Query 036180
Match_columns 325
No_of_seqs 197 out of 1465
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 10:13:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036180.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036180hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1054 Predicted sulfurtransf 100.0 8.4E-66 1.8E-70 488.9 16.0 187 91-325 2-189 (308)
2 PRK01415 hypothetical protein; 100.0 9E-57 1.9E-61 419.1 16.7 186 92-325 3-188 (247)
3 PRK05320 rhodanese superfamily 100.0 2.1E-50 4.7E-55 376.7 15.2 185 93-325 2-192 (257)
4 PRK00142 putative rhodanese-re 100.0 7.3E-45 1.6E-49 347.9 17.2 185 93-325 3-188 (314)
5 cd01518 RHOD_YceA Member of th 99.6 3.2E-16 6.9E-21 124.4 5.4 77 222-324 1-77 (101)
6 cd01523 RHOD_Lact_B Member of 99.4 2.8E-13 6E-18 107.1 4.9 75 225-324 1-77 (100)
7 cd01533 4RHOD_Repeat_2 Member 99.3 6.6E-13 1.4E-17 106.9 3.7 74 221-324 8-82 (109)
8 cd01534 4RHOD_Repeat_3 Member 99.3 9.2E-13 2E-17 103.7 3.6 70 225-324 1-72 (95)
9 cd01519 RHOD_HSP67B2 Member of 99.3 1.7E-12 3.7E-17 102.8 3.7 76 226-324 2-82 (106)
10 PRK00162 glpE thiosulfate sulf 99.3 1.8E-12 3.8E-17 104.3 3.1 71 222-324 4-74 (108)
11 cd01522 RHOD_1 Member of the R 99.3 2.9E-12 6.2E-17 105.6 4.4 75 225-324 1-80 (117)
12 cd01520 RHOD_YbbB Member of th 99.3 3.9E-12 8.5E-17 106.1 5.2 41 225-266 1-41 (128)
13 cd01526 RHOD_ThiF Member of th 99.3 3.8E-12 8.2E-17 105.0 4.7 81 222-324 7-88 (122)
14 cd01443 Cdc25_Acr2p Cdc25 enzy 99.3 3.6E-12 7.9E-17 103.6 4.3 75 223-324 2-83 (113)
15 cd01528 RHOD_2 Member of the R 99.3 3.2E-12 6.9E-17 101.5 3.8 72 224-324 1-74 (101)
16 cd01531 Acr2p Eukaryotic arsen 99.3 4.2E-12 9E-17 103.1 4.2 75 223-324 2-79 (113)
17 cd01444 GlpE_ST GlpE sulfurtra 99.2 3.5E-12 7.7E-17 99.0 3.1 69 224-324 1-72 (96)
18 cd01449 TST_Repeat_2 Thiosulfa 99.2 5.7E-12 1.2E-16 101.8 4.3 77 225-324 1-94 (118)
19 cd01524 RHOD_Pyr_redox Member 99.2 6.7E-12 1.5E-16 97.9 2.8 67 225-324 1-67 (90)
20 cd01447 Polysulfide_ST Polysul 99.2 1.6E-11 3.6E-16 96.2 4.6 76 225-324 1-77 (103)
21 cd01525 RHOD_Kc Member of the 99.2 2.8E-11 6.1E-16 95.8 4.9 78 225-323 1-80 (105)
22 cd01527 RHOD_YgaP Member of th 99.2 2E-11 4.4E-16 96.1 4.0 68 223-323 2-69 (99)
23 cd01529 4RHOD_Repeats Member o 99.1 3.1E-11 6.7E-16 95.0 4.0 63 236-324 10-72 (96)
24 cd01530 Cdc25 Cdc25 phosphatas 99.1 4.9E-11 1.1E-15 99.4 4.1 76 223-324 2-85 (121)
25 PF00581 Rhodanese: Rhodanese- 99.1 4.5E-11 9.8E-16 93.7 2.9 41 226-266 1-41 (113)
26 PLN02160 thiosulfate sulfurtra 99.1 1.3E-10 2.9E-15 99.0 5.4 77 222-324 14-97 (136)
27 cd01521 RHOD_PspE2 Member of t 99.0 1.6E-10 3.5E-15 93.5 4.0 47 221-267 6-54 (110)
28 cd01448 TST_Repeat_1 Thiosulfa 99.0 6E-10 1.3E-14 90.8 5.2 44 225-268 2-52 (122)
29 COG0607 PspE Rhodanese-related 99.0 7.3E-10 1.6E-14 87.4 4.6 68 227-324 9-77 (110)
30 KOG1530 Rhodanese-related sulf 98.9 5.8E-10 1.3E-14 96.7 3.6 85 222-325 22-106 (136)
31 smart00450 RHOD Rhodanese Homo 98.9 1E-09 2.2E-14 83.1 3.2 66 236-324 2-72 (100)
32 PRK07411 hypothetical protein; 98.9 1E-09 2.3E-14 108.4 4.0 76 222-324 281-358 (390)
33 cd01532 4RHOD_Repeat_1 Member 98.8 2.4E-09 5.3E-14 84.3 4.1 60 232-321 4-63 (92)
34 PRK05600 thiamine biosynthesis 98.8 2.2E-09 4.7E-14 105.7 4.0 75 223-324 271-348 (370)
35 TIGR03865 PQQ_CXXCW PQQ-depend 98.8 6.3E-09 1.4E-13 91.4 5.7 86 220-324 33-133 (162)
36 PRK07878 molybdopterin biosynt 98.8 5.3E-09 1.1E-13 103.3 4.7 74 221-324 285-359 (392)
37 PRK08762 molybdopterin biosynt 98.8 2.9E-09 6.2E-14 104.2 2.8 71 223-324 3-73 (376)
38 cd00158 RHOD Rhodanese Homolog 98.7 5.9E-09 1.3E-13 78.5 2.9 65 230-324 2-66 (89)
39 TIGR02981 phageshock_pspE phag 98.7 4.7E-09 1E-13 85.8 2.3 59 236-324 16-74 (101)
40 PRK11493 sseA 3-mercaptopyruva 98.7 1.8E-08 3.9E-13 94.7 5.8 45 223-267 5-59 (281)
41 PRK10287 thiosulfate:cyanide s 98.7 6.2E-09 1.3E-13 85.8 1.7 60 235-324 17-76 (104)
42 PRK11784 tRNA 2-selenouridine 98.7 2.2E-08 4.8E-13 98.1 4.8 40 226-266 4-43 (345)
43 TIGR03167 tRNA_sel_U_synt tRNA 98.6 3.5E-08 7.7E-13 95.5 3.4 29 238-266 2-30 (311)
44 PLN02723 3-mercaptopyruvate su 98.6 5.9E-08 1.3E-12 93.4 4.6 77 223-322 190-283 (320)
45 cd01446 DSP_MapKP N-terminal r 98.5 3.7E-07 8E-12 76.0 6.3 41 225-265 2-44 (132)
46 PRK05597 molybdopterin biosynt 98.4 1.8E-07 4E-12 91.5 3.1 70 223-324 261-330 (355)
47 PRK11493 sseA 3-mercaptopyruva 98.4 4.1E-07 8.8E-12 85.5 4.7 75 225-322 155-245 (281)
48 cd01445 TST_Repeats Thiosulfat 98.3 7.3E-07 1.6E-11 76.3 5.1 42 225-266 1-66 (138)
49 PRK09629 bifunctional thiosulf 98.3 8.1E-07 1.8E-11 93.0 6.1 43 223-265 9-51 (610)
50 cd01535 4RHOD_Repeat_4 Member 98.3 3.1E-07 6.7E-12 79.3 2.0 62 230-323 2-64 (145)
51 PRK09629 bifunctional thiosulf 98.3 8.2E-07 1.8E-11 92.9 5.2 78 223-323 147-238 (610)
52 PLN02723 3-mercaptopyruvate su 98.3 1.2E-06 2.5E-11 84.5 5.8 47 222-268 21-76 (320)
53 COG2897 SseA Rhodanese-related 98.2 1.8E-06 4E-11 83.1 6.6 78 222-322 155-248 (285)
54 PRK01269 tRNA s(4)U8 sulfurtra 98.2 7.3E-07 1.6E-11 90.5 2.5 56 237-324 406-465 (482)
55 KOG3772 M-phase inducer phosph 98.0 4.4E-06 9.5E-11 81.9 4.2 62 207-268 140-207 (325)
56 KOG2017 Molybdopterin synthase 97.4 0.00011 2.4E-09 73.3 3.7 76 223-324 317-393 (427)
57 PF00708 Acylphosphatase: Acyl 96.1 0.028 6E-07 44.8 7.1 52 110-161 18-70 (91)
58 TIGR01244 conserved hypothetic 95.8 0.013 2.7E-07 50.1 4.3 31 221-251 11-41 (135)
59 PRK14420 acylphosphatase; Prov 95.7 0.036 7.7E-07 44.7 6.5 53 110-162 16-69 (91)
60 PRK14429 acylphosphatase; Prov 95.6 0.041 8.9E-07 44.4 6.4 53 110-162 16-69 (90)
61 PRK14447 acylphosphatase; Prov 95.6 0.038 8.3E-07 45.1 6.2 53 110-162 18-72 (95)
62 PRK14448 acylphosphatase; Prov 95.6 0.055 1.2E-06 43.8 7.0 53 110-162 16-69 (90)
63 PRK14435 acylphosphatase; Prov 95.2 0.077 1.7E-06 43.0 6.9 53 110-162 16-69 (90)
64 PRK14430 acylphosphatase; Prov 95.2 0.059 1.3E-06 43.9 6.3 53 110-162 18-71 (92)
65 PRK14449 acylphosphatase; Prov 95.2 0.074 1.6E-06 42.9 6.7 53 110-162 17-70 (90)
66 PRK14426 acylphosphatase; Prov 95.2 0.079 1.7E-06 43.0 6.8 53 110-162 18-72 (92)
67 PRK14422 acylphosphatase; Prov 95.1 0.07 1.5E-06 43.5 6.4 53 110-162 20-73 (93)
68 PRK14450 acylphosphatase; Prov 95.1 0.083 1.8E-06 42.7 6.6 53 110-162 16-70 (91)
69 PRK14433 acylphosphatase; Prov 95.0 0.082 1.8E-06 42.6 6.4 53 110-162 15-68 (87)
70 PRK14445 acylphosphatase; Prov 95.0 0.078 1.7E-06 42.9 6.3 53 110-162 18-71 (91)
71 PRK14440 acylphosphatase; Prov 95.0 0.086 1.9E-06 42.7 6.5 53 110-162 17-70 (90)
72 PRK14427 acylphosphatase; Prov 94.9 0.11 2.3E-06 42.5 6.9 52 110-161 20-72 (94)
73 PRK14436 acylphosphatase; Prov 94.9 0.093 2E-06 42.6 6.4 53 110-162 18-71 (91)
74 PRK14451 acylphosphatase; Prov 94.8 0.095 2.1E-06 42.4 6.4 53 110-162 17-70 (89)
75 PRK14438 acylphosphatase; Prov 94.6 0.14 3E-06 41.5 6.7 53 110-162 17-70 (91)
76 PRK14425 acylphosphatase; Prov 94.6 0.14 3E-06 41.8 6.8 53 110-162 20-73 (94)
77 PRK14432 acylphosphatase; Prov 94.6 0.12 2.6E-06 42.2 6.3 53 110-162 16-70 (93)
78 PRK14421 acylphosphatase; Prov 94.6 0.13 2.9E-06 42.6 6.7 53 110-162 18-71 (99)
79 PRK14423 acylphosphatase; Prov 94.5 0.13 2.7E-06 41.8 6.3 53 110-162 19-72 (92)
80 PRK14424 acylphosphatase; Prov 94.5 0.15 3.2E-06 41.9 6.7 53 110-162 21-74 (94)
81 COG2897 SseA Rhodanese-related 94.4 0.067 1.5E-06 52.0 5.4 50 222-271 10-66 (285)
82 PRK14428 acylphosphatase; Prov 94.4 0.14 3E-06 42.4 6.4 53 110-162 22-75 (97)
83 PF04273 DUF442: Putative phos 94.3 0.027 5.8E-07 47.3 2.1 76 222-322 12-100 (110)
84 PRK14444 acylphosphatase; Prov 94.3 0.16 3.4E-06 41.4 6.4 53 110-162 18-71 (92)
85 COG1254 AcyP Acylphosphatases 94.0 0.21 4.6E-06 41.1 6.6 53 110-162 18-71 (92)
86 PRK14452 acylphosphatase; Prov 93.9 0.22 4.9E-06 41.9 6.9 54 109-162 33-87 (107)
87 PRK14437 acylphosphatase; Prov 93.9 0.19 4.1E-06 42.4 6.4 54 109-162 36-90 (109)
88 PRK14446 acylphosphatase; Prov 93.8 0.13 2.8E-06 41.7 5.1 52 111-162 17-69 (88)
89 PRK14442 acylphosphatase; Prov 93.6 0.25 5.4E-06 40.1 6.4 53 110-162 18-71 (91)
90 PRK14431 acylphosphatase; Prov 93.2 0.28 6E-06 39.8 6.1 53 110-162 16-69 (89)
91 PRK14441 acylphosphatase; Prov 93.1 0.31 6.6E-06 39.7 6.2 53 110-162 19-72 (93)
92 PRK14434 acylphosphatase; Prov 92.8 0.29 6.3E-06 39.9 5.7 53 110-162 16-72 (92)
93 KOG3360 Acylphosphatase [Energ 92.6 0.34 7.4E-06 40.6 5.9 47 109-155 21-68 (98)
94 PRK14443 acylphosphatase; Prov 90.1 1 2.2E-05 37.1 6.2 53 110-162 18-72 (93)
95 PRK14439 acylphosphatase; Prov 89.5 1.1 2.4E-05 40.7 6.5 51 110-160 89-141 (163)
96 COG5105 MIH1 Mitotic inducer, 87.7 0.28 6E-06 49.3 1.6 46 219-264 238-289 (427)
97 cd00127 DSPc Dual specificity 87.4 0.31 6.8E-06 39.9 1.5 27 224-250 14-40 (139)
98 KOG1529 Mercaptopyruvate sulfu 86.9 0.43 9.3E-06 46.7 2.4 34 235-268 169-213 (286)
99 PLN02727 NAD kinase 85.3 0.98 2.1E-05 50.5 4.3 164 103-322 174-355 (986)
100 smart00195 DSPc Dual specifici 81.7 0.7 1.5E-05 38.3 1.1 16 307-322 77-93 (138)
101 COG3453 Uncharacterized protei 81.0 1.4 3.1E-05 38.6 2.8 29 221-249 12-40 (130)
102 PF06544 DUF1115: Protein of u 68.5 27 0.00059 29.6 7.4 54 98-153 2-56 (128)
103 COG2603 Predicted ATPase [Gene 66.9 4.1 8.8E-05 40.6 2.3 37 228-265 6-42 (334)
104 PF13117 Cag12: Cag pathogenic 63.8 47 0.001 28.5 7.9 98 10-130 2-111 (113)
105 PRK00142 putative rhodanese-re 57.3 1.2 2.6E-05 43.6 -3.2 49 227-276 18-66 (314)
106 PRK15375 pathogenicity island 55.1 15 0.00034 38.9 4.3 42 123-164 15-56 (535)
107 PRK12361 hypothetical protein; 51.8 13 0.00029 38.5 3.2 29 221-249 104-132 (547)
108 PRK12865 YciI-like protein; Re 50.6 36 0.00077 27.5 4.9 52 109-160 18-76 (97)
109 COG2453 CDC14 Predicted protei 48.2 11 0.00023 33.7 1.6 13 307-319 104-116 (180)
110 TIGR03167 tRNA_sel_U_synt tRNA 46.4 39 0.00085 33.2 5.3 45 223-267 136-183 (311)
111 PRK07688 thiamine/molybdopteri 45.7 19 0.00041 35.6 3.1 35 222-257 276-316 (339)
112 PRK12866 YciI-like protein; Re 45.0 42 0.00091 27.5 4.5 64 97-160 4-73 (97)
113 PRK12863 YciI-like protein; Re 44.8 53 0.0012 26.2 5.0 51 108-160 17-75 (94)
114 PF04940 BLUF: Sensors of blue 42.8 92 0.002 25.2 6.1 57 108-164 16-75 (93)
115 PRK12864 YciI-like protein; Re 38.8 79 0.0017 25.3 5.1 52 109-160 19-73 (89)
116 KOG1093 Predicted protein kina 35.9 11 0.00025 40.6 -0.2 39 223-264 622-660 (725)
117 PTZ00242 protein tyrosine phos 35.7 53 0.0012 29.1 4.0 13 307-319 97-109 (166)
118 COG0068 HypF Hydrogenase matur 31.6 60 0.0013 36.0 4.3 53 110-162 13-66 (750)
119 PF00782 DSPc: Dual specificit 30.0 35 0.00075 27.8 1.8 13 307-319 72-84 (133)
120 smart00012 PTPc_DSPc Protein t 26.6 49 0.0011 25.0 2.0 15 308-322 39-54 (105)
121 smart00404 PTPc_motif Protein 26.6 49 0.0011 25.0 2.0 15 308-322 39-54 (105)
122 PRK11370 YciI-like protein; Re 26.3 1.4E+02 0.0029 24.2 4.6 52 109-160 18-82 (99)
123 COG3309 VapD Uncharacterized v 26.1 55 0.0012 27.5 2.3 33 113-146 26-61 (96)
124 KOG1717 Dual specificity phosp 25.7 36 0.00078 33.9 1.3 38 222-263 3-40 (343)
125 PF13350 Y_phosphatase3: Tyros 24.0 62 0.0013 28.0 2.4 31 223-253 28-58 (164)
126 PF03795 YCII: YCII-related do 23.7 32 0.00069 26.7 0.5 67 94-160 3-82 (95)
127 KOG2283 Clathrin coat dissocia 23.6 76 0.0016 32.9 3.3 55 203-260 18-76 (434)
128 KOG3152 TBP-binding protein, a 23.5 60 0.0013 31.9 2.4 39 93-135 73-111 (278)
129 KOG2719 Metalloprotease [Gener 23.1 82 0.0018 32.9 3.3 44 98-142 207-256 (428)
130 PF14528 LAGLIDADG_3: LAGLIDAD 22.7 2.8E+02 0.006 20.7 5.5 44 108-153 30-76 (77)
131 PF14257 DUF4349: Domain of un 22.2 6.1E+02 0.013 23.7 8.8 60 96-157 49-118 (262)
132 cd04870 ACT_PSP_1 CT domains f 22.0 1.2E+02 0.0025 22.9 3.3 22 107-128 52-73 (75)
133 COG2350 Uncharacterized protei 21.4 1E+02 0.0022 25.5 3.0 39 93-131 2-40 (92)
134 PTZ00393 protein tyrosine phos 21.4 57 0.0012 31.5 1.8 12 308-319 170-181 (241)
No 1
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=100.00 E-value=8.4e-66 Score=488.85 Aligned_cols=187 Identities=51% Similarity=0.940 Sum_probs=176.8
Q ss_pred CCCeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCcccccCCCC
Q 036180 91 SSSLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQIESPVS 170 (325)
Q Consensus 91 ~~~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~~~sp~s 170 (325)
.++|.|++||+|++|+||+++|++|+++|+++||+||||||.|||||||||+.+++++|++||+++|+|++|++|++..
T Consensus 2 ~~~~~vla~Y~f~~i~dp~~~~~~l~~~~~~~~vkGrillA~EGINgtvsG~~e~~~~~~~~l~a~~~f~~l~~K~s~~- 80 (308)
T COG1054 2 SEPYTVLAYYKFVPIEDPEALRDPLLALCKALGVKGRILLAHEGINGTVSGSAEAIEAYMAWLRADPGFADLRFKISEA- 80 (308)
T ss_pred CcceEEEEEEEEEecCCHHHHHHHHHHHHHHcCceeEEEEccCCcceeEecCHHHHHHHHHHHHhCcccccceeeeccc-
Confidence 3679999999999999999999999999999999999999999999999999999999999999999999999987632
Q ss_pred chhhhhhcCCCCCCCCcCCCCCCCCCcceEEeecccccccCCCC-CCccccCCCcCCHHHHHHhhCCCCcEEEecCChhh
Q 036180 171 PEEEAIHHGHTSNSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPT-VAPIERVGKYVKPREWNALISDPDTVVIDVRNDYE 249 (325)
Q Consensus 171 ~~e~~i~~g~s~~sp~~a~~~~pF~f~kLrVKlKkEIVtlGl~~-~dp~~~~gk~lsP~e~~~li~~~d~vVIDVRN~yE 249 (325)
+..||. +|+||+|||||+||+++ ++|.+.+|+||+|+||+++|+|+|+||||+||+||
T Consensus 81 -------------------~~~pF~--r~kVk~kkEIV~lg~~ddv~p~~~vG~yl~p~~wn~~l~D~~~vviDtRN~YE 139 (308)
T COG1054 81 -------------------DEKPFW--RLKVKLKKEIVALGVEDDVDPLENVGTYLSPKDWNELLSDPDVVVIDTRNDYE 139 (308)
T ss_pred -------------------cCCCcc--eEEEeehhhheecCCCCCcCccccccCccCHHHHHHHhcCCCeEEEEcCccee
Confidence 346886 99999999999999998 99999999999999999999999999999999999
Q ss_pred hhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEcCCCcccccCC
Q 036180 250 TRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKAS 325 (325)
Q Consensus 250 ~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEKAS 325 (325)
|+||||+||++|++++|||||.|++++.+.+ ++|+|+|||||||||||||
T Consensus 140 ~~iG~F~gAv~p~~~tFrefP~~v~~~~~~~--------------------------~~KkVvmyCTGGIRCEKas 189 (308)
T COG1054 140 VAIGHFEGAVEPDIETFREFPAWVEENLDLL--------------------------KDKKVVMYCTGGIRCEKAS 189 (308)
T ss_pred EeeeeecCccCCChhhhhhhHHHHHHHHHhc--------------------------cCCcEEEEcCCceeehhhH
Confidence 9999999999999999999999999877653 5679999999999999997
No 2
>PRK01415 hypothetical protein; Validated
Probab=100.00 E-value=9e-57 Score=419.12 Aligned_cols=186 Identities=37% Similarity=0.669 Sum_probs=172.4
Q ss_pred CCeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCcccccCCCCc
Q 036180 92 SSLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQIESPVSP 171 (325)
Q Consensus 92 ~~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~~~sp~s~ 171 (325)
++|.|++||+|++|+||++++++|+++|+.++|+||||||+|||||||||+.+++++|++||+++++|+++++|.+..
T Consensus 3 ~~~~v~~fY~f~~i~~~~~~~~~l~~~~~~~~~~G~i~la~EGIN~tisg~~~~~~~~~~~l~~~~~~~~~~~k~s~~-- 80 (247)
T PRK01415 3 EKIAILSAYSFVNIEEPANLIPKLLLIGKRKYVRGTILLANEGFNGSFSGSYENVNLVLEELIKLTGPKDVNVKINYS-- 80 (247)
T ss_pred CCcEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEccCccceEeeCCHHHHHHHHHHHHhCcCCCCceeecccc--
Confidence 579999999999999999999999999999999999999999999999999999999999999999999999987642
Q ss_pred hhhhhhcCCCCCCCCcCCCCCCCCCcceEEeecccccccCCCCCCccccCCCcCCHHHHHHhhCCCCcEEEecCChhhhh
Q 036180 172 EEEAIHHGHTSNSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVAPIERVGKYVKPREWNALISDPDTVVIDVRNDYETR 251 (325)
Q Consensus 172 ~e~~i~~g~s~~sp~~a~~~~pF~f~kLrVKlKkEIVtlGl~~~dp~~~~gk~lsP~e~~~li~~~d~vVIDVRN~yE~~ 251 (325)
+.+||. +|+||+|+|||+||+++++|...+|++|+|++|+++|++++++||||||+|||+
T Consensus 81 ------------------~~~~F~--~l~vr~k~eiV~~g~~~~~~~~~~g~~i~p~e~~~ll~~~~~vvIDVRn~~E~~ 140 (247)
T PRK01415 81 ------------------DVHPFQ--KLKVRLKKEIVAMNVDDLNVDLFKGEYIEPKDWDEFITKQDVIVIDTRNDYEVE 140 (247)
T ss_pred ------------------cCCCCC--ccEEEeeceEEecCCCCCCccccCccccCHHHHHHHHhCCCcEEEECCCHHHHh
Confidence 246875 999999999999999999998889999999999999999999999999999999
Q ss_pred hcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEcCCCcccccCC
Q 036180 252 IGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKAS 325 (325)
Q Consensus 252 iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEKAS 325 (325)
+|||+||+++|++.|+++|.|++...+. .++++|+||||||+||++|+
T Consensus 141 ~Ghi~gAinip~~~f~e~~~~~~~~~~~--------------------------~k~k~Iv~yCtgGiRs~kAa 188 (247)
T PRK01415 141 VGTFKSAINPNTKTFKQFPAWVQQNQEL--------------------------LKGKKIAMVCTGGIRCEKST 188 (247)
T ss_pred cCCcCCCCCCChHHHhhhHHHHhhhhhh--------------------------cCCCeEEEECCCChHHHHHH
Confidence 9999999999999999999999643221 26789999999999999985
No 3
>PRK05320 rhodanese superfamily protein; Provisional
Probab=100.00 E-value=2.1e-50 Score=376.69 Aligned_cols=185 Identities=36% Similarity=0.623 Sum_probs=168.5
Q ss_pred CeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCcccccCCCCch
Q 036180 93 SLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQIESPVSPE 172 (325)
Q Consensus 93 ~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~~~sp~s~~ 172 (325)
.|.|++||||++|+||+++|++|+++|++++|+||||||+|||||||||+.+.|+.|+.+|+++++|.+|.+|.+..
T Consensus 2 ~~~~~~~Y~f~~i~~~~~~~~~~~~~~~~~~~~G~i~ia~eGiN~t~~g~~~~id~~~~~l~~~~~~~dl~~k~~~~--- 78 (257)
T PRK05320 2 QIVNIAAYKFVSLDDPETLRPLVLARCEALGLKGTILLAPEGINLFLAGTREAIDAFYAWLRADARFADLQVKESLS--- 78 (257)
T ss_pred ceEEEEEEceeecCCHHHHHHHHHHHHHHCCCeEEEEEcCCCceEEEEeeHHHHHHHHHHHhhCCCccCceeecccc---
Confidence 58999999999999999999999999999999999999999999999999999999999999999999998876431
Q ss_pred hhhhhcCCCCCCCCcCCCCCCCCCcceEEeecccccccCCCCCCccccCCCcCCHHHHHHhhCC------CCcEEEecCC
Q 036180 173 EEAIHHGHTSNSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVAPIERVGKYVKPREWNALISD------PDTVVIDVRN 246 (325)
Q Consensus 173 e~~i~~g~s~~sp~~a~~~~pF~f~kLrVKlKkEIVtlGl~~~dp~~~~gk~lsP~e~~~li~~------~d~vVIDVRN 246 (325)
..+||. +|+||+|+|||++|.+.+++....+++|+|+||++++++ ++++||||||
T Consensus 79 -----------------~~~pF~--~l~vk~k~eiv~~g~~~~n~~~~~~~~is~~el~~~l~~~~~~~~~~~vlIDVR~ 139 (257)
T PRK05320 79 -----------------DSQPFR--RMLVKLKREIITMKRPAIRPELGRAPSVDAATLKRWLDQGHDDAGRPVVMLDTRN 139 (257)
T ss_pred -----------------cCCCch--hccchhhhHHhhcCCcccCcccCcCceeCHHHHHHHHhccccccCCCeEEEECCC
Confidence 346886 999999999999999999988888999999999999875 3589999999
Q ss_pred hhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEcCCCcccccCC
Q 036180 247 DYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKAS 325 (325)
Q Consensus 247 ~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEKAS 325 (325)
.|||++|||+||+++|+..|+++|.|+.+.... .++++|+|||++|+||++|+
T Consensus 140 ~~E~~~Ghi~GAiniPl~~f~~~~~~l~~~~~~--------------------------~kdk~IvvyC~~G~Rs~~Aa 192 (257)
T PRK05320 140 AFEVDVGTFDGALDYRIDKFTEFPEALAAHRAD--------------------------LAGKTVVSFCTGGIRCEKAA 192 (257)
T ss_pred HHHHccCccCCCEeCChhHhhhhHHHHHhhhhh--------------------------cCCCeEEEECCCCHHHHHHH
Confidence 999999999999999999999999998753322 15689999999999999974
No 4
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=100.00 E-value=7.3e-45 Score=347.93 Aligned_cols=185 Identities=44% Similarity=0.825 Sum_probs=168.5
Q ss_pred CeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCcccccCCCCch
Q 036180 93 SLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQIESPVSPE 172 (325)
Q Consensus 93 ~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~~~sp~s~~ 172 (325)
+|.|++||||++|+||++++++|++.|+.++++|||++|.|||||||+|+.+++.+|+.||..+++|.++.++.+..
T Consensus 3 ~~~v~~~Y~f~~i~~~~~~~~~l~~~~~~~d~rg~i~~a~egIngtis~~~~~~~~~~~~l~~~~~~~~i~l~~~~~--- 79 (314)
T PRK00142 3 PYRVLLYYKYTPIEDPEAFRDEHLALCKSLGLKGRILVAEEGINGTVSGTIEQTEAYMAWLKADPRFADIRFKISED--- 79 (314)
T ss_pred ccEEEEEEccccCCCHHHHHHHHHHHHHHcCCeeEEEEcCCCceEEEEecHHHHHHHHHHHhhCcCCCCceEEeccc---
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999886531
Q ss_pred hhhhhcCCCCCCCCcCCCCCCCCCcceEEeecccccccCCC-CCCccccCCCcCCHHHHHHhhCCCCcEEEecCChhhhh
Q 036180 173 EEAIHHGHTSNSPLAAGEDAPFRWDHVRVKLKKEIVTLGMP-TVAPIERVGKYVKPREWNALISDPDTVVIDVRNDYETR 251 (325)
Q Consensus 173 e~~i~~g~s~~sp~~a~~~~pF~f~kLrVKlKkEIVtlGl~-~~dp~~~~gk~lsP~e~~~li~~~d~vVIDVRN~yE~~ 251 (325)
...+|. +|+||+|+|||++|++ .+++....+.+|+|++|++++++++++||||||.+||+
T Consensus 80 -----------------~~~~f~--~l~~~~~~eLv~~G~d~~v~~~~~~~~~is~~el~~~l~~~~~vlIDVR~~~E~~ 140 (314)
T PRK00142 80 -----------------DGHAFP--RLSVKVRKEIVALGLDDDIDPLENVGTYLKPKEVNELLDDPDVVFIDMRNDYEYE 140 (314)
T ss_pred -----------------cCCCcc--cceeeeeeeeeecCCCCCCCccccCCcccCHHHHHHHhcCCCeEEEECCCHHHHh
Confidence 234665 9999999999999995 78888888999999999999999999999999999999
Q ss_pred hcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEcCCCcccccCC
Q 036180 252 IGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKAS 325 (325)
Q Consensus 252 iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEKAS 325 (325)
+|||+||+++++..|++++.|+++.+.. .++++|+|||+||+||++|+
T Consensus 141 ~GhI~GAi~ip~~~~~~~~~~l~~~~~~--------------------------~kdk~IvvyC~~G~Rs~~aa 188 (314)
T PRK00142 141 IGHFENAIEPDIETFREFPPWVEENLDP--------------------------LKDKKVVMYCTGGIRCEKAS 188 (314)
T ss_pred cCcCCCCEeCCHHHhhhhHHHHHHhcCC--------------------------CCcCeEEEECCCCcHHHHHH
Confidence 9999999999999999999998653332 25689999999999999874
No 5
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=99.63 E-value=3.2e-16 Score=124.40 Aligned_cols=77 Identities=58% Similarity=1.157 Sum_probs=64.4
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccC
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVG 301 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (325)
|++|+|+++.+++.++++++||||+..||..|||+||+++|+..+++++..+......
T Consensus 1 ~~~is~~~l~~~~~~~~~~iiDvR~~~e~~~ghi~gA~~ip~~~~~~~~~~~~~~~~~---------------------- 58 (101)
T cd01518 1 GTYLSPAEWNELLEDPEVVLLDVRNDYEYDIGHFKGAVNPDVDTFREFPFWLDENLDL---------------------- 58 (101)
T ss_pred CCcCCHHHHHHHHcCCCEEEEEcCChhhhhcCEeccccCCCcccHhHhHHHHHhhhhh----------------------
Confidence 6899999999999988899999999999999999999999998887665444321110
Q ss_pred CCCCCCCCeEEEEcCCCcccccC
Q 036180 302 SPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 302 ~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.||..|
T Consensus 59 ----~~~~~ivvyC~~G~rs~~a 77 (101)
T cd01518 59 ----LKGKKVLMYCTGGIRCEKA 77 (101)
T ss_pred ----cCCCEEEEECCCchhHHHH
Confidence 2568999999999999765
No 6
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=99.40 E-value=2.8e-13 Score=107.14 Aligned_cols=75 Identities=16% Similarity=0.107 Sum_probs=56.8
Q ss_pred CCHHHHHHhhCC-CCcEEEecCChhhhhhcccCCCcCCCcccccCCh-hhHHhhccccccccccccccccccccccccCC
Q 036180 225 VKPREWNALISD-PDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFP-SWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 225 lsP~e~~~li~~-~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
|+|+|+.+++++ ++++|||||+..||..||++||+++|...+.+.. ...++....+
T Consensus 1 is~~el~~~l~~~~~~~liDvR~~~e~~~ghi~ga~~ip~~~~~~~~~~~~~~~~~~~---------------------- 58 (100)
T cd01523 1 LDPEDLYARLLAGQPLFILDVRNESDYERWKIDGENNTPYFDPYFDFLEIEEDILDQL---------------------- 58 (100)
T ss_pred CCHHHHHHHHHcCCCcEEEEeCCHHHHhhcccCCCcccccccchHHHHHhhHHHHhhC----------------------
Confidence 689999999977 4689999999999999999999999987764321 0011111111
Q ss_pred CCCCCCCeEEEEcCCCcccccC
Q 036180 303 PEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..|
T Consensus 59 ---~~~~~ivv~C~~G~rs~~a 77 (100)
T cd01523 59 ---PDDQEVTVICAKEGSSQFV 77 (100)
T ss_pred ---CCCCeEEEEcCCCCcHHHH
Confidence 2567999999999999765
No 7
>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.
Probab=99.34 E-value=6.6e-13 Score=106.94 Aligned_cols=74 Identities=22% Similarity=0.141 Sum_probs=58.6
Q ss_pred CCCcCCHHHHHHhhCCC-CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccc
Q 036180 221 VGKYVKPREWNALISDP-DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKE 299 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~~-d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
..+.++++++.++++++ +.++||||+..||..||||||+++|...|.+ ++.. +.
T Consensus 8 ~~~~i~~~~l~~~~~~~~~~~liDvR~~~e~~~ghIpgainip~~~l~~---~~~~----l~------------------ 62 (109)
T cd01533 8 HTPSVSADELAALQARGAPLVVLDGRRFDEYRKMTIPGSVSCPGAELVL---RVGE----LA------------------ 62 (109)
T ss_pred cCCcCCHHHHHHHHhcCCCcEEEeCCCHHHHhcCcCCCceeCCHHHHHH---HHHh----cC------------------
Confidence 34789999999999865 5899999999999999999999999876643 2321 10
Q ss_pred cCCCCCCCCCeEEEEcCCCcccccC
Q 036180 300 VGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 300 ~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
+.++++|++||.+|.|+..|
T Consensus 63 -----~~~~~~ivv~C~~G~rs~~a 82 (109)
T cd01533 63 -----PDPRTPIVVNCAGRTRSIIG 82 (109)
T ss_pred -----CCCCCeEEEECCCCchHHHH
Confidence 02467899999999998543
No 8
>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.
Probab=99.32 E-value=9.2e-13 Score=103.68 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=54.4
Q ss_pred CCHHHHHHhhCCC--CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCC
Q 036180 225 VKPREWNALISDP--DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 225 lsP~e~~~li~~~--d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
|+|+|+.++++++ ++++||||+..||..||+|||+++|...|.+ +... +..
T Consensus 1 is~~~l~~~~~~~~~~~~liDvR~~~e~~~ghipga~~ip~~~l~~---~~~~-~~~----------------------- 53 (95)
T cd01534 1 IGAAELARWAAEGDRTVYRFDVRTPEEYEAGHLPGFRHTPGGQLVQ---ETDH-FAP----------------------- 53 (95)
T ss_pred CCHHHHHHHHHcCCCCeEEEECCCHHHHHhCCCCCcEeCCHHHHHH---HHHH-hcc-----------------------
Confidence 6889999999765 5889999999999999999999999866543 2211 100
Q ss_pred CCCCCCCeEEEEcCCCcccccC
Q 036180 303 PEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..+
T Consensus 54 ---~~~~~iv~~c~~G~rs~~a 72 (95)
T cd01534 54 ---VRGARIVLADDDGVRADMT 72 (95)
T ss_pred ---cCCCeEEEECCCCChHHHH
Confidence 1357899999999998654
No 9
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=99.29 E-value=1.7e-12 Score=102.76 Aligned_cols=76 Identities=26% Similarity=0.437 Sum_probs=56.7
Q ss_pred CHHHHHHhhC-CCCcEEEecCChhhhhhcccCCCcCCCcccccCCh----hhHHhhcccccccccccccccccccccccc
Q 036180 226 KPREWNALIS-DPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFP----SWVEDQFQNDKTTHKESKVEITDEITDKEV 300 (325)
Q Consensus 226 sP~e~~~li~-~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
+++++.++++ +++++|||||+..||..||||||+++|...+.+.. ..+.+.+...
T Consensus 2 ~~~~~~~~l~~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~-------------------- 61 (106)
T cd01519 2 SFEEVKNLPNPHPNKVLIDVREPEELKTGKIPGAINIPLSSLPDALALSEEEFEKKYGFP-------------------- 61 (106)
T ss_pred cHHHHHHhcCCCCCEEEEECCCHHHHhcCcCCCcEEechHHhhhhhCCCHHHHHHHhccc--------------------
Confidence 6789999998 77899999999999999999999999987765321 1111111110
Q ss_pred CCCCCCCCCeEEEEcCCCcccccC
Q 036180 301 GSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 301 ~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
...++++|++||.+|+|+.++
T Consensus 62 ---~~~~~~~ivv~c~~g~~s~~~ 82 (106)
T cd01519 62 ---KPSKDKELIFYCKAGVRSKAA 82 (106)
T ss_pred ---CCCCCCeEEEECCCcHHHHHH
Confidence 112567999999999998654
No 10
>PRK00162 glpE thiosulfate sulfurtransferase; Validated
Probab=99.28 E-value=1.8e-12 Score=104.28 Aligned_cols=71 Identities=14% Similarity=0.280 Sum_probs=58.6
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccC
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVG 301 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (325)
.+.++|+|+.++++++++++||||+..||..|||+||+++|...|.+ |+.. +
T Consensus 4 ~~~is~~el~~~l~~~~~~ivDvR~~~e~~~ghi~gA~~ip~~~l~~---~~~~----~--------------------- 55 (108)
T PRK00162 4 FECINVEQAHQKLQEGGAVLVDIRDPQSFAMGHAPGAFHLTNDSLGA---FMRQ----A--------------------- 55 (108)
T ss_pred ccccCHHHHHHHHHcCCCEEEEcCCHHHHhcCCCCCCeECCHHHHHH---HHHh----c---------------------
Confidence 47899999999998878999999999999999999999999876653 3321 1
Q ss_pred CCCCCCCCeEEEEcCCCcccccC
Q 036180 302 SPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 302 ~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..+
T Consensus 56 ----~~~~~ivv~c~~g~~s~~a 74 (108)
T PRK00162 56 ----DFDTPVMVMCYHGNSSQGA 74 (108)
T ss_pred ----CCCCCEEEEeCCCCCHHHH
Confidence 1467899999999998654
No 11
>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1. This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.
Probab=99.28 E-value=2.9e-12 Score=105.57 Aligned_cols=75 Identities=25% Similarity=0.488 Sum_probs=56.8
Q ss_pred CCHHHHHHhhCC-CCcEEEecCChhhhh-hcccCCCcCCCcccccCC---hhhHHhhccccccccccccccccccccccc
Q 036180 225 VKPREWNALISD-PDTVVIDVRNDYETR-IGKFKGAVDPVTTAFREF---PSWVEDQFQNDKTTHKESKVEITDEITDKE 299 (325)
Q Consensus 225 lsP~e~~~li~~-~d~vVIDVRN~yE~~-iGhF~GAv~pp~~~FrEf---p~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
|+|+|+.+++++ ++++|||||+.+||. .||||||+++|...+.+. ..+... +...
T Consensus 1 is~~el~~~l~~~~~~~vIDvR~~~e~~~~ghIpgA~~ip~~~~~~~~~~~~~~~~-l~~~------------------- 60 (117)
T cd01522 1 LTPAEAWALLQADPQAVLVDVRTEAEWKFVGGVPDAVHVAWQVYPDMEINPNFLAE-LEEK------------------- 60 (117)
T ss_pred CCHHHHHHHHHhCCCeEEEECCCHHHHhcccCCCCceecchhhccccccCHHHHHH-HHhh-------------------
Confidence 689999999987 579999999999999 999999999998766431 011111 1000
Q ss_pred cCCCCCCCCCeEEEEcCCCcccccC
Q 036180 300 VGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 300 ~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
..++++|++||.+|+|+.++
T Consensus 61 -----~~~~~~ivv~C~~G~rs~~a 80 (117)
T cd01522 61 -----VGKDRPVLLLCRSGNRSIAA 80 (117)
T ss_pred -----CCCCCeEEEEcCCCccHHHH
Confidence 02467899999999999765
No 12
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=99.28 E-value=3.9e-12 Score=106.09 Aligned_cols=41 Identities=27% Similarity=0.267 Sum_probs=37.4
Q ss_pred CCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccc
Q 036180 225 VKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAF 266 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~F 266 (325)
|+|+|+.+++. ++.++||||+..||..||||||+|+|+..+
T Consensus 1 ~s~~el~~~l~-~~~~iiDvR~~~e~~~ghIpgAinip~~~~ 41 (128)
T cd01520 1 ITAEDLLALRK-ADGPLIDVRSPKEFFEGHLPGAINLPLLDD 41 (128)
T ss_pred CCHHHHHHHHh-cCCEEEECCCHHHhccCcCCCcEEccCCCh
Confidence 68999999998 678999999999999999999999998654
No 13
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=99.27 E-value=3.8e-12 Score=105.01 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=59.8
Q ss_pred CCcCCHHHHHHhhCC-CCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhcccccccccccccccccccccccc
Q 036180 222 GKYVKPREWNALISD-PDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEV 300 (325)
Q Consensus 222 gk~lsP~e~~~li~~-~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
...|+++|+.+++.+ ++++|||||+..||+.||||||+++|...|.+....+... ....
T Consensus 7 ~~~is~~el~~~~~~~~~~~ivDvR~~~e~~~~hIpgai~ip~~~~~~~~~~~~~~-~~~~------------------- 66 (122)
T cd01526 7 EERVSVKDYKNILQAGKKHVLLDVRPKVHFEICRLPEAINIPLSELLSKAAELKSL-QELP------------------- 66 (122)
T ss_pred ccccCHHHHHHHHhCCCCeEEEEcCCHHHhhcccCCCCeEccHHHHhhhhhhhhhh-hhcc-------------------
Confidence 468899999999987 6789999999999999999999999988775421111100 0000
Q ss_pred CCCCCCCCCeEEEEcCCCcccccC
Q 036180 301 GSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 301 ~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
....++++|++||.+|.|+.++
T Consensus 67 --~~~~~~~~ivv~C~~G~rs~~a 88 (122)
T cd01526 67 --LDNDKDSPIYVVCRRGNDSQTA 88 (122)
T ss_pred --cccCCCCcEEEECCCCCcHHHH
Confidence 0012578999999999999754
No 14
>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily. Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).
Probab=99.27 E-value=3.6e-12 Score=103.64 Aligned_cols=75 Identities=27% Similarity=0.408 Sum_probs=56.4
Q ss_pred CcCCHHHHHHhhCCC------CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhcccccccccccccccccccc
Q 036180 223 KYVKPREWNALISDP------DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEIT 296 (325)
Q Consensus 223 k~lsP~e~~~li~~~------d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~ 296 (325)
++|+|+|+.++++++ +++|||||+. ||..|||+||+++|+..|.+. +.+.+..+.
T Consensus 2 ~~is~~el~~~l~~~~~~~~~~~~iiDvR~~-ef~~ghipgAi~ip~~~~~~~---~~~~~~~~~--------------- 62 (113)
T cd01443 2 KYISPEELVALLENSDSNAGKDFVVVDLRRD-DYEGGHIKGSINLPAQSCYQT---LPQVYALFS--------------- 62 (113)
T ss_pred cccCHHHHHHHHhCCccccCCcEEEEECCch-hcCCCcccCceecchhHHHHH---HHHHHHHhh---------------
Confidence 579999999999875 6899999999 999999999999999877643 222111110
Q ss_pred ccccCCCCCCCCCeEEEEcCC-CcccccC
Q 036180 297 DKEVGSPEKRMPKRVAMYCTG-GIRCEKA 324 (325)
Q Consensus 297 ~~~~~~~~k~k~k~IvmYCTG-GIRCEKA 324 (325)
+.+.++|++||.+ |.|+..|
T Consensus 63 --------~~~~~~iv~~C~~~g~rs~~a 83 (113)
T cd01443 63 --------LAGVKLAIFYCGSSQGRGPRA 83 (113)
T ss_pred --------hcCCCEEEEECCCCCcccHHH
Confidence 0134689999986 7887543
No 15
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=99.26 E-value=3.2e-12 Score=101.46 Aligned_cols=72 Identities=22% Similarity=0.347 Sum_probs=56.7
Q ss_pred cCCHHHHHHhhCCC--CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccC
Q 036180 224 YVKPREWNALISDP--DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVG 301 (325)
Q Consensus 224 ~lsP~e~~~li~~~--d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (325)
.|+++++.+++..+ ++++||||+..||..|||+||+++|...|.+ |++. +...
T Consensus 1 ~i~~~~l~~~~~~~~~~~~iiDvR~~~e~~~~hI~ga~~ip~~~~~~---~~~~-~~~~--------------------- 55 (101)
T cd01528 1 QISVAELAEWLADEREEPVLIDVREPEELEIAFLPGFLHLPMSEIPE---RSKE-LDSD--------------------- 55 (101)
T ss_pred CCCHHHHHHHHhcCCCCCEEEECCCHHHHhcCcCCCCEecCHHHHHH---HHHH-hccc---------------------
Confidence 37899999999865 6899999999999999999999999876654 3321 1100
Q ss_pred CCCCCCCCeEEEEcCCCcccccC
Q 036180 302 SPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 302 ~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..+
T Consensus 56 ----~~~~~vv~~c~~g~rs~~~ 74 (101)
T cd01528 56 ----NPDKDIVVLCHHGGRSMQV 74 (101)
T ss_pred ----CCCCeEEEEeCCCchHHHH
Confidence 1467899999999998764
No 16
>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily. Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.
Probab=99.26 E-value=4.2e-12 Score=103.09 Aligned_cols=75 Identities=23% Similarity=0.398 Sum_probs=58.7
Q ss_pred CcCCHHHHHHhhCC--CCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhcccccccccccccccccccccccc
Q 036180 223 KYVKPREWNALISD--PDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEV 300 (325)
Q Consensus 223 k~lsP~e~~~li~~--~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
++|+++++.+++.+ +++++||||+. ||..|||+||+++|...|.....++......
T Consensus 2 ~~is~~~l~~~~~~~~~~~~iiDvR~~-e~~~~hi~gA~~ip~~~l~~~~~~~~~~~~~--------------------- 59 (113)
T cd01531 2 SYISPAQLKGWIRNGRPPFQVVDVRDE-DYAGGHIKGSWHYPSTRFKAQLNQLVQLLSG--------------------- 59 (113)
T ss_pred CcCCHHHHHHHHHcCCCCEEEEEcCCc-ccCCCcCCCCEecCHHHHhhCHHHHHHHHhc---------------------
Confidence 68999999999976 56889999999 9999999999999998876544333321110
Q ss_pred CCCCCCCCCeEEEEcC-CCcccccC
Q 036180 301 GSPEKRMPKRVAMYCT-GGIRCEKA 324 (325)
Q Consensus 301 ~~~~k~k~k~IvmYCT-GGIRCEKA 324 (325)
.++++|++||. +|.|+..|
T Consensus 60 -----~~~~~iv~yC~~~~~r~~~a 79 (113)
T cd01531 60 -----SKKDTVVFHCALSQVRGPSA 79 (113)
T ss_pred -----CCCCeEEEEeecCCcchHHH
Confidence 14678999998 88888665
No 17
>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily. Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.
Probab=99.25 E-value=3.5e-12 Score=99.03 Aligned_cols=69 Identities=19% Similarity=0.374 Sum_probs=56.5
Q ss_pred cCCHHHHHHhhCC-CCcEEEecCChhhhhh--cccCCCcCCCcccccCChhhHHhhcccccccccccccccccccccccc
Q 036180 224 YVKPREWNALISD-PDTVVIDVRNDYETRI--GKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEV 300 (325)
Q Consensus 224 ~lsP~e~~~li~~-~d~vVIDVRN~yE~~i--GhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
.++++++.+++.+ .++++||||+..||.. |||+||+++|...|.+ |+. .+
T Consensus 1 ~i~~~~~~~~~~~~~~~~ivDvR~~~e~~~~~~hi~ga~~ip~~~~~~---~~~----~~-------------------- 53 (96)
T cd01444 1 RISVDELAELLAAGEAPVLLDVRDPASYAALPDHIPGAIHLDEDSLDD---WLG----DL-------------------- 53 (96)
T ss_pred CcCHHHHHHHHhcCCCcEEEECCCHHHHhcccCCCCCCeeCCHHHHHH---HHh----hc--------------------
Confidence 4789999999987 5799999999999999 9999999999886643 222 11
Q ss_pred CCCCCCCCCeEEEEcCCCcccccC
Q 036180 301 GSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 301 ~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..+
T Consensus 54 -----~~~~~ivv~c~~g~~s~~a 72 (96)
T cd01444 54 -----DRDRPVVVYCYHGNSSAQL 72 (96)
T ss_pred -----CCCCCEEEEeCCCChHHHH
Confidence 1467999999999998654
No 18
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=99.24 E-value=5.7e-12 Score=101.76 Aligned_cols=77 Identities=25% Similarity=0.278 Sum_probs=57.5
Q ss_pred CCHHHHHHhhCCCCcEEEecCChhhhhh-----------cccCCCcCCCcccccC------ChhhHHhhccccccccccc
Q 036180 225 VKPREWNALISDPDTVVIDVRNDYETRI-----------GKFKGAVDPVTTAFRE------FPSWVEDQFQNDKTTHKES 287 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~yE~~i-----------GhF~GAv~pp~~~FrE------fp~~v~~~~~~~~~~~~~~ 287 (325)
++++++.+++++++++|||||+..||.. |||+||+++|...+.. .+.++...+....
T Consensus 1 ~s~~~l~~~l~~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~~~~~~~~~~~~~~~~~~------ 74 (118)
T cd01449 1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFKSPEELRALFAALG------ 74 (118)
T ss_pred CCHHHHHHhcCCCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCCCCcCCHHHHHHHHHHcC------
Confidence 5789999999887899999999999976 9999999999876543 1233332222110
Q ss_pred cccccccccccccCCCCCCCCCeEEEEcCCCcccccC
Q 036180 288 KVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 288 ~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
..++++|++||.+|.||..+
T Consensus 75 -----------------~~~~~~iv~yc~~g~~s~~~ 94 (118)
T cd01449 75 -----------------ITPDKPVIVYCGSGVTACVL 94 (118)
T ss_pred -----------------CCCCCCEEEECCcHHHHHHH
Confidence 12567899999999998654
No 19
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=99.21 E-value=6.7e-12 Score=97.88 Aligned_cols=67 Identities=27% Similarity=0.382 Sum_probs=54.1
Q ss_pred CCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCC
Q 036180 225 VKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPE 304 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (325)
++|+||.+++ .++.++||||+..||..||||||+++|...|.+ |+. .+
T Consensus 1 ~~~~e~~~~~-~~~~~iiD~R~~~~~~~~hipgA~~ip~~~~~~---~~~----~~------------------------ 48 (90)
T cd01524 1 VQWHELDNYR-ADGVTLIDVRTPQEFEKGHIKGAINIPLDELRD---RLN----EL------------------------ 48 (90)
T ss_pred CCHHHHHHHh-cCCCEEEECCCHHHHhcCCCCCCEeCCHHHHHH---HHH----hc------------------------
Confidence 5799999999 567899999999999999999999999876643 222 11
Q ss_pred CCCCCeEEEEcCCCcccccC
Q 036180 305 KRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 305 k~k~k~IvmYCTGGIRCEKA 324 (325)
..+++|++||..|.|+..+
T Consensus 49 -~~~~~vvl~c~~g~~a~~~ 67 (90)
T cd01524 49 -PKDKEIIVYCAVGLRGYIA 67 (90)
T ss_pred -CCCCcEEEEcCCChhHHHH
Confidence 1357899999999987654
No 20
>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain. This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.
Probab=99.20 E-value=1.6e-11 Score=96.18 Aligned_cols=76 Identities=25% Similarity=0.453 Sum_probs=54.8
Q ss_pred CCHHHHHHhhCCCCcEEEecCChhhh-hhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCC
Q 036180 225 VKPREWNALISDPDTVVIDVRNDYET-RIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSP 303 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~yE~-~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (325)
|+++|+.+++++++.+|||||++.|+ ..||||||+++|...|..+ .+.. .... . .
T Consensus 1 is~~el~~~~~~~~~~iiDvR~~~~~~~~ghIpga~~ip~~~~~~~---~~~~-~~~~----~----------------~ 56 (103)
T cd01447 1 LSPEDARALLGSPGVLLVDVRDPRELERTGMIPGAFHAPRGMLEFW---ADPD-SPYH----K----------------P 56 (103)
T ss_pred CCHHHHHHHHhCCCeEEEECCCHHHHHhcCCCCCcEEcccchhhhh---cCcc-cccc----c----------------c
Confidence 57899999998888999999999998 5699999999997665422 2110 0000 0 0
Q ss_pred CCCCCCeEEEEcCCCcccccC
Q 036180 304 EKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 304 ~k~k~k~IvmYCTGGIRCEKA 324 (325)
.-.++++|++||.+|.|+..+
T Consensus 57 ~~~~~~~ivv~c~~g~~s~~~ 77 (103)
T cd01447 57 AFAEDKPFVFYCASGWRSALA 77 (103)
T ss_pred CCCCCCeEEEEcCCCCcHHHH
Confidence 002567999999999997653
No 21
>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily. Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.
Probab=99.17 E-value=2.8e-11 Score=95.83 Aligned_cols=78 Identities=10% Similarity=0.140 Sum_probs=54.2
Q ss_pred CCHHHHHHhhCCC--CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCC
Q 036180 225 VKPREWNALISDP--DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 225 lsP~e~~~li~~~--d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
|+++++.+++.++ +++|||||+..||..|||+||+++|...+......+.. +... +.+.
T Consensus 1 is~~~l~~~l~~~~~~~~liDvR~~~e~~~ghIpgA~~ip~~~~~~~~~~~~~-~~~~------------~~~~------ 61 (105)
T cd01525 1 ISVYDVIRLLDNSPAKLAAVDIRSSPDFRRGHIEGSINIPFSSVFLKEGELEQ-LPTV------------PRLE------ 61 (105)
T ss_pred CCHHHHHHHHhCCCCCeEEEECCCHHHHhCCccCCCEeCCHHHhccccccccc-ccch------------HHHH------
Confidence 6899999999764 68999999999999999999999998655321111110 0000 0000
Q ss_pred CCCCCCCeEEEEcCCCccccc
Q 036180 303 PEKRMPKRVAMYCTGGIRCEK 323 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEK 323 (325)
+.++++|++||.+|.|+..
T Consensus 62 --~~~~~~vv~~c~~g~~s~~ 80 (105)
T cd01525 62 --NYKGKIIVIVSHSHKHAAL 80 (105)
T ss_pred --hhcCCeEEEEeCCCccHHH
Confidence 0136789999999999754
No 22
>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.
Probab=99.17 E-value=2e-11 Score=96.13 Aligned_cols=68 Identities=16% Similarity=0.214 Sum_probs=55.6
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCC
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
+.++|+|+.+++.++ .+|||||+..||..||++||+++|...|.+. ....
T Consensus 2 ~~i~~~el~~~~~~~-~~liDvR~~~e~~~~hi~ga~~ip~~~~~~~-------~~~~---------------------- 51 (99)
T cd01527 2 TTISPNDACELLAQG-AVLVDIREPDEYLRERIPGARLVPLSQLESE-------GLPL---------------------- 51 (99)
T ss_pred CccCHHHHHHHHHCC-CEEEECCCHHHHHhCcCCCCEECChhHhccc-------ccCC----------------------
Confidence 468999999998876 8999999999999999999999998776542 0011
Q ss_pred CCCCCCCeEEEEcCCCccccc
Q 036180 303 PEKRMPKRVAMYCTGGIRCEK 323 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEK 323 (325)
.++++|++||.+|.|+..
T Consensus 52 ---~~~~~iv~~c~~g~~s~~ 69 (99)
T cd01527 52 ---VGANAIIFHCRSGMRTQQ 69 (99)
T ss_pred ---CCCCcEEEEeCCCchHHH
Confidence 256799999999999754
No 23
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=99.15 E-value=3.1e-11 Score=94.99 Aligned_cols=63 Identities=21% Similarity=0.313 Sum_probs=48.1
Q ss_pred CCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEc
Q 036180 236 DPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYC 315 (325)
Q Consensus 236 ~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYC 315 (325)
++++++||||+..||..||||||+++|...|.....+++. +.. ..++++|++||
T Consensus 10 ~~~~~iiDvR~~~~~~~~hIpgA~~ip~~~~~~~~~~~~~-~~~-------------------------~~~~~~ivv~c 63 (96)
T cd01529 10 EPGTALLDVRAEDEYAAGHLPGKRSIPGAALVLRSQELQA-LEA-------------------------PGRATRYVLTC 63 (96)
T ss_pred CCCeEEEeCCCHHHHcCCCCCCcEeCCHHHhcCCHHHHHH-hhc-------------------------CCCCCCEEEEe
Confidence 5679999999999999999999999998766554444332 111 12567899999
Q ss_pred CCCcccccC
Q 036180 316 TGGIRCEKA 324 (325)
Q Consensus 316 TGGIRCEKA 324 (325)
.+|.|+..+
T Consensus 64 ~~g~~s~~~ 72 (96)
T cd01529 64 DGSLLARFA 72 (96)
T ss_pred CChHHHHHH
Confidence 999998653
No 24
>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily. They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).
Probab=99.11 E-value=4.9e-11 Score=99.45 Aligned_cols=76 Identities=25% Similarity=0.384 Sum_probs=56.4
Q ss_pred CcCCHHHHHHhhCC------CCcEEEecCChhhhhhcccCCCcCCCcc-cccCChhhHHhhccccccccccccccccccc
Q 036180 223 KYVKPREWNALISD------PDTVVIDVRNDYETRIGKFKGAVDPVTT-AFREFPSWVEDQFQNDKTTHKESKVEITDEI 295 (325)
Q Consensus 223 k~lsP~e~~~li~~------~d~vVIDVRN~yE~~iGhF~GAv~pp~~-~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~ 295 (325)
++|+|+|+.+++.+ +++++||||...||..|||+||+++|.. .+.+ ++.......
T Consensus 2 ~~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghI~gA~~ip~~~~l~~---~~~~~~~~~--------------- 63 (121)
T cd01530 2 KRISPETLARLLQGKYDNFFDKYIIIDCRFPYEYNGGHIKGAVNLSTKDELEE---FFLDKPGVA--------------- 63 (121)
T ss_pred CccCHHHHHHHHhcccccCCCCEEEEECCCHHHHhCCcCCCCEeCCcHHHHHH---HHHHhhccc---------------
Confidence 47899999999975 3789999999999999999999999985 3432 111100000
Q ss_pred cccccCCCCCCCCCeEEEEcC-CCcccccC
Q 036180 296 TDKEVGSPEKRMPKRVAMYCT-GGIRCEKA 324 (325)
Q Consensus 296 ~~~~~~~~~k~k~k~IvmYCT-GGIRCEKA 324 (325)
..+++++|++||. +|.|+..|
T Consensus 64 --------~~~~~~~vv~yC~~sg~rs~~a 85 (121)
T cd01530 64 --------SKKKRRVLIFHCEFSSKRGPRM 85 (121)
T ss_pred --------ccCCCCEEEEECCCccccHHHH
Confidence 0135789999997 99998654
No 25
>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family.; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....
Probab=99.09 E-value=4.5e-11 Score=93.74 Aligned_cols=41 Identities=27% Similarity=0.458 Sum_probs=37.4
Q ss_pred CHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccc
Q 036180 226 KPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAF 266 (325)
Q Consensus 226 sP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~F 266 (325)
||+|+.+++.+++++|||||+..||..|||+||++++...+
T Consensus 1 s~~el~~~l~~~~~~liD~R~~~~~~~~hI~ga~~i~~~~~ 41 (113)
T PF00581_consen 1 SPEELKEMLENESVLLIDVRSPEEYERGHIPGAVNIPFPSL 41 (113)
T ss_dssp -HHHHHHHHTTTTEEEEEESSHHHHHHSBETTEEEEEGGGG
T ss_pred CHHHHHhhhhCCCeEEEEeCCHHHHHcCCCCCCcccccccc
Confidence 68999999988899999999999999999999999999654
No 26
>PLN02160 thiosulfate sulfurtransferase
Probab=99.08 E-value=1.3e-10 Score=99.04 Aligned_cols=77 Identities=21% Similarity=0.182 Sum_probs=55.0
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCC--cCCCcccccC---C--hhhHHhhcccccccccccccccccc
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGA--VDPVTTAFRE---F--PSWVEDQFQNDKTTHKESKVEITDE 294 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GA--v~pp~~~FrE---f--p~~v~~~~~~~~~~~~~~~~~~~~~ 294 (325)
.+.++++|+.++++++ .+|||||+..||..|||+|| +++|...+.. + +..+.+....+
T Consensus 14 ~~~i~~~e~~~~~~~~-~~lIDVR~~~E~~~ghIpgA~~iniP~~~~~~~~~l~~~~~~~~~~~~~-------------- 78 (136)
T PLN02160 14 VVSVDVSQAKTLLQSG-HQYLDVRTQDEFRRGHCEAAKIVNIPYMLNTPQGRVKNQEFLEQVSSLL-------------- 78 (136)
T ss_pred eeEeCHHHHHHHHhCC-CEEEECCCHHHHhcCCCCCcceecccchhcCcccccCCHHHHHHHHhcc--------------
Confidence 3678999999998764 68999999999999999999 8888643311 0 11111110000
Q ss_pred ccccccCCCCCCCCCeEEEEcCCCcccccC
Q 036180 295 ITDKEVGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 295 ~~~~~~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..|
T Consensus 79 -----------~~~~~IivyC~sG~RS~~A 97 (136)
T PLN02160 79 -----------NPADDILVGCQSGARSLKA 97 (136)
T ss_pred -----------CCCCcEEEECCCcHHHHHH
Confidence 2467899999999998765
No 27
>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily. This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.
Probab=99.04 E-value=1.6e-10 Score=93.53 Aligned_cols=47 Identities=19% Similarity=0.246 Sum_probs=41.1
Q ss_pred CCCcCCHHHHHHhhCC--CCcEEEecCChhhhhhcccCCCcCCCccccc
Q 036180 221 VGKYVKPREWNALISD--PDTVVIDVRNDYETRIGKFKGAVDPVTTAFR 267 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~--~d~vVIDVRN~yE~~iGhF~GAv~pp~~~Fr 267 (325)
...+++++|+.+++.+ ++.+|||||+..||..||||||+++|...|.
T Consensus 6 ~~~~~s~~el~~~l~~~~~~~~iiDvR~~~e~~~ghIpgA~~ip~~~l~ 54 (110)
T cd01521 6 LAFETDCWDVAIALKNGKPDFVLVDVRSAEAYARGHVPGAINLPHREIC 54 (110)
T ss_pred eeeecCHHHHHHHHHcCCCCEEEEECCCHHHHhcCCCCCCEeCCHHHhh
Confidence 3468999999999976 4689999999999999999999999986654
No 28
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=98.98 E-value=6e-10 Score=90.84 Aligned_cols=44 Identities=27% Similarity=0.222 Sum_probs=39.8
Q ss_pred CCHHHHHHhhCCCCcEEEecCCh-------hhhhhcccCCCcCCCcccccC
Q 036180 225 VKPREWNALISDPDTVVIDVRND-------YETRIGKFKGAVDPVTTAFRE 268 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~-------yE~~iGhF~GAv~pp~~~FrE 268 (325)
++++++.+++.+++.+|||||+. .||..|||+||+++|...+.+
T Consensus 2 i~~~~l~~~l~~~~~~ivDvR~~~~~~~~~~~~~~ghI~ga~~i~~~~~~~ 52 (122)
T cd01448 2 VSPDWLAEHLDDPDVRILDARWYLPDRDGRKEYLEGHIPGAVFFDLDEDLD 52 (122)
T ss_pred cCHHHHHHHhCCCCeEEEEeecCCCCCchhhHHhhCCCCCCEEcChhhccc
Confidence 68999999999888999999999 999999999999999876643
No 29
>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.95 E-value=7.3e-10 Score=87.38 Aligned_cols=68 Identities=24% Similarity=0.375 Sum_probs=52.9
Q ss_pred HHHHHHhhCCCCcEEEecCChhhhhhcccCC-CcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCC
Q 036180 227 PREWNALISDPDTVVIDVRNDYETRIGKFKG-AVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEK 305 (325)
Q Consensus 227 P~e~~~li~~~d~vVIDVRN~yE~~iGhF~G-Av~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 305 (325)
......+...++.++||||+..||..||++| ++++|+..+++.. ... . .
T Consensus 9 ~~~~~~~~~~~~~~liDvR~~~e~~~~~i~~~~~~ip~~~~~~~~-------~~~-----------~------------~ 58 (110)
T COG0607 9 EDEAALLLAGEDAVLLDVREPEEYERGHIPGAAINIPLSELKAAE-------NLL-----------E------------L 58 (110)
T ss_pred HHHHHHhhccCCCEEEeccChhHhhhcCCCcceeeeecccchhhh-------ccc-----------c------------c
Confidence 3444455566789999999999999999999 9999999887641 110 0 1
Q ss_pred CCCCeEEEEcCCCcccccC
Q 036180 306 RMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 306 ~k~k~IvmYCTGGIRCEKA 324 (325)
+++++|++||.+|.|+..|
T Consensus 59 ~~~~~ivv~C~~G~rS~~a 77 (110)
T COG0607 59 PDDDPIVVYCASGVRSAAA 77 (110)
T ss_pred CCCCeEEEEeCCCCChHHH
Confidence 2678999999999999765
No 30
>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.93 E-value=5.8e-10 Score=96.69 Aligned_cols=85 Identities=20% Similarity=0.300 Sum_probs=61.6
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccC
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVG 301 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (325)
...++-++.+.|+..++.++||||.+.|+..||++.++|+|...-......-+..|. +.+|..
T Consensus 22 ~~sv~~~qvk~L~~~~~~~llDVRepeEfk~gh~~~siNiPy~~~~~~~~l~~~eF~-----------kqvg~~------ 84 (136)
T KOG1530|consen 22 PQSVSVEQVKNLLQHPDVVLLDVREPEEFKQGHIPASINIPYMSRPGAGALKNPEFL-----------KQVGSS------ 84 (136)
T ss_pred cEEEEHHHHHHHhcCCCEEEEeecCHHHhhccCCcceEeccccccccccccCCHHHH-----------HHhccc------
Confidence 356778999999999999999999999999999999999999543322111111111 122322
Q ss_pred CCCCCCCCeEEEEcCCCcccccCC
Q 036180 302 SPEKRMPKRVAMYCTGGIRCEKAS 325 (325)
Q Consensus 302 ~~~k~k~k~IvmYCTGGIRCEKAS 325 (325)
....++.|++||..|.|+-+|+
T Consensus 85 --kp~~d~eiIf~C~SG~Rs~~A~ 106 (136)
T KOG1530|consen 85 --KPPHDKEIIFGCASGVRSLKAT 106 (136)
T ss_pred --CCCCCCcEEEEeccCcchhHHH
Confidence 1234678999999999998874
No 31
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=98.89 E-value=1e-09 Score=83.15 Aligned_cols=66 Identities=27% Similarity=0.352 Sum_probs=47.1
Q ss_pred CCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHh-----hccccccccccccccccccccccccCCCCCCCCCe
Q 036180 236 DPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVED-----QFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKR 310 (325)
Q Consensus 236 ~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~ 310 (325)
+++++|||||...||..|||+||+++|...+.+....... .... ....++++
T Consensus 2 ~~~~~ivDvR~~~e~~~~hi~ga~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~ 58 (100)
T smart00450 2 DEKVVLLDVRSPEEYEGGHIPGAVNIPLSELLDRRGELDILEFEELLKR-----------------------LGLDKDKP 58 (100)
T ss_pred CCCEEEEECCCHHHhccCCCCCceeCCHHHhccCCCCcCHHHHHHHHHH-----------------------cCCCCCCe
Confidence 4679999999999999999999999999876653221110 0000 01135689
Q ss_pred EEEEcCCCcccccC
Q 036180 311 VAMYCTGGIRCEKA 324 (325)
Q Consensus 311 IvmYCTGGIRCEKA 324 (325)
|++||.+|.|+..+
T Consensus 59 iv~~c~~g~~a~~~ 72 (100)
T smart00450 59 VVVYCRSGNRSAKA 72 (100)
T ss_pred EEEEeCCCcHHHHH
Confidence 99999999998543
No 32
>PRK07411 hypothetical protein; Validated
Probab=98.89 E-value=1e-09 Score=108.40 Aligned_cols=76 Identities=30% Similarity=0.318 Sum_probs=58.9
Q ss_pred CCcCCHHHHHHhhCCC--CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccc
Q 036180 222 GKYVKPREWNALISDP--DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKE 299 (325)
Q Consensus 222 gk~lsP~e~~~li~~~--d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
.+.++++|+.++++++ +.++||||+..||+.|||+||+++|...+.+... ++ .+...
T Consensus 281 ~~~Is~~el~~~l~~~~~~~vlIDVR~~~E~~~ghIpGAiniP~~~l~~~~~-~~-~l~~l------------------- 339 (390)
T PRK07411 281 IPEMTVTELKALLDSGADDFVLIDVRNPNEYEIARIPGSVLVPLPDIENGPG-VE-KVKEL------------------- 339 (390)
T ss_pred cCccCHHHHHHHHhCCCCCeEEEECCCHHHhccCcCCCCEEccHHHhhcccc-hH-HHhhc-------------------
Confidence 4689999999998754 5899999999999999999999999877654210 11 11111
Q ss_pred cCCCCCCCCCeEEEEcCCCcccccC
Q 036180 300 VGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 300 ~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+..|
T Consensus 340 ------~~d~~IVvyC~~G~RS~~a 358 (390)
T PRK07411 340 ------LNGHRLIAHCKMGGRSAKA 358 (390)
T ss_pred ------CCCCeEEEECCCCHHHHHH
Confidence 2467899999999999765
No 33
>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.
Probab=98.85 E-value=2.4e-09 Score=84.27 Aligned_cols=60 Identities=18% Similarity=0.139 Sum_probs=45.6
Q ss_pred HhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeE
Q 036180 232 ALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRV 311 (325)
Q Consensus 232 ~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~I 311 (325)
+++++++++|||||+..||..||++||+++|...|... . ....+ .++++|
T Consensus 4 ~~~~~~~~~liDvR~~~e~~~~hi~ga~~ip~~~~~~~--~----~~~~~------------------------~~~~~i 53 (92)
T cd01532 4 ALLAREEIALIDVREEDPFAQSHPLWAANLPLSRLELD--A----WVRIP------------------------RRDTPI 53 (92)
T ss_pred HhhcCCCeEEEECCCHHHHhhCCcccCeeCCHHHHHhh--h----HhhCC------------------------CCCCeE
Confidence 45677889999999999999999999999998765321 0 01110 146789
Q ss_pred EEEcCCCccc
Q 036180 312 AMYCTGGIRC 321 (325)
Q Consensus 312 vmYCTGGIRC 321 (325)
++||.+|.|.
T Consensus 54 vl~c~~G~~~ 63 (92)
T cd01532 54 VVYGEGGGED 63 (92)
T ss_pred EEEeCCCCch
Confidence 9999999883
No 34
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=98.83 E-value=2.2e-09 Score=105.74 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=58.3
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccC---CCcCCCcccccCChhhHHhhccccccccccccccccccccccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFK---GAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKE 299 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~---GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
..++++|+.+++++++.++||||++.||+.||++ ||+|+|+..+++...... .+...
T Consensus 271 ~~~~~~el~~~l~~~~~~lIDVR~~~E~~~ghI~~~~gAinIPl~~l~~~~~~~~-~l~~~------------------- 330 (370)
T PRK05600 271 ARTDTTSLIDATLNGSATLLDVREPHEVLLKDLPEGGASLKLPLSAITDDADILH-ALSPI------------------- 330 (370)
T ss_pred cccCHHHHHHHHhcCCeEEEECCCHHHhhhccCCCCCccEeCcHHHhhcchhhhh-hcccc-------------------
Confidence 4689999999998888899999999999999998 699999988865311111 11111
Q ss_pred cCCCCCCCCCeEEEEcCCCcccccC
Q 036180 300 VGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 300 ~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
++++|++||..|.|+.+|
T Consensus 331 -------~~~~Ivv~C~sG~RS~~A 348 (370)
T PRK05600 331 -------DGDNVVVYCASGIRSADF 348 (370)
T ss_pred -------CCCcEEEECCCChhHHHH
Confidence 223899999999999876
No 35
>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein. Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.
Probab=98.81 E-value=6.3e-09 Score=91.43 Aligned_cols=86 Identities=14% Similarity=0.180 Sum_probs=56.7
Q ss_pred cCCCcCCHHHHHHhhCCCCcEEEecCChh----hhhhc---------ccCCCcCCCcccccCChhhHHhhc-cccccccc
Q 036180 220 RVGKYVKPREWNALISDPDTVVIDVRNDY----ETRIG---------KFKGAVDPVTTAFREFPSWVEDQF-QNDKTTHK 285 (325)
Q Consensus 220 ~~gk~lsP~e~~~li~~~d~vVIDVRN~y----E~~iG---------hF~GAv~pp~~~FrEfp~~v~~~~-~~~~~~~~ 285 (325)
.....|+++++.++|++++++|||||... |+..| |||||++++...+.++....+..+ +.+.
T Consensus 33 ~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~~~e~~~G~~~~~~~~~HIPGAv~ip~~~~~~l~~~~~~~~~~~l~---- 108 (162)
T TIGR03865 33 KGARVLDTEAAQALLARGPVALIDVYPRPPKPKNLLEGTVWRDEPRLNIPGSLWLPNTGYGNLAPAWQAYFRRGLE---- 108 (162)
T ss_pred CCccccCHHHHHHHHhCCCcEEEECCCCccccccccccceeccccCCCCCCcEEecccCCCCCCCchhHHHHHHHH----
Confidence 44589999999999999899999999854 55544 999999988544444432111111 0000
Q ss_pred cccccccccccccccCCCCCCCCCeEEEEcCCCc-ccccC
Q 036180 286 ESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGI-RCEKA 324 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGI-RCEKA 324 (325)
.+ ....++++|++||.+|. |+..|
T Consensus 109 --------~~-------~~~~~d~~IVvYC~~G~~~S~~a 133 (162)
T TIGR03865 109 --------RA-------TGGDKDRPLVFYCLADCWMSWNA 133 (162)
T ss_pred --------Hh-------cCCCCCCEEEEEECCCCHHHHHH
Confidence 00 00126789999999997 76543
No 36
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=98.78 E-value=5.3e-09 Score=103.31 Aligned_cols=74 Identities=23% Similarity=0.347 Sum_probs=58.9
Q ss_pred CCCcCCHHHHHHhhCCC-CcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccc
Q 036180 221 VGKYVKPREWNALISDP-DTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKE 299 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~~-d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
....++++|+.++++++ ++++||||+..||+.|||+||+++|...+... .. +..+
T Consensus 285 ~~~~Is~~el~~~l~~~~~~~lIDvR~~~ef~~ghIpGAinip~~~l~~~-~~----~~~l------------------- 340 (392)
T PRK07878 285 AGSTITPRELKEWLDSGKKIALIDVREPVEWDIVHIPGAQLIPKSEILSG-EA----LAKL------------------- 340 (392)
T ss_pred CCCccCHHHHHHHHhCCCCeEEEECCCHHHHhcCCCCCCEEcChHHhcch-hH----HhhC-------------------
Confidence 45789999999999764 58999999999999999999999998776431 11 1111
Q ss_pred cCCCCCCCCCeEEEEcCCCcccccC
Q 036180 300 VGSPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 300 ~~~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
+++++|++||.+|.|+..|
T Consensus 341 ------~~d~~iVvyC~~G~rS~~a 359 (392)
T PRK07878 341 ------PQDRTIVLYCKTGVRSAEA 359 (392)
T ss_pred ------CCCCcEEEEcCCChHHHHH
Confidence 2567899999999998764
No 37
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=98.77 E-value=2.9e-09 Score=104.17 Aligned_cols=71 Identities=24% Similarity=0.362 Sum_probs=56.3
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCC
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
+.++++++.+++.+ +.++||||+..||..||||||+++|...|++ |+... ..
T Consensus 3 ~~is~~el~~~l~~-~~~ivDvR~~~e~~~ghIpgAi~ip~~~l~~---~~~~~---~~--------------------- 54 (376)
T PRK08762 3 REISPAEARARAAQ-GAVLIDVREAHERASGQAEGALRIPRGFLEL---RIETH---LP--------------------- 54 (376)
T ss_pred ceeCHHHHHHHHhC-CCEEEECCCHHHHhCCcCCCCEECCHHHHHH---HHhhh---cC---------------------
Confidence 57899999999976 4899999999999999999999999865543 22210 00
Q ss_pred CCCCCCCeEEEEcCCCcccccC
Q 036180 303 PEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEKA 324 (325)
+++++|++||.+|.|+..|
T Consensus 55 ---~~~~~IvvyC~~G~rs~~a 73 (376)
T PRK08762 55 ---DRDREIVLICASGTRSAHA 73 (376)
T ss_pred ---CCCCeEEEEcCCCcHHHHH
Confidence 2567999999999998654
No 38
>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.
Probab=98.74 E-value=5.9e-09 Score=78.46 Aligned_cols=65 Identities=28% Similarity=0.479 Sum_probs=48.8
Q ss_pred HHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCC
Q 036180 230 WNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPK 309 (325)
Q Consensus 230 ~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k 309 (325)
+.+++.++++++||+|+..||+.||++||+++|...+.... .... ..+++
T Consensus 2 ~~~~~~~~~~~iiD~R~~~~~~~~~i~ga~~~~~~~~~~~~-----~~~~-------------------------~~~~~ 51 (89)
T cd00158 2 LKELLDDEDAVLLDVREPEEYAAGHIPGAINIPLSELEERA-----ALLE-------------------------LDKDK 51 (89)
T ss_pred hHHHhcCCCeEEEECCCHHHHhccccCCCEecchHHHhhHH-----Hhhc-------------------------cCCCC
Confidence 44566677899999999999999999999999987654321 0000 12568
Q ss_pred eEEEEcCCCcccccC
Q 036180 310 RVAMYCTGGIRCEKA 324 (325)
Q Consensus 310 ~IvmYCTGGIRCEKA 324 (325)
+|++||.+|.|+..+
T Consensus 52 ~vv~~c~~~~~a~~~ 66 (89)
T cd00158 52 PIVVYCRSGNRSARA 66 (89)
T ss_pred eEEEEeCCCchHHHH
Confidence 999999999887543
No 39
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=98.73 E-value=4.7e-09 Score=85.85 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=44.9
Q ss_pred CCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEc
Q 036180 236 DPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYC 315 (325)
Q Consensus 236 ~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYC 315 (325)
..+..+||||+..||..||++||+++|...+.+ ++.. .. ..++++|++||
T Consensus 16 ~~~~~lIDvR~~~ef~~ghIpgAinip~~~l~~---~l~~----~~-----------------------~~~~~~vvlyC 65 (101)
T TIGR02981 16 FAAEHWIDVRIPEQYQQEHIQGAINIPLKEIKE---HIAT----AV-----------------------PDKNDTVKLYC 65 (101)
T ss_pred ccCCEEEECCCHHHHhcCCCCCCEECCHHHHHH---HHHH----hC-----------------------CCCCCeEEEEe
Confidence 346789999999999999999999999876543 2221 10 02467899999
Q ss_pred CCCcccccC
Q 036180 316 TGGIRCEKA 324 (325)
Q Consensus 316 TGGIRCEKA 324 (325)
.+|.|+..+
T Consensus 66 ~~G~rS~~a 74 (101)
T TIGR02981 66 NAGRQSGMA 74 (101)
T ss_pred CCCHHHHHH
Confidence 999998654
No 40
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=98.71 E-value=1.8e-08 Score=94.65 Aligned_cols=45 Identities=31% Similarity=0.332 Sum_probs=39.7
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCC----------hhhhhhcccCCCcCCCccccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRN----------DYETRIGKFKGAVDPVTTAFR 267 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN----------~yE~~iGhF~GAv~pp~~~Fr 267 (325)
..++++++++++++++++|||||+ ..||+.||||||++.+...+.
T Consensus 5 ~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~~ 59 (281)
T PRK11493 5 WFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALS 59 (281)
T ss_pred cccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHhc
Confidence 468999999999999999999997 688999999999999865543
No 41
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=98.68 E-value=6.2e-09 Score=85.79 Aligned_cols=60 Identities=20% Similarity=0.271 Sum_probs=45.8
Q ss_pred CCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEE
Q 036180 235 SDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMY 314 (325)
Q Consensus 235 ~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmY 314 (325)
...+-++||||+..||+.||++||+|+|...|.+ +++. .. ..++++|++|
T Consensus 17 ~~~~~~lIDvR~~~ef~~ghIpGAiniP~~~l~~---~l~~----l~-----------------------~~~~~~IVly 66 (104)
T PRK10287 17 VFAAEHWIDVRVPEQYQQEHVQGAINIPLKEVKE---RIAT----AV-----------------------PDKNDTVKLY 66 (104)
T ss_pred ccCCCEEEECCCHHHHhcCCCCccEECCHHHHHH---HHHh----cC-----------------------CCCCCeEEEE
Confidence 3567789999999999999999999999876542 3332 10 0245789999
Q ss_pred cCCCcccccC
Q 036180 315 CTGGIRCEKA 324 (325)
Q Consensus 315 CTGGIRCEKA 324 (325)
|.+|.|+..+
T Consensus 67 C~~G~rS~~a 76 (104)
T PRK10287 67 CNAGRQSGQA 76 (104)
T ss_pred eCCChHHHHH
Confidence 9999998654
No 42
>PRK11784 tRNA 2-selenouridine synthase; Provisional
Probab=98.65 E-value=2.2e-08 Score=98.11 Aligned_cols=40 Identities=30% Similarity=0.379 Sum_probs=34.5
Q ss_pred CHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccc
Q 036180 226 KPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAF 266 (325)
Q Consensus 226 sP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~F 266 (325)
+..+|.+++. ++++|||||++.||..||||||+|+|+.+.
T Consensus 4 ~~~~~~~~~~-~~~~lIDVRsp~Ef~~ghIpgAiniPl~~~ 43 (345)
T PRK11784 4 DAQDFRALFL-NDTPLIDVRSPIEFAEGHIPGAINLPLLND 43 (345)
T ss_pred cHHHHHHHHh-CCCEEEECCCHHHHhcCCCCCeeeCCCCCh
Confidence 4678888764 578999999999999999999999999543
No 43
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.
Probab=98.56 E-value=3.5e-08 Score=95.50 Aligned_cols=29 Identities=28% Similarity=0.229 Sum_probs=26.3
Q ss_pred CcEEEecCChhhhhhcccCCCcCCCcccc
Q 036180 238 DTVVIDVRNDYETRIGKFKGAVDPVTTAF 266 (325)
Q Consensus 238 d~vVIDVRN~yE~~iGhF~GAv~pp~~~F 266 (325)
+.+|||||.+.||..||||||+|+|+.+.
T Consensus 2 ~~~liDVRsp~Ef~~ghipgAiniPl~~~ 30 (311)
T TIGR03167 2 FDPLIDVRSPAEFAEGHLPGAINLPLLND 30 (311)
T ss_pred CCEEEECCCHHHHhcCCCcCCEecccccc
Confidence 46899999999999999999999999543
No 44
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=98.55 E-value=5.9e-08 Score=93.37 Aligned_cols=77 Identities=14% Similarity=0.170 Sum_probs=54.9
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhh-----------hhcccCCCcCCCcccccCC------hhhHHhhccccccccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYET-----------RIGKFKGAVDPVTTAFREF------PSWVEDQFQNDKTTHK 285 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~-----------~iGhF~GAv~pp~~~FrEf------p~~v~~~~~~~~~~~~ 285 (325)
..++.+++.+.+.++++++||+|+..|| +.||||||++++...+.+. ++-+++.+...
T Consensus 190 ~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~~~~~~~~~~~~el~~~~~~~----- 264 (320)
T PLN02723 190 LVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQMLDSSQTLLPAEELKKRFEQE----- 264 (320)
T ss_pred ceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHhcCCCCCCCCHHHHHHHHHhc-----
Confidence 3568899999998888999999999887 5799999999998655331 11122111110
Q ss_pred cccccccccccccccCCCCCCCCCeEEEEcCCCcccc
Q 036180 286 ESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCE 322 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCE 322 (325)
| -.++++|++||++|+|..
T Consensus 265 -------g-----------i~~~~~iv~yC~sG~~A~ 283 (320)
T PLN02723 265 -------G-----------ISLDSPIVASCGTGVTAC 283 (320)
T ss_pred -------C-----------CCCCCCEEEECCcHHHHH
Confidence 1 025678999999999864
No 45
>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase. This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.
Probab=98.46 E-value=3.7e-07 Score=76.03 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=37.6
Q ss_pred CCHHHHHHhhCC--CCcEEEecCChhhhhhcccCCCcCCCccc
Q 036180 225 VKPREWNALISD--PDTVVIDVRNDYETRIGKFKGAVDPVTTA 265 (325)
Q Consensus 225 lsP~e~~~li~~--~d~vVIDVRN~yE~~iGhF~GAv~pp~~~ 265 (325)
|+|+++.+++.+ ++++|||||...||..||++||++++...
T Consensus 2 is~~~l~~~l~~~~~~~~iiDvR~~~~~~~~hI~~ai~i~~~~ 44 (132)
T cd01446 2 IDCAWLAALLREGGERLLLLDCRPFLEYSSSHIRGAVNVCCPT 44 (132)
T ss_pred cCHHHHHHHHhcCCCCEEEEECCCHHHHhhCcccCcEecChHH
Confidence 789999999975 47999999999999999999999999874
No 46
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=98.38 E-value=1.8e-07 Score=91.46 Aligned_cols=70 Identities=26% Similarity=0.292 Sum_probs=53.7
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCC
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGS 302 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
..++++++.++. .+.++||||+..||..|||+||+++|...+.+. |.. ...
T Consensus 261 ~~i~~~~~~~~~--~~~~IIDVR~~~ef~~ghIpgAinip~~~l~~~--~~~---~~~---------------------- 311 (355)
T PRK05597 261 EVLDVPRVSALP--DGVTLIDVREPSEFAAYSIPGAHNVPLSAIREG--ANP---PSV---------------------- 311 (355)
T ss_pred cccCHHHHHhcc--CCCEEEECCCHHHHccCcCCCCEEeCHHHhhhc--ccc---ccC----------------------
Confidence 468888988664 358999999999999999999999998765431 110 000
Q ss_pred CCCCCCCeEEEEcCCCcccccC
Q 036180 303 PEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 303 ~~k~k~k~IvmYCTGGIRCEKA 324 (325)
.++++|++||.+|.|+.+|
T Consensus 312 ---~~~~~IvvyC~~G~rS~~A 330 (355)
T PRK05597 312 ---SAGDEVVVYCAAGVRSAQA 330 (355)
T ss_pred ---CCCCeEEEEcCCCHHHHHH
Confidence 2467899999999998765
No 47
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=98.35 E-value=4.1e-07 Score=85.53 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=51.9
Q ss_pred CCHHHHHHhhCCCCcEEEecCChhhhh-----------hcccCCCcCCCcccccCC-----hhhHHhhcccccccccccc
Q 036180 225 VKPREWNALISDPDTVVIDVRNDYETR-----------IGKFKGAVDPVTTAFREF-----PSWVEDQFQNDKTTHKESK 288 (325)
Q Consensus 225 lsP~e~~~li~~~d~vVIDVRN~yE~~-----------iGhF~GAv~pp~~~FrEf-----p~~v~~~~~~~~~~~~~~~ 288 (325)
.+-+++.+.+.++++++||+|...||. .||||||++++...+.+. +.-++..+..
T Consensus 155 ~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~~~~~~~~~~l~~~~~~--------- 225 (281)
T PRK11493 155 VRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDELDAIFFG--------- 225 (281)
T ss_pred ecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcCCCCcCCHHHHHHHHHh---------
Confidence 345677777777789999999999984 699999999997665431 1222221111
Q ss_pred ccccccccccccCCCCCCCCCeEEEEcCCCcccc
Q 036180 289 VEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCE 322 (325)
Q Consensus 289 ~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCE 322 (325)
.|- .++++|++||.+|+|..
T Consensus 226 ---~g~-----------~~~~~ii~yC~~G~~A~ 245 (281)
T PRK11493 226 ---RGV-----------SFDRPIIASCGSGVTAA 245 (281)
T ss_pred ---cCC-----------CCCCCEEEECCcHHHHH
Confidence 110 24678999999999974
No 48
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=98.32 E-value=7.3e-07 Score=76.32 Aligned_cols=42 Identities=14% Similarity=0.037 Sum_probs=36.0
Q ss_pred CCHHHHHHhhC----CCCcEEEecCCh--------hhhhh------------cccCCCcCCCcccc
Q 036180 225 VKPREWNALIS----DPDTVVIDVRND--------YETRI------------GKFKGAVDPVTTAF 266 (325)
Q Consensus 225 lsP~e~~~li~----~~d~vVIDVRN~--------yE~~i------------GhF~GAv~pp~~~F 266 (325)
|+++++.+.++ ++++++||+|.. .||.. ||||||++++...+
T Consensus 1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~ 66 (138)
T cd01445 1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEEC 66 (138)
T ss_pred CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHh
Confidence 57899999998 578999999976 77877 99999999997655
No 49
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=98.31 E-value=8.1e-07 Score=92.96 Aligned_cols=43 Identities=14% Similarity=0.294 Sum_probs=39.4
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTA 265 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~ 265 (325)
..|+++++++++++++++|||||...||..||||||++++.+.
T Consensus 9 ~lIs~~eL~~~l~~~~vvIIDvR~~~eY~~GHIPGAv~i~~~~ 51 (610)
T PRK09629 9 LVIEPNDLLERLDAPELILVDLTSSARYEAGHIRGARFVDPKR 51 (610)
T ss_pred ceecHHHHHHHhcCCCEEEEECCChHHHHhCCCCCcEEcChhH
Confidence 4689999999999999999999999999999999999998643
No 50
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=98.28 E-value=3.1e-07 Score=79.30 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=44.7
Q ss_pred HHHhhC-CCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCC
Q 036180 230 WNALIS-DPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMP 308 (325)
Q Consensus 230 ~~~li~-~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~ 308 (325)
+.+++. +.+++|||||...||+.||||||++++...|.+ .+. .+ ..+
T Consensus 2 l~~~l~~~~~~~ivDvR~~~e~~~gHIpgAi~~~~~~l~~---~l~----~l-------------------------~~~ 49 (145)
T cd01535 2 LAAWLGEGGQTAVVDVTASANYVKRHIPGAWWVLRAQLAQ---ALE----KL-------------------------PAA 49 (145)
T ss_pred hHHHHhCCCCeEEEECCCHHHHHcCCCCCceeCCHHHHHH---HHH----hc-------------------------CCC
Confidence 344554 345899999999999999999999997654432 222 11 135
Q ss_pred CeEEEEcCCCccccc
Q 036180 309 KRVAMYCTGGIRCEK 323 (325)
Q Consensus 309 k~IvmYCTGGIRCEK 323 (325)
++|++||.+|.++..
T Consensus 50 ~~vVv~c~~g~~a~~ 64 (145)
T cd01535 50 ERYVLTCGSSLLARF 64 (145)
T ss_pred CCEEEEeCCChHHHH
Confidence 689999999987653
No 51
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=98.27 E-value=8.2e-07 Score=92.91 Aligned_cols=78 Identities=18% Similarity=0.082 Sum_probs=55.6
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhh--------hcccCCCcCCCcccccCC------hhhHHhhcccccccccccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETR--------IGKFKGAVDPVTTAFREF------PSWVEDQFQNDKTTHKESK 288 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~--------iGhF~GAv~pp~~~FrEf------p~~v~~~~~~~~~~~~~~~ 288 (325)
..++++++.+.+++++++|||+|...||. .||||||++++...+.+. ++-+.+.+...
T Consensus 147 ~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~~~~~r~GHIPGAvnip~~~~~~~~~~lk~~~el~~~~~~~-------- 218 (610)
T PRK09629 147 PTATREYLQSRLGAADLAIWDARAPTEYSGEKVVAAKGGHIPGAVNFEWTAGMDKARNLRIRQDMPEILRDL-------- 218 (610)
T ss_pred ccccHHHHHHhhCCCCcEEEECCCccccCCcccccccCCCCCCCeecCHHHhcCCCCCCCCHHHHHHHHHHc--------
Confidence 46788999999988899999999999994 799999999997543221 11122222111
Q ss_pred ccccccccccccCCCCCCCCCeEEEEcCCCccccc
Q 036180 289 VEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCEK 323 (325)
Q Consensus 289 ~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCEK 323 (325)
| -.++++|++||.+|.|...
T Consensus 219 ----G-----------i~~~~~VVvYC~sG~rAa~ 238 (610)
T PRK09629 219 ----G-----------ITPDKEVITHCQTHHRSGF 238 (610)
T ss_pred ----C-----------CCCCCCEEEECCCChHHHH
Confidence 1 0256789999999998643
No 52
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=98.27 E-value=1.2e-06 Score=84.46 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=39.9
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecC--------Ch-hhhhhcccCCCcCCCcccccC
Q 036180 222 GKYVKPREWNALISDPDTVVIDVR--------ND-YETRIGKFKGAVDPVTTAFRE 268 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVR--------N~-yE~~iGhF~GAv~pp~~~FrE 268 (325)
...|+++++++++++++++||||| +. .||..||||||++++...|.+
T Consensus 21 ~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~~ 76 (320)
T PLN02723 21 EPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISD 76 (320)
T ss_pred CceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhcC
Confidence 368999999999998899999996 33 689999999999998765544
No 53
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=98.25 E-value=1.8e-06 Score=83.14 Aligned_cols=78 Identities=22% Similarity=0.307 Sum_probs=57.7
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhh----------cccCCCcCCCcccccCC------hhhHHhhccccccccc
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRI----------GKFKGAVDPVTTAFREF------PSWVEDQFQNDKTTHK 285 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~i----------GhF~GAv~pp~~~FrEf------p~~v~~~~~~~~~~~~ 285 (325)
-..++.+++...++.+..++||+|++.||.= ||||||+|+|-..+-+- ++.+...++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~liDaR~~~rf~G~~~ep~~~~~GHIPGAiNipw~~~~~~~~~~~~~~~~~~l~~------- 227 (285)
T COG2897 155 KAVVDATLVADALEVPAVLLIDARSPERFRGKEPEPRDGKAGHIPGAINIPWTDLVDDGGLFKSPEEIARLYA------- 227 (285)
T ss_pred cccCCHHHHHHHhcCCCeEEEecCCHHHhCCCCCCCCCCCCCCCCCCcCcCHHHHhcCCCccCcHHHHHHHHH-------
Confidence 3567788999999999999999999999998 99999999998776651 111111110
Q ss_pred cccccccccccccccCCCCCCCCCeEEEEcCCCcccc
Q 036180 286 ESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCE 322 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCE 322 (325)
.-| -..+++|++||..|.|..
T Consensus 228 -----~~g-----------i~~~~~vI~yCgsG~~As 248 (285)
T COG2897 228 -----DAG-----------IDPDKEVIVYCGSGVRAS 248 (285)
T ss_pred -----hcC-----------CCCCCCEEEEcCCchHHH
Confidence 011 135789999999999863
No 54
>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional
Probab=98.18 E-value=7.3e-07 Score=90.49 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=45.1
Q ss_pred CCcEEEecCChhhhhhcccCC----CcCCCcccccCChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEE
Q 036180 237 PDTVVIDVRNDYETRIGKFKG----AVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVA 312 (325)
Q Consensus 237 ~d~vVIDVRN~yE~~iGhF~G----Av~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~Iv 312 (325)
++.++||||++.||+.||++| |+++|...+.+ ++ ..+ +++++|+
T Consensus 406 ~~~~lIDVR~~~E~~~~hI~g~~~~a~niP~~~l~~---~~----~~l-------------------------~~~~~ii 453 (482)
T PRK01269 406 PDDVIIDIRSPDEQEDKPLKLEGVEVKSLPFYKLST---QF----GDL-------------------------DQSKTYL 453 (482)
T ss_pred CCCEEEECCCHHHHhcCCCCCCCceEEECCHHHHHH---HH----hhc-------------------------CCCCeEE
Confidence 568999999999999999999 99999877643 11 111 2467899
Q ss_pred EEcCCCcccccC
Q 036180 313 MYCTGGIRCEKA 324 (325)
Q Consensus 313 mYCTGGIRCEKA 324 (325)
+||.+|.|+..|
T Consensus 454 vyC~~G~rS~~a 465 (482)
T PRK01269 454 LYCDRGVMSRLQ 465 (482)
T ss_pred EECCCCHHHHHH
Confidence 999999998765
No 55
>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.02 E-value=4.4e-06 Score=81.86 Aligned_cols=62 Identities=27% Similarity=0.407 Sum_probs=51.0
Q ss_pred ccccCCCCCCccccCCCcCCHHHHHHhhCCC------CcEEEecCChhhhhhcccCCCcCCCcccccC
Q 036180 207 IVTLGMPTVAPIERVGKYVKPREWNALISDP------DTVVIDVRNDYETRIGKFKGAVDPVTTAFRE 268 (325)
Q Consensus 207 IVtlGl~~~dp~~~~gk~lsP~e~~~li~~~------d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrE 268 (325)
.|.+-+|.+++....-++|+|+.++.+|... ..++||+|=+|||.-|||+||+|+....+-+
T Consensus 140 s~~y~Lptv~~k~~~~k~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY~GGHIkgavnl~~~~~~~ 207 (325)
T KOG3772|consen 140 SKAYLLPTVDGKSQDLKYISPETLKGLLQGKFSDFFDKFIIIDCRYPYEYEGGHIKGAVNLYSKELLQ 207 (325)
T ss_pred ccceeccccCcccccccccCHHHHHHHHHhccccceeeEEEEEeCCcccccCcccccceecccHhhhh
Confidence 3556667777766677999999999999752 3668999999999999999999999876543
No 56
>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]
Probab=97.42 E-value=0.00011 Score=73.28 Aligned_cols=76 Identities=18% Similarity=0.363 Sum_probs=58.2
Q ss_pred CcCCHHHHHHhhCC-CCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhhccccccccccccccccccccccccC
Q 036180 223 KYVKPREWNALISD-PDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQFQNDKTTHKESKVEITDEITDKEVG 301 (325)
Q Consensus 223 k~lsP~e~~~li~~-~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (325)
..|+..||++++++ +.-++||||..-||+|-|+|+|+|+|+.+.+..-. ++.+. .+-
T Consensus 317 ~Rvsv~d~k~il~~~~~h~llDvRp~~~~eI~~lP~avNIPL~~l~~~~~---~~~~~--------------~~~----- 374 (427)
T KOG2017|consen 317 ERVSVTDYKRILDSGAKHLLLDVRPSHEYEICRLPEAVNIPLKELRSRSG---KKLQG--------------DLN----- 374 (427)
T ss_pred hcccHHHHHHHHhcCCCeEEEeccCcceEEEEecccccccchhhhhhhhh---hhhcc--------------ccc-----
Confidence 46788999999987 67999999999999999999999999988775421 11111 000
Q ss_pred CCCCCCCCeEEEEcCCCcccccC
Q 036180 302 SPEKRMPKRVAMYCTGGIRCEKA 324 (325)
Q Consensus 302 ~~~k~k~k~IvmYCTGGIRCEKA 324 (325)
...++|.+.|.-|+-+.+|
T Consensus 375 ----~~~~~I~ViCrrGNdSQ~A 393 (427)
T KOG2017|consen 375 ----TESKDIFVICRRGNDSQRA 393 (427)
T ss_pred ----ccCCCEEEEeCCCCchHHH
Confidence 1356799999999877654
No 57
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=96.06 E-value=0.028 Score=44.85 Aligned_cols=52 Identities=19% Similarity=0.364 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCC
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKG 161 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~ 161 (325)
-+|.+.++.+.++||+|-|.=..+| |-..+.|+.+.++.|++||+..+..+.
T Consensus 18 gFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~a~ 70 (91)
T PF00708_consen 18 GFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPPAR 70 (91)
T ss_dssp SHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTTSE
T ss_pred ChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCCcE
Confidence 4799999999999999999999999 999999999999999999998765543
No 58
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=95.78 E-value=0.013 Score=50.13 Aligned_cols=31 Identities=19% Similarity=0.077 Sum_probs=25.2
Q ss_pred CCCcCCHHHHHHhhCCCCcEEEecCChhhhh
Q 036180 221 VGKYVKPREWNALISDPDTVVIDVRNDYETR 251 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~~d~vVIDVRN~yE~~ 251 (325)
++..++++++..+-+.+=..|||.|.+.|..
T Consensus 11 ~s~qlt~~d~~~L~~~GiktVIdlR~~~E~~ 41 (135)
T TIGR01244 11 VSPQLTKADAAQAAQLGFKTVINNRPDREEE 41 (135)
T ss_pred EcCCCCHHHHHHHHHCCCcEEEECCCCCCCC
Confidence 4578999999988666668999999988743
No 59
>PRK14420 acylphosphatase; Provisional
Probab=95.73 E-value=0.036 Score=44.66 Aligned_cols=53 Identities=13% Similarity=0.225 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||+|-|.=-..| |=..+.|+.+.|++|+++|++.|.++.+
T Consensus 16 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~p~~a~V 69 (91)
T PRK14420 16 GFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKGSPFSKV 69 (91)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhCCCCCEE
Confidence 4788999999999999999999999 9999999999999999999988877644
No 60
>PRK14429 acylphosphatase; Provisional
Probab=95.59 E-value=0.041 Score=44.43 Aligned_cols=53 Identities=13% Similarity=0.223 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||+|-|.=-..| |=..+.|+.+++++|+++|+..|.++.+
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 69 (90)
T PRK14429 16 GCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVGVPCTEV 69 (90)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 3688999999999999999999999 9999999999999999999987776644
No 61
>PRK14447 acylphosphatase; Provisional
Probab=95.57 E-value=0.038 Score=45.15 Aligned_cols=53 Identities=17% Similarity=0.310 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC--ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG--INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG--INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+.++.++||+|-+.=-..| |-..+.|+.+++++|+++|+..|.++.+
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~~gp~~a~V 72 (95)
T PRK14447 18 FFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWARVGPPGARV 72 (95)
T ss_pred cchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCeEE
Confidence 4788999999999999999999999 9999999999999999999987776644
No 62
>PRK14448 acylphosphatase; Provisional
Probab=95.56 E-value=0.055 Score=43.80 Aligned_cols=53 Identities=11% Similarity=0.192 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+..+.++||+|-+.=-++| |-.-+.|+.++++.|+++|+..|.++.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 69 (90)
T PRK14448 16 GFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQHGPPTAVV 69 (90)
T ss_pred chHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHHhCCCceEE
Confidence 4789999999999999999999999 9999999999999999999988876544
No 63
>PRK14435 acylphosphatase; Provisional
Probab=95.24 E-value=0.077 Score=42.96 Aligned_cols=53 Identities=17% Similarity=0.234 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+.++.++||.|-+.=-++| |=..+.|+.+.++.|+++|+..|.++-+
T Consensus 16 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 69 (90)
T PRK14435 16 GFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVAKGPPAAVV 69 (90)
T ss_pred CChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4688899999999999999999999 9999999999999999999987777543
No 64
>PRK14430 acylphosphatase; Provisional
Probab=95.24 E-value=0.059 Score=43.90 Aligned_cols=53 Identities=13% Similarity=0.252 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+..+.++||+|-++=-..| +-.-+.|+.++|+.|+++|+.-|.++.+
T Consensus 18 GFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (92)
T PRK14430 18 GYRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWMEAGPPAAQV 71 (92)
T ss_pred eeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999887776644
No 65
>PRK14449 acylphosphatase; Provisional
Probab=95.20 E-value=0.074 Score=42.93 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...++++.++||+|-|.=-.+| |=..+.|+.+++++|+++|++.|.++.+
T Consensus 17 GFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~~~~~a~V 70 (90)
T PRK14449 17 GLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKTGLRWARV 70 (90)
T ss_pred ChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999988765543
No 66
>PRK14426 acylphosphatase; Provisional
Probab=95.18 E-value=0.079 Score=43.02 Aligned_cols=53 Identities=17% Similarity=0.331 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhC-cCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSD-EHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd-~rf~~l 162 (325)
-+|.+.+..+.++||+|-+.=-++| |=..+.|+.+.++.|++||+.. |.++-+
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g~P~~a~V 72 (92)
T PRK14426 18 GFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLKEGGPRSARV 72 (92)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHhcCCCCCeEE
Confidence 4789999999999999999999999 9999999999999999999987 776543
No 67
>PRK14422 acylphosphatase; Provisional
Probab=95.15 E-value=0.07 Score=43.49 Aligned_cols=53 Identities=19% Similarity=0.266 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...++++.++||+|-|.=-+.| |=.-+.|+.++|++|+++|+..|.++.+
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 73 (93)
T PRK14422 20 GFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRGDDTPGRV 73 (93)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhCCCCcEE
Confidence 4789999999999999999999999 9999999999999999999988877644
No 68
>PRK14450 acylphosphatase; Provisional
Probab=95.08 E-value=0.083 Score=42.68 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC--ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG--INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG--INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.++.+.+++|+|-+.=-.+| |=.-+.|+.++++.|++||+..|.++.+
T Consensus 16 GFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 70 (91)
T PRK14450 16 YFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLRSGPPRAEV 70 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCcEE
Confidence 4789999999999999999999999 8888999999999999999987777644
No 69
>PRK14433 acylphosphatase; Provisional
Probab=95.03 E-value=0.082 Score=42.61 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||.|-|.=-++| |=..+.|+.+++++|+++|+..|.++.+
T Consensus 15 GFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V 68 (87)
T PRK14433 15 GYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLRRGPRHARV 68 (87)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4688999999999999999999999 9999999999999999999987877644
No 70
>PRK14445 acylphosphatase; Provisional
Probab=95.01 E-value=0.078 Score=42.88 Aligned_cols=53 Identities=17% Similarity=0.296 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+..+.++||+|-|.=-..| |=..+.|+.++++.|+++|+..|.++.+
T Consensus 18 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~gP~~a~V 71 (91)
T PRK14445 18 GFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAERGPSRSSV 71 (91)
T ss_pred CChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999987776644
No 71
>PRK14440 acylphosphatase; Provisional
Probab=94.97 E-value=0.086 Score=42.74 Aligned_cols=53 Identities=19% Similarity=0.241 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.++.+.++||+|-|+=-..| |=..+.|+.++++.|++||++.|.++.+
T Consensus 17 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V 70 (90)
T PRK14440 17 GFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEV 70 (90)
T ss_pred CchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999988776644
No 72
>PRK14427 acylphosphatase; Provisional
Probab=94.91 E-value=0.11 Score=42.51 Aligned_cols=52 Identities=29% Similarity=0.353 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCC
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKG 161 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~ 161 (325)
-+|...+.++.+++|+|-+.=-.+| |=.-+.|+.++|+.|++||+..|.++.
T Consensus 20 GFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~~p~~a~ 72 (94)
T PRK14427 20 GFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNSDRAPGR 72 (94)
T ss_pred CChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhhCCCCcE
Confidence 4788999999999999999999999 999999999999999999998877653
No 73
>PRK14436 acylphosphatase; Provisional
Probab=94.87 E-value=0.093 Score=42.62 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.++++.+++|.|-|.=-.+| |-.-+.|+.+.++.|+++|+..|.++.+
T Consensus 18 GFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (91)
T PRK14436 18 GFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARV 71 (91)
T ss_pred CcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999987776543
No 74
>PRK14451 acylphosphatase; Provisional
Probab=94.85 E-value=0.095 Score=42.41 Aligned_cols=53 Identities=23% Similarity=0.364 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+..+.++||+|-+.=-..| |-.-+.|+.+++++|+.+|+..|.++.+
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 70 (89)
T PRK14451 17 WFRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQKGPLNARV 70 (89)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999987776544
No 75
>PRK14438 acylphosphatase; Provisional
Probab=94.57 E-value=0.14 Score=41.50 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||.|-|.=-+.| |=.-+.|+.+++++|++||+.-|.++-+
T Consensus 17 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 70 (91)
T PRK14438 17 AFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCHHGPSRARV 70 (91)
T ss_pred CccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999987776644
No 76
>PRK14425 acylphosphatase; Provisional
Probab=94.57 E-value=0.14 Score=41.84 Aligned_cols=53 Identities=13% Similarity=0.236 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||+|-|.=-..| |=..+.|+.+.++.|++||+..|.++.+
T Consensus 20 GFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~~gp~~a~V 73 (94)
T PRK14425 20 GFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFRRGPPGASV 73 (94)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999987776543
No 77
>PRK14432 acylphosphatase; Provisional
Probab=94.57 E-value=0.12 Score=42.22 Aligned_cols=53 Identities=9% Similarity=0.257 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEe-ecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSIC-GTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtis-G~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+.++.++||+|.|.=-..| |=.-+. |+.++++.|+++|+..|.++.+
T Consensus 16 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~gp~~a~V 70 (93)
T PRK14432 16 GFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKNGNKYSNI 70 (93)
T ss_pred eehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHhCCCccEE
Confidence 4688999999999999999999999 999996 9999999999999988877654
No 78
>PRK14421 acylphosphatase; Provisional
Probab=94.56 E-value=0.13 Score=42.63 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||.|-|.=-..| |-.-+.|+.+++++|+++|+..|.++-+
T Consensus 18 GFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V 71 (99)
T PRK14421 18 GYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCRRGPSAARV 71 (99)
T ss_pred cchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHHhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999987877654
No 79
>PRK14423 acylphosphatase; Provisional
Probab=94.50 E-value=0.13 Score=41.81 Aligned_cols=53 Identities=19% Similarity=0.303 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+.++.++||.|-+.=-..| |-..+.|+.++++.|+++|+..|.++.+
T Consensus 19 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V 72 (92)
T PRK14423 19 YYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEGSPAAVV 72 (92)
T ss_pred eehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCceEE
Confidence 4788999999999999999999999 9999999999999999999987777644
No 80
>PRK14424 acylphosphatase; Provisional
Probab=94.46 E-value=0.15 Score=41.87 Aligned_cols=53 Identities=17% Similarity=0.347 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.++.+.++||+|-|.=-+.| |=..+.|+.++++.|+++|+..|.++.+
T Consensus 21 GFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~~gp~~a~V 74 (94)
T PRK14424 21 GFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLRHGPPAARV 74 (94)
T ss_pred chHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCCcEE
Confidence 5789999999999999999999999 9999999999999999999987776644
No 81
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=94.44 E-value=0.067 Score=51.97 Aligned_cols=50 Identities=28% Similarity=0.131 Sum_probs=40.3
Q ss_pred CCcCCHHHHHHhhCCC-----CcEEEecCCh--hhhhhcccCCCcCCCcccccCChh
Q 036180 222 GKYVKPREWNALISDP-----DTVVIDVRND--YETRIGKFKGAVDPVTTAFREFPS 271 (325)
Q Consensus 222 gk~lsP~e~~~li~~~-----d~vVIDVRN~--yE~~iGhF~GAv~pp~~~FrEfp~ 271 (325)
..-|+|+-+.+.+.++ |+.+++++.. .+|..||||||+.++.+.+..-+.
T Consensus 10 ~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~~~~~Y~~~HIPGAv~~d~~~~~~~~~ 66 (285)
T COG2897 10 EFLVSPDWLAENLDDPAVVIVDARIILPDPDDAEEYLEGHIPGAVFFDWEADLSDPV 66 (285)
T ss_pred ceEEcHHHHHhhccccccccCceEEEeCCcchHHHHHhccCCCCEecCHHHhhcCCC
Confidence 3467888888888866 7777777777 899999999999999988766543
No 82
>PRK14428 acylphosphatase; Provisional
Probab=94.39 E-value=0.14 Score=42.43 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+.++.++||+|-|.=-..| |=..+.|+.+.+++|+++|+.-|.++-+
T Consensus 22 GFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~~gP~~a~V 75 (97)
T PRK14428 22 GFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLAIGPRWSEV 75 (97)
T ss_pred cchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHhhCCCccEE
Confidence 5788999999999999999999999 9999999999999999999987777644
No 83
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=94.34 E-value=0.027 Score=47.34 Aligned_cols=76 Identities=21% Similarity=0.187 Sum_probs=39.1
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhh-hcccC-----------CCcCCCcccccCC-hhhHHhhcccccccccccc
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETR-IGKFK-----------GAVDPVTTAFREF-PSWVEDQFQNDKTTHKESK 288 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~-iGhF~-----------GAv~pp~~~FrEf-p~~v~~~~~~~~~~~~~~~ 288 (325)
+..++|+++.++-+.+=..||+.|.+.|-. .+.+. ..+++|+.. .+. ++-++...+.+.
T Consensus 12 s~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~-~~~~~~~v~~f~~~l~------- 83 (110)
T PF04273_consen 12 SGQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDG-GAITEEDVEAFADALE------- 83 (110)
T ss_dssp ECS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----T-TT--HHHHHHHHHHHH-------
T ss_pred CCCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCC-CCCCHHHHHHHHHHHH-------
Confidence 458899999999888878999999997742 12211 136666642 222 222322211121
Q ss_pred ccccccccccccCCCCCCCCCeEEEEcCCCcccc
Q 036180 289 VEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCE 322 (325)
Q Consensus 289 ~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCE 322 (325)
..++||++||..|.||.
T Consensus 84 -----------------~~~~Pvl~hC~sG~Ra~ 100 (110)
T PF04273_consen 84 -----------------SLPKPVLAHCRSGTRAS 100 (110)
T ss_dssp -----------------TTTTSEEEE-SCSHHHH
T ss_pred -----------------hCCCCEEEECCCChhHH
Confidence 14679999999999984
No 84
>PRK14444 acylphosphatase; Provisional
Probab=94.28 E-value=0.16 Score=41.35 Aligned_cols=53 Identities=19% Similarity=0.309 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+..+.+|||.|-|.=-.+| |=..+.|+.+.++.|+++|+..|.++.+
T Consensus 18 GFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (92)
T PRK14444 18 NFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYSGPSHARV 71 (92)
T ss_pred CcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999977776543
No 85
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=93.97 E-value=0.21 Score=41.07 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+..+.+|||+|.++-=..| |=.-..|+.++++.|++||+..|.++..
T Consensus 18 GFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~~g~~~a~V 71 (92)
T COG1254 18 GFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLRKGPPAAKV 71 (92)
T ss_pred cHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHHhCCCceEE
Confidence 5789999999999999999999999 9999999999999999999977777654
No 86
>PRK14452 acylphosphatase; Provisional
Probab=93.95 E-value=0.22 Score=41.88 Aligned_cols=54 Identities=13% Similarity=0.149 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
--+|.+.+.++.++||+|-|.=-..| |-.-+.|+.+++++|++++...|.++-+
T Consensus 33 VGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~gP~~A~V 87 (107)
T PRK14452 33 VGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERGPPGARV 87 (107)
T ss_pred cChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcCCCCcEE
Confidence 46899999999999999999999999 9999999999999999999988877644
No 87
>PRK14437 acylphosphatase; Provisional
Probab=93.89 E-value=0.19 Score=42.39 Aligned_cols=54 Identities=19% Similarity=0.373 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
--+|.+.+.++.++||+|-|.=-..| |=.-+.|+.+.|+.|+++|+..|.++.+
T Consensus 36 VGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~~gP~~a~V 90 (109)
T PRK14437 36 VFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAV 90 (109)
T ss_pred cCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCceEE
Confidence 46899999999999999999999999 9999999999999999999987776644
No 88
>PRK14446 acylphosphatase; Provisional
Probab=93.83 E-value=0.13 Score=41.74 Aligned_cols=52 Identities=12% Similarity=0.187 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 111 LRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 111 lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
+|...+.++.+++|+|.+.=-++| +-.-+.|+.+.++.|+++|+.-|.++-+
T Consensus 17 FR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~~gP~~a~V 69 (88)
T PRK14446 17 YRASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLWQGPPAATV 69 (88)
T ss_pred EhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHhhCCCceEE
Confidence 678888999999999999999999 9999999999999999999987776644
No 89
>PRK14442 acylphosphatase; Provisional
Probab=93.59 E-value=0.25 Score=40.10 Aligned_cols=53 Identities=9% Similarity=0.209 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|...+..+.++||+|-|.=-..| |=.-+.|+.+.++.|+.||+..|.++-+
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 71 (91)
T PRK14442 18 GFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLGRGPRHAEV 71 (91)
T ss_pred cccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCeEE
Confidence 4688889999999999999999999 9999999999999999999987776644
No 90
>PRK14431 acylphosphatase; Provisional
Probab=93.20 E-value=0.28 Score=39.76 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCc-CCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDE-HLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~-rf~~l 162 (325)
-+|...++.+.++||+|-+.=-.+||=..+.|+.+++++|++||+..| .++.+
T Consensus 16 GFR~~~~~~A~~~gl~G~V~N~~dgVei~~qG~~~~l~~f~~~l~~g~p~~a~V 69 (89)
T PRK14431 16 GFRYFTQRIAMNYNIVGTVQNVDDYVEIYAQGDDADLERFIQGVIEGASPASNV 69 (89)
T ss_pred eEhHHHHHHHhhcCCEEEEEECCCcEEEEEEcCHHHHHHHHHHHhcCCCCcEEE
Confidence 367888899999999999999999999999999999999999999865 45543
No 91
>PRK14441 acylphosphatase; Provisional
Probab=93.12 E-value=0.31 Score=39.72 Aligned_cols=53 Identities=17% Similarity=0.302 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~rf~~l 162 (325)
-+|.+.+..+.++||+|-|.=-+.| |=.-+.|+.+.++.|+++|+..|.++.+
T Consensus 19 GFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V 72 (93)
T PRK14441 19 AFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCHAGPPAARV 72 (93)
T ss_pred cchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEE
Confidence 4788999999999999999999999 9999999999999999999987776544
No 92
>PRK14434 acylphosphatase; Provisional
Probab=92.81 E-value=0.29 Score=39.88 Aligned_cols=53 Identities=11% Similarity=0.176 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhC-CeeEEEeccCC-ceeeEeecH-HHHHHHHHHHHhCc-CCCCc
Q 036180 110 NLRKPLKRLCEELR-VSGGIILAPEG-INGSICGTR-ESVERVLGFIQSDE-HLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~-l~GrI~IA~EG-INgtisG~~-e~i~~~~~~l~sd~-rf~~l 162 (325)
-+|...+.++.++| |+|.|+=-.+| +=.-+.|+. ++++.|++||+..+ .++-+
T Consensus 16 GFR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V 72 (92)
T PRK14434 16 GFRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKV 72 (92)
T ss_pred eEhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEE
Confidence 36888899999999 99999999999 999999986 69999999999865 36544
No 93
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=92.63 E-value=0.34 Score=40.60 Aligned_cols=47 Identities=21% Similarity=0.398 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHh
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQS 155 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~s 155 (325)
..+|.+-+..|+.|||+|=|.=..|| |-|++.|+.+.++.+..||..
T Consensus 21 v~fr~~t~~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~ 68 (98)
T KOG3360|consen 21 VCFRKHTLDEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLT 68 (98)
T ss_pred chhhHHHHHHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 46888999999999999999999999 999999999999999999985
No 94
>PRK14443 acylphosphatase; Provisional
Probab=90.11 E-value=1 Score=37.07 Aligned_cols=53 Identities=13% Similarity=0.208 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHhCcC-CCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQSDEH-LKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~sd~r-f~~l 162 (325)
-+|...+..+.+++|+|-|.=-+.| |=.-+.|+.+.++.|+++|+..|. ++.+
T Consensus 18 GFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~g~p~~a~V 72 (93)
T PRK14443 18 GFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKKGPSPGCRI 72 (93)
T ss_pred cCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhcCCCCcEEE
Confidence 4688899999999999999999999 999999999999999999998663 6543
No 95
>PRK14439 acylphosphatase; Provisional
Probab=89.50 E-value=1.1 Score=40.70 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCC-ceeeEeecHHHHHHHHHHHHh-CcCCC
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEG-INGSICGTRESVERVLGFIQS-DEHLK 160 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EG-INgtisG~~e~i~~~~~~l~s-d~rf~ 160 (325)
-+|...++.+.++||+|-|.=-++| |-..+.|+.+.|+.|+++|+. -|.++
T Consensus 89 GFR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~~gPp~A 141 (163)
T PRK14439 89 GFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSA 141 (163)
T ss_pred CchHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCCe
Confidence 5789999999999999999999999 999999999999999999997 46554
No 96
>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]
Probab=87.74 E-value=0.28 Score=49.26 Aligned_cols=46 Identities=22% Similarity=0.306 Sum_probs=39.8
Q ss_pred ccCCCcCCHHHHHHhhCCC------CcEEEecCChhhhhhcccCCCcCCCcc
Q 036180 219 ERVGKYVKPREWNALISDP------DTVVIDVRNDYETRIGKFKGAVDPVTT 264 (325)
Q Consensus 219 ~~~gk~lsP~e~~~li~~~------d~vVIDVRN~yE~~iGhF~GAv~pp~~ 264 (325)
++.-+.|+++.++.+++.. +.++||.|=.|||.-|||-+|||+..+
T Consensus 238 ~Ds~~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY~GGHIinaVNi~s~ 289 (427)
T COG5105 238 SDSIQRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEYRGGHIINAVNISST 289 (427)
T ss_pred ccchhhcCHHHHHHHHhchhhhhhhceeEEeecceeeecCceeeeeeecchH
Confidence 3456789999999998752 578999999999999999999999875
No 97
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=87.45 E-value=0.31 Score=39.91 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=18.0
Q ss_pred cCCHHHHHHhhCCCCcEEEecCChhhh
Q 036180 224 YVKPREWNALISDPDTVVIDVRNDYET 250 (325)
Q Consensus 224 ~lsP~e~~~li~~~d~vVIDVRN~yE~ 250 (325)
.-.+.++..+.+.+=..|||+++..|.
T Consensus 14 ~~~~~d~~~L~~~gi~~VI~l~~~~~~ 40 (139)
T cd00127 14 YPAASDKELLKKLGITHVLNVAKEVPN 40 (139)
T ss_pred hhHhcCHHHHHHcCCCEEEEcccCCCC
Confidence 333445555545566889999998885
No 98
>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]
Probab=86.94 E-value=0.43 Score=46.70 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=27.4
Q ss_pred CCCCcEEEecCChhhhh-----------hcccCCCcCCCcccccC
Q 036180 235 SDPDTVVIDVRNDYETR-----------IGKFKGAVDPVTTAFRE 268 (325)
Q Consensus 235 ~~~d~vVIDVRN~yE~~-----------iGhF~GAv~pp~~~FrE 268 (325)
+..+..+||.|..-+|. -|||+||+|+|+..+-.
T Consensus 169 ~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~ 213 (286)
T KOG1529|consen 169 ATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLD 213 (286)
T ss_pred ccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhcc
Confidence 34578999999887764 48999999999987653
No 99
>PLN02727 NAD kinase
Probab=85.30 E-value=0.98 Score=50.52 Aligned_cols=164 Identities=21% Similarity=0.227 Sum_probs=89.9
Q ss_pred cCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHh---CcCCCCcccccCCCCchhhhhhcC
Q 036180 103 ADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQS---DEHLKGLRQIESPVSPEEEAIHHG 179 (325)
Q Consensus 103 ~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~s---d~rf~~l~~~~sp~s~~e~~i~~g 179 (325)
..|+...-+|..+++-|+++.+.=-=||.+.+.-+ -.|-+=++.|+. |..|.... -+|.
T Consensus 174 ~~~~~l~~~r~~~~~~ce~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~d~~~pr~~--~~p~---------- 235 (986)
T PLN02727 174 DKLPPLAIFRGEMKRCCESLHVALENYLTPDDDRS------LDVWRKLQRLKNVCYDAGFPRSD--DYPC---------- 235 (986)
T ss_pred ccCChHHHHHHHHHHHHHHHHHHHHhccCCCCCcc------hhHHHHHHHHHhhhhhcCCCCCC--CCCC----------
Confidence 45666778899999999999776666777776532 122233344443 34443211 1111
Q ss_pred CCCCCCCcCCCCCCCC-CcceEE-eecccccccCCCCCCccccCCCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccC-
Q 036180 180 HTSNSPLAAGEDAPFR-WDHVRV-KLKKEIVTLGMPTVAPIERVGKYVKPREWNALISDPDTVVIDVRNDYETRIGKFK- 256 (325)
Q Consensus 180 ~s~~sp~~a~~~~pF~-f~kLrV-KlKkEIVtlGl~~~dp~~~~gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~- 256 (325)
| .-|. |.-+.. ..+.++++.... ++ --++..++|+++.++.+.+=-.||+.|.+.|- -+...
T Consensus 236 ~-----------~~~~n~~~v~~~~~~~~~~~~~~~-~~--~~rsgQpspe~la~LA~~GfKTIINLRpd~E~-~q~~~~ 300 (986)
T PLN02727 236 H-----------TLFANWNPVYLSTSKEDIDSKESE-AA--FWRGGQVTEEGLKWLLEKGFKTIVDLRAEIVK-DNFYQA 300 (986)
T ss_pred c-----------ccccccceeeecccccccccccce-ee--EEEeCCCCHHHHHHHHHCCCeEEEECCCCCcC-CCchhH
Confidence 0 0111 211111 113344444322 11 12457999999998887776889999998882 22221
Q ss_pred -----------CCcCCCcccccC-ChhhHHhhccccccccccccccccccccccccCCCCCCCCCeEEEEcCCCcccc
Q 036180 257 -----------GAVDPVTTAFRE-FPSWVEDQFQNDKTTHKESKVEITDEITDKEVGSPEKRMPKRVAMYCTGGIRCE 322 (325)
Q Consensus 257 -----------GAv~pp~~~FrE-fp~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~k~k~IvmYCTGGIRCE 322 (325)
..+++|+..... .++-+++..+.+. . ..++||+|||..|.|+.
T Consensus 301 ee~eAae~~GL~yVhIPVs~~~apt~EqVe~fa~~l~-----------~------------slpkPVLvHCKSGarRA 355 (986)
T PLN02727 301 AVDDAISSGKIEVVKIPVEVRTAPSAEQVEKFASLVS-----------D------------SSKKPIYLHSKEGVWRT 355 (986)
T ss_pred HHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHHHHHH-----------h------------hcCCCEEEECCCCCchH
Confidence 235666643222 1244443322221 0 14689999999999874
No 100
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=81.69 E-value=0.7 Score=38.29 Aligned_cols=16 Identities=25% Similarity=0.557 Sum_probs=13.3
Q ss_pred CCCeEEEEcCCCc-ccc
Q 036180 307 MPKRVAMYCTGGI-RCE 322 (325)
Q Consensus 307 k~k~IvmYCTGGI-RCE 322 (325)
.+++|+++|+.|+ |+.
T Consensus 77 ~~~~VlVHC~~G~~RS~ 93 (138)
T smart00195 77 KGGKVLVHCQAGVSRSA 93 (138)
T ss_pred CCCeEEEECCCCCchHH
Confidence 4679999999998 764
No 101
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.97 E-value=1.4 Score=38.56 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=21.0
Q ss_pred CCCcCCHHHHHHhhCCCCcEEEecCChhh
Q 036180 221 VGKYVKPREWNALISDPDTVVIDVRNDYE 249 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~~d~vVIDVRN~yE 249 (325)
+...+++.|+.++-..+=..||--|.+.|
T Consensus 12 VsgQi~~~D~~~iaa~GFksiI~nRPDgE 40 (130)
T COG3453 12 VSGQISPADIASIAALGFKSIICNRPDGE 40 (130)
T ss_pred ecCCCCHHHHHHHHHhccceecccCCCCC
Confidence 45678888888876666566777777766
No 102
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=68.49 E-value=27 Score=29.61 Aligned_cols=54 Identities=11% Similarity=0.178 Sum_probs=43.4
Q ss_pred EEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCceeeE-eecHHHHHHHHHHH
Q 036180 98 SFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGINGSI-CGTRESVERVLGFI 153 (325)
Q Consensus 98 sFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGINgti-sG~~e~i~~~~~~l 153 (325)
..|+.-+|.+| ..|..+...+++|+|+|-+++.+ +.|--| =|...+++.|...+
T Consensus 2 ~~~~I~~L~~p-~~R~kI~~nA~ql~LtG~~~~g~-~pgiIvvEG~~k~i~~y~~lm 56 (128)
T PF06544_consen 2 YVHHIKSLSNP-KKRFKIDKNAKQLHLTGFCLPGP-KPGIIVVEGGEKSIKEYKKLM 56 (128)
T ss_pred EEEEeCcccCH-HHHHHHHHHHHHhCCeEEEEEcC-CcEEEEEECCHHHHHHHHHHH
Confidence 56788788877 67778889999999999999885 555443 57889999999883
No 103
>COG2603 Predicted ATPase [General function prediction only]
Probab=66.90 E-value=4.1 Score=40.62 Aligned_cols=37 Identities=30% Similarity=0.313 Sum_probs=29.8
Q ss_pred HHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCccc
Q 036180 228 REWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTA 265 (325)
Q Consensus 228 ~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~ 265 (325)
++..++ --.|+.+||||.+-|+.-|++++|+|.++-+
T Consensus 6 q~~~~~-~~~~~~lid~rap~ef~~g~~~ia~nl~~~n 42 (334)
T COG2603 6 QDYRAL-LLADTPLIDVRAPIEFENGAMPIAINLPLMN 42 (334)
T ss_pred HHHHHH-HhcCCceeeccchHHHhcccchhhhcccccc
Confidence 334444 3457999999999999999999999999843
No 104
>PF13117 Cag12: Cag pathogenicity island protein Cag12
Probab=63.78 E-value=47 Score=28.52 Aligned_cols=98 Identities=21% Similarity=0.220 Sum_probs=49.0
Q ss_pred hhhhhhhccCCCCCCCCCccccccccccCcCCC------CccccccchhcccceeeeeccccCCCCCCcccCCcccccCC
Q 036180 10 LALRMLSSCTSHPKPNPNPRLHFTLKPTSQNSQ------TSQLISNPIRISQAMQVSTSCFTGSTDPTTISGRPVLTNSV 83 (325)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 83 (325)
+++=||+.|||-+.|.|-..-+. +..-+++ +....-++-.+.+.|+.+.. +..-.+ +.+
T Consensus 2 ~~~~~L~gCSSpP~P~~v~~~k~---~~~iN~~l~~~~~~~~V~~s~~~~~~~W~y~~~-~~~~~~-~~~---------- 66 (113)
T PF13117_consen 2 ILALMLSGCSSPPEPPPVDWNKP---AVPINTSLPEWKPNSFVPKSDFVNGQNWTYSIV-LPNFKD-RLI---------- 66 (113)
T ss_pred chheeehhcCCCCCCCCcCCCCC---cceecccccccccCcCcCCCccccCCCceEEEE-ecCCcc-ccc----------
Confidence 45669999999888865432210 1111122 22344455445567766322 221111 111
Q ss_pred CCCCCCCCCCeEEEEEEeccCCCC------hHHHHHHHHHHHHHhCCeeEEEe
Q 036180 84 PESGDPNSSSLVVISFYKFADFPD------HANLRKPLKRLCEELRVSGGIIL 130 (325)
Q Consensus 84 ~~~~~~~~~~~~VlsFYkF~~i~d------p~~lr~~l~~~c~~l~l~GrI~I 130 (325)
.+-.++-||..+.=++ -...-...++.++..|.+|-|.+
T Consensus 67 --------~~~~~~~~yalAH~~~iIv~~~~~~~~~~~K~wL~~nGa~avIe~ 111 (113)
T PF13117_consen 67 --------DPEQIVVFYALAHSAKIIVLTGDGNLFFQYKNWLRKNGATAVIEY 111 (113)
T ss_pred --------CchhheEeeeeeccccEEEEcCCHHHHHHHHHHHHHcCCceeEEe
Confidence 1112345666654322 23444455666678888888764
No 105
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=57.34 E-value=1.2 Score=43.58 Aligned_cols=49 Identities=8% Similarity=0.190 Sum_probs=41.4
Q ss_pred HHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcccccCChhhHHhh
Q 036180 227 PREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTTAFREFPSWVEDQ 276 (325)
Q Consensus 227 P~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~~FrEfp~~v~~~ 276 (325)
|+++.+.+.+. ..++|+|..-.+.-|||+|+++.+...|..+..|+...
T Consensus 18 ~~~~~~~l~~~-~~~~d~rg~i~~a~egIngtis~~~~~~~~~~~~l~~~ 66 (314)
T PRK00142 18 PEAFRDEHLAL-CKSLGLKGRILVAEEGINGTVSGTIEQTEAYMAWLKAD 66 (314)
T ss_pred HHHHHHHHHHH-HHHcCCeeEEEEcCCCceEEEEecHHHHHHHHHHHhhC
Confidence 57777766553 67899999999999999999999998899888888753
No 106
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=55.14 E-value=15 Score=38.94 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=38.4
Q ss_pred CCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCccc
Q 036180 123 RVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQ 164 (325)
Q Consensus 123 ~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~ 164 (325)
.+-||+|||.||+|--+..+..-.+.++.||-.-|.|++++.
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~f~~k~~~~l~~~pl~~~~~~ 56 (535)
T PRK15375 15 SNDARLYIAKENTDKAYVAPEKFSSKVLTWLGKMPLFKNTEV 56 (535)
T ss_pred ccCceEEEeeCCCCeEEEchhhHHHHHHHHHhcCccccchHH
Confidence 347999999999999999999999999999999999999854
No 107
>PRK12361 hypothetical protein; Provisional
Probab=51.78 E-value=13 Score=38.46 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=20.6
Q ss_pred CCCcCCHHHHHHhhCCCCcEEEecCChhh
Q 036180 221 VGKYVKPREWNALISDPDTVVIDVRNDYE 249 (325)
Q Consensus 221 ~gk~lsP~e~~~li~~~d~vVIDVRN~yE 249 (325)
.|...++.++..+.+.+=..|||++..++
T Consensus 104 lG~~~~a~d~~~L~~~gI~~Vldlt~E~~ 132 (547)
T PRK12361 104 LGCRLFPADLEKLKSNKITAILDVTAEFD 132 (547)
T ss_pred ECCCCCcccHHHHHHcCCCEEEEcccccc
Confidence 35556677887776666689999996544
No 108
>PRK12865 YciI-like protein; Reviewed
Probab=50.57 E-value=36 Score=27.51 Aligned_cols=52 Identities=19% Similarity=0.219 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccCCce------eeE-eecHHHHHHHHHHHHhCcCCC
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPEGIN------GSI-CGTRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~EGIN------gti-sG~~e~i~~~~~~l~sd~rf~ 160 (325)
.++|..|.+..+++.-.|+|+.+---.+ |.+ -...++.+...++++.||..+
T Consensus 18 ~~~r~~H~~~l~~~~~~G~l~~~Gp~~~~~g~~~G~~~i~~a~s~e~a~~~~~~DP~~~ 76 (97)
T PRK12865 18 MDTRPTHLEYLNKLNAEGTLKIAGPFLDDDGKPCGSLVIVKAETKEAAKALADADPYAK 76 (97)
T ss_pred HHHHHHHHHHHHHHHhCCeEEEecCCcCCCCCceeEEEEEEcCCHHHHHHHHHcCCchh
Confidence 4577788888888877788775543333 323 335567777788889998765
No 109
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=48.20 E-value=11 Score=33.66 Aligned_cols=13 Identities=46% Similarity=0.884 Sum_probs=11.2
Q ss_pred CCCeEEEEcCCCc
Q 036180 307 MPKRVAMYCTGGI 319 (325)
Q Consensus 307 k~k~IvmYCTGGI 319 (325)
++++|+++|.||+
T Consensus 104 ~g~kVvVHC~~Gi 116 (180)
T COG2453 104 KGKKVVVHCQGGI 116 (180)
T ss_pred cCCeEEEEcCCCC
Confidence 4568999999997
No 110
>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase. The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.
Probab=46.40 E-value=39 Score=33.21 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=36.1
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhh---cccCCCcCCCccccc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRI---GKFKGAVDPVTTAFR 267 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~i---GhF~GAv~pp~~~Fr 267 (325)
.-+..+++.+.+.+.+++|||+|...+|+- ||++..-.|....|+
T Consensus 136 tg~gKt~Ll~~L~~~~~~VvDlr~~a~hrGs~fG~~~~~~qpsq~~fe 183 (311)
T TIGR03167 136 TGSGKTELLHALANAGAQVLDLEGLANHRGSSFGALGLGPQPSQKRFE 183 (311)
T ss_pred CCcCHHHHHHHHhcCCCeEEECCchHHhcCcccCCCCCCCCCchHHHH
Confidence 346678999999888899999999999997 999844456666664
No 111
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=45.67 E-value=19 Score=35.58 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=29.8
Q ss_pred CCcCCHHHHHHhhC------CCCcEEEecCChhhhhhcccCC
Q 036180 222 GKYVKPREWNALIS------DPDTVVIDVRNDYETRIGKFKG 257 (325)
Q Consensus 222 gk~lsP~e~~~li~------~~d~vVIDVRN~yE~~iGhF~G 257 (325)
...++++++.+++. ..+.++||||.+. +++.+|++
T Consensus 276 ~~~i~~~~~~~~l~~~~~~~~~~~~ll~vr~~~-~~~~~~~~ 316 (339)
T PRK07688 276 KEEYDLEELAELLRDRGLDVNVNPYLLSFSLEE-KRLVLFKD 316 (339)
T ss_pred cCccCHHHHHHHHHhcccccCCCcEEEEEecCC-eEEEEEcC
Confidence 35799999999883 3478999999999 99999994
No 112
>PRK12866 YciI-like protein; Reviewed
Probab=45.00 E-value=42 Score=27.47 Aligned_cols=64 Identities=17% Similarity=0.264 Sum_probs=38.3
Q ss_pred EEEEeccC--CCChHHHHHHHHHHHHHhCCeeEEEeccCCce---eeE-eecHHHHHHHHHHHHhCcCCC
Q 036180 97 ISFYKFAD--FPDHANLRKPLKRLCEELRVSGGIILAPEGIN---GSI-CGTRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 97 lsFYkF~~--i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGIN---gti-sG~~e~i~~~~~~l~sd~rf~ 160 (325)
+.+|.|.+ ++...+.|..|+++.+.+--.|.|+.|-=-.+ |.+ -...++.+...++|++||-..
T Consensus 4 ~v~~~~~~~~~~~r~~~r~~H~~~L~~~~~~G~ll~aGp~~~~~~G~~ii~~a~s~~e~~~~l~~DPf~~ 73 (97)
T PRK12866 4 LLTYDLVDDYLERREAYRAEHLALAQAATERGELLLAGALADPADGAVLVFEGDSPAAAEAFARADPYVR 73 (97)
T ss_pred EEEEEecCChHHHHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCCCcEEEEEEeCCHHHHHHHHHcCChhh
Confidence 34555543 23345677888888887766677776533222 333 334456666677888988654
No 113
>PRK12863 YciI-like protein; Reviewed
Probab=44.83 E-value=53 Score=26.23 Aligned_cols=51 Identities=24% Similarity=0.240 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHHHhCCeeEEEeccCCce-------eeE-eecHHHHHHHHHHHHhCcCCC
Q 036180 108 HANLRKPLKRLCEELRVSGGIILAPEGIN-------GSI-CGTRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 108 p~~lr~~l~~~c~~l~l~GrI~IA~EGIN-------gti-sG~~e~i~~~~~~l~sd~rf~ 160 (325)
..++|..|.+..+.+ .|.++.+-=-.+ |.+ -...++.+...+++++||..+
T Consensus 17 r~~~r~~H~~~l~~~--~g~~l~~Gp~~~~~g~~~~G~~~i~~a~~~eea~~~~~~DP~~~ 75 (94)
T PRK12863 17 RLATRPAHLAYLETL--EGRLLAAGPLLDDDGKPMVGSLVVVEAESRAAAEAFAAADPFAK 75 (94)
T ss_pred HHHHHHHHHHHHHHh--CCeEEEeCCCcCCCCCCccceEEEEEeCCHHHHHHHHHcCChhh
Confidence 356788888888888 777665432222 333 335566777778888888654
No 114
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=42.83 E-value=92 Score=25.23 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=39.2
Q ss_pred hHHHHHHHH---HHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHhCcCCCCccc
Q 036180 108 HANLRKPLK---RLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQSDEHLKGLRQ 164 (325)
Q Consensus 108 p~~lr~~l~---~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~sd~rf~~l~~ 164 (325)
+.++.+.+. +.=.++||+|-++-...-.=--|=|+.++|+..++.|..|+|=.++..
T Consensus 16 ~~~~~~Il~~s~~~N~~~~iTG~Ll~~~~~F~Q~LEG~~~~v~~l~~rI~~D~RH~~v~~ 75 (93)
T PF04940_consen 16 PEDLADILRSSRRNNRRHGITGFLLYDGGHFFQVLEGPEEAVDALFERIKQDPRHSNVVV 75 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEEEETTEEEEEEEEEHHHHHHHHHHHHT-TTEEEEEE
T ss_pred HHHHHHHHHHHHHhhhhcCCEEEEEEeCCEEEEEEECCHHHHHHHHHHHhcCCCcCCeEE
Confidence 444444443 333466899977766444444468999999999999999999887754
No 115
>PRK12864 YciI-like protein; Reviewed
Probab=38.78 E-value=79 Score=25.26 Aligned_cols=52 Identities=19% Similarity=0.066 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccCCcee---eEeecHHHHHHHHHHHHhCcCCC
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPEGING---SICGTRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~EGINg---tisG~~e~i~~~~~~l~sd~rf~ 160 (325)
.+.|..|.++.+++--.|.|+++-=..+. .+-...++.+...++++.||-.+
T Consensus 19 ~~~r~~H~~~l~~~~~~G~~~~~Gp~~~~~g~~~i~~a~s~eea~~~~~~DPy~~ 73 (89)
T PRK12864 19 APFREAHLDRLAKLKEQGILITLGPTKDLTYVFGIFEAEDEETVRQLIEADPYWQ 73 (89)
T ss_pred HHhHHHHHHHHHHHHhCCeEEEecCCCCCCCEEEEEEeCCHHHHHHHHHcCCchh
Confidence 46788888888888777888876322221 11112344556667778888765
No 116
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=35.89 E-value=11 Score=40.65 Aligned_cols=39 Identities=15% Similarity=0.173 Sum_probs=31.5
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCcc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVTT 264 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~~ 264 (325)
+.+++++...+ +...|+|.|+..|+.-+||.+.+|+|..
T Consensus 622 prmsAedl~~~---~~l~v~d~r~~~ef~r~~~s~s~nip~~ 660 (725)
T KOG1093|consen 622 PRISAEDLIWL---KMLYVLDTRQESEFQREHFSDSINIPFN 660 (725)
T ss_pred ccccHHHHHHH---HHHHHHhHHHHHHHHHhhccccccCCcc
Confidence 34455544444 5688999999999999999999999987
No 117
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=35.67 E-value=53 Score=29.12 Aligned_cols=13 Identities=31% Similarity=0.833 Sum_probs=11.3
Q ss_pred CCCeEEEEcCCCc
Q 036180 307 MPKRVAMYCTGGI 319 (325)
Q Consensus 307 k~k~IvmYCTGGI 319 (325)
.+.+|+++|..|+
T Consensus 97 ~g~~V~VHC~aGi 109 (166)
T PTZ00242 97 PPETIAVHCVAGL 109 (166)
T ss_pred CCCeEEEECCCCC
Confidence 4678999999997
No 118
>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=31.60 E-value=60 Score=35.96 Aligned_cols=53 Identities=21% Similarity=0.333 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhCCeeEEEeccCCceeeEeecHHHHHHHHHHHHh-CcCCCCc
Q 036180 110 NLRKPLKRLCEELRVSGGIILAPEGINGSICGTRESVERVLGFIQS-DEHLKGL 162 (325)
Q Consensus 110 ~lr~~l~~~c~~l~l~GrI~IA~EGINgtisG~~e~i~~~~~~l~s-d~rf~~l 162 (325)
-+|-...+++++++|+|-|+=-..|+---|.|..++++.|++.|+. .|-++-+
T Consensus 13 GFRPFVyrlA~~~~L~G~V~N~g~gVeI~v~~~~~~~e~Fi~~L~~~~PPLarI 66 (750)
T COG0068 13 GFRPFVYRLAQKLGLKGYVRNDGDGVEIVLEGDEENLEEFLNRLKKEKPPLARI 66 (750)
T ss_pred cccHHHHHHHHHcCCceEEecCCCeEEEEEecCcccHHHHHHHHhhcCCchhhh
Confidence 4678889999999999999999999999999999999999999986 5655433
No 119
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=30.04 E-value=35 Score=27.78 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=11.4
Q ss_pred CCCeEEEEcCCCc
Q 036180 307 MPKRVAMYCTGGI 319 (325)
Q Consensus 307 k~k~IvmYCTGGI 319 (325)
++++|+++|..|+
T Consensus 72 ~~~~VlVHC~~G~ 84 (133)
T PF00782_consen 72 EGGKVLVHCKAGL 84 (133)
T ss_dssp TTSEEEEEESSSS
T ss_pred ccceeEEEeCCCc
Confidence 4678999999997
No 120
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=26.57 E-value=49 Score=25.01 Aligned_cols=15 Identities=27% Similarity=0.620 Sum_probs=12.0
Q ss_pred CCeEEEEcCCCc-ccc
Q 036180 308 PKRVAMYCTGGI-RCE 322 (325)
Q Consensus 308 ~k~IvmYCTGGI-RCE 322 (325)
+.+|++.|.+|+ |+.
T Consensus 39 ~~pvlVHC~~G~gRtg 54 (105)
T smart00012 39 SGPVVVHCSAGVGRTG 54 (105)
T ss_pred CCCEEEEeCCCCChhh
Confidence 468999999998 553
No 121
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=26.57 E-value=49 Score=25.01 Aligned_cols=15 Identities=27% Similarity=0.620 Sum_probs=12.0
Q ss_pred CCeEEEEcCCCc-ccc
Q 036180 308 PKRVAMYCTGGI-RCE 322 (325)
Q Consensus 308 ~k~IvmYCTGGI-RCE 322 (325)
+.+|++.|.+|+ |+.
T Consensus 39 ~~pvlVHC~~G~gRtg 54 (105)
T smart00404 39 SGPVVVHCSAGVGRTG 54 (105)
T ss_pred CCCEEEEeCCCCChhh
Confidence 468999999998 553
No 122
>PRK11370 YciI-like protein; Reviewed
Probab=26.31 E-value=1.4e+02 Score=24.17 Aligned_cols=52 Identities=21% Similarity=0.231 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCeeEEEeccC------------CceeeEee-cHHHHHHHHHHHHhCcCCC
Q 036180 109 ANLRKPLKRLCEELRVSGGIILAPE------------GINGSICG-TRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 109 ~~lr~~l~~~c~~l~l~GrI~IA~E------------GINgtisG-~~e~i~~~~~~l~sd~rf~ 160 (325)
.++|..|++..+.+.-.|+++.+-- |+.|.+-- ..++.+...+|+++||..+
T Consensus 18 ~~~r~~H~~~l~~~~~~G~~l~~G~~~~~~~~~~g~~~~~G~~ii~ea~s~~~a~~~~~~DPy~~ 82 (99)
T PRK11370 18 LSVRPAHLARLQLLQDEGRLLTAGPMPAIDSNDPGEAGFTGSTVIAEFESLEAAQAWADADPYVA 82 (99)
T ss_pred HHHHHHHHHHHHhhhcCCEEEEeCCCccccccCCCcCCccceEEEEEECCHHHHHHHHHCCchhh
Confidence 4678888888888766677776631 13333333 4567777788888887544
No 123
>COG3309 VapD Uncharacterized virulence-associated protein D [Function unknown]
Probab=26.14 E-value=55 Score=27.54 Aligned_cols=33 Identities=30% Similarity=0.478 Sum_probs=22.6
Q ss_pred HHHHHHHHHhC---CeeEEEeccCCceeeEeecHHHH
Q 036180 113 KPLKRLCEELR---VSGGIILAPEGINGSICGTRESV 146 (325)
Q Consensus 113 ~~l~~~c~~l~---l~GrI~IA~EGINgtisG~~e~i 146 (325)
..+++..+.+| .-|.+|+..||||. +.|+....
T Consensus 26 ~Dir~~L~~~gF~~tQGSVYl~~~~i~~-~~~~~~~q 61 (96)
T COG3309 26 DDIRRVLERHGFENTQGSVYLNDEGINQ-AAGTLAAQ 61 (96)
T ss_pred HHHHHHHHHcCcccccceEEEccchHHH-HHHHHHHH
Confidence 44455556665 67999999999995 45554333
No 124
>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]
Probab=25.68 E-value=36 Score=33.92 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=31.8
Q ss_pred CCcCCHHHHHHhhCCCCcEEEecCChhhhhhcccCCCcCCCc
Q 036180 222 GKYVKPREWNALISDPDTVVIDVRNDYETRIGKFKGAVDPVT 263 (325)
Q Consensus 222 gk~lsP~e~~~li~~~d~vVIDVRN~yE~~iGhF~GAv~pp~ 263 (325)
|...+...+++.+..++++|+|.|. +-.|+++|++..+
T Consensus 3 g~~~s~~wlnr~l~~~nllllDCRs----es~~i~~A~~val 40 (343)
T KOG1717|consen 3 GISKSVAWLNRQLELGNLLLLDCRS----ESSHIESAINVAL 40 (343)
T ss_pred hHHHHHHHHHhhcccCceEEEecCC----ccchhhhhhhhcc
Confidence 4456778888999999999999999 6789999988765
No 125
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=24.04 E-value=62 Score=27.96 Aligned_cols=31 Identities=16% Similarity=0.137 Sum_probs=20.8
Q ss_pred CcCCHHHHHHhhCCCCcEEEecCChhhhhhc
Q 036180 223 KYVKPREWNALISDPDTVVIDVRNDYETRIG 253 (325)
Q Consensus 223 k~lsP~e~~~li~~~d~vVIDVRN~yE~~iG 253 (325)
..+|++++..+.+-+=..|||.|++.|....
T Consensus 28 ~~lt~~d~~~L~~lgI~tIiDLRs~~E~~~~ 58 (164)
T PF13350_consen 28 SNLTEADLERLRELGIRTIIDLRSPTERERA 58 (164)
T ss_dssp TT--HHHHHHHHHTT--EEEE-S-HHHHHHH
T ss_pred CcCCHHHHHHHHhCCCCEEEECCCccccccC
Confidence 5789999999885555899999999998764
No 126
>PF03795 YCII: YCII-related domain; InterPro: IPR005545 The majority of proteins in this group contain a single copy of this domain, though it is also found as a repeat (e.g. in Q9AJZ7 from SWISSPROT). A strongly conserved histidine and a aspartate suggest that the domain has an enzymatic function. This entry also covers what was previously known as the DGPF domain (COG3795). Although its function is unknown it is found fused to a sigma-70 factor family domain in Q9A8M4 from SWISSPROT, suggesting that this domain may plays a role in transcription initiation. This domain is named after the most conserved motif in the alignment.; PDB: 1S7I_A 1MWQ_A.
Probab=23.72 E-value=32 Score=26.74 Aligned_cols=67 Identities=21% Similarity=0.265 Sum_probs=37.6
Q ss_pred eEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEecc-----CCce--------eeEeecHHHHHHHHHHHHhCcCCC
Q 036180 94 LVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAP-----EGIN--------GSICGTRESVERVLGFIQSDEHLK 160 (325)
Q Consensus 94 ~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~-----EGIN--------gtisG~~e~i~~~~~~l~sd~rf~ 160 (325)
|.++.+|.=-..+..+++++.+.++.+++.-.|.++.+- +|=. |.+-...++.++..++++.||...
T Consensus 3 y~~~~~~~~~~~~~~~~~~~~H~~~~~~l~~~G~~~~~G~~~~~~g~~~~~~~~~gg~~i~~a~s~e~A~~~~~~dP~~~ 82 (95)
T PF03795_consen 3 YLVLIYDDPDSLEERQELRPAHLAYLKELKEAGVLVASGPFLDTDGPFAETKEFIGGFIIVEAESREEAEEIAKEDPFVK 82 (95)
T ss_dssp EEEEEEE-CCGCHHHHHCHHHHHHHHHHHHHTT-EEEECEEECCCSSSSGGCSEEEEEEEEEESSHHHHHHHHCT-HHHH
T ss_pred EEEEEEcCCCchhHHHHHHHHHHHHHHHHHHCCCEEeccCccCCCCCCcccccceeEEEEEEeCCHHHHHHHHHhCCccc
Confidence 444433332223345678888888888887766666552 3311 223234466777788888887654
No 127
>KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only]
Probab=23.57 E-value=76 Score=32.95 Aligned_cols=55 Identities=15% Similarity=0.276 Sum_probs=35.7
Q ss_pred ecccccccCCCCCCccccCCCcC-CHHHHHHhhCC---CCcEEEecCChhhhhhcccCCCcC
Q 036180 203 LKKEIVTLGMPTVAPIERVGKYV-KPREWNALISD---PDTVVIDVRNDYETRIGKFKGAVD 260 (325)
Q Consensus 203 lKkEIVtlGl~~~dp~~~~gk~l-sP~e~~~li~~---~d~vVIDVRN~yE~~iGhF~GAv~ 260 (325)
+..+||.||.|.-.- +. .+- .-+|+...|+. +...|.-.+.+.=|+.++|.|+|-
T Consensus 18 IT~rIIamsfPa~~~-es--~yRN~l~dV~~fL~s~H~~~y~vyNL~~er~yd~~~f~g~V~ 76 (434)
T KOG2283|consen 18 ITSRIIAMSFPAEGI-ES--LYRNNLEDVVLFLDSKHKDHYKVYNLSSERLYDPSRFHGRVA 76 (434)
T ss_pred eeeeEEEEeCCCCcc-hh--hhcCCHHHHHHHHhhccCCceEEEecCccccCCcccccccee
Confidence 467899999884331 11 111 12455555542 467888888877789999998754
No 128
>KOG3152 consensus TBP-binding protein, activator of basal transcription (contains rrm motif) [Transcription]
Probab=23.53 E-value=60 Score=31.94 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=24.8
Q ss_pred CeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCCc
Q 036180 93 SLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEGI 135 (325)
Q Consensus 93 ~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EGI 135 (325)
...||-|=.--+-=||..||+-| ...|..|||||++|--
T Consensus 73 k~GVvylS~IPp~m~~~rlReil----~~yGeVGRvylqpE~~ 111 (278)
T KOG3152|consen 73 KTGVVYLSNIPPYMDPVRLREIL----SQYGEVGRVYLQPEDD 111 (278)
T ss_pred cceEEEeccCCCccCHHHHHHHH----HhccccceEEecchhh
Confidence 34555443333333566666554 5889999999999953
No 129
>KOG2719 consensus Metalloprotease [General function prediction only]
Probab=23.08 E-value=82 Score=32.86 Aligned_cols=44 Identities=20% Similarity=0.342 Sum_probs=39.2
Q ss_pred EEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCC------ceeeEeec
Q 036180 98 SFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEG------INGSICGT 142 (325)
Q Consensus 98 sFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EG------INgtisG~ 142 (325)
.|+||+|+++- ++++.+++++++.|.-+++|-.-+| =||-+-|-
T Consensus 207 ~f~K~~PLe~g-~l~~~Ie~la~s~gfp~~k~~vi~~s~rs~hsNAyfyG~ 256 (428)
T KOG2719|consen 207 LFGKFTPLEEG-DLKEKIERLADSVGFPLSKYRVIDGSKRSSHSNAYFYGL 256 (428)
T ss_pred hhcCCCCCCCC-chHHHHHHHHHhcCCCceEEEEEecCCCCCCCCeeeeec
Confidence 79999999987 8999999999999999999988774 78888774
No 130
>PF14528 LAGLIDADG_3: LAGLIDADG-like domain; PDB: 2CW7_A 2CW8_A 2VS8_F 2VS7_G 1B24_A 1DQ3_A 2DCH_X.
Probab=22.74 E-value=2.8e+02 Score=20.67 Aligned_cols=44 Identities=23% Similarity=0.270 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHHHHhCCeeEEEeccCC---ceeeEeecHHHHHHHHHHH
Q 036180 108 HANLRKPLKRLCEELRVSGGIILAPEG---INGSICGTRESVERVLGFI 153 (325)
Q Consensus 108 p~~lr~~l~~~c~~l~l~GrI~IA~EG---INgtisG~~e~i~~~~~~l 153 (325)
-..+.+.++.++.++||..+|+....+ ---.|.+ +++..|++.|
T Consensus 30 s~~ll~~v~~lL~~lGi~~~i~~~~~~~~~y~l~i~~--~~~~~f~~~I 76 (77)
T PF14528_consen 30 SKELLEDVQKLLLRLGIKASIYEKKRKKGSYRLRISG--KSLKRFLEKI 76 (77)
T ss_dssp -HHHHHHHHHHHHHTT--EEEEEEECTTTEEEEEEEC--HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCeeEEEEEcCCCceEEEEECc--hHHHHHHHHh
Confidence 467888888999999999999965433 2234445 6777877654
No 131
>PF14257 DUF4349: Domain of unknown function (DUF4349)
Probab=22.18 E-value=6.1e+02 Score=23.71 Aligned_cols=60 Identities=13% Similarity=0.062 Sum_probs=45.5
Q ss_pred EEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEeccCC----------ceeeEeecHHHHHHHHHHHHhCc
Q 036180 96 VISFYKFADFPDHANLRKPLKRLCEELRVSGGIILAPEG----------INGSICGTRESVERVLGFIQSDE 157 (325)
Q Consensus 96 VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA~EG----------INgtisG~~e~i~~~~~~l~sd~ 157 (325)
+-..+==+...|++..++.+.++|+++| |.|.-..+. .+-||-.|.+.++.|++.|....
T Consensus 49 i~~~~l~lev~d~~~a~~~i~~~~~~~g--G~i~~~~~~~~~~~~~~~~~~ltiRVP~~~~~~~l~~l~~~g 118 (262)
T PF14257_consen 49 IKTADLSLEVKDVEKAVKKIENLVESYG--GYIESSSSSSSGGSDDERSASLTIRVPADKFDSFLDELSELG 118 (262)
T ss_pred EEEEEEEEEECCHHHHHHHHHHHHHHcC--CEEEEEeeecccCCCCcceEEEEEEECHHHHHHHHHHHhccC
Confidence 3344444566999999999999999986 666655553 35677779999999999998653
No 132
>cd04870 ACT_PSP_1 CT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). The ACT_PSP_1 CD includes the first of the two ACT domains found N-terminal of phosphoserine phosphatase (PSP, SerB). PSPs belong to the L-2-haloacid dehalogenase-like protein superfamily. PSP is involved in serine metabolism; serine is synthesized from phosphoglycerate through sequential reactions catalyzed by 3-phosphoglycerate dehydrogenase (SerA), 3-phosphoserine aminotransferase (SerC), and SerB. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=21.99 E-value=1.2e+02 Score=22.88 Aligned_cols=22 Identities=27% Similarity=0.173 Sum_probs=19.8
Q ss_pred ChHHHHHHHHHHHHHhCCeeEE
Q 036180 107 DHANLRKPLKRLCEELRVSGGI 128 (325)
Q Consensus 107 dp~~lr~~l~~~c~~l~l~GrI 128 (325)
+.+++++.|..+|+++++..++
T Consensus 52 ~~~~l~~~l~~l~~~l~l~i~~ 73 (75)
T cd04870 52 DSEALLKDLLFKAHELGLQVRF 73 (75)
T ss_pred CHHHHHHHHHHHHHHcCceEEE
Confidence 4789999999999999998876
No 133
>COG2350 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.44 E-value=1e+02 Score=25.48 Aligned_cols=39 Identities=8% Similarity=0.113 Sum_probs=29.4
Q ss_pred CeEEEEEEeccCCCChHHHHHHHHHHHHHhCCeeEEEec
Q 036180 93 SLVVISFYKFADFPDHANLRKPLKRLCEELRVSGGIILA 131 (325)
Q Consensus 93 ~~~VlsFYkF~~i~dp~~lr~~l~~~c~~l~l~GrI~IA 131 (325)
.|.|++++.=-+++-..++|..|++..+.+.-.|+++.|
T Consensus 2 ~~~iv~~~~~~~~e~r~~~r~~H~~~L~~~~a~G~ll~s 40 (92)
T COG2350 2 LYAIVALDYPNPLEKRLAVRPAHLARLKQLYAEGRLLTS 40 (92)
T ss_pred eEEEEEecCCCHHHHHhhhhHHHHHHHHHhhhcCeEEEe
Confidence 355666666555666677888888999999989988876
No 134
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=21.42 E-value=57 Score=31.46 Aligned_cols=12 Identities=33% Similarity=0.772 Sum_probs=10.5
Q ss_pred CCeEEEEcCCCc
Q 036180 308 PKRVAMYCTGGI 319 (325)
Q Consensus 308 ~k~IvmYCTGGI 319 (325)
+++|+|+|.+|+
T Consensus 170 g~~VaVHC~AGl 181 (241)
T PTZ00393 170 NRAVAVHCVAGL 181 (241)
T ss_pred CCeEEEECCCCC
Confidence 568999999996
Done!