G ++ ++
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAIVT 98
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 146 RIIGQGGQGTVFKGMLTD---GRIVAVKKSKSVHESNVE----QFINEVVILSQINHRNV 198
R +GQG G V++G D G K+V+ES +F+NE ++ +V
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
V+LLG + + L+V E + +G
Sbjct: 82 VRLLGVVSKGQPTLVVMELMAHG 104
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKGMLTDG-RIVAVKKSKSVHESNVE--QFINEVVILSQI 193
K DNY++ +IG+G G V+ + + VA+KK + E ++ + + E+ IL+++
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 194 NHRNVVKLLGCCLETEV 210
+++L + ++
Sbjct: 85 KSDYIIRLHDLIIPEDL 101
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 142 YKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
Y + +G GG G VF + D + VA+KK +V+ + E+ I+ +++H N+VK
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 201 LL 202
+
Sbjct: 73 VF 74
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 146 RIIGQGGQGTVF--KGMLTDGRIVA---VKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
++G G VF K LT G++ A +KKS + +S++E NE+ +L +I H N+V
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHENIVT 70
Query: 201 LLGCCLETEVPLLVYEFILNG 221
L T LV + + G
Sbjct: 71 LEDIYESTTHYYLVMQLVSGG 91
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 147 IIGQGGQ-GTVFKGMLTDGRIVAVKKS-KSVHESNVEQFINEVVILSQINHRNVVKLLGC 204
IIG+ G G V+K + ++A K + E +E ++ E+ IL+ +H N+VKLL
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 142 YKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVV 199
+++ +G GG G V + + D G VA+K+ + + N E++ E+ I+ ++NH NVV
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 200 KL------LGCCLETEVPLLVYEFILNG 221
L ++PLL E+ G
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGG 104
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.1 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 142 YKVSRIIGQGGQGTVFKGMLTD-GRIVAVKKSKS-VHESNVEQFINEVVILSQINHRNVV 199
+++ +G GG G V + + D G VA+K+ + + N E++ E+ I+ ++NH NVV
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 200 KL------LGCCLETEVPLLVYEFILNG 221
L ++PLL E+ G
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGG 103
>pdb|3DEM|A Chain A, Cub1-egf-cub2 Domain Of Human Masp-1/3
pdb|3DEM|B Chain B, Cub1-egf-cub2 Domain Of Human Masp-1/3
Length = 278
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 18 ATDIDECLDKE--KYHCEGKCKNTIGSYTCDCPIG--MYGDGKVGCR 60
A D+DEC ++E + C+ C N IG Y C C G ++ D + CR
Sbjct: 118 AVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRT-CR 163
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%)
Query: 134 DLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
D E V + IG G GTV+KG V + + ++ F NEV +L +
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 194 NHRNVVKLLGCCLETEVPLL 213
H N++ +G ++ ++
Sbjct: 62 RHVNILLFMGYSTAPQLAIV 81
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|1EMN|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal
Growth Factor-Like Domains, Minimized Average Structure
pdb|1EMO|A Chain A, Nmr Study Of A Pair Of Fibrillin Ca2+ Binding Epidermal
Growth Factor-Like Domains, 22 Structures
Length = 82
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 17 RATDIDECLDKEKYHCE-GKCKNTIGSYTCDCPIG 50
A D+DEC KE C+ G+C NT GSY C+CP G
Sbjct: 1 SAVDMDEC--KEPDVCKHGQCINTDGSYRCECPFG 33
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 4 KSQCSLIFLLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGM 51
+ +C ++L D DEC G CKN IG + C C G
Sbjct: 27 RCECPFGYILAGNECVDTDECSVGNPCG-NGTCKNVIGGFECTCEEGF 73
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|4AQB|A Chain A, Mbl-Ficolin Associated Protein-1, Map-1 Aka Map44
Length = 361
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 18 ATDIDECLDKE--KYHCEGKCKNTIGSYTCDCPIG--MYGDGKVGCR 60
A D+DEC ++E + C+ C N IG Y C C G ++ D + CR
Sbjct: 118 AVDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHTDNRT-CR 163
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 140 DNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
++ K +IG+G G V K G+ D I +K+ S + + F E+ +L ++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKL 82
Query: 194 -NHRNVVKLLGCCLETEVPLLVYEFILNG 221
+H N++ LLG C L E+ +G
Sbjct: 83 GHHPNIINLLGACEHRGYLYLAIEYAPHG 111
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 140 DNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
++ K +IG+G G V K G+ D I +K+ S + + F E+ +L ++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKL 72
Query: 194 -NHRNVVKLLGCCLETEVPLLVYEFILNG 221
+H N++ LLG C L E+ +G
Sbjct: 73 GHHPNIINLLGACEHRGYLYLAIEYAPHG 101
>pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The
Ldl Receptor
Length = 791
Score = 32.3 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 343 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 383
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLTDGRI--VAVKKSKS-VHESNVEQFINEVV 188
E +N + +++G G G V G+ G VAVK K S E ++E+
Sbjct: 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 189 ILSQI-NHRNVVKLLGCCLETEVPLLVYEF 217
+++Q+ +H N+V LLG C + L++E+
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEY 130
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V F +L G VAVKK S+ +++ ++ E+V+L +NH+
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 84 NIISLLN 90
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 140 DNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQI 193
++ K +IG+G G V K G+ D I +K+ S + + F E+ +L ++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKL 79
Query: 194 -NHRNVVKLLGCCLETEVPLLVYEFILNG 221
+H N++ LLG C L E+ +G
Sbjct: 80 GHHPNIINLLGACEHRGYLYLAIEYAPHG 108
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V F +L G VAVKK S+ +++ ++ E+V+L +NH+
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 82 NIISLLNV 89
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 142 YKVSRIIGQGGQGTVFKGMLTDGRIV-AVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
Y + IG+G G V + RI A KK +V++F E+ I+ ++H N+++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 201 L 201
L
Sbjct: 71 L 71
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRI-VAVKK---SKSVHESNVEQFINEVVILSQINH 195
+ YK+ +G GG TV+ T I VA+K E +++F EV SQ++H
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH 70
Query: 196 RNVVKLLGCCLETEVPLLVYEFI 218
+N+V ++ E + LV E+I
Sbjct: 71 QNIVSMIDVDEEDDCYYLVMEYI 93
>pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor
Length = 699
Score = 32.0 bits (71), Expect = 0.25, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 325 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 365
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 118 SSNEGNIEK-TKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAV----- 169
S+ EG ++ T L KDL ++ +G G G V +G G+ V+V
Sbjct: 2 SAGEGPLQSLTCLIGEKDL-------RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL 54
Query: 170 KKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV 210
K ++ FI EV + ++HRN+++L G L +
Sbjct: 55 KPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 95
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 142 YKVSRIIGQGGQGTVFKGMLTDGRIV-AVKKSKSVHESNVEQFINEVVILSQINHRNVVK 200
Y + IG+G G V + RI A KK +V++F E+ I+ ++H N+++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 201 L 201
L
Sbjct: 88 L 88
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 148 IGQGGQGTVFKGML------TDGRIVAVKKSKSVHESNV-EQFINEVVILSQINHRNVVK 200
+G+ G V+KG L + VA+K K E + E+F +E ++ +++ H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 201 LLGCCLETEVPLLVYEFILNG 221
LLG + + +++ + +G
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHG 97
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 118 SSNEGNIEK-TKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGML--TDGRIVAV----- 169
S+ EG ++ T L KDL ++ +G G G V +G G+ V+V
Sbjct: 2 SAGEGPLQSLTCLIGEKDL-------RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL 54
Query: 170 KKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLETEV 210
K ++ FI EV + ++HRN+++L G L +
Sbjct: 55 KPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPM 95
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 148 IGQGGQGTVFKGMLTD----GRI----VAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+GQG +FKG+ + G++ V +K H + E F ++S+++H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 200 KLLGCCLETEVPLLVYEFI 218
G C + +LV EF+
Sbjct: 76 LNYGVCFCGDENILVQEFV 94
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 148 IGQGGQGTVFKGML------TDGRIVAVKKSKSVHESNV-EQFINEVVILSQINHRNVVK 200
+G+ G V+KG L + VA+K K E + E+F +E ++ +++ H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 201 LLGCCLETEVPLLVYEFILNG 221
LLG + + +++ + +G
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHG 114
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 31.6 bits (70), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 148 IGQGGQGTVFKGMLTD----GRI----VAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+GQG +FKG+ + G++ V +K H + E F ++S+++H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 200 KLLGCCLETEVPLLVYEFI 218
G C+ + +LV EF+
Sbjct: 76 LNYGVCVCGDENILVQEFV 94
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 122 NIISLLN 128
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 148 IGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+G G G V G VAVK K S ++F E + +++H +VK G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 208 TEVPLLVYEFILNG 221
+V E+I NG
Sbjct: 75 EYPIYIVTEYISNG 88
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
K +DNY V +G+G V + G+ +I+ KK + + ++ E I
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---LSARDFQKLEREARIC 82
Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
++ H N+V+L E LV++ + G
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
K +DNY V +G+G V + G+ +I+ KK + + ++ E I
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---LSARDFQKLEREARIC 58
Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
++ H N+V+L E LV++ + G
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 89
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
K +DNY V +G+G V + G+ +I+ KK + + ++ E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---LSARDFQKLEREARIC 59
Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
++ H N+V+L E LV++ + G
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
>pdb|1LMJ|A Chain A, Nmr Study Of The Fibrillin-1 Cbegf12-13 Pair Of Ca2+
Binding Epidermal Growth Factor-like Domains
Length = 86
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 11 FLLKKLRATDIDECLDKEKYHCEGK-CKNTIGSYTCDCPIG 50
F++ K DIDEC ++ C G C NT GSY C+CP G
Sbjct: 37 FMMMK-NCMDIDEC-QRDPLLCRGGVCHNTEGSYRCECPPG 75
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Query: 137 KATDNYKVSRIIGQGGQGTVFK------GMLTDGRIVAVKKSKSVHESNVEQFINEVVIL 190
K +DNY V +G+G V + G+ +I+ KK + + ++ E I
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK---LSARDFQKLEREARIC 59
Query: 191 SQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
++ H N+V+L E LV++ + G
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 78 NIISLLNV 85
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 77 NIISLLNV 84
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 83 NIISLLNV 90
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 78 NIISLLNV 85
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 85 NIISLLNV 92
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINH 195
+++K +I+G+G TV L R A+K K + E+ V E ++S+++H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 196 RNVVKLLGCCLETE 209
VKL C + E
Sbjct: 97 PFFVKLYFCFQDDE 110
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 94
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 122 NIISLLN 128
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.2 bits (69), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 85 NIISLLNV 92
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 77 NIISLLNV 84
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIISLLNV 91
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 24 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 83
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 116
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 93
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 94
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 148 IGQGGQGTVFKGML--TDGRIVAV-----KKSKSVHESNVEQFINEVVILSQINHRNVVK 200
+G G G V +G G+ V+V K ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 201 LLGCCLETEV 210
L G L +
Sbjct: 76 LYGVVLTPPM 85
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 94
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------ 185
K+ E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 186 EVVILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
EVV+L +++ V++LL + +L+ E
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE 93
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 148 IGQGGQGTVFKGML--TDGRIVAV-----KKSKSVHESNVEQFINEVVILSQINHRNVVK 200
+G G G V +G G+ V+V K ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 201 LLGCCLETEV 210
L G L +
Sbjct: 76 LYGVVLTPPM 85
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 148 IGQGGQGTVFKGML--TDGRIVAV-----KKSKSVHESNVEQFINEVVILSQINHRNVVK 200
+G G G V +G G+ V+V K ++ FI EV + ++HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 201 LLGCCLETEV 210
L G L +
Sbjct: 76 LYGVVLTPPM 85
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 148 IGQGGQGTVFKGML--TDGRIVAV-----KKSKSVHESNVEQFINEVVILSQINHRNVVK 200
+G G G V +G G+ V+V K ++ FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 201 LLGCCLETEV 210
L G L +
Sbjct: 80 LYGVVLTPPM 89
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 148 IGQGGQGTVFKGML--TDGRIVAV-----KKSKSVHESNVEQFINEVVILSQINHRNVVK 200
+G G G V +G G+ V+V K ++ FI EV + ++HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 201 LLGCCLETEV 210
L G L +
Sbjct: 80 LYGVVLTPPM 89
>pdb|2W86|A Chain A, Crystal Structure Of Fibrillin-1 Domains
Cbegf9hyb2cbegf10, Calcium Saturated Form
Length = 147
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 13 LKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGDG 55
+K + DIDEC G C NT GS+ C CP GM D
Sbjct: 99 IKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 18 ATDIDECLDKEKYHC-EGKCKNTIGSYTCDC 47
+ DIDEC E C G CKN+ GS+ C+C
Sbjct: 1 SADIDEC---ESSPCINGVCKNSPGSFICEC 28
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 78 NIIGLLN 84
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 89 NIIGLLN 95
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 142 YKVSR--IIGQGGQGTVFKGMLT-DGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
Y VS+ I+G G G V K T G +A K K+ + E+ NE+ +++Q++H N+
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL 148
Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
++L +LV E++ G
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGG 171
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 84 NIIGLLN 90
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLG 203
N++ LL
Sbjct: 84 NIIGLLN 90
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 85 NIIGLLNV 92
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|3P5B|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 400
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 31 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 71
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|1G1Q|A Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS
pdb|1G1Q|B Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS
pdb|1G1Q|C Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS
pdb|1G1Q|D Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS
pdb|1G1R|A Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS
Complexed With Slex
pdb|1G1R|B Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS
Complexed With Slex
pdb|1G1R|C Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS
Complexed With Slex
pdb|1G1R|D Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS
Complexed With Slex
pdb|1G1S|A Chain A, P-selectin Lectin/egf Domains Complexed With Psgl-1
Peptide
pdb|1G1S|B Chain B, P-selectin Lectin/egf Domains Complexed With Psgl-1
Peptide
Length = 162
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 33 EGKCKNTIGSYTCDCPIGMYG 53
+G+C TIG+YTC C G YG
Sbjct: 130 QGECLETIGNYTCSCYPGFYG 150
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 84 NIIGLLNV 91
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 142 YKVSRIIGQGGQGTV---FKGMLTDGRIVAVKK-SKSVH-ESNVEQFINEVVILSQINHR 196
Y+ + IG G QG V + +L R VA+KK S+ +++ ++ E+V++ +NH+
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 197 NVVKLLGC 204
N++ LL
Sbjct: 86 NIIGLLNV 93
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------EVV 188
E Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N EVV
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 189 ILSQIN--HRNVVKLLGCCLETEVPLLVYE 216
+L +++ V++LL + +L+ E
Sbjct: 63 LLKKVSSGFSGVIRLLDWFERPDSFVLILE 92
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
>pdb|1APQ|A Chain A, Structure Of The Egf-Like Module Of Human C1r, Nmr, 19
Structures
Length = 53
Score = 30.0 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
Query: 18 ATDIDECLDKEKY-------HCEGKCKNTIGSYTCDCPIG 50
A D+DEC + K C+ C N +G Y C C G
Sbjct: 1 AVDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPG 40
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 138 ATDNYKVSRIIGQGGQGTVFKGMLTDG-RIVAVKKSKSVHESNVE--QFINEVVILSQIN 194
DNY + +IG+G G V+ + + VA+KK + E ++ + + E+ IL+++
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 195 HRNVVKLLGCCLETEV 210
+++L + ++
Sbjct: 84 SDYIIRLYDLIIPDDL 99
>pdb|3P5C|L Chain L, The Structure Of The LdlrPCSK9 COMPLEX REVEALS THE
RECEPTOR IN AN Extended Conformation
Length = 440
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 71 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 111
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 10/108 (9%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSKS- 174
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 175 VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTD--GRI--VAVKKSK 173
+ + +L E D + + +G+G G V G+ D R+ VAVK K
Sbjct: 10 AGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK 69
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
S E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 70 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKG 126
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 126
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKG 126
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 124 IEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSKS- 174
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 175 VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLV 214
E ++ ++E+ ++ I H+N++ LLG C + + PL V
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYV 118
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLTD--GRI--VAVKKSKS-VHESNVEQFINE 186
E D + + +G+G G V G+ D R+ VAVK KS E ++ I+E
Sbjct: 24 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 83
Query: 187 VVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
VAVK KS E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 17 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 76
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLV 214
E ++ ++E+ ++ I H+N++ LLG C + + PL V
Sbjct: 77 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ-DGPLYV 118
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTD--GRI--VAVKKSK 173
+ + +L E D + + +G+G G V G+ D R+ VAVK K
Sbjct: 2 AGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK 61
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
S E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 62 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 111
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
VAVK KS E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 108
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
VAVK KS E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 119
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 167 VAVKKSKS-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
VAVK KS E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 160
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFK----GMLTD--GRI--VAVKKSK 173
+ + +L E D + + +G+G G V G+ D R+ VAVK K
Sbjct: 3 AGVSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK 62
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
S E ++ I+E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 63 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 112
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 136 EKATDNYKVSRIIGQGGQGTVFK----GMLTD--GRI--VAVKKSKS-VHESNVEQFINE 186
E D + + +G+G G V G+ D R+ VAVK KS E ++ I+E
Sbjct: 9 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68
Query: 187 VVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 104
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK------ 170
S + N ++F +L K +++G G GTV KG+ + +G + +
Sbjct: 16 PSEKANKVLARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVI 68
Query: 171 KSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
+ KS +S + + ++ + ++H ++V+LLG C
Sbjct: 69 EDKSGRQS-FQAVTDHMLAIGSLDHAHIVRLLGLC 102
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 118 SSNEGNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVH 176
S+ EG+ E L + ++ D ++G+G G V+ G L++ +A+K+
Sbjct: 4 STEEGDCESDLLEYDYEYDENGDRV----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERD 59
Query: 177 ESNVEQFINEVVILSQINHRNVVKLLGCCLE 207
+ E+ + + H+N+V+ LG E
Sbjct: 60 SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE 90
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 147 IIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
++G+G G V+ G L++ +A+K+ + E+ + + H+N+V+ LG
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 206 LE 207
E
Sbjct: 75 SE 76
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------EVVILSQI 193
Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 194 N--HRNVVKLLGCCLETEVPLLVYE 216
+ V++LL + +L+ E
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE 89
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 137 KATDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKS-KSVHESNVE-QFINEVVILSQI 193
K D ++V R+ GQG GTV G + G VA+KK + N E Q + ++ +L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--- 76
Query: 194 NHRNVVKL 201
+H N+V+L
Sbjct: 77 HHPNIVQL 84
>pdb|1FSB|A Chain A, Structure Of The Egf Domain Of P-Selectin, Nmr, 19
Structures
Length = 40
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 33 EGKCKNTIGSYTCDCPIGMYG 53
+G+C TIG+YTC C G YG
Sbjct: 12 QGECLETIGNYTCSCYPGFYG 32
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------EVVILSQI 193
Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 194 N--HRNVVKLLGCCLETEVPLLVYE 216
+ V++LL + +L+ E
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE 89
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 146 RIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFIN-EVVILSQINHRNVVKL 201
++IG G G VF+ L + VA+KK ++F N E+ I+ + H NVV L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKV-----LQDKRFKNRELQIMRIVKHPNVVDL 97
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFIN------EVVILSQI 193
Y+V ++G GG G+V+ G+ ++D VA+K + S+ + N EVV+L ++
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 194 N--HRNVVKLLGCCLETEVPLLVYE 216
+ V++LL + +L+ E
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILE 89
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 142 YKVSRIIGQGGQGTVFKG-MLTDGRIVAVKKSKSV--HESNVEQFINEVVILSQINHRNV 198
+++ ++G G G V+KG + G++ A+K E ++Q IN + S +HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS--HHRNI 83
Query: 199 VKLLGCCLETEVP------LLVYEF 217
G ++ P LV EF
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEF 108
>pdb|2VJ3|A Chain A, Human Notch-1 Egfs 11-13
Length = 135
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 18 ATDIDEC-LDKEKYHCEGKCKNTIGSYTCDCPIGMYG 53
A D+DEC L GKC NT+GS+ C C G G
Sbjct: 2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG 38
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 20 DIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYG 53
+ DEC H G+C + I + C+CP G G
Sbjct: 82 NTDECASSPCLH-NGRCLDKINEFQCECPTGFTG 114
>pdb|1SZB|A Chain A, Crystal Structure Of The Human Mbl-Associated Protein 19
(Map19)
pdb|1SZB|B Chain B, Crystal Structure Of The Human Mbl-Associated Protein 19
(Map19)
Length = 170
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 18 ATDIDEC--LDKEKYHCEGKCKNTIGSYTCDCPIG 50
A DIDEC E C+ C N +G + C C G
Sbjct: 121 AEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAG 155
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 180 VEQFINEVVILSQINHRNVVKLL 202
+EQ E+ IL +++H NVVKL+
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLV 102
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 140 DNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
D Y + +G G G V + + GR+ K + + + NE+ I++Q++H +
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 199 VKLLGCCLETEVPLLVYEFILNG 221
+ L + +L+ EF+ G
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGG 133
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 146 RIIGQGGQGTVFKGM-LTDGRIVAVK------KSKSVHESNVEQFINEVVILSQINHRNV 198
+++G G GTV KG+ + +G + + + KS +S + + ++ + ++H ++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS-FQAVTDHMLAIGSLDHAHI 77
Query: 199 VKLLGCC 205
V+LLG C
Sbjct: 78 VRLLGLC 84
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 6 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 65
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 66 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 115
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 164 GRIVAVKKSKS----VHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVK K+ H S +Q E+ IL + H +++K GCC
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCC 102
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 9 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 68
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 69 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 118
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 4 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 63
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 64 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 113
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 189 ILSQINHRNVVKLLGCCLETEVPLLVYEFILNG 221
+LS+I + V + G EVP VY FIL G
Sbjct: 233 LLSKIQYGGSVAVSGLTGGGEVPATVYPFILRG 265
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 164 GRIVAVKKSKS----VHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVK K+ H S +Q E+ IL + H +++K GCC
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCC 85
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 164 GRIVAVKKSKS----VHESNVEQFINEVVILSQINHRNVVKLLGCC 205
G +VAVK K+ H S +Q E+ IL + H +++K GCC
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEHIIKYKGCC 85
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 147 IIGQGGQGTVFKGMLTD-GRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVVKLLGCC 205
++G+G G K + G ++ +K+ E F+ EV ++ + H NV+K +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 206 LETEVPLLVYEFILNG 221
+ + + E+I G
Sbjct: 77 YKDKRLNFITEYIKGG 92
>pdb|3CFW|A Chain A, L-selectin Lectin And Egf Domains
Length = 164
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 33 EGKCKNTIGSYTCDCPIGMYG 53
G+C I +YTC+C +G YG
Sbjct: 130 HGECVEIINNYTCNCDVGYYG 150
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 141 NYKVSRIIGQGGQGTV--FKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNV 198
+Y + +G+GG V +G L DG A+K+ + + E+ E + NH N+
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 199 VKLLGCCL 206
++L+ CL
Sbjct: 89 LRLVAYCL 96
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVS-RIIGQGGQGT-VFKGMLTDGRIVAVKK 171
K+++ + E++ N VS +I+G G GT VF+G GR VAVK+
Sbjct: 18 KSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKR 64
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 126 KTKLFTSKDLEKATDNYKVS-RIIGQGGQGT-VFKGMLTDGRIVAVKK 171
K+++ + E++ N VS +I+G G GT VF+G GR VAVK+
Sbjct: 18 KSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKR 64
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
TD Y++ +G+G V + M + G+ A K +K + + ++ E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
N+V+L E LV++ + G
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG 88
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 10/110 (9%)
Query: 122 GNIEKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVF--------KGMLTDGRIVAVKKSK 173
+ + +L E D + + +G+G G V K + VAVK K
Sbjct: 63 AGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK 122
Query: 174 S-VHESNVEQFINEVVILSQI-NHRNVVKLLGCCLETEVPLLVYEFILNG 221
E ++ ++E+ ++ I H+N++ LLG C + ++ E+ G
Sbjct: 123 DDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKG 172
>pdb|2W2M|E Chain E, Wt Pcsk9-Deltac Bound To Wt Egf-A Of Ldlr
pdb|2W2O|E Chain E, Pcsk9-deltac D374y Mutant Bound To Wt Egf-a Of Ldlr
pdb|2W2P|E Chain E, Pcsk9-Deltac D374a Mutant Bound To Wt Egf-A Of Ldlr
pdb|2W2Q|E Chain E, Pcsk9-Deltac D374h Mutant Bound To Wt Egf-A Of Ldlr
Length = 107
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGM 51
L+ + R DIDEC D + C C N G Y C C G
Sbjct: 60 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGF 97
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
TD Y++ +G+G V + M + G+ A K +K + + ++ E I + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
N+V+L E LV++ + G
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGG 88
>pdb|2W2N|E Chain E, Wt Pcsk9-Deltac Bound To Egf-A H306y Mutant Of Ldlr
Length = 107
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGM 51
L+ + R DIDEC D + C C N G Y C C G
Sbjct: 60 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGF 97
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 141 NYKVSRIIGQGGQGTV-FKGMLTDGRIVAVK---KSKSVHESNVEQFINEVVILSQINHR 196
++++ R +G G G V +GR A+K K V VE +E ++LS + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 197 NVVKLLGCCLETEVPLLVYEFILNG 221
++++ G + + ++ ++I G
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGG 91
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+ Y ++ +G+G G V + + T + + K V ++ E+ IL+ HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 200 KLLGCCLETEVPLLVYEFI 218
L E ++++EFI
Sbjct: 65 HLHESFESMEELVMIFEFI 83
>pdb|1HZ8|A Chain A, Solution Structure And Backbone Dynamics Of A Concatemer
Of Egf-Homology Modules Of The Human Low Density
Lipoprotein Receptor
pdb|1I0U|A Chain A, Solution Structure And Backbone Dynamics Of A Concatemer
Of Egf-Homology Modules Of The Human Low Density
Lipoprotein Receptor
Length = 82
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 33 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 73
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR---IVAVK-KSKSVHESNVEQFINEVV 188
K E D Y ++G G V + D R +VA+K +K E NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 189 ILSQINHRNVVKL 201
+L +I H N+V L
Sbjct: 69 VLHKIKHPNIVAL 81
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+YKV R IG+G G +F+G L + + VA+K S+ Q +E
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEY---------RTY 58
Query: 200 KLLGCCLETEVPLLVY 215
KLL C T +P + Y
Sbjct: 59 KLLAGC--TGIPNVYY 72
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 14/76 (18%)
Query: 141 NYKVSRIIGQGGQGTVFKGM-LTDGRIVAVKKSKSVHESNVEQFINEVVILSQINHRNVV 199
+YKV R IG+G G +F+G L + + VA+K S+ Q +E
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP--RRSDAPQLRDEY---------RTY 59
Query: 200 KLLGCCLETEVPLLVY 215
KLL C T +P + Y
Sbjct: 60 KLLAGC--TGIPNVYY 73
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK--KSKSVHESNVEQF-INEVVILSQIN 194
+++ V RIIG+GG G V+ D G++ A+K K + E +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 27.3 bits (59), Expect = 6.6, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK--KSKSVHESNVEQF-INEVVILSQIN 194
+++ V RIIG+GG G V+ D G++ A+K K + E +NE ++LS ++
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
>pdb|3GCW|E Chain E, Pcsk9:egfa(H306y)
Length = 83
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGM 51
L+ + R DIDEC D + C C N G Y C C G
Sbjct: 36 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGF 73
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR-IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
D+Y++ +IG G V + VA+K+ ++++++ + E+ +SQ +H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 198 VV 199
+V
Sbjct: 75 IV 76
>pdb|1HJ7|A Chain A, Nmr Study Of A Pair Of Ldl Receptor Ca2+ Binding
Epidermal Growth Factor-Like Domains, 20 Structures
Length = 80
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGMYGD 54
L+ + R DIDEC D + C C N G Y C C G D
Sbjct: 33 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGFQLD 73
>pdb|3BPS|E Chain E, Pcsk9:egf-a Complex
pdb|3GCX|E Chain E, Pcsk9:egfa (Ph 7.4)
Length = 83
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 12 LLKKLRATDIDECLDKEKYHCEGKCKNTIGSYTCDCPIGM 51
L+ + R DIDEC D + C C N G Y C C G
Sbjct: 36 LVAQRRCEDIDECQDPDT--CSQLCVNLEGGYKCQCEEGF 73
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK--KSKSVHESNVEQF-INEVVILSQIN 194
+++ V RIIG+GG G V+ D G++ A+K K + E +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 27.3 bits (59), Expect = 6.9, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTD-GRIVAVK--KSKSVHESNVEQF-INEVVILSQIN 194
+++ V RIIG+GG G V+ D G++ A+K K + E +NE ++LS ++
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 140 DNYKVSRIIGQGGQGTVFKGMLTDGR-IVAVKKSKSVH-ESNVEQFINEVVILSQINHRN 197
D+Y++ +IG G V + VA+K+ ++++++ + E+ +SQ +H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 198 VV 199
+V
Sbjct: 70 IV 71
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR---IVAVK-KSKSVHESNVEQFINEVV 188
K E D Y ++G G V + D R +VA+K +K E NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 189 ILSQINHRNVVKL 201
+L +I H N+V L
Sbjct: 69 VLHKIKHPNIVAL 81
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 164 GRIVAVKKSKSVHESN-VEQFINEVVILSQINHRNVVKLLGCCLE 207
G VAVK K N + E+ IL + H N+VK G C E
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE 94
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 164 GRIVAVKKSKSVHESN-VEQFINEVVILSQINHRNVVKLLGCCLE 207
G VAVK K N + E+ IL + H N+VK G C E
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTE 82
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR---IVAVK-KSKSVHESNVEQFINEVV 188
K E D Y ++G G V + D R +VA+K +K E NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIA 68
Query: 189 ILSQINHRNVVKL 201
+L +I H N+V L
Sbjct: 69 VLHKIKHPNIVAL 81
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 26.9 bits (58), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 139 TDNYKVSRIIGQGGQGTVFKGM-LTDGRIVAVK--KSKSVHESNVEQFINEVVILSQINH 195
TD Y++ IG+G V + + L G A K +K + + ++ E I + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 196 RNVVKLLGCCLETEVPLLVYEFILNG 221
N+V+L E LV++ + G
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGG 88
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 133 KDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGR---IVAVK-KSKSVHESNVEQFINEVV 188
K E D Y ++G G V + D R +VA+K +K E NE+
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIA 68
Query: 189 ILSQINHRNVVKL 201
+L +I H N+V L
Sbjct: 69 VLHKIKHPNIVAL 81
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 146 RIIGQGGQGTVFK-GMLTDGRIVAVKKSKSVHESNVEQFINEVV---ILSQINHRNVVKL 201
R++G+GG G VF M G++ A KK + + +V IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 202 LGCCLETEVPLLVYEFILNG 221
L ET+ L + I+NG
Sbjct: 250 LAYAFETKTDLCLVMTIMNG 269
>pdb|1WHE|A Chain A, Coagulation Factor, Nmr, 20 Structures
pdb|1WHF|A Chain A, Coagulation Factor, Nmr, 15 Structures
Length = 86
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 20 DIDECLDKEKYHC--EGKCKNTIGSYTCDCPIGMYG 53
D D+C E + C +G CK IG YTC C G G
Sbjct: 46 DGDQC---EGHPCLNQGHCKXGIGDYTCTCAEGFEG 78
>pdb|1TOZ|A Chain A, Nmr Structure Of The Human Notch-1 Ligand Binding Region
Length = 116
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 20 DIDEC-LDKEKYHCEGKCKNTIGSYTCDCPIGMYG 53
D+DEC L GKC NT+GS+ C C G G
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG 36
>pdb|1EDM|B Chain B, Epidermal Growth Factor-Like Domain From Human Factor Ix
pdb|1EDM|C Chain C, Epidermal Growth Factor-Like Domain From Human Factor Ix
pdb|1IXA|A Chain A, The Three-Dimensional Structure Of The First Egf-Like
Module Of Human Factor Ix: Comparison With Egf And
Tgf-A
Length = 39
Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 34 GKCKNTIGSYTCDCPIGMYG 53
G CK+ I SY C CP G G
Sbjct: 15 GSCKDDINSYECWCPFGFEG 34
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 146 RIIGQGGQGTVFK-GMLTDGRIVAVKKSKSVHESNVEQFINEVV---ILSQINHRNVVKL 201
R++G+GG G VF M G++ A KK + + +V IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 202 LGCCLETEVPLLVYEFILNG 221
L ET+ L + I+NG
Sbjct: 250 LAYAFETKTDLCLVMTIMNG 269
>pdb|2YL2|A Chain A, Crystal Structure Of Human Acetyl-Coa Carboxylase 1,
Biotin Carboxylase (Bc) Domain
pdb|2YL2|B Chain B, Crystal Structure Of Human Acetyl-Coa Carboxylase 1,
Biotin Carboxylase (Bc) Domain
Length = 540
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 125 EKTKLFTSKDLEKATDNYKVSRIIGQGGQGTVFKGMLTDGRIVAVKKSKSVHESNVEQFI 184
++ K+ + +D A+ V+R GG + K ++ + I AVK +S+ + E F
Sbjct: 13 DRKKIDSQRDFTVASPAEFVTRF---GGNKVIEKVLIANNGIAAVKCMRSIRRWSYEMFR 69
Query: 185 NEVVI 189
NE I
Sbjct: 70 NERAI 74
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 146 RIIGQGGQGTVFK-GMLTDGRIVAVKKSKSVHESNVEQFINEVV---ILSQINHRNVVKL 201
R++G+GG G VF M G++ A KK + + +V IL++++ R +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVS- 249
Query: 202 LGCCLETEVPLLVYEFILNG 221
L ET+ L + I+NG
Sbjct: 250 LAYAFETKTDLCLVMTIMNG 269
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,255,614
Number of Sequences: 62578
Number of extensions: 180000
Number of successful extensions: 1302
Number of sequences better than 100.0: 620
Number of HSP's better than 100.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 264
Number of HSP's that attempted gapping in prelim test: 849
Number of HSP's gapped (non-prelim): 631
length of query: 221
length of database: 14,973,337
effective HSP length: 95
effective length of query: 126
effective length of database: 9,028,427
effective search space: 1137581802
effective search space used: 1137581802
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)