BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036185
(1057 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4K1|TYW23_ARATH tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana
GN=At4g04670 PE=2 SV=1
Length = 995
Score = 1192 bits (3083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/1036 (58%), Positives = 760/1036 (73%), Gaps = 62/1036 (5%)
Query: 39 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP 98
M FE+RKAATLAS+ SS TDKSPKG LD PIIPLL IN HP+Y+TTSSCSGRISI S P
Sbjct: 1 MDFEKRKAATLASIRSSVTDKSPKGFLDEPIIPLLETINHHPSYFTTSSCSGRISILSQP 60
Query: 99 V--------NKPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRD--QLVFRFEPLI 148
K +GG+WL+ITHDPAD D V+SLLF P+ + P +LVFRFEPLI
Sbjct: 61 KPKSNDSTKKKARGGSWLYITHDPADSDLVISLLF-PSKSNQIDPIDQPSELVFRFEPLI 119
Query: 149 VAVECRDVESAEALVSIAVSSGLRESGVTSVK--KRVIVGIRCSLRLEVPLGESGNVLVS 206
+AVEC+D+ SA+ LV++A+S+G RESG+TS KRVI+ IRCS+R+EVP+G++ ++VS
Sbjct: 120 IAVECKDLGSAQFLVALAISAGFRESGITSCGDGKRVIIAIRCSIRMEVPIGDTEKLMVS 179
Query: 207 QDYVRFLVGIANQKLEANSRRIDGFLQAF--NFMVGSSVSSKDEHQNCGDLTKNVDGP-- 262
+YV+FLV IAN+K++AN +R DGF A N + DE N +L N D
Sbjct: 180 PEYVKFLVDIANEKMDANRKRTDGFSVALASNGFKNPDENDVDEDDNYENLAANHDSSIN 239
Query: 263 -----PGVPSCGLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHA 317
PGV + + ++ I GEPVEKL LWGHSAC + S + +++VFGGFGG GRHA
Sbjct: 240 NGNLYPGVQKELIPLEKLSIVGEPVEKLHLWGHSACTIDES-DRKEVIVFGGFGGFGRHA 298
Query: 318 RRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNM 377
RRN+ LL+P GT+K I SPS RLGHT+S++GD MF+IGGRADPLNIL+DVW ++
Sbjct: 299 RRNESLLLNPSCGTLKLIAVNESPSARLGHTASMVGDFMFVIGGRADPLNILNDVWRLDI 358
Query: 378 AKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLI 437
+ +W+ C GS F PRHRHAAA +G+K+Y+FGGL ND I SS+H+LDT LQWKE+
Sbjct: 359 STGEWSSQRCVGSEFPPRHRHAAASVGTKVYIFGGLYNDKIVSSMHILDTKDLQWKEVEQ 418
Query: 438 NGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFS 497
G+ PCARHSH+M+AYGS+ +MFGGYNGE L DLY+FDV +C WK E I+ + PHARFS
Sbjct: 419 QGQWPCARHSHAMVAYGSQSFMFGGYNGENVLNDLYSFDVQSCSWKLEVISGKWPHARFS 478
Query: 498 HTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDL 557
H+MF+YK+ +G+ GGCPV QN QEL+LLDL+ +W+ ++L ++ KELFVRSTA+++ DDL
Sbjct: 479 HSMFVYKHTIGIIGGCPVSQNCQELTLLDLKHRLWRSVRLEFMNKELFVRSTASILGDDL 538
Query: 558 IMIGGGAACYAFGTKFSEPVKINLSSVPLMSLDDCNIPPEMGEKLVTHHYEGVTGEKNVN 617
I+IGGGAACYAFGTKFSEPVKINL V +++ + ++PP+ E V+ E N N
Sbjct: 539 IVIGGGAACYAFGTKFSEPVKINL--VQSVTMSENHLPPQP---------EDVSLESNKN 587
Query: 618 FQALELGNTQTLTESSDFNSEAKHPVNDGHQMAASHWVVELDKKYAKFGKDILKKFGWLH 677
N TE+S + WV++L++KYAKFGKDILK FGWL
Sbjct: 588 -------NADLKTETS----------------LSQPWVIQLERKYAKFGKDILKSFGWLD 624
Query: 678 LGRKPHQQEDGKRICFPVTEKFCAIFQEKQLHSGGESEGLNTIDLSKPYTGGVLLDETSC 737
L RK + E G ICFPVTE F +F EKQL G + E +L+K G+ L + SC
Sbjct: 625 LERKVYSNEKGLCICFPVTENFSELFHEKQLL-GKDFERSEENNLTK----GLSLKDISC 679
Query: 738 ATALHFLKECGATKQMDEAVEVKRAPKSPFKAMTEAVASLIEQKGLSARLLEQLPSRWER 797
+ AL+ LKE GA K ++ A E K+ KSP + M E + S+++QKGL LL++LP +WER
Sbjct: 680 SAALNLLKEHGAKKLINVAFEAKKVAKSPLQRMREDITSILKQKGLPEELLDELPQKWER 739
Query: 798 LGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDN 857
LGDIVV+P TSFKDP W SI E+W AV+K L+ + LARQGRV P GTRDS LEILVGDN
Sbjct: 740 LGDIVVVPATSFKDPTWSSINDEVWCAVSKSLSANRLARQGRVEPNGTRDSTLEILVGDN 799
Query: 858 GWVKHCENGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRA 917
GWV H ENGILYSFDATKCMFSWGNLSEKLRM + C++EV+VDLFAGIGYFVLPFLVRA
Sbjct: 800 GWVNHRENGILYSFDATKCMFSWGNLSEKLRMGNMACENEVVVDLFAGIGYFVLPFLVRA 859
Query: 918 KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSEN 977
KA+LVYACEWNP A+EAL+ N++ANSVS+ CI+LEGDNR TAPKGVA+RV LGLIP+SE
Sbjct: 860 KAKLVYACEWNPHAIEALRRNVEANSVSERCIILEGDNRITAPKGVADRVNLGLIPSSEG 919
Query: 978 SWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVK 1037
SWVTA+QALR EGG LHVHGNVKDS+E W EHV+K++ +IAR+EG WEVT+EHIE+VK
Sbjct: 920 SWVTAIQALRPEGGILHVHGNVKDSDESSWGEHVTKTLSDIARAEGRSWEVTVEHIEKVK 979
Query: 1038 WYAPHIRHLVADVGCR 1053
WYAP IRHLVADV CR
Sbjct: 980 WYAPRIRHLVADVRCR 995
>sp|Q8H4D4|TYW23_ORYSJ tRNA wybutosine-synthesizing protein 2/3/4 OS=Oryza sativa subsp.
japonica GN=Os07g0515000 PE=2 SV=1
Length = 1043
Score = 1004 bits (2596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/1064 (48%), Positives = 719/1064 (67%), Gaps = 72/1064 (6%)
Query: 39 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP 98
M F++RKAA LA+L+S A DKSPKG +D PI PLL+A+NSHP+ +TTSSCSGR+S+ + P
Sbjct: 1 MEFDRRKAAALAALASPAPDKSPKGGVDAPIAPLLDALNSHPDLFTTSSCSGRVSVLAQP 60
Query: 99 V-------------NKPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFE 145
K +GG W++I+HDPAD ++++ +LF +LVFRFE
Sbjct: 61 PPPQQADPGGAKTKKKARGGGWVYISHDPADPEALVEVLFGVKEGGGGGDD--ELVFRFE 118
Query: 146 PLIVAVECRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLGESGNVLV 205
P+IVAVECRD +A ALV+ AV +G RESG+TS++KRV+V +RCS+R+EVPLG++ ++V
Sbjct: 119 PMIVAVECRDAAAAAALVAAAVGAGFRESGITSLQKRVMVALRCSIRMEVPLGQTKELVV 178
Query: 206 SQDYVRFLVGIANQKLEANSRRIDGFL---QAFNFMVGSSVSSKD------EHQNCGDLT 256
S DY+R+LV IAN K+EAN +R+ GFL QA + S + S+D G+
Sbjct: 179 SPDYIRYLVRIANSKMEANKKRMGGFLDLLQAKISLEASYLESQDPVLQNGAKHGFGNAK 238
Query: 257 KNV----------DGPPGV--------PSCG------LSVSRIVIAGEPVEKLFLWGHSA 292
++V P GV P+ LS + + I GEP+EKLFLWG SA
Sbjct: 239 RHVLISLSFYPAFISPHGVILTQEEALPTLSGNTTHCLSTAALEITGEPIEKLFLWGQSA 298
Query: 293 CILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI 352
C L + IL FGGFGG GRHARRN L++P G + + GSPSPR+GHT +++
Sbjct: 299 CALTVG-REHHILTFGGFGGPGRHARRNYSLLVNPGSGLLTELKVTGSPSPRMGHTITVV 357
Query: 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGG 412
G+ ++++GGR+ P IL+D+WV + ++W+ ++CSG F+PRHRHAAA + K+YVFGG
Sbjct: 358 GNDIYVVGGRSGPSEILNDIWVLERSNNRWSKVDCSGDFFRPRHRHAAAAVDRKVYVFGG 417
Query: 413 LNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDL 472
L++D + S ++++DT ++QW + + + PCARHSHS+++YGS+L++FGG++G++AL D
Sbjct: 418 LSDDGLCSCMNIMDTASIQWNVISPDDKWPCARHSHSLVSYGSKLFLFGGHDGQRALNDF 477
Query: 473 YTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIW 532
Y+FD W KE+ ++P RFSH MF+YK+YLG+ GGCP+R++ QE++LL+L+ IW
Sbjct: 478 YSFDTTTLKWNKENTNGKAPSPRFSHCMFIYKDYLGILGGCPIRESSQEIALLNLKHKIW 537
Query: 533 KHLKLNYVCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSLDDC 592
++ + + + L VRS++ ++DDDL+++GGGA+CYAFGT+FS+P+KI+L
Sbjct: 538 FYVSIPSLSQCLCVRSSSVIIDDDLVIVGGGASCYAFGTRFSQPIKIDL----------- 586
Query: 593 NIPPEMGEKLVTHHYEGVTGEKNVNFQALELGNTQTLT--ESSDFNSEAKHPVNDGHQMA 650
+ E + Y EK ++ Q + N L E + S+ V D +
Sbjct: 587 ----HLLESIFKLAY---NKEKEMSVQHGSVSNVDLLEGHEENCNPSDNVKVVIDTATLG 639
Query: 651 ASHWVVELDKKYAKFGKDILKKFGWLHLGRKPHQQEDGKRICFPVTEKFCAIFQEKQLHS 710
+S V++L+KKYAK KDILKKFGWL L RK +D + FPV++ F A+ +K L
Sbjct: 640 SSPLVLQLEKKYAKLAKDILKKFGWLDLTRKVRVSQDNIHVLFPVSKTFHALITDKHLKV 699
Query: 711 GGESEGLNTIDLSKPYTGGVLLDET-SCATALHFLKECGATKQMDEAVEVKRAPKSPFKA 769
+ + + P++ L + S AL L C + DE ++A K+P
Sbjct: 700 --QPDDSCVFEELLPFSENKLFGASISLQKALEILLLCRGSILKDEVAISRKASKTPQTI 757
Query: 770 MTEAVASLIEQKGLSARLLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKIL 829
M E V+ L+++KGL ++LLEQLP+RWE LGDI+VLP T FKDP+W+S+ +LWP VAK L
Sbjct: 758 MRELVSVLLDKKGLPSQLLEQLPTRWETLGDIIVLPKTCFKDPLWESVRDDLWPLVAKSL 817
Query: 830 NTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRM 889
LARQG++ P GTRDS LE+LVG++GW+ H ENGI YS DATKCMFS GN SEKLRM
Sbjct: 818 GAQRLARQGKITPNGTRDSTLELLVGNDGWLTHHENGICYSLDATKCMFSSGNRSEKLRM 877
Query: 890 ARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCI 949
+LDC+DEV+VDLFAGIGYFVLPFLV+A A+LVYACEWNP A+EAL+ N+ N V+D CI
Sbjct: 878 GKLDCRDEVVVDLFAGIGYFVLPFLVKANAKLVYACEWNPHALEALQRNVMDNHVADRCI 937
Query: 950 VLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAE 1009
+LEGDNR TAPKG+A+RVCLGL+P+SE SW TAV+ALR+EGG LH+HGNV DS+E LW +
Sbjct: 938 ILEGDNRLTAPKGIADRVCLGLLPSSECSWDTAVRALRAEGGMLHIHGNVNDSDESLWLD 997
Query: 1010 HVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLVADVGCR 1053
+V KSI IA++ G W VT+EH+ERVKWY PHIRHLV DV CR
Sbjct: 998 NVVKSITNIAKTHGLSWNVTVEHVERVKWYGPHIRHLVVDVKCR 1041
>sp|Q4R3U8|TYW2_MACFA tRNA wybutosine-synthesizing protein 2 homolog OS=Macaca fascicularis
GN=TRMT12 PE=2 SV=2
Length = 448
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 201/354 (56%), Gaps = 53/354 (14%)
Query: 752 QMDEAVEVKRAPK-SPFKAMTEAVASLIEQKGL--SARLLEQLPSRWERLGDIVVLPVTS 808
++ + V KRA SP + + V+ +E +G+ SA L LP W+R G++++L
Sbjct: 88 RLPDPVPSKRAQGCSPAQKLCLEVSRWVEGRGVKWSAELEADLPRSWQRHGNLLLLSEDC 147
Query: 809 FKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCENGIL 868
F+ W ++G ELW VA L LA++GRV+P GTR A+ +L+GD+GWV+H +NGIL
Sbjct: 148 FQANQWKNLGPELWETVASALGVQRLAKRGRVSPDGTRTPAVTLLLGDHGWVEHVDNGIL 207
Query: 869 YSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWN 928
Y FD T+CMFS+GN++EKLR+A L C EV+VDL+AGIGYF LPFLV A A V+ACEWN
Sbjct: 208 YKFDVTQCMFSFGNITEKLRVASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWN 267
Query: 929 PCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQALRS 988
P AV AL++NL+ N V+D C + GDNR +A+RV LGLIP+SE W A Q LR
Sbjct: 268 PHAVVALRNNLEINGVADRCQIHFGDNRKLKLSNIADRVILGLIPSSEEGWPIACQVLRQ 327
Query: 989 E-GGTLHVHGNV-------------------------------------KDSEEKL---- 1006
+ GG LH+H NV +D+ K+
Sbjct: 328 DAGGILHIHQNVESFPGKNLQPLEVSKTEKEHWLYPQQITTNQWKNGATRDTRGKMLSPA 387
Query: 1007 -------WAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGC 1052
WAE I + + G W+ I HI+ VK YAPH+ H+V D+ C
Sbjct: 388 TKPEWQRWAESAETRIATLLQQVHGKPWKTQILHIQPVKSYAPHVDHIVLDLEC 441
>sp|Q53H54|TYW2_HUMAN tRNA wybutosine-synthesizing protein 2 homolog OS=Homo sapiens
GN=TRMT12 PE=1 SV=1
Length = 448
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 200/354 (56%), Gaps = 53/354 (14%)
Query: 752 QMDEAVEVKRAPK-SPFKAMTEAVASLIEQKGL--SARLLEQLPSRWERLGDIVVLPVTS 808
Q+ + V KRA SP + + V+ +E +G+ SA L LP W+R G++++L
Sbjct: 88 QLPDPVPSKRAQGCSPAQKLCLEVSRWVEGRGVKWSAELEADLPRSWQRHGNLLLLSEDC 147
Query: 809 FKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCENGIL 868
F+ W ++G ELW VA L LA++GRV+P GTR A+ +L+GD+GWV+H +NGI
Sbjct: 148 FQAKQWKNLGPELWETVALALGVQRLAKRGRVSPDGTRTPAVTLLLGDHGWVEHVDNGIR 207
Query: 869 YSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWN 928
Y FD T+CMFS+GN++EKLR+A L C EV+VDL+AGIGYF LPFLV A A V+ACEWN
Sbjct: 208 YKFDVTQCMFSFGNITEKLRVASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWN 267
Query: 929 PCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQALRS 988
P AV AL++NL+ N V+D C + GDNR +A+RV LGLIP+SE W A Q LR
Sbjct: 268 PHAVVALRNNLEINGVADRCQIHFGDNRKLKLSNIADRVILGLIPSSEEGWPIACQVLRQ 327
Query: 989 E-GGTLHVHGNV-------------------------------------KDSEEKL---- 1006
+ GG LH+H NV +DS K+
Sbjct: 328 DAGGILHIHQNVESFPGKNLQALGVSKVEKEHWLYPQQITTNQWKNGATRDSRGKMLSPA 387
Query: 1007 -------WAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGC 1052
WAE I + + G W+ I HI+ VK YAPH+ H+V D+ C
Sbjct: 388 TKPEWQRWAESAETRIATLLQQVHGKPWKTQILHIQPVKSYAPHVDHIVLDLEC 441
>sp|Q58D65|TYW2_BOVIN tRNA wybutosine-synthesizing protein 2 homolog OS=Bos taurus
GN=TRMT12 PE=2 SV=1
Length = 438
Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 198/358 (55%), Gaps = 51/358 (14%)
Query: 747 CGATKQMDEAVEVKRAPKSPFKAMTEAVASLIEQKGL--SARLLEQLPSRWERLGDIVVL 804
C T+ +D K SP + + V+ +E +G+ SA+L LP W+R GD+++L
Sbjct: 75 CVPTQLLDPVPSKKAQSYSPAQRLCLEVSRWVEGRGVTWSAKLEADLPRSWQRHGDLLLL 134
Query: 805 PVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCE 864
F+ W + ELW VA L LA++GRV+P TR A+ +L+GD+GWV+H +
Sbjct: 135 SEDCFQAKQWRHLEPELWETVASALGAQRLAKRGRVSPDSTRTPAVSLLLGDHGWVEHVD 194
Query: 865 NGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYA 924
NGI Y FD T+CMFS+GN++EKLR+A L C EV+VDL+AGIGYF LPFLV A+A V+A
Sbjct: 195 NGIRYKFDVTQCMFSFGNITEKLRVASLPCVGEVLVDLYAGIGYFTLPFLVHAEAAFVHA 254
Query: 925 CEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQ 984
CEWNP AV AL++NL+ N V+D C + GDNR VA+RV LGLIP+SE W A +
Sbjct: 255 CEWNPHAVVALRNNLELNGVADRCQIHFGDNRKLKLSNVADRVNLGLIPSSEEGWPIACR 314
Query: 985 ALRSE-GGTLHVHGNVK------------------------------------DSEEKL- 1006
L+ + GG LH+H NV+ DS K
Sbjct: 315 VLKQDAGGILHIHQNVESFPGKTLQPPGSSEMEEHWPSPHQIISNQLNNGATSDSRRKTL 374
Query: 1007 ----------WAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGCR 1053
WA+ I + G RW+ I HI+ VK YAPH+ H+V D+ CR
Sbjct: 375 SVATKPEWQRWAKAAETRIATLLHQVHGKRWKTQILHIQPVKSYAPHVDHIVLDLECR 432
>sp|Q8BG71|TYW2_MOUSE tRNA wybutosine-synthesizing protein 2 homolog OS=Mus musculus
GN=Trmt12 PE=2 SV=1
Length = 446
Score = 254 bits (649), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 193/362 (53%), Gaps = 51/362 (14%)
Query: 747 CGATKQMDEAVEVKRAPKSPFKAMTEAVASLIEQKGL--SARLLEQLPSRWERLGDIVVL 804
C T+ D K +SP + + V +E +G+ SA L LP W+R GD+++L
Sbjct: 74 CVLTRLPDPLPSKKARVRSPAQILCLEVRRWVEDRGVTWSAELEADLPRSWQRHGDLMLL 133
Query: 805 PVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCE 864
F+ +W + ELW VA L LA++GRV P GTR ++ +L+GD+GWV+H +
Sbjct: 134 SEDCFQATLWKGLEPELWETVASALGVQRLAKRGRVLPDGTRTPSVTLLLGDHGWVEHMD 193
Query: 865 NGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYA 924
NGI Y FD T+CMFS+GN++EKLR+A L C EV+VDL+AGIGYF LPFLV A A V+A
Sbjct: 194 NGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHA 253
Query: 925 CEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQ 984
CEWNP AV AL++NL+ N V+D C + GDNR +A+RV LGLIP+S+ W A Q
Sbjct: 254 CEWNPHAVVALRNNLEINGVADRCQIHFGDNRKLKLSDIADRVNLGLIPSSKEGWPVACQ 313
Query: 985 ALRSE-GGTLHVHGNVKDSEEKL------------------------------------- 1006
LR + GG LH+H NV+ K
Sbjct: 314 VLRKDVGGILHIHQNVESFSGKTPQPPGSNNVEKEHWPRPQKITTDTQGNGTTENFRGEI 373
Query: 1007 ----------WAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGCRQI 1055
WAE I + G W I H+ VK YAPH+ H+V D+ CR +
Sbjct: 374 SSANKPEWWRWAESAETQIASLLHQVHGKPWRTRILHVHPVKSYAPHVDHIVLDLECRPL 433
Query: 1056 QT 1057
+
Sbjct: 434 TS 435
>sp|Q4V8B8|TYW2_RAT tRNA wybutosine-synthesizing protein 2 homolog OS=Rattus norvegicus
GN=Trmt12 PE=2 SV=2
Length = 437
Score = 253 bits (646), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 187/358 (52%), Gaps = 51/358 (14%)
Query: 747 CGATKQMDEAVEVKRAPKSPFKAMTEAVASLIEQKGL--SARLLEQLPSRWERLGDIVVL 804
C T+ +D K SP + + V +E +G+ S L LP W+R GD+++L
Sbjct: 74 CKLTQLLDPLPSKKARVCSPAQRLCLEVRRWVEDRGVTWSTELEADLPRSWQRHGDLMLL 133
Query: 805 PVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCE 864
F+ W + ELW VA L LA++GRV P GTR + +L+GD+GWV+H +
Sbjct: 134 SEDCFQATQWKRLEPELWETVASALGVQRLAKRGRVLPDGTRTPTVTLLLGDHGWVEHVD 193
Query: 865 NGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYA 924
NGI Y FD T+CMFS+GN++EKLR+A L C EV+VDL+AGIGYF LPFLV A A V+A
Sbjct: 194 NGIRYKFDVTQCMFSFGNITEKLRVASLSCAGEVLVDLYAGIGYFTLPFLVHAGAAFVHA 253
Query: 925 CEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQ 984
CEWNP AV AL+ NL+ N V+D C + GDNR A+RV LGLIP+SE W A Q
Sbjct: 254 CEWNPHAVVALRKNLEINGVADRCQIHFGDNRKLKLSNTADRVNLGLIPSSEEGWPIACQ 313
Query: 985 ALRSE-GGTLHVHGNVKD------------------------------------------ 1001
LR + GG LH+H NV+
Sbjct: 314 VLRKDVGGILHIHQNVESFSGKNPQPPGSSNMEKKHWPHPQKITTDKQGNRTTGSCMGEM 373
Query: 1002 -----SEEKLWAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGCR 1053
E + WAE I + G W I H+ VK YAPH+ H+V D+ CR
Sbjct: 374 SSASKPEWQRWAESAESQIASLLHQVHGKPWRTRILHVHPVKSYAPHVDHIVLDLECR 431
>sp|Q0P466|TYW2_DANRE tRNA wybutosine-synthesizing protein 2 homolog OS=Danio rerio
GN=trmt12 PE=2 SV=1
Length = 408
Score = 243 bits (619), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 187/349 (53%), Gaps = 39/349 (11%)
Query: 744 LKECGATKQMDEAVEV------KRAPKSPFKAMTEAVASLIEQKG--LSARLLEQLPSRW 795
LKE A E V++ K KS + EA S + KG S L +P RW
Sbjct: 58 LKEHVAHDSFCEIVDIQAQLSKKSKVKSVHMKLVEAARSFLLSKGKEWSEDLGRDIPGRW 117
Query: 796 ERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVG 855
+ GD+V+ F + VW IG E W AVA L +A+ +++ G R + +L+G
Sbjct: 118 QCHGDLVLFTEGCFSNAVWKEIGSEFWTAVALTLGVKRIAQIKKISQDGYRTPIVTMLLG 177
Query: 856 DNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLV 915
D+ V H +N I Y FD TKCMFS GN++EKLR+A DC E +VDL+AGIGYF LP+LV
Sbjct: 178 DSSHVTHIDNHIRYEFDVTKCMFSSGNITEKLRIASFDCSGETVVDLYAGIGYFTLPYLV 237
Query: 916 RAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTS 975
A A V+ACEWNP AV AL+ NL+ N VS+ C V +GDNR + +A+RV LGLIP+S
Sbjct: 238 HANAAHVHACEWNPDAVAALQRNLEINGVSNRCTVHQGDNRQLSLSDLADRVNLGLIPSS 297
Query: 976 ENSWVTAVQAL-RSEGGTLHVHGNV----------------------------KDSEE-K 1005
E W A + L RS GG +H+H NV KD +
Sbjct: 298 EEGWPVACRLLKRSTGGIMHIHQNVTAPFHHEPSELNSSVEGSSVEVSPLRIQKDMQVWT 357
Query: 1006 LWAEHVSKSIYEIARS-EGHRWEVTIEHIERVKWYAPHIRHLVADVGCR 1053
WA +K I + G W+ I HIE VK YAPHI H+V D+ C+
Sbjct: 358 AWASETAKRICTLLLGITGSEWKTNIRHIEHVKTYAPHISHVVLDLECK 406
>sp|Q9UTA5|TYW3_SCHPO tRNA wybutosine-synthesizing protein 3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tyw3 PE=3 SV=1
Length = 237
Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 125/226 (55%), Gaps = 9/226 (3%)
Query: 38 NMSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSH 97
++SF+ +K L L SS D SPKG D+PI PLL+ INSHP++ TTSSCSGRIS++
Sbjct: 7 DVSFDAQKKEILEGLKSSVPDASPKGHPDSPIFPLLDVINSHPDWVTTSSCSGRISVYVQ 66
Query: 98 PVNKPK-GGTWLFITHDP-ADVDSVLSLLFFPTHTTPSSPTR--DQLVFRFEPLIVAVEC 153
N K GG WLF++H ++ VL PSSP ++ + FEP+I+ V+
Sbjct: 67 GANSRKGGGYWLFVSHQAHEELPPVLEDEKVEYGKVPSSPVEGNREIQYAFEPMILHVQT 126
Query: 154 RDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLG-----ESGNVLVSQD 208
R + +A+ L +A S G RE+G+ +++ IV IR SLR+++P+G E ++++
Sbjct: 127 RSLANAQHLQRVAASCGFRETGIQGSEQKFIVAIRTSLRMDIPIGCLTASEKLQFYITRE 186
Query: 209 YVRFLVGIANQKLEANSRRIDGFLQAFNFMVGSSVSSKDEHQNCGD 254
Y+ FL + + N R+ + V + + + +N D
Sbjct: 187 YMCFLFKRSVEYFTENGNRMARLKEQLERQVEKRMKPRRKLRNMDD 232
>sp|Q641F8|TYW3_XENLA tRNA wybutosine-synthesizing protein 3 homolog OS=Xenopus laevis
GN=tyw3 PE=2 SV=1
Length = 251
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 111/184 (60%), Gaps = 14/184 (7%)
Query: 53 SSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWL 108
S+ TD S KG++D I + IN Y+TTSSCSGR+ I + ++ + + +WL
Sbjct: 14 SARKTDVSKKGSVDEDIEETVRLINQQERYFTTSSCSGRVIIINETLDNSTIQKQNCSWL 73
Query: 109 FITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVS 168
F+TH D V + L + T D +V +FEP ++ V+CR +E A+ L S+A++
Sbjct: 74 FVTHKLCKPDDVFAAL--------QNATGD-VVLKFEPFVLHVQCRALEDAQLLHSVAIN 124
Query: 169 SGLRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRR 227
+G R SG+T KK ++I+ +R + LEVPL ++G LVS +Y+ FLV AN+K+E N RR
Sbjct: 125 AGFRNSGITVGKKGKIIMAVRSTHGLEVPLTQNGKCLVSHEYIEFLVHTANKKMEENKRR 184
Query: 228 IDGF 231
I F
Sbjct: 185 ITRF 188
>sp|Q6DHJ1|TYW3_DANRE tRNA wybutosine-synthesizing protein 3 homolog OS=Danio rerio
GN=tyw3 PE=2 SV=1
Length = 251
Score = 134 bits (337), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 115/197 (58%), Gaps = 19/197 (9%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSH-- 97
SF+Q K L + D S KG++D I +++ INS Y+TTSSCSGRI +F
Sbjct: 5 SFQQWKNQCL-----NKCDFSKKGSVDEDISHVVSFINSQDRYFTTSSCSGRIILFDAVS 59
Query: 98 --PVNKPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRD 155
P + + +WLF+TH ++ V+ L + F+FEP ++ V+C+
Sbjct: 60 DCPDVQKQNCSWLFVTHQKCQMEDVVRGL---------EKSVGDATFKFEPFVLHVQCKQ 110
Query: 156 VESAEALVSIAVSSGLRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLV 214
+E A+ L ++A++SG R SG+T KK ++I+ +R + LEVPL +VLV+ Y+ FLV
Sbjct: 111 LEDAQLLHTVAINSGFRNSGITVGKKGKIIMAVRSTHCLEVPLSHRSHVLVTHQYLDFLV 170
Query: 215 GIANQKLEANSRRIDGF 231
G+ANQK+E N +RI F
Sbjct: 171 GVANQKMEENLKRIQRF 187
>sp|Q5E9U4|TYW3_BOVIN tRNA wybutosine-synthesizing protein 3 homolog OS=Bos taurus
GN=TYW3 PE=2 SV=1
Length = 258
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 106/182 (58%), Gaps = 14/182 (7%)
Query: 55 SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWLFI 110
S D S KG++D ++ ++ +N ++TTSSC+GRI + VN + + WL +
Sbjct: 16 SKADLSRKGSVDEDVLEIVQLLNGQEQFFTTSSCAGRIILLDRSVNGSEVQKQNCCWLLV 75
Query: 111 THDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSG 170
TH D V+ L + + +FEPL++ V+CR ++ A+ L S+A+ SG
Sbjct: 76 THKACVKDDVIVAL---------QKAKGDAILKFEPLVLHVQCRQLQDAQILHSVAIDSG 126
Query: 171 LRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRID 229
R SG+T K+ + ++ +R + LEVPL G ++V+++Y+ FL+ IANQK+E N +RI+
Sbjct: 127 FRNSGITVGKRGKTMLAVRSTHGLEVPLSHQGKLMVTEEYINFLLKIANQKMEENKKRIE 186
Query: 230 GF 231
F
Sbjct: 187 RF 188
>sp|Q8BSA9|TYW3_MOUSE tRNA wybutosine-synthesizing protein 3 homolog OS=Mus musculus
GN=Tyw3 PE=1 SV=1
Length = 257
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 110/191 (57%), Gaps = 17/191 (8%)
Query: 53 SSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWL 108
S S D S KG++D + ++ +NS ++TTSSC+GRI + + + WL
Sbjct: 14 SLSKADLSRKGSVDEDAVEVVELLNSREEFFTTSSCAGRILLLDGSTEGSGVQKQHCCWL 73
Query: 109 FITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVS 168
+TH P D V++ L T + V +FEP I+ V+CR ++ A+ L S+A+
Sbjct: 74 LVTHKPCARDDVMAALKGAT---------SEAVLKFEPFILHVQCRTLQDAQTLHSVAID 124
Query: 169 SGLRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRR 227
SG R SG+T K+ + ++ +R + LEVPL G ++V+++Y+ FL+ IANQK+E N RR
Sbjct: 125 SGFRNSGITVGKRGKTMLAVRGTHGLEVPLTHKGKLMVTEEYIEFLLTIANQKMEENKRR 184
Query: 228 IDGFLQAFNFM 238
I F +N++
Sbjct: 185 IGRF---YNYL 192
>sp|Q19QT9|TYW3_PIG tRNA wybutosine-synthesizing protein 3 homolog OS=Sus scrofa
GN=TYW3 PE=2 SV=1
Length = 259
Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 55 SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWLFI 110
S D S KG +D ++ ++ +N ++TTSSC+GRI + ++ + + WL +
Sbjct: 16 SKADFSRKGCVDEDVVEIVQLLNGREQFFTTSSCAGRIILLEQGMDSLEVQKQNCCWLLV 75
Query: 111 THDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSG 170
+H P D V+ L + +FEPL++ V+CR ++ A+ L S+A+ SG
Sbjct: 76 SHKPCVKDDVIVAL---------KKANGDAILKFEPLVLHVQCRQLQDAQILHSVAIDSG 126
Query: 171 LRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRID 229
R SG+T K+ + ++ +R + LEVPL G ++V+++Y+ FL+ IAN K+E N +RI+
Sbjct: 127 FRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLKIANHKMEENKKRIE 186
Query: 230 GFLQAFNFMVGSSVSSKDEH 249
F + ++ + H
Sbjct: 187 RFYNCLQLALEKETTTTNSH 206
>sp|O58523|TYW2_PYRHO tRNA wyosine derivatives biosynthesis protein Taw2 OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=taw2 PE=1 SV=1
Length = 278
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 87/273 (31%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 778 IEQKGLSARLLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQ 837
I K L L++ LP RW R+GD+++LP+ +P I E++ A++L + R+
Sbjct: 13 ILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIA-EVY---AEVLGVKTVLRK 68
Query: 838 GRVAPTGTRDSALEILVGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMARLDCKDE 897
G + TR E+L G + H ENGI Y D K MFS N+ E++RMA++ DE
Sbjct: 69 GHIHGE-TRKPDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDE 127
Query: 898 VIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRF 957
++VD+FAGIG+ LP V KA+++ A E +P + L N+ N V D DNR
Sbjct: 128 LVVDMFAGIGHLSLPIAVYGKAKVI-AIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD 186
Query: 958 TAPKGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYE 1017
+ +A+R+ +G + + ++ ++ +G +H H V EKL ++
Sbjct: 187 FPGENIADRILMGYV-VRTHEFIPKALSIAKDGAIIHYHNTVP---EKLMPREPFETFKR 242
Query: 1018 IARSEGHRWEVTIEHIERVKWYAPHIRHLVADV 1050
I + G+ E E ++K YAP + H+V D+
Sbjct: 243 ITKEYGYDVEKLNEL--KIKRYAPGVWHVVLDL 273
>sp|Q6IPR3|TYW3_HUMAN tRNA wybutosine-synthesizing protein 3 homolog OS=Homo sapiens
GN=TYW3 PE=2 SV=2
Length = 259
Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 55 SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWLFI 110
S D S KG++D ++ L+ +N ++TTSSC+GRI + +N + + WL +
Sbjct: 16 SKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGINGFEVQKQNCCWLLV 75
Query: 111 THDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSG 170
TH D V+ L +FEP ++ V+CR ++ A+ L S+A+ SG
Sbjct: 76 THKLCVKDDVIVAL---------KKANGDATLKFEPFVLHVQCRQLQDAQILHSMAIDSG 126
Query: 171 LRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRID 229
R SG+T K+ + ++ +R + LEVPL G ++V+++Y+ FL+ +ANQK+E N +RI+
Sbjct: 127 FRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEENKKRIE 186
Query: 230 GF 231
F
Sbjct: 187 RF 188
>sp|Q5R5S9|TYW3_PONAB tRNA wybutosine-synthesizing protein 3 homolog OS=Pongo abelii
GN=TYW3 PE=2 SV=1
Length = 258
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 103/182 (56%), Gaps = 14/182 (7%)
Query: 55 SATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVN----KPKGGTWLFI 110
S D S KG++D ++ L+ +N ++TTSSC+GRI + +N + + WL +
Sbjct: 16 SKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDGGINGFEVQKQNCCWLLV 75
Query: 111 THDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSG 170
TH D V+ L +FEP ++ V+CR ++ A+ L S+A+ +G
Sbjct: 76 THKLCVKDDVIVAL---------KKANGDATLKFEPFVLHVQCRQLQDAQILHSVAIDAG 126
Query: 171 LRESGVTSVKK-RVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRID 229
R SG+T K+ + ++ +R + LEVPL G ++V+++Y+ FL+ +ANQK+E N +RI+
Sbjct: 127 FRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEENKKRIE 186
Query: 230 GF 231
F
Sbjct: 187 RF 188
>sp|Q6AXB2|RABEK_XENLA Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk
PE=2 SV=1
Length = 366
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEGSP-SPRLGHTSSL-IGDHMFIIGGRADPLN 367
F G + RN + +L+P + K+ G+P SPR HTSS I D +++ GG
Sbjct: 104 FAGAEQAENRNCVQVLNPGAASWKSPKVMGTPPSPRTFHTSSAAIEDKLYVFGGGEKGAE 163
Query: 368 ILSD--VWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
++D +++++ A WT SG Q RH H +G+K++V GG+ T F + +
Sbjct: 164 PVADTNLYIYDAATMTWTQPVTSGDPPQARHGHVLTALGTKLFVHGGMAGSTFFKDMFCI 223
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
DTDT++W+ L G+ P A +HS +A+ S +Y+FGG A +Y ++ LWK+
Sbjct: 224 DTDTMKWERLKTKGDLPPACAAHSSVAWKSYIYIFGGMTSTGATNSMYRYNTETLLWKQL 283
Query: 486 DIAARSPHARFSHTMFL 502
+ P AR H+M L
Sbjct: 284 KFDSACPPARLDHSMCL 300
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 16/263 (6%)
Query: 289 GHSACILGNSINDS---QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRL 345
GH+ C+ +S DS +IL+ GG G ++ D ++D +EG PR
Sbjct: 33 GHT-CMYVSSSEDSSKGKILILGGADPSGCYS---DTHIIDLDNHEWDNPDSEGL-LPRY 87
Query: 346 GHTSSLIGDH---MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH-AAA 401
H S + + +++ G N + V V N + W + G+ PR H ++A
Sbjct: 88 EHASFISASNPGNIWVFAGAEQAEN-RNCVQVLNPGAASWKSPKVMGTPPSPRTFHTSSA 146
Query: 402 VIGSKIYVFGGLNNDT---IFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLY 458
I K+YVFGG ++L++ D T+ W + + +G+ P ARH H + A G++L+
Sbjct: 147 AIEDKLYVFGGGEKGAEPVADTNLYIYDAATMTWTQPVTSGDPPQARHGHVLTALGTKLF 206
Query: 459 MFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQN 518
+ GG G D++ D W++ P A +H+ +K+Y+ +FGG
Sbjct: 207 VHGGMAGSTFFKDMFCIDTDTMKWERLKTKGDLPPACAAHSSVAWKSYIYIFGGMTSTGA 266
Query: 519 YQELSLLDLQLHIWKHLKLNYVC 541
+ + + +WK LK + C
Sbjct: 267 TNSMYRYNTETLLWKQLKFDSAC 289
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 26/172 (15%)
Query: 422 LHVLDTDTL----QWKELLINGEGPCARHSHSMLAYGS-------RLYMFGGYNGEKALG 470
L VLD + L W L+ GEGP AR H+ + S ++ + GG +
Sbjct: 4 LEVLDPEDLPKMSTWYALVPRGEGPSARVGHTCMYVSSSEDSSKGKILILGGADPSGCYS 63
Query: 471 DLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLG---LFGGCPVRQNYQELSLLDL 527
D + D+ W D P R+ H F+ + G +F G +N + +L+
Sbjct: 64 DTHIIDLDNHEWDNPDSEGLLP--RYEHASFISASNPGNIWVFAGAEQAENRNCVQVLNP 121
Query: 528 QLHIWKHLKL--NYVCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPV 577
WK K+ F S+A ++D L + GGG K +EPV
Sbjct: 122 GAASWKSPKVMGTPPSPRTFHTSSA-AIEDKLYVFGGGE-------KGAEPV 165
>sp|P53177|TYW3_YEAST tRNA wybutosine-synthesizing protein 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TYW3 PE=1 SV=1
Length = 273
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 116/221 (52%), Gaps = 34/221 (15%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPV 99
+FEQ+K A L + S+ D SPKGT+D +P+++ IN+ + TTSSCSGR+S+F
Sbjct: 6 AFEQKKRAILNEIDSTQPDLSPKGTIDELCLPIIDLINASADMVTTSSCSGRVSVFLEGT 65
Query: 100 NKPKGGT----------WLFITHDPADV----DSVLSLLFF---------PTHTTPSSPT 136
G WL++THD V D + S F PT S
Sbjct: 66 KSYNGEVKIGGKGQGGKWLYVTHDREKVIGWLDELKSKSEFSFELSGKEIPTEKVTGSIR 125
Query: 137 RDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVP 196
+++++EP I+ V+CRD ++A L + A+S G RESG+ S +V IR +++L+VP
Sbjct: 126 --YILYKYEPFILHVKCRDFQAASKLYNTAMSCGFRESGIGS---NNLVAIRINIKLDVP 180
Query: 197 LG----ESGNV--LVSQDYVRFLVGIANQKLEANSRRIDGF 231
LG SG + V+ +YV L ++ K + N+R++
Sbjct: 181 LGYLDETSGTLKFFVTPEYVSVLDSLSLSKFDENTRKMQAL 221
>sp|Q58952|TYW2_METJA tRNA wyosine derivatives biosynthesis protein Taw2
OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM
2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=taw2 PE=1 SV=1
Length = 249
Score = 113 bits (282), Expect = 9e-24, Method: Composition-based stats.
Identities = 77/262 (29%), Positives = 133/262 (50%), Gaps = 16/262 (6%)
Query: 794 RWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEIL 853
+++++GD+V++ +D + + + A+ +L T+ + + R ++IL
Sbjct: 4 KYQKIGDVVIVKKELSEDEIREIVKRTKCKAI--LLYTTQITGEFRTP-------HVKIL 54
Query: 854 VGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPF 913
G H E G L+ D K M+S GN+ E+ RMA + ++EV+VD+FAGIGYF +P
Sbjct: 55 YGKETETIHKEYGCLFKLDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPL 114
Query: 914 LVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973
+K +LVYA E NP A L N++ N +++ I + DNR K VA+RV +G +
Sbjct: 115 AKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDVELKDVADRVIMGYVH 173
Query: 974 TSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHI 1033
+ + L+ G +H H V EK+ E + + A G++ + +
Sbjct: 174 KTHKFLDKTFEFLKDR-GVIHYHETVA---EKIMYERPIERLKFYAEKNGYK--LIDYEV 227
Query: 1034 ERVKWYAPHIRHLVADVGCRQI 1055
++K YAP + H+V D +I
Sbjct: 228 RKIKKYAPGVWHVVVDAKFERI 249
>sp|Q5EA50|RABEK_BOVIN Rab9 effector protein with kelch motifs OS=Bos taurus GN=RABEPK
PE=2 SV=1
Length = 372
Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEGSP-SPRLGHTSSL-IGDHMFIIGGRADPLN 367
FGG + RN L +L+P T G P SPR HTSS IGD +++ GG
Sbjct: 104 FGGADQSGNRNCLQVLNPDTRTWTTPEVTGPPPSPRTFHTSSAAIGDQLYVFGGGERGAQ 163
Query: 368 ILSDVW--VFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
+ DV VF+ W+ E G PRH H G+K+++ GGL D + LH +
Sbjct: 164 PVQDVQLHVFDANTLTWSQPETHGKPPSPRHGHVMVAAGTKLFIHGGLAGDNFYDDLHCI 223
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
D ++W++L G P +HS +A G LY+FGG AL +Y + + W
Sbjct: 224 DISDMKWQKLRPTGAAPTGCAAHSAVAVGKHLYVFGGMTPTGALNTMYQYHIEKQHWTLL 283
Query: 486 DIAARSPHARFSHTMFL 502
P R H+M +
Sbjct: 284 KFENSPPTGRLDHSMCI 300
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 106/248 (42%), Gaps = 17/248 (6%)
Query: 340 SPSPRLGHTSSL---IGD----HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVF 392
SP R+GH+ S +GD +FI+GG ADP SDV ++ +W L G
Sbjct: 27 SPCARVGHSCSYLPPVGDAERGKVFIVGG-ADPNRSFSDVHTIDLGTHQWDLATSEG--L 83
Query: 393 QPRHRHAA---AVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSH- 448
PR+ H + + I+VFGG + + L VL+ DT W + G P R H
Sbjct: 84 LPRYEHTSFIPSCTPHSIWVFGGADQSGNRNCLQVLNPDTRTWTTPEVTGPPPSPRTFHT 143
Query: 449 SMLAYGSRLYMFGG-YNGEKALGD--LYTFDVHACLWKKEDIAARSPHARFSHTMFLYKN 505
S A G +LY+FGG G + + D L+ FD + W + + + P R H M
Sbjct: 144 SSAAIGDQLYVFGGGERGAQPVQDVQLHVFDANTLTWSQPETHGKPPSPRHGHVMVAAGT 203
Query: 506 YLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565
L + GG Y +L +D+ W+ L+ +A V L + GG
Sbjct: 204 KLFIHGGLAGDNFYDDLHCIDISDMKWQKLRPTGAAPTGCAAHSAVAVGKHLYVFGGMTP 263
Query: 566 CYAFGTKF 573
A T +
Sbjct: 264 TGALNTMY 271
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 15/144 (10%)
Query: 432 WKELLINGEGPCAR--HSHSML-----AYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK 484
W L + G+ PCAR HS S L A ++++ GG + ++ D++T D+ W
Sbjct: 18 WYTLTLVGDSPCARVGHSCSYLPPVGDAERGKVFIVGGADPNRSFSDVHTIDLGTHQWDL 77
Query: 485 EDIAARSPHARFSHTMFL---YKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLN--Y 539
P R+ HT F+ + + +FGG N L +L+ W ++
Sbjct: 78 ATSEGLLP--RYEHTSFIPSCTPHSIWVFGGADQSGNRNCLQVLNPDTRTWTTPEVTGPP 135
Query: 540 VCKELFVRSTANVVDDDLIMIGGG 563
F S+A + D L + GGG
Sbjct: 136 PSPRTFHTSSA-AIGDQLYVFGGG 158
>sp|Q58905|Y1510_METJA UPF0130 protein MJ1510 OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=MJ1510 PE=3 SV=1
Length = 193
Score = 112 bits (279), Expect = 2e-23, Method: Composition-based stats.
Identities = 67/187 (35%), Positives = 103/187 (55%), Gaps = 15/187 (8%)
Query: 39 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP 98
M F + K TL +L + + G +D IIP+LN IN NYYTTSSC GR+ I P
Sbjct: 1 MGFLEDKKRTLMNLELAIRE----GLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIP 56
Query: 99 VNK-PK-GGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDV 156
+K PK WL H A D + + L + +VF I+ + C+D+
Sbjct: 57 KDKNPKLYSRWLGKWHHYASYDELFNAL--------KNKKEGYIVFVMNSPILHIACKDI 108
Query: 157 ESAEALVSIAVSSGLRESGVTSVK-KRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVG 215
ESA+ ++ +A+ SGL+ S + S+ KRVIV I + +++ P+GE G + V +Y++FL+
Sbjct: 109 ESAKKMLELAIHSGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDNNYLKFLLD 168
Query: 216 IANQKLE 222
+N KL+
Sbjct: 169 YSNSKLK 175
>sp|Q8U1V7|Y1098_PYRFU UPF0130 protein PF1098 OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=PF1098 PE=3 SV=1
Length = 196
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP- 98
+FE+ K L SL + KG +D IIPLL INS NY+TTSSCSGRIS+ P
Sbjct: 6 NFERAKKEALISLEIALR----KGEVDEDIIPLLKKINSLDNYFTTSSCSGRISVMEMPH 61
Query: 99 VNKPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVES 158
WL H +D VL + H + QL F I+ V + +E
Sbjct: 62 FGDKVNAKWLGKWHREVSLDEVLGAI--KKHRSG------QLWFLVRSPILHVGAKTLED 113
Query: 159 AEALVSIAVSSGLRESGVTSV-KKRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIA 217
A LV++AVS G + S + S+ K++IV IR + R++V LGE+G +LV ++Y+R +V IA
Sbjct: 114 AIRLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGENGRILVGEEYLRKIVEIA 173
Query: 218 N---QKLEANSRRIDGFLQAFN 236
N ++ + +R++ + A N
Sbjct: 174 NAQVRRFKEKLKRLESNIDALN 195
>sp|Q9V074|Y917_PYRAB UPF0130 protein PYRAB09170 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB09170 PE=3 SV=1
Length = 194
Score = 108 bits (270), Expect = 2e-22, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 99/194 (51%), Gaps = 14/194 (7%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPV 99
+FE+ K L SL + +G +D IIPLL IN PNY+TTSSCSGRISI P
Sbjct: 6 NFERAKKEALISLEIALR----RGEVDEDIIPLLKKINEKPNYFTTSSCSGRISIMEMPD 61
Query: 100 NKPK-GGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVES 158
K WL H +D VL + QL I+ V R +E
Sbjct: 62 FGDKVNAKWLGKWHREVSLDEVLEAI--------RKHREGQLWLLVRSPILHVGARTLED 113
Query: 159 AEALVSIAVSSGLRESGVTSVKKR-VIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIA 217
L+++ VS G + S + S+ R +IV IR + RL+ LGE+G +LVS DY+R LV IA
Sbjct: 114 GIKLLNLGVSCGFKYSNIKSISDRKLIVEIRSTERLDALLGENGEILVSDDYMRKLVEIA 173
Query: 218 NQKLEANSRRIDGF 231
N ++ R++ F
Sbjct: 174 NAQVRRFKRKLKRF 187
>sp|P50090|KEL2_YEAST Kelch repeat-containing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KEL2 PE=1 SV=1
Length = 882
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 32/319 (10%)
Query: 273 SRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLL----DPL 328
+R+ + P + + HS+ + ND++I V GG + D++ + D
Sbjct: 74 NRVKLKNSPFPR---YRHSSSFI--VTNDNRIFVTGGLHDQSVYG---DVWQIAANADGT 125
Query: 329 QGTIKAIH-TEGSPSPRLGHTSSLIGDHMFIIGGRADPLN----ILSDVWVFNMAKSKWT 383
T K I + +P PR+GH S++ G+ + GG LN + D+++FN+ KWT
Sbjct: 126 SFTSKRIDIDQNTPPPRVGHASTICGNAYVVFGGDTHKLNKNGLLDDDLYLFNINSYKWT 185
Query: 384 LLECSGSVFQPRHRHAAAVIGS-----KIYVFGGLNNDTIFSSLHVLDTDTLQ-----WK 433
+ + G R+ H ++I S K+Y+FGG ++T F+ L V D + + W+
Sbjct: 186 IPQPIGRRPLGRYGHKISIIASNPMQTKLYLFGGQVDETYFNDLVVFDLSSFRRPNSHWE 245
Query: 434 ELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPH 493
L G+ P +H+M+AY ++L++FGG + D Y +D W K P
Sbjct: 246 FLEPVGDLPPPLTNHTMVAYDNKLWVFGGETPKTISNDTYRYDPAQSEWSKVKTTGEKPP 305
Query: 494 ARFSHTMFLYKNYLGLFGGCPVRQNYQE----LSLLDLQLHIWKHLKLNYVCKELFVRST 549
H +YK+ + + GG Y L+LL L+ + +K + +E S
Sbjct: 306 PIQEHASVVYKHLMCVLGGKDTHNAYSNDVYFLNLLSLKWYKLPRMKEG-IPQERSGHSL 364
Query: 550 ANVVDDDLIMIGGGAACYA 568
+ ++ L+++GG YA
Sbjct: 365 TLMKNEKLLIMGGDKTDYA 383
>sp|Q5ZJ37|RABEK_CHICK Rab9 effector protein with kelch motifs OS=Gallus gallus GN=RABEPK
PE=2 SV=1
Length = 371
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPS-PRLGHTSSL-IGDHMFIIGGRADPLN 367
FGG R R+ + +LDP GT ++ G P PR HTSS IGD +++ GG
Sbjct: 102 FGGAHRAGNRSCVQVLDPEIGTWESPEVTGIPPLPRTFHTSSAAIGDCLYVFGGGDKGAE 161
Query: 368 ILSD--VWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
+ D + VF+ WT + G PRH H +G+K+++ GGL D ++ L +
Sbjct: 162 PVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHVVVAVGTKLFIHGGLAGDIFYNDLFCI 221
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
DT ++W ++ G+ P R SHS + LY+FGG + L Y + + W
Sbjct: 222 DTTDMKWVKIAATGDVPGGRASHSSAVFKDHLYIFGGIGPDGTLDTTYKYHIEEQQWTLL 281
Query: 486 DIAARSPHARFSHTM 500
+ P R H M
Sbjct: 282 QFDSPLPAGRLDHAM 296
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 343 PRLGHTSSLIG---DHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH- 398
PR H + L +++ GG N S V V + W E +G PR H
Sbjct: 83 PRYEHATFLSACRPPRLWVFGGAHRAGN-RSCVQVLDPEIGTWESPEVTGIPPLPRTFHT 141
Query: 399 AAAVIGSKIYVFGGLNNDT---IFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
++A IG +YVFGG + LHV DT L W + +G+ P RH H ++A G+
Sbjct: 142 SSAAIGDCLYVFGGGDKGAEPVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHVVVAVGT 201
Query: 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGG 512
+L++ GG G+ DL+ D W K P R SH+ ++K++L +FGG
Sbjct: 202 KLFIHGGLAGDIFYNDLFCIDTTDMKWVKIAATGDVPGGRASHSSAVFKDHLYIFGG 258
Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 11/231 (4%)
Query: 341 PSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398
P R+GH + G ++ G ADP +D + W SG +PR+ H
Sbjct: 30 PRGRVGHGCLFVPGGSGRVLLLGGADPAGAFADAHFVELGAHLWAPAAWSG--LRPRYEH 87
Query: 399 A---AAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSH-SMLAYG 454
A +A +++VFGG + S + VLD + W+ + G P R H S A G
Sbjct: 88 ATFLSACRPPRLWVFGGAHRAGNRSCVQVLDPEIGTWESPEVTGIPPLPRTFHTSSAAIG 147
Query: 455 SRLYMFGGYN-GEKALGD--LYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFG 511
LY+FGG + G + + D L+ FD A W + D P R H + L + G
Sbjct: 148 DCLYVFGGGDKGAEPVKDQQLHVFDTVALAWTQPDTHGDPPSPRHGHVVVAVGTKLFIHG 207
Query: 512 GCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
G Y +L +D W + ++ V D L + GG
Sbjct: 208 GLAGDIFYNDLFCIDTTDMKWVKIAATGDVPGGRASHSSAVFKDHLYIFGG 258
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 311 GGMGRHARRNDLFLLDPLQGT-IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNIL 369
GG+ NDLF +D +K T P R H+S++ DH++I GG P L
Sbjct: 207 GGLAGDIFYNDLFCIDTTDMKWVKIAATGDVPGGRASHSSAVFKDHLYIFGGIG-PDGTL 265
Query: 370 SDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDT 417
+ +++ + +WTLL+ + R HA VI ++ G N D
Sbjct: 266 DTTYKYHIEEQQWTLLQFDSPLPAGRLDHAMCVIPWRV----GKNGDA 309
>sp|Q7Z6M1|RABEK_HUMAN Rab9 effector protein with kelch motifs OS=Homo sapiens GN=RABEPK
PE=1 SV=1
Length = 372
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIH-TEGSPSPRLGHTSSL-IGDHMFIIGGRADPLN 367
FGG + RN L +L+P T T PSPR HTSS IG+ +++ GG
Sbjct: 104 FGGANQSGNRNCLQVLNPETRTWTTPEVTSPPPSPRTFHTSSAAIGNQLYVFGGGERGAQ 163
Query: 368 ILSD--VWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
+ D + VF+ W+ E G+ PRH H G+K+++ GGL D + LH +
Sbjct: 164 PVQDTKLHVFDANTLTWSQPETLGNPPSPRHGHVMVAAGTKLFIHGGLAGDRFYDDLHCI 223
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
D ++W++L G P +HS +A G +Y+FGG AL +Y + W
Sbjct: 224 DISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTPAGALDTMYQYHTEEQHWTLL 283
Query: 486 DIAARSPHARFSHTMFL 502
P R H+M +
Sbjct: 284 KFDTLLPPGRLDHSMCI 300
Score = 93.2 bits (230), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 17/248 (6%)
Query: 340 SPSPRLGHTSSL---IGD----HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVF 392
SP R+GH+ S +G+ +FI+GG A+P SDV ++ K +W L C G
Sbjct: 27 SPCARVGHSCSYLPPVGNAKRGKVFIVGG-ANPNRSFSDVHTMDLGKHQWDLDTCKG--L 83
Query: 393 QPRHRHAA---AVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSH- 448
PR+ HA+ + +I+VFGG N + L VL+ +T W + P R H
Sbjct: 84 LPRYEHASFIPSCTPDRIWVFGGANQSGNRNCLQVLNPETRTWTTPEVTSPPPSPRTFHT 143
Query: 449 SMLAYGSRLYMFGG-YNGEKALGD--LYTFDVHACLWKKEDIAARSPHARFSHTMFLYKN 505
S A G++LY+FGG G + + D L+ FD + W + + P R H M
Sbjct: 144 SSAAIGNQLYVFGGGERGAQPVQDTKLHVFDANTLTWSQPETLGNPPSPRHGHVMVAAGT 203
Query: 506 YLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565
L + GG + Y +L +D+ W+ L +A + + + GG
Sbjct: 204 KLFIHGGLAGDRFYDDLHCIDISDMKWQKLNPTGAAPAGCAAHSAVAMGKHVYIFGGMTP 263
Query: 566 CYAFGTKF 573
A T +
Sbjct: 264 AGALDTMY 271
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 432 WKELLINGEGPCAR--HSHSML-----AYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK 484
W L + G+ PCAR HS S L A ++++ GG N ++ D++T D+ W
Sbjct: 18 WYTLTVPGDSPCARVGHSCSYLPPVGNAKRGKVFIVGGANPNRSFSDVHTMDLGKHQWDL 77
Query: 485 EDIAARSPHARFSHTMFL---YKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNY-- 539
+ P R+ H F+ + + +FGG N L +L+ + W ++
Sbjct: 78 DTCKGLLP--RYEHASFIPSCTPDRIWVFGGANQSGNRNCLQVLNPETRTWTTPEVTSPP 135
Query: 540 VCKELFVRSTANVVDDDLIMIGGG 563
F S+A + + L + GGG
Sbjct: 136 PSPRTFHTSSA-AIGNQLYVFGGG 158
>sp|Q09832|TYW2_SCHPO tRNA wybutosine-synthesizing protein 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=trm12 PE=3 SV=1
Length = 418
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 168/395 (42%), Gaps = 82/395 (20%)
Query: 727 TGGVLLDETSCATALHFLKEC----GATKQMDEAVEVKRAPKSPFKAMTEAVASLIEQKG 782
+G L+D S FLK+C + + D ++ P+ + E V S+ +
Sbjct: 32 SGPKLVDTYSNQFEADFLKKCVLIPTSYNKEDLPKDILDCPR--IYLIEEEVKSVQTDEK 89
Query: 783 LSARLL-------------EQ--LPSRWERLGDIVVLPVTSFKDPVWD---------SIG 818
L ++L EQ +PSR+ + +L + SF W +
Sbjct: 90 LQIKVLRYVSQILHTTVSEEQYPVPSRFVIYPPLALLSLNSFGTKEWHLFFQSYANVDVK 149
Query: 819 GELWPAVAKILNTSHLARQGRVAPTGT---RDSALEILVGDNG----------------W 859
L+ A+ N SH+A + P G R +L+ L GD G W
Sbjct: 150 AGLFDIFAREWNVSHIAINEPI-PVGDVMRRPLSLKPLYGDFGVLIDGNPSEQDFQKAFW 208
Query: 860 VKHCENGILYSFDATKCMFSWGNLSEKLRMARLD-CKDEVIVDLFAGIGYFVLPFLVRAK 918
V +NGI ++ MFS GN EK R+ KDE+I DL+AGIGYF + V+A
Sbjct: 209 VSCRQNGIYQTWAPLYTMFSRGNSIEKARVLNFSYIKDEIIADLYAGIGYFTFSY-VKAG 267
Query: 919 ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDN----------------------R 956
A V+ E NP +VEAL+ N S + +V G+N R
Sbjct: 268 ASTVFCWEINPWSVEALRRAALKNGWSIY-VVRNGENYEFKVGTHRIVVFLESNVYAAER 326
Query: 957 FTAPKGVANRVCLGLIPTSENSWVTAVQALRSEGGT-LHVHGNVKDSEEKLWAEHVSKSI 1015
F+ A + LG++P+SE SW TA L+ E + +HVH NVKD + + ++ V+
Sbjct: 327 FSKMNISARHINLGMLPSSEKSWSTATSILKRESHSFIHVHENVKDEDIETYSSEVNSCF 386
Query: 1016 YEIARSEGHRWEVTIEHIERVKWYAPHIRHLVADV 1050
++ T+ VK ++P + H+V D+
Sbjct: 387 SKMLAKN------TVCVTNCVKSFSPRVSHIVYDI 415
>sp|Q58CV6|KLDC3_BOVIN Kelch domain-containing protein 3 OS=Bos taurus GN=KLHDC3 PE=2 SV=2
Length = 382
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Query: 341 PSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 400
P R GH++ LI D +F+ GGR D + ++ F++ KW+ SG+V R H+A
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 401 AVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLY 458
V+G +Y+FGG D + +H LDT T+ W + G R HS GS +Y
Sbjct: 134 CVLGKTMYIFGGYEQLADCFSNDIHKLDTSTMTWTLICTKGNPARWRDFHSATMLGSHMY 193
Query: 459 MFGGY---------NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGL 509
+FGG N E + FD W P R SH+ F Y L +
Sbjct: 194 VFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAFGYNGELYI 253
Query: 510 FGGCPVRQN--YQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
FGG R N + +L + WK ++ R +V D +++ GG
Sbjct: 254 FGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGG 308
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP-RLGH 347
GHSAC+LG + + +FGG+ + ND+ LD T I T+G+P+ R H
Sbjct: 130 GHSACVLGKT-----MYIFGGYEQLA-DCFSNDIHKLDTSTMTWTLICTKGNPARWRDFH 183
Query: 348 TSSLIGDHMFIIGGRAD---PLNILSDVW-----VFNMAKSKWTLLECSGSVFQP--RHR 397
+++++G HM++ GGRAD P + ++++ VF+ W L+C + P R
Sbjct: 184 SATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAW--LDCPPTPVLPEGRRS 241
Query: 398 HAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
H+A ++Y+FGG N + F L + + WK++ G+GPC R G
Sbjct: 242 HSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGD 301
Query: 456 RLYMFGGY--NGEKALGDLYTFDVHACL 481
++ +FGG + E+ LGD + H+ L
Sbjct: 302 KIVLFGGTSPSPEEGLGDEFDLIDHSDL 329
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 395 RHRHAAAVIGSKIYVFGGLNNDTIFSSL-----HVLDTDTLQWKEL-----LINGEGPCA 444
R HAA +G ++Y FGG + + +L H+ + +L+W +L G+ P
Sbjct: 14 RVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVRPAARGQAPVV 73
Query: 445 ---RHSHSMLAYGSRLYMFGGYNG-EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM 500
R+ HS + ++++GG N E A LY FDV+ W ++ P AR H+
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 501 FLYKNYLGLFGG 512
+ + +FGG
Sbjct: 134 CVLGKTMYIFGG 145
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 63/151 (41%), Gaps = 25/151 (16%)
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVH-----ACLWKK 484
L+W L EG R +H+ +A G R+Y FGGY + L DVH + W K
Sbjct: 2 LRWTVHL---EGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTK 58
Query: 485 ---EDIAARS-----PHARFSHTMFLYKNYLGLFGGCPVRQNYQE-----LSLLDLQLHI 531
AAR P+ R+ H+ L + + L+GG +N E L D+ H
Sbjct: 59 LPPVRPAARGQAPVVPYMRYGHSTVLIDDTVFLWGG----RNDTEGACNVLYAFDVNTHK 114
Query: 532 WKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
W +++ +A V+ + + GG
Sbjct: 115 WSTPRVSGTVPGARDGHSACVLGKTMYIFGG 145
>sp|O58796|Y1069_PYRHO UPF0130 protein PH1069 OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH1069
PE=1 SV=2
Length = 196
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 17/202 (8%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPV 99
+FE+ K L SL + KG +D IIPLL INS NY+TTSSCSGRIS+ P
Sbjct: 6 NFERAKKEALMSLEIALR----KGEVDEDIIPLLKKINSIENYFTTSSCSGRISVMEMPH 61
Query: 100 NKPK-GGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVES 158
K WL H + VL + H + QL F I+ V + +E
Sbjct: 62 FGDKVNAKWLGKWHREVSLYEVLEAI--KKHRS------GQLWFLVRSPILHVGAKTLED 113
Query: 159 AEALVSIAVSSGLRESGVTSV-KKRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIA 217
A LV++AVS G + S + S+ K++IV IR + R++V LGE+G + V ++Y+ +V IA
Sbjct: 114 AVKLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVLLGENGEIFVGEEYLNKIVEIA 173
Query: 218 N---QKLEANSRRIDGFLQAFN 236
N ++ + +R++ + A N
Sbjct: 174 NDQMRRFKEKLKRLESKINALN 195
>sp|C6A5A3|Y1747_THESM UPF0130 protein TSIB_1747 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=TSIB_1747 PE=3 SV=1
Length = 197
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHP- 98
+F+ +K L SL+ D KG +D+ II LLN INS NY+TTSSCSGRISI P
Sbjct: 7 NFDLQKKKALESLN----DALEKGLVDSDIISLLNKINSLKNYFTTSSCSGRISIMQMPD 62
Query: 99 VNKPKGGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVES 158
+ WL H ++ VL T + L F I+ V + +E
Sbjct: 63 LGDKLNAIWLGKWHREVKIEEVLD--------TINKHDGGMLWFMVHSPILHVSAKTLED 114
Query: 159 AEALVSIAVSSGLRESGVTSVK-KRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIA 217
A L+++A++ G + S + SV K+++V IR + R+++PLG G + V++ Y+ +V +A
Sbjct: 115 AVELLNLAMACGFKHSNIKSVSHKKLVVEIRSTERMDIPLGSDGELWVNESYLVKIVSMA 174
Query: 218 NQKLEANSRRI 228
N +L ++
Sbjct: 175 NLQLRRTKEKL 185
>sp|P87061|TEA1_SCHPO Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1
Length = 1147
Score = 100 bits (249), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 26/256 (10%)
Query: 277 IAGEPVEKLFLWGHSACILGNSINDSQILVFGG-----FGGMGRHAR-RNDLFLLDPLQG 330
I P KL + G S+ +L + S + GG FGG+ ++ +NDL++L+
Sbjct: 61 ITASPWSKLTVRG-SSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATS 119
Query: 331 TIKAIHTEG-SPSPRLGHTSSLIGDHMFIIGG--------RADPLNILSDVWVFNMAKSK 381
++ + G +PSPRLGH S LIG+ + GG R D + +++ N +
Sbjct: 120 QFTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQD-----NSLYLLNTSSLV 174
Query: 382 WTLLECSGSVFQPRHRHAAAVIGSKIYVFGG-----LNNDTIFSSLHVLDTDTLQWKELL 436
W SG+ R+ H + +GSKI +FGG ND + L+ L+T +W+
Sbjct: 175 WQKANASGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLNTSDSRWELAS 234
Query: 437 INGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARF 496
+ + P AR H + +LY+FGG +G DL+ + W K + +P+ R
Sbjct: 235 VVNDPPPARAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFGVAPNPRA 294
Query: 497 SHTMFLYKNYLGLFGG 512
H + + L +FGG
Sbjct: 295 GHAASVVEGILYVFGG 310
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 100/232 (43%), Gaps = 14/232 (6%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARR-NDLFLLDPLQGTIKAIHTEGS-PSPRLG 346
GH++ ++GN+ +VFGG R+ N L+LL+ + + G+ PS R G
Sbjct: 136 GHASILIGNAF-----IVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYG 190
Query: 347 HTSSLIGDHMFIIGGRA-----DPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAA 401
HT S +G + + GGR + L + D+ N + S+W L R H A
Sbjct: 191 HTISCLGSKICLFGGRLLDYYFNDL-VCFDLNNLNTSDSRWELASVVNDPPPARAGHVAF 249
Query: 402 VIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFG 461
K+Y+FGG + F+ L W ++ G P R H+ LY+FG
Sbjct: 250 TFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHAASVVEGILYVFG 309
Query: 462 GYNGEKA-LGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGG 512
G + L DLY F + + W K +P R SHT+ L L GG
Sbjct: 310 GRASDGTFLNDLYAFRLSSKHWYKLSDLPFTPSPRSSHTLSCSGLTLVLIGG 361
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 27/203 (13%)
Query: 288 WGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGS------- 340
+GH+ LG S+I +FGG R D + D + + ++T S
Sbjct: 189 YGHTISCLG-----SKICLFGG--------RLLDYYFNDLVCFDLNNLNTSDSRWELASV 235
Query: 341 ----PSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRH 396
P R GH + D ++I GG D N +D+W ++ +S W+ +E G PR
Sbjct: 236 VNDPPPARAGHVAFTFSDKLYIFGG-TDGANFFNDLWCYHPKQSAWSKVETFGVAPNPRA 294
Query: 397 RHAAAVIGSKIYVFGGLNND-TIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
HAA+V+ +YVFGG +D T + L+ + W +L P R SH++ G
Sbjct: 295 GHAASVVEGILYVFGGRASDGTFLNDLYAFRLSSKHWYKLSDLPFTPSPRSSHTLSCSGL 354
Query: 456 RLYMFGGYNGEKAL-GDLYTFDV 477
L + GG G+ A ++Y D
Sbjct: 355 TLVLIGGKQGKGASDSNVYMLDT 377
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 377 MAKSKWTLLECSGSV-FQPRHRHAAAVI---GSKIYVFGGLNNDTI-FSSLHVLDTDTLQ 431
+ S W+ L GS PR+ HA+ + G +IY+FGG+ +D+ + L VL+ T Q
Sbjct: 61 ITASPWSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGGVASDSQPKNDLWVLNLATSQ 120
Query: 432 WKELLINGEGPCARHSHSMLAYGSRLYMFGGYN----GEKALGDLYTFDVHACLWKKEDI 487
+ L GE P R H+ + G+ +FGG ++ LY + + +W+K +
Sbjct: 121 FTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANA 180
Query: 488 AARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDL 527
+ P R+ HT+ + + LFGG + + +L DL
Sbjct: 181 SGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDL 220
>sp|Q4V8F4|RABEK_RAT Rab9 effector protein with kelch motifs OS=Rattus norvegicus
GN=Rabepk PE=2 SV=1
Length = 372
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 90/195 (46%), Gaps = 4/195 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEG-SPSPRLGHTSSL-IGDHMFIIGGRADPLN 367
FGG + RN L +++P T G PSPR HTSS IG+H+++ GG
Sbjct: 104 FGGADQSGNRNCLQVMNPEARTWSTPEVTGCPPSPRTFHTSSAAIGNHLYVFGGGERGAQ 163
Query: 368 ILSDV--WVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
+ DV VF+ W E GS PRH HA G+K+++ GGL D F LH +
Sbjct: 164 PVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTKLFIHGGLAGDRFFDDLHCI 223
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
D + W++L G P +H+ +A G +Y+FGG AL +Y + W
Sbjct: 224 DIGDMSWQKLGPTGTAPVGCAAHAAVAVGHHVYVFGGMTATGALNTMYKYHTEKQHWTIL 283
Query: 486 DIAARSPHARFSHTM 500
P R H+M
Sbjct: 284 QFDTSLPPGRLDHSM 298
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 343 PRLGHTSSL--IGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH-A 399
PR H S L H + G AD + + V N W+ E +G PR H +
Sbjct: 85 PRYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMNPEARTWSTPEVTGCPPSPRTFHTS 144
Query: 400 AAVIGSKIYVFGGLN---NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSR 456
+A IG+ +YVFGG LHV D +TL W + +G P RH H+M+A G++
Sbjct: 145 SAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTK 204
Query: 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSP 492
L++ GG G++ DL+ D+ W+K +P
Sbjct: 205 LFIHGGLAGDRFFDDLHCIDIGDMSWQKLGPTGTAP 240
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 341 PSPRLGHTSSL---IGD----HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQ 393
P PR+GH+ S +G+ +FI+GG A+P SDV ++ +W G
Sbjct: 28 PCPRVGHSCSYFPPVGEAEKGKVFIVGG-ANPNQSFSDVHTMDLGTHRWDTATREG--LL 84
Query: 394 PRHRHAA---AVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSH-S 449
PR+ HA+ + I+VFGG + + L V++ + W + G P R H S
Sbjct: 85 PRYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMNPEARTWSTPEVTGCPPSPRTFHTS 144
Query: 450 MLAYGSRLYMFGG-YNGEKALGD--LYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNY 506
A G+ LY+FGG G + + D L+ FD + W + + P R H M
Sbjct: 145 SAAIGNHLYVFGGGERGAQPVQDVKLHVFDANTLTWAQPETHGSPPSPRHGHAMVAAGTK 204
Query: 507 LGLFGGCPVRQNYQELSLLDLQLHIWKHL 535
L + GG + + +L +D+ W+ L
Sbjct: 205 LFIHGGLAGDRFFDDLHCIDIGDMSWQKL 233
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 13/174 (7%)
Query: 379 KSKWTLLECSGSVFQPRHRHAAAVI-------GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431
K+ W L C G PR H+ + K+++ GG N + FS +H +D T +
Sbjct: 15 KAAWYTLTCPGDKPCPRVGHSCSYFPPVGEAEKGKVFIVGGANPNQSFSDVHTMDLGTHR 74
Query: 432 WKELLINGEGPCARHSHSMLAYGSR-LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAAR 490
W G P H+ + + +++FGG + L + A W ++
Sbjct: 75 WDTATREGLLPRYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMNPEARTWSTPEVTGC 134
Query: 491 SPHARFSHT-MFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKE 543
P R HT N+L +FGG + Q + D++LH++ L + E
Sbjct: 135 PPSPRTFHTSSAAIGNHLYVFGG--GERGAQPVQ--DVKLHVFDANTLTWAQPE 184
>sp|Q6AYI2|KLDC3_RAT Kelch domain-containing protein 3 OS=Rattus norvegicus GN=Klhdc3
PE=2 SV=1
Length = 382
Score = 100 bits (248), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Query: 341 PSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 400
P R GH++ LI D +F+ GGR D + ++ F++ KW+ SG+V R H+A
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 401 AVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLY 458
V+G +Y+FGG D + +H LDT T+ W + G R HS G+ +Y
Sbjct: 134 CVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFHSATMLGNHMY 193
Query: 459 MFGGY---------NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGL 509
+FGG N E + FD W P R SH+ F Y L +
Sbjct: 194 VFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPVLPEGRRSHSAFGYNGELYI 253
Query: 510 FGGCPVRQN--YQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
FGG R N + +L + WK ++ R +V D +++ GG
Sbjct: 254 FGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGG 308
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP-RLGH 347
GHSAC+LG + +FGG+ + ND+ LD T + T+G+P+ R H
Sbjct: 130 GHSACVLG-----KIMYIFGGYEQLA-DCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFH 183
Query: 348 TSSLIGDHMFIIGGRAD---PLNILSDVW-----VFNMAKSKWTLLECSGSVFQP--RHR 397
+++++G+HM++ GGRAD P + ++++ VF+ W L+C + P R
Sbjct: 184 SATMLGNHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAW--LDCPHTPVLPEGRRS 241
Query: 398 HAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
H+A ++Y+FGG N + F L + + WK++ G+GPC R G
Sbjct: 242 HSAFGYNGELYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGD 301
Query: 456 RLYMFGGY--NGEKALGDLYTFDVHACL 481
++ +FGG + E+ LGD + H+ L
Sbjct: 302 KIVLFGGTSPSPEEGLGDEFDLIDHSDL 329
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 395 RHRHAAAVIGSKIYVFGGLNNDTIFSSL-----HVLDTDTLQWKEL-----LINGEGPCA 444
R HAA +G ++Y FGG + + +L H+ + +L+W +L + G+ P
Sbjct: 14 RVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVRPAVRGQAPVV 73
Query: 445 ---RHSHSMLAYGSRLYMFGGYNG-EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM 500
R+ HS + ++++GG N E A LY FDV+ W ++ P AR H+
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 501 FLYKNYLGLFGG 512
+ + +FGG
Sbjct: 134 CVLGKIMYIFGG 145
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVH-----ACLWKK 484
L+W L EG R +H+ +A G R+Y FGGY + L DVH + W K
Sbjct: 2 LRWTVHL---EGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTK 58
Query: 485 --------EDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQE-----LSLLDLQLHI 531
A P+ R+ H+ L + + L+GG +N E L D+ H
Sbjct: 59 LPPVRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGG----RNDTEGACNVLYAFDVNTHK 114
Query: 532 W 532
W
Sbjct: 115 W 115
>sp|Q8VEM9|KLDC3_MOUSE Kelch domain-containing protein 3 OS=Mus musculus GN=Klhdc3 PE=2
SV=1
Length = 382
Score = 99.8 bits (247), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 13/235 (5%)
Query: 341 PSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA 400
P R GH++ LI D +F+ GGR D + ++ F++ KW+ SG+V R H+A
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 401 AVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLY 458
V+G +Y+FGG D + +H LDT T+ W + G R HS G+ +Y
Sbjct: 134 CVLGKIMYIFGGYEQLADCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFHSATMLGNHMY 193
Query: 459 MFGGY---------NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGL 509
+FGG N E + FD W P R SH+ F Y L +
Sbjct: 194 VFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPHTPVLPEGRRSHSAFGYNGELYI 253
Query: 510 FGGCPVRQN--YQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
FGG R N + +L + WK ++ R +V D +++ GG
Sbjct: 254 FGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGG 308
Score = 87.4 bits (215), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP-RLGH 347
GHSAC+LG + +FGG+ + ND+ LD T + T+G+P+ R H
Sbjct: 130 GHSACVLGKI-----MYIFGGYEQLA-DCFSNDIHKLDTSTMTWTLVCTKGNPARWRDFH 183
Query: 348 TSSLIGDHMFIIGGRAD---PLNILSDVW-----VFNMAKSKWTLLECSGSVFQP--RHR 397
+++++G+HM++ GGRAD P + ++++ VF+ W L+C + P R
Sbjct: 184 SATMLGNHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAW--LDCPHTPVLPEGRRS 241
Query: 398 HAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
H+A ++Y+FGG N + F L + + WK++ G+GPC R G
Sbjct: 242 HSAFGYNGELYIFGGYNARLNRHFHDLWKFNPGSFTWKKIEPKGKGPCPRRRQCCCIVGD 301
Query: 456 RLYMFGGY--NGEKALGDLYTFDVHACL 481
++ +FGG + E+ LGD + H+ L
Sbjct: 302 KIVLFGGTSPSPEEGLGDEFDLIDHSDL 329
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 395 RHRHAAAVIGSKIYVFGGLNNDTIFSSL-----HVLDTDTLQWKEL-----LINGEGPCA 444
R HAA +G ++Y FGG + + +L H+ + +L+W +L + G+ P
Sbjct: 14 RVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVRPAVRGQAPVV 73
Query: 445 ---RHSHSMLAYGSRLYMFGGYNG-EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM 500
R+ HS + ++++GG N E A LY FDV+ W ++ P AR H+
Sbjct: 74 PYMRYGHSTVLIDDTVFLWGGRNDTEGACNVLYAFDVNTHKWSTPRVSGTVPGARDGHSA 133
Query: 501 FLYKNYLGLFGG 512
+ + +FGG
Sbjct: 134 CVLGKIMYIFGG 145
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 25/151 (16%)
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVH-----ACLWKK 484
L+W L EG R +H+ +A G R+Y FGGY + L DVH + W K
Sbjct: 2 LRWTVHL---EGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTK 58
Query: 485 --------EDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQE-----LSLLDLQLHI 531
A P+ R+ H+ L + + L+GG +N E L D+ H
Sbjct: 59 LPPVRPAVRGQAPVVPYMRYGHSTVLIDDTVFLWGG----RNDTEGACNVLYAFDVNTHK 114
Query: 532 WKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562
W +++ +A V+ + + GG
Sbjct: 115 WSTPRVSGTVPGARDGHSACVLGKIMYIFGG 145
>sp|Q9BQ90|KLDC3_HUMAN Kelch domain-containing protein 3 OS=Homo sapiens GN=KLHDC3 PE=2
SV=1
Length = 382
Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 106/251 (42%), Gaps = 14/251 (5%)
Query: 325 LDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTL 384
L P++ I+ P R GH++ LI D + + GGR D + ++ F++ KW
Sbjct: 59 LPPVKSAIRG-QAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFT 117
Query: 385 LECSGSVFQPRHRHAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGP 442
SG+V R H+A V+G +Y+FGG D + +H LDT T+ W + G
Sbjct: 118 PRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKGSPA 177
Query: 443 CARHSHSMLAYGSRLYMFGGY---------NGEKALGDLYTFDVHACLWKKEDIAARSPH 493
R HS GS +Y+FGG N E + FD W P
Sbjct: 178 RWRDFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPE 237
Query: 494 ARFSHTMFLYKNYLGLFGGCPVRQN--YQELSLLDLQLHIWKHLKLNYVCKELFVRSTAN 551
R SH+ F Y L +FGG R N + +L + WK ++ R
Sbjct: 238 GRRSHSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCC 297
Query: 552 VVDDDLIMIGG 562
+V D +++ GG
Sbjct: 298 IVGDKIVLFGG 308
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 23/208 (11%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP-RLGH 347
GHSAC+LG + +FGG+ ND+ LD T I T+GSP+ R H
Sbjct: 130 GHSACVLGKI-----MYIFGGYEQQA-DCFSNDIHKLDTSTMTWTLICTKGSPARWRDFH 183
Query: 348 TSSLIGDHMFIIGGRAD---PLNILSDVW-----VFNMAKSKWTLLECSGSVFQP--RHR 397
+++++G HM++ GGRAD P + ++++ VF+ W L+C + P R
Sbjct: 184 SATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAW--LDCPPTPVLPEGRRS 241
Query: 398 HAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455
H+A ++Y+FGG N + F L + + WK++ G+GPC R G
Sbjct: 242 HSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGD 301
Query: 456 RLYMFGGY--NGEKALGDLYTFDVHACL 481
++ +FGG + E+ LGD + H+ L
Sbjct: 302 KIVLFGGTSPSPEEGLGDEFDLIDHSDL 329
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 395 RHRHAAAVIGSKIYVFGGLNNDTIFSSL-----HVLDTDTLQWKEL-----LINGEGPCA 444
R HAA +G ++Y FGG + + +L H+ + +L+W +L I G+ P
Sbjct: 14 RVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVKSAIRGQAPVV 73
Query: 445 ---RHSHSMLAYGSRLYMFGGYNG-EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM 500
R+ HS + + ++GG N E A LY FDV+ W ++ P AR H+
Sbjct: 74 PYMRYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFTPRVSGTVPGARDGHSA 133
Query: 501 FLYKNYLGLFGG 512
+ + +FGG
Sbjct: 134 CVLGKIMYIFGG 145
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 25/121 (20%)
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVH-----ACLWKK 484
L+W L EG R +H+ +A G R+Y FGGY + L DVH + W K
Sbjct: 2 LRWTVHL---EGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTK 58
Query: 485 --------EDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQE-----LSLLDLQLHI 531
A P+ R+ H+ L + + L+GG +N E L D+ H
Sbjct: 59 LPPVKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGG----RNDTEGACNVLYAFDVNTHK 114
Query: 532 W 532
W
Sbjct: 115 W 115
>sp|Q8VCH5|RABEK_MOUSE Rab9 effector protein with kelch motifs OS=Mus musculus GN=Rabepk
PE=2 SV=2
Length = 380
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEGSP-SPRLGHTSSL-IGDHMFIIGGRADPLN 367
FGG + RN L ++ P T GSP SPR HTSS IG+ +++ GG
Sbjct: 112 FGGADQSGNRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHTSSAAIGNQLYVFGGGERGAQ 171
Query: 368 ILSDV--WVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425
+ DV VF+ W+ E GS PRH H G+K+++ GGL D F LH +
Sbjct: 172 PVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGTKLFIHGGLAGDKFFDDLHCI 231
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE 485
D + W++L G P +H+ +A G +YMFGG AL +Y + W
Sbjct: 232 DIGDMSWQKLGPTGAVPVGCAAHAAVAVGHHVYMFGGMTATGALNMMYKYHTEKQHWTVL 291
Query: 486 DIAARSPHARFSHTM 500
P R H+M
Sbjct: 292 QFDTSLPAGRLDHSM 306
Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 341 PSPRLGHTSSL---IGD----HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQ 393
P PR+GH+ S +GD +FI+GG A+P SDV ++ +W G
Sbjct: 36 PCPRVGHSCSYFPPVGDAESGKIFIVGG-ANPNQSFSDVHTMDLGTHQWDTATREG--LL 92
Query: 394 PRHRHAA---AVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSH-S 449
PR+ HA+ + I+VFGG + + L V+ + W + G P R H S
Sbjct: 93 PRYEHASFLPSCSPHSIWVFGGADQSGNRNCLQVMSPEDRTWSTPEVTGSPPSPRTFHTS 152
Query: 450 MLAYGSRLYMFGG-YNGEKALGD--LYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNY 506
A G++LY+FGG G + + D L+ FD + W + + P R H M
Sbjct: 153 SAAIGNQLYVFGGGERGAQPVEDVKLHVFDANTLTWSQPETHGSPPSPRHGHVMVAAGTK 212
Query: 507 LGLFGGCPVRQNYQELSLLDLQLHIWKHL 535
L + GG + + +L +D+ W+ L
Sbjct: 213 LFIHGGLAGDKFFDDLHCIDIGDMSWQKL 241
>sp|Q5JFK6|Y175_PYRKO UPF0130 protein TK0175 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=TK0175 PE=3 SV=1
Length = 198
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPV 99
+F+++K + L + + +D IIPLL IN+ NY+TTSSCSGRIS+ P
Sbjct: 7 NFDEQKEKAMEGLRKALEE----DKVDHDIIPLLEKINALQNYFTTSSCSGRISVMEMPH 62
Query: 100 NKPK-GGTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVES 158
K WL H ++ VL + H + QL F I+ V R +E
Sbjct: 63 FGDKVNSVWLGKWHREVRLEEVLEAV--GKHRSG------QLWFLVRSPILHVGARTLED 114
Query: 159 AEALVSIAVSSGLRESGVTSVK-KRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIA 217
A L+++A+ G + S + SV K+++V IR + R++VPLGE+G + V + Y+ +V +A
Sbjct: 115 AVRLLNLAIGLGFKYSNIKSVSHKKLVVEIRSTERMDVPLGENGELWVDEAYIEKIVNLA 174
Query: 218 NQKLEANSRRIDGFLQ 233
N A RR G L+
Sbjct: 175 N----AQVRRFKGKLK 186
>sp|Q7M3S9|RNGB_DICDI RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2
Length = 943
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 28/266 (10%)
Query: 270 LSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQ 329
+ R+ + G P + WGH+ L N S +VFGG + ND+ +
Sbjct: 3 IDCKRVSLIGSPEPR---WGHTGTTLPNG---SGFIVFGG----NSNRAFNDIQYYNIFN 52
Query: 330 GTIKAIHTEG-SPSPRLGHTSSLIGDH---------MFIIGGRA--DPLNILSDVWVFNM 377
+ I G +PS R GH++ L + GGRA P + ++ ++V +
Sbjct: 53 NSWSKIEAVGNAPSERYGHSAVLYQSQSRPYSDSYQIIFFGGRATSKPFSDINILYVNSN 112
Query: 378 AKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNN--DTIFSSLHVLDTDTLQWKEL 435
W + + + R H A V + VFGG NN ++S+ + ++ +W++
Sbjct: 113 RSFIWK--QVTTKSIEGRAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLLFSLESNEWRQQ 170
Query: 436 LINGEGPCARHSHSMLAYGS-RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHA 494
+ G P AR +HS + ++++FGGY+G+K D+Y D+ +WKK + P
Sbjct: 171 VCGGVIPSARATHSTFQVNNNKMFIFGGYDGKKYYNDIYYLDLETWIWKKVEAKGTPPKP 230
Query: 495 RFSHT-MFLYKNYLGLFGGCPVRQNY 519
R H+ + N L +FGGC N+
Sbjct: 231 RSGHSATMIQNNKLMIFGGCGSDSNF 256
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 333 KAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGS 390
K + GSP PR GHT + + G + GG ++ +D+ +N+ + W+ +E G+
Sbjct: 6 KRVSLIGSPEPRWGHTGTTLPNGSGFIVFGGNSN--RAFNDIQYYNIFNNSWSKIEAVGN 63
Query: 391 VFQPRHRHAAAVIGSK---------IYVFGGLNNDTIFSSLHVLDTDTLQ---WKELLIN 438
R+ H+A + S+ I FGG FS +++L ++ + WK++
Sbjct: 64 APSERYGHSAVLYQSQSRPYSDSYQIIFFGGRATSKPFSDINILYVNSNRSFIWKQVTTK 123
Query: 439 G-EGPCARHSHSMLAYGSRLYMFGGYNGEKA--LGDLYTFDVHACLWKKEDIAARSPHAR 495
EG R H+ + Y L +FGG+N K+ + F + + W+++ P AR
Sbjct: 124 SIEG---RAGHTAVVYRQNLVVFGGHNNHKSKYYNSVLLFSLESNEWRQQVCGGVIPSAR 180
Query: 496 FSHTMF-LYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVD 554
+H+ F + N + +FGG ++ Y ++ LDL+ IWK ++ + +A ++
Sbjct: 181 ATHSTFQVNNNKMFIFGGYDGKKYYNDIYYLDLETWIWKKVEAKGTPPKPRSGHSATMIQ 240
Query: 555 DDLIMIGGGAA 565
++ +MI GG
Sbjct: 241 NNKLMIFGGCG 251
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 341 PSPRLGHTSSLIGDH-MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHA 399
PS R H++ + ++ MFI GG D +D++ ++ W +E G+ +PR H+
Sbjct: 177 PSARATHSTFQVNNNKMFIFGG-YDGKKYYNDIYYLDLETWIWKKVEAKGTPPKPRSGHS 235
Query: 400 AAVI-GSKIYVFGGLNNDTIFSS----LHVLDTDTLQWKELLING-EGPCARHSHSMLAY 453
A +I +K+ +FGG +D+ F + LH+ + +W++ G E P AR H+
Sbjct: 236 ATMIQNNKLMIFGGCGSDSNFLNDIHILHIEGANEYRWEQPSYLGLEIPQARFRHTTNFI 295
Query: 454 GSRLYMFGGYNGEKALGDLYTFD 476
G R+Y++ G +GDL+T +
Sbjct: 296 GGRVYIYAGTGSGNLMGDLHTLE 318
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 299 INDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSP-SPRLGHTSSLIGDH-M 356
+N++++ +FGG+ G + ND++ LD K + +G+P PR GH++++I ++ +
Sbjct: 188 VNNNKMFIFGGYDGKKYY---NDIYYLDLETWIWKKVEAKGTPPKPRSGHSATMIQNNKL 244
Query: 357 FIIGGRADPLNILSDVWVFNMA---KSKWTLLECSG-SVFQPRHRHAAAVIGSKIYVFGG 412
I GG N L+D+ + ++ + +W G + Q R RH IG ++Y++ G
Sbjct: 245 MIFGGCGSDSNFLNDIHILHIEGANEYRWEQPSYLGLEIPQARFRHTTNFIGGRVYIYAG 304
Query: 413 LNNDTIFSSLHVLD 426
+ + LH L+
Sbjct: 305 TGSGNLMGDLHTLE 318
>sp|Q04235|TYW2_YEAST tRNA wybutosine-synthesizing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TRM12 PE=1 SV=1
Length = 462
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 111/222 (50%), Gaps = 32/222 (14%)
Query: 859 WVKHCENGILYSFDATKCMFSWGNLSEKLRMARL--DCKDEVIVDLFAGIGYFVLPFLVR 916
W K +NG+ + MFS GN+ EK R+ D + +VDL+AGIGYF +L +
Sbjct: 237 WCKVIQNGVTQIWSPVFTMFSRGNIKEKKRVLTTFPDICNNDVVDLYAGIGYFTFSYLTK 296
Query: 917 AKARLVYACEWNPCAVEALKHNLQANSV--SDHCIVLEGDNRFTAPK---------GVAN 965
AR ++A E NP +VE LK L+AN S +C V + N + G
Sbjct: 297 G-ARTLFAFELNPWSVEGLKRGLKANGFNKSGNCHVFQESNEMCVQRLTEFLSQNPGFRL 355
Query: 966 R---VCLGLIPTSENSWVTAVQALRSEGG-----TLHVHGNV------KDSEEK---LWA 1008
R + LGL+P+S+ W A++ + +G T+H+H NV S EK +
Sbjct: 356 RIRHINLGLLPSSKQGWPLAIKLIYLQGASLEKVTMHIHENVHIDAIEDGSFEKNVIVEL 415
Query: 1009 EHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLVADV 1050
+ +++SI + R+ G + + +ER+K +AP I H+ DV
Sbjct: 416 DAINESI-ALIRNRGIKLQFVRSKLERIKTFAPDIWHVCVDV 456
>sp|P80197|AFK_PHYPO Actin-fragmin kinase OS=Physarum polycephalum PE=1 SV=2
Length = 737
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 127/263 (48%), Gaps = 15/263 (5%)
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHTEG-SPSPRLGHTSSLIGDHMFIIGGRADPLNI 368
FGG+ ND ++ D + + +G +PSPR GH++++ G M+I GG +
Sbjct: 435 FGGVCIKTASNDFYVFDFAKKKWSIVVAQGEAPSPRCGHSATVYGGKMWIFGGHNNNKQP 494
Query: 369 LSDVWVFNMAKSKWTLLECS--GSVFQPRHRHAAAVIGSKIYVFGGLNNDTIF-SSLHVL 425
SD++ F+ AKS W +E + G PR+ H+A ++G+ +Y+FGG + + + + ++V
Sbjct: 495 YSDLYTFDFAKSTWEKIEPTKDGPWPSPRYHHSATLVGASLYIFGGAEHKSKYHNDVYVY 554
Query: 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGE---KALGDLYTFDVHACLW 482
D QW+ L GE P R + + + L+ FGG+ GE + D + F++ +
Sbjct: 555 KFDANQWELLNATGETPEPRAGQMTVEWNNSLFTFGGHGGEGGYTSFVDAHVFEIATNTF 614
Query: 483 KKEDIAARSPH-AR-FSHTMFLY------KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534
+ D + P AR S+ + Y + + FGG + L +L+ H WK
Sbjct: 615 HEVDCSGTFPRTARPLSYVPYYYGSGDKREGAVFSFGGSDGKSPLGSLYQWNLKTHKWKI 674
Query: 535 LKLNYVCKELFVRSTANVVDDDL 557
+K ++ + S A + L
Sbjct: 675 IKAWMAVEDNTIGSMAAIASGKL 697
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 332 IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSV 391
+K + P+PR H+ L +++ GG +D +VF+ AK KW+++ G
Sbjct: 408 LKVVVPNEKPAPRRYHSGVLYEGKLYVFGGVCIK-TASNDFYVFDFAKKKWSIVVAQGEA 466
Query: 392 FQPRHRHAAAVIGSKIYVFGGLNND-TIFSSLHVLDTDTLQWKELLINGEG--PCARHSH 448
PR H+A V G K+++FGG NN+ +S L+ D W+++ +G P R+ H
Sbjct: 467 PSPRCGHSATVYGGKMWIFGGHNNNKQPYSDLYTFDFAKSTWEKIEPTKDGPWPSPRYHH 526
Query: 449 SMLAYGSRLYMFGGY-NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYL 507
S G+ LY+FGG + K D+Y + A W+ + +P R + N L
Sbjct: 527 SATLVGASLYIFGGAEHKSKYHNDVYVYKFDANQWELLNATGETPEPRAGQMTVEWNNSL 586
Query: 508 GLF 510
F
Sbjct: 587 FTF 589
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Query: 394 PRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY 453
PR H+ + K+YVFGG+ T + +V D +W ++ GE P R HS Y
Sbjct: 419 PRRYHSGVLYEGKLYVFGGVCIKTASNDFYVFDFAKKKWSIVVAQGEAPSPRCGHSATVY 478
Query: 454 GSRLYMFGGYNGEKA-LGDLYTFDVHACLWKKEDIAARS--PHARFSHTMFLYKNYLGLF 510
G ++++FGG+N K DLYTFD W+K + P R+ H+ L L +F
Sbjct: 479 GGKMWIFGGHNNNKQPYSDLYTFDFAKSTWEKIEPTKDGPWPSPRYHHSATLVGASLYIF 538
Query: 511 GGCPVRQNYQ 520
GG + Y
Sbjct: 539 GGAEHKSKYH 548
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 21/209 (10%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGS---PSPRL 345
GHSA + G ++ +FGG +DL+ D + T + I PSPR
Sbjct: 472 GHSATVYGG-----KMWIFGGHNN--NKQPYSDLYTFDFAKSTWEKIEPTKDGPWPSPRY 524
Query: 346 GHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGS 405
H+++L+G ++I GG +DV+V+ ++W LL +G +PR +
Sbjct: 525 HHSATLVGASLYIFGGAEHKSKYHNDVYVYKFDANQWELLNATGETPEPRAGQMTVEWNN 584
Query: 406 KIYVFGGLNNDTIFSSL---HVLDTDTLQWKELLINGEGP-CARH-SHSMLAYGS----- 455
++ FGG + ++S HV + T + E+ +G P AR S+ YGS
Sbjct: 585 SLFTFGGHGGEGGYTSFVDAHVFEIATNTFHEVDCSGTFPRTARPLSYVPYYYGSGDKRE 644
Query: 456 -RLYMFGGYNGEKALGDLYTFDVHACLWK 483
++ FGG +G+ LG LY +++ WK
Sbjct: 645 GAVFSFGGSDGKSPLGSLYQWNLKTHKWK 673
>sp|Q54C94|GEFF_DICDI Ras guanine nucleotide exchange factor F OS=Dictyostelium
discoideum GN=gefF PE=2 SV=1
Length = 1127
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 180/417 (43%), Gaps = 58/417 (13%)
Query: 289 GHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKA--IHTEGS-PSPRL 345
H+ C+ D +FGG G + ND + Q IKA I T GS PS R
Sbjct: 203 NHTYCV-----GDDGFYLFGGTLPDGSYT--NDFYTF---QFAIKAWTILTFGSAPSIRT 252
Query: 346 GHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGS 405
HT L + M+I GG + P +D++VF+ W+ ++ G+ PR+ H A V
Sbjct: 253 RHTGVLYNNSMYIFGGYS-PSGPKNDIYVFSFDTQTWSEVQTEGTKPSPRYGHTAVVESG 311
Query: 406 KIYVFGGLNND------TIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYM 459
+ VFGG++ D T+ + + L+ DT QW ++L P R H+ + +Y+
Sbjct: 312 HMIVFGGISCDQTTKQQTVNNDIFSLNLDTKQWSQVLSTCP-PSPRTHHTATMHKGNMYV 370
Query: 460 FGGYNGE-KALGDL---YTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPV 515
FGG + + + D+ YT+ ++ WK S R H+ L+++ + + GG
Sbjct: 371 FGGQDQQSNQVEDIVHCYTWASNS--WKSIQFEGSSMTPRSDHSAVLFQDSIFISGGSSK 428
Query: 516 RQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA-----CYAFG 570
Q Q L + + L+ K K++ S ++VV + I+ GG ++FG
Sbjct: 429 SQTSQNLEIYEYDLYQKKCFKISSSTIVQNRISHSSVVKGNSILFWGGCTDNSFDYFSFG 488
Query: 571 T-KFSEPVKINLSSVPLMSLDDCNIPPEMGE-KLVTHHYEGVTGEKNVNFQALEL-GNTQ 627
+F E + + S + NIP E+ E L+ H E LEL T
Sbjct: 489 KDEFEEDYQDDYESNRVQ-----NIPKELWEASLMKKHPE-----------ILELREKTL 532
Query: 628 TLTESSDFNSEAKHPVNDGHQMAASH-WVVEL------DKKYAKFGKDILKKFGWLH 677
T S F P +++A SH +V++L Y K I K+ G LH
Sbjct: 533 AFTGSKSFAKTLATPSFSENRLALSHQFVLQLIMEYLERNTYHKVIAAIQKESGVLH 589
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 13/232 (5%)
Query: 343 PRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAV 402
P HT + D ++ GG + +D + F A WT+L GS R RH +
Sbjct: 200 PHNNHTYCVGDDGFYLFGGTLPDGSYTNDFYTFQFAIKAWTILTF-GSAPSIRTRHTGVL 258
Query: 403 IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGG 462
+ +Y+FGG + + ++V DT W E+ G P R+ H+ + + +FGG
Sbjct: 259 YNNSMYIFGGYSPSGPKNDIYVFSFDTQTWSEVQTEGTKPSPRYGHTAVVESGHMIVFGG 318
Query: 463 YNGEKAL------GDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVR 516
+ ++ D+++ ++ W + ++ P R HT ++K + +FGG +
Sbjct: 319 ISCDQTTKQQTVNNDIFSLNLDTKQWSQV-LSTCPPSPRTHHTATMHKGNMYVFGGQDQQ 377
Query: 517 QNYQE--LSLLDLQLHIWKHLKLNYVCKELFVRST-ANVVDDDLIMIGGGAA 565
N E + + WK ++ + + RS + V+ D I I GG++
Sbjct: 378 SNQVEDIVHCYTWASNSWKSIQ--FEGSSMTPRSDHSAVLFQDSIFISGGSS 427
>sp|Q39610|DYHA_CHLRE Dynein alpha chain, flagellar outer arm OS=Chlamydomonas
reinhardtii GN=ODA11 PE=3 SV=2
Length = 4499
Score = 93.6 bits (231), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 33/335 (9%)
Query: 289 GHSACILGNSINDSQILVFGGFGGM-GRHARRNDLFLLD---PLQGTIKAIHTEGSPSPR 344
GHS +LG + ++FGG G G+ A NDL+ LD P + K + +P PR
Sbjct: 20 GHSFTVLG-----ERFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKELVVANAPPPR 74
Query: 345 LGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIG 404
H + + D ++ G + +DVW+FN WT +E G+ +PR A G
Sbjct: 75 ARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEVEGAAPEPRAHFTATRFG 134
Query: 405 SKIYVFGGLNND-TIFSSLHVLD--TDTLQWKELL--INGEGPCARHSHSMLAYG----- 454
S++++FGG +++ + VL D +W+ + I G GP R HS Y
Sbjct: 135 SRVFIFGGYGGSGQVYNEMWVLHFGEDGFRWQNITESIEGTGPAPRFDHSAFIYPVTPNS 194
Query: 455 ---SRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM-----FLYKNY 506
+L + GG + + D + D++ W+ E P+ ++ Y
Sbjct: 195 DTYDKLLIMGGRDLSQMYQDSHMLDLNKMAWENETQPPTLPYEICNNVCDGIESVPYHKV 254
Query: 507 LGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDL--IMIGGGA 564
G + Q + ++D +W +++ + TA V D ++I GG
Sbjct: 255 FSFGGRKGMMQYLNTVEVMDCGTQMWSTPPVDHGVAPVGREDTAWVFDVKTCSLLIFGGW 314
Query: 565 ACYAFGTKFSEPVKINLSSVPLMSLDDCNIPPEMG 599
A G K+N+S + I PEMG
Sbjct: 315 ANRWLGDLH----KLNVSPIIGPPYACTAIQPEMG 345
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 340 SPSPRLGHTSSLIGDHMFIIG------GRADPLNILSDVWVFNMAKSKWTLLECSGSVFQ 393
+P PR GH+ +++G+ + G G+A N L ++ + + KW L + +
Sbjct: 14 APCPRSGHSFTVLGERFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKELVVANAP-P 72
Query: 394 PRHRHAAAVIGSK-IYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA 452
PR RHAA + K + VFGGLN ++ + + + D W + + G P R +
Sbjct: 73 PRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEVEGAAPEPRAHFTATR 132
Query: 453 YGSRLYMFGGYNGEKALGDLYT------FDVHACLWKK--EDIAARSPHARFSHTMFLYK 504
+GSR+++FGGY G G +Y F W+ E I P RF H+ F+Y
Sbjct: 133 FGSRVFIFGGYGGS---GQVYNEMWVLHFGEDGFRWQNITESIEGTGPAPRFDHSAFIYP 189
Query: 505 --------NYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534
+ L + GG + Q YQ+ +LDL W++
Sbjct: 190 VTPNSDTYDKLLIMGGRDLSQMYQDSHMLDLNKMAWEN 227
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 382 WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNND----TIFSSLHVLDT---DTLQWKE 434
W + G PR H+ V+G + +FGG F+ L+ LDT D +WKE
Sbjct: 5 WEVPNAQGEAPCPRSGHSFTVLGERFVLFGGCGRKDGKAAAFNDLYELDTSDPDEYKWKE 64
Query: 435 LLI-NGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDI--AARS 491
L++ N P ARH+ L RL +FGG N D++ F+ W ++ AA
Sbjct: 65 LVVANAPPPRARHAAIALD-DKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEVEGAAPE 123
Query: 492 PHARFSHTMFLYKNYL-GLFGGCPVRQNYQELSLL 525
P A F+ T F + ++ G +GG Q Y E+ +L
Sbjct: 124 PRAHFTATRFGSRVFIFGGYGGS--GQVYNEMWVL 156
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 432 WKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEK-----ALGDLY---TFDVHACLWK 483
W+ GE PC R HS G R +FGG G K A DLY T D W
Sbjct: 5 WEVPNAQGEAPCPRSGHSFTVLGERFVLFGGC-GRKDGKAAAFNDLYELDTSDPDEYKW- 62
Query: 484 KEDIAARSPHARFSH-TMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCK 542
KE + A +P R H + L L +FGG R Y ++ L + W +++
Sbjct: 63 KELVVANAPPPRARHAAIALDDKRLLVFGGLNKRIRYNDVWLFNYDDKSWTCMEVEGAAP 122
Query: 543 ELFVRSTANVVDDDLIMIGG 562
E TA + + GG
Sbjct: 123 EPRAHFTATRFGSRVFIFGG 142
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 15/133 (11%)
Query: 395 RHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDT---LQWKELLINGEGPCARHSHSML 451
R+ H A I +YV G ++ + + L ++DT W E ++ G+ P R + +
Sbjct: 738 RNSHVAVAIDKDLYVMMGDHDGDLMTELAMVDTSDRTCAHWLEPILKGDVPVPRKACAAA 797
Query: 452 AYGSRLYMFGGY----NGEKAL-GDLYTFDV------HACLWKKEDIAARSPHARFSHTM 500
A G+ + +FGG +GE + GDL +V + A+ SP AR+ M
Sbjct: 798 ATGNTIVLFGGQTQNADGEATVTGDLVIMEVTGPNSIQCAVNPAAPGASGSPAARYGAVM 857
Query: 501 FLYKN-YLGLFGG 512
+ N L L GG
Sbjct: 858 QEFSNGKLFLHGG 870
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 15/157 (9%)
Query: 342 SPRLGHTSSLIGDHMFIIGGR--ADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHA 399
S R H + I ++++ G D + L+ V + + W G V PR A
Sbjct: 736 SARNSHVAVAIDKDLYVMMGDHDGDLMTELAMVDTSDRTCAHWLEPILKGDVPVPRKACA 795
Query: 400 AAVIGSKIYVFGGLNND-----TIFSSLHVLDTDTLQWKELLINGEG------PCARHSH 448
AA G+ I +FGG + T+ L +++ + +N P AR+
Sbjct: 796 AAATGNTIVLFGGQTQNADGEATVTGDLVIMEVTGPNSIQCAVNPAAPGASGSPAARYGA 855
Query: 449 SMLAYGS-RLYMFGGYN-GEKALGDLYTFDVHACLWK 483
M + + +L++ GG + K L D + FDV + W+
Sbjct: 856 VMQEFSNGKLFLHGGMDAASKPLNDGWLFDVPSKTWQ 892
>sp|Q9V1Y5|Y289_PYRAB UPF0130 protein PYRAB02890 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=PYRAB02890 PE=3 SV=1
Length = 206
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 62 KGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVNKPKG-GTWLFITHDPADVDSV 120
+G +D II LL INS YTTSSCSGRI I P K WL H P + +
Sbjct: 17 EGKVDEDIIDLLMLINSIKGVYTTSSCSGRIGIIEEPSLGAKPLSRWLIKVHRPMEFEEA 76
Query: 121 LSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVK 180
+ L + + + +P I+ V ++E A+ L I +SSG + + +
Sbjct: 77 IDAL--------KKANKGIIFLKSQPPILHVVAENLEMAKLLHQIGLSSGFKYTTFKVIS 128
Query: 181 KRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRIDGFLQAFN 236
R +V I + L VPLG G VLVS++Y++F V I N+ L R+ + F
Sbjct: 129 NRYLVEINGTEYLTVPLGRDGKVLVSEEYLKFAVEIGNEMLRRGKSRLPRLYKNFQ 184
>sp|Q5R4Q7|LZTR1_PONAB Leucine-zipper-like transcriptional regulator 1 OS=Pongo abelii
GN=LZTR1 PE=2 SV=1
Length = 840
Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 122/290 (42%), Gaps = 23/290 (7%)
Query: 267 SCGLSVSRIVIAGEPVEKLFLWGH-SAC--ILGNSINDSQILVFGG----FGGMGRHARR 319
SC SV + + P E + W C +G + ++ + FGG
Sbjct: 33 SCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTML 92
Query: 320 NDLFLLDPLQGT-IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRA------DPLNILSDV 372
NDL D + +A T P+PR H++ + G MF+ GG A L +D+
Sbjct: 93 NDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYAGDIYSNSNLKNKNDL 152
Query: 373 WVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL---DTDT 429
+ + A +WT + G + R H A V K+++F G + + + + + D +
Sbjct: 153 FEYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDREL 212
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK---ED 486
W+E+ +GE P + + + ++++F G +G K +L+ F+ W + E
Sbjct: 213 TCWEEVAQSGEIPPSCCNFPVAVRRDKMFVFSGQSGAKITNNLFQFEFKDKTWTRIPTEH 272
Query: 487 IAARSP---HARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533
+ SP R+ HTM + +L +FGG EL D+ W+
Sbjct: 273 LLRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNTLPNELHCYDVDFQTWE 322
Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 381 KWTLLE-CSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING 439
+W L C V R +H IYVFGG N T+ + L D W G
Sbjct: 53 RWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTG 112
Query: 440 EGPCARHSHSMLAYGSRLYMFGGYNGE-------KALGDLYTFDVHACLWKKEDIAARSP 492
P R+ HS + YGS +++FGGY G+ K DL+ + W + I R P
Sbjct: 113 TPPAPRYHHSAVVYGSSMFVFGGYAGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLP 172
Query: 493 HARFSHTMFLYKNYLGLFGGCPVRQNYQEL---SLLDLQLHIWKHL 535
AR +H +Y + L +F G ++ L D +L W+ +
Sbjct: 173 VARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDRELTCWEEV 218
>sp|Q8N653|LZTR1_HUMAN Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens
GN=LZTR1 PE=2 SV=2
Length = 840
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 23/290 (7%)
Query: 267 SCGLSVSRIVIAGEPVEKLFLWGH-SAC--ILGNSINDSQILVFGG----FGGMGRHARR 319
SC SV + + P E + W C +G + ++ + FGG
Sbjct: 33 SCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTML 92
Query: 320 NDLFLLDPLQGT-IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRA------DPLNILSDV 372
NDL D + +A T P+PR H++ + G MF+ GG L +D+
Sbjct: 93 NDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDL 152
Query: 373 WVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL---DTDT 429
+ + A +WT + G + R H A V K+++F G + + + + + D +
Sbjct: 153 FEYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDREL 212
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK---ED 486
W+E+ +GE P + + + ++++F G +G K +L+ F+ W + E
Sbjct: 213 TCWEEVAQSGEIPPSCCNFPVAVCRDKMFVFSGQSGAKITNNLFQFEFKDKTWTRIPTEH 272
Query: 487 IAARSP---HARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533
+ SP R+ HTM + +L +FGG EL D+ W+
Sbjct: 273 LLRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNTLPNELHCYDVDFQTWE 322
Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 381 KWTLLE-CSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING 439
+W L C V R +H IYVFGG N T+ + L D W G
Sbjct: 53 RWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTG 112
Query: 440 EGPCARHSHSMLAYGSRLYMFGGYNGE-------KALGDLYTFDVHACLWKKEDIAARSP 492
P R+ HS + YGS +++FGGY G+ K DL+ + W + I R P
Sbjct: 113 TPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLP 172
Query: 493 HARFSHTMFLYKNYLGLFGGCPVRQNYQEL---SLLDLQLHIWKHL 535
AR +H +Y + L +F G ++ L D +L W+ +
Sbjct: 173 VARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDRELTCWEEV 218
>sp|Q5JES6|Y1907_PYRKO UPF0130 protein TK1907 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=TK1907 PE=3 SV=1
Length = 212
Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats.
Identities = 65/196 (33%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 45 KAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVNKPKG 104
K L SL ++ D G +D II LL INS YTTSSCSGRI I P K
Sbjct: 4 KREALQSLFTAMRD----GKVDGDIIDLLLLINSIKGIYTTSSCSGRIGIIEEPALGAKP 59
Query: 105 -GTWLFITHDPADVDSVLSLLFFPTHTTPSSPTRDQLVF-RFEPLIVAVECRDVESAEAL 162
WL H P + + L ++ ++F + +P I V D+E A L
Sbjct: 60 LSRWLIKVHRPIEFEEAKEAL---------KNAKEGIIFLKSQPPIFHVVAEDLEKARKL 110
Query: 163 VSIAVSSGLRESGVTSVKKRVIVGIRCSLRLEVPLGESGNVLVSQDYVRFLVGIANQ--- 219
+ ++SG + + + KR +V I + L PLG G VLV Y+RF V I N+
Sbjct: 111 HELGLASGFKYTTFKVISKRYLVEINATEYLTAPLGRDGRVLVDDGYLRFAVEIGNEMLR 170
Query: 220 -------KLEANSRRI 228
+LE N RR+
Sbjct: 171 RSKGRLPRLEENFRRL 186
>sp|Q9CQ33|LZTR1_MOUSE Leucine-zipper-like transcriptional regulator 1 OS=Mus musculus
GN=Lztr1 PE=2 SV=2
Length = 837
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 121/290 (41%), Gaps = 23/290 (7%)
Query: 267 SCGLSVSRIVIAGEPVEKLFLWGH-SAC--ILGNSINDSQILVFGG----FGGMGRHARR 319
SC SV + + P E + W C +G + ++ + FGG
Sbjct: 30 SCSDSVEYLTLNFGPFETVHRWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTML 89
Query: 320 NDLFLLDPLQGT-IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRA------DPLNILSDV 372
NDL D + +A T P+PR H++ + G MF+ GG L +D+
Sbjct: 90 NDLLRFDVKDCSWCRAFTTGTPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDL 149
Query: 373 WVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL---DTDT 429
+ + A +WT + G + R H A V K+++F G + + + + + D +
Sbjct: 150 FEYKFATGQWTEWKIEGRLPVARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDREL 209
Query: 430 LQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK---ED 486
W+E+ +GE P + + + ++++F G +G K +L+ F+ W + E
Sbjct: 210 TCWEEVAQSGEIPPSCCNFPVAVCRDKMFVFSGQSGAKITNNLFQFEFKDKTWTRIPTEH 269
Query: 487 IAARSP---HARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533
+ SP R+ HTM + +L +FGG EL D+ W+
Sbjct: 270 LLRGSPPPPQRRYGHTMVAFDRHLYVFGGAADNTLPNELHCYDVDFQTWE 319
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 11/166 (6%)
Query: 381 KWTLLE-CSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING 439
+W L C V R +H IYVFGG N T+ + L D W G
Sbjct: 50 RWRRLPPCDEFVGARRSKHTVVAYKDAIYVFGGDNGKTMLNDLLRFDVKDCSWCRAFTTG 109
Query: 440 EGPCARHSHSMLAYGSRLYMFGGYNGE-------KALGDLYTFDVHACLWKKEDIAARSP 492
P R+ HS + YGS +++FGGY G+ K DL+ + W + I R P
Sbjct: 110 TPPAPRYHHSAVVYGSSMFVFGGYTGDIYSNSNLKNKNDLFEYKFATGQWTEWKIEGRLP 169
Query: 493 HARFSHTMFLYKNYLGLFGGCPVRQNYQEL---SLLDLQLHIWKHL 535
AR +H +Y + L +F G ++ L D +L W+ +
Sbjct: 170 VARSAHGATVYSDKLWIFAGYDGNARLNDMWTIGLQDRELTCWEEV 215
>sp|P38853|KEL1_YEAST Kelch repeat-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KEL1 PE=1 SV=1
Length = 1164
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 142/342 (41%), Gaps = 39/342 (11%)
Query: 257 KNVDGPPGVPSCGLSV-------SRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGG 309
+NV GP LS +RI + P + + H A N QI V GG
Sbjct: 91 RNVSGPSTTLHKQLSKQREYTVWNRIKLQNSPFPR---YRHVASAYVTDKN--QIYVIGG 145
Query: 310 FGGMGRHARRNDLFLLDPLQGTIKAIHT-----EGSPSPRLGHTSSLIGDHMFIIGGRAD 364
+ D ++L + T E +P PR+GH + L G+ + GG
Sbjct: 146 LHDQSVYG---DTWILTAFDNATRFSTTTIDISEATPPPRVGHAAVLCGNAFVVFGGDTH 202
Query: 365 PLN----ILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIG-----SKIYVFGGLNN 415
+N + D+++ N+ KWT+ G R+ H ++I +K+YVFGG +
Sbjct: 203 KVNKEGLMDDDIYLLNINSYKWTVPAPVGPRPLGRYGHKISIIATTQMKTKLYVFGGQFD 262
Query: 416 DTIFSSLHVLDTDTLQ-----WKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALG 470
DT F+ L V D + + W+ L P + +M++Y S+L++FGG + +
Sbjct: 263 DTYFNDLAVYDLSSFRRPDSHWEFLKPRTFTPPPITNFTMISYDSKLWVFGGDTLQGLVN 322
Query: 471 DLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNY-QELSLLDLQL 529
D++ +D W D P H +Y + + + GG Y + L+L+
Sbjct: 323 DVFMYDPAINDWFIIDTTGEKPPPVQEHATVVYNDLMCVVGGKDEHDAYLNSVYFLNLKS 382
Query: 530 HIWKHLKLNYVCKELFVRSTANVV---DDDLIMIGGGAACYA 568
W L + + RS ++ +D ++++GG YA
Sbjct: 383 RKWFKLPV-FTAGIPQGRSGHSLTLLKNDKILIMGGDKFDYA 423
>sp|Q93XW5|NSP5_ARATH Nitrile-specifier protein 5 OS=Arabidopsis thaliana GN=NSP5 PE=2
SV=1
Length = 326
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 332 IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADP-LNILSDVWVFNMAKSKWTLLECSGS 390
+K P R H +++G+ ++ GG P ++I +D++VF++ +W++ +G
Sbjct: 9 LKVGQKGAGPGARSSHAMTVVGNKVYCFGGELKPTIHIDNDLYVFDLETQEWSIAPATGE 68
Query: 391 VFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSM 450
P + IGS IYV+GG ++ ++ LH DT+T +WK L EG R HSM
Sbjct: 69 APFPCFGVSMVTIGSTIYVYGGRDDKRRYNGLHSYDTETNEWKLLAPVEEGLPGRSYHSM 128
Query: 451 LAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLF 510
++Y+FGG + + L+ +DV W + A + R + + + + + +
Sbjct: 129 AGDDRKVYVFGGVTAKGRVNTLHAYDVVDQKWVEYPAAGEACKGRGAPGLVVVEGRIWVL 188
Query: 511 GGCPVRQNYQELSLLDLQLHIWKHLK 536
G + ++ DL WK ++
Sbjct: 189 FGFDGNE-LGDIHCFDLASEQWKAVE 213
Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 379 KSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIF--SSLHVLDTDTLQWKELL 436
++KW + G+ R HA V+G+K+Y FGG TI + L+V D +T +W
Sbjct: 5 ENKWLKVGQKGAGPGARSSHAMTVVGNKVYCFGGELKPTIHIDNDLYVFDLETQEWSIAP 64
Query: 437 INGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWK-----KEDIAARS 491
GE P SM+ GS +Y++GG + ++ L+++D WK +E + RS
Sbjct: 65 ATGEAPFPCFGVSMVTIGSTIYVYGGRDDKRRYNGLHSYDTETNEWKLLAPVEEGLPGRS 124
Query: 492 PHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIW 532
H+ +Y +FGG + L D+ W
Sbjct: 125 YHSMAGDDRKVY-----VFGGVTAKGRVNTLHAYDVVDQKW 160
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 431 QWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKAL--GDLYTFDVHACLWKKEDIA 488
+W ++ G GP AR SH+M G+++Y FGG DLY FD+ W
Sbjct: 7 KWLKVGQKGAGPGARSSHAMTVVGNKVYCFGGELKPTIHIDNDLYVFDLETQEWSIAPAT 66
Query: 489 ARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRS 548
+P F +M + + ++GG ++ Y L D + + WK L V + L RS
Sbjct: 67 GEAPFPCFGVSMVTIGSTIYVYGGRDDKRRYNGLHSYDTETNEWKLLAP--VEEGLPGRS 124
Query: 549 TANVVDDD 556
++ DD
Sbjct: 125 YHSMAGDD 132
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 302 SQILVFGG------FGGMGRH-ARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGD 354
S I V+GG + G+ + N+ LL P++ EG P R H+ +
Sbjct: 83 STIYVYGGRDDKRRYNGLHSYDTETNEWKLLAPVE--------EGLPG-RSYHSMAGDDR 133
Query: 355 HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLN 414
+++ GG + + + +++ KW +G + R V+ +I+V G +
Sbjct: 134 KVYVFGGVTAKGRV-NTLHAYDVVDQKWVEYPAAGEACKGRGAPGLVVVEGRIWVLFGFD 192
Query: 415 NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGG---------YNG 465
+ + +H D + QWK + G+ P AR ++YG + ++GG
Sbjct: 193 GNEL-GDIHCFDLASEQWKAVETTGDVPAARSVFPAVSYGKYIVIYGGEEEPHELMHMGA 251
Query: 466 EKALGDLYTFDVHACLWKK 484
K G++Y D +W++
Sbjct: 252 GKMSGEVYQLDTETLVWER 270
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 35/161 (21%)
Query: 300 NDSQILVFGGFGGMGRHARRNDLFLLD------PLQGTIKAIHTEGSPSPRLGHTSSLIG 353
+D ++ VFGG GR + ++D P G +A G+P
Sbjct: 131 DDRKVYVFGGVTAKGRVNTLHAYDVVDQKWVEYPAAG--EACKGRGAPG----------- 177
Query: 354 DHMFIIGGRADPL-----NILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIY 408
+ ++ GR L N L D+ F++A +W +E +G V R A G I
Sbjct: 178 --LVVVEGRIWVLFGFDGNELGDIHCFDLASEQWKAVETTGDVPAARSVFPAVSYGKYIV 235
Query: 409 VFGG---------LNNDTIFSSLHVLDTDTLQWKELLINGE 440
++GG + + ++ LDT+TL W+ ++ E
Sbjct: 236 IYGGEEEPHELMHMGAGKMSGEVYQLDTETLVWERIVCGNE 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,513,607
Number of Sequences: 539616
Number of extensions: 18121754
Number of successful extensions: 38851
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 303
Number of HSP's that attempted gapping in prelim test: 36894
Number of HSP's gapped (non-prelim): 1129
length of query: 1057
length of database: 191,569,459
effective HSP length: 128
effective length of query: 929
effective length of database: 122,498,611
effective search space: 113801209619
effective search space used: 113801209619
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)