BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036178
(330 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDR0|DOF54_ARATH Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4
PE=2 SV=2
Length = 307
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 139/318 (43%), Positives = 170/318 (53%), Gaps = 50/318 (15%)
Query: 19 DRRLRPHPHQ---NHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 75
DRR+R H + +HQ+LKCPRC+SLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN
Sbjct: 34 DRRMRAHQNNILNHHQSLKCPRCNSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 93
Query: 76 VPVGGGCRKTKRSSKPKPNSESSAQTQTQTQTEAPAAGERDRKANSHSSSESSSTLTVTN 135
VPVGGGCRK KRS + S SSA T TQ D SS+ S S+ ++
Sbjct: 94 VPVGGGCRKAKRSKTKQVPSSSSADKPTTTQD--------DHHVEEKSSTGSHSSSESSS 145
Query: 136 NNNNNNNTSVETVSVHSSSSVSNVLSAMNNNNNNNNNDPGFETAPTTALLDQASSDCGIF 195
+N+ T ++ S+V+ + N + G E + LL Q SS G+F
Sbjct: 146 LTASNSTTVAAVSVTAAAEVASSVIPGFDMPNMKIYGN-GIEWS---TLLGQGSSAGGVF 201
Query: 196 SEIGSFTSLITSSNEALPFGFSNLLNNAQQNLEHVQNEQQWQQEQQKLASASSMGGHHEL 255
SEIG F ++ S+ E PFGF N +H++ E + Q+QQ
Sbjct: 202 SEIGGFPAV--SAIETTPFGFGGKFVNQD---DHLKLEGETVQQQQ-------------- 242
Query: 256 KLHEMASGLLDQTVHDELSALQDRSGNTG-GFGSLDWHGSADHQGLFDLPNAVDHASYWS 314
D+T E Q RS + GF LDW Q LFDL + VDHA YWS
Sbjct: 243 --------FGDRTAQVEF---QGRSSDPNMGFEPLDWGSGGGDQTLFDLTSTVDHA-YWS 290
Query: 315 QSTQWT--DQDHPSLYLP 330
QS QWT DQD LYLP
Sbjct: 291 QS-QWTSSDQDQSGLYLP 307
>sp|Q9LSL6|DOF57_ARATH Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7
PE=2 SV=1
Length = 316
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 59/64 (92%)
Query: 28 QNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKR 87
Q+ Q LKCPRC+S NTKFCYYNNY+LSQPRHFCK+CRRYWT+GG LRNVP+GGGCRKTK+
Sbjct: 36 QDQQNLKCPRCNSPNTKFCYYNNYSLSQPRHFCKSCRRYWTRGGALRNVPIGGGCRKTKK 95
Query: 88 SSKP 91
S KP
Sbjct: 96 SIKP 99
>sp|O24463|PBF_MAIZE Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1
Length = 328
Score = 128 bits (321), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%), Gaps = 3/76 (3%)
Query: 15 GGGGDRRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLR 74
GG G+R+ RP Q +ALKCPRCDS NTKFCYYNNY++SQPR+FCK CRRYWT GG LR
Sbjct: 45 GGSGERKPRP---QLPEALKCPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLR 101
Query: 75 NVPVGGGCRKTKRSSK 90
NVP+GGGCRK K +S+
Sbjct: 102 NVPIGGGCRKNKHASR 117
>sp|Q84TE9|DOF53_ARATH Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana GN=DOF5.3
PE=2 SV=1
Length = 257
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
Query: 23 RPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGC 82
RP P + AL+CPRCDS NTKFCYYNNY+L+QPR+FCK+CRRYWTKGG LRN+PVGGGC
Sbjct: 47 RPQPPE--LALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGC 104
Query: 83 RKTKRSS 89
RK KRS+
Sbjct: 105 RKNKRST 111
>sp|O82155|DOF17_ARATH Dof zinc finger protein DOF1.7 OS=Arabidopsis thaliana GN=DOF1.7
PE=2 SV=1
Length = 194
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 30 HQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 89
+ LKCPRCDS NTKFCYYNNYNLSQPRHFCKNCRRYWTKGG LRN+PVGGG RK+ + S
Sbjct: 30 QEQLKCPRCDSPNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGTRKSNKRS 89
Query: 90 KPKPNSESSAQTQTQTQTEAP 110
P S+ + QT E P
Sbjct: 90 GSSP----SSNLKNQTVAEKP 106
>sp|Q9M1E6|DOF32_ARATH Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2
PE=2 SV=1
Length = 245
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 50/67 (74%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
Query: 23 RPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGC 82
RP P + Q+L+CPRCDS NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG+LRN+P+GG
Sbjct: 32 RPAPPE--QSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAY 89
Query: 83 RKTKRSS 89
RK KRSS
Sbjct: 90 RKHKRSS 96
>sp|Q8L9V6|DOF11_ARATH Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana GN=DOF1.1
PE=1 SV=2
Length = 331
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 33 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK 90
LKCPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT+GG LRNVPVGGGCR+ + K
Sbjct: 77 LKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGK 134
>sp|Q9ZV33|DOF22_ARATH Dof zinc finger protein DOF2.2 OS=Arabidopsis thaliana GN=DOF2.2
PE=2 SV=2
Length = 340
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 46/53 (86%), Positives = 50/53 (94%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK 84
ALKCPRCDS NTKFCY+NNYNL+QPRHFCK CRRYWT+GG LRNVPVGGGCR+
Sbjct: 93 ALKCPRCDSANTKFCYFNNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRR 145
>sp|Q9FM03|DOF56_ARATH Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana GN=DOF5.6
PE=2 SV=2
Length = 372
Score = 118 bits (295), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 57/66 (86%), Gaps = 3/66 (4%)
Query: 18 GDRRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVP 77
G RRLRP PH + Q KCPRC+S +TKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN+P
Sbjct: 61 GGRRLRP-PHDHPQ--KCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIP 117
Query: 78 VGGGCR 83
VGGGCR
Sbjct: 118 VGGGCR 123
>sp|O80928|DOF24_ARATH Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana GN=DOF2.4
PE=2 SV=1
Length = 330
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 45/57 (78%), Positives = 53/57 (92%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRS 88
ALKCPRC+S NTKFCY+NNY+L+QPRHFCK CRRYWT+GG LRNVPVGGGCR+ +R+
Sbjct: 88 ALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRT 144
>sp|Q8LAP8|DOF46_ARATH Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana GN=DOF4.6
PE=2 SV=2
Length = 342
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 3/92 (3%)
Query: 17 GGDRRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNV 76
GG+R+ RP + QA+ CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRN+
Sbjct: 40 GGERKARP---EKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNI 96
Query: 77 PVGGGCRKTKRSSKPKPNSESSAQTQTQTQTE 108
PVGGG RK KRS + ++ TQ T+
Sbjct: 97 PVGGGSRKNKRSHSSSSDISNNHSDSTQPATK 128
>sp|Q8LE43|DOF21_ARATH Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana GN=DOF2.1
PE=2 SV=2
Length = 288
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 48/59 (81%), Positives = 54/59 (91%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 89
+A CPRC+S NTKFCYYNNY+LSQPR+FCK+CRRYWTKGG LRNVPVGGGCR+ KRSS
Sbjct: 46 EAQNCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKRSS 104
>sp|Q94AR6|DOF31_ARATH Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1
PE=2 SV=2
Length = 204
Score = 115 bits (287), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/57 (89%), Positives = 52/57 (91%), Gaps = 2/57 (3%)
Query: 33 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRK--TKR 87
LKCPRCDS NTKFCYYNNYNLSQPRHFCK+CRRYWTKGG LRNVPVGGG RK TKR
Sbjct: 29 LKCPRCDSPNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGALRNVPVGGGSRKNATKR 85
>sp|Q9FZA4|DOF14_ARATH Dof zinc finger protein DOF1.4 OS=Arabidopsis thaliana GN=DOF1.4
PE=2 SV=1
Length = 311
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 47/59 (79%), Positives = 51/59 (86%)
Query: 33 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKP 91
LKCPRCDS NTKFCYYNNY+LSQPRHFCK C+RYWT+GG LRNVPVGG RK KR +P
Sbjct: 27 LKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKRP 85
>sp|Q9M2U1|DOF36_ARATH Dof zinc finger protein DOF3.6 OS=Arabidopsis thaliana GN=DOF3.6
PE=1 SV=2
Length = 323
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 46/57 (80%), Positives = 51/57 (89%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRS 88
AL CPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GG LRNVPVGGG R+ KRS
Sbjct: 75 ALNCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGSLRNVPVGGGFRRNKRS 131
>sp|Q9SVC5|DOF35_ARATH Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana GN=DOF3.5
PE=3 SV=1
Length = 247
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Query: 23 RPHPHQNHQALK-CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGG 81
RP+ + N + CPRC S NTKFCYYNNY+L+QPR+FCK CRRYWTKGG LRNVPVGGG
Sbjct: 14 RPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGG 73
Query: 82 CRKTKRSSKPKPNSESSAQTQTQTQTEAPAAG 113
CRK++R PK +S ++ +T + P G
Sbjct: 74 CRKSRR---PKSSSGNNTKTSLTANSGNPGGG 102
>sp|Q43385|DOF37_ARATH Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7
PE=1 SV=2
Length = 296
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 5/72 (6%)
Query: 20 RRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVG 79
R+ RP + + CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVG
Sbjct: 66 RKARPQ-----EKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVG 120
Query: 80 GGCRKTKRSSKP 91
G RK KRSS P
Sbjct: 121 GSSRKNKRSSTP 132
>sp|P68349|DOF12_ARATH Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2
PE=2 SV=1
Length = 260
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 50/59 (84%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK 90
A CPRC S NTKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN+PVGGGCRK RS +
Sbjct: 37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQ 95
>sp|Q84K52|DOF47_ARATH Dof zinc finger protein DOF4.7 OS=Arabidopsis thaliana GN=DOF4.7
PE=2 SV=1
Length = 246
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 48/52 (92%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCR 83
LKCPRCDS+NTKFCYYNNY+LSQPRH+CKNCRRYWT+GG LRNVP+GG R
Sbjct: 40 VLKCPRCDSVNTKFCYYNNYSLSQPRHYCKNCRRYWTRGGALRNVPIGGSTR 91
>sp|Q39088|DOF34_ARATH Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana GN=DOF3.4
PE=1 SV=2
Length = 253
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/60 (75%), Positives = 50/60 (83%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK 90
+ L CPRCDS NTKFCYYNNYN SQPRHFCK CRRYWT GG LR+VPVGGG RK+ + S+
Sbjct: 28 EQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSR 87
>sp|Q84JQ8|DOF18_ARATH Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana GN=DOF1.8
PE=2 SV=1
Length = 352
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 54/64 (84%), Gaps = 3/64 (4%)
Query: 19 DRRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPV 78
+R+ RP + QAL CPRC+SLNTKFCYYNNY+L+QPR+FCK+CRRYWT GG LRN+PV
Sbjct: 38 ERKARP---EKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPV 94
Query: 79 GGGC 82
GGG
Sbjct: 95 GGGV 98
>sp|Q9FGD6|DOF58_ARATH Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8
PE=2 SV=1
Length = 225
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 51/65 (78%)
Query: 26 PHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKT 85
P + L CPRC+S NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR++PVGG RK+
Sbjct: 25 PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKS 84
Query: 86 KRSSK 90
+ S+
Sbjct: 85 SKRSR 89
>sp|Q9SUA9|DOF44_ARATH Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4
PE=3 SV=1
Length = 210
Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 51/65 (78%), Gaps = 5/65 (7%)
Query: 23 RPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGC 82
RP P + CPRCDS NTKFC+YNNY+ SQPR+FCKNCRRYWT GG LRN+PVGG C
Sbjct: 19 RPPPSR-----VCPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSC 73
Query: 83 RKTKR 87
RK KR
Sbjct: 74 RKPKR 78
>sp|Q8LFV3|CDF3_ARATH Cyclic dof factor 3 OS=Arabidopsis thaliana GN=CDF3 PE=1 SV=2
Length = 448
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 48/59 (81%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 89
+ L CPRC S+ TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K SS
Sbjct: 108 KILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSS 166
>sp|P38564|MNB1A_MAIZE Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2
Length = 238
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 35 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPN 94
CPRC S +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRNVPVGGG RK SS +
Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSSSSSSSS 108
Query: 95 SESSAQTQTQTQTEAPAAGER 115
++A Q + + PA+ +R
Sbjct: 109 YVAAADADRQPKKK-PASKKR 128
>sp|Q93ZL5|CDF2_ARATH Cyclic dof factor 2 OS=Arabidopsis thaliana GN=CDF2 PE=1 SV=2
Length = 457
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 47/56 (83%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 86
+ L CPRC+S+ TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K
Sbjct: 136 KILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNK 191
>sp|Q9ZPY0|DOF25_ARATH Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5
PE=2 SV=3
Length = 369
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 50/63 (79%), Gaps = 5/63 (7%)
Query: 18 GDRRLRPHPHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVP 77
+R+ RP + L CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVP
Sbjct: 70 AERKARPQ-----EKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVP 124
Query: 78 VGG 80
VGG
Sbjct: 125 VGG 127
>sp|Q9LZ56|DOF51_ARATH Dof zinc finger protein DOF5.1 OS=Arabidopsis thaliana GN=DOF5.1
PE=2 SV=1
Length = 399
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 59/98 (60%), Gaps = 17/98 (17%)
Query: 32 ALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKP 91
ALKCPRCDS NTKFCY+NNY+L+QPRHFCK CRRYWT+GG LR+VPVGGGCR+ KR+
Sbjct: 94 ALKCPRCDSTNTKFCYFNNYSLTQPRHFCKACRRYWTRGGALRSVPVGGGCRRNKRTKNS 153
Query: 92 KPNSESSAQTQTQTQTEAPAAGERDRKANSHSSSESSS 129
S + S ++S
Sbjct: 154 SGGGGGSTSSGNSK-----------------SQDSATS 174
>sp|Q9M161|DOF41_ARATH Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1
PE=2 SV=2
Length = 294
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/57 (73%), Positives = 49/57 (85%)
Query: 35 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKP 91
CPRC+S NTKFCYYNNY+L+QPR+ CK+CRRYWT+GG LRNVPVGGG RK K+ P
Sbjct: 70 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKKLPFP 126
>sp|Q9SEZ3|CDF5_ARATH Cyclic dof factor 5 OS=Arabidopsis thaliana GN=CDF5 PE=2 SV=1
Length = 399
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 48/56 (85%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 86
+ + CPRC+S NTKFCYYNNYN++QPR+FC+NC+RYWT GG +RNVPVG G RK K
Sbjct: 130 KLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSGRRKNK 185
>sp|Q8W1E3|CDF1_ARATH Cyclic dof factor 1 OS=Arabidopsis thaliana GN=CDF1 PE=1 SV=2
Length = 298
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK 90
+ L CPRC+S+ TKFCYYNNYN++QPRHFCK C+RYWT GG +R+VP+G G RK K +S
Sbjct: 52 KILPCPRCNSMETKFCYYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNS- 110
Query: 91 PKPNSESSAQTQTQTQTEAPAAGERDRKANSHSSSESSSTLTVTNNNN-NNNNTS 144
P + ++T + + G+ D+K +S+ + NN+ +NNNTS
Sbjct: 111 PTSHYHHVTISETNGPVLSFSLGD-DQKVSSNRFGNQKLVARIENNDERSNNNTS 164
>sp|P68350|DOF15_ARATH Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana GN=DOF1.5
PE=1 SV=1
Length = 175
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 47/56 (83%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 86
+ + CPRC S+ TKFCY+NNYN++QPRHFCK C+RYWT GG LRNVPVG G RK+K
Sbjct: 60 KIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSK 115
>sp|O22967|CDF4_ARATH Cyclic dof factor 4 OS=Arabidopsis thaliana GN=CDF4 PE=2 SV=1
Length = 170
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 86
+ + CPRC S+ TKFCY+NNYN++QPRHFCK C RYWT GG LRNVPVG G RK+K
Sbjct: 56 KIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSK 111
>sp|Q9SX97|DOF16_ARATH Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6
PE=2 SV=1
Length = 209
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%), Gaps = 5/66 (7%)
Query: 21 RLRP----HPHQN-HQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRN 75
R++P +P N + L CPRC+S TKFCYYNNYNL+QPR++CK+CRRYWT+GG LR+
Sbjct: 12 RVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRD 71
Query: 76 VPVGGG 81
VPVGGG
Sbjct: 72 VPVGGG 77
>sp|Q9LQX4|DOF13_ARATH Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana GN=DOF1.3
PE=2 SV=1
Length = 366
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 31 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 86
+ L CPRC+S +TKFCYYNNYN++QPRHFC+ C+RYWT GG +R VPVG G RK K
Sbjct: 103 KILPCPRCNSADTKFCYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNK 158
>sp|O49550|DOF45_ARATH Dof zinc finger protein DOF4.5 OS=Arabidopsis thaliana GN=DOF4.5
PE=3 SV=1
Length = 249
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 35 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPN 94
C RCDS NTKFCYYNNY QPR+FCKNCRRYWT GG LRN+P+GG R KR+ +P+
Sbjct: 27 CARCDSDNTKFCYYNNYCEFQPRYFCKNCRRYWTHGGALRNIPIGGSSR-AKRARVNQPS 85
Query: 95 SESSAQTQTQTQTEAP 110
+TQ P
Sbjct: 86 VARMVSVETQRGNNQP 101
>sp|Q9SUB0|DOF43_ARATH Dof zinc finger protein DOF4.3 OS=Arabidopsis thaliana GN=DOF4.3
PE=3 SV=1
Length = 232
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 35 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPN 94
C RCDS NTKFCYYNNY+ QPR+FCKNCRRYWT GG LRNVP+GG R KR+ +P+
Sbjct: 27 CARCDSDNTKFCYYNNYSEFQPRYFCKNCRRYWTHGGALRNVPIGGSSR-AKRTRINQPS 85
Query: 95 SESSAQTQTQTQTEAP 110
Q + P
Sbjct: 86 VAQMVSVGIQPGSHKP 101
>sp|Q9SUB1|DOF42_ARATH Dof zinc finger protein DOF4.2 OS=Arabidopsis thaliana GN=DOF4.2
PE=3 SV=1
Length = 194
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 35 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPN 94
CPRC S T+F Y+NN SQPR+ CKNC R WT GGVLRN+PV G C K S+ PK +
Sbjct: 23 CPRCYSDQTRFSYFNNNKKSQPRYKCKNCCRCWTHGGVLRNIPVTGICDK---SNLPKID 79
Query: 95 SESSAQT 101
S +Q
Sbjct: 80 QSSVSQM 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.125 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,386,856
Number of Sequences: 539616
Number of extensions: 5567669
Number of successful extensions: 158327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 789
Number of HSP's that attempted gapping in prelim test: 35144
Number of HSP's gapped (non-prelim): 42687
length of query: 330
length of database: 191,569,459
effective HSP length: 118
effective length of query: 212
effective length of database: 127,894,771
effective search space: 27113691452
effective search space used: 27113691452
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)