Query 036185
Match_columns 1057
No_of_seqs 859 out of 4996
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 17:31:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036185.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036185hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2it2_A UPF0130 protein PH1069; 100.0 5.6E-61 1.9E-65 489.9 20.2 188 39-238 9-198 (200)
2 2qg3_A UPF0130 protein AF_2059 100.0 9E-61 3.1E-65 487.9 19.7 190 35-238 9-199 (208)
3 1tlj_A Hypothetical UPF0130 pr 100.0 3.4E-60 1.2E-64 487.9 19.7 188 40-239 5-195 (213)
4 2dvk_A UPF0130 protein APE0816 100.0 2.7E-58 9.1E-63 464.1 20.7 181 47-240 3-186 (188)
5 3k6r_A Putative transferase PH 100.0 1.6E-48 5.5E-53 426.9 29.4 270 772-1054 8-277 (278)
6 2yx1_A Hypothetical protein MJ 100.0 7.9E-40 2.7E-44 372.0 33.7 331 653-1054 2-335 (336)
7 1zgk_A Kelch-like ECH-associat 100.0 7.7E-39 2.6E-43 359.8 32.8 286 283-595 11-299 (308)
8 2xn4_A Kelch-like protein 2; s 100.0 4.9E-37 1.7E-41 343.6 37.5 265 303-590 17-283 (302)
9 3ii7_A Kelch-like protein 7; p 100.0 2.8E-37 9.7E-42 346.2 34.6 275 302-602 12-291 (306)
10 2vpj_A Kelch-like protein 12; 100.0 1.2E-36 4E-41 340.2 34.1 268 303-591 16-286 (301)
11 2xn4_A Kelch-like protein 2; s 100.0 2.4E-36 8.3E-41 338.0 35.3 262 269-557 39-302 (302)
12 4asc_A Kelch repeat and BTB do 100.0 2.8E-37 9.6E-42 348.1 25.9 259 284-563 33-306 (315)
13 3ii7_A Kelch-like protein 7; p 100.0 3.4E-36 1.2E-40 337.5 33.1 259 268-554 32-294 (306)
14 2zwa_A Leucine carboxyl methyl 100.0 6.2E-37 2.1E-41 381.3 29.9 284 281-582 383-693 (695)
15 1zgk_A Kelch-like ECH-associat 100.0 6E-36 2.1E-40 336.2 33.7 259 269-552 48-307 (308)
16 2woz_A Kelch repeat and BTB do 100.0 3.1E-36 1.1E-40 339.9 27.5 269 268-561 32-314 (318)
17 2vpj_A Kelch-like protein 12; 100.0 2.4E-35 8.2E-40 329.5 33.8 258 269-554 40-300 (301)
18 2uvk_A YJHT; unknown function, 100.0 2.2E-35 7.5E-40 338.3 31.6 283 281-589 4-348 (357)
19 4asc_A Kelch repeat and BTB do 100.0 2E-35 6.7E-40 332.9 30.0 265 302-589 5-283 (315)
20 2woz_A Kelch repeat and BTB do 100.0 2.5E-34 8.6E-39 324.4 31.7 264 303-589 17-293 (318)
21 2frn_A Hypothetical protein PH 100.0 2.2E-34 7.5E-39 318.7 25.1 260 783-1054 18-277 (278)
22 2uvk_A YJHT; unknown function, 100.0 2.1E-31 7.3E-36 305.2 24.3 240 285-537 54-350 (357)
23 3a27_A TYW2, uncharacterized p 100.0 2.1E-30 7.3E-35 285.7 25.8 248 791-1055 24-272 (272)
24 2zwa_A Leucine carboxyl methyl 100.0 5.6E-28 1.9E-32 300.7 27.5 238 339-588 384-640 (695)
25 1k3i_A Galactose oxidase precu 100.0 5.2E-27 1.8E-31 291.1 27.5 276 264-564 170-531 (656)
26 4dmg_A Putative uncharacterize 99.9 4.7E-23 1.6E-27 237.4 21.3 222 793-1027 109-352 (393)
27 1k3i_A Galactose oxidase precu 99.9 5.5E-23 1.9E-27 254.9 22.8 264 322-600 168-514 (656)
28 2b78_A Hypothetical protein SM 99.9 2.3E-21 7.9E-26 223.9 24.2 242 769-1025 77-355 (385)
29 3c0k_A UPF0064 protein YCCW; P 99.9 1.8E-21 6.1E-26 226.2 23.4 228 787-1027 111-365 (396)
30 2as0_A Hypothetical protein PH 99.9 2.6E-20 8.9E-25 216.4 23.3 228 787-1026 108-360 (396)
31 1wxx_A TT1595, hypothetical pr 99.8 5.6E-20 1.9E-24 212.5 20.1 236 787-1047 104-364 (382)
32 2igt_A SAM dependent methyltra 99.8 3.3E-19 1.1E-23 201.3 21.4 214 794-1027 55-299 (332)
33 3v97_A Ribosomal RNA large sub 99.8 3.6E-19 1.2E-23 219.7 20.1 226 769-1001 402-661 (703)
34 3axs_A Probable N(2),N(2)-dime 99.7 4.6E-17 1.6E-21 186.3 12.7 137 860-997 2-158 (392)
35 3bt7_A TRNA (uracil-5-)-methyl 99.7 4.5E-16 1.5E-20 178.8 18.2 177 849-1046 161-360 (369)
36 2jjq_A Uncharacterized RNA met 99.6 1.5E-14 5.1E-19 168.5 18.1 213 767-1000 164-390 (425)
37 2dul_A N(2),N(2)-dimethylguano 99.6 7.7E-15 2.6E-19 168.1 13.3 135 860-997 4-164 (378)
38 1uwv_A 23S rRNA (uracil-5-)-me 99.5 1.3E-12 4.3E-17 153.2 24.3 245 766-1047 168-424 (433)
39 3lpm_A Putative methyltransfer 99.4 5.4E-12 1.8E-16 137.5 16.7 129 895-1040 49-205 (259)
40 3p9n_A Possible methyltransfer 99.3 3.9E-12 1.3E-16 131.6 13.0 130 866-1001 12-157 (189)
41 3evz_A Methyltransferase; NYSG 99.3 1.9E-11 6.6E-16 130.4 18.0 133 880-1025 40-199 (230)
42 3njr_A Precorrin-6Y methylase; 99.3 3.2E-11 1.1E-15 126.5 18.0 120 893-1025 53-173 (204)
43 3e05_A Precorrin-6Y C5,15-meth 99.3 3.5E-11 1.2E-15 126.0 17.8 132 893-1037 38-171 (204)
44 3kr9_A SAM-dependent methyltra 99.3 9.8E-12 3.4E-16 131.3 13.2 126 889-1026 9-137 (225)
45 3lec_A NADB-rossmann superfami 99.3 2E-11 6.7E-16 129.2 14.1 130 885-1026 10-143 (230)
46 3mti_A RRNA methylase; SAM-dep 99.3 4.4E-11 1.5E-15 123.0 15.3 108 889-1001 16-139 (185)
47 3gnl_A Uncharacterized protein 99.3 2.4E-11 8.1E-16 129.6 13.1 130 885-1026 10-143 (244)
48 3eey_A Putative rRNA methylase 99.2 8.1E-11 2.8E-15 122.3 16.2 110 890-1001 17-143 (197)
49 2ift_A Putative methylase HI07 99.2 1.8E-11 6.2E-16 128.1 11.1 104 895-1001 53-167 (201)
50 2fpo_A Methylase YHHF; structu 99.2 2.7E-11 9.1E-16 126.9 11.4 103 895-1001 54-164 (202)
51 2b3t_A Protein methyltransfera 99.2 1E-10 3.4E-15 128.7 16.4 161 865-1046 78-271 (276)
52 1nv8_A HEMK protein; class I a 99.2 7.4E-11 2.5E-15 130.2 15.1 127 865-997 91-249 (284)
53 3hm2_A Precorrin-6Y C5,15-meth 99.2 2.5E-10 8.6E-15 116.2 17.7 122 893-1025 23-146 (178)
54 3mb5_A SAM-dependent methyltra 99.2 7.8E-11 2.7E-15 127.7 14.7 120 893-1023 91-211 (255)
55 2nxc_A L11 mtase, ribosomal pr 99.2 1.1E-10 3.7E-15 126.8 15.0 147 865-1025 87-237 (254)
56 1l3i_A Precorrin-6Y methyltran 99.2 1.8E-10 6.3E-15 118.3 15.9 135 893-1041 31-167 (192)
57 2yxd_A Probable cobalt-precorr 99.2 2.7E-10 9.1E-15 116.2 16.6 120 893-1027 33-152 (183)
58 1dus_A MJ0882; hypothetical pr 99.2 2.1E-10 7.3E-15 118.0 15.8 133 865-1001 19-161 (194)
59 1yzh_A TRNA (guanine-N(7)-)-me 99.2 2.1E-10 7.1E-15 121.1 15.4 120 894-1025 40-175 (214)
60 2esr_A Methyltransferase; stru 99.2 5.4E-11 1.9E-15 121.4 10.2 107 893-1002 29-143 (177)
61 2fhp_A Methylase, putative; al 99.2 4.1E-11 1.4E-15 123.1 9.2 106 894-1002 43-159 (187)
62 1xdz_A Methyltransferase GIDB; 99.2 1.5E-10 5E-15 124.6 13.9 123 894-1025 69-195 (240)
63 1o54_A SAM-dependent O-methylt 99.2 2E-10 6.8E-15 126.4 15.0 106 893-1000 110-216 (277)
64 4dcm_A Ribosomal RNA large sub 99.2 2.5E-10 8.4E-15 130.9 16.0 135 864-1002 190-339 (375)
65 3ajd_A Putative methyltransfer 99.2 1.4E-10 4.9E-15 127.4 13.1 107 893-1002 81-216 (274)
66 3grz_A L11 mtase, ribosomal pr 99.2 2.6E-10 9.1E-15 119.2 14.4 146 866-1025 28-178 (205)
67 3g89_A Ribosomal RNA small sub 99.1 2.1E-10 7.3E-15 124.1 14.0 123 894-1025 79-205 (249)
68 2ozv_A Hypothetical protein AT 99.1 2E-10 6.8E-15 125.2 13.9 102 894-997 35-170 (260)
69 1fbn_A MJ fibrillarin homologu 99.1 4.3E-10 1.5E-14 120.1 15.7 99 893-996 72-177 (230)
70 3m4x_A NOL1/NOP2/SUN family pr 99.1 1.5E-10 5.1E-15 135.1 13.1 123 892-1023 102-254 (456)
71 4df3_A Fibrillarin-like rRNA/T 99.1 3.3E-10 1.1E-14 120.3 13.6 144 893-1048 75-227 (233)
72 1yb2_A Hypothetical protein TA 99.1 1.9E-10 6.5E-15 126.4 12.1 121 893-1025 108-230 (275)
73 1wy7_A Hypothetical protein PH 99.1 1.4E-09 4.8E-14 113.8 18.2 115 894-1026 48-169 (207)
74 1ixk_A Methyltransferase; open 99.1 4.6E-10 1.6E-14 125.8 15.4 108 892-1002 115-251 (315)
75 2fca_A TRNA (guanine-N(7)-)-me 99.1 7.6E-10 2.6E-14 116.8 15.8 103 894-998 37-154 (213)
76 3m6w_A RRNA methylase; rRNA me 99.1 2.9E-10 9.9E-15 132.8 12.6 107 892-1002 98-234 (464)
77 2ipx_A RRNA 2'-O-methyltransfe 99.1 5.5E-10 1.9E-14 119.5 13.9 102 893-999 75-184 (233)
78 1ws6_A Methyltransferase; stru 99.1 1.9E-10 6.6E-15 116.1 9.6 127 866-1001 11-151 (171)
79 3dmg_A Probable ribosomal RNA 99.1 2.4E-10 8.3E-15 131.1 11.0 102 895-1002 233-345 (381)
80 3tma_A Methyltransferase; thum 99.1 7.8E-10 2.7E-14 126.2 15.2 104 893-999 201-319 (354)
81 2pwy_A TRNA (adenine-N(1)-)-me 99.1 9.6E-10 3.3E-14 119.1 15.1 105 893-1000 94-201 (258)
82 3q87_B N6 adenine specific DNA 99.1 2.1E-09 7.3E-14 109.1 16.2 108 894-1026 22-143 (170)
83 3dxy_A TRNA (guanine-N(7)-)-me 99.1 5E-10 1.7E-14 118.6 12.0 104 895-1000 34-153 (218)
84 1g8a_A Fibrillarin-like PRE-rR 99.1 1.2E-09 3.9E-14 116.3 14.7 99 893-996 71-177 (227)
85 2frx_A Hypothetical protein YE 99.0 9.9E-10 3.4E-14 129.5 14.8 105 895-1002 117-251 (479)
86 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.8E-14 118.2 13.8 103 893-998 47-174 (246)
87 2qm3_A Predicted methyltransfe 99.0 2.4E-09 8.1E-14 123.0 17.3 123 894-1026 171-303 (373)
88 3ntv_A MW1564 protein; rossman 99.0 1.4E-09 4.9E-14 116.2 14.3 106 893-999 69-178 (232)
89 4dzr_A Protein-(glutamine-N5) 99.0 1.1E-10 3.7E-15 122.5 5.3 78 894-974 29-111 (215)
90 4hc4_A Protein arginine N-meth 99.0 5.4E-10 1.8E-14 127.2 11.0 98 894-994 82-186 (376)
91 3tfw_A Putative O-methyltransf 99.0 2.1E-09 7.1E-14 116.3 15.1 106 893-1000 61-173 (248)
92 3hem_A Cyclopropane-fatty-acyl 99.0 2.7E-09 9.2E-14 118.8 16.0 106 893-1002 70-188 (302)
93 3duw_A OMT, O-methyltransferas 99.0 2.1E-09 7.2E-14 113.9 14.4 107 893-1000 56-170 (223)
94 3k0b_A Predicted N6-adenine-sp 99.0 1.9E-09 6.4E-14 124.1 14.9 113 862-975 155-318 (393)
95 1nt2_A Fibrillarin-like PRE-rR 99.0 3.2E-09 1.1E-13 111.8 15.3 101 893-997 55-161 (210)
96 2yvl_A TRMI protein, hypotheti 99.0 2.1E-09 7.1E-14 115.7 14.2 104 893-1000 89-193 (248)
97 2b9e_A NOL1/NOP2/SUN domain fa 99.0 3.6E-09 1.2E-13 117.8 15.8 81 892-974 99-184 (309)
98 3tr6_A O-methyltransferase; ce 99.0 7.8E-10 2.7E-14 117.4 10.0 107 893-1000 62-177 (225)
99 3ldu_A Putative methylase; str 99.0 3.1E-09 1.1E-13 122.1 15.8 113 862-975 149-312 (385)
100 3dr5_A Putative O-methyltransf 99.0 1.8E-09 6.1E-14 114.6 12.5 103 896-999 57-165 (221)
101 3fpf_A Mtnas, putative unchara 99.0 2.9E-09 9.8E-14 116.6 14.2 105 891-998 118-223 (298)
102 3kkz_A Uncharacterized protein 99.0 6.5E-09 2.2E-13 113.4 17.0 131 893-1025 44-189 (267)
103 4gek_A TRNA (CMO5U34)-methyltr 99.0 5E-09 1.7E-13 114.0 15.7 107 893-1001 68-182 (261)
104 2h00_A Methyltransferase 10 do 99.0 8.9E-09 3E-13 111.5 17.5 80 895-975 65-151 (254)
105 3u81_A Catechol O-methyltransf 99.0 1.6E-09 5.6E-14 114.8 11.4 108 894-1002 57-175 (221)
106 1inl_A Spermidine synthase; be 99.0 3.4E-09 1.2E-13 117.6 14.2 105 894-1000 89-208 (296)
107 1jsx_A Glucose-inhibited divis 99.0 1.4E-09 4.9E-14 113.7 10.5 103 895-999 65-167 (207)
108 2r6z_A UPF0341 protein in RSP 99.0 3.2E-10 1.1E-14 123.1 5.3 79 894-975 82-172 (258)
109 3ldg_A Putative uncharacterize 99.0 5.2E-09 1.8E-13 119.9 15.6 105 893-998 192-344 (384)
110 1o9g_A RRNA methyltransferase; 99.0 7.3E-10 2.5E-14 119.8 7.8 104 895-1000 51-217 (250)
111 3f4k_A Putative methyltransfer 98.9 1.3E-08 4.4E-13 110.1 17.4 131 893-1025 44-189 (257)
112 1ne2_A Hypothetical protein TA 98.9 1E-08 3.4E-13 106.7 15.7 83 894-986 50-139 (200)
113 3tm4_A TRNA (guanine N2-)-meth 98.9 8E-09 2.7E-13 118.5 15.9 82 893-975 215-297 (373)
114 1sui_A Caffeoyl-COA O-methyltr 98.9 3.8E-09 1.3E-13 114.1 12.2 105 893-998 77-191 (247)
115 3ocj_A Putative exported prote 98.9 2.2E-09 7.7E-14 119.6 10.6 108 892-1000 115-230 (305)
116 2avd_A Catechol-O-methyltransf 98.9 2.8E-09 9.5E-14 113.4 10.8 105 893-999 67-181 (229)
117 3uwp_A Histone-lysine N-methyl 98.9 1.9E-09 6.4E-14 122.1 9.8 107 893-1001 171-292 (438)
118 3vc1_A Geranyl diphosphate 2-C 98.9 1.2E-08 4.2E-13 114.0 16.4 131 893-1025 115-262 (312)
119 3id6_C Fibrillarin-like rRNA/T 98.9 5.9E-09 2E-13 110.9 13.0 100 893-996 74-180 (232)
120 1i9g_A Hypothetical protein RV 98.9 7.1E-09 2.4E-13 113.9 14.1 106 893-1000 97-206 (280)
121 3r3h_A O-methyltransferase, SA 98.9 7.4E-10 2.5E-14 119.3 5.8 106 893-999 58-172 (242)
122 2yxl_A PH0851 protein, 450AA l 98.9 8.4E-09 2.9E-13 121.3 15.3 107 893-1002 257-394 (450)
123 2b25_A Hypothetical protein; s 98.9 9.6E-09 3.3E-13 116.2 15.1 105 893-999 103-221 (336)
124 1kpg_A CFA synthase;, cyclopro 98.9 1.6E-08 5.4E-13 111.5 16.5 106 893-1002 62-173 (287)
125 2o07_A Spermidine synthase; st 98.9 9.3E-09 3.2E-13 114.4 14.6 145 894-1048 94-252 (304)
126 3jwh_A HEN1; methyltransferase 98.9 8.3E-09 2.8E-13 108.8 13.5 132 894-1026 28-186 (217)
127 3orh_A Guanidinoacetate N-meth 98.9 3.2E-09 1.1E-13 113.8 10.4 130 893-1026 58-204 (236)
128 1iy9_A Spermidine synthase; ro 98.9 4.1E-09 1.4E-13 115.7 11.4 105 894-1000 74-192 (275)
129 3dh0_A SAM dependent methyltra 98.9 2.9E-08 9.8E-13 104.6 17.4 131 893-1025 35-174 (219)
130 3dlc_A Putative S-adenosyl-L-m 98.9 2.5E-08 8.7E-13 104.5 16.8 127 897-1025 45-196 (219)
131 3c3y_A Pfomt, O-methyltransfer 98.9 5.9E-09 2E-13 111.9 11.9 105 893-998 68-182 (237)
132 3jwg_A HEN1, methyltransferase 98.9 1.1E-08 3.9E-13 107.9 13.6 132 894-1026 28-186 (219)
133 3r0q_C Probable protein argini 98.9 3.6E-09 1.2E-13 121.5 10.5 103 893-998 61-170 (376)
134 1zx0_A Guanidinoacetate N-meth 98.9 7.4E-09 2.5E-13 110.8 12.2 130 893-1026 58-204 (236)
135 3c3p_A Methyltransferase; NP_9 98.9 3.1E-09 1.1E-13 111.6 9.0 104 894-999 55-162 (210)
136 2gpy_A O-methyltransferase; st 98.9 4.7E-09 1.6E-13 112.1 10.4 106 893-999 52-162 (233)
137 3gdh_A Trimethylguanosine synt 98.9 2.3E-09 7.8E-14 115.1 7.9 99 894-996 77-180 (241)
138 1nkv_A Hypothetical protein YJ 98.9 8.9E-09 3E-13 111.3 12.3 131 893-1025 34-180 (256)
139 3adn_A Spermidine synthase; am 98.9 9E-09 3.1E-13 113.9 12.5 105 894-1000 82-201 (294)
140 3ckk_A TRNA (guanine-N(7)-)-me 98.9 8.9E-09 3E-13 110.3 11.9 103 894-999 45-170 (235)
141 1sqg_A SUN protein, FMU protei 98.9 9.2E-09 3.1E-13 120.3 13.0 106 893-1002 244-379 (429)
142 2pt6_A Spermidine synthase; tr 98.9 7.6E-09 2.6E-13 116.1 11.7 106 894-1000 115-233 (321)
143 4htf_A S-adenosylmethionine-de 98.9 1.5E-08 5.3E-13 111.5 14.0 104 894-1000 67-176 (285)
144 2fyt_A Protein arginine N-meth 98.9 1E-08 3.5E-13 116.1 12.8 99 893-994 62-168 (340)
145 3e23_A Uncharacterized protein 98.8 2.3E-08 7.8E-13 104.8 14.6 151 887-1051 35-201 (211)
146 3ll7_A Putative methyltransfer 98.8 5.9E-09 2E-13 119.5 10.5 105 893-1002 91-213 (410)
147 3q7e_A Protein arginine N-meth 98.8 7.5E-09 2.5E-13 117.7 11.2 99 893-994 64-170 (349)
148 2ex4_A Adrenal gland protein A 98.8 1.6E-08 5.6E-13 108.4 13.3 143 895-1044 79-233 (241)
149 3cbg_A O-methyltransferase; cy 98.8 5.3E-09 1.8E-13 111.8 9.2 106 894-1000 71-185 (232)
150 3lbf_A Protein-L-isoaspartate 98.8 1.2E-08 4.1E-13 106.9 11.6 101 893-999 75-176 (210)
151 3sm3_A SAM-dependent methyltra 98.8 5.5E-08 1.9E-12 103.3 16.6 108 890-1000 25-144 (235)
152 3lcc_A Putative methyl chlorid 98.8 5.3E-09 1.8E-13 111.7 8.7 128 895-1025 66-200 (235)
153 3bwc_A Spermidine synthase; SA 98.8 5.6E-08 1.9E-12 108.2 17.2 146 894-1048 94-254 (304)
154 1xj5_A Spermidine synthase 1; 98.8 5.4E-08 1.8E-12 109.5 16.9 106 894-1000 119-238 (334)
155 3fzg_A 16S rRNA methylase; met 98.8 7.1E-09 2.4E-13 105.2 8.5 103 892-997 46-152 (200)
156 2fk8_A Methoxy mycolic acid sy 98.8 4.9E-08 1.7E-12 109.3 16.2 106 893-1002 88-199 (318)
157 3gu3_A Methyltransferase; alph 98.8 2E-08 7E-13 110.6 12.8 104 893-999 20-128 (284)
158 3bzb_A Uncharacterized protein 98.8 2.1E-08 7.1E-13 110.5 12.7 128 894-1026 78-231 (281)
159 3bus_A REBM, methyltransferase 98.8 5.3E-08 1.8E-12 106.3 15.8 130 894-1025 60-209 (273)
160 3m70_A Tellurite resistance pr 98.8 1.5E-08 5E-13 111.8 11.3 100 894-998 119-224 (286)
161 1mjf_A Spermidine synthase; sp 98.8 1.2E-08 4.1E-13 112.3 10.3 103 894-999 74-195 (281)
162 2hnk_A SAM-dependent O-methylt 98.8 1.2E-08 4.3E-13 109.3 10.0 105 893-998 58-182 (239)
163 1ve3_A Hypothetical protein PH 98.8 2.5E-08 8.6E-13 105.5 11.7 104 891-999 34-144 (227)
164 1dl5_A Protein-L-isoaspartate 98.8 4.8E-08 1.7E-12 109.5 13.9 104 893-1000 73-178 (317)
165 3mgg_A Methyltransferase; NYSG 98.7 1.1E-07 3.7E-12 104.0 16.4 104 893-998 35-143 (276)
166 1g6q_1 HnRNP arginine N-methyl 98.7 3.1E-08 1.1E-12 111.6 12.0 99 893-994 36-142 (328)
167 3g5l_A Putative S-adenosylmeth 98.7 6.8E-08 2.3E-12 104.2 14.2 106 887-998 34-146 (253)
168 2y1w_A Histone-arginine methyl 98.7 1.7E-08 5.9E-13 114.6 9.9 100 894-996 49-154 (348)
169 3g2m_A PCZA361.24; SAM-depende 98.7 3.5E-08 1.2E-12 109.5 12.1 117 882-1001 68-194 (299)
170 3hnr_A Probable methyltransfer 98.7 9.2E-08 3.1E-12 100.7 14.7 98 894-999 44-147 (220)
171 3b3j_A Histone-arginine methyl 98.7 1.1E-08 3.8E-13 120.9 8.2 99 894-995 157-261 (480)
172 4fsd_A Arsenic methyltransfera 98.7 6.8E-08 2.3E-12 111.2 14.5 132 893-1025 81-244 (383)
173 2pjd_A Ribosomal RNA small sub 98.7 4.7E-08 1.6E-12 110.9 12.9 131 865-1002 165-308 (343)
174 3dtn_A Putative methyltransfer 98.7 5.7E-08 1.9E-12 103.5 12.7 105 893-1001 42-152 (234)
175 3ou2_A SAM-dependent methyltra 98.7 1E-07 3.5E-12 100.0 14.5 101 892-1000 43-149 (218)
176 2b2c_A Spermidine synthase; be 98.7 2.5E-08 8.5E-13 111.3 10.0 104 894-999 107-224 (314)
177 3v97_A Ribosomal RNA large sub 98.7 7.3E-08 2.5E-12 119.0 14.7 81 894-975 189-314 (703)
178 3g07_A 7SK snRNA methylphospha 98.7 1.6E-08 5.6E-13 111.9 8.1 103 894-997 45-220 (292)
179 4fzv_A Putative methyltransfer 98.7 6.5E-08 2.2E-12 109.3 13.0 111 892-1004 145-291 (359)
180 1xxl_A YCGJ protein; structura 98.7 8.4E-08 2.9E-12 102.8 13.3 104 893-1000 19-127 (239)
181 2f8l_A Hypothetical protein LM 98.7 2E-08 6.8E-13 114.0 8.8 101 894-998 129-257 (344)
182 1u2z_A Histone-lysine N-methyl 98.7 2.9E-08 1E-12 114.8 10.2 105 893-998 240-360 (433)
183 1vl5_A Unknown conserved prote 98.7 1.3E-07 4.4E-12 102.6 14.7 104 893-1000 35-143 (260)
184 1ri5_A MRNA capping enzyme; me 98.7 5.5E-08 1.9E-12 107.4 11.9 107 892-1000 61-177 (298)
185 3bkx_A SAM-dependent methyltra 98.7 1.6E-07 5.5E-12 102.5 15.4 107 893-1000 41-162 (275)
186 3m33_A Uncharacterized protein 98.7 1E-07 3.5E-12 101.2 13.3 113 892-1025 45-160 (226)
187 2pxx_A Uncharacterized protein 98.7 5.6E-08 1.9E-12 101.7 11.2 108 888-1000 35-162 (215)
188 2xvm_A Tellurite resistance pr 98.7 5.4E-08 1.8E-12 100.6 10.9 101 894-998 31-137 (199)
189 2qfm_A Spermine synthase; sper 98.7 3.9E-08 1.3E-12 110.2 10.3 105 895-1002 188-319 (364)
190 1uir_A Polyamine aminopropyltr 98.7 7.2E-08 2.4E-12 107.9 12.3 106 894-1000 76-198 (314)
191 2pbf_A Protein-L-isoaspartate 98.7 5.8E-08 2E-12 103.0 10.8 104 893-999 78-195 (227)
192 2o57_A Putative sarcosine dime 98.7 7.7E-08 2.6E-12 106.5 12.0 131 893-1025 80-227 (297)
193 2oyr_A UPF0341 protein YHIQ; a 98.7 6.9E-09 2.4E-13 112.1 3.3 92 894-988 85-192 (258)
194 3ujc_A Phosphoethanolamine N-m 98.7 8.9E-08 3.1E-12 103.8 11.9 128 893-1025 53-199 (266)
195 3cgg_A SAM-dependent methyltra 98.6 1.6E-07 5.5E-12 96.3 13.1 121 889-1025 40-168 (195)
196 3l8d_A Methyltransferase; stru 98.6 1.2E-07 3.9E-12 101.5 12.4 131 888-1025 46-193 (242)
197 1i1n_A Protein-L-isoaspartate 98.6 5.3E-08 1.8E-12 103.2 9.5 105 893-1000 75-185 (226)
198 2kw5_A SLR1183 protein; struct 98.6 2.4E-07 8.2E-12 96.2 14.3 107 888-1001 23-135 (202)
199 3g5t_A Trans-aconitate 3-methy 98.6 9.2E-08 3.2E-12 106.1 11.7 105 894-999 35-151 (299)
200 3lcv_B Sisomicin-gentamicin re 98.6 1.7E-07 5.9E-12 99.4 12.8 131 890-1026 127-266 (281)
201 2a14_A Indolethylamine N-methy 98.6 4.8E-08 1.7E-12 106.4 9.0 130 894-1025 54-231 (263)
202 3ofk_A Nodulation protein S; N 98.6 5.7E-08 1.9E-12 102.1 9.2 100 894-999 50-156 (216)
203 1jg1_A PIMT;, protein-L-isoasp 98.6 7E-08 2.4E-12 103.1 10.0 103 893-1000 89-192 (235)
204 2oo3_A Protein involved in cat 98.6 3.3E-08 1.1E-12 106.5 7.3 100 895-1000 91-202 (283)
205 2p8j_A S-adenosylmethionine-de 98.6 7.1E-08 2.4E-12 100.7 9.7 108 889-1000 17-131 (209)
206 3d2l_A SAM-dependent methyltra 98.6 1E-07 3.5E-12 101.9 11.1 103 888-996 26-136 (243)
207 2yxe_A Protein-L-isoaspartate 98.6 1.2E-07 4E-12 99.6 11.3 104 893-1000 75-180 (215)
208 2h1r_A Dimethyladenosine trans 98.6 7.2E-08 2.5E-12 107.1 10.0 78 893-975 40-117 (299)
209 3i9f_A Putative type 11 methyl 98.6 2.9E-07 9.9E-12 92.7 13.7 98 893-1001 15-116 (170)
210 2okc_A Type I restriction enzy 98.6 3.7E-08 1.3E-12 115.7 8.0 104 893-998 169-308 (445)
211 3mq2_A 16S rRNA methyltransfer 98.6 1.5E-07 5.3E-12 99.0 11.8 130 893-1025 25-177 (218)
212 2p7i_A Hypothetical protein; p 98.6 1.9E-07 6.4E-12 99.9 12.6 100 893-1000 40-144 (250)
213 1xtp_A LMAJ004091AAA; SGPP, st 98.6 8.3E-08 2.8E-12 103.4 9.9 127 894-1025 92-231 (254)
214 1qzz_A RDMB, aclacinomycin-10- 98.6 4.9E-07 1.7E-11 103.6 16.8 102 894-998 181-288 (374)
215 1r18_A Protein-L-isoaspartate( 98.6 4.8E-08 1.6E-12 103.8 7.7 103 893-999 82-196 (227)
216 3gjy_A Spermidine synthase; AP 98.6 1.5E-07 5.1E-12 104.3 11.5 101 898-1000 92-203 (317)
217 2i7c_A Spermidine synthase; tr 98.6 1.8E-07 6E-12 103.1 11.8 105 894-1000 77-195 (283)
218 3dou_A Ribosomal RNA large sub 98.6 3.6E-07 1.2E-11 94.5 13.4 94 893-1001 23-143 (191)
219 3h2b_A SAM-dependent methyltra 98.6 3.2E-07 1.1E-11 95.3 12.8 121 896-1025 42-175 (203)
220 3p2e_A 16S rRNA methylase; met 98.6 4.8E-08 1.6E-12 103.9 6.6 100 893-995 22-137 (225)
221 1wzn_A SAM-dependent methyltra 98.6 1.7E-07 5.9E-12 100.9 11.1 98 894-996 40-144 (252)
222 2r3s_A Uncharacterized protein 98.5 5.3E-07 1.8E-11 101.5 14.9 130 894-1025 164-316 (335)
223 3dp7_A SAM-dependent methyltra 98.5 5E-07 1.7E-11 103.2 14.7 105 894-1001 178-291 (363)
224 3gru_A Dimethyladenosine trans 98.5 9.6E-08 3.3E-12 105.3 8.1 107 861-975 16-125 (295)
225 2cmg_A Spermidine synthase; tr 98.5 5.8E-08 2E-12 105.5 6.3 100 894-999 71-173 (262)
226 4hg2_A Methyltransferase type 98.5 2.2E-07 7.5E-12 100.7 10.8 102 889-1000 33-138 (257)
227 1vbf_A 231AA long hypothetical 98.5 2.2E-07 7.5E-12 98.8 10.5 100 893-1000 68-168 (231)
228 3i53_A O-methyltransferase; CO 98.5 1.5E-06 5E-11 98.0 17.7 128 895-1025 169-314 (332)
229 3pfg_A N-methyltransferase; N, 98.5 1.7E-07 6E-12 101.7 9.6 96 893-997 48-151 (263)
230 1pjz_A Thiopurine S-methyltran 98.5 5E-08 1.7E-12 101.9 4.9 103 893-998 20-143 (203)
231 3hp7_A Hemolysin, putative; st 98.5 1.2E-06 4E-11 96.1 15.7 125 894-1026 84-226 (291)
232 3iv6_A Putative Zn-dependent a 98.5 2E-07 6.9E-12 100.9 9.4 102 893-1000 43-151 (261)
233 3gwz_A MMCR; methyltransferase 98.5 1.8E-06 6.1E-11 98.8 17.8 129 894-1025 201-349 (369)
234 1m6y_A S-adenosyl-methyltransf 98.5 1.4E-07 4.9E-12 104.3 8.2 84 893-979 24-113 (301)
235 1tw3_A COMT, carminomycin 4-O- 98.5 1.4E-06 4.9E-11 99.1 16.8 103 894-999 182-290 (360)
236 2yqz_A Hypothetical protein TT 98.5 3.4E-07 1.2E-11 99.0 11.0 99 893-996 37-140 (263)
237 2gb4_A Thiopurine S-methyltran 98.5 1.4E-07 4.9E-12 102.0 7.7 101 894-997 67-191 (252)
238 3dli_A Methyltransferase; PSI- 98.5 8E-07 2.8E-11 95.0 13.6 120 893-1025 39-177 (240)
239 1y8c_A S-adenosylmethionine-de 98.5 1.9E-07 6.7E-12 99.7 8.7 97 895-996 37-141 (246)
240 1ej0_A FTSJ; methyltransferase 98.5 2.6E-07 8.9E-12 93.0 9.1 97 893-1002 20-141 (180)
241 3thr_A Glycine N-methyltransfe 98.5 4E-07 1.4E-11 100.4 11.4 103 894-999 56-177 (293)
242 2plw_A Ribosomal RNA methyltra 98.5 7.8E-07 2.7E-11 92.2 12.8 95 893-1000 20-157 (201)
243 3ccf_A Cyclopropane-fatty-acyl 98.5 4.6E-07 1.6E-11 99.4 11.2 99 893-1000 55-157 (279)
244 2nyu_A Putative ribosomal RNA 98.5 8.5E-07 2.9E-11 91.5 12.6 98 891-1001 18-149 (196)
245 3lkd_A Type I restriction-modi 98.5 5.8E-07 2E-11 107.3 12.6 80 894-974 220-307 (542)
246 3htx_A HEN1; HEN1, small RNA m 98.4 1.1E-06 3.9E-11 106.5 14.5 118 876-997 699-834 (950)
247 3bkw_A MLL3908 protein, S-aden 98.4 4.2E-07 1.4E-11 97.1 9.9 99 894-998 42-145 (243)
248 2bm8_A Cephalosporin hydroxyla 98.4 4.4E-07 1.5E-11 97.1 9.8 98 894-998 80-188 (236)
249 2gs9_A Hypothetical protein TT 98.4 5.9E-07 2E-11 93.9 10.6 101 891-1002 32-137 (211)
250 3ggd_A SAM-dependent methyltra 98.4 5.6E-07 1.9E-11 96.5 10.4 107 889-1002 50-168 (245)
251 3bgv_A MRNA CAP guanine-N7 met 98.4 6.5E-07 2.2E-11 100.0 10.6 105 894-1000 33-158 (313)
252 2ih2_A Modification methylase 98.4 2.1E-07 7E-12 108.5 6.5 109 877-999 21-166 (421)
253 1zq9_A Probable dimethyladenos 98.4 5.7E-07 2E-11 99.1 9.5 79 893-975 26-104 (285)
254 2p35_A Trans-aconitate 2-methy 98.4 4.1E-07 1.4E-11 98.3 8.0 99 894-999 32-134 (259)
255 2ar0_A M.ecoki, type I restric 98.4 2.5E-07 8.6E-12 110.9 6.9 118 877-998 151-313 (541)
256 2ip2_A Probable phenazine-spec 98.4 2E-06 6.8E-11 96.9 13.1 101 897-1000 169-275 (334)
257 3khk_A Type I restriction-modi 98.4 3.1E-07 1.1E-11 109.8 6.8 116 877-997 227-395 (544)
258 1vlm_A SAM-dependent methyltra 98.3 3.1E-06 1.1E-10 89.1 13.5 117 894-1025 46-181 (219)
259 3e8s_A Putative SAM dependent 98.3 8.7E-07 3E-11 93.3 9.2 97 894-1000 51-155 (227)
260 2vdw_A Vaccinia virus capping 98.3 1.3E-06 4.5E-11 97.0 10.8 102 895-998 48-170 (302)
261 2i62_A Nicotinamide N-methyltr 98.3 1.9E-07 6.6E-12 101.1 3.8 130 894-1025 55-232 (265)
262 1x19_A CRTF-related protein; m 98.3 1.9E-06 6.4E-11 98.2 11.9 105 893-1000 188-298 (359)
263 3tqs_A Ribosomal RNA small sub 98.3 1E-06 3.6E-11 95.1 9.1 87 893-987 27-118 (255)
264 3frh_A 16S rRNA methylase; met 98.3 2.4E-06 8.2E-11 89.9 11.3 98 894-997 104-206 (253)
265 3ege_A Putative methyltransfer 98.3 1.1E-06 3.9E-11 95.2 9.3 102 888-1000 25-133 (261)
266 3opn_A Putative hemolysin; str 98.3 8.3E-07 2.9E-11 94.6 7.8 126 894-1025 36-177 (232)
267 3bxo_A N,N-dimethyltransferase 98.3 1.5E-06 5.1E-11 92.5 9.1 97 893-998 38-142 (239)
268 3mcz_A O-methyltransferase; ad 98.3 2E-06 7E-11 97.6 10.8 128 896-1025 180-332 (352)
269 2avn_A Ubiquinone/menaquinone 98.3 2.3E-06 8E-11 92.7 10.6 98 893-1000 52-155 (260)
270 1p91_A Ribosomal RNA large sub 98.2 2.9E-06 9.9E-11 92.3 10.1 97 894-1000 84-181 (269)
271 4gqb_A Protein arginine N-meth 98.2 1.6E-06 5.6E-11 104.2 8.0 80 895-975 357-440 (637)
272 3cvo_A Methyltransferase-like 98.2 1.1E-05 3.9E-10 83.3 13.3 101 892-997 27-154 (202)
273 1g55_A DNA cytosine methyltran 98.2 3.2E-06 1.1E-10 95.5 9.9 120 897-1028 3-145 (343)
274 3ua3_A Protein arginine N-meth 98.2 1.4E-06 4.9E-11 104.1 7.2 97 896-994 410-531 (745)
275 3s1s_A Restriction endonucleas 98.2 2.1E-06 7.2E-11 104.1 8.1 80 894-974 320-409 (878)
276 3fut_A Dimethyladenosine trans 98.1 1.1E-06 3.9E-11 95.5 4.9 76 893-976 45-122 (271)
277 2qe6_A Uncharacterized protein 98.1 2.3E-05 7.8E-10 85.7 14.9 103 895-1001 77-200 (274)
278 2aot_A HMT, histamine N-methyl 98.1 1.1E-05 3.9E-10 88.8 12.4 132 894-1026 51-215 (292)
279 2g72_A Phenylethanolamine N-me 98.1 1.9E-06 6.7E-11 94.8 6.1 129 895-1025 71-249 (289)
280 3uzu_A Ribosomal RNA small sub 98.1 2.9E-06 9.8E-11 92.9 7.1 105 888-999 33-148 (279)
281 3lst_A CALO1 methyltransferase 98.1 6.9E-06 2.3E-10 93.1 10.5 126 894-1025 183-329 (348)
282 1qam_A ERMC' methyltransferase 98.1 3.8E-06 1.3E-10 90.2 7.8 84 887-976 20-106 (244)
283 2xyq_A Putative 2'-O-methyl tr 98.1 5.2E-06 1.8E-10 91.1 8.9 92 893-1001 61-175 (290)
284 3g7u_A Cytosine-specific methy 98.1 1.2E-05 4.1E-10 91.8 12.0 123 897-1029 3-149 (376)
285 2oxt_A Nucleoside-2'-O-methylt 98.1 2.2E-06 7.6E-11 93.2 5.6 103 892-1000 71-188 (265)
286 3ftd_A Dimethyladenosine trans 98.1 4.3E-06 1.5E-10 90.1 7.6 82 888-976 22-107 (249)
287 2wa2_A Non-structural protein 98.1 1.9E-06 6.5E-11 94.3 4.6 103 893-1001 80-197 (276)
288 2zfu_A Nucleomethylin, cerebra 98.0 1.7E-05 5.7E-10 83.0 10.0 104 893-1025 65-172 (215)
289 2p41_A Type II methyltransfera 98.0 6.6E-06 2.2E-10 91.3 6.4 101 892-1001 79-195 (305)
290 3cc8_A Putative methyltransfer 98.0 8E-06 2.7E-10 86.0 6.8 94 894-998 31-131 (230)
291 2c7p_A Modification methylase 97.9 3.5E-05 1.2E-09 86.2 12.0 124 896-1030 11-151 (327)
292 1yub_A Ermam, rRNA methyltrans 97.9 1.3E-06 4.4E-11 94.0 -0.6 77 893-976 27-105 (245)
293 4azs_A Methyltransferase WBDD; 97.9 2.2E-05 7.4E-10 95.0 9.8 75 893-970 64-141 (569)
294 4a6d_A Hydroxyindole O-methylt 97.9 0.0001 3.6E-09 83.5 14.9 128 894-1025 178-327 (353)
295 1fp1_D Isoliquiritigenin 2'-O- 97.9 5.5E-05 1.9E-09 86.5 12.4 96 894-1000 208-309 (372)
296 3reo_A (ISO)eugenol O-methyltr 97.9 0.00011 3.8E-09 83.8 14.9 96 894-1000 202-303 (368)
297 1qyr_A KSGA, high level kasuga 97.8 6.7E-06 2.3E-10 88.6 3.8 76 893-976 19-102 (252)
298 3o4f_A Spermidine synthase; am 97.8 0.00021 7.2E-09 78.0 14.8 106 894-1001 82-202 (294)
299 3ufb_A Type I restriction-modi 97.8 4.2E-05 1.4E-09 91.3 9.4 97 877-975 199-313 (530)
300 2qy6_A UPF0209 protein YFCK; s 97.7 0.00015 5.2E-09 78.1 12.4 134 865-999 18-215 (257)
301 3ubt_Y Modification methylase 97.7 6.8E-05 2.3E-09 84.2 10.0 123 898-1030 2-141 (331)
302 1af7_A Chemotaxis receptor met 97.7 3.4E-05 1.2E-09 84.1 7.0 100 895-995 105-250 (274)
303 4h0n_A DNMT2; SAH binding, tra 97.7 9.6E-05 3.3E-09 82.8 10.8 120 898-1029 5-146 (333)
304 1fp2_A Isoflavone O-methyltran 97.7 0.00033 1.1E-08 79.3 15.4 122 893-1025 186-334 (352)
305 3qv2_A 5-cytosine DNA methyltr 97.7 0.00012 4.2E-09 81.6 11.3 122 896-1030 10-158 (327)
306 3p9c_A Caffeic acid O-methyltr 97.7 0.00031 1.1E-08 80.0 14.7 96 894-1000 200-301 (364)
307 4e2x_A TCAB9; kijanose, tetron 97.7 2.2E-05 7.6E-10 91.2 4.6 125 894-1025 106-246 (416)
308 3mbr_X Glutamine cyclotransfer 97.7 0.012 4.2E-07 62.4 25.2 196 340-563 17-224 (243)
309 4auk_A Ribosomal RNA large sub 97.6 0.00053 1.8E-08 76.8 14.0 125 893-1028 209-336 (375)
310 3sso_A Methyltransferase; macr 97.5 6.6E-05 2.2E-09 85.0 6.2 96 893-999 214-326 (419)
311 1g60_A Adenine-specific methyl 97.5 0.00012 4.2E-09 79.2 6.9 50 893-944 210-259 (260)
312 1zg3_A Isoflavanone 4'-O-methy 97.5 0.00064 2.2E-08 77.1 13.0 96 894-1000 192-296 (358)
313 1wg8_A Predicted S-adenosylmet 97.3 0.0004 1.4E-08 74.8 8.5 96 880-984 8-109 (285)
314 2zig_A TTHA0409, putative modi 97.3 0.00037 1.3E-08 77.0 8.4 47 894-942 234-280 (297)
315 3me5_A Cytosine-specific methy 97.3 0.00045 1.5E-08 80.8 9.5 125 897-1027 89-255 (482)
316 2k4m_A TR8_protein, UPF0146 pr 97.3 0.00056 1.9E-08 65.9 8.3 91 892-1002 32-126 (153)
317 2qrv_A DNA (cytosine-5)-methyl 97.3 0.0005 1.7E-08 75.5 8.5 72 894-973 14-92 (295)
318 2ld4_A Anamorsin; methyltransf 97.2 0.00012 4E-09 74.0 3.0 112 893-1027 10-130 (176)
319 3giw_A Protein of unknown func 97.2 0.0022 7.5E-08 69.3 13.0 105 896-1002 79-205 (277)
320 3nol_A Glutamine cyclotransfer 97.2 0.038 1.3E-06 59.1 22.2 190 345-563 44-245 (262)
321 3dsm_A Uncharacterized protein 97.2 0.039 1.3E-06 61.1 23.5 229 287-561 44-285 (328)
322 2wk1_A NOVP; transferase, O-me 97.2 0.0012 4.1E-08 71.8 10.2 124 895-1027 106-267 (282)
323 3c6k_A Spermine synthase; sper 97.1 0.0015 5.2E-08 73.4 11.2 105 894-1000 204-334 (381)
324 3mbr_X Glutamine cyclotransfer 97.0 0.094 3.2E-06 55.5 23.0 187 303-525 32-231 (243)
325 3evf_A RNA-directed RNA polyme 97.0 0.0027 9.4E-08 67.9 10.8 104 892-1000 71-187 (277)
326 3p8z_A Mtase, non-structural p 97.0 0.0018 6.3E-08 66.9 9.0 81 892-975 75-156 (267)
327 4dkj_A Cytosine-specific methy 96.9 0.003 1E-07 72.3 11.5 130 898-1030 12-216 (403)
328 3dsm_A Uncharacterized protein 96.9 0.16 5.5E-06 56.1 25.6 190 319-534 16-217 (328)
329 3gcz_A Polyprotein; flavivirus 96.8 0.0011 3.8E-08 71.0 5.9 104 892-1000 87-204 (282)
330 3q7m_A Lipoprotein YFGL, BAMB; 96.8 0.5 1.7E-05 52.8 28.1 198 320-563 153-368 (376)
331 3swr_A DNA (cytosine-5)-methyl 96.7 0.0042 1.4E-07 78.5 11.3 125 897-1030 541-700 (1002)
332 3nol_A Glutamine cyclotransfer 96.7 0.19 6.4E-06 53.8 22.1 178 303-512 54-244 (262)
333 3lkz_A Non-structural protein 96.7 0.0074 2.5E-07 64.6 10.8 77 892-971 91-168 (321)
334 3q7m_A Lipoprotein YFGL, BAMB; 96.6 0.43 1.5E-05 53.3 26.3 211 303-562 55-285 (376)
335 4ft4_B DNA (cytosine-5)-methyl 96.6 0.0075 2.6E-07 75.7 12.1 43 896-939 212-260 (784)
336 2iwa_A Glutamine cyclotransfer 96.5 0.55 1.9E-05 50.4 24.6 201 290-530 24-238 (266)
337 1l0q_A Surface layer protein; 96.5 0.11 3.7E-06 58.2 20.2 186 302-535 2-195 (391)
338 3bws_A Protein LP49; two-domai 96.5 0.17 5.7E-06 57.6 22.0 189 320-535 101-298 (433)
339 2iwa_A Glutamine cyclotransfer 96.5 0.33 1.1E-05 52.1 22.7 191 346-564 23-227 (266)
340 3nok_A Glutaminyl cyclase; bet 96.5 0.16 5.3E-06 54.5 19.6 158 345-533 56-214 (268)
341 3jrp_A Fusion protein of prote 96.4 0.11 3.7E-06 57.4 19.5 189 303-530 24-241 (379)
342 2py6_A Methyltransferase FKBM; 96.4 0.0064 2.2E-07 70.1 8.9 63 893-955 224-291 (409)
343 1p22_A F-BOX/WD-repeat protein 96.4 0.45 1.5E-05 54.4 24.7 211 303-564 144-355 (435)
344 4ery_A WD repeat-containing pr 96.3 0.66 2.2E-05 50.0 24.6 186 302-534 35-228 (312)
345 2ovr_B FBW7, F-BOX/WD repeat p 96.3 0.91 3.1E-05 51.8 26.8 186 304-534 211-396 (445)
346 1boo_A Protein (N-4 cytosine-s 96.2 0.001 3.5E-08 74.3 0.9 65 893-961 250-314 (323)
347 3tka_A Ribosomal RNA small sub 96.2 0.008 2.7E-07 66.2 7.9 99 879-984 42-148 (347)
348 1gxr_A ESG1, transducin-like e 96.2 0.48 1.7E-05 51.1 22.6 188 303-534 110-301 (337)
349 2ovr_B FBW7, F-BOX/WD repeat p 96.0 1.2 4.1E-05 50.8 26.0 211 304-564 171-381 (445)
350 1k8k_C P40, ARP2/3 complex 41 96.0 1.1 3.7E-05 49.2 24.6 147 303-478 21-172 (372)
351 1l0q_A Surface layer protein; 95.9 0.43 1.5E-05 53.2 21.3 188 302-534 44-238 (391)
352 3av4_A DNA (cytosine-5)-methyl 95.9 0.025 8.6E-07 73.3 11.6 126 896-1030 851-1011(1330)
353 3eld_A Methyltransferase; flav 95.9 0.016 5.5E-07 62.4 8.2 103 891-999 77-193 (300)
354 3v9f_A Two-component system se 95.8 0.25 8.7E-06 61.6 20.6 187 320-537 427-619 (781)
355 3nok_A Glutaminyl cyclase; bet 95.7 0.55 1.9E-05 50.2 19.5 147 303-484 66-215 (268)
356 3vgz_A Uncharacterized protein 95.7 2.9 0.0001 45.3 27.7 194 302-535 101-309 (353)
357 2px2_A Genome polyprotein [con 95.7 0.078 2.7E-06 55.9 12.2 99 892-1000 70-186 (269)
358 3vgz_A Uncharacterized protein 95.6 3.3 0.00011 44.9 30.0 204 302-535 53-268 (353)
359 4ery_A WD repeat-containing pr 95.5 1.3 4.6E-05 47.5 22.5 190 303-532 78-271 (312)
360 4a2l_A BT_4663, two-component 95.4 0.77 2.6E-05 57.3 22.8 185 321-537 428-622 (795)
361 1i4w_A Mitochondrial replicati 95.4 0.02 6.8E-07 64.2 7.2 60 895-958 58-117 (353)
362 3jro_A Fusion protein of prote 95.3 0.22 7.6E-06 61.9 17.3 191 302-530 21-239 (753)
363 4aez_A CDC20, WD repeat-contai 95.2 1.3 4.6E-05 49.7 22.0 219 303-565 147-371 (401)
364 2hqs_A Protein TOLB; TOLB, PAL 95.1 0.5 1.7E-05 54.0 18.2 198 303-536 191-394 (415)
365 3jrp_A Fusion protein of prote 95.1 0.27 9.3E-06 54.1 15.5 198 302-537 69-296 (379)
366 1eg2_A Modification methylase 95.1 0.015 5.2E-07 64.5 4.9 54 888-943 234-291 (319)
367 3bws_A Protein LP49; two-domai 95.1 1.2 4E-05 50.4 21.1 195 302-534 134-339 (433)
368 3fm0_A Protein CIAO1; WDR39,SG 95.0 1 3.4E-05 49.7 19.9 181 302-514 28-215 (345)
369 1gxr_A ESG1, transducin-like e 95.0 1.3 4.5E-05 47.5 20.4 150 353-535 108-261 (337)
370 1p22_A F-BOX/WD-repeat protein 95.0 1.1 3.7E-05 51.1 20.5 183 303-530 184-366 (435)
371 1k8k_C P40, ARP2/3 complex 41 94.7 3.7 0.00013 44.8 23.3 196 303-536 65-283 (372)
372 2qc5_A Streptogramin B lactona 94.4 6 0.0002 41.5 24.2 212 302-562 31-248 (300)
373 1kb0_A Quinohemoprotein alcoho 94.3 2.3 8E-05 52.0 22.3 118 303-436 79-208 (677)
374 3vl1_A 26S proteasome regulato 94.2 8.6 0.00029 42.8 25.8 219 302-565 109-356 (420)
375 3zwl_B Eukaryotic translation 94.2 3 0.0001 45.2 21.1 221 303-564 45-280 (369)
376 3dwl_C Actin-related protein 2 94.2 0.27 9.3E-06 54.6 12.5 148 303-480 24-178 (377)
377 4a2l_A BT_4663, two-component 94.1 3.1 0.0001 51.8 23.1 209 321-562 378-604 (795)
378 3hfq_A Uncharacterized protein 94.0 2 6.7E-05 47.0 19.1 192 320-536 18-227 (347)
379 3ow8_A WD repeat-containing pr 94.0 4.4 0.00015 44.0 21.8 186 303-533 93-283 (321)
380 1q7f_A NHL, brain tumor CG1071 94.0 7.2 0.00025 41.0 26.0 221 302-561 41-268 (286)
381 3ow8_A WD repeat-containing pr 93.9 3.2 0.00011 45.2 20.4 149 353-534 91-242 (321)
382 3hfq_A Uncharacterized protein 93.8 2.6 9E-05 45.9 19.7 206 303-536 52-279 (347)
383 2hqs_A Protein TOLB; TOLB, PAL 93.8 2.8 9.5E-05 47.7 20.4 209 320-563 159-373 (415)
384 2ojh_A Uncharacterized protein 93.8 1.4 4.9E-05 45.9 16.9 190 321-536 63-265 (297)
385 3v9f_A Two-component system se 93.7 1.2 4.2E-05 55.3 18.4 179 320-529 469-656 (781)
386 3v7d_B Cell division control p 93.6 12 0.00042 42.3 27.2 216 304-562 175-410 (464)
387 1got_B GT-beta; complex (GTP-b 93.6 4.1 0.00014 44.5 20.7 186 302-532 67-260 (340)
388 3g4e_A Regucalcin; six bladed 93.5 9.5 0.00032 40.7 23.3 229 288-563 14-262 (297)
389 1ri6_A Putative isomerase YBHE 93.4 4.8 0.00016 43.2 20.7 190 321-537 61-272 (343)
390 2vdu_B TRNA (guanine-N(7)-)-me 93.4 6.7 0.00023 44.6 22.9 153 302-484 115-276 (450)
391 1r5m_A SIR4-interacting protei 93.4 2.6 8.9E-05 46.8 19.0 188 303-531 162-363 (425)
392 1r5m_A SIR4-interacting protei 93.2 9.9 0.00034 41.9 23.6 191 302-534 120-324 (425)
393 1got_B GT-beta; complex (GTP-b 93.2 10 0.00035 41.3 23.2 146 353-531 154-303 (340)
394 2ad6_A Methanol dehydrogenase 93.2 5.7 0.0002 47.4 22.4 117 303-436 64-194 (571)
395 4aez_A CDC20, WD repeat-contai 93.1 7.5 0.00026 43.4 22.4 181 321-534 114-298 (401)
396 1pjx_A Dfpase, DIISOPROPYLFLUO 92.9 9.5 0.00033 40.4 21.9 188 320-531 46-258 (314)
397 1ri6_A Putative isomerase YBHE 92.7 7.6 0.00026 41.5 21.0 195 302-534 5-216 (343)
398 2xbg_A YCF48-like protein; pho 92.6 13 0.00044 40.6 22.9 207 322-564 58-270 (327)
399 3u4y_A Uncharacterized protein 92.6 5.7 0.00019 42.6 19.8 191 301-532 9-210 (331)
400 1jmx_B Amine dehydrogenase; ox 92.6 2.4 8.3E-05 45.8 16.8 158 301-484 10-180 (349)
401 2z2n_A Virginiamycin B lyase; 92.5 12 0.00039 39.2 26.3 213 302-562 68-284 (299)
402 2pm7_B Protein transport prote 92.5 2.8 9.6E-05 44.9 16.9 63 354-430 67-133 (297)
403 2z2n_A Virginiamycin B lyase; 92.4 12 0.00041 39.1 27.1 202 320-561 36-242 (299)
404 3mkq_A Coatomer beta'-subunit; 92.3 4.4 0.00015 49.9 20.7 189 302-533 25-221 (814)
405 2hes_X YDR267CP; beta-propelle 92.1 5.7 0.00019 43.2 19.1 157 353-536 118-287 (330)
406 3e5z_A Putative gluconolactona 92.0 14 0.00048 39.1 23.6 205 290-536 31-253 (296)
407 1rwi_B Serine/threonine-protei 92.0 5.7 0.0002 41.2 18.3 204 320-564 46-254 (270)
408 4gqb_B Methylosome protein 50; 92.0 3.5 0.00012 45.5 17.3 149 353-534 138-294 (344)
409 1yiq_A Quinohemoprotein alcoho 92.0 28 0.00095 42.4 27.0 115 303-435 72-200 (689)
410 3vl1_A 26S proteasome regulato 91.8 5.3 0.00018 44.5 18.9 107 353-484 108-217 (420)
411 3ei3_B DNA damage-binding prot 91.8 5.7 0.0002 43.8 19.0 186 303-530 87-283 (383)
412 1sq9_A Antiviral protein SKI8; 91.8 18 0.0006 39.7 24.0 195 304-532 28-270 (397)
413 4g56_B MGC81050 protein; prote 91.8 1.7 5.9E-05 48.2 14.5 175 353-564 150-333 (357)
414 1vyh_C Platelet-activating fac 91.7 9.2 0.00031 43.0 20.9 147 302-484 120-270 (410)
415 3fm0_A Protein CIAO1; WDR39,SG 91.7 1.8 6.2E-05 47.6 14.5 184 353-564 27-215 (345)
416 1q7f_A NHL, brain tumor CG1071 91.6 13 0.00046 38.8 21.0 182 353-564 40-227 (286)
417 2ecf_A Dipeptidyl peptidase IV 91.6 1.8 6.3E-05 52.9 15.7 211 303-536 49-328 (741)
418 2ojh_A Uncharacterized protein 91.5 4.3 0.00015 42.1 16.6 187 318-536 20-213 (297)
419 1kv9_A Type II quinohemoprotei 91.4 26 0.00089 42.5 25.7 115 303-436 68-196 (668)
420 2z3z_A Dipeptidyl aminopeptida 91.4 8.5 0.00029 46.6 21.5 156 369-536 234-398 (706)
421 1sq9_A Antiviral protein SKI8; 91.4 8.6 0.00029 42.3 19.9 204 303-533 82-326 (397)
422 3v7d_B Cell division control p 91.4 22 0.00076 40.1 28.9 215 304-564 134-371 (464)
423 3no2_A Uncharacterized protein 91.3 9.2 0.00031 40.7 19.1 213 302-561 5-230 (276)
424 2z3z_A Dipeptidyl aminopeptida 91.1 6.3 0.00022 47.8 19.9 198 318-531 233-437 (706)
425 4aow_A Guanine nucleotide-bind 91.1 8.6 0.00029 41.1 19.0 188 302-533 98-290 (340)
426 3fvz_A Peptidyl-glycine alpha- 91.0 20 0.00068 38.8 30.4 226 320-565 69-313 (329)
427 3c5m_A Oligogalacturonate lyas 90.9 10 0.00034 41.7 19.7 192 320-537 60-281 (396)
428 3scy_A Hypothetical bacterial 90.6 22 0.00074 38.7 23.2 208 303-537 14-250 (361)
429 4gga_A P55CDC, cell division c 90.5 8.3 0.00028 43.4 19.0 221 302-565 159-386 (420)
430 4a11_B DNA excision repair pro 90.4 3.2 0.00011 45.8 15.0 224 303-565 113-356 (408)
431 2pbi_B Guanine nucleotide-bind 90.3 19 0.00066 39.3 21.3 145 354-531 166-317 (354)
432 1pgu_A Actin interacting prote 90.3 9.6 0.00033 44.7 20.0 110 407-534 175-288 (615)
433 2ynn_A Coatomer subunit beta'; 90.2 6.7 0.00023 42.0 17.0 186 303-532 26-220 (304)
434 3pe7_A Oligogalacturonate lyas 90.2 12 0.00041 41.0 19.6 199 320-537 60-281 (388)
435 3ott_A Two-component system se 90.2 6.6 0.00022 48.4 19.0 186 321-536 393-593 (758)
436 2xdw_A Prolyl endopeptidase; a 90.1 40 0.0014 40.9 26.5 226 320-562 98-354 (710)
437 2qc5_A Streptogramin B lactona 90.1 20 0.00068 37.4 24.4 190 302-536 73-266 (300)
438 2dg1_A DRP35, lactonase; beta 90.1 22 0.00077 38.0 23.2 205 302-536 56-270 (333)
439 3c5m_A Oligogalacturonate lyas 90.0 5.8 0.0002 43.7 16.8 201 319-536 167-391 (396)
440 2aq5_A Coronin-1A; WD40 repeat 90.0 5.5 0.00019 44.4 16.8 202 302-536 94-308 (402)
441 4gqb_B Methylosome protein 50; 90.0 7.9 0.00027 42.6 17.7 181 302-529 139-331 (344)
442 2vdu_B TRNA (guanine-N(7)-)-me 89.9 9.8 0.00034 43.2 19.1 160 354-534 210-398 (450)
443 1vyh_C Platelet-activating fac 89.8 12 0.00042 41.9 19.6 184 302-531 162-371 (410)
444 2aq5_A Coronin-1A; WD40 repeat 89.8 6.2 0.00021 44.0 16.9 158 353-531 93-256 (402)
445 3r24_A NSP16, 2'-O-methyl tran 89.7 0.39 1.3E-05 51.4 6.0 95 893-1002 107-222 (344)
446 2pm7_B Protein transport prote 89.6 6.6 0.00023 41.8 16.3 197 303-536 68-293 (297)
447 3jro_A Fusion protein of prote 89.5 1.2 4.1E-05 55.2 11.5 107 353-480 20-133 (753)
448 3pvc_A TRNA 5-methylaminomethy 89.5 0.46 1.6E-05 58.4 7.6 147 864-1025 15-226 (689)
449 3odt_A Protein DOA1; ubiquitin 89.4 18 0.00061 37.9 19.5 148 353-535 154-302 (313)
450 1w6s_A Methanol dehydrogenase 89.3 14 0.00048 44.3 20.2 118 303-436 64-200 (599)
451 4gga_A P55CDC, cell division c 89.3 18 0.00062 40.5 20.5 185 321-535 126-316 (420)
452 3scy_A Hypothetical bacterial 89.3 28 0.00094 37.8 25.4 73 456-537 224-301 (361)
453 3mkq_A Coatomer beta'-subunit; 89.2 26 0.00088 42.9 23.4 188 303-534 68-264 (814)
454 2pbi_B Guanine nucleotide-bind 89.1 17 0.00058 39.8 19.6 189 303-532 77-274 (354)
455 3dwl_C Actin-related protein 2 88.9 0.84 2.9E-05 50.5 8.6 150 353-529 22-177 (377)
456 1erj_A Transcriptional repress 88.9 24 0.00081 39.2 20.9 146 303-480 136-288 (393)
457 3k26_A Polycomb protein EED; W 88.7 24 0.00083 37.7 20.4 225 301-565 84-357 (366)
458 2dph_A Formaldehyde dismutase; 88.6 0.38 1.3E-05 54.9 5.6 100 893-999 183-301 (398)
459 3zwl_B Eukaryotic translation 88.5 23 0.00077 38.0 20.0 226 303-564 87-336 (369)
460 4g56_B MGC81050 protein; prote 88.5 4.3 0.00015 44.9 14.1 183 303-529 152-343 (357)
461 1f8f_A Benzyl alcohol dehydrog 88.5 0.53 1.8E-05 53.1 6.6 98 892-999 187-291 (371)
462 4ej6_A Putative zinc-binding d 88.5 0.49 1.7E-05 53.4 6.3 99 892-1000 179-287 (370)
463 1qhu_A Protein (hemopexin); be 88.4 4.2 0.00014 47.0 14.1 182 302-529 159-385 (460)
464 3azo_A Aminopeptidase; POP fam 88.4 12 0.0004 44.9 19.1 198 318-537 159-377 (662)
465 1pl8_A Human sorbitol dehydrog 88.3 0.89 3E-05 50.9 8.3 97 893-999 169-275 (356)
466 3dr2_A Exported gluconolactona 88.3 27 0.00091 37.2 20.1 202 302-537 57-275 (305)
467 4aow_A Guanine nucleotide-bind 88.3 5.8 0.0002 42.5 14.8 146 355-530 186-338 (340)
468 2xdw_A Prolyl endopeptidase; a 88.3 21 0.00071 43.4 21.4 199 320-536 151-376 (710)
469 3e5z_A Putative gluconolactona 88.2 13 0.00043 39.4 17.3 180 353-561 39-235 (296)
470 2hes_X YDR267CP; beta-propelle 88.1 15 0.00051 39.8 18.1 192 303-529 120-328 (330)
471 4e54_B DNA damage-binding prot 88.1 1.5 5.3E-05 49.9 10.3 189 303-531 133-329 (435)
472 2ghs_A AGR_C_1268P; regucalcin 88.0 33 0.0011 37.1 22.8 191 302-536 61-267 (326)
473 3vyw_A MNMC2; tRNA wobble urid 87.9 2.2 7.6E-05 46.4 10.7 131 897-1048 98-257 (308)
474 3odt_A Protein DOA1; ubiquitin 87.8 29 0.00098 36.2 21.5 185 304-532 31-217 (313)
475 3sfz_A APAF-1, apoptotic pepti 87.8 17 0.00058 47.3 21.3 219 302-564 627-861 (1249)
476 3s2e_A Zinc-containing alcohol 87.7 0.68 2.3E-05 51.4 6.8 98 892-1000 163-266 (340)
477 3iz6_a 40S ribosomal protein R 87.5 38 0.0013 37.3 21.9 181 321-529 181-375 (380)
478 1kol_A Formaldehyde dehydrogen 87.4 0.87 3E-05 51.8 7.6 99 893-998 183-301 (398)
479 3mmy_A MRNA export factor; mRN 87.2 13 0.00046 39.8 17.0 185 302-530 54-248 (368)
480 2pm9_A Protein WEB1, protein t 87.2 8.8 0.0003 42.5 15.8 196 302-533 79-298 (416)
481 3i2n_A WD repeat-containing pr 87.0 8.2 0.00028 41.5 15.1 189 302-529 31-243 (357)
482 3fpc_A NADP-dependent alcohol 86.8 0.47 1.6E-05 53.1 4.8 97 893-999 164-268 (352)
483 1erj_A Transcriptional repress 86.7 26 0.00087 38.9 19.4 148 353-530 134-288 (393)
484 1vj0_A Alcohol dehydrogenase, 86.7 2 6.7E-05 48.6 9.9 98 893-1000 193-301 (380)
485 1qks_A Cytochrome CD1 nitrite 86.6 35 0.0012 40.5 21.3 190 302-534 167-378 (567)
486 3ju4_A Endo-N-acetylneuraminid 86.5 39 0.0013 37.5 19.0 185 269-464 269-482 (670)
487 1pqw_A Polyketide synthase; ro 86.5 0.67 2.3E-05 46.9 5.3 95 893-999 36-139 (198)
488 1pgu_A Actin interacting prote 86.4 24 0.0008 41.3 19.8 152 356-531 175-330 (615)
489 4a2c_A Galactitol-1-phosphate 86.4 1.7 5.9E-05 48.1 9.1 102 892-1000 157-263 (346)
490 1e3i_A Alcohol dehydrogenase, 86.2 1 3.5E-05 50.8 7.2 96 893-998 193-298 (376)
491 3dm0_A Maltose-binding peripla 86.0 42 0.0014 40.5 22.2 189 302-533 442-636 (694)
492 1kb0_A Quinohemoprotein alcoho 85.9 19 0.00066 43.7 19.0 125 348-485 72-207 (677)
493 3uko_A Alcohol dehydrogenase c 85.7 0.64 2.2E-05 52.6 5.2 97 893-999 191-297 (378)
494 1nir_A Nitrite reductase; hemo 85.5 27 0.00094 41.0 19.6 189 302-535 149-361 (543)
495 1flg_A Protein (quinoprotein e 85.5 36 0.0012 40.5 20.7 113 303-435 70-201 (582)
496 3azo_A Aminopeptidase; POP fam 85.2 16 0.00054 43.8 17.7 222 320-563 102-355 (662)
497 3bg1_A Protein SEC13 homolog; 85.2 7.2 0.00025 42.0 13.3 111 302-435 25-143 (316)
498 1yfq_A Cell cycle arrest prote 85.0 42 0.0015 35.5 22.4 219 303-565 69-314 (342)
499 3jv7_A ADH-A; dehydrogenase, n 85.0 1.7 5.9E-05 48.2 8.2 101 892-1000 168-273 (345)
500 3b7f_A Glycosyl hydrolase, BNR 84.9 34 0.0012 38.0 19.3 191 322-536 33-269 (394)
No 1
>2it2_A UPF0130 protein PH1069; hypothetical protein, NPPSFA, national project on protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2drv_A 2it3_A
Probab=100.00 E-value=5.6e-61 Score=489.93 Aligned_cols=188 Identities=36% Similarity=0.544 Sum_probs=171.1
Q ss_pred ccHHHHHHHHHHhccCCCCCCCCCCCCCCCcHHHHHHHhcCCCeEEecCccceeEEeecCCCC-CCCcEEEEEEccCCCh
Q 036185 39 MSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVNK-PKGGTWLFITHDPADV 117 (1057)
Q Consensus 39 ~~f~~~k~~~l~~l~~~~~d~s~~g~vD~~i~~l~~~in~~~~~~TtSSCsGRi~~~~~~~~~-~~~~~~l~~~H~~~~~ 117 (1057)
.+|+++|+++|++|. |+||||+||++|+|||++||+|++|||||||||||+||++|.++ +++|+||||||+|++.
T Consensus 9 ~~F~~~K~~~L~~l~----~~s~kG~VD~~i~~ll~~INs~~~~~TTSSCSGRIsv~~~~~~~~K~~g~wl~~sH~~~~~ 84 (200)
T 2it2_A 9 ENFERAKKEALMSLE----IALRKGEVDEDIIPLLKKINSIENYFTTSSCSGRISVMEMPHFGDKVNAKWLGKWHREVSL 84 (200)
T ss_dssp TTHHHHHHHHHHHHH----HHHHHTCSCTTTHHHHHHHHHSTTEEECSCBCCEEEEEEEC-------CEEEEEESSCCCH
T ss_pred HHHHHHHHHHHHHHH----hhcccCCCChHHHHHHHHHhCCCCcEEccCCCccEEEEecCCcCCCCCCEEEEEECCCCCH
Confidence 479999999999997 47899999999999999999999999999999999999998874 3478999999999999
Q ss_pred hhHHhhhcCCCCCCCCCCCCceEEEEEcCcEEEEEeCCHHHHHHHHHHHHHcCccccCccccC-CceEEEEeccceeeee
Q 036185 118 DSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVK-KRVIVGIRCSLRLEVP 196 (1057)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ep~ilhv~~~~~~~a~~ll~~a~~~Gfr~Sgi~~~~-~~~~v~ir~~~~l~~p 196 (1057)
+|+.+++. . ...+.+|||||||||||+|+|+++|++||++|++||||||||++++ +++||||||+++||+|
T Consensus 85 ~e~~~~l~-~-------~~~~~l~~kfep~IlHV~~~~l~~A~~Ll~~A~~~GFr~SGi~s~~~~~~iVaIrs~~~levP 156 (200)
T 2it2_A 85 YEVLEAIK-K-------HRSGQLWFLVRSPILHVGAKTLEDAVKLVNLAVSCGFKYSNIKSISNKKLIVEIRSTERMDVL 156 (200)
T ss_dssp HHHHHHHT-T-------CCSSEEEEEEECCEEEEEESSHHHHHHHHHHHHHTTCTTCEEECC----CEEEEECSCCEEEE
T ss_pred HHHHHHhh-c-------cCCceEEEEecCCEEEEeeCCHHHHHHHHHHHHHcCcCccCcEecCCCceEEEEeccccEEEE
Confidence 99999987 2 1237999999999999999999999999999999999999999987 7999999999999999
Q ss_pred eccCCceecCHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhh
Q 036185 197 LGESGNVLVSQDYVRFLVGIANQKLEANSRRIDGFLQAFNFM 238 (1057)
Q Consensus 197 l~~~~~~~v~~~yl~~lv~~~N~~l~~n~~rl~r~~~~l~~~ 238 (1057)
|+.+|+.+|+++||++|+++||++|.+|++||.||+++|+++
T Consensus 157 l~~~g~~lV~~eyl~~Lv~~aN~kl~~n~~rl~rl~~~l~~l 198 (200)
T 2it2_A 157 LGENGEIFVGEEYLNKIVEIANDQMRRFKEKLKRLESKINAL 198 (200)
T ss_dssp EEETTEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGG
T ss_pred EeeCCeEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999875
No 2
>2qg3_A UPF0130 protein AF_2059; TYW3 methyltransferase-like prrotein, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.95A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=9e-61 Score=487.85 Aligned_cols=190 Identities=29% Similarity=0.451 Sum_probs=176.0
Q ss_pred CcccccHHHHHHHHHHhccCCCCCCCCCCCCCCCcHHHHHHHhcCCCeEEecCccceeEEeecCCCCCC-CcEEEEEEcc
Q 036185 35 KKENMSFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVNKPK-GGTWLFITHD 113 (1057)
Q Consensus 35 ~~~~~~f~~~k~~~l~~l~~~~~d~s~~g~vD~~i~~l~~~in~~~~~~TtSSCsGRi~~~~~~~~~~~-~~~~l~~~H~ 113 (1057)
.++-|.|+++|+++|++|.. +||||+||++|+|||++||++++|||||||||||+||++|.++.| +|+||||||+
T Consensus 9 ~~~~~~~~~~K~~~L~~l~d----~s~kG~VD~~I~~Ll~~INs~~~~~TTSSCSGRIsvf~~~~~~~K~~g~wL~~sH~ 84 (208)
T 2qg3_A 9 HHHHMMWEQFKKEKLRGYLE----AKNQRKVDFDIVELLDLINSFDDFVTLSSCSGRIAVVDLEKPGDKASSLFLGKWHE 84 (208)
T ss_dssp -----CHHHHHHHHHHHHHH----HHHTTCSCGGGHHHHHHHHTSTTEEEEEEECCEEEEEEESSTTCGGGCEEEEEESS
T ss_pred hhhHHHHHHHHHHHHHHHHh----hhhcCCCChHHHHHHHHHhCCCCeEEcCCCcccEEEEecCCCCCCCCCEEEEEECC
Confidence 35679999999999999864 899999999999999999999999999999999999999987544 6899999999
Q ss_pred CCChhhHHhhhcCCCCCCCCCCCCceEEEEEcCcEEEEEeCCHHHHHHHHHHHHHcCccccCccccCCceEEEEecccee
Q 036185 114 PADVDSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVKKRVIVGIRCSLRL 193 (1057)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ep~ilhv~~~~~~~a~~ll~~a~~~Gfr~Sgi~~~~~~~~v~ir~~~~l 193 (1057)
|++.+|+.+++. + ..+.+|||||||||||+|+|+++|++||++|++||||||||++++ ++||||||+++|
T Consensus 85 pv~~~ev~~~l~-~--------~~~~i~~kfep~ILHV~cr~le~A~~Ll~~A~~~GFr~SGI~s~~-r~iVaIrs~~~L 154 (208)
T 2qg3_A 85 GVEVSEVAEAAL-R--------SRKVAWLIQYPPIIHVACRNIGAAKLLMNAANTAGFRRSGVISLS-NYVVEIASLERI 154 (208)
T ss_dssp CCCHHHHHHHHT-T--------CSSEEEEEEECCEEEEEESSHHHHHHHHHHHHHHTCTTCEEEETT-TTEEEECCCCCE
T ss_pred CCCHHHHHHHhc-c--------ccceEEEEecCCEEEEEeCCHHHHHHHHHHHHHcCccccCeeecc-eeEEEEeccCcE
Confidence 999999999987 2 127899999999999999999999999999999999999999998 799999999999
Q ss_pred eeeeccCCceecCHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhh
Q 036185 194 EVPLGESGNVLVSQDYVRFLVGIANQKLEANSRRIDGFLQAFNFM 238 (1057)
Q Consensus 194 ~~pl~~~~~~~v~~~yl~~lv~~~N~~l~~n~~rl~r~~~~l~~~ 238 (1057)
|+||+.+|+.+|+++||++|+++||++|.+|++||.||+++|+.+
T Consensus 155 evPl~~~g~~lV~eeyL~~Lv~~aN~kl~~nk~Rl~rl~~~l~~l 199 (208)
T 2qg3_A 155 ELPVAEKGLMLVDDAYLSYVVRWANEKLLKGKEKLGRLQEALESL 199 (208)
T ss_dssp EEEEEETTEESSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeeCCeEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999986
No 3
>1tlj_A Hypothetical UPF0130 protein SSO0622; midwest center for structural genomics, PSI, protein structure initiative, MCSG; 2.80A {Sulfolobus solfataricus} SCOP: d.282.1.1
Probab=100.00 E-value=3.4e-60 Score=487.94 Aligned_cols=188 Identities=24% Similarity=0.363 Sum_probs=175.2
Q ss_pred cHHHHHHHHHHhccCCCCCCCCCCCCCCCcHHHHHHHh-cCCCeEEecCccceeEEeecCCCCC-CCcEEEEEEccCCCh
Q 036185 40 SFEQRKAATLASLSSSATDKSPKGTLDTPIIPLLNAIN-SHPNYYTTSSCSGRISIFSHPVNKP-KGGTWLFITHDPADV 117 (1057)
Q Consensus 40 ~f~~~k~~~l~~l~~~~~d~s~~g~vD~~i~~l~~~in-~~~~~~TtSSCsGRi~~~~~~~~~~-~~~~~l~~~H~~~~~ 117 (1057)
.|+++|+++|++|.. .|+||+||++|+|||++|| +|++|||||||||||+||+++.++. ++|+||||||+|++.
T Consensus 5 ~F~~~K~~~L~~L~~----~~~kG~VD~~I~~Ll~~IN~s~~~~~TTSSCSGRIsv~~~~~~~~K~~g~wl~~sH~pv~~ 80 (213)
T 1tlj_A 5 VWEELREKALNKIYH----DKEIGYLDPDILGFLLAFYRNRNDVYTQSSCSGRITIVDAEMPWDRKNSTIIFKNHLRITE 80 (213)
T ss_dssp HHHHHHHHHHHHHHH----HHHTTCSCGGGHHHHHHHHHTCSSEEEEEEECCEEEEEEESSTTCSTTCEEEEEESSCCCH
T ss_pred HHHHHHHHHHHHHHh----hcccCCCCHHHHHHHHHHhccCCCeEEccCCCccEEEEecCCCCCCCCCEEEEEECCCCCH
Confidence 699999999999975 6899999999999999999 9999999999999999999988743 478999999999999
Q ss_pred hhHHhhhcCCCCCCCCCCCCceEEEEEcCcEEEEEeCCHHHHHHHHHHHHHcCccccCccccC-CceEEEEeccceeeee
Q 036185 118 DSVLSLLFFPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVK-KRVIVGIRCSLRLEVP 196 (1057)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ep~ilhv~~~~~~~a~~ll~~a~~~Gfr~Sgi~~~~-~~~~v~ir~~~~l~~p 196 (1057)
+|+.+++. . ...+.+|||||||||||+|+|+++|++||++|++||||||||++++ +++||||||+++||+|
T Consensus 81 ~ev~~~l~-~-------~~~~~l~~kfep~ILHV~~~~le~A~~Ll~~A~~~GFr~SGi~s~~~~~~iVaIrs~~~levP 152 (213)
T 1tlj_A 81 QDLEDVLS-K-------NQVRRLWLIVQGPIIHIYAKNIETGWDILKIAREAGFKHSGILATNQKGVLVELRTGIRMVHL 152 (213)
T ss_dssp HHHHHHHH-S-------CCSSEEEEEEECCEEEEEESSHHHHHHHHHHHHHHTCTTCEEEEEETTEEEEEECCCCEEEEE
T ss_pred HHHHHHhh-c-------cccceEEEEecCCEEEEEeCCHHHHHHHHHHHHHcCcccccceecCCCceEEEEeccCcEEEE
Confidence 99999987 2 1237999999999999999999999999999999999999999986 7899999999999999
Q ss_pred eccCCceecCHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhh
Q 036185 197 LGESGNVLVSQDYVRFLVGIANQKLEANSRRIDGFLQAFNFMV 239 (1057)
Q Consensus 197 l~~~~~~~v~~~yl~~lv~~~N~~l~~n~~rl~r~~~~l~~~~ 239 (1057)
|+.+|+.+|+++||++|+++||++|.+|++||+||+++|+..+
T Consensus 153 l~~~g~~lV~~eyL~~Lv~~aN~kl~~nk~rl~rl~~~l~~~~ 195 (213)
T 1tlj_A 153 LRESNTERVDKDKIKTLVNVCNEVLARGKQKMNLLKDLLSSSS 195 (213)
T ss_dssp EESSTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred EecCCeEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999998654
No 4
>2dvk_A UPF0130 protein APE0816; hypothetical protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=100.00 E-value=2.7e-58 Score=464.08 Aligned_cols=181 Identities=25% Similarity=0.354 Sum_probs=154.2
Q ss_pred HHHHhccCCCCCCCCCCCCCCCcHHHHHHHhcCCCeEEecCccceeEEeecCCCCCC-CcEEEEEEccCCChhhHHhhhc
Q 036185 47 ATLASLSSSATDKSPKGTLDTPIIPLLNAINSHPNYYTTSSCSGRISIFSHPVNKPK-GGTWLFITHDPADVDSVLSLLF 125 (1057)
Q Consensus 47 ~~l~~l~~~~~d~s~~g~vD~~i~~l~~~in~~~~~~TtSSCsGRi~~~~~~~~~~~-~~~~l~~~H~~~~~~~~~~~~~ 125 (1057)
.|++||. |+++||+||++|+|||++||+|++|||||||||||+||+++.++.| +|+||||||+|++.+|+.+++.
T Consensus 3 ~~~~rl~----~~~~kG~VD~~i~~ll~~INs~~~~~TTSSCSGRIsv~~~~~~~~K~~g~wl~~sH~p~~~~e~~~~l~ 78 (188)
T 2dvk_A 3 SIEEVLL----EERLIGYLDPGAEKVLARINRPSKIVSTSSCTGRITLIEGEAHWLRNGARVAYKTHHPISRSEVERVLR 78 (188)
T ss_dssp -------------------CGGGHHHHHHHHCSTTEEEEEEECCEEEEEESSCSCCC----EEEEESSCCCHHHHHHHHT
T ss_pred hHHHHHH----HHHHcCCCChHHHHHHHHHhCCCCcEEccCCCccEEEEeccCCCCCCCcEEEEEECCCCCHHHHHHHhh
Confidence 3567775 4789999999999999999999999999999999999998877444 7899999999999999999987
Q ss_pred CCCCCCCCCCCCceEEEEEcCcEEEEEeCCHHHHHHHHHHHHHcCccccCccccC-C-ceEEEEeccceeeeeeccCCce
Q 036185 126 FPTHTTPSSPTRDQLVFRFEPLIVAVECRDVESAEALVSIAVSSGLRESGVTSVK-K-RVIVGIRCSLRLEVPLGESGNV 203 (1057)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~ep~ilhv~~~~~~~a~~ll~~a~~~Gfr~Sgi~~~~-~-~~~v~ir~~~~l~~pl~~~~~~ 203 (1057)
.. .+.+|||||||||||+|+|+++|++||++|++||||||||++++ + ++||||||+++||+||+.+|+.
T Consensus 79 -~~--------~~~i~~kfep~ILHV~~~~le~A~~Ll~~A~~~GFr~SGi~s~~~~gr~iVaIrs~~~levPl~~~g~~ 149 (188)
T 2dvk_A 79 -RG--------FTNLWLKVTGPILHLRVEGWQCAKSLLEAARRNGFKHSGVISIAEDSRLVIEIMSSQSMSVPLVMEGAR 149 (188)
T ss_dssp -TC--------CSSEEEEEECCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECSCEEEEEEEETTEE
T ss_pred -cc--------CceEEEEecCCEEEEeeCCHHHHHHHHHHHHHcCcccccceeecCCCcEEEEEecCCcEEEEEeeCCeE
Confidence 21 27899999999999999999999999999999999999999987 4 7999999999999999999999
Q ss_pred ecCHhHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhhc
Q 036185 204 LVSQDYVRFLVGIANQKLEANSRRIDGFLQAFNFMVG 240 (1057)
Q Consensus 204 ~v~~~yl~~lv~~~N~~l~~n~~rl~r~~~~l~~~~~ 240 (1057)
+|+++||++|+++||++|.+|++||+||+++|+.+++
T Consensus 150 lV~~eyl~~Lv~~aN~kl~~nk~rl~r~~~~l~~~~~ 186 (188)
T 2dvk_A 150 IVGDDALDMLIEKANTILVESRIGLDTFSREVEELVE 186 (188)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998764
No 5
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=100.00 E-value=1.6e-48 Score=426.94 Aligned_cols=270 Identities=29% Similarity=0.463 Sum_probs=229.6
Q ss_pred HHHHHHHhcCCCchHHhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCCCccccceE
Q 036185 772 EAVASLIEQKGLSARLLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALE 851 (1057)
Q Consensus 772 ~~l~~~l~~~~~~~~~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~r~~~~~ 851 (1057)
..++++|+ +.+|+++++.+|++||++||+++++++.+. +.+.+.|++++++..+++.+++++.|. +++|.++++
T Consensus 8 ~~~~e~l~-~~lp~~l~~~~P~~~e~~Gdi~il~~~~~~----~~~~~~i~~~l~~~~~vk~V~~k~~i~-g~~R~~~~e 81 (278)
T 3k6r_A 8 PRIREILS-KELPEELVKLLPKRWVRIGDVLLLPLRPEL----EPYKHRIAEVYAEVLGVKTVLRKGHIH-GETRKPDYE 81 (278)
T ss_dssp HHHHHHHT-TTSCGGGGGGSCSCCEEETTEEEECC-CTT----GGGHHHHHHHHHHHHTCSEEEECC-----------CE
T ss_pred hHHHHHHh-hhCChhHHhhCCCCceEECCEEEEeCChhH----hHHHHHHHHHHHhccCCeEEEEeCCcC-Cccccccce
Confidence 45566654 347999999999999999999999987543 344566667777778888888888775 889999999
Q ss_pred EEeeCCceEEEEeCCEEEEEecceeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHH
Q 036185 852 ILVGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCA 931 (1057)
Q Consensus 852 ~l~G~~~~~~~~e~gi~~~~d~~~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~a 931 (1057)
+|+|++++++++|||++|.+|++++||++++.+||.|+...+++|++|||+|||+|+|++++| +.|+++|+|+|+||+|
T Consensus 82 ~L~G~~~~~~~~E~G~~~~~D~~k~~f~~~~~~er~ri~~~~~~g~~VlD~~aG~G~~~i~~a-~~g~~~V~avD~np~a 160 (278)
T 3k6r_A 82 LLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIA-VYGKAKVIAIEKDPYT 160 (278)
T ss_dssp EEECSCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTTHHHH-HHTCCEEEEECCCHHH
T ss_pred EEecCCcEEEEEECCEEEEEeccceEEcCCcHHHHHHHHHhcCCCCEEEEecCcCcHHHHHHH-HhcCCeEEEEECCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998 4577789999999999
Q ss_pred HHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHH
Q 036185 932 VEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHV 1011 (1057)
Q Consensus 932 i~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~ 1011 (1057)
++++++|+++|+++++++++++|++++++...||+|+|||||++..+|..|+++|+ +||+||+|+++++.+.. ++.
T Consensus 161 ~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~~~~~l~~a~~~lk-~gG~ih~~~~~~e~~~~---~~~ 236 (278)
T 3k6r_A 161 FKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRTHEFIPKALSIAK-DGAIIHYHNTVPEKLMP---REP 236 (278)
T ss_dssp HHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSGGGGHHHHHHHEE-EEEEEEEEEEEEGGGTT---TTT
T ss_pred HHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCcHHHHHHHHHHHcC-CCCEEEEEeeecccccc---hhH
Confidence 99999999999999999999999999988888999999998888999999999998 79999999999876543 233
Q ss_pred HHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEEEEEEEEee
Q 036185 1012 SKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLVADVGCRQ 1054 (1057)
Q Consensus 1012 ~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~~~d~~~~~ 1054 (1057)
.+.+++++++.|+.+ ++.++++||+|||++||+|+||+|.+
T Consensus 237 ~e~i~~~~~~~g~~v--~~~~~~~Vk~yaP~~~hvv~D~~i~k 277 (278)
T 3k6r_A 237 FETFKRITKEYGYDV--EKLNELKIKRYAPGVWHVVLDLRVFK 277 (278)
T ss_dssp HHHHHHHHHHTTCEE--EEEEEEEEEEETTTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCcE--EEEEEEEEEeECcCccEEEEEEEEeC
Confidence 567778888888754 67789999999999999999999975
No 6
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=100.00 E-value=7.9e-40 Score=371.95 Aligned_cols=331 Identities=23% Similarity=0.254 Sum_probs=258.9
Q ss_pred cceehhhHHHHHHHHHHHHhcCcccccCcceeecCCcEEEeccchhhhhhhhhcccCCCCCccccccccCCCCCCCCccc
Q 036185 653 HWVVELDKKYAKFGKDILKKFGWLHLGRKPHQQEDGKRICFPVTEKFCAIFQEKQLHSGGESEGLNTIDLSKPYTGGVLL 732 (1057)
Q Consensus 653 ~~~vkv~k~~ae~~k~~L~~~~~ld~~~ki~~~~~~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1057)
+.|++|+|+++|.+|+.|++.+|||++|||.++++ +++|||++...+.+
T Consensus 2 ~~~~~v~~~~~~~~~~~l~~~~~l~~~~~~~~~~~--~~~~pv~~~~~~~~----------------------------- 50 (336)
T 2yx1_A 2 PLCLKINKKHGEQTRRILIENNLLNKDYKITSEGN--YLYLPIKDVDEDIL----------------------------- 50 (336)
T ss_dssp CEEEEEEGGGHHHHHHHHHHTTCBCTTSCCEEETT--EEEEEBCSCCHHHH-----------------------------
T ss_pred CeeEEEcHHHHHHHHHHHHhCCcccCCcceeecCC--EEEEEecccchhhc-----------------------------
Confidence 58999999999999999999999999999999754 99999986321110
Q ss_pred cccchhhhhhhhhhcCceeccchhhh-cccCCCChhHHHHHHHHHHHhcCCCchH-HhhcCCCceEEeCCEEEEccCCCC
Q 036185 733 DETSCATALHFLKECGATKQMDEAVE-VKRAPKSPFKAMTEAVASLIEQKGLSAR-LLEQLPSRWERLGDIVVLPVTSFK 810 (1057)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~l~~lp~~~d~~gdi~vl~~~~~~ 810 (1057)
......++++++++++. .++.+.++ .+.+++. +|++ +++++|.+||+|||+++++.++..
T Consensus 51 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~-----~~~~~~~~~~p~~~d~~g~~~vv~~~~~~ 112 (336)
T 2yx1_A 51 ---------KSILNIEFELVDKELEEKKIIKKPSF----REIISKK-----YRKEIDEGLISLSYDVVGDLVILQISDEV 112 (336)
T ss_dssp ---------TTTCCSCCEEEECCCCCC-----CCS----HHHHHHH-----THHHHTTSSBCSCCEEETTEEEECBCSCS
T ss_pred ---------cccccCceeEEEeecccccccccCCH----HHHHhhh-----CCchhccccCCceEEEECCEEEEecCcch
Confidence 01112356777777654 33222232 2445555 4666 678899999999999999988543
Q ss_pred CchhhhHHhhHHHHHHhHcCccEEEcccccCCCCccccceEEEeeCCc-eEEEEeCCEEEEEecceeEeeCCCHHHHHHH
Q 036185 811 DPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNG-WVKHCENGILYSFDATKCMFSWGNLSEKLRM 889 (1057)
Q Consensus 811 ~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~r~~~~~~l~G~~~-~~~~~e~gi~~~~d~~~~~f~~~~~~er~r~ 889 (1057)
+....+.|++++.+.++.+.++.+.+...+.+|.++.++++|+.. .+.++|+|++|.+|+.++||++++..+|.++
T Consensus 113 ---~~~~~~~i~~~l~~~~~~~~v~~~~~~~~g~~r~~~~~~l~G~~~~~~~~~e~g~~f~~d~~~~~~~~~~~~er~~i 189 (336)
T 2yx1_A 113 ---DEKIRKEIGELAYKLIPCKGVFRRKSEVKGEFRVRELEHLAGENRTLTIHKENGYRLWVDIAKVYFSPRLGGERARI 189 (336)
T ss_dssp ---CHHHHHHHHHHHHHHSCCSEEEEEC-------CCCCEEEEEECCCCEEEEEETTEEEEEETTTSCCCGGGHHHHHHH
T ss_pred ---hhhHHHHHHHHHHHHCCCcEEEEcCCCCCCcccccceEEEeCCCCcEEEEEECCEEEEEehHHhccCCccHHHHHHH
Confidence 334467778888777765667665422247788889999999864 4568899999999999999999999999998
Q ss_pred hhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEE
Q 036185 890 ARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCL 969 (1057)
Q Consensus 890 ~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil 969 (1057)
...+.+|++|||+|||+|+|+++ | .++.+|+|+|+||.|++.+++|++.|++.++++++++|+++++ ..||+|++
T Consensus 190 ~~~~~~~~~VLDlg~G~G~~~l~-a--~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~ 264 (336)
T 2yx1_A 190 MKKVSLNDVVVDMFAGVGPFSIA-C--KNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIM 264 (336)
T ss_dssp HHHCCTTCEEEETTCTTSHHHHH-T--TTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEE
T ss_pred HHhcCCCCEEEEccCccCHHHHh-c--cCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEE
Confidence 88888999999999999999999 8 3788999999999999999999999999768999999999987 67999999
Q ss_pred CCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEEEEE
Q 036185 970 GLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLVAD 1049 (1057)
Q Consensus 970 ~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~~~d 1049 (1057)
||++.....+..+.++|+ +||+|++++|.+. . +.+.+.+.+.+ .+++.+++.|++|+|+.+|+|+|
T Consensus 265 dpP~~~~~~l~~~~~~L~-~gG~l~~~~~~~~--~----~~~~~~l~~~~-------~~~i~~~~~v~~~~p~~~~~~~~ 330 (336)
T 2yx1_A 265 NLPKFAHKFIDKALDIVE-EGGVIHYYTIGKD--F----DKAIKLFEKKC-------DCEVLEKRIVKSYAPREYILALD 330 (336)
T ss_dssp CCTTTGGGGHHHHHHHEE-EEEEEEEEEEESS--S----HHHHHHHHHHS-------EEEEEEEEEEEEEETTEEEEEEE
T ss_pred CCcHhHHHHHHHHHHHcC-CCCEEEEEEeecC--c----hHHHHHHHHhc-------CCcEEEEEEEeccCCCCCEEEEE
Confidence 995555677888888888 7999999999987 2 23344444332 33566789999999999999999
Q ss_pred EEEee
Q 036185 1050 VGCRQ 1054 (1057)
Q Consensus 1050 ~~~~~ 1054 (1057)
|++..
T Consensus 331 ~~l~~ 335 (336)
T 2yx1_A 331 FKINK 335 (336)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99874
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7.7e-39 Score=359.75 Aligned_cols=286 Identities=18% Similarity=0.264 Sum_probs=245.7
Q ss_pred CcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEccc
Q 036185 283 EKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGR 362 (1057)
Q Consensus 283 ~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~ 362 (1057)
.+..|.+|+++.+++. ||+|||.. ...++++++||+.+++|..++ .+|.+|.+|++++++++||++||.
T Consensus 11 ~~~~~~~~~~~~~~~~-----i~v~GG~~----~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~~~~lyv~GG~ 79 (308)
T 1zgk_A 11 SGLVPRGSHAPKVGRL-----IYTAGGYF----RQSLSYLEAYNPSNGTWLRLA--DLQVPRSGLAGCVVGGLLYAVGGR 79 (308)
T ss_dssp ----------CCCCCC-----EEEECCBS----SSBCCCEEEEETTTTEEEECC--CCSSCCBSCEEEEETTEEEEECCE
T ss_pred CCeeeCCccccCCCCE-----EEEEeCcC----CCCcceEEEEcCCCCeEeECC--CCCcccccceEEEECCEEEEECCC
Confidence 4557999999999888 99999983 246889999999999999996 889999999999999999999998
Q ss_pred C---CCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCC
Q 036185 363 A---DPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING 439 (1057)
Q Consensus 363 ~---~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g 439 (1057)
. .....++++|+||+.+++|+.++ ++|.+|..|++++++++||++||.++...++++++||+.+++|+.+++
T Consensus 80 ~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-- 154 (308)
T 1zgk_A 80 NNSPDGNTDSSALDCYNPMTNQWSPCA---PMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-- 154 (308)
T ss_dssp EEETTEEEECCCEEEEETTTTEEEECC---CCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC--
T ss_pred cCCCCCCeecceEEEECCCCCeEeECC---CCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC--
Confidence 4 33467899999999999999997 789999999999999999999999888888999999999999999975
Q ss_pred CCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCC
Q 036185 440 EGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNY 519 (1057)
Q Consensus 440 ~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~ 519 (1057)
+|.+|..|+++.++++||++||.++...++++++||+.+++|+.+ ..+|.+|..|+++.++++||++||.+.....
T Consensus 155 -~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 155 -MLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMI---TAMNTIRSGAGVCVLHNCIYAAGGYDGQDQL 230 (308)
T ss_dssp -CSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEECCBCSSSBC
T ss_pred -CCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC---CCCCCccccceEEEECCEEEEEeCCCCCCcc
Confidence 689999999999999999999998877799999999999999997 5789999999999999999999999877778
Q ss_pred CeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCCccccCCceecccEEeeccccccccCCCCCCC
Q 036185 520 QELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSLDDCNIP 595 (1057)
Q Consensus 520 ~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~~~~~g~~~~~~~~~dl~~~~~~~~~~~~~~ 595 (1057)
+++++||+++++|+.++.+ +.++..+++++++++|||+||... ....++.+.+|+.+..|...+..+.+
T Consensus 231 ~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~~~~~i~v~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 231 NSVERYDVETETWTFVAPM---KHRRSALGITVHQGRIYVLGGYDG----HTFLDSVECYDPDTDTWSEVTRMTSG 299 (308)
T ss_dssp CCEEEEETTTTEEEECCCC---SSCCBSCEEEEETTEEEEECCBCS----SCBCCEEEEEETTTTEEEEEEECSSC
T ss_pred ceEEEEeCCCCcEEECCCC---CCCccceEEEEECCEEEEEcCcCC----CcccceEEEEcCCCCEEeecCCCCCC
Confidence 9999999999999998743 345778899999999999999643 23466888999999889887554433
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=4.9e-37 Score=343.61 Aligned_cols=265 Identities=18% Similarity=0.250 Sum_probs=237.8
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.||+|||.+. ...+++++||+.+++|..++ .+|.+|.+|++++++++||++||..+ ...++++++||+.+++|
T Consensus 17 ~i~v~GG~~~----~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 17 LMVVVGGQAP----KAIRSVECYDFKEERWHQVA--ELPSRRCRAGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEEEECCBSS----SBCCCEEEEETTTTEEEEEC--CCSSCCBSCEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEE
T ss_pred EEEEECCCCC----CCCCcEEEEcCcCCcEeEcc--cCCcccccceEEEECCEEEEEeCcCC-CccccceEEECCCCCce
Confidence 4999999865 35789999999999999997 88999999999999999999999875 36789999999999999
Q ss_pred EEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEec
Q 036185 383 TLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGG 462 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG 462 (1057)
+.++ ++|.+|..|++++++++||++||.++...++++++||+.+++|+.+++ +|.+|..|+++.++++||++||
T Consensus 90 ~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG 163 (302)
T 2xn4_A 90 TSVA---NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP---MNTRRSSVGVGVVGGLLYAVGG 163 (302)
T ss_dssp EEEC---CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECC
T ss_pred eeCC---CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC---CCCcccCceEEEECCEEEEEeC
Confidence 9997 799999999999999999999999888889999999999999999965 6889999999999999999999
Q ss_pred CCCC--cccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCC
Q 036185 463 YNGE--KALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYV 540 (1057)
Q Consensus 463 ~~~~--~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~ 540 (1057)
.++. ..++++++||+.+++|+.+ +++|.+|..|+++.++++||++||.+.....+++++||+++++|+.++.++
T Consensus 164 ~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~- 239 (302)
T 2xn4_A 164 YDVASRQCLSTVECYNATTNEWTYI---AEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN- 239 (302)
T ss_dssp EETTTTEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS-
T ss_pred CCCCCCccccEEEEEeCCCCcEEEC---CCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC-
Confidence 8654 3589999999999999998 578999999999999999999999987777889999999999999997543
Q ss_pred CCCcccceEEEEeCCEEEEEeCCCccccCCceecccEEeeccccccccCC
Q 036185 541 CKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSLD 590 (1057)
Q Consensus 541 ~~~~~~~~~a~~~~~~iyi~GGg~~~~~~g~~~~~~~~~dl~~~~~~~~~ 590 (1057)
.++..++++.++++||++||... ....++.+.+|+.+..|...+
T Consensus 240 --~~r~~~~~~~~~~~i~v~GG~~~----~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 240 --MCRRNAGVCAVNGLLYVVGGDDG----SCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp --SCCBSCEEEEETTEEEEECCBCS----SSBCCCEEEEETTTTEEEECS
T ss_pred --CccccCeEEEECCEEEEECCcCC----CcccccEEEEcCCCCeEEECC
Confidence 35677889999999999999643 234678899999999998875
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=346.23 Aligned_cols=275 Identities=18% Similarity=0.228 Sum_probs=242.4
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
+.||+|||... .+++++||+.+++|..++ .+|.+|.+|++++++++||++||.. ...++++++||+.+++
T Consensus 12 ~~l~~~GG~~~------~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~ 81 (306)
T 3ii7_A 12 DYRIALFGGSQ------PQSCRYFNPKDYSWTDIR--CPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDS 81 (306)
T ss_dssp CEEEEEECCSS------TTSEEEEETTTTEEEECC--CCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTE
T ss_pred ceEEEEeCCCC------CceEEEecCCCCCEecCC--CCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCe
Confidence 46999999754 789999999999999987 7899999999999999999999987 5778999999999999
Q ss_pred EEEeeccCCCCCcccceEEEEECCEEEEEcccC-CCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLN-NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMF 460 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~-~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~ 460 (1057)
|+.++ ++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.+++ +|.+|..|+++.++++||++
T Consensus 82 W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~ 155 (306)
T 3ii7_A 82 WYSKL---GPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS---MLTQRCSHGMVEANGLIYVC 155 (306)
T ss_dssp EEEEE---CCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEE
T ss_pred EEECC---CCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC---CcCCcceeEEEEECCEEEEE
Confidence 99997 7899999999999999999999998 56778999999999999999965 68899999999999999999
Q ss_pred ecCCCCcc----cCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 461 GGYNGEKA----LGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 461 GG~~~~~~----~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
||.++... ++++++||+.+++|+.+ .++|.+|..|+++.++++||++||.+.....+++++||+.+++|+.++
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATETWTEL---CPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCCCCCCCcccccceEEEeCCCCCeEEEC---CCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 99876554 89999999999999998 578999999999999999999999887777899999999999999986
Q ss_pred ccCCCCCcccceEEEEeCCEEEEEeCCCccccCCceecccEEeeccccccccCCCCCCCCCCCccc
Q 036185 537 LNYVCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSLDDCNIPPEMGEKL 602 (1057)
Q Consensus 537 ~~~~~~~~~~~~~a~~~~~~iyi~GGg~~~~~~g~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~~~ 602 (1057)
.++ .++..++++.++++|||+||... ....++.+.+|+.+..|......+.+...+..-
T Consensus 233 ~~p---~~r~~~~~~~~~~~i~v~GG~~~----~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 233 PMP---WKGVTVKCAAVGSIVYVLAGFQG----VGRLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp CCS---CCBSCCEEEEETTEEEEEECBCS----SSBCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred CCC---CCccceeEEEECCEEEEEeCcCC----CeeeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 443 45778899999999999999643 235567889999999999886655554444333
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=340.25 Aligned_cols=268 Identities=20% Similarity=0.290 Sum_probs=239.0
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc-
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK- 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~- 381 (1057)
+||+|||.... ....+++++||+.+++|..++ .+|.+|.+|+++.++++||++||..+ ...++++|+||+.+++
T Consensus 16 ~i~~~GG~~~~--~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 16 VLLVVGGFGSQ--QSPIDVVEKYDPKTQEWSFLP--SITRKRRYVASVSLHDRIYVIGGYDG-RSRLSSVECLDYTADED 90 (301)
T ss_dssp EEEEECCEETT--TEECCCEEEEETTTTEEEECC--CCSSCCBSCEEEEETTEEEEECCBCS-SCBCCCEEEEETTCCTT
T ss_pred EEEEEeCccCC--CcceeEEEEEcCCCCeEEeCC--CCChhhccccEEEECCEEEEEcCCCC-CccCceEEEEECCCCCC
Confidence 59999994331 357899999999999999987 78999999999999999999999875 4678999999999999
Q ss_pred --EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEE
Q 036185 382 --WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYM 459 (1057)
Q Consensus 382 --W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv 459 (1057)
|+.++ ++|.+|..|++++++++||++||.++...++++++||+.+++|+.+++ +|.+|..|+++.++++||+
T Consensus 91 ~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv 164 (301)
T 2vpj_A 91 GVWYSVA---PMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD---MQTAREGAGLVVASGVIYC 164 (301)
T ss_dssp CCCEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEETTEEEE
T ss_pred CeeEECC---CCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCC---CCCCcccceEEEECCEEEE
Confidence 99996 889999999999999999999999988789999999999999999976 5889999999999999999
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccC
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNY 539 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~ 539 (1057)
+||.++...++++++||+.+++|+.+ +++|.+|..|+++.++++||++||.+.....+++++||+++++|+.++.+
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~- 240 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNV---TPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM- 240 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeC---CCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-
Confidence 99998888899999999999999998 57899999999999999999999998777789999999999999999744
Q ss_pred CCCCcccceEEEEeCCEEEEEeCCCccccCCceecccEEeeccccccccCCC
Q 036185 540 VCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSLDD 591 (1057)
Q Consensus 540 ~~~~~~~~~~a~~~~~~iyi~GGg~~~~~~g~~~~~~~~~dl~~~~~~~~~~ 591 (1057)
+.++..++++.++++||++||.... ...++.+.+|+.+..|.....
T Consensus 241 --p~~r~~~~~~~~~~~i~v~GG~~~~----~~~~~v~~yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 241 --TTPRCYVGATVLRGRLYAIAGYDGN----SLLSSIECYDPIIDSWEVVTS 286 (301)
T ss_dssp --SSCCBSCEEEEETTEEEEECCBCSS----SBEEEEEEEETTTTEEEEEEE
T ss_pred --CCcccceeEEEECCEEEEEcCcCCC----cccccEEEEcCCCCeEEEcCC
Confidence 3457788999999999999996432 345678889998888877643
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=337.99 Aligned_cols=262 Identities=16% Similarity=0.258 Sum_probs=230.2
Q ss_pred ceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccE
Q 036185 269 GLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHT 348 (1057)
Q Consensus 269 ~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs 348 (1057)
.-.|..+. ..|.+|.+|+++.+++. ||||||.+. ....+++++||+.+++|..++ ++|.+|.+|+
T Consensus 39 ~~~W~~~~-----~~p~~r~~~~~~~~~~~-----lyv~GG~~~---~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~ 103 (302)
T 2xn4_A 39 EERWHQVA-----ELPSRRCRAGMVYMAGL-----VFAVGGFNG---SLRVRTVDSYDPVKDQWTSVA--NMRDRRSTLG 103 (302)
T ss_dssp TTEEEEEC-----CCSSCCBSCEEEEETTE-----EEEESCBCS---SSBCCCEEEEETTTTEEEEEC--CCSSCCBSCE
T ss_pred CCcEeEcc-----cCCcccccceEEEECCE-----EEEEeCcCC---CccccceEEECCCCCceeeCC--CCCccccceE
Confidence 34677663 24457999999998776 999999875 246789999999999999997 7899999999
Q ss_pred EEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCC--cccceEEEEE
Q 036185 349 SSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNND--TIFSSLHVLD 426 (1057)
Q Consensus 349 ~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~--~~~~~v~~yD 426 (1057)
+++++++||++||.+. ...++++|+||+.+++|+.++ ++|.+|..|++++++++||++||.++. ..+++++.||
T Consensus 104 ~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp EEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEE
T ss_pred EEEECCEEEEEcCCCC-CccCceEEEEeCCCCeEeecC---CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEe
Confidence 9999999999999876 466789999999999999997 789999999999999999999998764 3589999999
Q ss_pred CCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCE
Q 036185 427 TDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNY 506 (1057)
Q Consensus 427 ~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~ 506 (1057)
+.+++|+.++. +|.+|.+|+++.++++||++||.++...++++++||+.+++|+.+ ..+|.+|..|+++.++++
T Consensus 180 ~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~~~~r~~~~~~~~~~~ 253 (302)
T 2xn4_A 180 ATTNEWTYIAE---MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQV---ADMNMCRRNAGVCAVNGL 253 (302)
T ss_dssp TTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTE
T ss_pred CCCCcEEECCC---CccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeC---CCCCCccccCeEEEECCE
Confidence 99999999965 688999999999999999999998887889999999999999998 578899999999999999
Q ss_pred EEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEE
Q 036185 507 LGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDL 557 (1057)
Q Consensus 507 l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~i 557 (1057)
||++||.+.....+++++||+++++|+.++. ..+.+|..|++++++++|
T Consensus 254 i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 254 LYVVGGDDGSCNLASVEYYNPTTDKWTVVSS--CMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEEECCBCSSSBCCCEEEEETTTTEEEECSS--CCSSCCBSCEEEEEEC--
T ss_pred EEEECCcCCCcccccEEEEcCCCCeEEECCc--ccCcccccceEEEecccC
Confidence 9999998877778999999999999999862 224567788888887764
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=348.06 Aligned_cols=259 Identities=17% Similarity=0.221 Sum_probs=228.1
Q ss_pred cccccceEEEEECCccCCcEEEEEcccCC---CCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEc
Q 036185 284 KLFLWGHSACILGNSINDSQILVFGGFGG---MGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIG 360 (1057)
Q Consensus 284 ~~~R~ghsa~~~~~~~~~~~lyvfGG~~~---~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~G 360 (1057)
|.+|.+|+++.+++. ||||||... .......+++++||+.+++|+.++ ++|.+|.+|++++++++||++|
T Consensus 33 p~~r~~~~~~~~~~~-----iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~~~~~~~~~lyv~G 105 (315)
T 4asc_A 33 QVPKNHVSLVTKENQ-----VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP--PLPSPRCLFGLGEALNSIYVVG 105 (315)
T ss_dssp CSCSSEEEEECTTCC-----EEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC--CBSSCEESCEEEEETTEEEEEC
T ss_pred CCCccceEEEEECCE-----EEEEcCcccCCCCCccccccceEEecCCCCeEEECC--CCCcchhceeEEEECCEEEEEe
Confidence 567999999998777 999999732 112344677999999999999987 7899999999999999999999
Q ss_pred ccC--CCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEccc-CCCcccceEEEEECCCCcEEEeec
Q 036185 361 GRA--DPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGL-NNDTIFSSLHVLDTDTLQWKELLI 437 (1057)
Q Consensus 361 G~~--~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~-~~~~~~~~v~~yD~~t~~W~~~~~ 437 (1057)
|.+ .....++++|+||+.+++|+.++ ++|.+|..|++++++++||++||. .+...++++++||+.+++|+.+++
T Consensus 106 G~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 182 (315)
T 4asc_A 106 GREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP 182 (315)
T ss_dssp CEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC
T ss_pred CCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC
Confidence 975 23578899999999999999997 789999999999999999999999 556788999999999999999975
Q ss_pred CCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCC-
Q 036185 438 NGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVR- 516 (1057)
Q Consensus 438 ~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~- 516 (1057)
+|.+|..|+++.++++||++||.++...++++++||+.+++|+.+ .++|.+|..|+++.++++||++||.+..
T Consensus 183 ---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~l~v~GG~~~~~ 256 (315)
T 4asc_A 183 ---MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPF---EAFPQERSSLSLVSLVGTLYAIGGFATLE 256 (315)
T ss_dssp ---CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEEEEEEEEE
T ss_pred ---CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEEC---CCCCCcccceeEEEECCEEEEECCccccC
Confidence 688999999999999999999998888889999999999999998 5689999999999999999999997531
Q ss_pred --------CCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCC
Q 036185 517 --------QNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGG 563 (1057)
Q Consensus 517 --------~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg 563 (1057)
...+++|+||+++++|+.+. +.++..++++++++++|++...
T Consensus 257 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~-----~~~r~~~~~~~~~~~l~v~~~~ 306 (315)
T 4asc_A 257 TESGELVPTELNDIWRYNEEEKKWEGVL-----REIAYAAGATFLPVRLNVLRLT 306 (315)
T ss_dssp CTTSCEEEEEEEEEEEEETTTTEEEEEE-----SCSSCCSSCEEEEEEECGGGSE
T ss_pred cCCccccccccCcEEEecCCCChhhhhc-----cCCcCccceEEeCCEEEEEEeh
Confidence 34678999999999999983 3457778899999999998753
No 13
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=337.47 Aligned_cols=259 Identities=17% Similarity=0.218 Sum_probs=229.1
Q ss_pred CceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCcccc
Q 036185 268 CGLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGH 347 (1057)
Q Consensus 268 ~~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~h 347 (1057)
..-.|..+. ..|.+|.+|+++.+++. ||||||.+ ...++++++||+.+++|..++ ++|.+|.+|
T Consensus 32 ~~~~W~~~~-----~~p~~r~~~~~~~~~~~-----lyv~GG~~----~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~ 95 (306)
T 3ii7_A 32 KDYSWTDIR-----CPFEKRRDAACVFWDNV-----VYILGGSQ----LFPIKRMDCYNVVKDSWYSKL--GPPTPRDSL 95 (306)
T ss_dssp TTTEEEECC-----CCSCCCBSCEEEEETTE-----EEEECCBS----SSBCCEEEEEETTTTEEEEEE--CCSSCCBSC
T ss_pred CCCCEecCC-----CCCcccceeEEEEECCE-----EEEEeCCC----CCCcceEEEEeCCCCeEEECC--CCCccccce
Confidence 344676552 23457999999999877 99999987 246899999999999999997 789999999
Q ss_pred EEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcc----cceEE
Q 036185 348 TSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTI----FSSLH 423 (1057)
Q Consensus 348 s~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~----~~~v~ 423 (1057)
++++++++||++||.+.....++++++||+.+++|+.++ ++|.+|..|++++++++||++||.++... +++++
T Consensus 96 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 96 AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEE
T ss_pred eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEE
Confidence 999999999999999755678899999999999999996 79999999999999999999999877654 89999
Q ss_pred EEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE
Q 036185 424 VLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY 503 (1057)
Q Consensus 424 ~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~ 503 (1057)
+||+.+++|+.+++ +|.+|.+|+++.++++||++||.++...++++++||+.+++|+.+ +.+|.+|..|+++.+
T Consensus 173 ~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 173 VYDPATETWTELCP---MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMV---SPMPWKGVTVKCAAV 246 (306)
T ss_dssp EEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEEC---CCCSCCBSCCEEEEE
T ss_pred EeCCCCCeEEECCC---ccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEEC---CCCCCCccceeEEEE
Confidence 99999999999975 688999999999999999999998878889999999999999998 678999999999999
Q ss_pred CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeC
Q 036185 504 KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVD 554 (1057)
Q Consensus 504 ~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~ 554 (1057)
+++||++||++.....+++++||+++++|+.++.++ .++..++++++.
T Consensus 247 ~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~~~ 294 (306)
T 3ii7_A 247 GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVR---AFPVTSCLICVV 294 (306)
T ss_dssp TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEE---CCSCTTCEEEEE
T ss_pred CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcc---cccceeEEEEEC
Confidence 999999999988778899999999999999997654 345556655543
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=6.2e-37 Score=381.27 Aligned_cols=284 Identities=20% Similarity=0.324 Sum_probs=242.3
Q ss_pred CcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEec-c---CCCCCCccccEEEEE--CC
Q 036185 281 PVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIH-T---EGSPSPRLGHTSSLI--GD 354 (1057)
Q Consensus 281 ~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~-~---~~~P~~R~~hs~v~~--~~ 354 (1057)
+..+..|+||+++ +++. ||||||.+. ..++++++||+.+++|..++ . ..+|.+|.+|+++++ ++
T Consensus 383 ~~~p~rr~g~~~~-~~~~-----iyv~GG~~~----~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~ 452 (695)
T 2zwa_A 383 ECPINRKFGDVDV-AGND-----VFYMGGSNP----YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN 452 (695)
T ss_dssp CCTTCCBSCEEEE-CSSC-----EEEECCBSS----SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT
T ss_pred CCCCCCceeEEEE-ECCE-----EEEECCCCC----CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC
Confidence 3345567777655 6666 999999875 46799999999999999997 3 258999999999999 99
Q ss_pred EEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEE
Q 036185 355 HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWK 433 (1057)
Q Consensus 355 ~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (1057)
+|||+||.+.....++++|+||+.+++|+.++ ++|.+|+.|+++++ +++|||+||.++.. ++++||+.+++|+
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFK 526 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEE
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceE
Confidence 99999999876668999999999999999996 89999999999997 99999999998765 8999999999999
Q ss_pred EeecCCCCCCCcceeEEEEEC---CEEEEEecCCC--CcccCcEEEEECCCCe------EEEeeccCCCCCCceeeEEEE
Q 036185 434 ELLINGEGPCARHSHSMLAYG---SRLYMFGGYNG--EKALGDLYTFDVHACL------WKKEDIAARSPHARFSHTMFL 502 (1057)
Q Consensus 434 ~~~~~g~~P~~r~~~s~~~~~---~~lyv~GG~~~--~~~~~~l~~yd~~t~~------W~~v~~~~~~P~~R~~hs~~~ 502 (1057)
.+++.+.+|.+|.+|++++++ ++||++||.+. ...++++++||+.+++ |+.+.. .++.+|.+|+++.
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~~ 604 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIKY 604 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEEE
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEEE
Confidence 999877789999999988877 89999999853 3678999999999999 888744 1358899999999
Q ss_pred EC-CEEEEEeccCCCC---CCCeEEEEECCCCeEEEeeccCC----CCCcccceEEEEeCC-EEEEEeCCCccccCCcee
Q 036185 503 YK-NYLGLFGGCPVRQ---NYQELSLLDLQLHIWKHLKLNYV----CKELFVRSTANVVDD-DLIMIGGGAACYAFGTKF 573 (1057)
Q Consensus 503 ~~-~~l~i~GG~~~~~---~~~~i~~yd~~~~~W~~v~~~~~----~~~~~~~~~a~~~~~-~iyi~GGg~~~~~~g~~~ 573 (1057)
++ ++|||+||++... ..+++++||+.+++|+.++.+.. +++.+.+|+++.+++ +|||+||+.+||+||+++
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfsfGt~~ 684 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYGFGSVT 684 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTTSCEEE
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcCccccc
Confidence 99 9999999987553 58899999999999997643321 123456688888776 999999999999999999
Q ss_pred cccEEeecc
Q 036185 574 SEPVKINLS 582 (1057)
Q Consensus 574 ~~~~~~dl~ 582 (1057)
++.|.+|+.
T Consensus 685 n~i~~ldl~ 693 (695)
T 2zwa_A 685 NVGLKLIAI 693 (695)
T ss_dssp CCCEEEEEC
T ss_pred cceEEEEEE
Confidence 999999984
No 15
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6e-36 Score=336.18 Aligned_cols=259 Identities=17% Similarity=0.289 Sum_probs=228.4
Q ss_pred ceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCC-CCCcccccEEEEeCCCCcEEEeccCCCCCCcccc
Q 036185 269 GLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGM-GRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGH 347 (1057)
Q Consensus 269 ~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~-g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~h 347 (1057)
...|..+ +..|.+|.+|+++.+++. ||||||.... ......+++++||+.+++|+.++ ++|.+|.+|
T Consensus 48 ~~~W~~~-----~~~p~~r~~~~~~~~~~~-----lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r~~~ 115 (308)
T 1zgk_A 48 NGTWLRL-----ADLQVPRSGLAGCVVGGL-----LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA--PMSVPRNRI 115 (308)
T ss_dssp TTEEEEC-----CCCSSCCBSCEEEEETTE-----EEEECCEEEETTEEEECCCEEEEETTTTEEEECC--CCSSCCBTC
T ss_pred CCeEeEC-----CCCCcccccceEEEECCE-----EEEECCCcCCCCCCeecceEEEECCCCCeEeECC--CCCcCcccc
Confidence 4467665 234557999999999776 9999998310 12356799999999999999987 789999999
Q ss_pred EEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEEC
Q 036185 348 TSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDT 427 (1057)
Q Consensus 348 s~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~ 427 (1057)
++++++++||++||... ...++++++||+.+++|+.++ ++|.+|..|++++++++||++||.++...++++++||+
T Consensus 116 ~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 116 GVGVIDGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVA---PMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp EEEEETTEEEEECCEET-TEECCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEET
T ss_pred EEEEECCEEEEEcCCCC-CcccccEEEECCCCCeEeECC---CCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeC
Confidence 99999999999999876 467899999999999999997 78999999999999999999999988777999999999
Q ss_pred CCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEE
Q 036185 428 DTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYL 507 (1057)
Q Consensus 428 ~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l 507 (1057)
.+++|+.++. +|.+|..|+++.++++||++||.++...++++++||+.+++|+.+ .++|.+|..|+++.++++|
T Consensus 192 ~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i 265 (308)
T 1zgk_A 192 ERNEWRMITA---MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV---APMKHRRSALGITVHQGRI 265 (308)
T ss_dssp TTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEE
T ss_pred CCCeEeeCCC---CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC---CCCCCCccceEEEEECCEE
Confidence 9999999965 688999999999999999999998887899999999999999997 5789999999999999999
Q ss_pred EEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE
Q 036185 508 GLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV 552 (1057)
Q Consensus 508 ~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~ 552 (1057)
|++||.+.....+++++||+++++|+.++.++ .+|..+++++
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p---~~r~~~~~~~ 307 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEVTRMT---SGRSGVGVAV 307 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEEEECS---SCCBSCEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeecCCCC---CCcccceeEe
Confidence 99999988778899999999999999997553 4566777665
No 16
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-36 Score=339.94 Aligned_cols=269 Identities=16% Similarity=0.248 Sum_probs=229.4
Q ss_pred CceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCC--CC-CcccccEEEEeCCCCcEEEeccCCCCCCc
Q 036185 268 CGLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGM--GR-HARRNDLFLLDPLQGTIKAIHTEGSPSPR 344 (1057)
Q Consensus 268 ~~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~--g~-~~~~~d~~~yd~~t~~W~~l~~~~~P~~R 344 (1057)
..-.|..... ..+.+|.+|+++.+++. ||||||.... +. ....+++++||+.+++|..++ ++|.+|
T Consensus 32 ~~~~W~~~~~----~~~~~r~~~~~~~~~~~-----lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~r 100 (318)
T 2woz_A 32 MENECYLTAL----AEQIPRNHSSIVTQQNQ-----VYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP--PLPSAR 100 (318)
T ss_dssp TTTEEEEEEE----CTTSCSSEEEEECSSSC-----EEEEESSCC-------CCCBEEEEEETTTTEEEECS--CBSSCB
T ss_pred CCCceecccC----CccCCccceEEEEECCE-----EEEECCcccCccccCCCccccEEEEeCCCCcEEECC--CCCccc
Confidence 3446765321 23457999999988777 9999996421 11 123456999999999999987 889999
Q ss_pred cccEEEEECCEEEEEcccCC-CCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCC-CcccceE
Q 036185 345 LGHTSSLIGDHMFIIGGRAD-PLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNN-DTIFSSL 422 (1057)
Q Consensus 345 ~~hs~v~~~~~Iyv~GG~~~-~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~-~~~~~~v 422 (1057)
.+|++++++++||++||... ....++++|+||+.+++|+.++ ++|.+|..|++++++++||++||.+. ...++++
T Consensus 101 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 177 (318)
T 2woz_A 101 CLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK---NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRV 177 (318)
T ss_dssp CSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC---CCSSCEESCEEEEETTEEEEECCEESSSCBCCCE
T ss_pred cccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC---CCCCcccccEEEEECCEEEEEcCCCCCCCccceE
Confidence 99999999999999999863 3567899999999999999997 78999999999999999999999854 5678999
Q ss_pred EEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEE
Q 036185 423 HVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFL 502 (1057)
Q Consensus 423 ~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~ 502 (1057)
++||+.+++|+.+++ +|.+|..|+++.++++||++||.++...++++++||+.+++|+.+ +++|.+|..|+++.
T Consensus 178 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~ 251 (318)
T 2woz_A 178 FIYNPKKGDWKDLAP---MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVM---TEFPQERSSISLVS 251 (318)
T ss_dssp EEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEEC---CCCSSCCBSCEEEE
T ss_pred EEEcCCCCEEEECCC---CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEEC---CCCCCcccceEEEE
Confidence 999999999999975 689999999999999999999998877889999999999999998 67899999999999
Q ss_pred ECCEEEEEeccCCC---------CCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEe
Q 036185 503 YKNYLGLFGGCPVR---------QNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIG 561 (1057)
Q Consensus 503 ~~~~l~i~GG~~~~---------~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~G 561 (1057)
++++||++||.+.. ...+++|+||+++++|+.+ .+.++..|++++++++|||+.
T Consensus 252 ~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 252 LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEEEEGGG
T ss_pred ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-----cccccccccceeeCCEEEEEE
Confidence 99999999998642 3478999999999999998 234577888899999999874
No 17
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=329.54 Aligned_cols=258 Identities=16% Similarity=0.241 Sum_probs=229.1
Q ss_pred ceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCc---EEEeccCCCCCCcc
Q 036185 269 GLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGT---IKAIHTEGSPSPRL 345 (1057)
Q Consensus 269 ~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~---W~~l~~~~~P~~R~ 345 (1057)
.-.|..+. ..|.+|.+|+++.+++. ||+|||... ....+++++||+.+++ |+.++ ++|.+|.
T Consensus 40 ~~~W~~~~-----~~p~~r~~~~~~~~~~~-----l~v~GG~~~---~~~~~~~~~~d~~~~~~~~W~~~~--~~p~~r~ 104 (301)
T 2vpj_A 40 TQEWSFLP-----SITRKRRYVASVSLHDR-----IYVIGGYDG---RSRLSSVECLDYTADEDGVWYSVA--PMNVRRG 104 (301)
T ss_dssp TTEEEECC-----CCSSCCBSCEEEEETTE-----EEEECCBCS---SCBCCCEEEEETTCCTTCCCEEEC--CCSSCCB
T ss_pred CCeEEeCC-----CCChhhccccEEEECCE-----EEEEcCCCC---CccCceEEEEECCCCCCCeeEECC--CCCCCcc
Confidence 44676654 23457999999998877 999999874 3468999999999999 99997 8899999
Q ss_pred ccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEE
Q 036185 346 GHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVL 425 (1057)
Q Consensus 346 ~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~y 425 (1057)
+|++++++++||++||..+ ...++++++||+.+++|+.++ ++|.+|..|++++++++||++||.++...++++++|
T Consensus 105 ~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp SCEEEEETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEE
T ss_pred ceeEEEECCEEEEEcccCC-CcccceEEEEcCCCCeEEECC---CCCCCcccceEEEECCEEEEECCCCCCcccceEEEE
Confidence 9999999999999999976 356899999999999999997 789999999999999999999999888889999999
Q ss_pred ECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECC
Q 036185 426 DTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKN 505 (1057)
Q Consensus 426 D~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~ 505 (1057)
|+.+++|+.+++ +|.+|..|+++.++++||++||.++...++++++||+.+++|+.+ +.+|.+|..|+++.+++
T Consensus 181 d~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~ 254 (301)
T 2vpj_A 181 DPHTGHWTNVTP---MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTV---TSMTTPRCYVGATVLRG 254 (301)
T ss_dssp ETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETT
T ss_pred eCCCCcEEeCCC---CCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEEC---CCCCCcccceeEEEECC
Confidence 999999999965 688999999999999999999998877789999999999999998 57899999999999999
Q ss_pred EEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeC
Q 036185 506 YLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVD 554 (1057)
Q Consensus 506 ~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~ 554 (1057)
+||++||.+.....+++++||+++++|+.++.++ .++..|+++++.
T Consensus 255 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~---~~r~~~~~~~~~ 300 (301)
T 2vpj_A 255 RLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMG---TQRCDAGVCVLR 300 (301)
T ss_dssp EEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEE---EEEESCEEEEEE
T ss_pred EEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCC---cccccceEEEeC
Confidence 9999999887777789999999999999997543 356777777653
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.2e-35 Score=338.31 Aligned_cols=283 Identities=19% Similarity=0.266 Sum_probs=225.1
Q ss_pred CcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCC--CCcEEEeccCCCC-CCccccEEEEECCEEE
Q 036185 281 PVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPL--QGTIKAIHTEGSP-SPRLGHTSSLIGDHMF 357 (1057)
Q Consensus 281 ~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~--t~~W~~l~~~~~P-~~R~~hs~v~~~~~Iy 357 (1057)
+..|.+|.+|+++.+++. ||||||... +++++||+. +++|..++ ++| .+|.+|++++++++||
T Consensus 4 ~~lP~~r~~~~~~~~~~~-----iyv~GG~~~-------~~~~~~d~~~~~~~W~~~~--~~p~~~R~~~~~~~~~~~ly 69 (357)
T 2uvk_A 4 PETPVPFKSGTGAIDNDT-----VYIGLGSAG-------TAWYKLDTQAKDKKWTALA--AFPGGPRDQATSAFIDGNLY 69 (357)
T ss_dssp CCCSSCCCSCEEEEETTE-----EEEECGGGT-------TCEEEEETTSSSCCEEECC--CCTTCCCBSCEEEEETTEEE
T ss_pred CCCCccccceEEEEECCE-----EEEEeCcCC-------CeEEEEccccCCCCeeECC--CCCCCcCccceEEEECCEEE
Confidence 345567899999988776 999999764 489999998 48999987 788 8999999999999999
Q ss_pred EEccc-C---CCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCc----------------
Q 036185 358 IIGGR-A---DPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDT---------------- 417 (1057)
Q Consensus 358 v~GG~-~---~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~---------------- 417 (1057)
||||. . .....++++|+||+.+++|+.++... |.+|..|++++++++||++||.+...
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~ 147 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA--PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDST 147 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC--SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHH
T ss_pred EEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC--CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCccc
Confidence 99998 2 23457899999999999999998322 48999999999999999999987532
Q ss_pred ------------------ccceEEEEECCCCcEEEeecCCCCCCCcc-eeEEEEECCEEEEEecCCCC-cccCcEEEEEC
Q 036185 418 ------------------IFSSLHVLDTDTLQWKELLINGEGPCARH-SHSMLAYGSRLYMFGGYNGE-KALGDLYTFDV 477 (1057)
Q Consensus 418 ------------------~~~~v~~yD~~t~~W~~~~~~g~~P~~r~-~~s~~~~~~~lyv~GG~~~~-~~~~~l~~yd~ 477 (1057)
.++++++||+.+++|+.+.+ +|.+|. +|+++.++++||++||.++. ..+++++.||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 148 AIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE---SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp HHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE---CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred chhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC---CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 46899999999999999976 466554 49999999999999998643 45789999987
Q ss_pred --CCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCC-----------------CCCCeEEEEECCCCeEEEeecc
Q 036185 478 --HACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVR-----------------QNYQELSLLDLQLHIWKHLKLN 538 (1057)
Q Consensus 478 --~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~-----------------~~~~~i~~yd~~~~~W~~v~~~ 538 (1057)
.+++|+.+... +.|.+|.+|+++.++++|||+||.+.. ...+++++||+++++|+.+..+
T Consensus 225 d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 303 (357)
T 2uvk_A 225 TGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL 303 (357)
T ss_dssp C---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC
T ss_pred cCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC
Confidence 89999998432 334456788999999999999996432 2236899999999999999754
Q ss_pred CCCCCcccceEEEEeCCEEEEEeCCCccccCCceecccEEeeccccccccC
Q 036185 539 YVCKELFVRSTANVVDDDLIMIGGGAACYAFGTKFSEPVKINLSSVPLMSL 589 (1057)
Q Consensus 539 ~~~~~~~~~~~a~~~~~~iyi~GGg~~~~~~g~~~~~~~~~dl~~~~~~~~ 589 (1057)
+ .+|..++++.++++|||+||... .+...++.+.+++..-.|...
T Consensus 304 p---~~r~~~~~~~~~~~i~v~GG~~~---~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 304 S---QGRAYGVSLPWNNSLLIIGGETA---GGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp S---SCCBSSEEEEETTEEEEEEEECG---GGCEEEEEEEEEC-CCSCEEE
T ss_pred C---CCcccceeEEeCCEEEEEeeeCC---CCCEeeeEEEEEEcCcEeEee
Confidence 4 45777888999999999999653 234467888888876665543
No 19
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=332.95 Aligned_cols=265 Identities=17% Similarity=0.208 Sum_probs=229.4
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccC-----CCCCCCCcEEEEE
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRA-----DPLNILSDVWVFN 376 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~-----~~~~~~~~v~~yd 376 (1057)
+.||+||| +++++||+.+++|.. +..+.|.+|.+|++++++++||++||.. ......+++|+||
T Consensus 5 ~~l~~~GG----------~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d 73 (315)
T 4asc_A 5 DLIFMISE----------EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFD 73 (315)
T ss_dssp EEEEEEET----------TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEE
T ss_pred eEEEEEcC----------CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEec
Confidence 35999999 579999999999987 3234477999999999999999999962 2234456799999
Q ss_pred CCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccC---CCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 036185 377 MAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLN---NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY 453 (1057)
Q Consensus 377 ~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~---~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~ 453 (1057)
+.+++|+.++ ++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.+++ +|.+|.+|+++.+
T Consensus 74 ~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~ 147 (315)
T 4asc_A 74 HLDSEWLGMP---PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVVYGHTVLSH 147 (315)
T ss_dssp TTTTEEEECC---CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEE
T ss_pred CCCCeEEECC---CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcccceeEEEE
Confidence 9999999987 7999999999999999999999975 36788999999999999999875 6899999999999
Q ss_pred CCEEEEEecC-CCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 454 GSRLYMFGGY-NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 454 ~~~lyv~GG~-~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
+++||++||. ++...++++++||+.+++|+.+ .++|.+|..|+++.++++||++||.+.....+++++||+++++|
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL---APMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEEC---CCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEEC---CCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 9999999999 5667889999999999999997 57899999999999999999999998777788999999999999
Q ss_pred EEeeccCCCCCcccceEEEEeCCEEEEEeCCCcccc-C----CceecccEEeeccccccccC
Q 036185 533 KHLKLNYVCKELFVRSTANVVDDDLIMIGGGAACYA-F----GTKFSEPVKINLSSVPLMSL 589 (1057)
Q Consensus 533 ~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~~~~-~----g~~~~~~~~~dl~~~~~~~~ 589 (1057)
+.++.+ +.+|..++++.++++||++||...... . ...+++.+.+|+.+..|...
T Consensus 225 ~~~~~~---p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 225 APFEAF---PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp EEECCC---SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred EECCCC---CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 999753 345778899999999999999643111 1 14567889999999999887
No 20
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-34 Score=324.37 Aligned_cols=264 Identities=17% Similarity=0.235 Sum_probs=226.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCC-----CCCCCcEEEEEC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADP-----LNILSDVWVFNM 377 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~-----~~~~~~v~~yd~ 377 (1057)
.||+|||. ++++||+.+++|...+ .+.|.+|.+|+++.++++||++||.... ....+++++||+
T Consensus 17 ~i~~~GG~----------~~~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~ 85 (318)
T 2woz_A 17 LILLVNDT----------AAVAYDPMENECYLTA-LAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDN 85 (318)
T ss_dssp EEEEECSS----------EEEEEETTTTEEEEEE-ECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEET
T ss_pred hhhhcccc----------ceEEECCCCCceeccc-CCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeC
Confidence 59999993 3799999999999843 3456899999999999999999996311 123456999999
Q ss_pred CCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccC--CCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECC
Q 036185 378 AKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLN--NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~--~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~ 455 (1057)
.+++|+.++ ++|.+|..|++++++++||++||.+ +...++++++||+.+++|+.+++ +|.+|.+|+++..++
T Consensus 86 ~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~ 159 (318)
T 2woz_A 86 VSSEWVGLP---PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---LPIKVYGHNVISHNG 159 (318)
T ss_dssp TTTEEEECS---CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---CSSCEESCEEEEETT
T ss_pred CCCcEEECC---CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---CCCcccccEEEEECC
Confidence 999999996 8999999999999999999999986 46678999999999999999975 688999999999999
Q ss_pred EEEEEecCC-CCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 456 RLYMFGGYN-GEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 456 ~lyv~GG~~-~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
+||++||.+ +...++++++||+.+++|+.+ .++|.+|..|+++.++++||++||.+.....+++++||+++++|+.
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDL---APMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEEEE---CCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEEEC---CCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 999999984 456789999999999999998 5789999999999999999999998877678899999999999999
Q ss_pred eeccCCCCCcccceEEEEeCCEEEEEeCCCccccC-----CceecccEEeeccccccccC
Q 036185 535 LKLNYVCKELFVRSTANVVDDDLIMIGGGAACYAF-----GTKFSEPVKINLSSVPLMSL 589 (1057)
Q Consensus 535 v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~~~~~-----g~~~~~~~~~dl~~~~~~~~ 589 (1057)
++.++ .++..|+++.++++||++||....... ....++.+.+|+.+..|...
T Consensus 237 ~~~~p---~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 237 MTEFP---QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp CCCCS---SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCCCC---CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 87543 457788999999999999997532111 13467889999999889876
No 21
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=100.00 E-value=2.2e-34 Score=318.75 Aligned_cols=260 Identities=30% Similarity=0.475 Sum_probs=212.5
Q ss_pred CchHHhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCCCccccceEEEeeCCceEEE
Q 036185 783 LSARLLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKH 862 (1057)
Q Consensus 783 ~~~~~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~r~~~~~~l~G~~~~~~~ 862 (1057)
+|+++++.+|.+||+|||+++++++ . .++...+.|.+++.+.++++.|+.++++ .+++|..+.++++|+...+++
T Consensus 18 ~~~~~~d~lp~~~d~~g~~~vv~~~-~---~~~~~~~~i~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~~l~G~~~~~~~ 92 (278)
T 2frn_A 18 LPEELVKLLPKRWVRIGDVLLLPLR-P---ELEPYKHRIAEVYAEVLGVKTVLRKGHI-HGETRKPDYELLYGSDTVTVH 92 (278)
T ss_dssp -CCCTTTCSCSCCEEETTEEECC---C---CSCSCCTHHHHHHHHHHTCSEEEECC-----------CEEEECSCCEEEE
T ss_pred CChhHhhhcCceEEEECCEEEEeCC-h---hHHHHHHHHHHHHHHhcCCCEEEEeCCc-cCCccccceEEEECCCCEEEE
Confidence 5778888899999999999999983 2 2334456677777776678888877654 367888999999999877778
Q ss_pred EeCCEEEEEecceeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc
Q 036185 863 CENGILYSFDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN 942 (1057)
Q Consensus 863 ~e~gi~~~~d~~~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N 942 (1057)
.|+|++|.+|+.++||++++..+|.++...+.+|++|||+|||+|+|++.+|+ .++.+|+|+|+||.|++.+++|++.|
T Consensus 93 ~e~g~~f~~d~~~~~f~~~~~~~~~~l~~~~~~~~~VLDlgcG~G~~~~~la~-~~~~~V~~vD~s~~~~~~a~~n~~~n 171 (278)
T 2frn_A 93 VENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAV-YGKAKVIAIEKDPYTFKFLVENIHLN 171 (278)
T ss_dssp EETTEEEEEETTTSCCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTHHHHHH-HTCCEEEEECCCHHHHHHHHHHHHHT
T ss_pred EECCEEEEEEccceeEcCCcHHHHHHHHHhCCCCCEEEEecccCCHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999984 45558999999999999999999999
Q ss_pred CCCccEEEEeCCccccCCCCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhc
Q 036185 943 SVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSE 1022 (1057)
Q Consensus 943 ~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 1022 (1057)
++.++++++++|+.+++....||+|+++|++.....+..+.++|+ +||+++++++++.... ..+..+.+.+++++.
T Consensus 172 ~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~---~~~~~~~i~~~~~~~ 247 (278)
T 2frn_A 172 KVEDRMSAYNMDNRDFPGENIADRILMGYVVRTHEFIPKALSIAK-DGAIIHYHNTVPEKLM---PREPFETFKRITKEY 247 (278)
T ss_dssp TCTTTEEEECSCTTTCCCCSCEEEEEECCCSSGGGGHHHHHHHEE-EEEEEEEEEEEEGGGT---TTTTHHHHHHHHHHT
T ss_pred CCCceEEEEECCHHHhcccCCccEEEECCchhHHHHHHHHHHHCC-CCeEEEEEEeeccccc---cccHHHHHHHHHHHc
Confidence 998779999999999887778999999995556788999999998 7999999999974322 123356778888889
Q ss_pred CCceeeeeeEEEEeEeecCCceEEEEEEEEee
Q 036185 1023 GHRWEVTIEHIERVKWYAPHIRHLVADVGCRQ 1054 (1057)
Q Consensus 1023 g~~~~~~~~~~~~Vk~~aP~~~h~~~d~~~~~ 1054 (1057)
|+.+ ++.+.++|++|+|+.||+++|+++..
T Consensus 248 G~~~--~~~~~~~v~~~~p~~~h~~~d~~v~r 277 (278)
T 2frn_A 248 GYDV--EKLNELKIKRYAPGVWHVVLDLRVFK 277 (278)
T ss_dssp TCEE--EEEEEEEEEEETTTEEEEEEEEEEEC
T ss_pred CCee--EEeeeEEEEecCCCceEEEEEEEEec
Confidence 8764 56678889999999999999999874
No 22
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=2.1e-31 Score=305.16 Aligned_cols=240 Identities=17% Similarity=0.196 Sum_probs=196.1
Q ss_pred ccccceEEEEECCccCCcEEEEEcccCC--CCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEccc
Q 036185 285 LFLWGHSACILGNSINDSQILVFGGFGG--MGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGR 362 (1057)
Q Consensus 285 ~~R~ghsa~~~~~~~~~~~lyvfGG~~~--~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~ 362 (1057)
.+|.+|+++.+++. ||||||... .+....++++++||+.+++|+.++... |.+|.+|++++++++|||+||.
T Consensus 54 ~~R~~~~~~~~~~~-----lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 54 GPRDQATSAFIDGN-----LYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp CCCBSCEEEEETTE-----EEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEECC
T ss_pred CcCccceEEEECCE-----EEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEeCc
Confidence 57999999999877 999999822 223467899999999999999998333 4999999999999999999998
Q ss_pred CCCC---------------------------------CCCCcEEEEECCCCcEEEeeccCCCCCccc-ceEEEEECCEEE
Q 036185 363 ADPL---------------------------------NILSDVWVFNMAKSKWTLLECSGSVFQPRH-RHAAAVIGSKIY 408 (1057)
Q Consensus 363 ~~~~---------------------------------~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~-~hsa~~~~~~iy 408 (1057)
+... ..++++++||+.+++|+.+. ++|.+|. .|++++++++||
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iy 204 (357)
T 2uvk_A 128 NQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTW 204 (357)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTEEE
T ss_pred CCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEECCEEE
Confidence 6421 35789999999999999997 6776654 599999999999
Q ss_pred EEcccCCC-cccceEEEEEC--CCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCC-----------------Ccc
Q 036185 409 VFGGLNND-TIFSSLHVLDT--DTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNG-----------------EKA 468 (1057)
Q Consensus 409 v~GG~~~~-~~~~~v~~yD~--~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~-----------------~~~ 468 (1057)
|+||.+.. ...++++.||+ .+++|+.+..+ +.|.+|.+|+++.++++||++||.+. ...
T Consensus 205 v~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~ 283 (357)
T 2uvk_A 205 LINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKK 283 (357)
T ss_dssp EECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCC
T ss_pred EEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccc
Confidence 99998653 45788999987 99999999775 34566788999999999999999642 233
Q ss_pred cCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCC-CCeEEEEECCCCeEEEeec
Q 036185 469 LGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQN-YQELSLLDLQLHIWKHLKL 537 (1057)
Q Consensus 469 ~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~-~~~i~~yd~~~~~W~~v~~ 537 (1057)
++++++||+.+++|+.+ +.+|.+|..|+++.++++|||+||++.... .+++++|++++++|....+
T Consensus 284 ~~~~~~yd~~~~~W~~~---~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 284 SYSTDIHLWHNGKWDKS---GELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNL 350 (357)
T ss_dssp EECCEEEECC---CEEE---EECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC-
T ss_pred eeeEEEEecCCCceeeC---CCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeec
Confidence 46899999999999998 568899999999999999999999876543 6899999999999998764
No 23
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=2.1e-30 Score=285.72 Aligned_cols=248 Identities=29% Similarity=0.459 Sum_probs=183.6
Q ss_pred CCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCCCccccceEEEeeCCceEEEEeCCEEEE
Q 036185 791 LPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDNGWVKHCENGILYS 870 (1057)
Q Consensus 791 lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~r~~~~~~l~G~~~~~~~~e~gi~~~ 870 (1057)
+|++||+|||++++|+.+.. + .| +++.+..+++.|+.+.....+.+|..+.++++|+...+.+.|+|++|.
T Consensus 24 ~~~~~d~~g~~~v~~~~~~~----~----~i-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~l~G~~~~~~~~e~g~~f~ 94 (272)
T 3a27_A 24 MGIKYQKIGDVVIVKKELSE----D----EI-REIVKRTKCKAILLYTTQITGEFRTPHVKILYGKETETIHKEYGCLFK 94 (272)
T ss_dssp ---CCEEETTEEEC--------------------------CCSEEEEC----------CCEEEECSCCEEEEEETTEEEE
T ss_pred CCCcceEECCEEEEeCCchH----H----HH-HHHHhCCCceEEEEcCCCCCCcccccceEEEeCCCcEEEEEECCEEEE
Confidence 79999999999999988532 1 33 444444445556554322236678889999999985556789999999
Q ss_pred EecceeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEE
Q 036185 871 FDATKCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIV 950 (1057)
Q Consensus 871 ~d~~~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~ 950 (1057)
+++..+||++++..++.+++..+.++++|||+|||+|+|++++|+..++.+|+|+|+||.|++.+++|++.|+++ ++.+
T Consensus 95 ~~~~~~f~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~ 173 (272)
T 3a27_A 95 LDVAKIMWSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLN-NVIP 173 (272)
T ss_dssp EETTTSCCCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCS-SEEE
T ss_pred EechhEEECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEE
Confidence 999999999999999999988888999999999999999999996545668999999999999999999999997 6899
Q ss_pred EeCCccccCC-CCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeee
Q 036185 951 LEGDNRFTAP-KGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVT 1029 (1057)
Q Consensus 951 ~~~D~~~~~~-~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 1029 (1057)
+++|+.++ + ...||+|++||+......+..+++.|+ +||+++++++....+.... +.+.++.+.+..|+ +++
T Consensus 174 ~~~d~~~~-~~~~~~D~Vi~d~p~~~~~~l~~~~~~Lk-pgG~l~~s~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~ 246 (272)
T 3a27_A 174 ILADNRDV-ELKDVADRVIMGYVHKTHKFLDKTFEFLK-DRGVIHYHETVAEKIMYER---PIERLKFYAEKNGY--KLI 246 (272)
T ss_dssp EESCGGGC-CCTTCEEEEEECCCSSGGGGHHHHHHHEE-EEEEEEEEEEEEGGGTTTH---HHHHHHHHHHHTTE--EEE
T ss_pred EECChHHc-CccCCceEEEECCcccHHHHHHHHHHHcC-CCCEEEEEEcCcccccccc---HHHHHHHHHHHhCC--eeE
Confidence 99999988 5 457999999994455777888899998 7999999999886543222 23334444444554 446
Q ss_pred eeEEEEeEeecCCceEEEEEEEEeee
Q 036185 1030 IEHIERVKWYAPHIRHLVADVGCRQI 1055 (1057)
Q Consensus 1030 ~~~~~~Vk~~aP~~~h~~~d~~~~~~ 1055 (1057)
+.+++.|+.|+|+.+|+|+||++.++
T Consensus 247 ~~~~~~v~~~~p~~~~~~~d~~~~~~ 272 (272)
T 3a27_A 247 DYEVRKIKKYAPGVWHVVVDAKFERI 272 (272)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EeEEEEEEEECCCCCEEEEEEEEecC
Confidence 67889999999999999999999874
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=5.6e-28 Score=300.72 Aligned_cols=238 Identities=14% Similarity=0.188 Sum_probs=202.5
Q ss_pred CCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEee-c--cCCCCCcccceEEEEE--CCEEEEEccc
Q 036185 339 GSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLE-C--SGSVFQPRHRHAAAVI--GSKIYVFGGL 413 (1057)
Q Consensus 339 ~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~-~--~g~~p~~R~~hsa~~~--~~~iyv~GG~ 413 (1057)
..|.+|++|+++ ++++|||+||... ..++++|+||+.+++|+.++ . .+.+|.+|.+|+++++ +++|||+||.
T Consensus 384 ~~p~rr~g~~~~-~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~ 460 (695)
T 2zwa_A 384 CPINRKFGDVDV-AGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR 460 (695)
T ss_dssp CTTCCBSCEEEE-CSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB
T ss_pred CCCCCceeEEEE-ECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC
Confidence 566667766554 8999999999876 67899999999999999998 3 3568999999999999 9999999999
Q ss_pred CCCc-ccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCC
Q 036185 414 NNDT-IFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARS 491 (1057)
Q Consensus 414 ~~~~-~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~ 491 (1057)
++.. .++++|+||+.+++|+.+++ +|.+|.+|+++.+ +++||++||.++.. ++++||+.+++|+.+...+.+
T Consensus 461 ~~~~~~~~dv~~yd~~t~~W~~~~~---~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~ 534 (695)
T 2zwa_A 461 KAPHQGLSDNWIFDMKTREWSMIKS---LSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEF 534 (695)
T ss_dssp SSTTCBCCCCEEEETTTTEEEECCC---CSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGG
T ss_pred CCCCCccccEEEEeCCCCcEEECCC---CCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCC
Confidence 8754 78999999999999999965 6899999999997 99999999997655 899999999999999776779
Q ss_pred CCCceeeEEEEEC---CEEEEEeccCCC--CCCCeEEEEECCCCe------EEEeeccCCCCCcccceEEEEeC-CEEEE
Q 036185 492 PHARFSHTMFLYK---NYLGLFGGCPVR--QNYQELSLLDLQLHI------WKHLKLNYVCKELFVRSTANVVD-DDLIM 559 (1057)
Q Consensus 492 P~~R~~hs~~~~~---~~l~i~GG~~~~--~~~~~i~~yd~~~~~------W~~v~~~~~~~~~~~~~~a~~~~-~~iyi 559 (1057)
|.+|.+|+++.++ ++||++||.+.. ...+++|+||+.+++ |+.+..+ ++.+|..|++++++ ++|||
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~~~~~~~~iyv 612 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQIKYITPRKLLI 612 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEEEEEETTEEEE
T ss_pred CCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceEEEeCCCEEEE
Confidence 9999999988876 899999998543 568899999999999 8988753 23567888999999 99999
Q ss_pred EeCCCccccCCceecccEEeecccccccc
Q 036185 560 IGGGAACYAFGTKFSEPVKINLSSVPLMS 588 (1057)
Q Consensus 560 ~GGg~~~~~~g~~~~~~~~~dl~~~~~~~ 588 (1057)
+||...... ....++.+.+|+.+..|..
T Consensus 613 ~GG~~~~~~-~~~~~~v~~yd~~t~~W~~ 640 (695)
T 2zwa_A 613 VGGTSPSGL-FDRTNSIISLDPLSETLTS 640 (695)
T ss_dssp ECCBCSSCC-CCTTTSEEEEETTTTEEEE
T ss_pred ECCccCCCC-CCCCCeEEEEECCCCeEEE
Confidence 999643211 1346788899999888873
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=5.2e-27 Score=291.09 Aligned_cols=276 Identities=12% Similarity=0.105 Sum_probs=210.2
Q ss_pred CcCCCceeeEEEEecCCCcCcccccceEEEEEC-CccCCcEEEEEcccCCCC---CCcccccEEEEeCCCCcEEEeccCC
Q 036185 264 GVPSCGLSVSRIVIAGEPVEKLFLWGHSACILG-NSINDSQILVFGGFGGMG---RHARRNDLFLLDPLQGTIKAIHTEG 339 (1057)
Q Consensus 264 ~~~~~~l~w~~l~~~~~~~~~~~R~ghsa~~~~-~~~~~~~lyvfGG~~~~g---~~~~~~d~~~yd~~t~~W~~l~~~~ 339 (1057)
.+....-.|..+. +++|.+|+++++. ++ +||++||..... .....+++++||+.+++|..++ .
T Consensus 170 ~~dp~~~~W~~~~-------~~P~~~~~~av~~~~g----~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--~ 236 (656)
T 1k3i_A 170 APQPGLGRWGPTI-------DLPIVPAAAAIEPTSG----RVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--V 236 (656)
T ss_dssp CCCTTSCEEEEEE-------ECSSCCSEEEEETTTT----EEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--E
T ss_pred cCCCCCCeeeeec-------cCCCCceeEEEEecCC----EEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--c
Confidence 3344455787653 2345677777773 33 699999986521 1223568999999999999886 5
Q ss_pred CCCCcccc--EEEE-ECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcc-cC
Q 036185 340 SPSPRLGH--TSSL-IGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGG-LN 414 (1057)
Q Consensus 340 ~P~~R~~h--s~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG-~~ 414 (1057)
+|.+|..| ++++ .+++||++||... .++++||+.+++|+.++ ++|.+|..|+++++ +++||++|| .+
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG~~~ 308 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWS 308 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECCCCC
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeCccc
Confidence 66666554 3444 5899999999865 27999999999999996 89999999999999 999999999 56
Q ss_pred CCcccceEEEEECCCCcEEEeecCC--CCCC-------------------------------------------------
Q 036185 415 NDTIFSSLHVLDTDTLQWKELLING--EGPC------------------------------------------------- 443 (1057)
Q Consensus 415 ~~~~~~~v~~yD~~t~~W~~~~~~g--~~P~------------------------------------------------- 443 (1057)
+...++++++||+.+++|+.++..+ +++.
T Consensus 309 ~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~ 388 (656)
T 1k3i_A 309 GGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR 388 (656)
T ss_dssp SSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEEC
T ss_pred CCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcc
Confidence 6667899999999999999973211 0111
Q ss_pred --------CcceeEEEE---ECCEEEEEecCC---CCcccC---cEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CC
Q 036185 444 --------ARHSHSMLA---YGSRLYMFGGYN---GEKALG---DLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KN 505 (1057)
Q Consensus 444 --------~r~~~s~~~---~~~~lyv~GG~~---~~~~~~---~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~ 505 (1057)
++..++++. .+++||++||.+ +...++ .+++||+.+++|+.+. .+.+|.+|..|+++.+ ++
T Consensus 389 ~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g 467 (656)
T 1k3i_A 389 QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDG 467 (656)
T ss_dssp EETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTS
T ss_pred ccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCC
Confidence 122344443 489999999964 334455 7899999999999874 2478999999999988 99
Q ss_pred EEEEEeccCC------CCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEe--CCEEEEEeCCC
Q 036185 506 YLGLFGGCPV------RQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVV--DDDLIMIGGGA 564 (1057)
Q Consensus 506 ~l~i~GG~~~------~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~--~~~iyi~GGg~ 564 (1057)
+|||+||.+. ....+++++||+.+++|+.+..++ .+|..|+++++ ++++|++||+.
T Consensus 468 ~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~---~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 468 STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS---IVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS---SCCCTTEEEEECTTSCEEEEECCC
T ss_pred CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC---CccccccHhhcCCCcEEEecCCCC
Confidence 9999999752 245789999999999999986543 45777777776 89999999963
No 26
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.90 E-value=4.7e-23 Score=237.43 Aligned_cols=222 Identities=17% Similarity=0.184 Sum_probs=175.6
Q ss_pred CceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccC--CCCccccceEEEeeCCc-eEEEEeCCEEE
Q 036185 793 SRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVA--PTGTRDSALEILVGDNG-WVKHCENGILY 869 (1057)
Q Consensus 793 ~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~--~~~~r~~~~~~l~G~~~-~~~~~e~gi~~ 869 (1057)
.-.|+|||++++|.. ...++.+.+.|++++.+.++++.|+.+.+.. ..+......++++|+.+ .+++.|||++|
T Consensus 109 l~vD~y~~~~vvq~~---~~~~~~~~~~i~~al~~~~~~~~i~~k~~~~~r~~~g~~~~~~~l~G~~~~~~~v~E~g~~f 185 (393)
T 4dmg_A 109 LVVDRFGEVLVLQVR---SRGMEALREVWLPALLEVVAPKGVYERSDVEARRQEGLPERVGVVYGEVPEVLEVEEDGLRF 185 (393)
T ss_dssp EEEEEETTEEEEEEC---SHHHHHTHHHHHHHHHHHHCCSEEEECCCHHHHHHTTCCCCCEEEEECCCSEEEEEETTEEE
T ss_pred EEEEEECCEEEEEEC---cHHHHHHHHHHHHHHHHHcCCCEEEEEcCcchHhhcCCCcccceEecCCCCcEEEEECCEEE
Confidence 368999999999987 4567788899999999999888888775421 11223446788999854 45689999999
Q ss_pred EEecce---eEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc
Q 036185 870 SFDATK---CMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD 946 (1057)
Q Consensus 870 ~~d~~~---~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~ 946 (1057)
.+|+.. +.|+..+...|..+.....+|++|||+|||+|.|++.+| ..|+. |+|+|+|+.|++.+++|+++|++..
T Consensus 186 ~vd~~~~~~tG~f~dqr~~r~~l~~~~~~g~~VLDlg~GtG~~sl~~a-~~ga~-V~avDis~~al~~a~~n~~~ng~~~ 263 (393)
T 4dmg_A 186 PIPLALAQKTGYYLDQRENRRLFEAMVRPGERVLDVYSYVGGFALRAA-RKGAY-ALAVDKDLEALGVLDQAALRLGLRV 263 (393)
T ss_dssp EEETTTCCTTSSCGGGHHHHHHHHTTCCTTCEEEEESCTTTHHHHHHH-HTTCE-EEEEESCHHHHHHHHHHHHHHTCCC
T ss_pred EEechhccccCcCCCHHHHHHHHHHHhcCCCeEEEcccchhHHHHHHH-HcCCe-EEEEECCHHHHHHHHHHHHHhCCCC
Confidence 999974 334455666676776666679999999999999999998 45776 9999999999999999999999974
Q ss_pred cEEEEeCCccccCC--CCCccEEEECCCCCCh--------------hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHH
Q 036185 947 HCIVLEGDNRFTAP--KGVANRVCLGLIPTSE--------------NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEH 1010 (1057)
Q Consensus 947 ~v~~~~~D~~~~~~--~~~~D~Vil~~~P~~~--------------~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~ 1010 (1057)
.+.++|++++++ ...||+|++|| |.+. ..+..++++|+ +||+|++++|++..+. +.
T Consensus 264 --~~~~~D~~~~l~~~~~~fD~Ii~dp-P~f~~~~~~~~~~~~~~~~ll~~a~~~Lk-pGG~Lv~~s~s~~~~~----~~ 335 (393)
T 4dmg_A 264 --DIRHGEALPTLRGLEGPFHHVLLDP-PTLVKRPEELPAMKRHLVDLVREALRLLA-EEGFLWLSSCSYHLRL----ED 335 (393)
T ss_dssp --EEEESCHHHHHHTCCCCEEEEEECC-CCCCSSGGGHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCH----HH
T ss_pred --cEEEccHHHHHHHhcCCCCEEEECC-CcCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCCCCH----HH
Confidence 456999998763 23499999999 7642 44677777887 7999999999987655 34
Q ss_pred HHHHHHHHHHhcCCcee
Q 036185 1011 VSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 1011 ~~~~i~~~~~~~g~~~~ 1027 (1057)
+.+.+.+++.+.|+.++
T Consensus 336 f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 336 LLEVARRAAADLGRRLR 352 (393)
T ss_dssp HHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhCCeEE
Confidence 56778888888887653
No 27
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.90 E-value=5.5e-23 Score=254.91 Aligned_cols=264 Identities=12% Similarity=0.073 Sum_probs=197.9
Q ss_pred EEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCC-----CCCCcEEEEECCCCcEEEeeccCCCCCc
Q 036185 322 LFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPL-----NILSDVWVFNMAKSKWTLLECSGSVFQP 394 (1057)
Q Consensus 322 ~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~-----~~~~~v~~yd~~t~~W~~~~~~g~~p~~ 394 (1057)
+..||+.+++|..+. |.|+..|+++++ +++||++||..... ...+++++||+.+++|+.++ .+|.+
T Consensus 168 ~~~~dp~~~~W~~~~----~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~---~~~~~ 240 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTI----DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT---VTVTK 240 (656)
T ss_dssp CCCCCTTSCEEEEEE----ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE---EEECS
T ss_pred cccCCCCCCeeeeec----cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc---ccCCC
Confidence 567899999999886 345566677766 89999999986421 13458999999999999887 56666
Q ss_pred ccceE--EEE-ECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEec-CCCCccc
Q 036185 395 RHRHA--AAV-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGG-YNGEKAL 469 (1057)
Q Consensus 395 R~~hs--a~~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG-~~~~~~~ 469 (1057)
|..|+ +++ .+++||++||.+.. ++++||+.+++|+.++. +|.+|..|+++.+ +++||++|| .++...+
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~~---~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGPD---MQVARGYQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECCC---CSSCCSSCEEEECTTSCEEEECCCCCSSSCC
T ss_pred CCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECCC---CCccccccceEEecCCeEEEEeCcccCCccc
Confidence 66553 443 48999999998754 79999999999999865 6889999999999 999999999 5666788
Q ss_pred CcEEEEECCCCeEEEeeccC--CCCC------------------------------------------------------
Q 036185 470 GDLYTFDVHACLWKKEDIAA--RSPH------------------------------------------------------ 493 (1057)
Q Consensus 470 ~~l~~yd~~t~~W~~v~~~~--~~P~------------------------------------------------------ 493 (1057)
+++++||+.+++|+.+...+ +++.
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 99999999999999863211 1111
Q ss_pred ---CceeeEEEE---ECCEEEEEeccCC---CCCCC---eEEEEECCCCeEEEeeccCCCCCcccceEEEEe-CCEEEEE
Q 036185 494 ---ARFSHTMFL---YKNYLGLFGGCPV---RQNYQ---ELSLLDLQLHIWKHLKLNYVCKELFVRSTANVV-DDDLIMI 560 (1057)
Q Consensus 494 ---~R~~hs~~~---~~~~l~i~GG~~~---~~~~~---~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~-~~~iyi~ 560 (1057)
++..++++. .+++||++||.+. ....+ .+++||+.+++|..+.. ...+.+|..++++++ +++|||+
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~mp~~R~~~~~~~l~~g~i~v~ 472 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS-NGLYFARTFHTSVVLPDGSTFIT 472 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT-TCCSSCCBSCEEEECTTSCEEEE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc-CCCCCCcccCCeEECCCCCEEEE
Confidence 122345554 3899999999643 22344 79999999999999861 122345777887777 9999999
Q ss_pred eCCCcc--ccCCceecccEEeeccccccccCCCCCCCCCCCc
Q 036185 561 GGGAAC--YAFGTKFSEPVKINLSSVPLMSLDDCNIPPEMGE 600 (1057)
Q Consensus 561 GGg~~~--~~~g~~~~~~~~~dl~~~~~~~~~~~~~~~~~~~ 600 (1057)
||.... +......++++.+|..+..|........+...+.
T Consensus 473 GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs 514 (656)
T 1k3i_A 473 GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHS 514 (656)
T ss_dssp CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTE
T ss_pred CCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcccccc
Confidence 996432 2222456788899999888988776655555443
No 28
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.88 E-value=2.3e-21 Score=223.87 Aligned_cols=242 Identities=13% Similarity=0.060 Sum_probs=176.9
Q ss_pred HHHHHH---HHHHhcCCCc-------hH-HhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcC-ccEEEc
Q 036185 769 AMTEAV---ASLIEQKGLS-------AR-LLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILN-TSHLAR 836 (1057)
Q Consensus 769 ~~~~~l---~~~l~~~~~~-------~~-~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~i~~ 836 (1057)
++.+.+ ++++.+.+++ ++ .++.+ ..|+||+++++++++ ..++...+.|.+++.+.++ ++.|+.
T Consensus 77 ~~~~a~~~r~~~~~~~~~~~yr~~~~egd~l~gl--~vd~~g~~~vv~~~~---~~~~~~~~~i~~~l~~~~~~~~~i~~ 151 (385)
T 2b78_A 77 LFQWSKDKRKNFAHSKLTTAYRLFNQDGDSFGGV--TIDCYGDFVLFSWYN---SFVYQIRDEIVAAFRQVYPNFLGAYE 151 (385)
T ss_dssp HHHHHHHTTHHHHHCSSCCEEEEEEGGGGTCTTE--EEEEETTEEEEEECS---HHHHHTHHHHHHHHHHHSTTCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCceEEEEeCCCCCCCce--EEEEECCEEEEEECc---HHHHHhHHHHHHHHHHHhCCCCEEEE
Confidence 444444 7777654442 32 45554 578999999999873 3444566778888888765 566665
Q ss_pred ccccCCCCccccceEEEeeCC-ce-EEEEeCCEEEEEecc---eeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHH
Q 036185 837 QGRVAPTGTRDSALEILVGDN-GW-VKHCENGILYSFDAT---KCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVL 911 (1057)
Q Consensus 837 ~~~i~~~~~r~~~~~~l~G~~-~~-~~~~e~gi~~~~d~~---~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl 911 (1057)
+..-..+ ....++++|+. +. .++.|+|++|.+++. ++.|+......+..+...+.+|++|||+|||+|.|++
T Consensus 152 ~~~~~~~---~~~~~~l~G~~~~~~~~v~e~g~~f~v~~~~~~~t~ff~~~~~~~~~~~~~~~~~~~VLDl~cGtG~~sl 228 (385)
T 2b78_A 152 KIRFKGI---DNVSAHLYGQEAPEQFLILENGISYNVFLNDGLMTGIFLDQRQVRNELINGSAAGKTVLNLFSYTAAFSV 228 (385)
T ss_dssp EECC-------CCEEEEEESCCCSSEEEEETTEEEEECSSSSSCCSSCGGGHHHHHHHHHTTTBTCEEEEETCTTTHHHH
T ss_pred echhhcC---CccceeecCCCCCceEEEEECCEEEEEeccccccCCcCCcHHHHHHHHHHHhcCCCeEEEEeeccCHHHH
Confidence 4221112 55688899984 32 345789999999998 3344455555555555544788999999999999999
Q ss_pred HHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc-cEEEEeCCccccCC-----CCCccEEEECCCCCCh---------
Q 036185 912 PFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD-HCIVLEGDNRFTAP-----KGVANRVCLGLIPTSE--------- 976 (1057)
Q Consensus 912 ~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~-~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~~--------- 976 (1057)
.+| ..++++|+++|+++.|++.+++|++.|++++ +++++++|++++++ ...||+|++|| |.+.
T Consensus 229 ~la-~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DP-P~~~~~~~~~~~~ 306 (385)
T 2b78_A 229 AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDP-PSFARNKKEVFSV 306 (385)
T ss_dssp HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC-CCC-----CCCCH
T ss_pred HHH-HCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECC-CCCCCChhhHHHH
Confidence 998 4578899999999999999999999999976 79999999998764 34799999999 7742
Q ss_pred -----hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 977 -----NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 977 -----~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
..+..+.++|+ +||+|++.++.+.... +.+.+.+.+++.+.|+.
T Consensus 307 ~~~~~~ll~~~~~~L~-pgG~l~~~~~~~~~~~----~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 307 SKDYHKLIRQGLEILS-ENGLIIASTNAANMTV----SQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp HHHHHHHHHHHHHTEE-EEEEEEEEECCTTSCH----HHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHhcC-CCcEEEEEeCCCcCCH----HHHHHHHHHHHHHcCCc
Confidence 12345567777 7999999999887643 45577788888888764
No 29
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.88 E-value=1.8e-21 Score=226.17 Aligned_cols=228 Identities=17% Similarity=0.178 Sum_probs=172.7
Q ss_pred HhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCC--CccccceEEEeeCCc--eEEE
Q 036185 787 LLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPT--GTRDSALEILVGDNG--WVKH 862 (1057)
Q Consensus 787 ~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~--~~r~~~~~~l~G~~~--~~~~ 862 (1057)
.++.+ -.|+||+++++++++ ..++...+.+.+++.+.++++.|+.+++.... +......++++|+.+ ..++
T Consensus 111 ~l~gl--~vd~~g~~~v~~~~~---~~~~~~~~~i~~~l~~~~~~~~i~~~~~~~~~~~~g~~~~~~~l~G~~~~~~~~~ 185 (396)
T 3c0k_A 111 GLPGI--TIDRFGNFLVLQLLS---AGAEYQRAALISALQTLYPECSIYDRSDVAVRKKEGMELTQGPVTGELPPALLPI 185 (396)
T ss_dssp TCTTE--EEEEETTEEEEEECS---HHHHHTHHHHHHHHHHHCTTSEEEEEECCTHHHHTTCCCEEEEEESCCCCSSEEE
T ss_pred CCCce--EEEEECCEEEEEECC---HHHHHHHHHHHHHHHHhcCCCEEEEeCCchhHhhcCCCccceeEcCCCCCceEEE
Confidence 45554 578999999999883 34445567777778777777777766432100 122346788999864 5667
Q ss_pred EeCCEEEEEecc---eeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHH
Q 036185 863 CENGILYSFDAT---KCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNL 939 (1057)
Q Consensus 863 ~e~gi~~~~d~~---~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~ 939 (1057)
.|+|++|.+++. ++.|++.+...+..+... .++++|||+|||+|+|++.+| ..++++|+|+|+++.|++.+++|+
T Consensus 186 ~~~g~~f~v~~~~~~~tgff~~~~~~~~~l~~~-~~~~~VLDl~cG~G~~sl~la-~~g~~~V~~vD~s~~al~~a~~n~ 263 (396)
T 3c0k_A 186 EEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY-VENKRVLNCFSYTGGFAVSAL-MGGCSQVVSVDTSQEALDIARQNV 263 (396)
T ss_dssp EETTEEEEECTTTSSTTSSCGGGHHHHHHHHHH-CTTCEEEEESCTTCSHHHHHH-HTTCSEEEEEESCHHHHHHHHHHH
T ss_pred EECCEEEEEeccccccCCcCcCHHHHHHHHHHh-hCCCeEEEeeccCCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHH
Confidence 899999999997 223444555445444444 688999999999999999998 456789999999999999999999
Q ss_pred HHcCC-CccEEEEeCCccccCC-----CCCccEEEECCCCCCh--------------hHHHHHHHHhhCCCcEEEEEccc
Q 036185 940 QANSV-SDHCIVLEGDNRFTAP-----KGVANRVCLGLIPTSE--------------NSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 940 ~~N~~-~~~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~~--------------~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+.|++ +++++++++|+.++++ ...||+|++|| |... ..+..+++.|+ +||+|+++++.
T Consensus 264 ~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dp-P~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 341 (396)
T 3c0k_A 264 ELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDP-PKFVENKSQLMGACRGYKDINMLAIQLLN-EGGILLTFSCS 341 (396)
T ss_dssp HHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC-SSTTTCSSSSSCCCTHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred HHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECC-CCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 99999 7689999999998764 35799999999 7632 34667788887 79999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCCcee
Q 036185 1000 KDSEEKLWAEHVSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 1000 ~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 1027 (1057)
..... +.+.+.+.+++.+.|+.++
T Consensus 342 ~~~~~----~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 342 GLMTS----DLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp TTCCH----HHHHHHHHHHHHHHTCCEE
T ss_pred CcCCH----HHHHHHHHHHHHHcCCeEE
Confidence 86643 3446777778888887654
No 30
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.85 E-value=2.6e-20 Score=216.43 Aligned_cols=228 Identities=18% Similarity=0.191 Sum_probs=168.9
Q ss_pred HhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhH-cCccEEEcccccC--CCCccccceEEEeeCCce-EEE
Q 036185 787 LLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKI-LNTSHLARQGRVA--PTGTRDSALEILVGDNGW-VKH 862 (1057)
Q Consensus 787 ~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~i~~~~~i~--~~~~r~~~~~~l~G~~~~-~~~ 862 (1057)
.++.+ -.|+||+++++++++ ..++...+.+.+++.+. .+++.|+.+++.. ..+......++++|+.+. ..+
T Consensus 108 ~l~gl--~vd~~g~~~v~~~~~---~~~~~~~~~i~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 182 (396)
T 2as0_A 108 YLPGL--IVDRFNDIASLQISS---AGMERFKLDVAEAIMEVEPGIETVFEKNTGRSRRREGLPEIERVLLGKEKYRTII 182 (396)
T ss_dssp TCTTE--EEEEETTEEEEEECC---HHHHTTHHHHHHHHHHHCTTCCEEEEEECSHHHHHTTCCCEEEEEEESCCCEEEE
T ss_pred CCCcE--EEEEECCEEEEEECc---HHHHHHHHHHHHHHHHhCCCCCEEEEeCCcchHhhcCCCcccceecCCCCceEEE
Confidence 45554 578999999999883 34444566777777777 5667776553211 001223467889998754 457
Q ss_pred EeCCEEEEEecc--eeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH
Q 036185 863 CENGILYSFDAT--KCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ 940 (1057)
Q Consensus 863 ~e~gi~~~~d~~--~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~ 940 (1057)
.|+|++|.+++. ++.|++.+...+..+.....++++|||+|||+|.|++.+| ..|+++|+++|+++.|++.+++|++
T Consensus 183 ~e~g~~~~~~~~~~~tg~f~~~~~~~~~~~~~~~~~~~VLDl~~G~G~~~~~la-~~g~~~v~~vD~s~~~l~~a~~n~~ 261 (396)
T 2as0_A 183 QEGRAKFIVDMRGQKTGFFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAA-IAGADEVIGIDKSPRAIETAKENAK 261 (396)
T ss_dssp EETTEEEEEESSSSSSCCCSTTHHHHHHHGGGCCTTCEEEETTCTTTHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred EeCCEEEEEeccccccCccCCHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHH-HCCCCEEEEEeCCHHHHHHHHHHHH
Confidence 899999999993 1234455655555565555589999999999999999998 4578899999999999999999999
Q ss_pred HcCCCccEEEEeCCccccCC-----CCCccEEEECCCCCCh--------------hHHHHHHHHhhCCCcEEEEEccccc
Q 036185 941 ANSVSDHCIVLEGDNRFTAP-----KGVANRVCLGLIPTSE--------------NSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 941 ~N~~~~~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~~--------------~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
.|+++++++++++|+.++++ ...||+|++|| |.+. ..+..++++|+ +||+|++.+|.+.
T Consensus 262 ~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp-P~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~ 339 (396)
T 2as0_A 262 LNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP-PAFVQHEKDLKAGLRAYFNVNFAGLNLVK-DGGILVTCSCSQH 339 (396)
T ss_dssp HTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC-CCSCSSGGGHHHHHHHHHHHHHHHHTTEE-EEEEEEEEECCTT
T ss_pred HcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEECCCC
Confidence 99997789999999988764 45799999999 7642 33566777777 7999999999876
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCce
Q 036185 1002 SEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
.+. +.+.+.+.+++...|+.+
T Consensus 340 ~~~----~~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 340 VDL----QMFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp SCH----HHHHHHHHHHHHHTTEEE
T ss_pred CCH----HHHHHHHHHHHHHcCCeE
Confidence 654 334566777777777653
No 31
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.83 E-value=5.6e-20 Score=212.46 Aligned_cols=236 Identities=19% Similarity=0.186 Sum_probs=172.4
Q ss_pred HhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCC--CCccccceEEEeeCCce-EEEE
Q 036185 787 LLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAP--TGTRDSALEILVGDNGW-VKHC 863 (1057)
Q Consensus 787 ~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~--~~~r~~~~~~l~G~~~~-~~~~ 863 (1057)
.++.+ ..|+||+++++++++ ..++...+.+.+++.+.+ +.|+.+++... .+.......+++|+.+. .++.
T Consensus 104 ~l~~l--~vd~~g~~~vv~~~~---~~~~~~~~~i~~~l~~~~--~~i~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~ 176 (382)
T 1wxx_A 104 LLPGL--VVDYYAGHAVVQATA---HAWEGLLPQVAEALRPHV--QSVLAKNDARTRELEGLPLYVRPLLGEVPERVQVQ 176 (382)
T ss_dssp TCTTE--EEEEETTEEEEEECS---HHHHTTHHHHHHHHGGGC--SEEEEEECCTHHHHTTCCCEEEEEESCCCSEEEEE
T ss_pred CCCcE--EEEEECCEEEEEECc---HHHHHHHHHHHHHHHHHh--hEEEEcCCchhhhhcCCCcccceecCCCCceEEEE
Confidence 56665 577999999999883 444555666777777765 45554433110 01123456789998643 4578
Q ss_pred eCCEEEEEecce---eEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH
Q 036185 864 ENGILYSFDATK---CMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ 940 (1057)
Q Consensus 864 e~gi~~~~d~~~---~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~ 940 (1057)
|+|++|.+++.. +.|+..+...+..+... ++++|||+|||+|.|++.+|.. +.+|+++|+++.|++.+++|++
T Consensus 177 e~g~~f~i~~~~~~~~g~f~~~~~~~~~~~~~--~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~ 252 (382)
T 1wxx_A 177 EGRVRYLVDLRAGQKTGAYLDQRENRLYMERF--RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENAR 252 (382)
T ss_dssp ETTEEEEEECSTTSCCCCCGGGHHHHHHGGGC--CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHH
T ss_pred ECCEEEEEEchhcccCccccchHHHHHHHHhc--CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHH
Confidence 999999999973 33444554445455444 8899999999999999999843 7789999999999999999999
Q ss_pred HcCCCccEEEEeCCccccCC-----CCCccEEEECCCCCCh--------------hHHHHHHHHhhCCCcEEEEEccccc
Q 036185 941 ANSVSDHCIVLEGDNRFTAP-----KGVANRVCLGLIPTSE--------------NSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 941 ~N~~~~~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~~--------------~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
.|++++ ++++++|+.++++ ...||+|++|| |.+. ..+..+.++|+ +||+|++++|+..
T Consensus 253 ~n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp-P~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~ 329 (382)
T 1wxx_A 253 LNGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLDP-PAFAKGKKDVERAYRAYKEVNLRAIKLLK-EGGILATASCSHH 329 (382)
T ss_dssp HTTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEECC-CCSCCSTTSHHHHHHHHHHHHHHHHHTEE-EEEEEEEEECCTT
T ss_pred HcCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEECC-CCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCC
Confidence 999984 9999999998764 45799999999 7632 34666777787 7999999999876
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEEE
Q 036185 1002 SEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLV 1047 (1057)
Q Consensus 1002 ~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~~ 1047 (1057)
.+. +.+.+.+.+++.+.|..+ +.+....++.+|.+
T Consensus 330 ~~~----~~~~~~i~~~~~~~g~~~-------~~i~~~~~~~d~p~ 364 (382)
T 1wxx_A 330 MTE----PLFYAMVAEAAQDAHRLL-------RVVEKRGQPFDHPV 364 (382)
T ss_dssp SCH----HHHHHHHHHHHHHTTCCE-------EEEEEECCCTTSCC
T ss_pred CCH----HHHHHHHHHHHHHcCCeE-------EEEEcCCCCCCCCC
Confidence 654 334667777888888764 33455566666543
No 32
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.82 E-value=3.3e-19 Score=201.34 Aligned_cols=214 Identities=11% Similarity=-0.079 Sum_probs=156.0
Q ss_pred ceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCCCccccceEEEeeCC---ceEEEEeCCEEEE
Q 036185 794 RWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGTRDSALEILVGDN---GWVKHCENGILYS 870 (1057)
Q Consensus 794 ~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~r~~~~~~l~G~~---~~~~~~e~gi~~~ 870 (1057)
..|+|||++++|..+......+. .+.+ ..+++.|+.+++..++ ..++++|+. ..+.+.|+|++|.
T Consensus 55 ~~d~~g~~~vvq~~~~~~~~~~~-~~~~------~~~~~~i~~r~~~~eg-----~~~~~~g~~~~~~~~~i~e~g~~f~ 122 (332)
T 2igt_A 55 KLEQYGDYRVVRPEAQALWRPLV-PDRV------WQNADAIFTGDTDEDG-----MGRWRFPKEALGETWPLSLLGVEFL 122 (332)
T ss_dssp EEEEETTEEEEEECTTCCSCCCS-CHHH------HHTCSEEEEECC---C-----CEEEECSSSCCCSEEEEEETTEEEE
T ss_pred EEEEECCEEEEEECcHHHhhhhh-hhhh------hcCCcEEEEeCcccCC-----CcceEecCCCCCCceEEEECCEEEE
Confidence 68999999999988644322211 1111 1456777766532112 337888853 3556889999999
Q ss_pred Eeccee---EeeCCCHHHHHHHhhcc---CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCC
Q 036185 871 FDATKC---MFSWGNLSEKLRMARLD---CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSV 944 (1057)
Q Consensus 871 ~d~~~~---~f~~~~~~er~r~~~~~---~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~ 944 (1057)
+++..+ .|++.+...+.++...+ .++++|||+|||+|.|++.+| +.++ +|++||+|+.|++.+++|++.|++
T Consensus 123 v~~~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la-~~ga-~V~~VD~s~~al~~a~~n~~~~gl 200 (332)
T 2igt_A 123 GRFTAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAA-AAGA-EVTHVDASKKAIGWAKENQVLAGL 200 (332)
T ss_dssp EECCSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHH-HTTC-EEEEECSCHHHHHHHHHHHHHHTC
T ss_pred EecCccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHH-HcCC-EEEEEECCHHHHHHHHHHHHHcCC
Confidence 999753 45677777777777665 367899999999999999998 4567 899999999999999999999999
Q ss_pred Cc-cEEEEeCCccccCC-----CCCccEEEECCCCCC---------------hhHHHHHHHHhhCCCcE-EEEEcccccc
Q 036185 945 SD-HCIVLEGDNRFTAP-----KGVANRVCLGLIPTS---------------ENSWVTAVQALRSEGGT-LHVHGNVKDS 1002 (1057)
Q Consensus 945 ~~-~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~---------------~~~~~~a~~~l~~~gg~-l~~~~~~~~~ 1002 (1057)
++ +++++++|++++++ ...||+|++|| |.+ ...+..+.++|+ +||+ +..+.+....
T Consensus 201 ~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dP-P~~~~~~~~~~~~~~~~~~~ll~~~~~~Lk-pgG~lli~~~~~~~~ 278 (332)
T 2igt_A 201 EQAPIRWICEDAMKFIQREERRGSTYDIILTDP-PKFGRGTHGEVWQLFDHLPLMLDICREILS-PKALGLVLTAYSIRA 278 (332)
T ss_dssp TTSCEEEECSCHHHHHHHHHHHTCCBSEEEECC-CSEEECTTCCEEEHHHHHHHHHHHHHHTBC-TTCCEEEEEECCTTS
T ss_pred CccceEEEECcHHHHHHHHHhcCCCceEEEECC-ccccCCchHHHHHHHHHHHHHHHHHHHhcC-cCcEEEEEECCCCCC
Confidence 75 59999999998764 45799999999 742 244666777777 6887 4445555543
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCcee
Q 036185 1003 EEKLWAEHVSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 1003 ~~~~~~~~~~~~i~~~~~~~g~~~~ 1027 (1057)
+. +.+.+.+.+++++.|+.++
T Consensus 279 ~~----~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 279 SF----YSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CH----HHHHHHHHHHTTTSCSEEE
T ss_pred CH----HHHHHHHHHHHHHcCCeEE
Confidence 33 3456777778888887654
No 33
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.81 E-value=3.6e-19 Score=219.71 Aligned_cols=226 Identities=15% Similarity=0.122 Sum_probs=161.1
Q ss_pred HHHHHHHHHHhcCCCc-----hHHhhcCCCceEEeCCEEEEccCCCC----CchhhhHHhhHHHHHHhHcC--ccEEEcc
Q 036185 769 AMTEAVASLIEQKGLS-----ARLLEQLPSRWERLGDIVVLPVTSFK----DPVWDSIGGELWPAVAKILN--TSHLARQ 837 (1057)
Q Consensus 769 ~~~~~l~~~l~~~~~~-----~~~l~~lp~~~d~~gdi~vl~~~~~~----~~~~~~~~~~l~~~l~~~~~--~~~i~~~ 837 (1057)
+.++..++++...+++ .+.++++..-.|+|||++++|..+.. ...++....++++++.+.++ ++.|+.+
T Consensus 402 ~a~~~r~~~~~~~~~~~~Rl~~~elp~~gl~vD~y~d~lvvq~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~k 481 (703)
T 3v97_A 402 KNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAPPKTIDAHKARQRLFDIIAATISVLGIAPNKLVLK 481 (703)
T ss_dssp HHHHHHHHHHHHHTBCEEEEEESCSTTSCEEEEEETTEEEEEECC-------CHHHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHHhccCCCcEEEEEcccCCcccEEEEEECCEEEEEeCCCccccchHHHHHHHHHHHHHHHHHhCCCcceeEEe
Confidence 3334444666543331 12244444789999999999987532 22456677788888888876 3556655
Q ss_pred cccCCCCccccceEEEeeCC-ceEEEEeCCEEEEEecc---eeEeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHH
Q 036185 838 GRVAPTGTRDSALEILVGDN-GWVKHCENGILYSFDAT---KCMFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPF 913 (1057)
Q Consensus 838 ~~i~~~~~r~~~~~~l~G~~-~~~~~~e~gi~~~~d~~---~~~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~ 913 (1057)
.+.. .+... .... .|+. ..+++.|||++|.+|+. +++|+..+...|..+.. ..+|++|||+|||+|.|++.+
T Consensus 482 ~r~~-~~g~~-~~~~-~g~~~~~~~v~E~g~~~~v~~~~~~~tG~f~d~r~~r~~l~~-~~~g~~VLDlg~GtG~~sl~a 557 (703)
T 3v97_A 482 TRER-QKGKN-QYQK-LGEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQ-MSKGKDFLNLFSYTGSATVHA 557 (703)
T ss_dssp CCC---------------CCSCCEEEEETTEEEEECSSSSSSCSCCGGGHHHHHHHHH-HCTTCEEEEESCTTCHHHHHH
T ss_pred cccc-ccCcc-hhhc-cCCCCceEEEEECCEEEEEeccccccCCCcccHHHHHHHHHH-hcCCCcEEEeeechhHHHHHH
Confidence 4421 11111 1222 3543 34668999999999997 56666666666666555 457899999999999999999
Q ss_pred HHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC-ccEEEEeCCccccCC--CCCccEEEECCCCCCh--------------
Q 036185 914 LVRAKARLVYACEWNPCAVEALKHNLQANSVS-DHCIVLEGDNRFTAP--KGVANRVCLGLIPTSE-------------- 976 (1057)
Q Consensus 914 a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~-~~v~~~~~D~~~~~~--~~~~D~Vil~~~P~~~-------------- 976 (1057)
| ..|+.+|++||+|+.|++.+++|+++|+++ ++++++++|++++++ ...||+|++|| |++.
T Consensus 558 a-~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP-P~f~~~~~~~~~~~~~~~ 635 (703)
T 3v97_A 558 G-LGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP-PTFSNSKRMEDAFDVQRD 635 (703)
T ss_dssp H-HTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC-CSBC-------CCBHHHH
T ss_pred H-HCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC-ccccCCccchhHHHHHHH
Confidence 8 578889999999999999999999999997 589999999999764 46799999999 7642
Q ss_pred --hHHHHHHHHhhCCCcEEEEEccccc
Q 036185 977 --NSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 977 --~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
..+..+.++|+ +||+|++.++...
T Consensus 636 ~~~ll~~a~~~Lk-pgG~L~~s~~~~~ 661 (703)
T 3v97_A 636 HLALMKDLKRLLR-AGGTIMFSNNKRG 661 (703)
T ss_dssp HHHHHHHHHHHEE-EEEEEEEEECCTT
T ss_pred HHHHHHHHHHhcC-CCcEEEEEECCcc
Confidence 22667778887 7999998888743
No 34
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.69 E-value=4.6e-17 Score=186.34 Aligned_cols=137 Identities=14% Similarity=0.093 Sum_probs=114.0
Q ss_pred EEEEeCCEEEEEecc--------eeEeeCCCHHHHHHHhh---cc----CCCCEEEEecCcccHhHHHHHHh-CCCcEEE
Q 036185 860 VKHCENGILYSFDAT--------KCMFSWGNLSEKLRMAR---LD----CKDEVIVDLFAGIGYFVLPFLVR-AKARLVY 923 (1057)
Q Consensus 860 ~~~~e~gi~~~~d~~--------~~~f~~~~~~er~r~~~---~~----~~g~~VlDlf~G~G~fsl~~a~~-~~a~~V~ 923 (1057)
.+++|||++|.+|.. .+||++++..+|.+... .. .+|++|||+|||+|+|+|++|++ .||++|+
T Consensus 2 ~~i~E~g~~~~v~~~~~~~~~~~~~Ffn~~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~ 81 (392)
T 3axs_A 2 EIVQEGIAKIIVPEIPKTVSSDMPVFYNPRMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAY 81 (392)
T ss_dssp EEEEETTEEEEECCCCSSCCTTCCSSCCGGGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEE
T ss_pred eEEEECCEEEEEecccccccCCCCEEEcCCcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEE
Confidence 357899999999763 57788888888876532 22 35899999999999999999954 3678999
Q ss_pred EEecCHHHHHHHHHHHHHcCCCcc-EEEEeCCccccCC---CCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEc
Q 036185 924 ACEWNPCAVEALKHNLQANSVSDH-CIVLEGDNRFTAP---KGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 924 avD~n~~ai~~~~~N~~~N~~~~~-v~~~~~D~~~~~~---~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
++|+||.|++.+++|+++|+++++ ++++++|+++++. ...||+|++||+-....++..|+++|+ +||+|++.+
T Consensus 82 avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~g~~~~~l~~a~~~Lk-~gGll~~t~ 158 (392)
T 3axs_A 82 ANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDPFGTPVPFIESVALSMK-RGGILSLTA 158 (392)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECCSSCCHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECCCcCHHHHHHHHHHHhC-CCCEEEEEe
Confidence 999999999999999999999866 9999999988764 347999999993334678888998888 699888866
No 35
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.68 E-value=4.5e-16 Score=178.80 Aligned_cols=177 Identities=14% Similarity=0.160 Sum_probs=123.3
Q ss_pred ceEEEeeCCceEEEE-eCCEEEEEecceeEeeCCCHHHHHHHhhc----c-CCCCEEEEecCcccHhHHHHHHhCCCcEE
Q 036185 849 ALEILVGDNGWVKHC-ENGILYSFDATKCMFSWGNLSEKLRMARL----D-CKDEVIVDLFAGIGYFVLPFLVRAKARLV 922 (1057)
Q Consensus 849 ~~~~l~G~~~~~~~~-e~gi~~~~d~~~~~f~~~~~~er~r~~~~----~-~~g~~VlDlf~G~G~fsl~~a~~~~a~~V 922 (1057)
..++++|+....+.. .+|+.|.+++....|++.|......+... . ..+++|||+|||+|.|++++| .++.+|
T Consensus 161 ~~~~~~G~~~i~e~~~~~g~~~~~~~~~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la--~~~~~V 238 (369)
T 3bt7_A 161 KTKIELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALA--RNFDRV 238 (369)
T ss_dssp TEEEESSCSEEEEECCBTTBCCEEEEETTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHG--GGSSEE
T ss_pred ceEEEcCCCEEEEEeccCCceEEEEECCCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHH--hcCCEE
Confidence 456788887554433 27955555444445667777655444432 2 236899999999999999988 467789
Q ss_pred EEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---C--------------CCccEEEECCCCCChhHHHHHHHH
Q 036185 923 YACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---K--------------GVANRVCLGLIPTSENSWVTAVQA 985 (1057)
Q Consensus 923 ~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~--------------~~~D~Vil~~~P~~~~~~~~a~~~ 985 (1057)
+|+|+|+.|++.+++|++.|+++ +++++++|+.++++ . ..||+|++|| |.. .....+++.
T Consensus 239 ~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dP-Pr~-g~~~~~~~~ 315 (369)
T 3bt7_A 239 LATEIAKPSVAAAQYNIAANHID-NVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDP-PRS-GLDSETEKM 315 (369)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCC-SEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECC-CTT-CCCHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECc-Ccc-ccHHHHHHH
Confidence 99999999999999999999996 79999999988753 1 2699999999 764 345567778
Q ss_pred hhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEE
Q 036185 986 LRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHL 1046 (1057)
Q Consensus 986 l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~ 1046 (1057)
|+ ++|.|++.+|.+.. . .+.+..++. |+ .+..++.|. .-|+..|+
T Consensus 316 l~-~~g~ivyvsc~p~t----~----ard~~~l~~--~y----~~~~~~~~D-~FP~T~Hv 360 (369)
T 3bt7_A 316 VQ-AYPRILYISCNPET----L----CKNLETLSQ--TH----KVERLALFD-QFPYTHHM 360 (369)
T ss_dssp HT-TSSEEEEEESCHHH----H----HHHHHHHHH--HE----EEEEEEEEC-CSTTSSCC
T ss_pred Hh-CCCEEEEEECCHHH----H----HHHHHHHhh--Cc----EEEEEEeec-cCCCCCcE
Confidence 87 57777777776532 1 222233332 33 233455554 35888886
No 36
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.59 E-value=1.5e-14 Score=168.45 Aligned_cols=213 Identities=16% Similarity=0.174 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHHhcCCC-------chHHhhcCCCceEE-eCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcc-
Q 036185 767 FKAMTEAVASLIEQKGL-------SARLLEQLPSRWER-LGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQ- 837 (1057)
Q Consensus 767 ~~~~~~~l~~~l~~~~~-------~~~~l~~lp~~~d~-~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~- 837 (1057)
++.+...+++++++.++ ..++++++-.+-.. .|++++..++... .. +.+ + +..++..++.+
T Consensus 164 ~~~~~~~l~~~~~~~~~~~y~~~~~~g~lr~~~vr~~~~~g~~~v~l~~~~~--~~----~~l-~---~~~~~~~i~~~~ 233 (425)
T 2jjq_A 164 SREAIERLKEFIEEEKISVWNIKKDEGFLRYMVLREGKFTEEVMVNFVTKEG--NL----PDP-T---NYFDFDSIYWSV 233 (425)
T ss_dssp HHHHHHHHHHHHHHHTCCBBBTTTTBCSEEEEEEEECTTTCCEEEEEEESSS--CC----CCC-T---TTCCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCccccccCCCcceEEEEEEccCCCCEEEEEEeCch--hH----HHH-h---hcCCeeEEEEEc
Confidence 45566677777765544 23455555444442 4666665433111 11 111 1 22233444432
Q ss_pred cccCCCCccccceEEEeeCCceEEEEeCCEEEEEecceeEeeCCCHHHHHHHhhc---cCCCCEEEEecCcccHhHHHHH
Q 036185 838 GRVAPTGTRDSALEILVGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMARL---DCKDEVIVDLFAGIGYFVLPFL 914 (1057)
Q Consensus 838 ~~i~~~~~r~~~~~~l~G~~~~~~~~e~gi~~~~d~~~~~f~~~~~~er~r~~~~---~~~g~~VlDlf~G~G~fsl~~a 914 (1057)
++...+.... ..++++|+....+ ..+|++|.+++..+ .+.|.....+++.. ..++++|||+|||+|.|++++|
T Consensus 234 ~~~~~~~~~g-~~~~l~G~~~i~e-~~~g~~f~~~~~~F--~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 234 NRSKSDVSYG-DIERFWGKEFIRE-RLDDVDYLIHPNSF--FQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLA 309 (425)
T ss_dssp CCSSSCCSCC-EEEEEEECSCEEE-EETTEEEEECTTSC--CCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHH
T ss_pred CCCCCceecc-eEEEEECCCeEEE-EECCEEEEEccccc--cccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHH
Confidence 2211122334 7788999875433 35899999999863 44444443333322 5678999999999999999998
Q ss_pred HhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCCC--hhHHHHHHHHhhCCCcE
Q 036185 915 VRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTS--ENSWVTAVQALRSEGGT 992 (1057)
Q Consensus 915 ~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~--~~~~~~a~~~l~~~gg~ 992 (1057)
+ .+.+|+|+|+++.|++.+++|++.|+++ ++++++|+.++++. .||.|++|| |.. ...+..+++.++ ++|+
T Consensus 310 ~--~~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~d~~~~~~~-~fD~Vv~dP-Pr~g~~~~~~~~l~~l~-p~gi 382 (425)
T 2jjq_A 310 K--RGFNVKGFDSNEFAIEMARRNVEINNVD--AEFEVASDREVSVK-GFDTVIVDP-PRAGLHPRLVKRLNREK-PGVI 382 (425)
T ss_dssp H--TTCEEEEEESCHHHHHHHHHHHHHHTCC--EEEEECCTTTCCCT-TCSEEEECC-CTTCSCHHHHHHHHHHC-CSEE
T ss_pred H--cCCEEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChHHcCcc-CCCEEEEcC-CccchHHHHHHHHHhcC-CCcE
Confidence 3 4568999999999999999999999996 99999999998765 799999999 743 233566666676 7999
Q ss_pred EEEEcccc
Q 036185 993 LHVHGNVK 1000 (1057)
Q Consensus 993 l~~~~~~~ 1000 (1057)
+++.++..
T Consensus 383 vyvsc~p~ 390 (425)
T 2jjq_A 383 VYVSCNPE 390 (425)
T ss_dssp EEEESCHH
T ss_pred EEEECChH
Confidence 99988653
No 37
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.57 E-value=7.7e-15 Score=168.11 Aligned_cols=135 Identities=13% Similarity=0.125 Sum_probs=112.6
Q ss_pred EEEEeCCEEEEEec------ceeEeeCCCHHHHHH---HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHH
Q 036185 860 VKHCENGILYSFDA------TKCMFSWGNLSEKLR---MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPC 930 (1057)
Q Consensus 860 ~~~~e~gi~~~~d~------~~~~f~~~~~~er~r---~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ 930 (1057)
++++|++++|.++. +.+||++.+..+|.. ++... ++.+|||+|||+|.+++.+|++.++.+|+++|+|+.
T Consensus 4 ~~~~Eg~~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~~-~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~ 82 (378)
T 2dul_A 4 IEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNIL-NPKIVLDALSATGIRGIRFALETPAEEVWLNDISED 82 (378)
T ss_dssp EEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHH-CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHH
T ss_pred eEEEeCcEEEEecCccccCCCCceeCCchHHHHHHHHHHHHHc-CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHH
Confidence 45789999999976 368899999999877 33333 789999999999999999996656677999999999
Q ss_pred HHHHHHHHHHHc---------------CCCccEEEEeCCccccCC--CCCccEEEECCCCCChhHHHHHHHHhhCCCcEE
Q 036185 931 AVEALKHNLQAN---------------SVSDHCIVLEGDNRFTAP--KGVANRVCLGLIPTSENSWVTAVQALRSEGGTL 993 (1057)
Q Consensus 931 ai~~~~~N~~~N---------------~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l 993 (1057)
|++.+++|+++| +++ +++++++|+.+++. ...||+|++||+.+...++..|++.|+ +||+|
T Consensus 83 av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk-~gG~l 160 (378)
T 2dul_A 83 AYELMKRNVMLNFDGELRESKGRAILKGEK-TIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAK-RRGIL 160 (378)
T ss_dssp HHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEE-EEEEE
T ss_pred HHHHHHHHHHHhcccccccccccccccCCC-ceEEEcCcHHHHHHhccCCCCEEEeCCCCCHHHHHHHHHHhcC-CCCEE
Confidence 999999999999 887 49999999988764 347999999993334788888999998 69988
Q ss_pred EEEc
Q 036185 994 HVHG 997 (1057)
Q Consensus 994 ~~~~ 997 (1057)
++.+
T Consensus 161 ~vt~ 164 (378)
T 2dul_A 161 GVTA 164 (378)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8764
No 38
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.50 E-value=1.3e-12 Score=153.19 Aligned_cols=245 Identities=18% Similarity=0.212 Sum_probs=150.3
Q ss_pred hhHHHHHHHHHHHhcCCCchHHhhcCCCceEEeCCEEEEccCCCCCchhhhHHhhHHHHHHhHcCccEEEcccccCCCCc
Q 036185 766 PFKAMTEAVASLIEQKGLSARLLEQLPSRWERLGDIVVLPVTSFKDPVWDSIGGELWPAVAKILNTSHLARQGRVAPTGT 845 (1057)
Q Consensus 766 ~~~~~~~~l~~~l~~~~~~~~~l~~lp~~~d~~gdi~vl~~~~~~~~~~~~~~~~l~~~l~~~~~~~~i~~~~~i~~~~~ 845 (1057)
..+.+...+++++++.++. +.++++-.+-...|..+++.........+ .+. +..+.+...+..+. ... +
T Consensus 168 ~~~~~~~~l~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~~~~~~l~~~~---~~~-~~~~~~~~~~~~~~-~~~---~-- 236 (433)
T 1uwv_A 168 QLEALLPKVRACLGSLQAM-RHLGHVELVQATSGTLMILRHTAPLSSAD---REK-LERFSHSEGLDLYL-APD---S-- 236 (433)
T ss_dssp HHHHHHHHHHHHHTTCGGG-GGEEEEEEEEETTEEEEEEEESSCCCHHH---HHH-HHHHHHHHTCEEEE-ESS---S--
T ss_pred HHHHHHHHHHHHHHhcCCC-CCccEEEEEEeCCCcEEEEEecCCCCHHH---HHH-HHHHhhcccEEEEE-ECC---C--
Confidence 3566777788887655432 23444433333334444443222111111 122 22233333322222 211 1
Q ss_pred cccceEEEeeCCceEEEEeCCEEEEEecceeEeeCCCHHHHHHHhh----c--cCCCCEEEEecCcccHhHHHHHHhCCC
Q 036185 846 RDSALEILVGDNGWVKHCENGILYSFDATKCMFSWGNLSEKLRMAR----L--DCKDEVIVDLFAGIGYFVLPFLVRAKA 919 (1057)
Q Consensus 846 r~~~~~~l~G~~~~~~~~e~gi~~~~d~~~~~f~~~~~~er~r~~~----~--~~~g~~VlDlf~G~G~fsl~~a~~~~a 919 (1057)
..+..++|+..... .+|++|.+++.. |.+.|..+...++. . ..++++|||+|||+|.|++++| ..+
T Consensus 237 --~~~~~l~g~~~~~~--~~g~~~~~~~~~--f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la--~~~ 308 (433)
T 1uwv_A 237 --EILETVSGEMPWYD--SNGLRLTFSPRD--FIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLA--TQA 308 (433)
T ss_dssp --SCCEEEECCCCEEE--ETTEEEECCSSS--CCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHH--TTS
T ss_pred --CeEEEEeCCCcEEE--ECCEEEEECccc--ccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHH--hhC
Confidence 23467888765544 679999999886 44655443333332 2 3567899999999999999998 336
Q ss_pred cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccEEEECCCCCC-hhHHHHHHHHhhCCCcEE
Q 036185 920 RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANRVCLGLIPTS-ENSWVTAVQALRSEGGTL 993 (1057)
Q Consensus 920 ~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~-~~~~~~a~~~l~~~gg~l 993 (1057)
.+|+|+|+++.|++.|++|++.|++. +++++++|+.+.++ ...||.|++|| |.. ...+..++..+. +++++
T Consensus 309 ~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dP-Pr~g~~~~~~~l~~~~-p~~iv 385 (433)
T 1uwv_A 309 ASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDP-ARAGAAGVMQQIIKLE-PIRIV 385 (433)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECC-CTTCCHHHHHHHHHHC-CSEEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECC-CCccHHHHHHHHHhcC-CCeEE
Confidence 78999999999999999999999997 79999999998653 24799999999 654 334444554455 68888
Q ss_pred EEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEEE
Q 036185 994 HVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHLV 1047 (1057)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~~ 1047 (1057)
++.++... + .+.+ ....+.|+.+ ..++ +-+.-|+..|+=
T Consensus 386 yvsc~p~t-----l----ard~-~~l~~~Gy~~----~~~~-~~d~Fp~t~HvE 424 (433)
T 1uwv_A 386 YVSCNPAT-----L----ARDS-EALLKAGYTI----ARLA-MLDMFPHTGHLE 424 (433)
T ss_dssp EEESCHHH-----H----HHHH-HHHHHTTCEE----EEEE-EECCSTTSSCCE
T ss_pred EEECChHH-----H----HhhH-HHHHHCCcEE----EEEE-EeccCCCCCeEE
Confidence 88776432 1 1122 2234467753 2233 335667887763
No 39
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.37 E-value=5.4e-12 Score=137.54 Aligned_cols=129 Identities=19% Similarity=0.188 Sum_probs=97.0
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEEECC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVCLGL 971 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vil~~ 971 (1057)
++.+|||++||+|.+++.+|. .+..+|+|+|+++.+++.+++|++.|++.+++.++++|+.+... ...||+|++||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~-~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLST-RTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHT-TCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHH-hcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 789999999999999999984 44448999999999999999999999998889999999998763 56899999999
Q ss_pred CCCChh-------------------------HHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 972 IPTSEN-------------------------SWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 972 ~P~~~~-------------------------~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
|.... .+..+.++|+ +||++.+..... . ...+.+++++.|+.
T Consensus 128 -Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~--~--------~~~~~~~l~~~~~~- 194 (259)
T 3lpm_A 128 -PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLK-QGGKANFVHRPE--R--------LLDIIDIMRKYRLE- 194 (259)
T ss_dssp -CC-----------------------HHHHHHHHHHHHHEE-EEEEEEEEECTT--T--------HHHHHHHHHHTTEE-
T ss_pred -CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHcc-CCcEEEEEEcHH--H--------HHHHHHHHHHCCCc-
Confidence 75432 5667777777 699888743221 1 23345556666653
Q ss_pred eeeeeEEEEeEeec
Q 036185 1027 EVTIEHIERVKWYA 1040 (1057)
Q Consensus 1027 ~~~~~~~~~Vk~~a 1040 (1057)
...++.|....
T Consensus 195 ---~~~~~~v~~~~ 205 (259)
T 3lpm_A 195 ---PKRIQFVHPRS 205 (259)
T ss_dssp ---EEEEEEEESST
T ss_pred ---eEEEEEeecCC
Confidence 33455555543
No 40
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.35 E-value=3.9e-12 Score=131.55 Aligned_cols=130 Identities=16% Similarity=0.082 Sum_probs=94.6
Q ss_pred CEEEEEecceeEeeCCCHHHHHHHhhcc-----CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH
Q 036185 866 GILYSFDATKCMFSWGNLSEKLRMARLD-----CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ 940 (1057)
Q Consensus 866 gi~~~~d~~~~~f~~~~~~er~r~~~~~-----~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~ 940 (1057)
|.++.+.. ..+.+....-+..++..+ .++.+|||++||+|.+++.++ ..++.+|+|+|+|+.+++.+++|++
T Consensus 12 g~~l~~~~--~~~rp~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~-~~~~~~v~~vD~~~~~~~~a~~~~~ 88 (189)
T 3p9n_A 12 GRRIAVPP--RGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEAL-SRGAASVLFVESDQRSAAVIARNIE 88 (189)
T ss_dssp TCEEECCS--CCC---CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHH-HTTCSEEEEEECCHHHHHHHHHHHH
T ss_pred CcEecCCC--CCCccCcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHH-HCCCCeEEEEECCHHHHHHHHHHHH
Confidence 44455444 123343333344444433 578999999999999999877 4677789999999999999999999
Q ss_pred HcCCCccEEEEeCCccccCC---CCCccEEEECCCCCCh--hH----HHHHHH--HhhCCCcEEEEEccccc
Q 036185 941 ANSVSDHCIVLEGDNRFTAP---KGVANRVCLGLIPTSE--NS----WVTAVQ--ALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 941 ~N~~~~~v~~~~~D~~~~~~---~~~~D~Vil~~~P~~~--~~----~~~a~~--~l~~~gg~l~~~~~~~~ 1001 (1057)
.+++. +++++++|+.+++. ...||+|++++ |... .. +....+ +|+ +||++++......
T Consensus 89 ~~~~~-~v~~~~~d~~~~~~~~~~~~fD~i~~~~-p~~~~~~~~~~~l~~~~~~~~L~-pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 89 ALGLS-GATLRRGAVAAVVAAGTTSPVDLVLADP-PYNVDSADVDAILAALGTNGWTR-EGTVAVVERATTC 157 (189)
T ss_dssp HHTCS-CEEEEESCHHHHHHHCCSSCCSEEEECC-CTTSCHHHHHHHHHHHHHSSSCC-TTCEEEEEEETTS
T ss_pred HcCCC-ceEEEEccHHHHHhhccCCCccEEEECC-CCCcchhhHHHHHHHHHhcCccC-CCeEEEEEecCCC
Confidence 99994 89999999988753 56799999998 6543 22 333444 555 7999988776554
No 41
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.34 E-value=1.9e-11 Score=130.35 Aligned_cols=133 Identities=16% Similarity=0.100 Sum_probs=99.9
Q ss_pred CCCHHHHHHHhhccCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc
Q 036185 880 WGNLSEKLRMARLDCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT 958 (1057)
Q Consensus 880 ~~~~~er~r~~~~~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~ 958 (1057)
++...+...+.....++++|||++|| +|.+++.++... ..+|+|+|+++.+++.+++|++.|++ +++++++|+..+
T Consensus 40 p~~~~~~l~~~~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 116 (230)
T 3evz_A 40 TTPISRYIFLKTFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGII 116 (230)
T ss_dssp CCHHHHHHHHHTTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSS
T ss_pred CCCchhhhHhHhhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhh
Confidence 55444444344556789999999999 999999998433 56799999999999999999999998 699999997543
Q ss_pred --CCCCCccEEEECCCCCC------------------------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHH
Q 036185 959 --APKGVANRVCLGLIPTS------------------------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVS 1012 (1057)
Q Consensus 959 --~~~~~~D~Vil~~~P~~------------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~ 1012 (1057)
++...||.|++|| |.. ...+..+.++|+ +||++.+...... ...
T Consensus 117 ~~~~~~~fD~I~~np-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~--------~~~ 186 (230)
T 3evz_A 117 KGVVEGTFDVIFSAP-PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLN-PGGKVALYLPDKE--------KLL 186 (230)
T ss_dssp TTTCCSCEEEEEECC-CCC---------------CCSSSCHHHHHHHHHHGGGEE-EEEEEEEEEESCH--------HHH
T ss_pred hhcccCceeEEEECC-CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhC-CCeEEEEEecccH--------hHH
Confidence 2356899999998 643 345666667777 6999888644321 113
Q ss_pred HHHHHHHHhcCCc
Q 036185 1013 KSIYEIARSEGHR 1025 (1057)
Q Consensus 1013 ~~i~~~~~~~g~~ 1025 (1057)
+.+.+.+++.|+.
T Consensus 187 ~~~~~~l~~~g~~ 199 (230)
T 3evz_A 187 NVIKERGIKLGYS 199 (230)
T ss_dssp HHHHHHHHHTTCE
T ss_pred HHHHHHHHHcCCc
Confidence 4566677778875
No 42
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.32 E-value=3.2e-11 Score=126.53 Aligned_cols=120 Identities=14% Similarity=0.175 Sum_probs=96.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++++|||++||+|.+++.+|+ . +.+|+|+|+++.+++.+++|++.+++.++++++++|+.+.++ ...||.|+++.
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~-~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCL-A-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHH-T-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCEEEEecCCCCHHHHHHHH-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 46789999999999999999984 3 567999999999999999999999998789999999998654 34799999987
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
......+..+.+.|+ +||+|.+.....+. ...+.+..++.|+.
T Consensus 131 -~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~---------~~~~~~~l~~~g~~ 173 (204)
T 3njr_A 131 -GGSQALYDRLWEWLA-PGTRIVANAVTLES---------ETLLTQLHARHGGQ 173 (204)
T ss_dssp -CCCHHHHHHHHHHSC-TTCEEEEEECSHHH---------HHHHHHHHHHHCSE
T ss_pred -cccHHHHHHHHHhcC-CCcEEEEEecCccc---------HHHHHHHHHhCCCc
Confidence 333337788888887 79999988876432 33455566667754
No 43
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.31 E-value=3.5e-11 Score=125.97 Aligned_cols=132 Identities=17% Similarity=0.113 Sum_probs=102.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++......+|+++|+++.+++.+++|++.++++ +++++++|+.+.++ ...||.|+++.
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVAR-NVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCT-TEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeCChhhhhhcCCCCCEEEECC
Confidence 46789999999999999999986544578999999999999999999999994 79999999987765 35799999987
Q ss_pred C-CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeE
Q 036185 972 I-PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVK 1037 (1057)
Q Consensus 972 ~-P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk 1037 (1057)
. +.....+..+.+.|+ +||++++....... .+.+.+.+++.|+.+ ++..+...+
T Consensus 117 ~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~---------~~~~~~~l~~~g~~~--~~~~~~~~~ 171 (204)
T 3e05_A 117 SGGMLEEIIDAVDRRLK-SEGVIVLNAVTLDT---------LTKAVEFLEDHGYMV--EVACVNVAK 171 (204)
T ss_dssp CTTCHHHHHHHHHHHCC-TTCEEEEEECBHHH---------HHHHHHHHHHTTCEE--EEEEEEEEE
T ss_pred CCcCHHHHHHHHHHhcC-CCeEEEEEeccccc---------HHHHHHHHHHCCCce--eEEEEEeec
Confidence 3 223566778888887 79999998766432 344556677788743 444444343
No 44
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.31 E-value=9.8e-12 Score=131.32 Aligned_cols=126 Identities=10% Similarity=0.118 Sum_probs=98.0
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCC-CccEE
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKG-VANRV 967 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~-~~D~V 967 (1057)
+...+.+|++|+|++||+|++++.+|+...+.+|+|+|+||.|++.|++|++.|++.++++++.+|..+.++.. .||.|
T Consensus 9 l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~I 88 (225)
T 3kr9_A 9 VASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVI 88 (225)
T ss_dssp HHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEE
T ss_pred HHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEE
Confidence 44567889999999999999999998543467899999999999999999999999988999999998877643 69988
Q ss_pred EECCCCCC--hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 968 CLGLIPTS--ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 968 il~~~P~~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
++.-.... ...+..+...|+ ++|++++....+ ...+++.+.+.|+.+
T Consensus 89 viaG~Gg~~i~~Il~~~~~~L~-~~~~lVlq~~~~-----------~~~vr~~L~~~Gf~i 137 (225)
T 3kr9_A 89 TIAGMGGRLIARILEEGLGKLA-NVERLILQPNNR-----------EDDLRIWLQDHGFQI 137 (225)
T ss_dssp EEEEECHHHHHHHHHHTGGGCT-TCCEEEEEESSC-----------HHHHHHHHHHTTEEE
T ss_pred EEcCCChHHHHHHHHHHHHHhC-CCCEEEEECCCC-----------HHHHHHHHHHCCCEE
Confidence 76432221 344555556666 689999977743 235566777788653
No 45
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=2e-11 Score=129.22 Aligned_cols=130 Identities=11% Similarity=0.085 Sum_probs=99.8
Q ss_pred HHHH-HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCC-
Q 036185 885 EKLR-MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKG- 962 (1057)
Q Consensus 885 er~r-~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~- 962 (1057)
.|.+ +...+.+|++|+|++||+|++++.+|+...+.+|+|+|+||.|++.|++|++.|++.++++++++|..+.+...
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~ 89 (230)
T 3lec_A 10 KRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEAD 89 (230)
T ss_dssp HHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccccc
Confidence 3444 44567889999999999999999998543477899999999999999999999999989999999999987643
Q ss_pred CccEEEECCCCC--ChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 963 VANRVCLGLIPT--SENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 963 ~~D~Vil~~~P~--~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
.||.|++.-.-. -...+..+...|+ ++|++++..+.+ .+.+++.+.+.|+.+
T Consensus 90 ~~D~IviaGmGg~lI~~IL~~~~~~l~-~~~~lIlqp~~~-----------~~~lr~~L~~~Gf~i 143 (230)
T 3lec_A 90 NIDTITICGMGGRLIADILNNDIDKLQ-HVKTLVLQPNNR-----------EDDLRKWLAANDFEI 143 (230)
T ss_dssp CCCEEEEEEECHHHHHHHHHHTGGGGT-TCCEEEEEESSC-----------HHHHHHHHHHTTEEE
T ss_pred ccCEEEEeCCchHHHHHHHHHHHHHhC-cCCEEEEECCCC-----------hHHHHHHHHHCCCEE
Confidence 699876432121 1333445555565 689999999765 235667777788753
No 46
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.27 E-value=4.4e-11 Score=122.98 Aligned_cols=108 Identities=14% Similarity=0.106 Sum_probs=84.3
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC--CCCCccE
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA--PKGVANR 966 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~--~~~~~D~ 966 (1057)
+...+.+|++|||++||+|.+++.+|. . +.+|+|+|++|.+++.+++|++.+++. +++++++|...+. ....||.
T Consensus 16 l~~~~~~~~~vLDiGcG~G~~~~~la~-~-~~~v~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~~~~~l~~~~~~~fD~ 92 (185)
T 3mti_A 16 LAEVLDDESIVVDATMGNGNDTAFLAG-L-SKKVYAFDVQEQALGKTSQRLSDLGIE-NTELILDGHENLDHYVREPIRA 92 (185)
T ss_dssp HHTTCCTTCEEEESCCTTSHHHHHHHT-T-SSEEEEEESCHHHHHHHHHHHHHHTCC-CEEEEESCGGGGGGTCCSCEEE
T ss_pred HHHhCCCCCEEEEEcCCCCHHHHHHHH-h-CCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCcHHHHHhhccCCcCE
Confidence 334567899999999999999999983 3 668999999999999999999999994 8999998877642 3567999
Q ss_pred EEECCCCCC--------------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 967 VCLGLIPTS--------------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 967 Vil~~~P~~--------------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
|++++ +.. ...+..+.+.|+ +||++.+..+...
T Consensus 93 v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~ 139 (185)
T 3mti_A 93 AIFNL-GYLPSADKSVITKPHTTLEAIEKILDRLE-VGGRLAIMIYYGH 139 (185)
T ss_dssp EEEEE-C-----------CHHHHHHHHHHHHHHEE-EEEEEEEEEC---
T ss_pred EEEeC-CCCCCcchhcccChhhHHHHHHHHHHhcC-CCcEEEEEEeCCC
Confidence 99884 221 133567778888 6999988877654
No 47
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.26 E-value=2.4e-11 Score=129.64 Aligned_cols=130 Identities=13% Similarity=0.118 Sum_probs=99.6
Q ss_pred HHHH-HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCC-
Q 036185 885 EKLR-MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKG- 962 (1057)
Q Consensus 885 er~r-~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~- 962 (1057)
.|.+ +...+.+|++|||++||+|++++.+|+...+.+|+|+|+||.|++.|++|++.|++.++++++++|..+.+...
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~ 89 (244)
T 3gnl_A 10 KRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKD 89 (244)
T ss_dssp HHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGG
T ss_pred HHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccc
Confidence 3444 44568889999999999999999998543467899999999999999999999999888999999999987644
Q ss_pred CccEEEECCCCC--ChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 963 VANRVCLGLIPT--SENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 963 ~~D~Vil~~~P~--~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
.||.|++.-.-. -...+..+...|+ +++++++..+.+. +.+++.+.+.|+.+
T Consensus 90 ~~D~IviagmGg~lI~~IL~~~~~~L~-~~~~lIlq~~~~~-----------~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 90 AIDTIVIAGMGGTLIRTILEEGAAKLA-GVTKLILQPNIAA-----------WQLREWSEQNNWLI 143 (244)
T ss_dssp CCCEEEEEEECHHHHHHHHHHTGGGGT-TCCEEEEEESSCH-----------HHHHHHHHHHTEEE
T ss_pred cccEEEEeCCchHHHHHHHHHHHHHhC-CCCEEEEEcCCCh-----------HHHHHHHHHCCCEE
Confidence 599877532121 1333555556665 6899999987642 34566677778653
No 48
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.25 E-value=8.1e-11 Score=122.26 Aligned_cols=110 Identities=14% Similarity=0.113 Sum_probs=90.7
Q ss_pred hhccCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC--CCCCccE
Q 036185 890 ARLDCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA--PKGVANR 966 (1057)
Q Consensus 890 ~~~~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~--~~~~~D~ 966 (1057)
...+.++++|||++||+|.+++.++... ...+|+|+|+++.+++.+++|++.+++.++++++++|+.++. ....||.
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 96 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKA 96 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEE
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceE
Confidence 3356789999999999999999998553 345899999999999999999999999778999999988774 3467999
Q ss_pred EEECCCCC---C-----------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 967 VCLGLIPT---S-----------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 967 Vil~~~P~---~-----------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
|++++ |. . ...+..+.++|+ +||++.+..+...
T Consensus 97 v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-~gG~l~~~~~~~~ 143 (197)
T 3eey_A 97 VMFNL-GYLPSGDHSISTRPETTIQALSKAMELLV-TGGIITVVIYYGG 143 (197)
T ss_dssp EEEEE-SBCTTSCTTCBCCHHHHHHHHHHHHHHEE-EEEEEEEEECCBT
T ss_pred EEEcC-CcccCcccccccCcccHHHHHHHHHHhCc-CCCEEEEEEccCC
Confidence 99987 43 1 256888888888 6999988876543
No 49
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.24 E-value=1.8e-11 Score=128.08 Aligned_cols=104 Identities=22% Similarity=0.174 Sum_probs=83.6
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC-ccEEEEeCCccccCC---CCC-ccEEEE
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS-DHCIVLEGDNRFTAP---KGV-ANRVCL 969 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~-~~v~~~~~D~~~~~~---~~~-~D~Vil 969 (1057)
++.+|||+|||+|.+++.++ ..++.+|+|+|+|+.+++.+++|++.|++. ++++++++|+.++++ ... ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEAL-SRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHH-HTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHH-HccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 68899999999999999876 356778999999999999999999999984 479999999988764 357 999999
Q ss_pred CCCCCChhHHHHHHH------HhhCCCcEEEEEccccc
Q 036185 970 GLIPTSENSWVTAVQ------ALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 970 ~~~P~~~~~~~~a~~------~l~~~gg~l~~~~~~~~ 1001 (1057)
++ |........+++ +|+ +||++++.++...
T Consensus 132 ~~-~~~~~~~~~~l~~~~~~~~Lk-pgG~l~i~~~~~~ 167 (201)
T 2ift_A 132 DP-PFHFNLAEQAISLLCENNWLK-PNALIYVETEKDK 167 (201)
T ss_dssp CC-CSSSCHHHHHHHHHHHTTCEE-EEEEEEEEEESSS
T ss_pred CC-CCCCccHHHHHHHHHhcCccC-CCcEEEEEECCCC
Confidence 99 633222223322 355 7999988887654
No 50
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=2.7e-11 Score=126.89 Aligned_cols=103 Identities=19% Similarity=0.144 Sum_probs=82.8
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEECCC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLGLI 972 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~~ 972 (1057)
++.+|||+|||+|.+++.++ ..++.+|+++|+++.+++.+++|++.+++. +++++++|+.++++ ...||+|++++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~-~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~-~v~~~~~D~~~~~~~~~~~fD~V~~~~- 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEAL-SRYAAGATLIEMDRAVSQQLIKNLATLKAG-NARVVNSNAMSFLAQKGTPHNIVFVDP- 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHH-HTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCHHHHHSSCCCCEEEEEECC-
T ss_pred CCCeEEEeCCCcCHHHHHHH-hcCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEECCHHHHHhhcCCCCCEEEECC-
Confidence 68899999999999999876 356778999999999999999999999994 79999999988654 45799999998
Q ss_pred CCChh----HHHHHHH--HhhCCCcEEEEEccccc
Q 036185 973 PTSEN----SWVTAVQ--ALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 973 P~~~~----~~~~a~~--~l~~~gg~l~~~~~~~~ 1001 (1057)
|.... .+....+ +|+ +||+|++.++...
T Consensus 131 p~~~~~~~~~l~~l~~~~~L~-pgG~l~i~~~~~~ 164 (202)
T 2fpo_A 131 PFRRGLLEETINLLEDNGWLA-DEALIYVESEVEN 164 (202)
T ss_dssp SSSTTTHHHHHHHHHHTTCEE-EEEEEEEEEEGGG
T ss_pred CCCCCcHHHHHHHHHhcCccC-CCcEEEEEECCCc
Confidence 63322 2323322 265 7999988877654
No 51
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.23 E-value=1e-10 Score=128.70 Aligned_cols=161 Identities=16% Similarity=0.084 Sum_probs=112.9
Q ss_pred CCEEEEEecceeEeeCCCHHHHH--HHhhcc-CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 865 NGILYSFDATKCMFSWGNLSEKL--RMARLD-CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~~er~--r~~~~~-~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
.|..|.+++.. |.++..++.. .++..+ .++.+|||++||+|.+++.++...+..+|+|+|+++.+++.+++|++.
T Consensus 78 ~~~~~~~~~~~--~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~ 155 (276)
T 2b3t_A 78 WSLPLFVSPAT--LIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQH 155 (276)
T ss_dssp TTEEEECCTTS--CCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH
T ss_pred CCceEEeCCCC--cccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 36677776653 3455555443 233333 567899999999999999998655566899999999999999999999
Q ss_pred cCCCccEEEEeCCccccCCCCCccEEEECCCCCCh------------------------------hHHHHHHHHhhCCCc
Q 036185 942 NSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSE------------------------------NSWVTAVQALRSEGG 991 (1057)
Q Consensus 942 N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~~------------------------------~~~~~a~~~l~~~gg 991 (1057)
+++. ++.++++|+.+.++...||.|++|| |... ..+..+.+.|+ +||
T Consensus 156 ~~~~-~v~~~~~d~~~~~~~~~fD~Iv~np-Py~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lk-pgG 232 (276)
T 2b3t_A 156 LAIK-NIHILQSDWFSALAGQQFAMIVSNP-PYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV-SGG 232 (276)
T ss_dssp HTCC-SEEEECCSTTGGGTTCCEEEEEECC-CCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEE-EEE
T ss_pred cCCC-ceEEEEcchhhhcccCCccEEEECC-CCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcC-CCC
Confidence 9987 7999999999876556799999998 6521 22445555666 699
Q ss_pred EEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCCceEE
Q 036185 992 TLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPHIRHL 1046 (1057)
Q Consensus 992 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~~~h~ 1046 (1057)
++.+...... .+.+.+.+++.|+.. ++..++++-....+
T Consensus 233 ~l~~~~~~~~----------~~~~~~~l~~~Gf~~------v~~~~d~~g~~r~~ 271 (276)
T 2b3t_A 233 FLLLEHGWQQ----------GEAVRQAFILAGYHD------VETCRDYGDNERVT 271 (276)
T ss_dssp EEEEECCSSC----------HHHHHHHHHHTTCTT------CCEEECTTSSEEEE
T ss_pred EEEEEECchH----------HHHHHHHHHHCCCcE------EEEEecCCCCCcEE
Confidence 9888644332 233455566778752 23345555444433
No 52
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.22 E-value=7.4e-11 Score=130.22 Aligned_cols=127 Identities=17% Similarity=0.130 Sum_probs=99.2
Q ss_pred CCEEEEEecceeEeeCCCHHHHH--HHhhcc--CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH
Q 036185 865 NGILYSFDATKCMFSWGNLSEKL--RMARLD--CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ 940 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~~er~--r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~ 940 (1057)
.|..|.+++.. |.++..+|.. .++..+ .++.+|||++||+|.+++.++.. ...+|+|+|+++.|++.+++|++
T Consensus 91 ~~~~~~v~~~~--lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~ 167 (284)
T 1nv8_A 91 MGLSFLVEEGV--FVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAE 167 (284)
T ss_dssp TTEEEECCTTS--CCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHH
T ss_pred CCeEEEeCCCc--eecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHH
Confidence 47788887764 3466655543 222322 36789999999999999999965 56689999999999999999999
Q ss_pred HcCCCccEEEEeCCccccCCCCCc---cEEEECCCCCCh------------------------hHHHHHH-HHhhCCCcE
Q 036185 941 ANSVSDHCIVLEGDNRFTAPKGVA---NRVCLGLIPTSE------------------------NSWVTAV-QALRSEGGT 992 (1057)
Q Consensus 941 ~N~~~~~v~~~~~D~~~~~~~~~~---D~Vil~~~P~~~------------------------~~~~~a~-~~l~~~gg~ 992 (1057)
.+++.++++++++|+.+.++ ..| |+|+.|| |+.. ..+...+ +.++ +||+
T Consensus 168 ~~~l~~~v~~~~~D~~~~~~-~~f~~~D~IvsnP-Pyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~-pgG~ 244 (284)
T 1nv8_A 168 RHGVSDRFFVRKGEFLEPFK-EKFASIEMILSNP-PYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDT-SGKI 244 (284)
T ss_dssp HTTCTTSEEEEESSTTGGGG-GGTTTCCEEEECC-CCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCC-TTCE
T ss_pred HcCCCCceEEEECcchhhcc-cccCCCCEEEEcC-CCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCC-CCCE
Confidence 99998779999999998664 368 9999998 7542 3466666 6776 7999
Q ss_pred EEEEc
Q 036185 993 LHVHG 997 (1057)
Q Consensus 993 l~~~~ 997 (1057)
+++..
T Consensus 245 l~~e~ 249 (284)
T 1nv8_A 245 VLMEI 249 (284)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88743
No 53
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.22 E-value=2.5e-10 Score=116.18 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=96.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC--CCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK--GVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~--~~~D~Vil~ 970 (1057)
..++.+|||++||+|.+++.++...+..+|+++|+++.+++.+++|++.+++.+++ ++++|+.+.++. ..||.|+++
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEEC
Confidence 46788999999999999999985444678999999999999999999999998778 899998776654 689999998
Q ss_pred CCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 971 LIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 971 ~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
........+..+.+.|+ +||++.+..+.... ...+.+..+..|..
T Consensus 102 ~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~---------~~~~~~~~~~~~~~ 146 (178)
T 3hm2_A 102 GGLTAPGVFAAAWKRLP-VGGRLVANAVTVES---------EQMLWALRKQFGGT 146 (178)
T ss_dssp C-TTCTTHHHHHHHTCC-TTCEEEEEECSHHH---------HHHHHHHHHHHCCE
T ss_pred CcccHHHHHHHHHHhcC-CCCEEEEEeecccc---------HHHHHHHHHHcCCe
Confidence 74444667888888888 79999988876533 22344455556654
No 54
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.22 E-value=7.8e-11 Score=127.75 Aligned_cols=120 Identities=18% Similarity=0.114 Sum_probs=100.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHh-CCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVR-AKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~-~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++.. ....+|+++|+++.+++.+++|++.+++.++++++++|+.+.++...||.|++++
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILDL 170 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEECS
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEECC
Confidence 467899999999999999999855 3367899999999999999999999999877999999999887777899999998
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcC
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEG 1023 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g 1023 (1057)
|.....+..+.++|+ +||++.+++...+. .+.+.+.+++.|
T Consensus 171 -~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~---------~~~~~~~l~~~g 211 (255)
T 3mb5_A 171 -PQPERVVEHAAKALK-PGGFFVAYTPCSNQ---------VMRLHEKLREFK 211 (255)
T ss_dssp -SCGGGGHHHHHHHEE-EEEEEEEEESSHHH---------HHHHHHHHHHTG
T ss_pred -CCHHHHHHHHHHHcC-CCCEEEEEECCHHH---------HHHHHHHHHHcC
Confidence 888889999999998 69999888654321 234455556666
No 55
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.20 E-value=1.1e-10 Score=126.81 Aligned_cols=147 Identities=19% Similarity=0.197 Sum_probs=107.2
Q ss_pred CCEEEEEecceeEeeCCCHHHHHH---HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 865 NGILYSFDATKCMFSWGNLSEKLR---MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~~er~r---~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
+++.+.+|+...|-.....+.+.. +.....++.+|||++||+|.+++.++ +.++ +|+|+|++|.+++.+++|++.
T Consensus 87 ~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la-~~g~-~v~gvDi~~~~v~~a~~n~~~ 164 (254)
T 2nxc_A 87 AEIPLVIEPGMAFGTGHHETTRLALKALARHLRPGDKVLDLGTGSGVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKR 164 (254)
T ss_dssp SSEEEECCCC-----CCSHHHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHH
T ss_pred CceEEEECCCccccCCCCHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHH-HhCC-eEEEEECCHHHHHHHHHHHHH
Confidence 466778888754322222332221 11235688999999999999999987 4566 899999999999999999999
Q ss_pred cCCCccEEEEeCCccccCCCCCccEEEECCCCCC-hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHH
Q 036185 942 NSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTS-ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIAR 1020 (1057)
Q Consensus 942 N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 1020 (1057)
|++. +.++++|+.+.++...||+|+++++... ...+..+.+.|+ +||++++.+..... .+.+.++++
T Consensus 165 ~~~~--v~~~~~d~~~~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~Lk-pgG~lils~~~~~~---------~~~v~~~l~ 232 (254)
T 2nxc_A 165 NGVR--PRFLEGSLEAALPFGPFDLLVANLYAELHAALAPRYREALV-PGGRALLTGILKDR---------APLVREAMA 232 (254)
T ss_dssp TTCC--CEEEESCHHHHGGGCCEEEEEEECCHHHHHHHHHHHHHHEE-EEEEEEEEEEEGGG---------HHHHHHHHH
T ss_pred cCCc--EEEEECChhhcCcCCCCCEEEECCcHHHHHHHHHHHHHHcC-CCCEEEEEeeccCC---------HHHHHHHHH
Confidence 9986 8999999988655567999999973322 345666677777 79999998876543 345666777
Q ss_pred hcCCc
Q 036185 1021 SEGHR 1025 (1057)
Q Consensus 1021 ~~g~~ 1025 (1057)
+.|+.
T Consensus 233 ~~Gf~ 237 (254)
T 2nxc_A 233 GAGFR 237 (254)
T ss_dssp HTTCE
T ss_pred HCCCE
Confidence 78875
No 56
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.20 E-value=1.8e-10 Score=118.32 Aligned_cols=135 Identities=24% Similarity=0.255 Sum_probs=103.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC-CCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK-GVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~-~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++. .+ .+|+++|+++.+++.+++|++.+++..++.++++|+.+.++. ..||+|+++.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 108 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAG-RV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGG 108 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHT-TS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHH-hc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECC
Confidence 46788999999999999999983 34 789999999999999999999999966899999999885553 5799999987
Q ss_pred C-CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecC
Q 036185 972 I-PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAP 1041 (1057)
Q Consensus 972 ~-P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP 1041 (1057)
+ +.....+..+.++|+ +||++++..+.... ...+.+.+++.|+.+ ++..+...+.+..
T Consensus 109 ~~~~~~~~l~~~~~~l~-~gG~l~~~~~~~~~---------~~~~~~~l~~~g~~~--~~~~~~~~~~~~~ 167 (192)
T 1l3i_A 109 SGGELQEILRIIKDKLK-PGGRIIVTAILLET---------KFEAMECLRDLGFDV--NITELNIARGRAL 167 (192)
T ss_dssp CTTCHHHHHHHHHHTEE-EEEEEEEEECBHHH---------HHHHHHHHHHTTCCC--EEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHHHhcC-CCcEEEEEecCcch---------HHHHHHHHHHCCCce--EEEEEEcccCeEe
Confidence 4 334566777777787 69999888765422 345566777888754 4444444444433
No 57
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=2.7e-10 Score=116.24 Aligned_cols=120 Identities=21% Similarity=0.257 Sum_probs=93.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.+++.++ ....+|+++|+++.+++.+++|++.+++. ++.++++|+.+.++...||.|+++.+
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIA--KRCKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAEDVLDKLEFNKAFIGGT 109 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHH--TTSSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHHHGGGCCCSEEEECSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHH--hcCCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccccccCCCCcEEEECCc
Confidence 3578899999999999999998 36678999999999999999999999985 79999999988665567999999984
Q ss_pred CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCcee
Q 036185 973 PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 973 P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 1027 (1057)
......+..+.++ +||.+++..+.... ...+.+.+++.|+.++
T Consensus 110 ~~~~~~l~~~~~~---~gG~l~~~~~~~~~---------~~~~~~~l~~~g~~~~ 152 (183)
T 2yxd_A 110 KNIEKIIEILDKK---KINHIVANTIVLEN---------AAKIINEFESRGYNVD 152 (183)
T ss_dssp SCHHHHHHHHHHT---TCCEEEEEESCHHH---------HHHHHHHHHHTTCEEE
T ss_pred ccHHHHHHHHhhC---CCCEEEEEeccccc---------HHHHHHHHHHcCCeEE
Confidence 2223334444433 69999888765432 3446667778886544
No 58
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.19 E-value=2.1e-10 Score=118.01 Aligned_cols=133 Identities=19% Similarity=0.241 Sum_probs=103.3
Q ss_pred CCEEEEEecceeEeeCCCH-HHHHHHhhcc--CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 865 NGILYSFDATKCMFSWGNL-SEKLRMARLD--CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~-~er~r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
.|..+.++....+|.+... .....++..+ .++.+|||++||+|.+++.++.. ..+|+++|+++.+++.+++|+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~ 96 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKL 96 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHH
Confidence 4677777666555666532 2334455443 47889999999999999999843 56799999999999999999999
Q ss_pred cCCCc-cEEEEeCCccccCCCCCccEEEECCCCCC------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 942 NSVSD-HCIVLEGDNRFTAPKGVANRVCLGLIPTS------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 942 N~~~~-~v~~~~~D~~~~~~~~~~D~Vil~~~P~~------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
+++.+ ++.++++|+.+.++...||.|++++ |.. ...+..+.++|+ +||++++......
T Consensus 97 ~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~-~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~ 161 (194)
T 1dus_A 97 NNLDNYDIRVVHSDLYENVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLK-DNGEIWVVIQTKQ 161 (194)
T ss_dssp TTCTTSCEEEEECSTTTTCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEE-EEEEEEEEEESTH
T ss_pred cCCCccceEEEECchhcccccCCceEEEECC-CcccchhHHHHHHHHHHHHcC-CCCEEEEEECCCC
Confidence 99874 4999999998877666899999998 533 244666677777 7999999888764
No 59
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.18 E-value=2.1e-10 Score=121.06 Aligned_cols=120 Identities=14% Similarity=0.116 Sum_probs=93.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil~ 970 (1057)
.++.+|||++||+|.+++.+|.......|+|+|+++.+++.+++|++.+++. ++.++++|+.++. +...||.|+++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~D~i~~~ 118 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVP-NIKLLWVDGSDLTDYFEDGEIDRLYLN 118 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCS-SEEEEECCSSCGGGTSCTTCCSEEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCCCCCCEEEEE
Confidence 4578999999999999999986544568999999999999999999999995 7999999998753 35579999999
Q ss_pred CCCCC-------------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 971 LIPTS-------------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 971 ~~P~~-------------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
+ |.. ...+..+.++|+ +||+|++.+.... . .+.+.+.+++.|+.
T Consensus 119 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~-----~----~~~~~~~~~~~g~~ 175 (214)
T 1yzh_A 119 F-SDPWPKKRHEKRRLTYKTFLDTFKRILP-ENGEIHFKTDNRG-----L----FEYSLVSFSQYGMK 175 (214)
T ss_dssp S-CCCCCSGGGGGGSTTSHHHHHHHHHHSC-TTCEEEEEESCHH-----H----HHHHHHHHHHHTCE
T ss_pred C-CCCccccchhhhccCCHHHHHHHHHHcC-CCcEEEEEeCCHH-----H----HHHHHHHHHHCCCe
Confidence 7 542 356777788887 7999988653211 1 23444455566764
No 60
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.17 E-value=5.4e-11 Score=121.36 Aligned_cols=107 Identities=17% Similarity=0.174 Sum_probs=86.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~ 970 (1057)
..++.+|||++||+|.+++.++. .++.+|+++|+++.+++.+++|++.+++.++++++++|+.+.++ ...||.|+++
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~ 107 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVS-RGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLD 107 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHH-TTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEEC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEEC
Confidence 35788999999999999999984 46678999999999999999999999997789999999988643 3569999999
Q ss_pred CCCCChhHHHHHH------HHhhCCCcEEEEEcccccc
Q 036185 971 LIPTSENSWVTAV------QALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 971 ~~P~~~~~~~~a~------~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+ |.........+ ++|+ +||++.+.......
T Consensus 108 ~-~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 108 P-PYAKETIVATIEALAAKNLLS-EQVMVVCETDKTVL 143 (177)
T ss_dssp C-SSHHHHHHHHHHHHHHTTCEE-EEEEEEEEEETTCC
T ss_pred C-CCCcchHHHHHHHHHhCCCcC-CCcEEEEEECCccc
Confidence 8 75333333333 4455 79999988776543
No 61
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.17 E-value=4.1e-11 Score=123.10 Aligned_cols=106 Identities=16% Similarity=0.137 Sum_probs=84.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~Vi 968 (1057)
.++.+|||++||+|.+++.++ ..++.+|+++|+++.+++.+++|++.+++.++++++++|+.+.++ ...||.|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAV-SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHH-HcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 478899999999999999887 456678999999999999999999999987789999999988653 46799999
Q ss_pred ECCCCCChh----HHHHH--HHHhhCCCcEEEEEcccccc
Q 036185 969 LGLIPTSEN----SWVTA--VQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 969 l~~~P~~~~----~~~~a--~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+++ |.... .+... .++|+ +||++++.......
T Consensus 122 ~~~-~~~~~~~~~~~~~l~~~~~L~-~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 122 LDP-PYAKQEIVSQLEKMLERQLLT-NEAVIVCETDKTVK 159 (187)
T ss_dssp ECC-CGGGCCHHHHHHHHHHTTCEE-EEEEEEEEEETTCC
T ss_pred ECC-CCCchhHHHHHHHHHHhcccC-CCCEEEEEeCCccc
Confidence 998 63322 22222 33455 79999888776543
No 62
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.17 E-value=1.5e-10 Score=124.59 Aligned_cols=123 Identities=11% Similarity=0.022 Sum_probs=96.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRVCL 969 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~Vil 969 (1057)
.++.+|||++||+|.+++.+|......+|+++|+++.+++.+++|++.+++. +++++++|+.++.. ...||.|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhcccccccCCccEEEE
Confidence 3578999999999999999985445568999999999999999999999997 59999999988652 357999999
Q ss_pred CCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 970 GLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 970 ~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
..+......+..+.++|+ +||+++++...... +-.+.+.+.++..|+.
T Consensus 148 ~~~~~~~~~l~~~~~~Lk-pgG~l~~~~g~~~~-------~~~~~~~~~l~~~g~~ 195 (240)
T 1xdz_A 148 RAVARLSVLSELCLPLVK-KNGLFVALKAASAE-------EELNAGKKAITTLGGE 195 (240)
T ss_dssp ECCSCHHHHHHHHGGGEE-EEEEEEEEECC-CH-------HHHHHHHHHHHHTTEE
T ss_pred eccCCHHHHHHHHHHhcC-CCCEEEEEeCCCch-------HHHHHHHHHHHHcCCe
Confidence 886655666777778888 69998887433221 1134455667777764
No 63
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.17 E-value=2e-10 Score=126.37 Aligned_cols=106 Identities=16% Similarity=0.104 Sum_probs=93.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~ 971 (1057)
+.++.+|||++||+|.+++.++...+ ..+|+++|+++.+++.+++|++.+++.+++.++.+|+.+.++...||+|++++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~~ 189 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLDV 189 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEECC
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEECC
Confidence 45788999999999999999985523 56899999999999999999999998668999999999887666899999998
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|.....+..+.++|+ +||+|.++....
T Consensus 190 -~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 216 (277)
T 1o54_A 190 -PDPWNYIDKCWEALK-GGGRFATVCPTT 216 (277)
T ss_dssp -SCGGGTHHHHHHHEE-EEEEEEEEESSH
T ss_pred -cCHHHHHHHHHHHcC-CCCEEEEEeCCH
Confidence 888888999999998 699999887653
No 64
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.16 E-value=2.5e-10 Score=130.95 Aligned_cols=135 Identities=20% Similarity=0.127 Sum_probs=102.4
Q ss_pred eCCEEEEEecceeEeeCCCHH-HHHHHhhcc--CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH
Q 036185 864 ENGILYSFDATKCMFSWGNLS-EKLRMARLD--CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ 940 (1057)
Q Consensus 864 e~gi~~~~d~~~~~f~~~~~~-er~r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~ 940 (1057)
+.++++..++.. |++.... ....+++.+ ..+.+|||+|||+|.+++.+++.....+|+++|+++.+++.+++|++
T Consensus 190 ~~~~~~~~~pg~--Fs~~~~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~ 267 (375)
T 4dcm_A 190 GTDWTIHNHANV--FSRTGLDIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVE 267 (375)
T ss_dssp TTTEEEEECTTC--TTCSSCCHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCceEEEeCCCc--ccCCcccHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHH
Confidence 345666666654 4443322 233344443 34689999999999999999955446689999999999999999999
Q ss_pred HcCCCc--cEEEEeCCccccCCCCCccEEEECCCCCC----------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 941 ANSVSD--HCIVLEGDNRFTAPKGVANRVCLGLIPTS----------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 941 ~N~~~~--~v~~~~~D~~~~~~~~~~D~Vil~~~P~~----------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
.|++.+ +++++.+|+.+.++...||.|++|| |.. ...+..+.+.|+ +||++++..+.+..
T Consensus 268 ~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np-pfh~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~iv~n~~~~ 339 (375)
T 4dcm_A 268 TNMPEALDRCEFMINNALSGVEPFRFNAVLCNP-PFHQQHALTDNVAWEMFHHARRCLK-INGELYIVANRHLD 339 (375)
T ss_dssp HHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC-CC-------CCHHHHHHHHHHHHEE-EEEEEEEEEETTSC
T ss_pred HcCCCcCceEEEEechhhccCCCCCeeEEEECC-CcccCcccCHHHHHHHHHHHHHhCC-CCcEEEEEEECCcC
Confidence 999864 5889999999877777899999998 643 134777888888 69999998877654
No 65
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.15 E-value=1.4e-10 Score=127.39 Aligned_cols=107 Identities=20% Similarity=0.213 Sum_probs=89.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~ 966 (1057)
..+|++|||++||+|.+++.+|... +..+|+|+|+++.+++.+++|++.+++. +++++++|+.++.. ...||+
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhhhccccCCE
Confidence 5688999999999999999998543 4468999999999999999999999997 79999999987653 457999
Q ss_pred EEECCCCCC-----------------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 967 VCLGLIPTS-----------------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 967 Vil~~~P~~-----------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|++|+ |.+ ...+..+.+.|+ +||+|++.+|+...
T Consensus 160 Vl~d~-Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~stcs~~~ 216 (274)
T 3ajd_A 160 ILLDA-PCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLK-KDGELVYSTCSMEV 216 (274)
T ss_dssp EEEEE-CCC------------HHHHTGGGTCHHHHHHHHHHHEE-EEEEEEEEESCCCT
T ss_pred EEEcC-CCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEECCCCh
Confidence 99998 543 344666777887 79999998887643
No 66
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.15 E-value=2.6e-10 Score=119.23 Aligned_cols=146 Identities=14% Similarity=0.095 Sum_probs=104.1
Q ss_pred CEEEEEecceeEeeCCCHHHHHHHhh----ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 866 GILYSFDATKCMFSWGNLSEKLRMAR----LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 866 gi~~~~d~~~~~f~~~~~~er~r~~~----~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
...+.+|+.. .|..+.......++. ...++.+|||++||+|.+++.++ +.+..+|+++|+++.+++.+++|++.
T Consensus 28 ~~~~~~~~~~-~f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~~ 105 (205)
T 3grz_A 28 QEIIRLDPGL-AFGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAH-KLGAKSVLATDISDESMTAAEENAAL 105 (205)
T ss_dssp CEEEEESCC------CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHH
T ss_pred ceeEEecCCc-ccCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 4556666653 344444333333332 25678999999999999999987 45677899999999999999999999
Q ss_pred cCCCccEEEEeCCccccCCCCCccEEEECCCCCC-hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHH
Q 036185 942 NSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTS-ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIAR 1020 (1057)
Q Consensus 942 N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 1020 (1057)
+++.+ ++++++|+.+..+ ..||.|+++++... ...+..+.++|+ +||++.+.++.... .+.+.+.++
T Consensus 106 ~~~~~-v~~~~~d~~~~~~-~~fD~i~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~---------~~~~~~~~~ 173 (205)
T 3grz_A 106 NGIYD-IALQKTSLLADVD-GKFDLIVANILAEILLDLIPQLDSHLN-EDGQVIFSGIDYLQ---------LPKIEQALA 173 (205)
T ss_dssp TTCCC-CEEEESSTTTTCC-SCEEEEEEESCHHHHHHHGGGSGGGEE-EEEEEEEEEEEGGG---------HHHHHHHHH
T ss_pred cCCCc-eEEEeccccccCC-CCceEEEECCcHHHHHHHHHHHHHhcC-CCCEEEEEecCccc---------HHHHHHHHH
Confidence 99975 9999999988654 67999999983221 233455555666 79999997766543 334556677
Q ss_pred hcCCc
Q 036185 1021 SEGHR 1025 (1057)
Q Consensus 1021 ~~g~~ 1025 (1057)
+.|+.
T Consensus 174 ~~Gf~ 178 (205)
T 3grz_A 174 ENSFQ 178 (205)
T ss_dssp HTTEE
T ss_pred HcCCc
Confidence 77764
No 67
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.15 E-value=2.1e-10 Score=124.06 Aligned_cols=123 Identities=15% Similarity=0.081 Sum_probs=96.4
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRVCL 969 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~Vil 969 (1057)
.++.+|||++||+|.+++.+|......+|+++|+++.+++.+++|++.+++. +++++++|+.++.. ...||.|+.
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhcccccCCCceEEEE
Confidence 4678999999999999999986555678999999999999999999999997 59999999998764 367999999
Q ss_pred CCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 970 GLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 970 ~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
.-+......+..+.++|+ +||.+.+.......++ +..+..+++..|+.
T Consensus 158 ~a~~~~~~ll~~~~~~Lk-pgG~l~~~~g~~~~~e-------~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 158 RAVAPLCVLSELLLPFLE-VGGAAVAMKGPRVEEE-------LAPLPPALERLGGR 205 (249)
T ss_dssp ESSCCHHHHHHHHGGGEE-EEEEEEEEECSCCHHH-------HTTHHHHHHHHTEE
T ss_pred CCcCCHHHHHHHHHHHcC-CCeEEEEEeCCCcHHH-------HHHHHHHHHHcCCe
Confidence 875555566777777887 6998887665432211 33455566667764
No 68
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.15 E-value=2e-10 Score=125.20 Aligned_cols=102 Identities=25% Similarity=0.232 Sum_probs=84.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH---cCCCccEEEEeCCccccC--------CCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA---NSVSDHCIVLEGDNRFTA--------PKG 962 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~---N~~~~~v~~~~~D~~~~~--------~~~ 962 (1057)
.++.+|||++||+|.+++.++.+....+|+++|+++.+++.+++|++. |++.+++.++++|+.++. +..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 467899999999999999998654456899999999999999999999 999888999999998872 356
Q ss_pred CccEEEECCCCCCh-----------------------hHHHHHHHHhhCCCcEEEEEc
Q 036185 963 VANRVCLGLIPTSE-----------------------NSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 963 ~~D~Vil~~~P~~~-----------------------~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
.||+|++|| |... ..+..+.++|+ +||++.+..
T Consensus 115 ~fD~Vv~nP-Py~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~ 170 (260)
T 2ozv_A 115 HFHHVIMNP-PYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMV-SGGQLSLIS 170 (260)
T ss_dssp CEEEEEECC-CC---------------------CCHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred CcCEEEECC-CCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcC-CCCEEEEEE
Confidence 799999998 7543 23556667777 699887743
No 69
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.14 E-value=4.3e-10 Score=120.13 Aligned_cols=99 Identities=20% Similarity=0.143 Sum_probs=82.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccc----cCCCCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRF----TAPKGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~----~~~~~~~D~Vi 968 (1057)
+.++++|||++||+|.+++.+|...+..+|+|+|+++.+++.+++|++.+ .++.++.+|+.+ ......||.|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTTTSCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccccCccEEEEE
Confidence 35789999999999999999986556578999999999999999998876 379999999987 33335799999
Q ss_pred ECCCCCC---hhHHHHHHHHhhCCCcEEEEE
Q 036185 969 LGLIPTS---ENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 969 l~~~P~~---~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
.++ |.. ...+..+.+.|+ +||++++.
T Consensus 149 ~~~-~~~~~~~~~l~~~~~~Lk-pgG~l~i~ 177 (230)
T 1fbn_A 149 EDV-AQPNQAEILIKNAKWFLK-KGGYGMIA 177 (230)
T ss_dssp ECC-CSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred Eec-CChhHHHHHHHHHHHhCC-CCcEEEEE
Confidence 887 665 555888888888 69988886
No 70
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.14 E-value=1.5e-10 Score=135.09 Aligned_cols=123 Identities=21% Similarity=0.212 Sum_probs=96.9
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
...+|++|||++||+|..++.+|... +..+|+|+|+++.+++.+++|++.+++. ++.++++|+.++.. ...||+|+
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~~~~~~FD~Il 180 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVPHFSGFFDRIV 180 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHHHHTTCEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhhhccccCCEEE
Confidence 35789999999999999999998543 3468999999999999999999999997 69999999988652 46799999
Q ss_pred ECCCCCCh---------------------------hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHh
Q 036185 969 LGLIPTSE---------------------------NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARS 1021 (1057)
Q Consensus 969 l~~~P~~~---------------------------~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 1021 (1057)
+|+ |-+. ..+..|.++|+ +||+|++.+|+-..++. .+.+...+++
T Consensus 181 ~Da-PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvYsTCs~~~eEn------e~vv~~~l~~ 252 (456)
T 3m4x_A 181 VDA-PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLK-NKGQLIYSTCTFAPEEN------EEIISWLVEN 252 (456)
T ss_dssp EEC-CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEE-EEEEEEEEESCCCGGGT------HHHHHHHHHH
T ss_pred ECC-CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEEeecccccC------HHHHHHHHHh
Confidence 999 6220 33666777777 79999999997654331 2334555566
Q ss_pred cC
Q 036185 1022 EG 1023 (1057)
Q Consensus 1022 ~g 1023 (1057)
++
T Consensus 253 ~~ 254 (456)
T 3m4x_A 253 YP 254 (456)
T ss_dssp SS
T ss_pred CC
Confidence 66
No 71
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.12 E-value=3.3e-10 Score=120.28 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=101.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~V 967 (1057)
+++|++|||++||+|+++.++|..-| ..+|+|+|++|++++.|+++++.. .|+.++.+|+..... ...+|.|
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccccccceEEEE
Confidence 57999999999999999999996544 458999999999999999987654 278999999876432 4568999
Q ss_pred EECCCCCCh---hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCC-c
Q 036185 968 CLGLIPTSE---NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPH-I 1043 (1057)
Q Consensus 968 il~~~P~~~---~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~-~ 1043 (1057)
+++. +.+. ..+..+.+.|+ +||.+.+.......+...+.....+...+..++.|+.+ ..+.+..|. .
T Consensus 152 f~d~-~~~~~~~~~l~~~~r~LK-pGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l-------~e~i~L~pf~~ 222 (233)
T 4df3_A 152 YADV-AQPEQAAIVVRNARFFLR-DGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEI-------KDVVHLDPFDR 222 (233)
T ss_dssp EECC-CCTTHHHHHHHHHHHHEE-EEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCE-------EEEEECTTTST
T ss_pred EEec-cCChhHHHHHHHHHHhcc-CCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEE-------EEEEccCCCCC
Confidence 9987 6553 45777888888 69988876544433221111223344445566788864 123356664 3
Q ss_pred eEEEE
Q 036185 1044 RHLVA 1048 (1057)
Q Consensus 1044 ~h~~~ 1048 (1057)
.|+.+
T Consensus 223 ~H~lv 227 (233)
T 4df3_A 223 DHAMI 227 (233)
T ss_dssp TEEEE
T ss_pred ceEEE
Confidence 46554
No 72
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.12 E-value=1.9e-10 Score=126.45 Aligned_cols=121 Identities=12% Similarity=0.034 Sum_probs=99.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHh-CCCcEEEEEecCHHHHHHHHHHHHHc-CCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVR-AKARLVYACEWNPCAVEALKHNLQAN-SVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~-~~a~~V~avD~n~~ai~~~~~N~~~N-~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
..++++|||++||+|.+++.++.. ....+|+++|+++.+++.+++|++.+ +.. +++++++|+.+.++...||+|+++
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~-~v~~~~~d~~~~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIG-NVRTSRSDIADFISDQMYDAVIAD 186 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCT-TEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCC-cEEEEECchhccCcCCCccEEEEc
Confidence 467899999999999999999854 23568999999999999999999999 865 799999999986666689999998
Q ss_pred CCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 971 LIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 971 ~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
+ |.....+..+.++|+ +||+|++.+..... .+.+.+.+++.|+.
T Consensus 187 ~-~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~---------~~~~~~~l~~~Gf~ 230 (275)
T 1yb2_A 187 I-PDPWNHVQKIASMMK-PGSVATFYLPNFDQ---------SEKTVLSLSASGMH 230 (275)
T ss_dssp C-SCGGGSHHHHHHTEE-EEEEEEEEESSHHH---------HHHHHHHSGGGTEE
T ss_pred C-cCHHHHHHHHHHHcC-CCCEEEEEeCCHHH---------HHHHHHHHHHCCCe
Confidence 8 888888999999998 69999998865421 23344455566754
No 73
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.12 E-value=1.4e-09 Score=113.81 Aligned_cols=115 Identities=22% Similarity=0.142 Sum_probs=86.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++ ..++.+|+|+|+++.+++.+++|++.+++ +++++++|+.++. ..||.|++|| |
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~-~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~~~D~v~~~~-p 121 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGAL-LLGAKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--SRVDIVIMNP-P 121 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC--CCCSEEEECC-C
T ss_pred CCcCEEEEeeCCCCHHHHHHH-HcCCCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC--CCCCEEEEcC-C
Confidence 468899999999999999998 45667899999999999999999999998 6999999999863 4799999999 6
Q ss_pred CC-------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 974 TS-------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 974 ~~-------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
.. ...+..+.+.+ |+ +++.+..... ..+.+.+.+++.|+.+
T Consensus 122 ~~~~~~~~~~~~l~~~~~~l---~~-~~~~~~~~~~--------~~~~~~~~l~~~g~~~ 169 (207)
T 1wy7_A 122 FGSQRKHADRPFLLKAFEIS---DV-VYSIHLAKPE--------VRRFIEKFSWEHGFVV 169 (207)
T ss_dssp CSSSSTTTTHHHHHHHHHHC---SE-EEEEEECCHH--------HHHHHHHHHHHTTEEE
T ss_pred CccccCCchHHHHHHHHHhc---Cc-EEEEEeCCcC--------CHHHHHHHHHHCCCeE
Confidence 32 24455555555 44 4444422211 1344556667778654
No 74
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.12 E-value=4.6e-10 Score=125.82 Aligned_cols=108 Identities=15% Similarity=0.165 Sum_probs=89.6
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCL 969 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil 969 (1057)
...+|++|||++||+|.+++.+|... +..+|+|+|+++.+++.+++|++.+++. +++++++|+.++.. ...||+|++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~~~~~fD~Il~ 193 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGELNVEFDKILL 193 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGGGCCCEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhcccccccCCEEEE
Confidence 35788999999999999999998553 3468999999999999999999999997 69999999988753 457999999
Q ss_pred CCCCCC---------------------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 970 GLIPTS---------------------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 970 ~~~P~~---------------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|+ |-+ ...+..+.++|+ +||+|++.+|+-..
T Consensus 194 d~-Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lk-pGG~lv~stcs~~~ 251 (315)
T 1ixk_A 194 DA-PCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLK-PGGILVYSTCSLEP 251 (315)
T ss_dssp EC-CTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCCG
T ss_pred eC-CCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEEeCCCCh
Confidence 98 522 245677778887 79999998887543
No 75
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.11 E-value=7.6e-10 Score=116.80 Aligned_cols=103 Identities=14% Similarity=0.186 Sum_probs=84.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---CCCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---APKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---~~~~~~D~Vil~ 970 (1057)
.++.+|||++||+|.+++.+|+......|+|+|+++.+++.+++|++.+++. ++.++++|+.++ ++...+|.|+++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 3578999999999999999986554568999999999999999999999986 799999999875 335679999886
Q ss_pred CC-CC-----------ChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 971 LI-PT-----------SENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 971 ~~-P~-----------~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.+ |. ....+..+.++|+ +||.|++.+.
T Consensus 116 ~~~p~~~~~~~~~rl~~~~~l~~~~~~Lk-pgG~l~~~td 154 (213)
T 2fca_A 116 FSDPWPKKRHEKRRLTYSHFLKKYEEVMG-KGGSIHFKTD 154 (213)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHT-TSCEEEEEES
T ss_pred CCCCCcCccccccccCcHHHHHHHHHHcC-CCCEEEEEeC
Confidence 41 21 1356788888888 7999998764
No 76
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.09 E-value=2.9e-10 Score=132.82 Aligned_cols=107 Identities=23% Similarity=0.151 Sum_probs=88.7
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
...+|++|||++||+|++++.+|...+ ..+|+|+|+++.+++.+++|++.+|+. +.++++|+.++.. ...||+|+
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~~~~~~FD~Il 175 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAEAFGTYFHRVL 175 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHHHHCSCEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhhhccccCCEEE
Confidence 356899999999999999999986543 358999999999999999999999996 9999999988652 56799999
Q ss_pred ECCCCCC---------------------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 969 LGLIPTS---------------------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 969 l~~~P~~---------------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+|+ |.+ ...+..|.++|+ +||+|.+.+|+-..
T Consensus 176 ~D~-PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lk-pGG~LvysTCs~~~ 234 (464)
T 3m6w_A 176 LDA-PCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLG-PGGVLVYSTCTFAP 234 (464)
T ss_dssp EEC-CCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESCCCG
T ss_pred ECC-CcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeccCch
Confidence 999 642 233566667777 79999999887654
No 77
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.09 E-value=5.5e-10 Score=119.46 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=82.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC----CCCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA----PKGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~----~~~~~D~V 967 (1057)
+.++++|||++||+|.+++.++...+ ..+|+|+|+++.+++.+.++++.| .+++++++|+.+.. ....||+|
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhcccCCcEEEE
Confidence 45789999999999999999986543 468999999999999999999988 37999999998742 24579999
Q ss_pred EECCCCCChh---HHHHHHHHhhCCCcEEEEEccc
Q 036185 968 CLGLIPTSEN---SWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 968 il~~~P~~~~---~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
++++ |.... .+..+.+.|+ +||++++....
T Consensus 152 ~~~~-~~~~~~~~~~~~~~~~Lk-pgG~l~i~~~~ 184 (233)
T 2ipx_A 152 FADV-AQPDQTRIVALNAHTFLR-NGGHFVISIKA 184 (233)
T ss_dssp EECC-CCTTHHHHHHHHHHHHEE-EEEEEEEEEEH
T ss_pred EEcC-CCccHHHHHHHHHHHHcC-CCeEEEEEEcc
Confidence 9998 55422 3666888888 69999985544
No 78
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.09 E-value=1.9e-10 Score=116.12 Aligned_cols=127 Identities=16% Similarity=0.108 Sum_probs=92.9
Q ss_pred CEEEEEecceeEeeCCCHHHHHHHhhcc----CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 866 GILYSFDATKCMFSWGNLSEKLRMARLD----CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 866 gi~~~~d~~~~~f~~~~~~er~r~~~~~----~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
|.++...+. +.+....-+..++..+ .++.+|||++||+|.+++.++ ..+.. |+++|+++.+++.+++|++.
T Consensus 11 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~-~~~~~-v~~vD~~~~~~~~a~~~~~~ 85 (171)
T 1ws6_A 11 GVALKVPAS---ARPSPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAA-SEGWE-AVLVEKDPEAVRLLKENVRR 85 (171)
T ss_dssp TCEECCCTT---CCCCCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHH-HTTCE-EEEECCCHHHHHHHHHHHHH
T ss_pred CeEecCCCC---CCCCHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHH-HCCCe-EEEEeCCHHHHHHHHHHHHH
Confidence 455555555 3343333343444432 278899999999999999998 45555 99999999999999999999
Q ss_pred cCCCccEEEEeCCccccCC-----CCCccEEEECCCCCC---hhHHHHHH--HHhhCCCcEEEEEccccc
Q 036185 942 NSVSDHCIVLEGDNRFTAP-----KGVANRVCLGLIPTS---ENSWVTAV--QALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 942 N~~~~~v~~~~~D~~~~~~-----~~~~D~Vil~~~P~~---~~~~~~a~--~~l~~~gg~l~~~~~~~~ 1001 (1057)
+++ +++++++|+.+.++ ...||.|++++ |.. ...+.... ++|+ +||++++......
T Consensus 86 ~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~-~~~~~~~~~~~~~~~~~~L~-~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 86 TGL--GARVVALPVEVFLPEAKAQGERFTVAFMAP-PYAMDLAALFGELLASGLVE-AGGLYVLQHPKDL 151 (171)
T ss_dssp HTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECC-CTTSCTTHHHHHHHHHTCEE-EEEEEEEEEETTS
T ss_pred cCC--ceEEEeccHHHHHHhhhccCCceEEEEECC-CCchhHHHHHHHHHhhcccC-CCcEEEEEeCCcc
Confidence 998 69999999988643 23799999998 542 33344444 5566 7999988777654
No 79
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.08 E-value=2.4e-10 Score=131.13 Aligned_cols=102 Identities=24% Similarity=0.239 Sum_probs=87.3
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC-CCccEEEECCCC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK-GVANRVCLGLIP 973 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~-~~~D~Vil~~~P 973 (1057)
++.+|||++||+|.+++.+++ .++ +|+++|+|+.+++.+++|++.|++. ++++++|+.+.... ..||.|++|| |
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~-~g~-~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~D~~~~~~~~~~fD~Ii~np-p 307 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLAR-MGA-EVVGVEDDLASVLSLQKGLEANALK--AQALHSDVDEALTEEARFDIIVTNP-P 307 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHH-TTC-EEEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTSCTTCCEEEEEECC-C
T ss_pred CCCEEEEEeeeCCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHcCCC--eEEEEcchhhccccCCCeEEEEECC-c
Confidence 688999999999999999984 454 7999999999999999999999985 89999999988764 6899999998 5
Q ss_pred CCh----------hHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 974 TSE----------NSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 974 ~~~----------~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
... ..+..+.+.|+ +||++++..+.+..
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~Lk-pGG~l~iv~n~~l~ 345 (381)
T 3dmg_A 308 FHVGGAVILDVAQAFVNVAAARLR-PGGVFFLVSNPFLK 345 (381)
T ss_dssp CCTTCSSCCHHHHHHHHHHHHHEE-EEEEEEEEECTTSC
T ss_pred hhhcccccHHHHHHHHHHHHHhcC-cCcEEEEEEcCCCC
Confidence 432 45777788888 79999998887753
No 80
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.08 E-value=7.8e-10 Score=126.16 Aligned_cols=104 Identities=18% Similarity=0.169 Sum_probs=84.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~ 970 (1057)
..++.+|||+|||+|.+++.+|... ...+|+|+|+++.+++.+++|++.++++ +++++++|+.++.. ...||+|++|
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFFPEVDRILAN 279 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTCCCCSEEEEC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCccccCCCCEEEEC
Confidence 3578899999999999999999544 3457999999999999999999999998 89999999998764 3458999999
Q ss_pred CCCCCh-------------hHHHHHHHHhhCCCcEEEEEccc
Q 036185 971 LIPTSE-------------NSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 971 ~~P~~~-------------~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
| |... ..+..+.+.|+ +||.+++.+..
T Consensus 280 p-Pyg~r~~~~~~~~~~~~~~~~~~~~~Lk-pgG~l~i~t~~ 319 (354)
T 3tma_A 280 P-PHGLRLGRKEGLFHLYWDFLRGALALLP-PGGRVALLTLR 319 (354)
T ss_dssp C-CSCC----CHHHHHHHHHHHHHHHHTSC-TTCEEEEEESC
T ss_pred C-CCcCccCCcccHHHHHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 9 7642 23444555665 79998887664
No 81
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.07 E-value=9.6e-10 Score=119.12 Aligned_cols=105 Identities=17% Similarity=0.064 Sum_probs=91.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHc-CCCccEEEEeCCcccc-CCCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQAN-SVSDHCIVLEGDNRFT-APKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N-~~~~~v~~~~~D~~~~-~~~~~~D~Vil 969 (1057)
+.++++|||++||+|.+++.++...+ ..+|+++|+++.+++.+++|++.+ +. +++.++++|+.+. ++...||.|++
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV-ENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC-CCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC-CCEEEEECchhhcCCCCCCcCEEEE
Confidence 46889999999999999999985423 568999999999999999999998 84 4799999999987 55567999999
Q ss_pred CCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 970 GLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 970 ~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++ |.....+..+.++|+ +||++.++....
T Consensus 173 ~~-~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 201 (258)
T 2pwy_A 173 DL-MEPWKVLEKAALALK-PDRFLVAYLPNI 201 (258)
T ss_dssp ES-SCGGGGHHHHHHHEE-EEEEEEEEESCH
T ss_pred CC-cCHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 98 888888999999998 699999887654
No 82
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.07 E-value=2.1e-09 Score=109.10 Aligned_cols=108 Identities=15% Similarity=0.112 Sum_probs=84.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++ ..+ +|+|+|+++.+++. ..+++++++|+.+.++...||.|++|+ |
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~-~~~--~v~gvD~s~~~~~~----------~~~~~~~~~d~~~~~~~~~fD~i~~n~-~ 87 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLR-KRN--TVVSTDLNIRALES----------HRGGNLVRADLLCSINQESVDVVVFNP-P 87 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHT-TTS--EEEEEESCHHHHHT----------CSSSCEEECSTTTTBCGGGCSEEEECC-C
T ss_pred CCCCeEEEeccCccHHHHHHH-hcC--cEEEEECCHHHHhc----------ccCCeEEECChhhhcccCCCCEEEECC-C
Confidence 567899999999999999998 333 89999999999997 236889999998866667899999998 6
Q ss_pred CC--------------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 974 TS--------------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 974 ~~--------------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
.. ...+...++.+ +||++.+.+..... .+.+.+++++.|+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l--pgG~l~~~~~~~~~---------~~~l~~~l~~~gf~~ 143 (170)
T 3q87_B 88 YVPDTDDPIIGGGYLGREVIDRFVDAV--TVGMLYLLVIEANR---------PKEVLARLEERGYGT 143 (170)
T ss_dssp CBTTCCCTTTBCCGGGCHHHHHHHHHC--CSSEEEEEEEGGGC---------HHHHHHHHHHTTCEE
T ss_pred CccCCccccccCCcchHHHHHHHHhhC--CCCEEEEEEecCCC---------HHHHHHHHHHCCCcE
Confidence 54 34566777777 69999887765543 344566677788753
No 83
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.07 E-value=5e-10 Score=118.63 Aligned_cols=104 Identities=15% Similarity=0.108 Sum_probs=86.2
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc----CCCCCccEEEEC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT----APKGVANRVCLG 970 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~----~~~~~~D~Vil~ 970 (1057)
++.+|||++||+|.+++.+|.......|+|||+++.+++.+++|++.+++. ++.++++|+.++ ++...+|.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~ 112 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLF 112 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcCCCChheEEEe
Confidence 678999999999999999986555567999999999999999999999997 699999999886 456689999987
Q ss_pred C---CCCCh---------hHHHHHHHHhhCCCcEEEEEcccc
Q 036185 971 L---IPTSE---------NSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 971 ~---~P~~~---------~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. .|... .++..+.++|+ +||++++.+...
T Consensus 113 ~~~p~~~~~~~~rr~~~~~~l~~~~r~Lk-pGG~l~i~td~~ 153 (218)
T 3dxy_A 113 FPDPWHKARHNKRRIVQVPFAELVKSKLQ-LGGVFHMATDWE 153 (218)
T ss_dssp SCCCCCSGGGGGGSSCSHHHHHHHHHHEE-EEEEEEEEESCH
T ss_pred CCCCccchhhhhhhhhhHHHHHHHHHHcC-CCcEEEEEeCCH
Confidence 2 12221 36788888888 799999887643
No 84
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=1.2e-09 Score=116.33 Aligned_cols=99 Identities=11% Similarity=0.042 Sum_probs=80.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC----CCCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA----PKGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~----~~~~~D~V 967 (1057)
+.++++|||++||+|.+++.++...+ ..+|+++|+++.+++.+++|++.+ .+++++++|+.+.. ....||+|
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~D~v 147 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRALVPKVDVI 147 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTTCCCEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcccCCceEE
Confidence 45789999999999999999985534 368999999999999999999876 37999999998732 13479999
Q ss_pred EECCCCCCh---hHHHHHHHHhhCCCcEEEEE
Q 036185 968 CLGLIPTSE---NSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 968 il~~~P~~~---~~~~~a~~~l~~~gg~l~~~ 996 (1057)
++++ |... ..+..+.+.|+ +||++.+.
T Consensus 148 ~~~~-~~~~~~~~~l~~~~~~Lk-pgG~l~~~ 177 (227)
T 1g8a_A 148 FEDV-AQPTQAKILIDNAEVYLK-RGGYGMIA 177 (227)
T ss_dssp EECC-CSTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EECC-CCHhHHHHHHHHHHHhcC-CCCEEEEE
Confidence 9998 4432 23778888888 69998887
No 85
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.05 E-value=9.9e-10 Score=129.54 Aligned_cols=105 Identities=22% Similarity=0.260 Sum_probs=87.7
Q ss_pred CCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEECC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLGL 971 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~ 971 (1057)
+|++|||+|||+|++++++|...+ ..+|+|+|+++.+++.+++|++.+++. +++++++|+.++.. ...||+|++|+
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhhhccccCCEEEECC
Confidence 899999999999999999986543 458999999999999999999999997 69999999987642 45799999998
Q ss_pred CCCC---------------------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 972 IPTS---------------------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 972 ~P~~---------------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|.+ ...+..|.++|+ +||+|++.+|+-..
T Consensus 196 -PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~LvysTcs~~~ 251 (479)
T 2frx_A 196 -PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALR-PGGTLVYSTCTLNQ 251 (479)
T ss_dssp -CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCCSS
T ss_pred -CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcC-CCCEEEEecccCCc
Confidence 642 123666777887 79999999987543
No 86
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.04 E-value=1.1e-09 Score=118.19 Aligned_cols=103 Identities=18% Similarity=0.240 Sum_probs=83.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc--------CCCccEEEEeCCccccCC----
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN--------SVSDHCIVLEGDNRFTAP---- 960 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N--------~~~~~v~~~~~D~~~~~~---- 960 (1057)
..++.+|||++||+|.|++.+|.......|+|||+++.+++.+++|++.+ ++. ++.++++|+.+.++
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhcc
Confidence 35678999999999999999985433458999999999999999999988 776 79999999988543
Q ss_pred CCCccEEEECCCCCC-------------hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 961 KGVANRVCLGLIPTS-------------ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 961 ~~~~D~Vil~~~P~~-------------~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
...+|.|++.. |.. ...+..+.++|+ +||+|++.+.
T Consensus 126 ~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~Lk-pgG~l~~~td 174 (246)
T 2vdv_E 126 KGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYVLK-EGGVVYTITD 174 (246)
T ss_dssp TTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHHEE-EEEEEEEEES
T ss_pred ccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHHcC-CCCEEEEEec
Confidence 45688888765 333 367888888888 6999998653
No 87
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.04 E-value=2.4e-09 Score=123.00 Aligned_cols=123 Identities=8% Similarity=-0.004 Sum_probs=92.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVCL 969 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vil 969 (1057)
.++++|||++ |+|.+++.++. .++ .+|+++|++|.+++.+++|++.++++ +++++++|+.+.++ ...||+|++
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~-~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALML-SGLPKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHH-HTCCSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHH-hCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhccCCccEEEE
Confidence 3688999999 99999999984 454 68999999999999999999999997 89999999998544 247999999
Q ss_pred CCCCCCh----hHHHHHHHHhhCCCcEEEEEcccc-cchhHHHHHHHHHHHHHHHH-hcCCce
Q 036185 970 GLIPTSE----NSWVTAVQALRSEGGTLHVHGNVK-DSEEKLWAEHVSKSIYEIAR-SEGHRW 1026 (1057)
Q Consensus 970 ~~~P~~~----~~~~~a~~~l~~~gg~l~~~~~~~-~~~~~~~~~~~~~~i~~~~~-~~g~~~ 1026 (1057)
|| |... .++..+.++|+ +||.+.++++.. ..... ....+.+++. ..|+.+
T Consensus 248 ~~-p~~~~~~~~~l~~~~~~Lk-pgG~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~g~~~ 303 (373)
T 2qm3_A 248 DP-PETLEAIRAFVGRGIATLK-GPRCAGYFGITRRESSLD-----KWREIQKLLLNEFNVVI 303 (373)
T ss_dssp CC-CSSHHHHHHHHHHHHHTBC-STTCEEEEEECTTTCCHH-----HHHHHHHHHHHTSCCEE
T ss_pred CC-CCchHHHHHHHHHHHHHcc-cCCeEEEEEEecCcCCHH-----HHHHHHHHHHHhcCcch
Confidence 99 7653 45677777887 688544444444 22111 1233455555 677654
No 88
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.04 E-value=1.4e-09 Score=116.23 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=87.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vil 969 (1057)
..++.+|||++||+|++++.+|......+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ ...||.|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 35688999999999999999984224668999999999999999999999998789999999988765 568999999
Q ss_pred CCCCCC-hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 970 GLIPTS-ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 970 ~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+..+.. ...+..+.++|+ +||+|.+....
T Consensus 149 ~~~~~~~~~~l~~~~~~Lk-pgG~lv~d~~~ 178 (232)
T 3ntv_A 149 DAAKAQSKKFFEIYTPLLK-HQGLVITDNVL 178 (232)
T ss_dssp ETTSSSHHHHHHHHGGGEE-EEEEEEEECTT
T ss_pred cCcHHHHHHHHHHHHHhcC-CCeEEEEeeCC
Confidence 873333 455777777887 69999885543
No 89
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.04 E-value=1.1e-10 Score=122.50 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=50.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC-----CCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK-----GVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~-----~~~D~Vi 968 (1057)
.++.+|||++||+|.+++.++......+|+++|+++.+++.+++|+..+++ +++++++|+.+.++. ..||.|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 678899999999999999998554355899999999999999999999988 699999999886554 7899999
Q ss_pred ECCCCC
Q 036185 969 LGLIPT 974 (1057)
Q Consensus 969 l~~~P~ 974 (1057)
+|| |.
T Consensus 107 ~np-p~ 111 (215)
T 4dzr_A 107 SNP-PY 111 (215)
T ss_dssp ECC-CC
T ss_pred ECC-CC
Confidence 998 64
No 90
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.03 E-value=5.4e-10 Score=127.20 Aligned_cols=98 Identities=23% Similarity=0.266 Sum_probs=79.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.+|++|||++||+|.+++.|| ++||++|+|||.++ +++.|+++++.|++.++|+++++|+.++....++|+||..++-
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa-~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~ 159 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCA-QAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMG 159 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCB
T ss_pred cCCCEEEEeCCCccHHHHHHH-HhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeeccc
Confidence 478999999999999999887 68999999999997 7899999999999999999999999987656789999975533
Q ss_pred CC------hhHHHHHH-HHhhCCCcEEE
Q 036185 974 TS------ENSWVTAV-QALRSEGGTLH 994 (1057)
Q Consensus 974 ~~------~~~~~~a~-~~l~~~gg~l~ 994 (1057)
+. ...+..|. +.|+ +||+++
T Consensus 160 ~~l~~e~~l~~~l~a~~r~Lk-p~G~~i 186 (376)
T 4hc4_A 160 YGLLHESMLSSVLHARTKWLK-EGGLLL 186 (376)
T ss_dssp TTBTTTCSHHHHHHHHHHHEE-EEEEEE
T ss_pred ccccccchhhhHHHHHHhhCC-CCceEC
Confidence 22 23344555 4555 677644
No 91
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=2.1e-09 Score=116.25 Aligned_cols=106 Identities=13% Similarity=0.071 Sum_probs=88.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~V 967 (1057)
..++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ ...||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 35688999999999999999984433 568999999999999999999999998889999999988654 2379999
Q ss_pred EECCCCCC--hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLIPTS--ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~P~~--~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+++. +.. ...+..+.++|+ +||+|.+.....
T Consensus 141 ~~d~-~~~~~~~~l~~~~~~Lk-pGG~lv~~~~~~ 173 (248)
T 3tfw_A 141 FIDA-DKPNNPHYLRWALRYSR-PGTLIIGDNVVR 173 (248)
T ss_dssp EECS-CGGGHHHHHHHHHHTCC-TTCEEEEECCSG
T ss_pred EECC-chHHHHHHHHHHHHhcC-CCeEEEEeCCCc
Confidence 9987 432 456777888887 799999887754
No 92
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.02 E-value=2.7e-09 Score=118.77 Aligned_cols=106 Identities=8% Similarity=-0.063 Sum_probs=89.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
+.++.+|||++||+|.+++.+++..+ .+|+++|+++.+++.++++++.+++.+++.++.+|+.++ ...||+|++...
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~fD~v~~~~~ 146 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF--DEPVDRIVSLGA 146 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC--CCCCSEEEEESC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc--CCCccEEEEcch
Confidence 46789999999999999999985446 579999999999999999999999988899999999987 567999998632
Q ss_pred ----CCC---------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 973 ----PTS---------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 973 ----P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|.. ...+..+.++|+ +||++.++++....
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~ 188 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTP-DDGRMLLHTITIPD 188 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSC-TTCEEEEEEEECCC
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcC-CCcEEEEEEEeccC
Confidence 221 356777778887 79999999987654
No 93
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.02 E-value=2.1e-09 Score=113.89 Aligned_cols=107 Identities=12% Similarity=0.032 Sum_probs=88.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC------CCcc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK------GVAN 965 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~------~~~D 965 (1057)
..++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.++. ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 35688999999999999999984432 4589999999999999999999999987899999999876542 5699
Q ss_pred EEEECCCCCC-hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 966 RVCLGLIPTS-ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 966 ~Vil~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.|+++..... ...+..+.++|+ +||+|.++....
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L~-pgG~lv~~~~~~ 170 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLSR-PGTVIIGDNVVR 170 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCC-TTCEEEEESCSG
T ss_pred EEEEcCCcHHHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 9999983322 455777788887 799999887654
No 94
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=1.9e-09 Score=124.15 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=85.5
Q ss_pred EEeCCEEEEEecceeEeeCC---------CHHHH--HHHhhc--cCCCCEEEEecCcccHhHHHHHHhCCC---------
Q 036185 862 HCENGILYSFDATKCMFSWG---------NLSEK--LRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKA--------- 919 (1057)
Q Consensus 862 ~~e~gi~~~~d~~~~~f~~~---------~~~er--~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a--------- 919 (1057)
..++.+.+.+|.+...+..+ -..|. ..++.. ..++..|||+|||+|+|.+.+|.....
T Consensus 155 l~~~~~~~~ld~sg~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f 234 (393)
T 3k0b_A 155 ILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREF 234 (393)
T ss_dssp EETTEEEEEEESSSSCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCC
T ss_pred EECCEEEEEEecCCCcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccc
Confidence 45678889999763211111 11222 122222 356889999999999999999853221
Q ss_pred -----------------------------cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 920 -----------------------------RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 920 -----------------------------~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
.+|+|+|+|+.|++.+++|++.+++.+++.++++|+.+......||+|++|
T Consensus 235 ~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~N 314 (393)
T 3k0b_A 235 VSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVAN 314 (393)
T ss_dssp GGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEEC
T ss_pred hhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEEC
Confidence 359999999999999999999999987899999999998766689999999
Q ss_pred CCCCC
Q 036185 971 LIPTS 975 (1057)
Q Consensus 971 ~~P~~ 975 (1057)
| |+.
T Consensus 315 P-PYg 318 (393)
T 3k0b_A 315 P-PYG 318 (393)
T ss_dssp C-CCC
T ss_pred C-CCc
Confidence 9 864
No 95
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.01 E-value=3.2e-09 Score=111.76 Aligned_cols=101 Identities=18% Similarity=0.107 Sum_probs=78.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---CC-CCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---AP-KGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---~~-~~~~D~Vi 968 (1057)
+.+|.+|||++||+|.++..++...+..+|+|+|++|.+++.+.++++.. .++.++.+|+... .+ ...||.|+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~~~~fD~V~ 131 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYSGIVEKVDLIY 131 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhcccccceeEEE
Confidence 46789999999999999999885544458999999999998888877753 2688999998764 22 36799999
Q ss_pred ECCCCCChh--HHHHHHHHhhCCCcEEEEEc
Q 036185 969 LGLIPTSEN--SWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 969 l~~~P~~~~--~~~~a~~~l~~~gg~l~~~~ 997 (1057)
++....... .+..+.++|+ +||.+.+..
T Consensus 132 ~~~~~~~~~~~~l~~~~r~Lk-pgG~l~i~~ 161 (210)
T 1nt2_A 132 QDIAQKNQIEILKANAEFFLK-EKGEVVIMV 161 (210)
T ss_dssp ECCCSTTHHHHHHHHHHHHEE-EEEEEEEEE
T ss_pred EeccChhHHHHHHHHHHHHhC-CCCEEEEEE
Confidence 996332221 2677788888 699888873
No 96
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.01 E-value=2.1e-09 Score=115.74 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=91.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
+.++++|||++||+|.+++.+++. +.+|+++|+++.+++.+++|++.+++..++.++.+|+.+.. +...||.|++++
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 166 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV 166 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC
Confidence 357899999999999999999854 56899999999999999999999998668999999999876 556799999998
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|.....+..+.++|+ +||++.+.....
T Consensus 167 -~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 193 (248)
T 2yvl_A 167 -REPWHYLEKVHKSLM-EGAPVGFLLPTA 193 (248)
T ss_dssp -SCGGGGHHHHHHHBC-TTCEEEEEESSH
T ss_pred -cCHHHHHHHHHHHcC-CCCEEEEEeCCH
Confidence 877788999999998 699888877643
No 97
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.00 E-value=3.6e-09 Score=117.79 Aligned_cols=81 Identities=15% Similarity=0.129 Sum_probs=70.3
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC----CCccE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK----GVANR 966 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~----~~~D~ 966 (1057)
...+|++|||+|||.|+.++++|... +..+|+|+|+++.+++.+++|++.+++. +++++++|+.++... ..||+
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccccccCCCCE
Confidence 35789999999999999999998543 4568999999999999999999999996 799999999887542 46999
Q ss_pred EEECCCCC
Q 036185 967 VCLGLIPT 974 (1057)
Q Consensus 967 Vil~~~P~ 974 (1057)
|++|+ |-
T Consensus 178 Vl~D~-Pc 184 (309)
T 2b9e_A 178 ILLDP-SC 184 (309)
T ss_dssp EEECC-CC
T ss_pred EEEcC-Cc
Confidence 99998 64
No 98
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.99 E-value=7.8e-10 Score=117.37 Aligned_cols=107 Identities=13% Similarity=0.166 Sum_probs=89.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC-------CCc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK-------GVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~-------~~~ 964 (1057)
..++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.++. ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34678999999999999999984332 5689999999999999999999999987899999999877541 689
Q ss_pred cEEEECCCCC-ChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 965 NRVCLGLIPT-SENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 965 D~Vil~~~P~-~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|.|+++.... ....+..+.++|+ +||+|.++....
T Consensus 142 D~v~~~~~~~~~~~~l~~~~~~L~-pgG~lv~~~~~~ 177 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYEESLKLLR-EGGLIAVDNVLR 177 (225)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEE-EEEEEEEECSSG
T ss_pred cEEEECCCHHHHHHHHHHHHHhcC-CCcEEEEeCCCc
Confidence 9999998322 2456788888888 699999987653
No 99
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.99 E-value=3.1e-09 Score=122.11 Aligned_cols=113 Identities=14% Similarity=0.130 Sum_probs=85.6
Q ss_pred EEeCCEEEEEecce-----eEeeCC----CHHHH--HHHhhc--cCCCCEEEEecCcccHhHHHHHHhCCC---------
Q 036185 862 HCENGILYSFDATK-----CMFSWG----NLSEK--LRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKA--------- 919 (1057)
Q Consensus 862 ~~e~gi~~~~d~~~-----~~f~~~----~~~er--~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a--------- 919 (1057)
..++++.+.+|.+. ..+... ...|. ..++.. ..++..|||+|||+|+|++.+|.....
T Consensus 149 i~~~~~~~~lD~sG~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f 228 (385)
T 3ldu_A 149 IHKDKVTISIDTTGDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREF 228 (385)
T ss_dssp EETTEEEEEEESCCSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCC
T ss_pred EECCEEEEEEecCCChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCccccc
Confidence 45678899999762 111111 11222 122222 356889999999999999999854211
Q ss_pred -----------------------------cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 920 -----------------------------RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 920 -----------------------------~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
..|+|+|+++.|++.+++|++.|++.+++++.++|+.++.....+|+||+|
T Consensus 229 ~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~N 308 (385)
T 3ldu_A 229 ISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITN 308 (385)
T ss_dssp GGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEEC
T ss_pred chhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEEC
Confidence 359999999999999999999999988899999999998766689999999
Q ss_pred CCCCC
Q 036185 971 LIPTS 975 (1057)
Q Consensus 971 ~~P~~ 975 (1057)
| |+.
T Consensus 309 P-Pyg 312 (385)
T 3ldu_A 309 P-PYG 312 (385)
T ss_dssp C-CCC
T ss_pred C-CCc
Confidence 9 865
No 100
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.99 E-value=1.8e-09 Score=114.65 Aligned_cols=103 Identities=14% Similarity=0.039 Sum_probs=86.4
Q ss_pred CCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCC-ccEEEEeCCccccCC---CCCccEEEEC
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVS-DHCIVLEGDNRFTAP---KGVANRVCLG 970 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~-~~v~~~~~D~~~~~~---~~~~D~Vil~ 970 (1057)
+.+|||++||+|+.++.+|...+ ..+|+++|+++.+++.+++|++.+++. ++++++++|+.++++ ...||.|+++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 34999999999999999985432 467999999999999999999999998 799999999988764 4679999999
Q ss_pred CCCCC-hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 971 LIPTS-ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 971 ~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
..... ..++..+.++|+ +||+|.+....
T Consensus 137 ~~~~~~~~~l~~~~~~Lk-pGG~lv~dn~~ 165 (221)
T 3dr5_A 137 VSPMDLKALVDAAWPLLR-RGGALVLADAL 165 (221)
T ss_dssp CCTTTHHHHHHHHHHHEE-EEEEEEETTTT
T ss_pred CcHHHHHHHHHHHHHHcC-CCcEEEEeCCC
Confidence 73332 456888888888 69999986654
No 101
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.99 E-value=2.9e-09 Score=116.56 Aligned_cols=105 Identities=12% Similarity=0.022 Sum_probs=85.0
Q ss_pred hccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 891 RLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 891 ~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
..+.+|++|||++||+|+++..++++....+|+++|++|++++.|++|++..++ ++++++++|+.++. ...||+|+++
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-d~~FDvV~~~ 195 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-GLEFDVLMVA 195 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG-GCCCSEEEEC
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC-CCCcCEEEEC
Confidence 346889999999999998874433233344799999999999999999999999 68999999999864 5679999986
Q ss_pred CC-CCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 971 LI-PTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 971 ~~-P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.. |.....+....+.|+ +||.|.+-..
T Consensus 196 a~~~d~~~~l~el~r~Lk-PGG~Lvv~~~ 223 (298)
T 3fpf_A 196 ALAEPKRRVFRNIHRYVD-TETRIIYRTY 223 (298)
T ss_dssp TTCSCHHHHHHHHHHHCC-TTCEEEEEEC
T ss_pred CCccCHHHHHHHHHHHcC-CCcEEEEEcC
Confidence 53 333567888888888 7999988764
No 102
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.98 E-value=6.5e-09 Score=113.37 Aligned_cols=131 Identities=11% Similarity=0.022 Sum_probs=98.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
+.++.+|||++||+|.+++.++. .+..+|+++|+++.+++.++++++.+++.++++++++|+.++. +...||+|++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~-~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~ 122 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAG-HVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG 122 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHT-TCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCCCHHHHHHHh-ccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC
Confidence 35789999999999999999984 4555899999999999999999999999888999999998864 356799999876
Q ss_pred CCCC---hhHHHHHHHHhhCCCcEEEEEcccccc--hhHHHHHHH---------HHHHHHHHHhcCCc
Q 036185 972 IPTS---ENSWVTAVQALRSEGGTLHVHGNVKDS--EEKLWAEHV---------SKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P~~---~~~~~~a~~~l~~~gg~l~~~~~~~~~--~~~~~~~~~---------~~~i~~~~~~~g~~ 1025 (1057)
.-.. ...+..+.++|+ +||++.+.+..... ......... .+.+.+.+++.|+.
T Consensus 123 ~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 189 (267)
T 3kkz_A 123 AIYNIGFERGLNEWRKYLK-KGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYL 189 (267)
T ss_dssp CGGGTCHHHHHHHHGGGEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEE
T ss_pred CceecCHHHHHHHHHHHcC-CCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCE
Confidence 3222 345666667777 79999988764211 111111111 34677788888875
No 103
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.98 E-value=5e-09 Score=114.03 Aligned_cols=107 Identities=21% Similarity=0.172 Sum_probs=86.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC--CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK--ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~--a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
+++|.+|||++||+|.+++.+|+..+ ..+|+|+|++|.+++.|+++++..+...+|+++++|+.++.. ..+|.|+++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~-~~~d~v~~~ 146 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI-ENASMVVLN 146 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC-CSEEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc-cccccceee
Confidence 67899999999999999999985422 337999999999999999999998888789999999988643 469999987
Q ss_pred CCCCC------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 971 LIPTS------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 971 ~~P~~------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
..-+. ...+.++.++|+ +||++.+.+....
T Consensus 147 ~~l~~~~~~~~~~~l~~i~~~Lk-pGG~lii~e~~~~ 182 (261)
T 4gek_A 147 FTLQFLEPSERQALLDKIYQGLN-PGGALVLSEKFSF 182 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEBCC
T ss_pred eeeeecCchhHhHHHHHHHHHcC-CCcEEEEEeccCC
Confidence 42221 234777888888 7999998876543
No 104
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.97 E-value=8.9e-09 Score=111.47 Aligned_cols=80 Identities=14% Similarity=0.041 Sum_probs=67.7
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc----CCC---CCccEE
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT----APK---GVANRV 967 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~----~~~---~~~D~V 967 (1057)
++.+|||++||+|.+++.++.+....+|+|+|+++.+++.+++|++.|++.++++++++|+.+. ++. ..||.|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5779999999999999998854334679999999999999999999999987899999998762 222 479999
Q ss_pred EECCCCCC
Q 036185 968 CLGLIPTS 975 (1057)
Q Consensus 968 il~~~P~~ 975 (1057)
++|| |..
T Consensus 145 ~~np-p~~ 151 (254)
T 2h00_A 145 MCNP-PFF 151 (254)
T ss_dssp EECC-CCC
T ss_pred EECC-CCc
Confidence 9998 654
No 105
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.97 E-value=1.6e-09 Score=114.78 Aligned_cols=108 Identities=18% Similarity=0.199 Sum_probs=84.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--C-----CCcc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--K-----GVAN 965 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~-----~~~D 965 (1057)
.++.+|||++||+|++++.+|...+ ..+|+++|++|.+++.+++|++.+++.++++++++|+.+.++ . ..||
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD 136 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD 136 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceE
Confidence 4678999999999999999984322 458999999999999999999999998889999999977654 1 5799
Q ss_pred EEEECCCCCChhH---HHHHHHHhhCCCcEEEEEcccccc
Q 036185 966 RVCLGLIPTSENS---WVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 966 ~Vil~~~P~~~~~---~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+|+++........ +..++++|+ +||+|.++......
T Consensus 137 ~V~~d~~~~~~~~~~~~~~~~~~Lk-pgG~lv~~~~~~~~ 175 (221)
T 3u81_A 137 MVFLDHWKDRYLPDTLLLEKCGLLR-KGTVLLADNVIVPG 175 (221)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCCC-TTCEEEESCCCCCC
T ss_pred EEEEcCCcccchHHHHHHHhccccC-CCeEEEEeCCCCcc
Confidence 9999983333222 122225666 79999988776543
No 106
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.97 E-value=3.4e-09 Score=117.65 Aligned_cols=105 Identities=13% Similarity=0.146 Sum_probs=84.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH--cCC-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA--NSV-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~--N~~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
..+.+|||++||+|.+++.+++..+..+|++||++|.+++.+++|+.. +++ ..+++++.+|+.++++ ...||+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 456899999999999999998544567899999999999999999865 444 3489999999988764 45799999
Q ss_pred ECCCCCC----------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLIPTS----------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~P~~----------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+|+ |.. ..++..+.+.|+ +||++.+....+
T Consensus 169 ~d~-~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 208 (296)
T 1inl_A 169 IDS-TDPTAGQGGHLFTEEFYQACYDALK-EDGVFSAETEDP 208 (296)
T ss_dssp EEC-----------CCSHHHHHHHHHHEE-EEEEEEEECCCT
T ss_pred EcC-CCcccCchhhhhHHHHHHHHHHhcC-CCcEEEEEccCc
Confidence 987 433 566788888888 799999987654
No 107
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.97 E-value=1.4e-09 Score=113.66 Aligned_cols=103 Identities=10% Similarity=-0.010 Sum_probs=87.6
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPT 974 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~ 974 (1057)
++.+|||++||+|.+++.++...+..+|+++|+++.+++.+++|++.+++.+ +.++++|+.+..+...||.|+++.++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~~~D~i~~~~~~~ 143 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPSEPPFDGVISRAFAS 143 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCCCSCEEEEECSCSSS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCccCCcCEEEEeccCC
Confidence 4789999999999999999855456689999999999999999999999974 999999999877656899999987666
Q ss_pred ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 975 SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 975 ~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
....+..+.+.|+ +||++.+....
T Consensus 144 ~~~~l~~~~~~L~-~gG~l~~~~~~ 167 (207)
T 1jsx_A 144 LNDMVSWCHHLPG-EQGRFYALKGQ 167 (207)
T ss_dssp HHHHHHHHTTSEE-EEEEEEEEESS
T ss_pred HHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 5667777777787 69988887543
No 108
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.96 E-value=3.2e-10 Score=123.11 Aligned_cols=79 Identities=19% Similarity=0.143 Sum_probs=68.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCH-------HHHHHHHHHHHHcCCCccEEEEeCCccccCC---C--
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNP-------CAVEALKHNLQANSVSDHCIVLEGDNRFTAP---K-- 961 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~-------~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~-- 961 (1057)
.++.+|||++||+|.+++.+|. .++ +|+++|+|| ++++.+++|++.|++.++++++++|+.++++ .
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~-~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLAS-LGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHH-TTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHH-hCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 4578999999999999999984 454 699999999 9999999999999987679999999998754 2
Q ss_pred CCccEEEECCCCCC
Q 036185 962 GVANRVCLGLIPTS 975 (1057)
Q Consensus 962 ~~~D~Vil~~~P~~ 975 (1057)
..||+|++|| |..
T Consensus 160 ~~fD~V~~dP-~~~ 172 (258)
T 2r6z_A 160 GKPDIVYLDP-MYP 172 (258)
T ss_dssp CCCSEEEECC-CC-
T ss_pred CCccEEEECC-CCC
Confidence 5799999998 543
No 109
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.96 E-value=5.2e-09 Score=119.93 Aligned_cols=105 Identities=12% Similarity=0.083 Sum_probs=81.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC--------------------------------------cEEEEEecCHHHHHH
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA--------------------------------------RLVYACEWNPCAVEA 934 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a--------------------------------------~~V~avD~n~~ai~~ 934 (1057)
..+++.|+|+|||+|+|.+.+|..... .+|+|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 357889999999999999999843221 249999999999999
Q ss_pred HHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCCCh-----hH----HHHHHHHhh-CCCcEEEEEcc
Q 036185 935 LKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTSE-----NS----WVTAVQALR-SEGGTLHVHGN 998 (1057)
Q Consensus 935 ~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~~-----~~----~~~a~~~l~-~~gg~l~~~~~ 998 (1057)
+++|++.+++.++++++++|+.++.....||+|++|| |+.. .. .....+.|+ -+|+.+++.+-
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NP-PYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNP-PYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECC-CCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECC-chhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 9999999999888999999999987656899999999 8642 12 222223444 23777777655
No 110
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.95 E-value=7.3e-10 Score=119.85 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=83.0
Q ss_pred CCCEEEEecCcccHhHHHHHHh--CCCcEEEEEecCHHHHHHHHHHHHHc---CCCcc----------------------
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVR--AKARLVYACEWNPCAVEALKHNLQAN---SVSDH---------------------- 947 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~--~~a~~V~avD~n~~ai~~~~~N~~~N---~~~~~---------------------- 947 (1057)
++.+|||++||+|.+++.++.. ....+|+|+|+|+.+++.+++|+..+ ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999854 23567999999999999999999988 66433
Q ss_pred ---EE-------------EEeCCccccC------CCCCccEEEECCCCCCh--------------hHHHHHHHHhhCCCc
Q 036185 948 ---CI-------------VLEGDNRFTA------PKGVANRVCLGLIPTSE--------------NSWVTAVQALRSEGG 991 (1057)
Q Consensus 948 ---v~-------------~~~~D~~~~~------~~~~~D~Vil~~~P~~~--------------~~~~~a~~~l~~~gg 991 (1057)
+. ++++|+.+.. ....||+|++|| |... ..+..+.++|+ +||
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~np-p~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG 208 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDL-PYGERTHWEGQVPGQPVAGLLRSLASALP-AHA 208 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEEC-CGGGSSSSSSCCCHHHHHHHHHHHHHHSC-TTC
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCC-CeeccccccccccccHHHHHHHHHHHhcC-CCc
Confidence 67 9999998866 334799999998 5321 45677777887 799
Q ss_pred EEEEEcccc
Q 036185 992 TLHVHGNVK 1000 (1057)
Q Consensus 992 ~l~~~~~~~ 1000 (1057)
+|.+..+..
T Consensus 209 ~l~~~~~~~ 217 (250)
T 1o9g_A 209 VIAVTDRSR 217 (250)
T ss_dssp EEEEEESSS
T ss_pred EEEEeCcch
Confidence 999865543
No 111
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.94 E-value=1.3e-08 Score=110.11 Aligned_cols=131 Identities=15% Similarity=0.109 Sum_probs=97.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
+.++.+|||++||+|.+++.++...++ +|+++|+++.+++.+++|+..+++.++++++++|+.++. +...||+|+++.
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG 122 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC
Confidence 357889999999999999999854444 899999999999999999999999888999999997764 356899999864
Q ss_pred CCC---ChhHHHHHHHHhhCCCcEEEEEcccc--cchhHH----HHHH-----HHHHHHHHHHhcCCc
Q 036185 972 IPT---SENSWVTAVQALRSEGGTLHVHGNVK--DSEEKL----WAEH-----VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P~---~~~~~~~a~~~l~~~gg~l~~~~~~~--~~~~~~----~~~~-----~~~~i~~~~~~~g~~ 1025 (1057)
.-+ ....+..+.++|+ +||++.+.+... ...... |... ..+.+.+++++.|+.
T Consensus 123 ~l~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 189 (257)
T 3f4k_A 123 AIYNIGFERGMNEWSKYLK-KGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYT 189 (257)
T ss_dssp CSCCCCHHHHHHHHHTTEE-EEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEE
T ss_pred hHhhcCHHHHHHHHHHHcC-CCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCe
Confidence 222 2455777777777 799999887531 111111 1110 124667778888875
No 112
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.94 E-value=1e-08 Score=106.72 Aligned_cols=83 Identities=18% Similarity=0.128 Sum_probs=67.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++. .++.+|+++|+++.+++.+++|++ +++++++|+.++ + ..||.|++|| |
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~-~~~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~-~-~~~D~v~~~~-p 119 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYL-LGAESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEI-S-GKYDTWIMNP-P 119 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHH-TTBSEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGC-C-CCEEEEEECC-C
T ss_pred CCCCEEEEEeCCccHHHHHHHH-cCCCEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHC-C-CCeeEEEECC-C
Confidence 4788999999999999999984 467789999999999999999986 588999999985 3 5799999998 6
Q ss_pred CC-------hhHHHHHHHHh
Q 036185 974 TS-------ENSWVTAVQAL 986 (1057)
Q Consensus 974 ~~-------~~~~~~a~~~l 986 (1057)
.. ...+..+++.+
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 120 FGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp C-------CHHHHHHHHHHE
T ss_pred chhccCchhHHHHHHHHHhc
Confidence 32 23455555555
No 113
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.93 E-value=8e-09 Score=118.51 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=71.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.+|......+|+|+|+++.+++.+++|++.+++.++++++++|+.+... ...||+|++||
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 56788999999999999999984322237999999999999999999999997789999999998764 46799999999
Q ss_pred CCCC
Q 036185 972 IPTS 975 (1057)
Q Consensus 972 ~P~~ 975 (1057)
|..
T Consensus 295 -Pyg 297 (373)
T 3tm4_A 295 -PYG 297 (373)
T ss_dssp -CCC
T ss_pred -CCC
Confidence 744
No 114
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.92 E-value=3.8e-09 Score=114.08 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=86.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--------CCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--------KGV 963 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--------~~~ 963 (1057)
..++.+|||++||+|++++.+|.... ..+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ ...
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 35678999999999999999985433 457999999999999999999999998789999999987653 357
Q ss_pred ccEEEECCCCC-ChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 964 ANRVCLGLIPT-SENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 964 ~D~Vil~~~P~-~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
||.|+++.... ....+..+.++|+ +||+|.+...
T Consensus 157 fD~V~~d~~~~~~~~~l~~~~~~Lk-pGG~lv~d~~ 191 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHKRLIDLVK-VGGVIGYDNT 191 (247)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBC-TTCCEEEECT
T ss_pred EEEEEEcCchHHHHHHHHHHHHhCC-CCeEEEEecC
Confidence 99999987322 2556778888887 7999988653
No 115
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.92 E-value=2.2e-09 Score=119.64 Aligned_cols=108 Identities=11% Similarity=0.048 Sum_probs=88.3
Q ss_pred ccCCCCEEEEecCcccHhHHHHH-HhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFL-VRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a-~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
.+.++.+|||++||+|.+++.+| ......+|+++|+++.+++.+++|+..+++.++++++++|+.+......||.|+++
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSN 194 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECC
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEEC
Confidence 46789999999999999999885 23345589999999999999999999999988899999999987645789999986
Q ss_pred CCC----CChh---HHHHHHHHhhCCCcEEEEEcccc
Q 036185 971 LIP----TSEN---SWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 971 ~~P----~~~~---~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.+- .... .+..+.++|+ +||+|++.+...
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~ 230 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALK-PGGALVTSFLTP 230 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEECCCC
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEecCC
Confidence 521 2222 4777888888 799999988553
No 116
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.92 E-value=2.8e-09 Score=113.38 Aligned_cols=105 Identities=17% Similarity=0.119 Sum_probs=87.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----C---CCc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----K---GVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~---~~~ 964 (1057)
..++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.++ . ..|
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999984323 568999999999999999999999997789999999987653 1 679
Q ss_pred cEEEECCCCCC--hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 965 NRVCLGLIPTS--ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 965 D~Vil~~~P~~--~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|.|++++ +.. ...+..+.++|+ +||+|.++...
T Consensus 147 D~v~~d~-~~~~~~~~l~~~~~~L~-pgG~lv~~~~~ 181 (229)
T 2avd_A 147 DVAVVDA-DKENCSAYYERCLQLLR-PGGILAVLRVL 181 (229)
T ss_dssp EEEEECS-CSTTHHHHHHHHHHHEE-EEEEEEEECCS
T ss_pred cEEEECC-CHHHHHHHHHHHHHHcC-CCeEEEEECCC
Confidence 9999998 433 466888888888 79999997654
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.92 E-value=1.9e-09 Score=122.15 Aligned_cols=107 Identities=14% Similarity=0.135 Sum_probs=85.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHH-------HHcCCC-ccEEEEeCCccccCCC---
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNL-------QANSVS-DHCIVLEGDNRFTAPK--- 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~-------~~N~~~-~~v~~~~~D~~~~~~~--- 961 (1057)
+.++++||||+||+|.+++.+|...++.+|+|||+++.+++.+++|+ +.+++. ++|+++++|+.+....
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccccc
Confidence 57899999999999999999986678878999999999999999876 456763 5899999999875421
Q ss_pred CCccEEEECCCCCC----hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 962 GVANRVCLGLIPTS----ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 962 ~~~D~Vil~~~P~~----~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
..||+|++|+ +.+ ...+.+.++.|+ +||.|++++....
T Consensus 251 ~~aDVVf~Nn-~~F~pdl~~aL~Ei~RvLK-PGGrIVssE~f~p 292 (438)
T 3uwp_A 251 ANTSVIFVNN-FAFGPEVDHQLKERFANMK-EGGRIVSSKPFAP 292 (438)
T ss_dssp HTCSEEEECC-TTCCHHHHHHHHHHHTTSC-TTCEEEESSCSSC
T ss_pred CCccEEEEcc-cccCchHHHHHHHHHHcCC-CCcEEEEeecccC
Confidence 3589999997 433 333556666676 7999999877543
No 118
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.92 E-value=1.2e-08 Score=114.01 Aligned_cols=131 Identities=12% Similarity=0.053 Sum_probs=99.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
+.++.+|||++||+|.+++.++...+ .+|+++|+++.+++.+++|++.+++.++++++.+|+.+.. +...||+|++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~ 193 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG-SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE 193 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence 35789999999999999999984434 4699999999999999999999999888999999998864 356899998863
Q ss_pred CCC---ChhHHHHHHHHhhCCCcEEEEEcccccchh---HHH---HHH-------HHHHHHHHHHhcCCc
Q 036185 972 IPT---SENSWVTAVQALRSEGGTLHVHGNVKDSEE---KLW---AEH-------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P~---~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~---~~~---~~~-------~~~~i~~~~~~~g~~ 1025 (1057)
.-. ....+..+.++|+ +||+|.+.+....... ..+ ... ..+.+.+++++.|+.
T Consensus 194 ~l~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~ 262 (312)
T 3vc1_A 194 STMYVDLHDLFSEHSRFLK-VGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLV 262 (312)
T ss_dssp CGGGSCHHHHHHHHHHHEE-EEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEE
T ss_pred chhhCCHHHHHHHHHHHcC-CCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCE
Confidence 211 3566777888888 7999998876554311 111 111 125677888888875
No 119
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.92 E-value=5.9e-09 Score=110.93 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=75.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~V 967 (1057)
+.+|++|||++||+|+++..+|...+ ..+|+|+|++|.+++.+.+.++.. .|+.++.+|+..... ...||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYKSVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTTTTCCCEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhhccccceEEE
Confidence 46899999999999999999985433 458999999999997777766654 379999999976421 3579999
Q ss_pred EECCCCCC-hhHHHHHHH-HhhCCCcEEEEE
Q 036185 968 CLGLIPTS-ENSWVTAVQ-ALRSEGGTLHVH 996 (1057)
Q Consensus 968 il~~~P~~-~~~~~~a~~-~l~~~gg~l~~~ 996 (1057)
++|..+.. ...+...++ .|+ +||.|.+.
T Consensus 151 ~~d~a~~~~~~il~~~~~~~Lk-pGG~lvis 180 (232)
T 3id6_C 151 YVDIAQPDQTDIAIYNAKFFLK-VNGDMLLV 180 (232)
T ss_dssp EECCCCTTHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EecCCChhHHHHHHHHHHHhCC-CCeEEEEE
Confidence 99973322 223444444 777 79988876
No 120
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.91 E-value=7.1e-09 Score=113.88 Aligned_cols=106 Identities=20% Similarity=0.186 Sum_probs=90.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHc-C-CCccEEEEeCCccccC-CCCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQAN-S-VSDHCIVLEGDNRFTA-PKGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N-~-~~~~v~~~~~D~~~~~-~~~~~D~Vi 968 (1057)
+.++.+|||++||+|.+++.++...+ ..+|+++|+++.+++.+++|++.+ + +.+++.++++|+.+.. +...||.|+
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~ 176 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAV 176 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEE
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEE
Confidence 46789999999999999999985433 568999999999999999999988 5 4458999999998864 355799999
Q ss_pred ECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+++ |.....+..+.++|+ +||+|+++....
T Consensus 177 ~~~-~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 206 (280)
T 1i9g_A 177 LDM-LAPWEVLDAVSRLLV-AGGVLMVYVATV 206 (280)
T ss_dssp EES-SCGGGGHHHHHHHEE-EEEEEEEEESSH
T ss_pred ECC-cCHHHHHHHHHHhCC-CCCEEEEEeCCH
Confidence 998 877888999999998 699999987654
No 121
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.91 E-value=7.4e-10 Score=119.32 Aligned_cols=106 Identities=12% Similarity=0.082 Sum_probs=88.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-------CCCc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-------KGVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-------~~~~ 964 (1057)
..++.+|||++||+|+.++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ ...|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 35678999999999999999985433 457999999999999999999999998899999999988764 2679
Q ss_pred cEEEECCCCCC-hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 965 NRVCLGLIPTS-ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 965 D~Vil~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|.|+++..... ...+..+.++|+ +||+|.+....
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~Lk-pGG~lv~d~~~ 172 (242)
T 3r3h_A 138 DFIFIDADKTNYLNYYELALKLVT-PKGLIAIDNIF 172 (242)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHEE-EEEEEEEECSS
T ss_pred eEEEEcCChHHhHHHHHHHHHhcC-CCeEEEEECCc
Confidence 99999973222 345778888888 79999987654
No 122
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.91 E-value=8.4e-09 Score=121.31 Aligned_cols=107 Identities=21% Similarity=0.198 Sum_probs=88.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vi 968 (1057)
..+|++|||++||.|.+++.++...+. .+|+|+|+++.+++.+++|++.+++. ++.++++|+.+... ...||+|+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcchhhccCCCCEEE
Confidence 578899999999999999999865443 68999999999999999999999997 69999999988753 25799999
Q ss_pred ECCCCCC---------------------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 969 LGLIPTS---------------------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 969 l~~~P~~---------------------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+|+ |-+ ...+..+.+.|+ +||+|.+.+|+-..
T Consensus 336 ~D~-Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lk-pGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 336 LDA-PCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVK-PGGRLLYTTCSIFK 394 (450)
T ss_dssp EEC-CCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEE-EEEEEEEEESCCCG
T ss_pred EcC-CCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEeCCCCh
Confidence 998 542 123555666676 79999999887654
No 123
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.90 E-value=9.6e-09 Score=116.21 Aligned_cols=105 Identities=15% Similarity=0.074 Sum_probs=86.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHH-------cCC---CccEEEEeCCccccC--
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQA-------NSV---SDHCIVLEGDNRFTA-- 959 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~-------N~~---~~~v~~~~~D~~~~~-- 959 (1057)
+.+|.+|||++||+|++++.++...++ .+|+++|++|.+++.+++|++. |++ .++++++.+|+.+.+
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 578999999999999999999854354 6899999999999999999984 554 257999999998864
Q ss_pred -CCCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 960 -PKGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 960 -~~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+...||+|++++ |.....+..+.++|+ +||+|.++...
T Consensus 183 ~~~~~fD~V~~~~-~~~~~~l~~~~~~Lk-pgG~lv~~~~~ 221 (336)
T 2b25_A 183 IKSLTFDAVALDM-LNPHVTLPVFYPHLK-HGGVCAVYVVN 221 (336)
T ss_dssp -----EEEEEECS-SSTTTTHHHHGGGEE-EEEEEEEEESS
T ss_pred cCCCCeeEEEECC-CCHHHHHHHHHHhcC-CCcEEEEEeCC
Confidence 245699999998 777778888899998 69999877654
No 124
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.90 E-value=1.6e-08 Score=111.53 Aligned_cols=106 Identities=10% Similarity=-0.005 Sum_probs=88.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.+++.+++..++ +|+++|+++.+++.++++++..++.+++.++.+|+.++. ..||+|++...
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~~fD~v~~~~~ 138 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--EPVDRIVSIGA 138 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC--CCCSEEEEESC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC--CCeeEEEEeCc
Confidence 357889999999999999999855565 799999999999999999999998778999999998764 67999997631
Q ss_pred ------CCChhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 973 ------PTSENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 973 ------P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+.....+..+.++|+ +||++.+++.....
T Consensus 139 l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 139 FEHFGHERYDAFFSLAHRLLP-ADGVMLLHTITGLH 173 (287)
T ss_dssp GGGTCTTTHHHHHHHHHHHSC-TTCEEEEEEEEECC
T ss_pred hhhcChHHHHHHHHHHHHhcC-CCCEEEEEEecCCC
Confidence 223566788888887 79999998887643
No 125
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.90 E-value=9.3e-09 Score=114.41 Aligned_cols=145 Identities=14% Similarity=0.084 Sum_probs=100.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH--cCC-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA--NSV-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~--N~~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
.++.+|||++||+|.+++.+++..+..+|++||+++.+++.+++|+.. +++ ..+++++.+|+.++++ ...||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 467899999999999999998443457899999999999999999876 455 3589999999988653 45799999
Q ss_pred ECCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEee
Q 036185 969 LGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWY 1039 (1057)
Q Consensus 969 l~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~ 1039 (1057)
+|+ |.. ..++..+.++|+ +||+|.+.....-.. .+..+.+.+.+++.--.+++ ....|-.|
T Consensus 174 ~d~-~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~~-----~~~~~~~~~~l~~~f~~v~~---~~~~vP~~ 243 (304)
T 2o07_A 174 TDS-SDPMGPAESLFKESYYQLMKTALK-EDGVLCCQGECQWLH-----LDLIKEMRQFCQSLFPVVAY---AYCTIPTY 243 (304)
T ss_dssp EEC-C-----------CHHHHHHHHHEE-EEEEEEEEEECTTTC-----HHHHHHHHHHHHHHCSEEEE---EEEECTTS
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHhccC-CCeEEEEecCCcccc-----hHHHHHHHHHHHHhCCCcee---EEEEeccc
Confidence 997 542 356888888888 799998876443221 11233444444433222221 12335566
Q ss_pred cCCceEEEE
Q 036185 1040 APHIRHLVA 1048 (1057)
Q Consensus 1040 aP~~~h~~~ 1048 (1057)
.++.|.+++
T Consensus 244 ~~g~~g~~~ 252 (304)
T 2o07_A 244 PSGQIGFML 252 (304)
T ss_dssp GGGEEEEEE
T ss_pred cCcceEEEE
Confidence 667666654
No 126
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.90 E-value=8.3e-09 Score=108.78 Aligned_cols=132 Identities=8% Similarity=-0.011 Sum_probs=95.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc----cEEEEeCCccccCC-CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD----HCIVLEGDNRFTAP-KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~----~v~~~~~D~~~~~~-~~~~D~Vi 968 (1057)
.++.+|||++||+|.++..++...+..+|+++|+++.+++.+++|++.+++.+ ++.++++|+..... ...||.|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 56889999999999999999843344689999999999999999999999874 79999999864432 35799999
Q ss_pred ECCCCC----C--hhHHHHHHHHhhCCCcEEEEEcccccchhH------H----------HHHHHHHHHHHHHHhcCCce
Q 036185 969 LGLIPT----S--ENSWVTAVQALRSEGGTLHVHGNVKDSEEK------L----------WAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 969 l~~~P~----~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~------~----------~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
+...-. . ...+..+.++|+ +||++.+..+....... . -.+++.+.+.+++++.|+.+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v 186 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQ-PKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV 186 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcC-CCEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE
Confidence 864221 1 345666677777 68988877664321100 0 11334445558888888754
No 127
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.90 E-value=3.2e-09 Score=113.83 Aligned_cols=130 Identities=17% Similarity=0.102 Sum_probs=95.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil 969 (1057)
..+|.+|||++||+|.++..++ +.+..+|++||++|.+++.|+++++.++. ++.++.+|+.+.+ +...||.|+.
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~-~~~~~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQ-EAPIDEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHT-TSCEEEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHH-HhCCcEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccccccCCceEEE
Confidence 4678999999999999999987 44556899999999999999999988875 5889999988765 3567999999
Q ss_pred CCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccccchh-----HHHHHHHHHHHHHHHHhcCCce
Q 036185 970 GLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVKDSEE-----KLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 970 ~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
|..+.. ...+.++.++|+ +||++.++......+. ........+.....+.+.|++.
T Consensus 135 D~~~~~~~~~~~~~~~~~~~e~~rvLk-PGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~ 204 (236)
T 3orh_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCG
T ss_pred eeeecccchhhhcchhhhhhhhhheeC-CCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeE
Confidence 876543 244777888998 7999988754321110 0011222334445556678763
No 128
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=4.1e-09 Score=115.70 Aligned_cols=105 Identities=12% Similarity=0.115 Sum_probs=86.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH--cCC-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA--NSV-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~--N~~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
.++.+|||++||.|.++..+++..++.+|++||++|.+++.+++|+.. +++ ..+++++.+|++++++ ...||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 457899999999999999998544678999999999999999999854 344 3589999999998764 45799999
Q ss_pred ECCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+|+ |.. ..++..+.+.|+ +||++.+....+
T Consensus 154 ~d~-~~~~~~~~~l~~~~~~~~~~~~L~-pgG~lv~~~~~~ 192 (275)
T 1iy9_A 154 VDS-TEPVGPAVNLFTKGFYAGIAKALK-EDGIFVAQTDNP 192 (275)
T ss_dssp ESC-SSCCSCCCCCSTTHHHHHHHHHEE-EEEEEEEECCCT
T ss_pred ECC-CCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcCCc
Confidence 998 542 567888888998 799999986543
No 129
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.89 E-value=2.9e-08 Score=104.57 Aligned_cols=131 Identities=12% Similarity=0.089 Sum_probs=99.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~ 970 (1057)
..++.+|||++||+|.++..++... ...+|+++|+++.+++.+++++..+++. ++.++.+|+.+.. +...||+|+++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCCCCCeeEEEee
Confidence 4678899999999999999998543 2358999999999999999999999987 7999999998764 35679999986
Q ss_pred CC----CCChhHHHHHHHHhhCCCcEEEEEcccccchhHH---HHHHHHHHHHHHHHhcCCc
Q 036185 971 LI----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKL---WAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 971 ~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~---~~~~~~~~i~~~~~~~g~~ 1025 (1057)
.. +.....+..+.++|+ +||++.+.++........ ....-.+.+.+.+++.|+.
T Consensus 114 ~~l~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 174 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAK-PFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIR 174 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEE-EEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCE
T ss_pred hhhhhcCCHHHHHHHHHHHhC-CCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCE
Confidence 42 233566888888888 699999987654321000 0000134677778888875
No 130
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.89 E-value=2.5e-08 Score=104.54 Aligned_cols=127 Identities=14% Similarity=0.219 Sum_probs=96.9
Q ss_pred CEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECCC---
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGLI--- 972 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~~--- 972 (1057)
.+|||++||+|.++..++.. ...+|+++|+++.+++.++++++.+++.+++.++++|+.+.. +...||+|+++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 123 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFF 123 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGG
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhh
Confidence 39999999999999999854 445799999999999999999999999878999999998854 3567999999753
Q ss_pred -CCChhHHHHHHHHhhCCCcEEEEEcccccchhHH------------HHH--------HHHHHHHHHHHhcCCc
Q 036185 973 -PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKL------------WAE--------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 -P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~------------~~~--------~~~~~i~~~~~~~g~~ 1025 (1057)
+.....+..+.++|+ +||++.+.+......... |.. ...+.+.+++++.|+.
T Consensus 124 ~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 196 (219)
T 3dlc_A 124 WEDVATAFREIYRILK-SGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGIS 196 (219)
T ss_dssp CSCHHHHHHHHHHHEE-EEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCS
T ss_pred ccCHHHHHHHHHHhCC-CCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCC
Confidence 233566888888888 699988876443221110 100 1125778888899986
No 131
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.89 E-value=5.9e-09 Score=111.85 Aligned_cols=105 Identities=11% Similarity=0.076 Sum_probs=87.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--------CCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--------KGV 963 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--------~~~ 963 (1057)
..++.+|||++||+|+.++.+|.... ..+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ ...
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 35678999999999999999985533 468999999999999999999999998789999999987653 357
Q ss_pred ccEEEECCCCCC-hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 964 ANRVCLGLIPTS-ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 964 ~D~Vil~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
||.|+++..+.. ...+..+.++|+ +||+|++...
T Consensus 148 fD~I~~d~~~~~~~~~l~~~~~~L~-pGG~lv~d~~ 182 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHERLMKLVK-VGGIVAYDNT 182 (237)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEE-EEEEEEEECT
T ss_pred cCEEEECCchHHHHHHHHHHHHhcC-CCeEEEEecC
Confidence 999999973222 455777888888 7999988764
No 132
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.88 E-value=1.1e-08 Score=107.86 Aligned_cols=132 Identities=9% Similarity=0.034 Sum_probs=95.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc----cEEEEeCCccccCC-CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD----HCIVLEGDNRFTAP-KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~----~v~~~~~D~~~~~~-~~~~D~Vi 968 (1057)
.++.+|||++||+|.++..++......+|+++|+++.+++.+++++..+++.+ +++++++|+..... ...||.|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 56889999999999999999843333689999999999999999999988865 79999999965432 45799999
Q ss_pred ECCC----CCC--hhHHHHHHHHhhCCCcEEEEEcccccchhH------H----------HHHHHHHHHHHHHHhcCCce
Q 036185 969 LGLI----PTS--ENSWVTAVQALRSEGGTLHVHGNVKDSEEK------L----------WAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 969 l~~~----P~~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~------~----------~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
+... +.. ...+..+.++|+ +||++....+....... . -.+++.+.+.+++++.|+.+
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTR-PQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC-CSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhC-CCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 7542 211 355666777777 68987776665331000 0 12344555668888888754
No 133
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.88 E-value=3.6e-09 Score=121.55 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=84.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.+++.++ +.|+++|+|+|++ .+++.++++++.|++.++++++++|+.++....+||+|+++++
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la-~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~ 138 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSA-QAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWM 138 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHH-HTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCC
T ss_pred cCCCCEEEEeccCcCHHHHHHH-hcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcCh
Confidence 3578999999999999999998 4678799999999 9999999999999998889999999998765578999999875
Q ss_pred CCCh-------hHHHHHHHHhhCCCcEEEEEcc
Q 036185 973 PTSE-------NSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 973 P~~~-------~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
++.. ..+....+.|+ +||++.+...
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~Lk-pgG~li~~~~ 170 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLK-PTGVMYPSHA 170 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEE-EEEEEESSEE
T ss_pred hhcccchHHHHHHHHHHHhhCC-CCeEEEEecC
Confidence 5542 23444447777 7998866544
No 134
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.88 E-value=7.4e-09 Score=110.83 Aligned_cols=130 Identities=16% Similarity=0.093 Sum_probs=93.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---CCCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---APKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---~~~~~~D~Vil 969 (1057)
..++.+|||++||+|.+++.++ ..+..+|+++|+++.+++.++++++.++ .++.++++|+.+. ++...||.|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQ-EAPIDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHH-TSCEEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHH-hcCCCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 4678899999999999999987 4456689999999999999999998877 3799999999887 33568999999
Q ss_pred CCCC----CCh-----hHHHHHHHHhhCCCcEEEEEcccccchh-----HHHHHHHHHHHHHHHHhcCCce
Q 036185 970 GLIP----TSE-----NSWVTAVQALRSEGGTLHVHGNVKDSEE-----KLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 970 ~~~P----~~~-----~~~~~a~~~l~~~gg~l~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
+..+ ... ..+..+.++|+ +||++.+.+....... ..+...+.+.....+.+.|+..
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLK-PGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEE-EEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcC-CCeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 3212 111 33677788888 7999988776542110 0011122233445567788763
No 135
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.87 E-value=3.1e-09 Score=111.61 Aligned_cols=104 Identities=14% Similarity=0.074 Sum_probs=85.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~ 970 (1057)
.++.+|||++||+|++++.++.... ..+|+++|+++.+++.+++|++.+++.++++++++|+.+.++ .. ||.|+++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 4678999999999999999984433 458999999999999999999999998789999999987654 34 9999998
Q ss_pred CCCC-ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 971 LIPT-SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 971 ~~P~-~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
.... ....+..+.++|+ +||+|.++...
T Consensus 134 ~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~ 162 (210)
T 3c3p_A 134 CDVFNGADVLERMNRCLA-KNALLIAVNAL 162 (210)
T ss_dssp TTTSCHHHHHHHHGGGEE-EEEEEEEESSS
T ss_pred CChhhhHHHHHHHHHhcC-CCeEEEEECcc
Confidence 6222 2455777777887 69999987653
No 136
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.87 E-value=4.7e-09 Score=112.10 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=87.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~Vi 968 (1057)
..++.+|||++||+|++++.+|...+..+|+++|+++.+++.+++|++.+++.+++.++.+|+.+.++ ...||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 35788999999999999999985544568999999999999999999999997789999999988643 35799999
Q ss_pred ECCCCCC-hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 969 LGLIPTS-ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 969 l~~~P~~-~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
++..... ...+..+.++|+ +||+|++..+.
T Consensus 132 ~~~~~~~~~~~l~~~~~~L~-pgG~lv~~~~~ 162 (233)
T 2gpy_A 132 IDAAKGQYRRFFDMYSPMVR-PGGLILSDNVL 162 (233)
T ss_dssp EEGGGSCHHHHHHHHGGGEE-EEEEEEEETTT
T ss_pred ECCCHHHHHHHHHHHHHHcC-CCeEEEEEcCC
Confidence 9873222 456777777787 79999987553
No 137
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.87 E-value=2.3e-09 Score=115.08 Aligned_cols=99 Identities=21% Similarity=0.244 Sum_probs=79.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++. .+ .+|+|+|+++.+++.+++|++.+++.++++++++|+.+..+...||+|++++ |
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~-~ 153 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFAL-TG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSP-P 153 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECC-C
T ss_pred cCCCEEEECccccCHHHHHHHH-cC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECC-C
Confidence 4789999999999999999983 44 6799999999999999999999999668999999999887667899999998 5
Q ss_pred CChhH-----HHHHHHHhhCCCcEEEEE
Q 036185 974 TSENS-----WVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 974 ~~~~~-----~~~a~~~l~~~gg~l~~~ 996 (1057)
..... +....++|+ +||++++.
T Consensus 154 ~~~~~~~~~~~~~~~~~L~-pgG~~i~~ 180 (241)
T 3gdh_A 154 WGGPDYATAETFDIRTMMS-PDGFEIFR 180 (241)
T ss_dssp CSSGGGGGSSSBCTTTSCS-SCHHHHHH
T ss_pred cCCcchhhhHHHHHHhhcC-CcceeHHH
Confidence 43211 222344555 67764443
No 138
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.86 E-value=8.9e-09 Score=111.33 Aligned_cols=131 Identities=11% Similarity=-0.001 Sum_probs=98.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.+++.++...+ .+|+++|+++.+++.++++++.+++.+++.++++|+.+......||+|++...
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~ 112 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGA 112 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC-CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESC
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC-CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCC
Confidence 46789999999999999999985444 46999999999999999999999998789999999988765567999997432
Q ss_pred ----CCChhHHHHHHHHhhCCCcEEEEEcccccch--hHHHHHH----------HHHHHHHHHHhcCCc
Q 036185 973 ----PTSENSWVTAVQALRSEGGTLHVHGNVKDSE--EKLWAEH----------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 ----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~--~~~~~~~----------~~~~i~~~~~~~g~~ 1025 (1057)
|.....+..+.++|+ +||+|.+.+...... ...+... ..+.+.+++++.|+.
T Consensus 113 ~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 180 (256)
T 1nkv_A 113 TWIAGGFAGAEELLAQSLK-PGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYD 180 (256)
T ss_dssp GGGTSSSHHHHHHHTTSEE-EEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBC
T ss_pred hHhcCCHHHHHHHHHHHcC-CCeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCe
Confidence 344666888888888 699988876432111 0111000 124667778888875
No 139
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.86 E-value=9e-09 Score=113.86 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=83.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcC---C-CccEEEEeCCccccCC--CCCccEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANS---V-SDHCIVLEGDNRFTAP--KGVANRV 967 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~---~-~~~v~~~~~D~~~~~~--~~~~D~V 967 (1057)
.+..+|||++||.|.++..+++..+..+|++||+++.+++.+++|+...+ + +.+++++.+|+++++. ...||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 45789999999999999999854457789999999999999999987652 2 2379999999999875 4579999
Q ss_pred EECCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++|+ |.. ..++..+.++|+ +||++.+...++
T Consensus 162 i~D~-~~p~~~~~~l~~~~f~~~~~~~Lk-pgG~lv~~~~s~ 201 (294)
T 3adn_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNGVC 201 (294)
T ss_dssp EECC-----------CCHHHHHHHHHTEE-EEEEEEEEEEEC
T ss_pred EECC-CCccCcchhccHHHHHHHHHHhcC-CCCEEEEecCCc
Confidence 9987 432 556778888888 799999887554
No 140
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.86 E-value=8.9e-09 Score=110.29 Aligned_cols=103 Identities=15% Similarity=0.159 Sum_probs=81.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH------cCCCccEEEEeCCccccC----CCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA------NSVSDHCIVLEGDNRFTA----PKGV 963 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~------N~~~~~v~~~~~D~~~~~----~~~~ 963 (1057)
.++.+|||++||+|.+++.+|.......|+|+|+++.+++.+++|++. +++. ++.++++|+.+.+ +...
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTTTCHHHHCCTTC
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHHHhhhhhCCCcC
Confidence 456789999999999999998554456899999999999999999875 4565 7999999998743 3567
Q ss_pred ccEEEECCCCCC-------------hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 964 ANRVCLGLIPTS-------------ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 964 ~D~Vil~~~P~~-------------~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+|.|+++. |.. ...+..+.++|+ +||+|++.+..
T Consensus 124 ~D~v~~~~-~dp~~k~~h~krr~~~~~~l~~~~~~Lk-pGG~l~~~td~ 170 (235)
T 3ckk_A 124 LTKMFFLF-PDPHFKRTKHKWRIISPTLLAEYAYVLR-VGGLVYTITDV 170 (235)
T ss_dssp EEEEEEES-CC-----------CCCHHHHHHHHHHEE-EEEEEEEEESC
T ss_pred eeEEEEeC-CCchhhhhhhhhhhhhHHHHHHHHHHCC-CCCEEEEEeCC
Confidence 99998875 322 256778888888 79999887654
No 141
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.85 E-value=9.2e-09 Score=120.30 Aligned_cols=106 Identities=24% Similarity=0.224 Sum_probs=87.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil 969 (1057)
..+|++|||++||.|.+++.++...+..+|+|+|+++.+++.+++|++.+++. +.++++|+.+.. +...||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhhchhhcccCCCCEEEE
Confidence 56889999999999999999986544468999999999999999999999984 789999998764 2457999999
Q ss_pred CCCCCCh---------------------------hHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 970 GLIPTSE---------------------------NSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 970 ~~~P~~~---------------------------~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|+ |.+. ..+..+.+.|+ +||+|++.+|+-..
T Consensus 322 D~-Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lk-pGG~lvystcs~~~ 379 (429)
T 1sqg_A 322 DA-PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLK-TGGTLVYATCSVLP 379 (429)
T ss_dssp EC-CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEE-EEEEEEEEESCCCG
T ss_pred eC-CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEEECCCCh
Confidence 98 6431 33556666676 79999999987644
No 142
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.85 E-value=7.6e-09 Score=116.05 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=84.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH--cCC-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA--NSV-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~--N~~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
.++.+|||++||+|.+++.+++..+..+|+++|++|.+++.+++|+.. +++ ..+++++.+|+.++++ ...||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 467899999999999999998544567899999999999999999876 445 3479999999988653 45799999
Q ss_pred ECCC-CC-------ChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLI-PT-------SENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~-P~-------~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+|+. |. ...++..+.+.|+ +||++.+.....
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 233 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCESL 233 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEE-EEEEEEEEECCT
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcCCc
Confidence 9873 11 1466777888888 799999875543
No 143
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.85 E-value=1.5e-08 Score=111.53 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=86.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC--CCCCccEEEECC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA--PKGVANRVCLGL 971 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~--~~~~~D~Vil~~ 971 (1057)
.++.+|||++||+|.+++.++. .++ +|+++|+++.+++.++++++.+++..++.++++|+.+.. ....||+|++..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 144 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAE-RGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHA 144 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEES
T ss_pred CCCCEEEEeCCcchHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECc
Confidence 4577999999999999999984 444 799999999999999999999999778999999999876 456899999864
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. |.....+..+.++|+ +||++.+.....
T Consensus 145 ~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 176 (285)
T 4htf_A 145 VLEWVADPRSVLQTLWSVLR-PGGVLSLMFYNA 176 (285)
T ss_dssp CGGGCSCHHHHHHHHHHTEE-EEEEEEEEEEBH
T ss_pred hhhcccCHHHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 2 344567888888888 799998887654
No 144
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.85 E-value=1e-08 Score=116.07 Aligned_cols=99 Identities=15% Similarity=0.171 Sum_probs=81.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++ +.++.+|+|+|+++ +++.+++|++.|++.++++++++|+.++.. ..+||+|+.++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la-~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAA-KAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEW 139 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHH-HTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECC
T ss_pred hcCCCEEEEeeccCcHHHHHHH-HcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcC
Confidence 4678899999999999999998 45777899999997 999999999999997789999999988643 46899999887
Q ss_pred CCCC-------hhHHHHHHHHhhCCCcEEE
Q 036185 972 IPTS-------ENSWVTAVQALRSEGGTLH 994 (1057)
Q Consensus 972 ~P~~-------~~~~~~a~~~l~~~gg~l~ 994 (1057)
+++. ...+..+.++|+ +||++.
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 168 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLA-KGGSVY 168 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEE-EEEEEE
T ss_pred chhhccCHHHHHHHHHHHHhhcC-CCcEEE
Confidence 4433 223445556777 699886
No 145
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.85 E-value=2.3e-08 Score=104.83 Aligned_cols=151 Identities=14% Similarity=-0.045 Sum_probs=102.0
Q ss_pred HHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccE
Q 036185 887 LRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANR 966 (1057)
Q Consensus 887 ~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~ 966 (1057)
.+++..+.++.+|||++||+|.++..++. .++ +|+++|+++.+++.+++++ ++.++.+|+.+......||+
T Consensus 35 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~fD~ 105 (211)
T 3e23_A 35 TKFLGELPAGAKILELGCGAGYQAEAMLA-AGF-DVDATDGSPELAAEASRRL-------GRPVRTMLFHQLDAIDAYDA 105 (211)
T ss_dssp HHHHTTSCTTCEEEESSCTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCCCCSCEEE
T ss_pred HHHHHhcCCCCcEEEECCCCCHHHHHHHH-cCC-eEEEECCCHHHHHHHHHhc-------CCceEEeeeccCCCCCcEEE
Confidence 34555567889999999999999999983 444 7999999999999999987 35678899888766678999
Q ss_pred EEECCCCC------ChhHHHHHHHHhhCCCcEEEEEcccccchhHHH-----HHHHHHHHHHHHHhcC-CceeeeeeEEE
Q 036185 967 VCLGLIPT------SENSWVTAVQALRSEGGTLHVHGNVKDSEEKLW-----AEHVSKSIYEIARSEG-HRWEVTIEHIE 1034 (1057)
Q Consensus 967 Vil~~~P~------~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~-----~~~~~~~i~~~~~~~g-~~~~~~~~~~~ 1034 (1057)
|++...-. ....+..+.++|+ +||++++............ ...-.+.+.+++++.| +.+ ..++
T Consensus 106 v~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~----~~~~ 180 (211)
T 3e23_A 106 VWAHACLLHVPRDELADVLKLIWRALK-PGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWAS----VAVE 180 (211)
T ss_dssp EEECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSE----EEEE
T ss_pred EEecCchhhcCHHHHHHHHHHHHHhcC-CCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEE----EEEE
Confidence 99975221 1345777777887 6999888765443210000 0001346677788888 863 2233
Q ss_pred EeEeecC----CceEEEEEEE
Q 036185 1035 RVKWYAP----HIRHLVADVG 1051 (1057)
Q Consensus 1035 ~Vk~~aP----~~~h~~~d~~ 1051 (1057)
......+ ..|+.++.-.
T Consensus 181 ~~~~~~~~~~~~~wl~~~~~~ 201 (211)
T 3e23_A 181 SSEGKGFDQELAQFLHVSVRK 201 (211)
T ss_dssp EEEEECTTSCEEEEEEEEEEC
T ss_pred eccCCCCCCCCceEEEEEEec
Confidence 3334333 3366665443
No 146
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.84 E-value=5.9e-09 Score=119.48 Aligned_cols=105 Identities=16% Similarity=0.112 Sum_probs=80.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc--CCCccEEEEeCCccccCCC---CCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN--SVSDHCIVLEGDNRFTAPK---GVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N--~~~~~v~~~~~D~~~~~~~---~~~D~V 967 (1057)
+.+|++|||+|||+|.+++.+| ..+.+|++||+|+.+++.+++|++.+ ++ ++++++++|+.++++. ..||.|
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA--~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALM--SKASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred cCCCCEEEEeCCCchHHHHHHH--hcCCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhccCCCceEE
Confidence 3458999999999999999988 34568999999999999999999999 88 4899999999987542 479999
Q ss_pred EECCCCCChh-------------HHHHHHHHhhCCCcEEEEEcccccc
Q 036185 968 CLGLIPTSEN-------------SWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 968 il~~~P~~~~-------------~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
++|| |.... .+......|......+.+ -+++-.
T Consensus 168 ~lDP-Prr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~v-K~sP~l 213 (410)
T 3ll7_A 168 YVDP-ARRSGADKRVYAIADCEPDLIPLATELLPFCSSILA-KLSPMI 213 (410)
T ss_dssp EECC-EEC-----CCCCGGGEESCHHHHHHHHGGGSSEEEE-EECTTS
T ss_pred EECC-CCcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEE-EcCCCC
Confidence 9999 75432 266666656533444433 334433
No 147
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.84 E-value=7.5e-09 Score=117.69 Aligned_cols=99 Identities=17% Similarity=0.189 Sum_probs=81.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++ +.++++|+|+|+++ +++.+++|++.|++.++++++++|+.+.. +..+||+|+.++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la-~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~ 141 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAA-KAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEW 141 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHH-HTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECC
T ss_pred cCCCCEEEEEeccchHHHHHHH-HCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcc
Confidence 3578999999999999999998 45788999999995 99999999999999888999999999874 346899999976
Q ss_pred CCCC-------hhHHHHHHHHhhCCCcEEE
Q 036185 972 IPTS-------ENSWVTAVQALRSEGGTLH 994 (1057)
Q Consensus 972 ~P~~-------~~~~~~a~~~l~~~gg~l~ 994 (1057)
+.+. ...+..+.++|+ +||+++
T Consensus 142 ~~~~l~~~~~~~~~l~~~~r~Lk-pgG~li 170 (349)
T 3q7e_A 142 MGYCLFYESMLNTVLHARDKWLA-PDGLIF 170 (349)
T ss_dssp CBBTBTBTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred ccccccCchhHHHHHHHHHHhCC-CCCEEc
Confidence 3221 233445557777 799875
No 148
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.84 E-value=1.6e-08 Score=108.42 Aligned_cols=143 Identities=15% Similarity=0.049 Sum_probs=99.6
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECCCC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGLIP 973 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~~P 973 (1057)
++.+|||++||+|.+++.++ ..+..+|+++|+++.+++.+++++..++. .++.++.+|+.+... ...||+|+++...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLL-LPLFREVDMVDITEDFLVQAKTYLGEEGK-RVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTT-TTTCSEEEEEESCHHHHHHHHHHTGGGGG-GEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCCEEEEECCCCCHHHHHHH-HhcCCEEEEEeCCHHHHHHHHHHhhhcCC-ceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 57899999999999999887 34466899999999999999999988763 379999999887654 3479999987422
Q ss_pred -CC-----hhHHHHHHHHhhCCCcEEEEEcccccc-----hhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEeecCC
Q 036185 974 -TS-----ENSWVTAVQALRSEGGTLHVHGNVKDS-----EEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKWYAPH 1042 (1057)
Q Consensus 974 -~~-----~~~~~~a~~~l~~~gg~l~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~~aP~ 1042 (1057)
+. ...+..+.++|+ +||+|.+.++.... ..........+.+.+++++.|+. +.+++....+...
T Consensus 157 ~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~----~~~~~~~~~~~~~ 231 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLR-PNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLS----LLAEERQENLPDE 231 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCC----EEEEEECCSCCTT
T ss_pred hhCCHHHHHHHHHHHHHhcC-CCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCe----EEEeeecCCCcch
Confidence 11 255777778887 69999987654321 00000000134667778888975 3334445555444
Q ss_pred ce
Q 036185 1043 IR 1044 (1057)
Q Consensus 1043 ~~ 1044 (1057)
.+
T Consensus 232 ~~ 233 (241)
T 2ex4_A 232 IY 233 (241)
T ss_dssp SC
T ss_pred hh
Confidence 43
No 149
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.83 E-value=5.3e-09 Score=111.84 Aligned_cols=106 Identities=16% Similarity=0.196 Sum_probs=86.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----C--CCcc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----K--GVAN 965 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~--~~~D 965 (1057)
.++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.++++++.+|+.+.++ . ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4678999999999999999984333 358999999999999999999999998789999999876543 1 6799
Q ss_pred EEEECCCC-CChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 966 RVCLGLIP-TSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 966 ~Vil~~~P-~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.|+++... .....+..+.++|+ +||+|.+.....
T Consensus 151 ~V~~d~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 185 (232)
T 3cbg_A 151 LIFIDADKRNYPRYYEIGLNLLR-RGGLMVIDNVLW 185 (232)
T ss_dssp EEEECSCGGGHHHHHHHHHHTEE-EEEEEEEECTTG
T ss_pred EEEECCCHHHHHHHHHHHHHHcC-CCeEEEEeCCCc
Confidence 99999732 22556788888888 799999976654
No 150
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.83 E-value=1.2e-08 Score=106.91 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=82.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|++++.++.. +.+|+++|+++.+++.+++|++.+++. +++++++|+.+..+ ...||+|+++.
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQARAPFDAIIVTA 151 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCccCCCccEEEEcc
Confidence 467899999999999999999844 567999999999999999999999987 79999999988654 45799999975
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
..... ...+.+.|+ +||+|.+....
T Consensus 152 ~~~~~--~~~~~~~L~-pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 APPEI--PTALMTQLD-EGGILVLPVGE 176 (210)
T ss_dssp BCSSC--CTHHHHTEE-EEEEEEEEECS
T ss_pred chhhh--hHHHHHhcc-cCcEEEEEEcC
Confidence 22221 124667777 69988887665
No 151
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.82 E-value=5.5e-08 Score=103.28 Aligned_cols=108 Identities=12% Similarity=0.083 Sum_probs=86.3
Q ss_pred hhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC----ccEEEEeCCccccCC-CCCc
Q 036185 890 ARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS----DHCIVLEGDNRFTAP-KGVA 964 (1057)
Q Consensus 890 ~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~----~~v~~~~~D~~~~~~-~~~~ 964 (1057)
...+.++.+|||++||+|.+++.++. .++ +|+++|+++.+++.+++++..+++. +++.++.+|+..... ...|
T Consensus 25 ~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 102 (235)
T 3sm3_A 25 HNYLQEDDEILDIGCGSGKISLELAS-KGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSF 102 (235)
T ss_dssp HHHCCTTCEEEEETCTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCE
T ss_pred HHhCCCCCeEEEECCCCCHHHHHHHh-CCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCce
Confidence 33456889999999999999999984 444 7999999999999999999988873 468999999987643 5679
Q ss_pred cEEEECCC----CCCh---hHHHHHHHHhhCCCcEEEEEcccc
Q 036185 965 NRVCLGLI----PTSE---NSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 965 D~Vil~~~----P~~~---~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|+|++... |... ..+..+.++|+ +||+|++.++..
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 144 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLK-PGAYLYLVEFGQ 144 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEE-EEEEEEEEEEBC
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcC-CCeEEEEEECCc
Confidence 99998642 2223 56777778887 699999887654
No 152
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.82 E-value=5.3e-09 Score=111.74 Aligned_cols=128 Identities=10% Similarity=-0.027 Sum_probs=94.7
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC--
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI-- 972 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~-- 972 (1057)
++.+|||++||+|.+++.++ ....+|+++|+++.+++.+++++..++...++.++++|+.+..+...||+|++...
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~--~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMA--SPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFC 143 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHC--BTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTT
T ss_pred CCCCEEEeCCCCCHHHHHHH--hCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhh
Confidence 44599999999999999987 34457999999999999999999887666689999999999776668999997542
Q ss_pred --C--CChhHHHHHHHHhhCCCcEEEEEcccccchhHH-HHHHHHHHHHHHHHhcCCc
Q 036185 973 --P--TSENSWVTAVQALRSEGGTLHVHGNVKDSEEKL-WAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 --P--~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~g~~ 1025 (1057)
| .....+..+.++|+ +||+|++..+........ +.....+.+.+++++.|+.
T Consensus 144 ~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 200 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLK-PDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFK 200 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEE-EEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEE
T ss_pred cCCHHHHHHHHHHHHHHCC-CCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCe
Confidence 2 22455777778887 699998877654321100 0001134667777788865
No 153
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.82 E-value=5.6e-08 Score=108.22 Aligned_cols=146 Identities=14% Similarity=0.114 Sum_probs=101.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH---cCCCccEEEEeCCccccC---CCCCccEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA---NSVSDHCIVLEGDNRFTA---PKGVANRV 967 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~---N~~~~~v~~~~~D~~~~~---~~~~~D~V 967 (1057)
.++.+|||++||.|.++..+++..+..+|++||+++.+++.+++++.. .....+++++.+|+.+++ ....||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 567899999999999999998443467899999999999999998742 212347999999998876 35679999
Q ss_pred EECCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeeeeEEEEeEe
Q 036185 968 CLGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTIEHIERVKW 1038 (1057)
Q Consensus 968 il~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~~Vk~ 1038 (1057)
++|+ +.. ..++..+.++|+ +||++.+........ ....+.+.+.+++.|+.. +.+. ...|-+
T Consensus 174 i~d~-~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~~~~-----~~~~~~~~~~l~~~GF~~-v~~~-~~~vP~ 244 (304)
T 3bwc_A 174 IIDT-TDPAGPASKLFGEAFYKDVLRILK-PDGICCNQGESIWLD-----LELIEKMSRFIRETGFAS-VQYA-LMHVPT 244 (304)
T ss_dssp EEEC-C---------CCHHHHHHHHHHEE-EEEEEEEEECCTTTC-----HHHHHHHHHHHHHHTCSE-EEEE-ECCCTT
T ss_pred EECC-CCccccchhhhHHHHHHHHHHhcC-CCcEEEEecCCcccc-----hHHHHHHHHHHHhCCCCc-EEEE-Eeeccc
Confidence 9987 322 466778888888 799998875543221 122455666677778752 1111 111334
Q ss_pred ecCCceEEEE
Q 036185 1039 YAPHIRHLVA 1048 (1057)
Q Consensus 1039 ~aP~~~h~~~ 1048 (1057)
|..+.|.+++
T Consensus 245 yp~g~w~f~~ 254 (304)
T 3bwc_A 245 YPCGSIGTLV 254 (304)
T ss_dssp STTSCCEEEE
T ss_pred ccCcceEEEE
Confidence 4446666655
No 154
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.81 E-value=5.4e-08 Score=109.51 Aligned_cols=106 Identities=16% Similarity=0.188 Sum_probs=84.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc--CC-CccEEEEeCCccccCC---CCCccEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN--SV-SDHCIVLEGDNRFTAP---KGVANRV 967 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N--~~-~~~v~~~~~D~~~~~~---~~~~D~V 967 (1057)
..+.+|||++||+|.+++.+++..+..+|++||+++.+++.+++|+... ++ ..+++++.+|+.++++ ...||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4678999999999999999985444678999999999999999998753 45 2479999999988753 4579999
Q ss_pred EECCC-CC-------ChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLI-PT-------SENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~-P~-------~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++|+. |. ...++..+.++|+ +||+|.+...+.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 238 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALR-PGGVVCTQAESL 238 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEE-EEEEEEEECCCT
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcC-CCcEEEEecCCc
Confidence 99873 11 2456778888888 799999975443
No 155
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.81 E-value=7.1e-09 Score=105.22 Aligned_cols=103 Identities=12% Similarity=0.016 Sum_probs=79.6
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL 971 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~ 971 (1057)
.+.+..+|||++||+|+++++++......+|+|+|+|+.+++.+++|+..||+.+++.+ .|.....+...||+|++..
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k 123 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLK 123 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEET
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhh
Confidence 35668899999999999999996333334899999999999999999999999877777 6665555667799998754
Q ss_pred C-CCC---hhHHHHHHHHhhCCCcEEEEEc
Q 036185 972 I-PTS---ENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 972 ~-P~~---~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
+ |.- ...+...++.|+ +||+++...
T Consensus 124 ~LHlL~~~~~al~~v~~~L~-pggvfISfp 152 (200)
T 3fzg_A 124 MLPVLKQQDVNILDFLQLFH-TQNFVISFP 152 (200)
T ss_dssp CHHHHHHTTCCHHHHHHTCE-EEEEEEEEE
T ss_pred HHHhhhhhHHHHHHHHHHhC-CCCEEEEeC
Confidence 2 221 233557777787 688888877
No 156
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.80 E-value=4.9e-08 Score=109.31 Aligned_cols=106 Identities=12% Similarity=0.033 Sum_probs=87.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC-
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL- 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~- 971 (1057)
..++.+|||++||+|.+++.+++..++ +|+++|+++.+++.+++++..+++.+++.++.+|+.++. ..||+|++..
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~fD~v~~~~~ 164 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--EPVDRIVSIEA 164 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC--CCCSEEEEESC
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC--CCcCEEEEeCh
Confidence 357889999999999999999854355 799999999999999999999998878999999998763 6799999863
Q ss_pred ---CC--CChhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 972 ---IP--TSENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 972 ---~P--~~~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+| .....+..+.++|+ +||++.+++.....
T Consensus 165 l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 165 FEHFGHENYDDFFKRCFNIMP-ADGRMTVQSSVSYH 199 (318)
T ss_dssp GGGTCGGGHHHHHHHHHHHSC-TTCEEEEEEEECCC
T ss_pred HHhcCHHHHHHHHHHHHHhcC-CCcEEEEEEeccCC
Confidence 12 22556777788887 79999998887654
No 157
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.80 E-value=2e-08 Score=110.64 Aligned_cols=104 Identities=15% Similarity=0.129 Sum_probs=85.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++.... ..+|+++|++|.+++.+++++..++. ++.++.+|+.+......||.|++..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~~ 97 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIELNDKYDIAICHA 97 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCCSSCEEEEEEES
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCcCCCeeEEEECC
Confidence 45788999999999999999984333 46899999999999999999988776 7999999999866556899999865
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
. |.....+..+.++|+ +||++.+.+..
T Consensus 98 ~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 128 (284)
T 3gu3_A 98 FLLHMTTPETMLQKMIHSVK-KGGKIICFEPH 128 (284)
T ss_dssp CGGGCSSHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred hhhcCCCHHHHHHHHHHHcC-CCCEEEEEecc
Confidence 3 333566788888888 69999987765
No 158
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.80 E-value=2.1e-08 Score=110.47 Aligned_cols=128 Identities=14% Similarity=0.065 Sum_probs=79.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEec-CHHHHHHHHHHH-----HHcCCC----ccEEEEeCCccc----cC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEW-NPCAVEALKHNL-----QANSVS----DHCIVLEGDNRF----TA 959 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~-n~~ai~~~~~N~-----~~N~~~----~~v~~~~~D~~~----~~ 959 (1057)
.++.+|||++||+|.+++.++ +.++.+|+++|+ ++.+++.+++|+ +.|++. +++.++..|..+ +.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a-~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAF-LAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHH-HTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHH-HcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 578899999999999999888 457768999999 899999999999 555554 468888555332 21
Q ss_pred ---CCCCccEEEECCCCCCh----hHHHHHHHHhhC--C--CcEEEEEcccccchhHHHHHHHHHHHHHHHHhcC-Cce
Q 036185 960 ---PKGVANRVCLGLIPTSE----NSWVTAVQALRS--E--GGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEG-HRW 1026 (1057)
Q Consensus 960 ---~~~~~D~Vil~~~P~~~----~~~~~a~~~l~~--~--gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g-~~~ 1026 (1057)
....||+|++..+.... ..+....++|+. + ||.+++....+.... .+....+.+.+++.| +.+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~----~~~~~~~~~~l~~~G~f~v 231 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL----AERDLAFFRLVNADGALIA 231 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC------------CTHHHHHHHHSTTEEE
T ss_pred hhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc----chhHHHHHHHHHhcCCEEE
Confidence 24679999983324432 334444455541 5 887666433332110 111234445667778 654
No 159
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.79 E-value=5.3e-08 Score=106.29 Aligned_cols=130 Identities=13% Similarity=0.051 Sum_probs=99.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC-
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL- 971 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~- 971 (1057)
.++.+|||++||+|.+++.+++.. ..+|+++|+++.+++.+++++..+++.+++.++.+|+.+... ...||+|++..
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 138 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALES 138 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEech
Confidence 578999999999999999998544 457999999999999999999999998789999999988542 46799998753
Q ss_pred ---CCCChhHHHHHHHHhhCCCcEEEEEcccccchhH----HHHHHH-----------HHHHHHHHHhcCCc
Q 036185 972 ---IPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEK----LWAEHV-----------SKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ---~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~----~~~~~~-----------~~~i~~~~~~~g~~ 1025 (1057)
+|.....+..+.++|+ +||++.+++........ .....+ .+.+.+++++.|+.
T Consensus 139 l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 209 (273)
T 3bus_A 139 LHHMPDRGRALREMARVLR-PGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELV 209 (273)
T ss_dssp TTTSSCHHHHHHHHHTTEE-EEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCE
T ss_pred hhhCCCHHHHHHHHHHHcC-CCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCe
Confidence 2333566777778887 79999998876532110 111111 14677888888875
No 160
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.79 E-value=1.5e-08 Score=111.76 Aligned_cols=100 Identities=11% Similarity=-0.001 Sum_probs=82.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++. .++ +|+++|+++.+++.+++++..+++ ++.++++|+.+......||+|+++.+-
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~-~g~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~i~~~~~~ 194 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSL-LGY-DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANIQENYDFIVSTVVF 194 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCCCSCEEEEEECSSG
T ss_pred cCCCcEEEECCCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccccCCccEEEEccch
Confidence 3788999999999999999983 455 799999999999999999999998 699999999987666789999997632
Q ss_pred C------ChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 974 T------SENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 974 ~------~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
+ ....+..+.++|+ +||++++...
T Consensus 195 ~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 224 (286)
T 3m70_A 195 MFLNRERVPSIIKNMKEHTN-VGGYNLIVAA 224 (286)
T ss_dssp GGSCGGGHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcC-CCcEEEEEEe
Confidence 1 2356777777787 6998666544
No 161
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.79 E-value=1.2e-08 Score=112.33 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=83.4
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc-CC--------CccEEEEeCCccccCC-CCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN-SV--------SDHCIVLEGDNRFTAP-KGV 963 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N-~~--------~~~v~~~~~D~~~~~~-~~~ 963 (1057)
.++.+|||++||+|.+++.+++. +..+|++||++|.+++.+++|++.| ++ ..+++++.+|+.++++ ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 56789999999999999999854 6778999999999999999998221 33 3579999999987654 457
Q ss_pred ccEEEECCCCC---------ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 964 ANRVCLGLIPT---------SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 964 ~D~Vil~~~P~---------~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
||+|++|+ |. ...++..+.+.|+ +||++.+....
T Consensus 153 fD~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~~~ 195 (281)
T 1mjf_A 153 FDVIIADS-TDPVGPAKVLFSEEFYRYVYDALN-NPGIYVTQAGS 195 (281)
T ss_dssp EEEEEEEC-CCCC-----TTSHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred eeEEEECC-CCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEEcCC
Confidence 99999998 43 2556778888888 69999887544
No 162
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.78 E-value=1.2e-08 Score=109.32 Aligned_cols=105 Identities=14% Similarity=0.136 Sum_probs=86.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----------
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----------- 960 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----------- 960 (1057)
..++.+|||++||+|++++.+|...+ ..+|+++|+++.+++.+++|++.+++.+++.++.+|+.+.++
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 35688999999999999999985543 568999999999999999999999998779999999877543
Q ss_pred ------C-CCccEEEECCCC-CChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 961 ------K-GVANRVCLGLIP-TSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 961 ------~-~~~D~Vil~~~P-~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
. ..||.|+++... .....+..+.++|+ +||+|.+...
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~-pgG~lv~~~~ 182 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLK-PGGLLIADNV 182 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEE-EEEEEEEECS
T ss_pred cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcC-CCeEEEEEcc
Confidence 1 679999998622 12355777888888 7999998764
No 163
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.77 E-value=2.5e-08 Score=105.50 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=82.8
Q ss_pred hccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEE
Q 036185 891 RLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCL 969 (1057)
Q Consensus 891 ~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil 969 (1057)
....++.+|||++||+|.+++.++ ..+. +|+++|+++.+++.+++|++.++ .+++++++|+.+.. +...||.|++
T Consensus 34 ~~~~~~~~vLDlG~G~G~~~~~l~-~~~~-~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 34 KYMKKRGKVLDLACGVGGFSFLLE-DYGF-EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp HSCCSCCEEEEETCTTSHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred HhcCCCCeEEEEeccCCHHHHHHH-HcCC-EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCCCCCCcEEEEEE
Confidence 344568899999999999999887 3444 89999999999999999999988 36999999998854 3457999999
Q ss_pred CCC--CCC----hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 970 GLI--PTS----ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 970 ~~~--P~~----~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+.+ -.. ...+..+.++|+ +||++.+....
T Consensus 110 ~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIVHFEPLELNQVFKEVRRVLK-PSGKFIMYFTD 144 (227)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHEE-EEEEEEEEEEC
T ss_pred cCchHhCCHHHHHHHHHHHHHHcC-CCcEEEEEecC
Confidence 873 111 344666777777 69988887664
No 164
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.75 E-value=4.8e-08 Score=109.48 Aligned_cols=104 Identities=21% Similarity=0.238 Sum_probs=83.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~ 970 (1057)
..++++|||++||+|.+++.+++..+ ..+|+++|+++.+++.+++|++.+++. +++++.+|+.+.++ ...||+|+++
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccccCCCeEEEEEc
Confidence 46789999999999999999985543 257999999999999999999999997 59999999988654 4579999998
Q ss_pred CCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 971 LIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 971 ~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. +.. .....+.+.|+ +||++++.....
T Consensus 152 ~-~~~-~~~~~~~~~Lk-pgG~lvi~~~~~ 178 (317)
T 1dl5_A 152 V-GVD-EVPETWFTQLK-EGGRVIVPINLK 178 (317)
T ss_dssp S-BBS-CCCHHHHHHEE-EEEEEEEEBCBG
T ss_pred C-CHH-HHHHHHHHhcC-CCcEEEEEECCC
Confidence 7 322 11245566777 799999886544
No 165
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.75 E-value=1.1e-07 Score=104.02 Aligned_cols=104 Identities=13% Similarity=0.189 Sum_probs=86.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.++..++......+|+++|+++.+++.+++++..+++. ++.++.+|+.+... ...||+|++..
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCCCCCeeEEEEec
Confidence 36789999999999999999985543568999999999999999999999987 69999999998653 56799999864
Q ss_pred ----CCCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 972 ----IPTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 972 ----~P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
+|.....+..+.++|+ +||++.+.+.
T Consensus 114 ~l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 143 (276)
T 3mgg_A 114 VLEHLQSPEEALKSLKKVLK-PGGTITVIEG 143 (276)
T ss_dssp CGGGCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHcC-CCcEEEEEEc
Confidence 2344567888888888 7999988764
No 166
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.74 E-value=3.1e-08 Score=111.62 Aligned_cols=99 Identities=18% Similarity=0.194 Sum_probs=80.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++ +.++.+|+|+|++ .+++.++++++.|++.++++++++|+.+... ..+||+|++++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la-~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~ 113 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAA-KHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEW 113 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHH-HTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECC
T ss_pred hcCCCEEEEecCccHHHHHHHH-HCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeC
Confidence 3578899999999999999988 4577789999999 5999999999999998889999999988643 36799999986
Q ss_pred CCCC-------hhHHHHHHHHhhCCCcEEE
Q 036185 972 IPTS-------ENSWVTAVQALRSEGGTLH 994 (1057)
Q Consensus 972 ~P~~-------~~~~~~a~~~l~~~gg~l~ 994 (1057)
+-+. ...+....+.|+ +||++.
T Consensus 114 ~~~~l~~~~~~~~~l~~~~~~Lk-pgG~li 142 (328)
T 1g6q_1 114 MGYFLLYESMMDTVLYARDHYLV-EGGLIF 142 (328)
T ss_dssp CBTTBSTTCCHHHHHHHHHHHEE-EEEEEE
T ss_pred chhhcccHHHHHHHHHHHHhhcC-CCeEEE
Confidence 3222 233444456777 799886
No 167
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.74 E-value=6.8e-08 Score=104.25 Aligned_cols=106 Identities=13% Similarity=0.102 Sum_probs=83.2
Q ss_pred HHHhhccC--CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCC
Q 036185 887 LRMARLDC--KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGV 963 (1057)
Q Consensus 887 ~r~~~~~~--~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~ 963 (1057)
..+...+. ++.+|||++||+|.++..++ ..+..+|+++|+++.+++.+++++. ..++.++++|+.+... ...
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~ 108 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAA-EHGAKKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIAIEPDA 108 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCCCCTTC
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHH-HcCCCEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCCCCCCC
Confidence 34444443 78899999999999999998 4566689999999999999999876 3479999999987643 568
Q ss_pred ccEEEECCC----CCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 964 ANRVCLGLI----PTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 964 ~D~Vil~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
||+|++... +.....+..+.++|+ +||+|.+...
T Consensus 109 fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~ 146 (253)
T 3g5l_A 109 YNVVLSSLALHYIASFDDICKKVYINLK-SSGSFIFSVE 146 (253)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred eEEEEEchhhhhhhhHHHHHHHHHHHcC-CCcEEEEEeC
Confidence 999998652 333566777888888 6999888643
No 168
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.74 E-value=1.7e-08 Score=114.64 Aligned_cols=100 Identities=19% Similarity=0.265 Sum_probs=81.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++ +.++.+|+|+|+++ +++.++++++.|++.++++++++|+.+.....+||+|+.+++-
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la-~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAA-QAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 126 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHH-HTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCB
T ss_pred CCcCEEEEcCCCccHHHHHHH-hCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCch
Confidence 578899999999999999988 46777899999997 7899999999999977899999999986544679999998632
Q ss_pred C------ChhHHHHHHHHhhCCCcEEEEE
Q 036185 974 T------SENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 974 ~------~~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
. ....+..+.+.|+ +||++.+.
T Consensus 127 ~~~~~~~~~~~l~~~~~~Lk-pgG~li~~ 154 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLK-PSGNMFPT 154 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEE-EEEEEESC
T ss_pred hcCChHHHHHHHHHHHhhcC-CCeEEEEe
Confidence 2 1244555666776 69987643
No 169
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.74 E-value=3.5e-08 Score=109.54 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=88.4
Q ss_pred CHHHHHHHhhcc-CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC--ccEEEEeCCcccc
Q 036185 882 NLSEKLRMARLD-CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS--DHCIVLEGDNRFT 958 (1057)
Q Consensus 882 ~~~er~r~~~~~-~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~--~~v~~~~~D~~~~ 958 (1057)
...+...++..+ ..+.+|||++||+|.+++.++ ..+ .+|+++|+++.+++.+++++..+++. .++.++++|+.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~-~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 145 (299)
T 3g2m_A 68 GTSEAREFATRTGPVSGPVLELAAGMGRLTFPFL-DLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAF 145 (299)
T ss_dssp CHHHHHHHHHHHCCCCSCEEEETCTTTTTHHHHH-TTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBC
T ss_pred ccHHHHHHHHhhCCCCCcEEEEeccCCHHHHHHH-HcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcC
Confidence 344444555543 345599999999999999998 344 46999999999999999999988752 4799999999987
Q ss_pred CCCCCccEEEEC-----CCCC--ChhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 959 APKGVANRVCLG-----LIPT--SENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 959 ~~~~~~D~Vil~-----~~P~--~~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
.....||.|++. .++. ....+..+.++|+ +||+|++......
T Consensus 146 ~~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 146 ALDKRFGTVVISSGSINELDEADRRGLYASVREHLE-PGGKFLLSLAMSE 194 (299)
T ss_dssp CCSCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEE-EEEEEEEEEECCH
T ss_pred CcCCCcCEEEECCcccccCCHHHHHHHHHHHHHHcC-CCcEEEEEeecCc
Confidence 656789998864 1111 1455777778887 7999998876553
No 170
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.73 E-value=9.2e-08 Score=100.75 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=78.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++. .+ .+|+++|+++.+++.+++++. .++.++++|+.+......||.|+++..-
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~~~fD~v~~~~~l 116 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLL-AG-RTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVPTSIDTIVSTYAF 116 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHH-TT-CEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCCSCCSEEEEESCG
T ss_pred cCCCeEEEeCCCCCHHHHHHHh-CC-CeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCCCCeEEEEECcch
Confidence 4788999999999999999984 44 479999999999999999865 3688999999987545789999997522
Q ss_pred CC----hh--HHHHHHHHhhCCCcEEEEEccc
Q 036185 974 TS----EN--SWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 974 ~~----~~--~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
.. .. .+..+.++|+ +||++.+.+..
T Consensus 117 ~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 147 (220)
T 3hnr_A 117 HHLTDDEKNVAIAKYSQLLN-KGGKIVFADTI 147 (220)
T ss_dssp GGSCHHHHHHHHHHHHHHSC-TTCEEEEEEEC
T ss_pred hcCChHHHHHHHHHHHHhcC-CCCEEEEEecc
Confidence 21 22 6777777887 79999888644
No 171
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.73 E-value=1.1e-08 Score=120.85 Aligned_cols=99 Identities=19% Similarity=0.269 Sum_probs=79.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.+| +.++.+|+|+|+++ +++.+++|++.|++.++++++++|++++....+||+|+++++-
T Consensus 157 ~~~~~VLDiGcGtG~la~~la-~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAA-QAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 234 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHH-HTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCH
T ss_pred cCCCEEEEecCcccHHHHHHH-HcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCch
Confidence 468899999999999999988 46777899999999 9999999999999977999999999985434579999998731
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEE
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHV 995 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~ 995 (1057)
+. ...+..+.+.|+ +||++.+
T Consensus 235 ~~~~~e~~~~~l~~~~~~Lk-pgG~li~ 261 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLK-PSGNMFP 261 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEE-EEEEEES
T ss_pred HhcCcHHHHHHHHHHHHhcC-CCCEEEE
Confidence 11 223444456666 6887763
No 172
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.73 E-value=6.8e-08 Score=111.23 Aligned_cols=132 Identities=16% Similarity=0.142 Sum_probs=98.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHc-----C-CC-ccEEEEeCCcccc------
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQAN-----S-VS-DHCIVLEGDNRFT------ 958 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N-----~-~~-~~v~~~~~D~~~~------ 958 (1057)
..++.+|||++||+|.+++.++... ...+|+++|+++.+++.+++|++.+ | +. .++.++++|+.+.
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3468899999999999999998553 2447999999999999999999876 4 32 4799999999875
Q ss_pred -CCCCCccEEEECCC----CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHH-------------HHHHHHHHHH
Q 036185 959 -APKGVANRVCLGLI----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEH-------------VSKSIYEIAR 1020 (1057)
Q Consensus 959 -~~~~~~D~Vil~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~-------------~~~~i~~~~~ 1020 (1057)
++...||+|+++.. |.....+..+.++|+ +||+|.+.+............. ..+.+.++++
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 239 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLR-DGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVA 239 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcC-CCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHH
Confidence 23568999998753 333567888888898 6999999876543221110000 1156778888
Q ss_pred hcCCc
Q 036185 1021 SEGHR 1025 (1057)
Q Consensus 1021 ~~g~~ 1025 (1057)
+.|+.
T Consensus 240 ~aGF~ 244 (383)
T 4fsd_A 240 EAGFR 244 (383)
T ss_dssp HTTCC
T ss_pred HCCCc
Confidence 89985
No 173
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.72 E-value=4.7e-08 Score=110.86 Aligned_cols=131 Identities=21% Similarity=0.215 Sum_probs=95.5
Q ss_pred CCEEEEEecceeEeeCCCHH-HHHHHhhcc--CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH
Q 036185 865 NGILYSFDATKCMFSWGNLS-EKLRMARLD--CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA 941 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~~-er~r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~ 941 (1057)
.++.+...+.- |+..... ....++..+ ..+.+|||++||+|.+++.++......+|+++|+++.+++.+++|++.
T Consensus 165 ~~~~~~~~~gv--f~~~~~d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~ 242 (343)
T 2pjd_A 165 DGLTVKTLPGV--FSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA 242 (343)
T ss_dssp TTEEEEECTTC--TTSSSCCHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH
T ss_pred cceEEEecCCc--cCCCCCcHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Confidence 45555555442 4444332 233344433 356799999999999999998543334799999999999999999999
Q ss_pred cCCCccEEEEeCCccccCCCCCccEEEECCCCCC----------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 942 NSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPTS----------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 942 N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~~----------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|++. +.++.+|+.+.. ...||.|++++ |.. ...+..+.+.|+ +||.+++..+.+..
T Consensus 243 ~~~~--~~~~~~d~~~~~-~~~fD~Iv~~~-~~~~g~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~ 308 (343)
T 2pjd_A 243 NGVE--GEVFASNVFSEV-KGRFDMIISNP-PFHDGMQTSLDAAQTLIRGAVRHLN-SGGELRIVANAFLP 308 (343)
T ss_dssp TTCC--CEEEECSTTTTC-CSCEEEEEECC-CCCSSSHHHHHHHHHHHHHHGGGEE-EEEEEEEEEETTSS
T ss_pred hCCC--CEEEEccccccc-cCCeeEEEECC-CcccCccCCHHHHHHHHHHHHHhCC-CCcEEEEEEcCCCC
Confidence 9986 567899998765 45799999998 532 234666667777 79999998876643
No 174
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.72 E-value=5.7e-08 Score=103.47 Aligned_cols=105 Identities=17% Similarity=0.156 Sum_probs=84.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++......+|+++|+++.+++.+++++..++ ++.++++|+.+......||.|++...
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~ 118 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDFEEKYDMVVSALS 118 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCCCSCEEEEEEESC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCCCCCceEEEEeCc
Confidence 356889999999999999999854435679999999999999999987665 69999999998765678999998753
Q ss_pred CCC----h--hHHHHHHHHhhCCCcEEEEEccccc
Q 036185 973 PTS----E--NSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 973 P~~----~--~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
-+. . ..+..+.++|+ +||++.+.+....
T Consensus 119 l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~ 152 (234)
T 3dtn_A 119 IHHLEDEDKKELYKRSYSILK-ESGIFINADLVHG 152 (234)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECBC
T ss_pred cccCCHHHHHHHHHHHHHhcC-CCcEEEEEEecCC
Confidence 221 1 35777778887 7999999886654
No 175
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.72 E-value=1e-07 Score=100.02 Aligned_cols=101 Identities=14% Similarity=0.122 Sum_probs=81.1
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL 971 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~ 971 (1057)
...++.+|||++||+|.++..++.. ++ +|+++|+++.+++.+++ ++.. ++.++++|+.+..+...||+|+++.
T Consensus 43 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~----~~~~-~~~~~~~d~~~~~~~~~~D~v~~~~ 115 (218)
T 3ou2_A 43 AGNIRGDVLELASGTGYWTRHLSGL-AD-RVTALDGSAEMIAEAGR----HGLD-NVEFRQQDLFDWTPDRQWDAVFFAH 115 (218)
T ss_dssp TTTSCSEEEEESCTTSHHHHHHHHH-SS-EEEEEESCHHHHHHHGG----GCCT-TEEEEECCTTSCCCSSCEEEEEEES
T ss_pred cCCCCCeEEEECCCCCHHHHHHHhc-CC-eEEEEeCCHHHHHHHHh----cCCC-CeEEEecccccCCCCCceeEEEEec
Confidence 3567789999999999999999843 44 79999999999999998 5554 7999999999886677899999864
Q ss_pred CCCC------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPTS------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~~------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.-+. ...+..+.++|+ +||++.+.++..
T Consensus 116 ~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 149 (218)
T 3ou2_A 116 WLAHVPDDRFEAFWESVRSAVA-PGGVVEFVDVTD 149 (218)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEECC
T ss_pred hhhcCCHHHHHHHHHHHHHHcC-CCeEEEEEeCCC
Confidence 2221 445777777887 799998887754
No 176
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.71 E-value=2.5e-08 Score=111.32 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=82.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc--CC-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN--SV-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N--~~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
.++.+|||++||+|.+++.+++..+..+|++||++|.+++.+++|+... ++ ..+++++.+|+.++++ ...||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4678999999999999999985444678999999999999999998654 44 3589999999988763 46799999
Q ss_pred ECCCCCC---------hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 969 LGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 969 l~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+|+ +.. ..++..+.++|+ +||+|.+....
T Consensus 187 ~d~-~~~~~~~~~l~t~~~l~~~~~~Lk-pgG~lv~~~~~ 224 (314)
T 2b2c_A 187 TDS-SDPVGPAESLFGQSYYELLRDALK-EDGILSSQGES 224 (314)
T ss_dssp ECC-C-------------HHHHHHHHEE-EEEEEEEECCC
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHhhcC-CCeEEEEECCC
Confidence 998 332 456777788888 79999987643
No 177
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.70 E-value=7.3e-08 Score=119.01 Aligned_cols=81 Identities=12% Similarity=0.145 Sum_probs=69.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCC------------------------------------------CcEEEEEecCHHH
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAK------------------------------------------ARLVYACEWNPCA 931 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~------------------------------------------a~~V~avD~n~~a 931 (1057)
.+++.|+|+|||+|+|.|.+|.... ...|+|+|+||.|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 5688999999999999999985320 1369999999999
Q ss_pred HHHHHHHHHHcCCCccEEEEeCCccccCCC---CCccEEEECCCCCC
Q 036185 932 VEALKHNLQANSVSDHCIVLEGDNRFTAPK---GVANRVCLGLIPTS 975 (1057)
Q Consensus 932 i~~~~~N~~~N~~~~~v~~~~~D~~~~~~~---~~~D~Vil~~~P~~ 975 (1057)
++.+++|++.+|+.+.+.+.++|+.++.+. ..+|+||+|| |+.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NP-PYG 314 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNP-PYG 314 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECC-CCC
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCC-Ccc
Confidence 999999999999998899999999987532 2799999999 865
No 178
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.70 E-value=1.6e-08 Score=111.93 Aligned_cols=103 Identities=12% Similarity=0.180 Sum_probs=79.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC----------------------------
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS---------------------------- 945 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~---------------------------- 945 (1057)
.++.+|||++||+|.+++.+|...++.+|+|+|+++.+++.+++|++.++..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 3688999999999999999996656678999999999999999998776532
Q ss_pred -----------------------------ccEEEEeCCccccC------CCCCccEEEECCCC----------CChhHHH
Q 036185 946 -----------------------------DHCIVLEGDNRFTA------PKGVANRVCLGLIP----------TSENSWV 980 (1057)
Q Consensus 946 -----------------------------~~v~~~~~D~~~~~------~~~~~D~Vil~~~P----------~~~~~~~ 980 (1057)
++++++++|..... ....||+|++..+- .....+.
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 58999999987543 35679999987632 1234577
Q ss_pred HHHHHhhCCCcEEEEEc
Q 036185 981 TAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 981 ~a~~~l~~~gg~l~~~~ 997 (1057)
.+.++|+ +||+|++..
T Consensus 205 ~~~~~Lk-pGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLR-PGGILVLEP 220 (292)
T ss_dssp HHHHHEE-EEEEEEEEC
T ss_pred HHHHHhC-CCcEEEEec
Confidence 7778887 799998864
No 179
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.70 E-value=6.5e-08 Score=109.28 Aligned_cols=111 Identities=18% Similarity=0.185 Sum_probs=89.3
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC-----ccEEEEeCCccccCC--CCCc
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS-----DHCIVLEGDNRFTAP--KGVA 964 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~-----~~v~~~~~D~~~~~~--~~~~ 964 (1057)
...+|++|||||||.|+=++++|.......|+|+|+++.-++.+++|++..++. .++.+...|+..+.. ...|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 468899999999999999999985444557999999999999999999988763 478999999987643 5679
Q ss_pred cEEEECCCCCCh-----------------------------hHHHHHHHHhhCCCcEEEEEcccccchh
Q 036185 965 NRVCLGLIPTSE-----------------------------NSWVTAVQALRSEGGTLHVHGNVKDSEE 1004 (1057)
Q Consensus 965 D~Vil~~~P~~~-----------------------------~~~~~a~~~l~~~gg~l~~~~~~~~~~~ 1004 (1057)
|+|++|. |=+. ..+..|+++|+ +||+|+|.+|+-..++
T Consensus 225 D~VLlDa-PCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk-pGG~LVYsTCSl~~~E 291 (359)
T 4fzv_A 225 DRVLVDV-PCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATK-PGGHVVYSTCSLSHLQ 291 (359)
T ss_dssp EEEEEEC-CCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEE-EEEEEEEEESCCCTTT
T ss_pred CEEEECC-ccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCC-CCcEEEEEeCCCchhh
Confidence 9999998 6321 11555667777 7999999999865543
No 180
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.70 E-value=8.4e-08 Score=102.77 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=85.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.++..++. .+ .+|+++|+++.+++.++++++.+++. ++.++.+|+.+... ...||.|++..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSP-YV-QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFPDDSFDIITCRY 95 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGG-GS-SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSCTTCEEEEEEES
T ss_pred cCCCCEEEEEccCcCHHHHHHHH-hC-CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCCCCcEEEEEECC
Confidence 56789999999999999999883 34 47999999999999999999999987 79999999987543 46799999874
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. +.....+..+.++|+ +||++.+.+...
T Consensus 96 ~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 127 (239)
T 1xxl_A 96 AAHHFSDVRKAVREVARVLK-QDGRFLLVDHYA 127 (239)
T ss_dssp CGGGCSCHHHHHHHHHHHEE-EEEEEEEEEECB
T ss_pred chhhccCHHHHHHHHHHHcC-CCcEEEEEEcCC
Confidence 2 333566888888888 699998877654
No 181
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.70 E-value=2e-08 Score=113.99 Aligned_cols=101 Identities=12% Similarity=0.043 Sum_probs=82.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCC-----cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKA-----RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a-----~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vi 968 (1057)
.++.+|||++||+|.|.+.++..... ..|+|+|+++.+++.++.|+..+++ ++.++++|+........||+|+
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~~~~~fD~Ii 206 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANLLVDPVDVVI 206 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCCCCCCEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCccccCCccEEE
Confidence 35679999999999999998854322 5799999999999999999999998 4889999998765556799999
Q ss_pred ECCCCCC-----------------------hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 969 LGLIPTS-----------------------ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 969 l~~~P~~-----------------------~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.|| |.. ..++..+++.|+ +||++.+...
T Consensus 207 ~NP-Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk-~gG~~~~v~p 257 (344)
T 2f8l_A 207 SDL-PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTK-PGGYLFFLVP 257 (344)
T ss_dssp EEC-CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred ECC-CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhC-CCCEEEEEEC
Confidence 999 621 135777788888 6888777663
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.70 E-value=2.9e-08 Score=114.76 Aligned_cols=105 Identities=12% Similarity=0.103 Sum_probs=81.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHH-------HHHHHHcCCC-ccEEEEeCCcccc---C--
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEAL-------KHNLQANSVS-DHCIVLEGDNRFT---A-- 959 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~-------~~N~~~N~~~-~~v~~~~~D~~~~---~-- 959 (1057)
+.++++|||++||+|.+++.+|...++.+|+|+|+++.+++.+ ++|++.+++. ++++++++|.... +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 4678999999999999999999655777899999999999999 9999999953 5899999876531 1
Q ss_pred CCCCccEEEECCCCCC---hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 960 PKGVANRVCLGLIPTS---ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 960 ~~~~~D~Vil~~~P~~---~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
....||+|+++..... ...+.+..+.|+ +||.|+++..
T Consensus 320 ~~~~FDvIvvn~~l~~~d~~~~L~el~r~LK-pGG~lVi~d~ 360 (433)
T 1u2z_A 320 LIPQCDVILVNNFLFDEDLNKKVEKILQTAK-VGCKIISLKS 360 (433)
T ss_dssp HGGGCSEEEECCTTCCHHHHHHHHHHHTTCC-TTCEEEESSC
T ss_pred ccCCCCEEEEeCccccccHHHHHHHHHHhCC-CCeEEEEeec
Confidence 1346999999753321 233455666666 7999998853
No 183
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.69 E-value=1.3e-07 Score=102.55 Aligned_cols=104 Identities=17% Similarity=0.187 Sum_probs=84.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.++..++. .+ .+|+++|+++.+++.++++++.+++. ++.++.+|+.+.. +...||+|++..
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~fD~V~~~~ 111 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAP-FV-KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFTDERFHIVTCRI 111 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGG-GS-SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSCTTCEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHH-hC-CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCCCCCEEEEEEhh
Confidence 45789999999999999999883 34 48999999999999999999999987 7999999998854 346799999874
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. |.....+.++.++|+ +||+|.+.+...
T Consensus 112 ~l~~~~d~~~~l~~~~r~Lk-pgG~l~~~~~~~ 143 (260)
T 1vl5_A 112 AAHHFPNPASFVSEAYRVLK-KGGQLLLVDNSA 143 (260)
T ss_dssp CGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEB
T ss_pred hhHhcCCHHHHHHHHHHHcC-CCCEEEEEEcCC
Confidence 2 333567888888888 699998876543
No 184
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.69 E-value=5.5e-08 Score=107.43 Aligned_cols=107 Identities=12% Similarity=0.071 Sum_probs=86.2
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC--CCCCccEEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA--PKGVANRVCL 969 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~--~~~~~D~Vil 969 (1057)
.+.++.+|||++||+|.+++.++ ..+..+|+++|+++.+++.+++++..+++..++.++++|+.+.. +...||+|++
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYE-RAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHH-HHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred hCCCCCeEEEECCCCCHHHHHHH-HCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 35788999999999999999987 44666899999999999999999999988778999999998754 3557999998
Q ss_pred CCCCCC--------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 970 GLIPTS--------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 970 ~~~P~~--------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
....+. ...+..+.++|+ +||+|++.....
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 177 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLR-PGGYFIMTVPSR 177 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEE-EEEEEEEEEECH
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEECCH
Confidence 754321 344666677777 799988876543
No 185
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.69 E-value=1.6e-07 Score=102.55 Aligned_cols=107 Identities=13% Similarity=0.061 Sum_probs=84.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHH------HHHHHHHHHHHcCCCccEEEEeCC-c--cccC-CC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPC------AVEALKHNLQANSVSDHCIVLEGD-N--RFTA-PK 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~------ai~~~~~N~~~N~~~~~v~~~~~D-~--~~~~-~~ 961 (1057)
+.++.+|||++||+|.+++.++...+. .+|+++|+++. +++.++++++.+++.+++.++.+| . .... +.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCC
Confidence 468899999999999999999854343 58999999997 999999999999987789999998 2 2221 24
Q ss_pred CCccEEEECCC----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 962 GVANRVCLGLI----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 962 ~~~D~Vil~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
..||.|++... |. ...+...++.|+++||++.+.+...
T Consensus 121 ~~fD~v~~~~~l~~~~~-~~~~~~~~~~l~~~gG~l~~~~~~~ 162 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFAS-ANALALLFKNMAAVCDHVDVAEWSM 162 (275)
T ss_dssp CCCSEEEEESCGGGSSC-HHHHHHHHHHHTTTCSEEEEEEECS
T ss_pred CCEEEEEEccchhhCCC-HHHHHHHHHHHhCCCCEEEEEEecC
Confidence 67999998642 22 2336677777776799999988765
No 186
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.69 E-value=1e-07 Score=101.21 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=85.5
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVC 968 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vi 968 (1057)
...++.+|||++||+|.+++.++. .+ .+|+++|+++.+++.+++| .. +++++++|+.+.++ ...||+|+
T Consensus 45 ~~~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~-----~~-~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 45 LLTPQTRVLEAGCGHGPDAARFGP-QA-ARWAAYDFSPELLKLARAN-----AP-HADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp HCCTTCEEEEESCTTSHHHHHHGG-GS-SEEEEEESCHHHHHHHHHH-----CT-TSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHH-cC-CEEEEEECCHHHHHHHHHh-----CC-CceEEEcchhhccCCcCCCCEEEEE
Confidence 356789999999999999999984 34 4799999999999999998 23 68999999976554 45799999
Q ss_pred ECCCCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 969 LGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 969 l~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
+++ .....+..+.++|+ +||+|+....... .+.+.+.+++.|+.
T Consensus 117 ~~~--~~~~~l~~~~~~Lk-pgG~l~~~~~~~~----------~~~~~~~l~~~Gf~ 160 (226)
T 3m33_A 117 SRR--GPTSVILRLPELAA-PDAHFLYVGPRLN----------VPEVPERLAAVGWD 160 (226)
T ss_dssp EES--CCSGGGGGHHHHEE-EEEEEEEEESSSC----------CTHHHHHHHHTTCE
T ss_pred eCC--CHHHHHHHHHHHcC-CCcEEEEeCCcCC----------HHHHHHHHHHCCCe
Confidence 984 45677888888998 6888872211111 12345566777875
No 187
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.69 E-value=5.6e-08 Score=101.66 Aligned_cols=108 Identities=14% Similarity=0.045 Sum_probs=83.9
Q ss_pred HHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccE
Q 036185 888 RMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANR 966 (1057)
Q Consensus 888 r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~ 966 (1057)
.+...+.++.+|||++||+|.+++.++ ..+..+|+++|+++.+++.+++++.. . .++.++.+|+.+.. +...||.
T Consensus 35 ~l~~~~~~~~~vLdiGcG~G~~~~~l~-~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~d~~~~~~~~~~fD~ 110 (215)
T 2pxx_A 35 LLEPELRPEDRILVLGCGNSALSYELF-LGGFPNVTSVDYSSVVVAAMQACYAH--V-PQLRWETMDVRKLDFPSASFDV 110 (215)
T ss_dssp HHGGGCCTTCCEEEETCTTCSHHHHHH-HTTCCCEEEEESCHHHHHHHHHHTTT--C-TTCEEEECCTTSCCSCSSCEEE
T ss_pred HHHHhcCCCCeEEEECCCCcHHHHHHH-HcCCCcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEcchhcCCCCCCcccE
Confidence 344456788999999999999999998 45555799999999999999999864 2 36899999998753 2457999
Q ss_pred EEECCCC-------------------CChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 967 VCLGLIP-------------------TSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 967 Vil~~~P-------------------~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|+++.+- .....+..+.++|+ +||++.+.++..
T Consensus 111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~ 162 (215)
T 2pxx_A 111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV-PGGRFISMTSAA 162 (215)
T ss_dssp EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE-EEEEEEEEESCC
T ss_pred EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc-CCCEEEEEeCCC
Confidence 9976411 11345777777887 799999988765
No 188
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.68 E-value=5.4e-08 Score=100.58 Aligned_cols=101 Identities=13% Similarity=0.004 Sum_probs=81.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++. .+. +|+++|+++.+++.++++++.+++. ++.++.+|+.+......||.|++...-
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~~~~D~v~~~~~l 107 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAA-NGY-DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTFDRQYDFILSTVVL 107 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCCCCCEEEEEEESCG
T ss_pred cCCCeEEEEcCCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCCCCCceEEEEcchh
Confidence 4678999999999999999984 444 7999999999999999999999986 599999999886545679999987521
Q ss_pred ------CChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 974 ------TSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 974 ------~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.....+..+.++|+ +||++++.+.
T Consensus 108 ~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~ 137 (199)
T 2xvm_A 108 MFLEAKTIPGLIANMQRCTK-PGGYNLIVAA 137 (199)
T ss_dssp GGSCGGGHHHHHHHHHHTEE-EEEEEEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcC-CCeEEEEEEe
Confidence 22345667777777 6998776554
No 189
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.68 E-value=3.9e-08 Score=110.19 Aligned_cols=105 Identities=15% Similarity=0.139 Sum_probs=83.6
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH-cC--CCc----cEEEEeCCccccCC-----CC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA-NS--VSD----HCIVLEGDNRFTAP-----KG 962 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~-N~--~~~----~v~~~~~D~~~~~~-----~~ 962 (1057)
++++|||+|+|.|+++..+++ .++.+|++||++|.+++.+++|+.. |+ +++ +++++.+|+++++. ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk-~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 578999999999999999884 4568899999999999999999752 32 332 79999999999885 46
Q ss_pred CccEEEECCCCC-C----------hhHHHHH----HHHhhCCCcEEEEEcccccc
Q 036185 963 VANRVCLGLIPT-S----------ENSWVTA----VQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 963 ~~D~Vil~~~P~-~----------~~~~~~a----~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
+||+||+|+ |. + ..++... .++|+ +||++.+..+++..
T Consensus 267 ~fDvII~D~-~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~-pgGilv~qs~s~~~ 319 (364)
T 2qfm_A 267 EFDYVINDL-TAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQGNCVNL 319 (364)
T ss_dssp CEEEEEEEC-CSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEEEEETTC
T ss_pred CceEEEECC-CCcccCcCchhhhHHHHHHHHHHHHHhhCC-CCcEEEEEcCCcch
Confidence 799999998 33 1 2344444 57777 79999999988765
No 190
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.68 E-value=7.2e-08 Score=107.86 Aligned_cols=106 Identities=12% Similarity=0.123 Sum_probs=84.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH-cC--C-CccEEEEeCCccccCC--CCCccEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA-NS--V-SDHCIVLEGDNRFTAP--KGVANRV 967 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~-N~--~-~~~v~~~~~D~~~~~~--~~~~D~V 967 (1057)
.++.+|||++||+|.++..+++..+..+|++||++|.+++.+++|+.. |+ + ..+++++.+|+.++++ ...||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 467899999999999999998544567899999999999999999864 32 3 3489999999998753 5679999
Q ss_pred EECCCCCC-----------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLIPTS-----------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~P~~-----------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++++.... ..++..+.++|+ +||++.+.....
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 198 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLN-PGGVMGMQTGMI 198 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEE-EEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcC-CCcEEEEEccCc
Confidence 99973221 356777888888 799998875543
No 191
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.67 E-value=5.8e-08 Score=103.00 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=83.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC-----CcEEEEEecCHHHHHHHHHHHHHcCC----CccEEEEeCCccccC----
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK-----ARLVYACEWNPCAVEALKHNLQANSV----SDHCIVLEGDNRFTA---- 959 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~-----a~~V~avD~n~~ai~~~~~N~~~N~~----~~~v~~~~~D~~~~~---- 959 (1057)
..++.+|||++||+|++++.++...+ ..+|+++|+++.+++.+++|++.+++ ..++.++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 56789999999999999999985443 24899999999999999999999883 347999999998854
Q ss_pred C-CCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 960 P-KGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 960 ~-~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
. ...||+|+++. +.. ..+..+.+.|+ +||+|++....
T Consensus 158 ~~~~~fD~I~~~~-~~~-~~~~~~~~~Lk-pgG~lv~~~~~ 195 (227)
T 2pbf_A 158 KELGLFDAIHVGA-SAS-ELPEILVDLLA-ENGKLIIPIEE 195 (227)
T ss_dssp HHHCCEEEEEECS-BBS-SCCHHHHHHEE-EEEEEEEEEEE
T ss_pred ccCCCcCEEEECC-chH-HHHHHHHHhcC-CCcEEEEEEcc
Confidence 2 45799999987 322 34566777887 69988887653
No 192
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.66 E-value=7.7e-08 Score=106.50 Aligned_cols=131 Identities=11% Similarity=0.049 Sum_probs=99.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++...++ +|+++|+++.+++.++++++.+++.+++.++.+|+.+.. +...||+|++..
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 367889999999999999999854355 799999999999999999999999878999999998864 256799999864
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEcccccch-----hHHHHHH-------HHHHHHHHHHhcCCc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNVKDSE-----EKLWAEH-------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~-----~~~~~~~-------~~~~i~~~~~~~g~~ 1025 (1057)
. |.....+..+.++|+ +||+|.+.+...... ...+... ..+.+.+++++.|+.
T Consensus 159 ~l~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 227 (297)
T 2o57_A 159 AFLHSPDKLKVFQECARVLK-PRGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLV 227 (297)
T ss_dssp CGGGCSCHHHHHHHHHHHEE-EEEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEE
T ss_pred hhhhcCCHHHHHHHHHHHcC-CCeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCe
Confidence 2 333566888888888 699999887654321 1111111 124567778888875
No 193
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.66 E-value=6.9e-09 Score=112.11 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=69.4
Q ss_pred CCC--CEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH-------HcC-CCccEEEEeCCccccCC--C
Q 036185 894 CKD--EVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ-------ANS-VSDHCIVLEGDNRFTAP--K 961 (1057)
Q Consensus 894 ~~g--~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~-------~N~-~~~~v~~~~~D~~~~~~--~ 961 (1057)
.+| .+|||+|||+|.+++.+|. .++ +|++||++|.+++.+++|++ .|+ +.++++++++|+.++++ .
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~-~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLAS-VGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHH-HTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 566 8999999999999999984 466 59999999987777766654 444 54589999999999875 2
Q ss_pred CCccEEEECCCCCChh----HHHHHHHHhhC
Q 036185 962 GVANRVCLGLIPTSEN----SWVTAVQALRS 988 (1057)
Q Consensus 962 ~~~D~Vil~~~P~~~~----~~~~a~~~l~~ 988 (1057)
..||+|++|| |.... .+...++.+++
T Consensus 163 ~~fDvV~lDP-~y~~~~~saavkk~~~~lr~ 192 (258)
T 2oyr_A 163 PRPQVVYLDP-MFPHKQKSALVKKEMRVFQS 192 (258)
T ss_dssp SCCSEEEECC-CCCCCCC-----HHHHHHHH
T ss_pred ccCCEEEEcC-CCCCcccchHHHHHHHHHHH
Confidence 3699999998 55422 24456677763
No 194
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.65 E-value=8.9e-08 Score=103.77 Aligned_cols=128 Identities=9% Similarity=0.008 Sum_probs=94.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++...+ .+|+++|+++.+++.+++++..+ .+++++++|+.+... ...||+|++..
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG-AHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFPENNFDLIYSRD 128 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCCTTCEEEEEEES
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC-CEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCCCCcEEEEeHHH
Confidence 35788999999999999999985434 47999999999999999987665 479999999988643 56899999874
Q ss_pred CCC------ChhHHHHHHHHhhCCCcEEEEEcccccc--hhHHHHHH----------HHHHHHHHHHhcCCc
Q 036185 972 IPT------SENSWVTAVQALRSEGGTLHVHGNVKDS--EEKLWAEH----------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P~------~~~~~~~a~~~l~~~gg~l~~~~~~~~~--~~~~~~~~----------~~~~i~~~~~~~g~~ 1025 (1057)
.-+ ....+..+.++|+ +||++.+.+..... ........ ..+.+.+++++.|+.
T Consensus 129 ~l~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 199 (266)
T 3ujc_A 129 AILALSLENKNKLFQKCYKWLK-PTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFK 199 (266)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCE
T ss_pred HHHhcChHHHHHHHHHHHHHcC-CCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCe
Confidence 322 2344677777887 79999998875543 11111111 134677888888875
No 195
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.65 E-value=1.6e-07 Score=96.33 Aligned_cols=121 Identities=14% Similarity=0.092 Sum_probs=87.5
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEE
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRV 967 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~V 967 (1057)
+...+.++.+|||++||.|.+++.++. .+ .+|+++|+++.+++.+++|+. ++.++++|+.+.. +...||+|
T Consensus 40 l~~~~~~~~~vLdiG~G~G~~~~~l~~-~~-~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~~~D~i 111 (195)
T 3cgg_A 40 IDAMAPRGAKILDAGCGQGRIGGYLSK-QG-HDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQISETDFDLI 111 (195)
T ss_dssp HHHHSCTTCEEEEETCTTTHHHHHHHH-TT-CEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSCCCCCCEEEE
T ss_pred HHHhccCCCeEEEECCCCCHHHHHHHH-CC-CcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCCCCCCceeEE
Confidence 333467889999999999999999984 44 479999999999999998862 4789999998753 34679999
Q ss_pred EECC-CC-CC-----hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 968 CLGL-IP-TS-----ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 968 il~~-~P-~~-----~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
++++ .- +. ...+..+.++|+ +||++++.......- ..+.+.+.+++.|+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~~~~l~-~~G~l~~~~~~~~~~-------~~~~~~~~l~~~Gf~ 168 (195)
T 3cgg_A 112 VSAGNVMGFLAEDGREPALANIHRALG-ADGRAVIGFGAGRGW-------VFGDFLEVAERVGLE 168 (195)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEETTSSC-------CHHHHHHHHHHHTEE
T ss_pred EECCcHHhhcChHHHHHHHHHHHHHhC-CCCEEEEEeCCCCCc-------CHHHHHHHHHHcCCE
Confidence 9973 11 11 345667777777 699888765543210 023455666677764
No 196
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.65 E-value=1.2e-07 Score=101.49 Aligned_cols=131 Identities=8% Similarity=0.033 Sum_probs=94.4
Q ss_pred HHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccE
Q 036185 888 RMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANR 966 (1057)
Q Consensus 888 r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~ 966 (1057)
.+...+.++.+|||++||+|.++..++. .++ +|+++|+++.+++.+++++ ...++.++++|+.+... ...||+
T Consensus 46 ~l~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~-~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~~~~~~fD~ 119 (242)
T 3l8d_A 46 FFEQYVKKEAEVLDVGCGDGYGTYKLSR-TGY-KAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLPFENEQFEA 119 (242)
T ss_dssp HHHHHSCTTCEEEEETCTTSHHHHHHHH-TTC-EEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCSSCTTCEEE
T ss_pred HHHHHcCCCCeEEEEcCCCCHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCCCCCCCccE
Confidence 3444467889999999999999999984 444 7999999999999999875 22479999999988643 568999
Q ss_pred EEECCC----CCChhHHHHHHHHhhCCCcEEEEEcccccchhHH--HHH----------HHHHHHHHHHHhcCCc
Q 036185 967 VCLGLI----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKL--WAE----------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 967 Vil~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~--~~~----------~~~~~i~~~~~~~g~~ 1025 (1057)
|++... |.....+..+.++|+ +||++++........... +.. ...+.+.+++++.|+.
T Consensus 120 v~~~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 120 IMAINSLEWTEEPLRALNEIKRVLK-SDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp EEEESCTTSSSCHHHHHHHHHHHEE-EEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred EEEcChHhhccCHHHHHHHHHHHhC-CCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCE
Confidence 988542 333566888888888 699998887544321110 000 0123577788888875
No 197
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.64 E-value=5.3e-08 Score=103.24 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=84.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCC----CccEEEEeCCccccCC-CCCccE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSV----SDHCIVLEGDNRFTAP-KGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~----~~~v~~~~~D~~~~~~-~~~~D~ 966 (1057)
..++.+|||++||+|++++.++...+. .+|+++|+++.+++.+++|++.+++ .+++.++.+|+..... ...||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 567899999999999999999854443 4899999999999999999998875 3479999999986543 457999
Q ss_pred EEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 967 VCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 967 Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|+++. +. ...+..+.+.|+ +||+|++..+..
T Consensus 155 i~~~~-~~-~~~~~~~~~~Lk-pgG~lv~~~~~~ 185 (226)
T 1i1n_A 155 IHVGA-AA-PVVPQALIDQLK-PGGRLILPVGPA 185 (226)
T ss_dssp EEECS-BB-SSCCHHHHHTEE-EEEEEEEEESCT
T ss_pred EEECC-ch-HHHHHHHHHhcC-CCcEEEEEEecC
Confidence 99987 32 334567777887 699988876653
No 198
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.64 E-value=2.4e-07 Score=96.18 Aligned_cols=107 Identities=14% Similarity=0.066 Sum_probs=83.9
Q ss_pred HHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccE
Q 036185 888 RMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANR 966 (1057)
Q Consensus 888 r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~ 966 (1057)
.++..+.++ +|||++||+|.+++.++ ..++ +|+++|+++.+++.+++++..+++ ++.++++|+.+.. +...||.
T Consensus 23 ~~~~~~~~~-~vLdiGcG~G~~~~~l~-~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~ 97 (202)
T 2kw5_A 23 SVANQIPQG-KILCLAEGEGRNACFLA-SLGY-EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIVADAWEG 97 (202)
T ss_dssp HHHHHSCSS-EEEECCCSCTHHHHHHH-TTTC-EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCCTTTCSE
T ss_pred HHHHhCCCC-CEEEECCCCCHhHHHHH-hCCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCCcCCccE
Confidence 344455677 99999999999999988 3444 799999999999999999998887 5999999998764 3467999
Q ss_pred EEECCCCCC-----hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 967 VCLGLIPTS-----ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 967 Vil~~~P~~-----~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
|++.. .+. ...+..+.++|+ +||++.+......
T Consensus 98 v~~~~-~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 98 IVSIF-CHLPSSLRQQLYPKVYQGLK-PGGVFILEGFAPE 135 (202)
T ss_dssp EEEEC-CCCCHHHHHHHHHHHHTTCC-SSEEEEEEEECTT
T ss_pred EEEEh-hcCCHHHHHHHHHHHHHhcC-CCcEEEEEEeccc
Confidence 99875 333 234555666666 7999998876543
No 199
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.64 E-value=9.2e-08 Score=106.11 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=84.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHh-CCCcEEEEEecCHHHHHHHHHHHHHc-CCCccEEEEeCCccccCC-C------CCc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVR-AKARLVYACEWNPCAVEALKHNLQAN-SVSDHCIVLEGDNRFTAP-K------GVA 964 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~-~~a~~V~avD~n~~ai~~~~~N~~~N-~~~~~v~~~~~D~~~~~~-~------~~~ 964 (1057)
.++.+|||++||+|.+++.++.. ....+|+|+|+++.+++.++++++.+ +...++.++++|+.+... . ..|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 57899999999999999999854 36678999999999999999999987 445589999999987542 3 579
Q ss_pred cEEEECCCCC---ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 965 NRVCLGLIPT---SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 965 D~Vil~~~P~---~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|+|++...-+ ....+..+.++|+ +||+|.+.++.
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~ 151 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLR-KDGTIAIWGYA 151 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEE-EEEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcC-CCcEEEEEecC
Confidence 9999875322 2556777888888 69999885554
No 200
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.63 E-value=1.7e-07 Score=99.38 Aligned_cols=131 Identities=14% Similarity=0.018 Sum_probs=94.0
Q ss_pred hhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEE
Q 036185 890 ARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCL 969 (1057)
Q Consensus 890 ~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil 969 (1057)
+..+..-.+|||++||.|+|+++++......+|+|+|+|+.+++.+++|+..||+. ..+...|.....+...+|+|++
T Consensus 127 ~~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p~~~~DvaL~ 204 (281)
T 3lcv_B 127 FRHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRLDEPADVTLL 204 (281)
T ss_dssp GGGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCCCSCCSEEEE
T ss_pred HhccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCCCCCcchHHH
Confidence 33445577999999999999999985446778999999999999999999999996 6888999888777788999988
Q ss_pred CCCCCC-----hhHHHHHHHHhhCCCcEEEEEcccc----cchhHHHHHHHHHHHHHHHHhcCCce
Q 036185 970 GLIPTS-----ENSWVTAVQALRSEGGTLHVHGNVK----DSEEKLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 970 ~~~P~~-----~~~~~~a~~~l~~~gg~l~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
+..-+. ....-..+..|+ ++|+++...... ...++.. -.+..++.+.+.|..+
T Consensus 205 lkti~~Le~q~kg~g~~ll~aL~-~~~vvVSfp~ksl~Grs~gm~~~---Y~~~~e~~~~~~g~~~ 266 (281)
T 3lcv_B 205 LKTLPCLETQQRGSGWEVIDIVN-SPNIVVTFPTKSLGQRSKGMFQN---YSQSFESQARERSCRI 266 (281)
T ss_dssp TTCHHHHHHHSTTHHHHHHHHSS-CSEEEEEEECC-------CHHHH---HHHHHHHHHHHHTCCE
T ss_pred HHHHHHhhhhhhHHHHHHHHHhC-CCCEEEeccchhhcCCCcchhhH---HHHHHHHHHHhcCCce
Confidence 762211 111226777777 688777776621 1122222 2345666666677643
No 201
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.63 E-value=4.8e-08 Score=106.38 Aligned_cols=130 Identities=13% Similarity=0.117 Sum_probs=88.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcC--C--------------------------C
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANS--V--------------------------S 945 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~--~--------------------------~ 945 (1057)
.+|.+|||++||+|.+++.++ ..++.+|+|+|+++.+++.++++++.+. + .
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~-~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAA-CDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTG-GGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHH-HhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 467899999999999988766 5677789999999999999999987653 1 1
Q ss_pred ccEE-EEeCCccccCC-----CCCccEEEECCC-----CCC---hhHHHHHHHHhhCCCcEEEEEcccccchh--H--HH
Q 036185 946 DHCI-VLEGDNRFTAP-----KGVANRVCLGLI-----PTS---ENSWVTAVQALRSEGGTLHVHGNVKDSEE--K--LW 1007 (1057)
Q Consensus 946 ~~v~-~~~~D~~~~~~-----~~~~D~Vil~~~-----P~~---~~~~~~a~~~l~~~gg~l~~~~~~~~~~~--~--~~ 1007 (1057)
.++. ++++|+.+..+ ...||+|++... |+. ...+....++|+ +||++++......... . .+
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK-PGG~li~~~~~~~~~~~~g~~~~ 211 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK-PGGHLVTTVTLRLPSYMVGKREF 211 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESSCCEEEETTEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC-CCcEEEEEEeecCccceeCCeEe
Confidence 1344 89999987432 357999999742 221 244566666777 7999999864332100 0 00
Q ss_pred HH--HHHHHHHHHHHhcCCc
Q 036185 1008 AE--HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 1008 ~~--~~~~~i~~~~~~~g~~ 1025 (1057)
.. --.+.+.+++++.|+.
T Consensus 212 ~~~~~~~~~l~~~l~~aGF~ 231 (263)
T 2a14_A 212 SCVALEKGEVEQAVLDAGFD 231 (263)
T ss_dssp ECCCCCHHHHHHHHHHTTEE
T ss_pred eccccCHHHHHHHHHHCCCE
Confidence 00 0134567777888875
No 202
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.63 E-value=5.7e-08 Score=102.11 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=80.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC-
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI- 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~- 972 (1057)
.++.+|||++||+|.++..++. .+ .+|+++|+++.+++.+++++..++ ++.++++|+.+..+...||+|+++..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~~~~fD~v~~~~~l 124 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAP-HC-KRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFSTAELFDLIVVAEVL 124 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGG-GE-EEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCCSCCEEEEEEESCG
T ss_pred CCCCcEEEEcCCCCHHHHHHHH-cC-CEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCCCCCccEEEEccHH
Confidence 4577999999999999999983 33 579999999999999999987653 69999999998876678999999732
Q ss_pred ---CCC---hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 973 ---PTS---ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 973 ---P~~---~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|.. ...+..+.++|+ +||++++....
T Consensus 125 ~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 156 (216)
T 3ofk_A 125 YYLEDMTQMRTAIDNMVKMLA-PGGHLVFGSAR 156 (216)
T ss_dssp GGSSSHHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred HhCCCHHHHHHHHHHHHHHcC-CCCEEEEEecC
Confidence 222 244777777787 69999886543
No 203
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.63 E-value=7e-08 Score=103.15 Aligned_cols=103 Identities=22% Similarity=0.173 Sum_probs=81.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|++++.+++..+ .+|+++|+++.+++.+++|++.+++. ++.++.+|+...++ ...||+|+++.
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGSKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcccCCCCCCCccEEEECC
Confidence 46788999999999999999985544 67999999999999999999999997 59999999854433 33599999986
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
... .....+.+.|+ +||+|++.....
T Consensus 167 ~~~--~~~~~~~~~L~-pgG~lvi~~~~~ 192 (235)
T 1jg1_A 167 GAP--KIPEPLIEQLK-IGGKLIIPVGSY 192 (235)
T ss_dssp BBS--SCCHHHHHTEE-EEEEEEEEECSS
T ss_pred cHH--HHHHHHHHhcC-CCcEEEEEEecC
Confidence 322 22345667777 699988876643
No 204
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.62 E-value=3.3e-08 Score=106.53 Aligned_cols=100 Identities=14% Similarity=0.146 Sum_probs=77.4
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccEEEE
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANRVCL 969 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~Vil 969 (1057)
++..+||+|+|+|.+++.++ .++.+++.||.+|.+++.+++|++. .+++++++.|+...+. ..++|+|++
T Consensus 91 n~~~~LDlfaGSGaLgiEaL--S~~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQL--RSQDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHS--CTTSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred cCCCceeEeCCcHHHHHHHc--CCCCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 35568999999999999998 4668999999999999999999975 3579999999887653 346999999
Q ss_pred CCCCCCh-hHHHHHHHHhh-----CCCcE-EEEEcccc
Q 036185 970 GLIPTSE-NSWVTAVQALR-----SEGGT-LHVHGNVK 1000 (1057)
Q Consensus 970 ~~~P~~~-~~~~~a~~~l~-----~~gg~-l~~~~~~~ 1000 (1057)
|| |+.. ..+..++..+. .++|+ +..|-...
T Consensus 166 DP-PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 166 DP-SYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp CC-CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred CC-CCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 99 8873 46666555442 34565 45555544
No 205
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.62 E-value=7.1e-08 Score=100.66 Aligned_cols=108 Identities=15% Similarity=0.049 Sum_probs=82.6
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEE
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRV 967 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~V 967 (1057)
.+....++.+|||++||.|.+++.+++..++ +|+++|+++.+++.++++++.++. ++.++++|+.+... ...||.|
T Consensus 17 ~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v 93 (209)
T 2p8j_A 17 YCNESNLDKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPFKDESMSFV 93 (209)
T ss_dssp HHHHSSSCSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCSCTTCEEEE
T ss_pred HHhccCCCCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCCCCCceeEE
Confidence 3344567899999999999997666544444 799999999999999999988774 58899999987543 4679999
Q ss_pred EECCC-CCC-----hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLI-PTS-----ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~-P~~-----~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++... .+. ...+..+.++|+ +||++.+..+..
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 131 (209)
T 2p8j_A 94 YSYGTIFHMRKNDVKEAIDEIKRVLK-PGGLACINFLTT 131 (209)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEET
T ss_pred EEcChHHhCCHHHHHHHHHHHHHHcC-CCcEEEEEEecc
Confidence 98642 221 344666777777 799998887754
No 206
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.62 E-value=1e-07 Score=101.87 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=81.7
Q ss_pred HHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEE
Q 036185 888 RMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRV 967 (1057)
Q Consensus 888 r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~V 967 (1057)
.+...+.++.+|||++||+|.+++.++. . .+|+++|+++.+++.+++++..++. ++.++++|+.+......||.|
T Consensus 26 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v 100 (243)
T 3d2l_A 26 WVLEQVEPGKRIADIGCGTGTATLLLAD-H--YEVTGVDLSEEMLEIAQEKAMETNR--HVDFWVQDMRELELPEPVDAI 100 (243)
T ss_dssp HHHHHSCTTCEEEEESCTTCHHHHHHTT-T--SEEEEEESCHHHHHHHHHHHHHTTC--CCEEEECCGGGCCCSSCEEEE
T ss_pred HHHHHcCCCCeEEEecCCCCHHHHHHhh-C--CeEEEEECCHHHHHHHHHhhhhcCC--ceEEEEcChhhcCCCCCcCEE
Confidence 4555667789999999999999999883 3 6899999999999999999998873 689999999887545679999
Q ss_pred EECC--CCCC------hhHHHHHHHHhhCCCcEEEEE
Q 036185 968 CLGL--IPTS------ENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 968 il~~--~P~~------~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
++.. +.+. ...+..+.++|+ +||++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~ 136 (243)
T 3d2l_A 101 TILCDSLNYLQTEADVKQTFDSAARLLT-DGGKLLFD 136 (243)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred EEeCCchhhcCCHHHHHHHHHHHHHhcC-CCeEEEEE
Confidence 9853 2221 234666777777 69988873
No 207
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.62 E-value=1.2e-07 Score=99.65 Aligned_cols=104 Identities=17% Similarity=0.154 Sum_probs=82.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~ 970 (1057)
..++.+|||++||+|.+++.++...+. .+|+++|+++.+++.+++++..+++. ++.++.+|+...++ ...||+|+++
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCCCCCCeeEEEEC
Confidence 467889999999999999999854432 58999999999999999999999987 59999999876554 4579999998
Q ss_pred CCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 971 LIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 971 ~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
..... ....+.+.|+ +||+|++.....
T Consensus 154 ~~~~~--~~~~~~~~L~-pgG~lv~~~~~~ 180 (215)
T 2yxe_A 154 AAGPK--IPEPLIRQLK-DGGKLLMPVGRY 180 (215)
T ss_dssp SBBSS--CCHHHHHTEE-EEEEEEEEESSS
T ss_pred CchHH--HHHHHHHHcC-CCcEEEEEECCC
Confidence 63221 2246677787 699888776543
No 208
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.62 E-value=7.2e-08 Score=107.06 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=64.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++++|||++||+|.+++.++ ..+.+|+|+|+++.+++.+++|++.+++. +++++++|+.++.. ..||.|++|+
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La--~~~~~v~~vDi~~~~~~~a~~~~~~~~~~-~v~~~~~D~~~~~~-~~~D~Vv~n~- 114 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLL--PLAKKVITIDIDSRMISEVKKRCLYEGYN-NLEVYEGDAIKTVF-PKFDVCTANI- 114 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHT--TTSSEEEEECSCHHHHHHHHHHHHHTTCC-CEEC----CCSSCC-CCCSEEEEEC-
T ss_pred CCCcCEEEEEcCcCcHHHHHHH--hcCCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECchhhCCc-ccCCEEEEcC-
Confidence 4678999999999999999998 33568999999999999999999998885 79999999988643 3799999998
Q ss_pred CCC
Q 036185 973 PTS 975 (1057)
Q Consensus 973 P~~ 975 (1057)
|..
T Consensus 115 py~ 117 (299)
T 2h1r_A 115 PYK 117 (299)
T ss_dssp CGG
T ss_pred Ccc
Confidence 754
No 209
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.62 E-value=2.9e-07 Score=92.72 Aligned_cols=98 Identities=19% Similarity=0.282 Sum_probs=77.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++. .+ .+|+++|+++.+++.++++ . .++.++.+| . ..+...||.|++...
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~-----~-~~v~~~~~d-~-~~~~~~~D~v~~~~~ 84 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLE-FA-TKLYCIDINVIALKEVKEK-----F-DSVITLSDP-K-EIPDNSVDFILFANS 84 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHT-TE-EEEEEECSCHHHHHHHHHH-----C-TTSEEESSG-G-GSCTTCEEEEEEESC
T ss_pred cCCCCeEEEECCCCCHHHHHHHh-hc-CeEEEEeCCHHHHHHHHHh-----C-CCcEEEeCC-C-CCCCCceEEEEEccc
Confidence 46788999999999999999983 33 4899999999999999998 3 378999999 2 234567999998653
Q ss_pred C----CChhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 973 P----TSENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 973 P----~~~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
- .....+..+.++|+ +||++.+.++...
T Consensus 85 l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 85 FHDMDDKQHVISEVKRILK-DDGRVIIIDWRKE 116 (170)
T ss_dssp STTCSCHHHHHHHHHHHEE-EEEEEEEEEECSS
T ss_pred hhcccCHHHHHHHHHHhcC-CCCEEEEEEcCcc
Confidence 2 23566778888888 6999999877654
No 210
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.61 E-value=3.7e-08 Score=115.69 Aligned_cols=104 Identities=17% Similarity=0.190 Sum_probs=83.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhC-------------CCcEEEEEecCHHHHHHHHHHHHHcCCCc-cEEEEeCCcccc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRA-------------KARLVYACEWNPCAVEALKHNLQANSVSD-HCIVLEGDNRFT 958 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~-------------~a~~V~avD~n~~ai~~~~~N~~~N~~~~-~v~~~~~D~~~~ 958 (1057)
...+.+|+|++||+|.|.+.++... ....++|+|+||.+++.++.|+.++++.. ++.++++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 3567899999999999999887432 22459999999999999999999999853 578899999876
Q ss_pred CCCCCccEEEECCCCCCh----------------------hHHHHHHHHhhCCCcEEEEEcc
Q 036185 959 APKGVANRVCLGLIPTSE----------------------NSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 959 ~~~~~~D~Vil~~~P~~~----------------------~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.....||.|+.|| |... .++..+++.|+ +||.+.+...
T Consensus 249 ~~~~~fD~Iv~NP-Pf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~gG~~a~V~p 308 (445)
T 2okc_A 249 EPSTLVDVILANP-PFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK-TGGRAAVVLP 308 (445)
T ss_dssp CCSSCEEEEEECC-CSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred cccCCcCEEEECC-CCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc-cCCEEEEEEC
Confidence 5555899999999 7542 45777888888 6887766653
No 211
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.61 E-value=1.5e-07 Score=99.02 Aligned_cols=130 Identities=16% Similarity=0.152 Sum_probs=88.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHH----HHcCCCccEEEEeCCccccCCC-CCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNL----QANSVSDHCIVLEGDNRFTAPK-GVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~----~~N~~~~~v~~~~~D~~~~~~~-~~~D~V 967 (1057)
..++.+|||++||+|.+++.++......+|+|+|+++.+++.+.+++ ..+++. +++++++|+.+.... .. |.|
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTCCSCCCE-EEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhCCCCCCC-CEE
Confidence 46788999999999999999985543668999999999888654444 446665 799999999985432 33 777
Q ss_pred EECCC---------CCChhHHHHHHHHhhCCCcEEEEEcccccc-----hhH----HHHHHHHHHHHHHHHhcCCc
Q 036185 968 CLGLI---------PTSENSWVTAVQALRSEGGTLHVHGNVKDS-----EEK----LWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 968 il~~~---------P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~-----~~~----~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
++... |.....+..+.++|+ +||++.+....... +.. .....+.+.+...+++.|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCR-PGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWK 177 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEE-EEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEE
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcC-CCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCC
Confidence 65541 222456778888888 69988885332210 000 01122344577788888875
No 212
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.61 E-value=1.9e-07 Score=99.93 Aligned_cols=100 Identities=12% Similarity=0.007 Sum_probs=80.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++ ..+. +|+++|+++.+++.+++++.. ++.++++|+.+..+...||.|++...
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~-~~~~-~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~~~~fD~v~~~~~ 112 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQ-EHFN-DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQLPRRYDNIVLTHV 112 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHT-TTCS-CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCCSSCEEEEEEESC
T ss_pred hcCCCcEEEECCCCCHHHHHHH-HhCC-cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCcCCcccEEEEhhH
Confidence 3567899999999999999988 3444 699999999999999988643 58999999998866678999998532
Q ss_pred ----CCChhHHHHHH-HHhhCCCcEEEEEcccc
Q 036185 973 ----PTSENSWVTAV-QALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 973 ----P~~~~~~~~a~-~~l~~~gg~l~~~~~~~ 1000 (1057)
|.....+.++. ++|+ +||+|.+.....
T Consensus 113 l~~~~~~~~~l~~~~~~~Lk-pgG~l~i~~~~~ 144 (250)
T 2p7i_A 113 LEHIDDPVALLKRINDDWLA-EGGRLFLVCPNA 144 (250)
T ss_dssp GGGCSSHHHHHHHHHHTTEE-EEEEEEEEEECT
T ss_pred HHhhcCHHHHHHHHHHHhcC-CCCEEEEEcCCh
Confidence 34466788888 8888 699998877543
No 213
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.61 E-value=8.3e-08 Score=103.40 Aligned_cols=127 Identities=13% Similarity=0.046 Sum_probs=91.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGLI 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~~ 972 (1057)
.++.+|||++||+|.++..++. .+..+|+++|+++.+++.+++++..+ .++.++++|+.+... ...||+|++...
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 167 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLT-KLYATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLPPNTYDLIVIQWT 167 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHH-HHCSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCCSSCEEEEEEESC
T ss_pred cCCCEEEEECCCcCHHHHHHHH-hhcCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCCCCCeEEEEEcch
Confidence 4678999999999999999884 44667999999999999999998765 379999999987643 457999998653
Q ss_pred CC------ChhHHHHHHHHhhCCCcEEEEEcccccchh------HHHHHHHHHHHHHHHHhcCCc
Q 036185 973 PT------SENSWVTAVQALRSEGGTLHVHGNVKDSEE------KLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 P~------~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
-+ ....+..+.++|+ +||++++.++...... ........+.+.+++++.|+.
T Consensus 168 l~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 168 AIYLTDADFVKFFKHCQQALT-PNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCC
T ss_pred hhhCCHHHHHHHHHHHHHhcC-CCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCE
Confidence 11 2345677777887 6999998875321100 000000124567777888875
No 214
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.60 E-value=4.9e-07 Score=103.55 Aligned_cols=102 Identities=23% Similarity=0.224 Sum_probs=83.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++......+++++|+ |.+++.+++|+..+++.++++++.+|..+.++. .||+|++...-
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPV-TADVVLLSFVL 258 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-CEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCC-CCCEEEEeccc
Confidence 5678999999999999999985543457999999 999999999999999987899999999875553 39999986533
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
+. ...+..+.++|+ +||+|++.+.
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALE-PGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEE-EEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcC-CCcEEEEEec
Confidence 21 245777777887 6999988877
No 215
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.60 E-value=4.8e-08 Score=103.81 Aligned_cols=103 Identities=24% Similarity=0.296 Sum_probs=82.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC------cEEEEEecCHHHHHHHHHHHHHcC-----CCccEEEEeCCccccCCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA------RLVYACEWNPCAVEALKHNLQANS-----VSDHCIVLEGDNRFTAPK 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a------~~V~avD~n~~ai~~~~~N~~~N~-----~~~~v~~~~~D~~~~~~~ 961 (1057)
..++.+|||++||+|+++..++...+. .+|+++|+++.+++.+++|++.++ .. ++.++.+|+.+.++.
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~-~v~~~~~d~~~~~~~ 160 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSG-QLLIVEGDGRKGYPP 160 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHT-SEEEEESCGGGCCGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCC-ceEEEECCcccCCCc
Confidence 567899999999999999999854443 479999999999999999998877 44 799999999885543
Q ss_pred -CCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 962 -GVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 962 -~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
..||+|+++. +. ......+.+.|+ +||+|++....
T Consensus 161 ~~~fD~I~~~~-~~-~~~~~~~~~~Lk-pgG~lvi~~~~ 196 (227)
T 1r18_A 161 NAPYNAIHVGA-AA-PDTPTELINQLA-SGGRLIVPVGP 196 (227)
T ss_dssp GCSEEEEEECS-CB-SSCCHHHHHTEE-EEEEEEEEESC
T ss_pred CCCccEEEECC-ch-HHHHHHHHHHhc-CCCEEEEEEec
Confidence 6799999986 32 223466677787 69998887654
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.59 E-value=1.5e-07 Score=104.32 Aligned_cols=101 Identities=11% Similarity=0.039 Sum_probs=82.1
Q ss_pred EEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---CCCccEEEECCCCC
Q 036185 898 VIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---KGVANRVCLGLIPT 974 (1057)
Q Consensus 898 ~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---~~~~D~Vil~~~P~ 974 (1057)
+|||++||.|.++..+++.....+|++||++|.+++.+++++..+. ..+++++.+|+++++. ...||+|++|....
T Consensus 92 rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred EEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 9999999999999999853444479999999999999999987654 3489999999998863 46799999986221
Q ss_pred --------ChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 975 --------SENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 975 --------~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
...++..+.++|+ +||++.+....+
T Consensus 171 ~~~~~~L~t~efl~~~~r~Lk-pgGvlv~~~~~~ 203 (317)
T 3gjy_A 171 AITPQNFTTVEFFEHCHRGLA-PGGLYVANCGDH 203 (317)
T ss_dssp SCCCGGGSBHHHHHHHHHHEE-EEEEEEEEEEEC
T ss_pred cccchhhhHHHHHHHHHHhcC-CCcEEEEEecCC
Confidence 1466888888888 799998887654
No 217
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.58 E-value=1.8e-07 Score=103.08 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=84.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcC--C-CccEEEEeCCccccCC--CCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANS--V-SDHCIVLEGDNRFTAP--KGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~--~-~~~v~~~~~D~~~~~~--~~~~D~Vi 968 (1057)
.++.+|||++||.|.++..+++..+..+|++||++|.+++.+++++..++ + ..+++++.+|+.++++ ...||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 46789999999999999999854446789999999999999999986543 2 3479999999988763 46799999
Q ss_pred ECCCCCC---------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLIPTS---------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~P~~---------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+|+ +.. ..++..+.++|+ +||++.+.....
T Consensus 157 ~d~-~~~~~~~~~l~~~~~l~~~~~~L~-pgG~lv~~~~~~ 195 (283)
T 2i7c_A 157 VDS-SDPIGPAETLFNQNFYEKIYNALK-PNGYCVAQCESL 195 (283)
T ss_dssp EEC-CCTTTGGGGGSSHHHHHHHHHHEE-EEEEEEEECCCT
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHHhcC-CCcEEEEECCCc
Confidence 986 321 366777788888 799999886543
No 218
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.58 E-value=3.6e-07 Score=94.48 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=71.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--------C---
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--------K--- 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--------~--- 961 (1057)
+.+|.+|||++||+|.+++.++. . ..+|+|+|++|.+ .+. ++.++++|+.+... .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~-~-~~~V~gvD~~~~~-----------~~~-~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNS-L-ARKIISIDLQEME-----------EIA-GVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTT-T-CSEEEEEESSCCC-----------CCT-TCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHH-c-CCcEEEEeccccc-----------cCC-CeEEEEccccCHHHHHHHHHHhhccc
Confidence 57899999999999999999984 3 5579999999852 233 68999999877421 1
Q ss_pred -CCccEEEECCCCCC---------------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 962 -GVANRVCLGLIPTS---------------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 962 -~~~D~Vil~~~P~~---------------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
..||+|+.|+.|.. ...+..+.++|+ +||.+.+-.+...
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lk-pGG~lv~k~~~~~ 143 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLR-NGGNVLLKQFQGD 143 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECST
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEcCCC
Confidence 37999999986643 123556677787 7999998877654
No 219
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.57 E-value=3.2e-07 Score=95.32 Aligned_cols=121 Identities=15% Similarity=0.040 Sum_probs=87.3
Q ss_pred CCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECCC--
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGLI-- 972 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~~-- 972 (1057)
+.+|||++||+|.++..++. .++ +|+++|+++.+++.++++ .. ++.++++|+.+.. +...||+|++...
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~-----~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 113 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLAS-LGH-QIEGLEPATRLVELARQT-----HP-SVTFHHGTITDLSDSPKRWAGLLAWYSLI 113 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHH-TTC-CEEEECCCHHHHHHHHHH-----CT-TSEEECCCGGGGGGSCCCEEEEEEESSST
T ss_pred CCeEEEecCCCCHHHHHHHh-cCC-eEEEEeCCHHHHHHHHHh-----CC-CCeEEeCcccccccCCCCeEEEEehhhHh
Confidence 78999999999999999983 455 699999999999999987 22 6899999998864 3568999998542
Q ss_pred --C--CChhHHHHHHHHhhCCCcEEEEEcccccchhH------HHHHHHHHHHHHHHHhcCCc
Q 036185 973 --P--TSENSWVTAVQALRSEGGTLHVHGNVKDSEEK------LWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 --P--~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~------~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
| .....+..+.++|+ +||++++..+....... .......+.+.+++++.|+.
T Consensus 114 ~~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 114 HMGPGELPDALVALRMAVE-DGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp TCCTTTHHHHHHHHHHTEE-EEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred cCCHHHHHHHHHHHHHHcC-CCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCc
Confidence 2 22455777777887 69999888765432000 00000134567778888875
No 220
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.57 E-value=4.8e-08 Score=103.86 Aligned_cols=100 Identities=10% Similarity=0.127 Sum_probs=77.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHH----HHHHHHHHHcCCCccEEEEeCCccccCC--CCCccE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAV----EALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai----~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~ 966 (1057)
..++++|||++||+|.+++.+|+......|+|+|++|.++ +.++++++.+++. ++.++++|+.++.. ...+|.
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGGTTCEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhccCeEEE
Confidence 4678899999999999999988545566899999995555 5559999999987 69999999988732 245677
Q ss_pred EEECCCCCC----------hhHHHHHHHHhhCCCcEEEE
Q 036185 967 VCLGLIPTS----------ENSWVTAVQALRSEGGTLHV 995 (1057)
Q Consensus 967 Vil~~~P~~----------~~~~~~a~~~l~~~gg~l~~ 995 (1057)
|.+++ |.. ...+.+..++|+ +||.+++
T Consensus 101 i~~~~-~~~~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~i 137 (225)
T 3p2e_A 101 ISILF-PWGTLLEYVIKPNRDILSNVADLAK-KEAHFEF 137 (225)
T ss_dssp EEEES-CCHHHHHHHHTTCHHHHHHHHTTEE-EEEEEEE
T ss_pred EEEeC-CCcHHhhhhhcchHHHHHHHHHhcC-CCcEEEE
Confidence 77776 432 234667777787 7999888
No 221
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.57 E-value=1.7e-07 Score=100.92 Aligned_cols=98 Identities=17% Similarity=0.167 Sum_probs=78.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC--
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL-- 971 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~-- 971 (1057)
.++.+|||++||+|.+++.++. .++ +|+++|+++.+++.+++|+..+++ ++.++++|+.+......||.|++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~-~~~-~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~fD~v~~~~~~ 115 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAFKNEFDAVTMFFST 115 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCCCSCEEEEEECSSG
T ss_pred cCCCEEEEeCCCCCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhcccCCCccEEEEcCCc
Confidence 4678999999999999999983 454 799999999999999999998887 5899999999875556799999742
Q ss_pred CCCC-----hhHHHHHHHHhhCCCcEEEEE
Q 036185 972 IPTS-----ENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 972 ~P~~-----~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
++.. ...+..+.++|+ +||++.+.
T Consensus 116 ~~~~~~~~~~~~l~~~~~~L~-pgG~li~~ 144 (252)
T 1wzn_A 116 IMYFDEEDLRKLFSKVAEALK-PGGVFITD 144 (252)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE-EEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcC-CCeEEEEe
Confidence 1221 344666677777 69988764
No 222
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.55 E-value=5.3e-07 Score=101.54 Aligned_cols=130 Identities=15% Similarity=0.149 Sum_probs=96.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++......+++++|++ .+++.+++++..+++.++++++.+|..+......||+|++..+.
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 56789999999999999999855444589999999 99999999999999987899999999875333349999995433
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcccccchh----HHHHHH-------------HHHHHHHHHHhcCCc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNVKDSEE----KLWAEH-------------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~----~~~~~~-------------~~~~i~~~~~~~g~~ 1025 (1057)
+. ...+..+.++|+ +||.|.+.+....... .....+ ..+.+.+++++.|+.
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALA-VEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEE-EEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred ccCCHHHHHHHHHHHHHhCC-CCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 32 245666777777 6998888877654211 000000 145677888889986
No 223
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.55 E-value=5e-07 Score=103.20 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=84.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---CCCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---APKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---~~~~~~D~Vil~ 970 (1057)
.+..+|||++||+|.+++.++++....+|+++|+ |.+++.+++++...++.++++++.+|.++. ++ ..||.|++.
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 4568999999999999999986544558999999 999999999999999878999999999985 33 579999985
Q ss_pred CCCCC------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 971 LIPTS------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 971 ~~P~~------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
..-+. ...+..+.++|+ +||.|.+.+....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIG-KDSKVYIMETLWD 291 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCC-TTCEEEEEECCTT
T ss_pred chhhhCCHHHHHHHHHHHHHhcC-CCcEEEEEeeccC
Confidence 43331 244667777787 7999988876543
No 224
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.54 E-value=9.6e-08 Score=105.29 Aligned_cols=107 Identities=17% Similarity=0.127 Sum_probs=70.7
Q ss_pred EEEeCCEEEEEecceeEeeCCCHHHHHHHhhc--cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHH
Q 036185 861 KHCENGILYSFDATKCMFSWGNLSEKLRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHN 938 (1057)
Q Consensus 861 ~~~e~gi~~~~d~~~~~f~~~~~~er~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N 938 (1057)
...++|++.+-.+..-|....+.. .++++. ..++++|||++||+|+++..++.. +.+|+|+|+++.+++.++++
T Consensus 16 ~~~~~~~~~~k~~GQnfL~d~~i~--~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~ 91 (295)
T 3gru_A 16 PRGSHMFKPKKKLGQCFLIDKNFV--NKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKL 91 (295)
T ss_dssp --------------CCEECCHHHH--HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHH
T ss_pred hhHhcCCCCccccCccccCCHHHH--HHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHH
Confidence 344555554444433333333333 334443 467899999999999999999843 56899999999999999999
Q ss_pred HHHcCCCccEEEEeCCccccCC-CCCccEEEECCCCCC
Q 036185 939 LQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGLIPTS 975 (1057)
Q Consensus 939 ~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~~P~~ 975 (1057)
+.. .. +++++++|+.++.. ...||.|+.|+ |+.
T Consensus 92 ~~~--~~-~v~vi~gD~l~~~~~~~~fD~Iv~Nl-Py~ 125 (295)
T 3gru_A 92 KEL--YN-NIEIIWGDALKVDLNKLDFNKVVANL-PYQ 125 (295)
T ss_dssp HHH--CS-SEEEEESCTTTSCGGGSCCSEEEEEC-CGG
T ss_pred hcc--CC-CeEEEECchhhCCcccCCccEEEEeC-ccc
Confidence 873 33 79999999987543 34699999998 764
No 225
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.54 E-value=5.8e-08 Score=105.54 Aligned_cols=100 Identities=3% Similarity=-0.142 Sum_probs=82.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH--cCC-CccEEEEeCCccccCCCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA--NSV-SDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~--N~~-~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
..+++|||++||+|+++..+++. + .+|++||++|.+++.+++++.. +++ +.+++++.+|+.+++ ..||+|+++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCL 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEES
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEEC
Confidence 45689999999999999998855 6 7899999999999999987643 222 247999999999987 679999999
Q ss_pred CCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 971 LIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 971 ~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
. +.+..++..+.+.|+ +||++.+....
T Consensus 147 ~-~dp~~~~~~~~~~L~-pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 Q-EPDIHRIDGLKRMLK-EDGVFISVAKH 173 (262)
T ss_dssp S-CCCHHHHHHHHTTEE-EEEEEEEEEEC
T ss_pred C-CChHHHHHHHHHhcC-CCcEEEEEcCC
Confidence 7 667777888888888 79999886443
No 226
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.54 E-value=2.2e-07 Score=100.74 Aligned_cols=102 Identities=11% Similarity=0.034 Sum_probs=79.5
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEE
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRV 967 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~V 967 (1057)
+......+.+|||++||+|.++..++ .. ..+|+|+|+++.+++.++++ .++.++++|+.+.. +...||.|
T Consensus 33 l~~~~~~~~~vLDvGcGtG~~~~~l~-~~-~~~v~gvD~s~~ml~~a~~~-------~~v~~~~~~~e~~~~~~~sfD~v 103 (257)
T 4hg2_A 33 LGEVAPARGDALDCGCGSGQASLGLA-EF-FERVHAVDPGEAQIRQALRH-------PRVTYAVAPAEDTGLPPASVDVA 103 (257)
T ss_dssp HHHHSSCSSEEEEESCTTTTTHHHHH-TT-CSEEEEEESCHHHHHTCCCC-------TTEEEEECCTTCCCCCSSCEEEE
T ss_pred HHHhcCCCCCEEEEcCCCCHHHHHHH-Hh-CCEEEEEeCcHHhhhhhhhc-------CCceeehhhhhhhcccCCcccEE
Confidence 33445567899999999999999988 33 45799999999999876531 36999999998864 35689999
Q ss_pred EECCCCC---ChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 968 CLGLIPT---SENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 968 il~~~P~---~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++...-+ ....+.++.++|+ +||+|.+.++..
T Consensus 104 ~~~~~~h~~~~~~~~~e~~rvLk-pgG~l~~~~~~~ 138 (257)
T 4hg2_A 104 IAAQAMHWFDLDRFWAELRRVAR-PGAVFAAVTYGL 138 (257)
T ss_dssp EECSCCTTCCHHHHHHHHHHHEE-EEEEEEEEEECC
T ss_pred EEeeehhHhhHHHHHHHHHHHcC-CCCEEEEEECCC
Confidence 9875322 2567888999998 799988877654
No 227
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.53 E-value=2.2e-07 Score=98.75 Aligned_cols=100 Identities=18% Similarity=0.196 Sum_probs=79.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++. .+ .+|+++|+++.+++.+++|+..++ ++.++++|+.+.++ ...||+|+++.
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~~~~~fD~v~~~~ 142 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAE-IV-DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYEEEKPYDRVVVWA 142 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHH-HS-SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCGGGCCEEEEEESS
T ss_pred CCCCCEEEEEcCCCCHHHHHHHH-Hc-CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccccCCCccEEEECC
Confidence 46788999999999999999984 34 689999999999999999998876 69999999987443 45799999986
Q ss_pred CCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
..+. ....+.+.|+ +||++.+.....
T Consensus 143 ~~~~--~~~~~~~~L~-pgG~l~~~~~~~ 168 (231)
T 1vbf_A 143 TAPT--LLCKPYEQLK-EGGIMILPIGVG 168 (231)
T ss_dssp BBSS--CCHHHHHTEE-EEEEEEEEECSS
T ss_pred cHHH--HHHHHHHHcC-CCcEEEEEEcCC
Confidence 3222 2245667777 799988876543
No 228
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.53 E-value=1.5e-06 Score=97.96 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=95.7
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPT 974 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~ 974 (1057)
++.+|||++||+|.++..++......+++++|+ |.+++.+++++...++.++++++.+|.++..+. .||+|++...-+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~-~~D~v~~~~vlh 246 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPA-GAGGYVLSAVLH 246 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-SCSEEEEESCGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCC-CCcEEEEehhhc
Confidence 357999999999999999986555557999999 999999999999999988999999999865554 799999854322
Q ss_pred ----C--hhHHHHHHHHhhCCCcEEEEEcccccchh-HHHHH-----------HHHHHHHHHHHhcCCc
Q 036185 975 ----S--ENSWVTAVQALRSEGGTLHVHGNVKDSEE-KLWAE-----------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 975 ----~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~-~~~~~-----------~~~~~i~~~~~~~g~~ 1025 (1057)
. ...+..+.++|+ +||.|.+.+....... ....+ ...+.+.+++++.|+.
T Consensus 247 ~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 314 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAG-SGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLA 314 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHT-TTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEE
T ss_pred cCCHHHHHHHHHHHHHhcC-CCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCE
Confidence 1 445777778887 7999999887654320 00000 1134677888888864
No 229
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.52 E-value=1.7e-07 Score=101.67 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=76.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC-
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL- 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~- 971 (1057)
..++.+|||++||+|.++..++ ..+ .+|+++|+++.+++.+++++. ++.++++|+.+......||.|++..
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~-~~~-~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~~~~fD~v~~~~~ 119 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLA-DSF-GTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSLGRRFSAVTCMFS 119 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHT-TTS-SEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCCSCCEEEEEECTT
T ss_pred CCCCCcEEEeCCcCCHHHHHHH-HcC-CeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCccCCcCEEEEcCc
Confidence 4567899999999999999988 334 479999999999999999753 5889999999876567899999874
Q ss_pred ----CCCC---hhHHHHHHHHhhCCCcEEEEEc
Q 036185 972 ----IPTS---ENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 972 ----~P~~---~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
+|.. ...+..+.++|+ +||+|.+..
T Consensus 120 ~l~~~~~~~~~~~~l~~~~~~L~-pgG~l~i~~ 151 (263)
T 3pfg_A 120 SIGHLAGQAELDAALERFAAHVL-PDGVVVVEP 151 (263)
T ss_dssp GGGGSCHHHHHHHHHHHHHHTEE-EEEEEEECC
T ss_pred hhhhcCCHHHHHHHHHHHHHhcC-CCcEEEEEe
Confidence 2211 234667777777 799998853
No 230
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.52 E-value=5e-08 Score=101.95 Aligned_cols=103 Identities=12% Similarity=-0.012 Sum_probs=75.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcC-----------CCccEEEEeCCccccCCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANS-----------VSDHCIVLEGDNRFTAPK 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~-----------~~~~v~~~~~D~~~~~~~ 961 (1057)
+.++.+|||++||+|.+++.+|. .|. +|+|+|+++.|++.+++++..+. ...+++++++|+.+....
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~-~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHH-CCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 35788999999999999999984 455 79999999999999998865421 023689999999887542
Q ss_pred --CCccEEEECC----CCCC--hhHHHHHHHHhhCCCcE--EEEEcc
Q 036185 962 --GVANRVCLGL----IPTS--ENSWVTAVQALRSEGGT--LHVHGN 998 (1057)
Q Consensus 962 --~~~D~Vil~~----~P~~--~~~~~~a~~~l~~~gg~--l~~~~~ 998 (1057)
..||.|+... +|.. ...+....++|+ +||. +....+
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lk-pgG~~~l~~~~~ 143 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMP-QACSGLLITLEY 143 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC-SEEEEEEEEESS
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcC-CCcEEEEEEEec
Confidence 5799998632 1211 234667778887 6997 444443
No 231
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.51 E-value=1.2e-06 Score=96.08 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=84.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEE-eCCccccC----CCCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVL-EGDNRFTA----PKGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~-~~D~~~~~----~~~~~D~Vi 968 (1057)
.+|.+|||++||+|+|+..++ ..++.+|+|+|+++.+++.+.++ . .++..+ ..|++.+. +...||.|+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~-~~ga~~V~aVDvs~~mL~~a~r~----~--~rv~~~~~~ni~~l~~~~l~~~~fD~v~ 156 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVML-QNGAKLVYAVDVGTNQLVWKLRQ----D--DRVRSMEQYNFRYAEPVDFTEGLPSFAS 156 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHH-HTTCSEEEEECSSSSCSCHHHHT----C--TTEEEECSCCGGGCCGGGCTTCCCSEEE
T ss_pred ccccEEEecCCCccHHHHHHH-hCCCCEEEEEECCHHHHHHHHHh----C--cccceecccCceecchhhCCCCCCCEEE
Confidence 468899999999999999887 46888999999999999885442 1 134333 23443322 233489999
Q ss_pred ECCCCCC-hhHHHHHHHHhhCCCcEEEEE---cccccchh---------HHHHHHHHHHHHHHHHhcCCce
Q 036185 969 LGLIPTS-ENSWVTAVQALRSEGGTLHVH---GNVKDSEE---------KLWAEHVSKSIYEIARSEGHRW 1026 (1057)
Q Consensus 969 l~~~P~~-~~~~~~a~~~l~~~gg~l~~~---~~~~~~~~---------~~~~~~~~~~i~~~~~~~g~~~ 1026 (1057)
++..-.+ ...+.+..++|+ +||.+.+- .|....+. ...+....+.+.+++.+.|+.+
T Consensus 157 ~d~sf~sl~~vL~e~~rvLk-pGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v 226 (291)
T 3hp7_A 157 IDVSFISLNLILPALAKILV-DGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSV 226 (291)
T ss_dssp ECCSSSCGGGTHHHHHHHSC-TTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEE
T ss_pred EEeeHhhHHHHHHHHHHHcC-cCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 9874333 556888888888 68888776 33211110 1233456678888888998753
No 232
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.51 E-value=2e-07 Score=100.89 Aligned_cols=102 Identities=11% Similarity=0.064 Sum_probs=70.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcc-ccCCCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNR-FTAPKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~-~~~~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.+| ..+ .+|+|+|+++.+++.+++|+..+.+ ...+...+.. .......||.|+++.
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La-~~g-~~V~gvD~S~~ml~~Ar~~~~~~~v--~~~~~~~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKAL-ERG-ASVTVFDFSQRMCDDLAEALADRCV--TIDLLDITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHH-HTT-CEEEEEESCHHHHHHHHHHTSSSCC--EEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred CCCcCEEEEEeCcchHHHHHHH-hcC-CEEEEEECCHHHHHHHHHHHHhccc--eeeeeecccccccccCCCccEEEEhh
Confidence 4678999999999999999998 344 4799999999999999999876632 2333333330 001135799999975
Q ss_pred CCC-C-----hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 IPT-S-----ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 ~P~-~-----~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.-+ . ...+....++| +||.|++.....
T Consensus 119 ~l~~~~~~~~~~~l~~l~~lL--PGG~l~lS~~~g 151 (261)
T 3iv6_A 119 LINRFTTEEARRACLGMLSLV--GSGTVRASVKLG 151 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHH--TTSEEEEEEEBS
T ss_pred hhHhCCHHHHHHHHHHHHHhC--cCcEEEEEeccC
Confidence 321 1 22355555566 699998876543
No 233
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.50 E-value=1.8e-06 Score=98.84 Aligned_cols=129 Identities=19% Similarity=0.180 Sum_probs=96.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++++....+++++|+ |.+++.+++++...++.++++++.+|.++..+. .||+|++...-
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPD-GADVYLIKHVL 278 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCS-SCSEEEEESCG
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCC-CceEEEhhhhh
Confidence 4678999999999999999986544557999999 999999999999999988999999999865554 79999986433
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcccccchhHHH---HH-----------HHHHHHHHHHHhcCCc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLW---AE-----------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~---~~-----------~~~~~i~~~~~~~g~~ 1025 (1057)
+. ...+..+.++|+ +||.|.+.+.......... .+ ...+.+.+++++.|+.
T Consensus 279 h~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~ 349 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMK-PDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLR 349 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCC-TTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEE
T ss_pred ccCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCe
Confidence 21 134666666776 7999999887654321110 00 1134677778888864
No 234
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.50 E-value=1.4e-07 Score=104.31 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=69.8
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CC---CCccE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PK---GVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~---~~~D~ 966 (1057)
..++.+|||++||+|.+++.++...+..+|+|+|+++.|++.+++|++.++ +++.++++|..++. .. ..||.
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 457889999999999999999865445689999999999999999999988 48999999987753 11 46999
Q ss_pred EEECCCCCChhHH
Q 036185 967 VCLGLIPTSENSW 979 (1057)
Q Consensus 967 Vil~~~P~~~~~~ 979 (1057)
|++|+ |.+...+
T Consensus 102 Vl~D~-gvSs~ql 113 (301)
T 1m6y_A 102 ILMDL-GVSTYQL 113 (301)
T ss_dssp EEEEC-SCCHHHH
T ss_pred EEEcC-ccchhhh
Confidence 99999 7655433
No 235
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.50 E-value=1.4e-06 Score=99.15 Aligned_cols=103 Identities=22% Similarity=0.281 Sum_probs=83.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++......+++++|+ |.+++.+++|++.+++.++++++.+|..+.++. .||+|++..+-
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~vl 259 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPR-KADAIILSFVL 259 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSS-CEEEEEEESCG
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCC-CccEEEEcccc
Confidence 4678999999999999999985544457999999 999999999999999987899999999875554 39999886532
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+. ...+..+.++|+ +||+|++.+..
T Consensus 260 ~~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~ 290 (360)
T 1tw3_A 260 LNWPDHDAVRILTRCAEALE-PGGRILIHERD 290 (360)
T ss_dssp GGSCHHHHHHHHHHHHHTEE-EEEEEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHhcC-CCcEEEEEEEe
Confidence 21 245677777777 69999988776
No 236
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.49 E-value=3.4e-07 Score=99.03 Aligned_cols=99 Identities=20% Similarity=0.325 Sum_probs=79.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.+++.++. .+ .+|+++|+++.+++.+++++ .+.. .++.++.+|+.+.. +...||+|++..
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~-~~-~~v~~vD~s~~~~~~a~~~~-~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~ 112 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIA-RG-YRYIALDADAAMLEVFRQKI-AGVD-RKVQVVQADARAIPLPDESVHGVIVVH 112 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHT-TT-CEEEEEESCHHHHHHHHHHT-TTSC-TTEEEEESCTTSCCSCTTCEEEEEEES
T ss_pred CCCCCEEEEeCCcCCHHHHHHHH-CC-CEEEEEECCHHHHHHHHHHh-hccC-CceEEEEcccccCCCCCCCeeEEEECC
Confidence 46788999999999999999983 34 57999999999999999998 3333 47999999998764 356799999865
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEE
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
. |.....+..+.++|+ +||++.+.
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~-pgG~l~~~ 140 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLK-PGGALLEG 140 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEE-EEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCC-CCcEEEEE
Confidence 2 233566778888888 69988876
No 237
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.49 E-value=1.4e-07 Score=101.95 Aligned_cols=101 Identities=11% Similarity=-0.073 Sum_probs=75.6
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH----------cC------CCccEEEEeCCccc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA----------NS------VSDHCIVLEGDNRF 957 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~----------N~------~~~~v~~~~~D~~~ 957 (1057)
.++.+|||++||+|.+++.+| ..|. .|+|||+++.|++.++++... ++ ...++.++++|+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La-~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFA-DRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHH-HTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCCeEEEeCCCCcHHHHHHH-HCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 478899999999999999998 4565 799999999999999876532 11 12379999999998
Q ss_pred cCCC--CCccEEEECC----CCCC--hhHHHHHHHHhhCCCcEEEEEc
Q 036185 958 TAPK--GVANRVCLGL----IPTS--ENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 958 ~~~~--~~~D~Vil~~----~P~~--~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
.... ..||.|+... +|.. ...+....++|+ +||++.+.+
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lk-pGG~l~l~~ 191 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLR-KEFQYLVAV 191 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEE-EEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcC-CCeEEEEEE
Confidence 7653 6899998532 2322 245677777887 699886443
No 238
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.49 E-value=8e-07 Score=95.03 Aligned_cols=120 Identities=11% Similarity=0.005 Sum_probs=88.4
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil 969 (1057)
+.++.+|||++||+|.++..++. .++ +|+++|+++.+++.++++ +.++.+|+.+.+ +...||+|++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKE-EGI-ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHH-HTC-CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHh-CCC-cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhcCCCCeeEEEE
Confidence 46789999999999999998874 455 599999999999999876 678899998853 3568999998
Q ss_pred CCC----CCC--hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHH----------HHHHHHHHHHhcCCc
Q 036185 970 GLI----PTS--ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEH----------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 970 ~~~----P~~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~----------~~~~i~~~~~~~g~~ 1025 (1057)
... |.. ...+..+.++|+ +||++.+.......-. .+... ..+.+.+++++.|+.
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMK-YSSYIVIESPNPTSLY-SLINFYIDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBC-TTCCEEEEEECTTSHH-HHHHHTTSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcC-CCcEEEEEeCCcchhH-HHHHHhcCccccccCCHHHHHHHHHHCCCe
Confidence 532 222 566777888887 7999888776544311 11000 124677888888986
No 239
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.49 E-value=1.9e-07 Score=99.72 Aligned_cols=97 Identities=11% Similarity=0.098 Sum_probs=77.9
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC--C
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL--I 972 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~--~ 972 (1057)
++.+|||++||+|.++..++. .+ .+|+++|+++.+++.+++++..+++ ++.++++|+.+......||.|++.. +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~-~~-~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~fD~v~~~~~~l 112 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCP-KF-KNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNINRKFDLITCCLDST 112 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGG-GS-SEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCCSCCEEEEEECTTGG
T ss_pred CCCeEEEeCCCCCHHHHHHHH-CC-CcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCccCCceEEEEcCccc
Confidence 678999999999999999883 44 4699999999999999999998887 5899999998865456799999864 2
Q ss_pred CCC------hhHHHHHHHHhhCCCcEEEEE
Q 036185 973 PTS------ENSWVTAVQALRSEGGTLHVH 996 (1057)
Q Consensus 973 P~~------~~~~~~a~~~l~~~gg~l~~~ 996 (1057)
++. ...+..+.++|+ +||++++.
T Consensus 113 ~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~ 141 (246)
T 1y8c_A 113 NYIIDSDDLKKYFKAVSNHLK-EGGVFIFD 141 (246)
T ss_dssp GGCCSHHHHHHHHHHHHTTEE-EEEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHhcC-CCcEEEEE
Confidence 332 334555666666 69988874
No 240
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.48 E-value=2.6e-07 Score=93.01 Aligned_cols=97 Identities=20% Similarity=0.151 Sum_probs=74.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---------CCCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---------APKG 962 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---------~~~~ 962 (1057)
..++.+|||++||+|.+++.++...+. .+|+++|+++ +++. .++.++.+|+.+. ++..
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 567899999999999999999854343 6899999999 6532 3689999999876 3456
Q ss_pred CccEEEECCCCCC---------------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 963 VANRVCLGLIPTS---------------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 963 ~~D~Vil~~~P~~---------------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
.||.|+++++.+. ...+..+.++|+ +||.+.+.......
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLA-PGGSFVVKVFQGEG 141 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEESSTT
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcC-CCcEEEEEEecCCc
Confidence 7999999874332 355777777887 79999987766543
No 241
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.48 E-value=4e-07 Score=100.40 Aligned_cols=103 Identities=12% Similarity=0.061 Sum_probs=81.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCC---ccEEEEeCCccccC----CCCCccE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVS---DHCIVLEGDNRFTA----PKGVANR 966 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~---~~v~~~~~D~~~~~----~~~~~D~ 966 (1057)
.++.+|||++||+|.+++.++ ..++ +|+|+|+++.+++.+++|+...+.. .++.+..+|+.+.. +...||+
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~-~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLV-EEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA 133 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred cCCCEEEEecCCCCHHHHHHH-HCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEE
Confidence 567899999999999999998 4455 7999999999999999998665543 36889999988764 4568999
Q ss_pred EEEC--C---CCC-------ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 967 VCLG--L---IPT-------SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 967 Vil~--~---~P~-------~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|++. . +|. ....+..+.++|+ +||++.+....
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 177 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVR-PGGLLVIDHRN 177 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEE-EEEEEEEEEEC
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcC-CCeEEEEEeCC
Confidence 9985 2 233 3456777888888 69998876543
No 242
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.48 E-value=7.8e-07 Score=92.17 Aligned_cols=95 Identities=14% Similarity=0.076 Sum_probs=71.5
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCC--CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-----------
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAK--ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA----------- 959 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~--a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~----------- 959 (1057)
+.++.+|||++||+|.+++.++.+.+ ..+|+|+|+++.+ ... +++++++|+.+..
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~-~v~~~~~d~~~~~~~~~~~~~~i~ 87 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIP-NVYFIQGEIGKDNMNNIKNINYID 87 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCT-TCEEEECCTTTTSSCCC-------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCC-CceEEEccccchhhhhhccccccc
Confidence 56789999999999999999986554 4689999999942 233 6899999987753
Q ss_pred ---------------CCCCccEEEECCCCCCh---------------hHHHHHHHHhhCCCcEEEEEcccc
Q 036185 960 ---------------PKGVANRVCLGLIPTSE---------------NSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 960 ---------------~~~~~D~Vil~~~P~~~---------------~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+...||.|+.+..++.. ..+..+.++|+ +||.+.+..+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~ 157 (201)
T 2plw_A 88 NMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYIN-IGGTYIVKMYLG 157 (201)
T ss_dssp ----CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEEECS
T ss_pred cccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHcc-CCCEEEEEEeCC
Confidence 34579999998754431 13556777787 699988866543
No 243
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.47 E-value=4.6e-07 Score=99.35 Aligned_cols=99 Identities=20% Similarity=0.166 Sum_probs=80.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++. ...+|+++|+++.+++.+++++ .++.++.+|+.++.....||.|++...
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~fD~v~~~~~ 126 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRVDKPLDAVFSNAM 126 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCCSSCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCcCCCcCEEEEcch
Confidence 35788999999999999999984 3457999999999999999875 268899999988655567999998753
Q ss_pred ----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 973 ----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 973 ----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|.....+..+.++|+ +||++.+.....
T Consensus 127 l~~~~d~~~~l~~~~~~Lk-pgG~l~~~~~~~ 157 (279)
T 3ccf_A 127 LHWVKEPEAAIASIHQALK-SGGRFVAEFGGK 157 (279)
T ss_dssp GGGCSCHHHHHHHHHHHEE-EEEEEEEEEECT
T ss_pred hhhCcCHHHHHHHHHHhcC-CCcEEEEEecCC
Confidence 333566888888888 699998876654
No 244
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.46 E-value=8.5e-07 Score=91.46 Aligned_cols=98 Identities=14% Similarity=0.108 Sum_probs=74.1
Q ss_pred hccCCCCEEEEecCcccHhHHHHHHhCCC---------cEEEEEecCHHHHHHHHHHHHHcCCCccEEEE-eCCccccC-
Q 036185 891 RLDCKDEVIVDLFAGIGYFVLPFLVRAKA---------RLVYACEWNPCAVEALKHNLQANSVSDHCIVL-EGDNRFTA- 959 (1057)
Q Consensus 891 ~~~~~g~~VlDlf~G~G~fsl~~a~~~~a---------~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~-~~D~~~~~- 959 (1057)
..+.++.+|||++||+|.+++.+++..++ .+|+|+|+++.+ .+. +++++ ++|+....
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~-~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 18 QILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLE-GATFLCPADVTDPRT 85 (196)
T ss_dssp CCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCT-TCEEECSCCTTSHHH
T ss_pred CCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCC-CCeEEEeccCCCHHH
Confidence 34578999999999999999999966554 689999999942 233 68889 99976532
Q ss_pred --------CCCCccEEEECCCCCC---------------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 960 --------PKGVANRVCLGLIPTS---------------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 960 --------~~~~~D~Vil~~~P~~---------------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
+...||+|+++..|.. ...+..+.++|+ +||++.+..+...
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~lv~~~~~~~ 149 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQ-PGGTFLCKTWAGS 149 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEE-EEEEEEEEECCSG
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhc-CCCEEEEEecCCc
Confidence 2347999999875543 245677788888 6999998877553
No 245
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.46 E-value=5.8e-07 Score=107.29 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=68.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhC---CCcEEEEEecCHHHHHHHHHHHHHcCCC-ccEEEEeCCcccc--C--CCCCcc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRA---KARLVYACEWNPCAVEALKHNLQANSVS-DHCIVLEGDNRFT--A--PKGVAN 965 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~---~a~~V~avD~n~~ai~~~~~N~~~N~~~-~~v~~~~~D~~~~--~--~~~~~D 965 (1057)
..+.+|+|.+||+|.|.+.++... +...++|+|+|+.+++.++.|+.++++. +++.+.++|.... . ...+||
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccccccccc
Confidence 468899999999999999887542 3467999999999999999999999995 4689999998865 2 246799
Q ss_pred EEEECCCCC
Q 036185 966 RVCLGLIPT 974 (1057)
Q Consensus 966 ~Vil~~~P~ 974 (1057)
+|+.|| |.
T Consensus 300 ~IvaNP-Pf 307 (542)
T 3lkd_A 300 GVLMNP-PY 307 (542)
T ss_dssp EEEECC-CT
T ss_pred EEEecC-Cc
Confidence 999999 75
No 246
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.44 E-value=1.1e-06 Score=106.48 Aligned_cols=118 Identities=10% Similarity=0.046 Sum_probs=84.7
Q ss_pred eEeeCCCHHHHHHH-hhc--cCCCCEEEEecCcccHhHHHHHHhCCC--cEEEEEecCHHHHHHHHHHHHH------cCC
Q 036185 876 CMFSWGNLSEKLRM-ARL--DCKDEVIVDLFAGIGYFVLPFLVRAKA--RLVYACEWNPCAVEALKHNLQA------NSV 944 (1057)
Q Consensus 876 ~~f~~~~~~er~r~-~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a--~~V~avD~n~~ai~~~~~N~~~------N~~ 944 (1057)
.+|.+....++... +.. ..++.+|||++||+|.+++.++. .+. .+|+|+|+++.+++.++++++. +++
T Consensus 699 gtFsPPL~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr-~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl 777 (950)
T 3htx_A 699 AFFKPPLSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLD-YPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV 777 (950)
T ss_dssp CCSSSCHHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTS-SCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC
T ss_pred CcCCchHHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC
Confidence 34566554444432 232 24789999999999999999983 332 6899999999999999997653 355
Q ss_pred CccEEEEeCCccccCC-CCCccEEEECCCCC-C-----hhHHHHHHHHhhCCCcEEEEEc
Q 036185 945 SDHCIVLEGDNRFTAP-KGVANRVCLGLIPT-S-----ENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 945 ~~~v~~~~~D~~~~~~-~~~~D~Vil~~~P~-~-----~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
. +++++++|+.++.. ...||+|++...-. . ..++..+.++|+ +| ++++..
T Consensus 778 ~-nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLK-PG-~LIIST 834 (950)
T 3htx_A 778 K-SATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFH-PK-LLIVST 834 (950)
T ss_dssp S-EEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTC-CS-EEEEEE
T ss_pred C-ceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcC-CC-EEEEEe
Confidence 5 79999999988654 46799999864221 1 135667788888 57 666654
No 247
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.44 E-value=4.2e-07 Score=97.07 Aligned_cols=99 Identities=17% Similarity=0.087 Sum_probs=78.7
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGLI 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~~ 972 (1057)
.++.+|||++||+|.++..++ ..+..+|+++|+++.+++.+++++.. .++.++++|+.+... ...||.|++...
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~-~~~~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 116 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAH-EHGASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLPQDSFDLAYSSLA 116 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHH-HTTCSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCCTTCEEEEEEESC
T ss_pred cCCCEEEEEcCcCCHHHHHHH-HCCCCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCCCCCceEEEEecc
Confidence 468899999999999999988 44665899999999999999987643 268999999988643 567999998652
Q ss_pred ----CCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 973 ----PTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 973 ----P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
+.....+..+.++|+ +||++.+...
T Consensus 117 l~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 145 (243)
T 3bkw_A 117 LHYVEDVARLFRTVHQALS-PGGHFVFSTE 145 (243)
T ss_dssp GGGCSCHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred ccccchHHHHHHHHHHhcC-cCcEEEEEeC
Confidence 233566777788888 6998888653
No 248
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.44 E-value=4.4e-07 Score=97.13 Aligned_cols=98 Identities=15% Similarity=0.012 Sum_probs=74.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHh----CCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc--CC---CCCc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVR----AKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT--AP---KGVA 964 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~----~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~--~~---~~~~ 964 (1057)
.++.+|||++||+|++++.+|.. ....+|++||+++.+++.++ ++.++++++++|+.+. ++ ...|
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~l~~~~~~~f 153 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTTFEHLREMAH 153 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGGGGGGSSSCS
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHHHHhhccCCC
Confidence 35689999999999999999854 23467999999999999887 2235799999999875 22 3369
Q ss_pred cEEEECCCCCC-hhHHHHHHH-HhhCCCcEEEEEcc
Q 036185 965 NRVCLGLIPTS-ENSWVTAVQ-ALRSEGGTLHVHGN 998 (1057)
Q Consensus 965 D~Vil~~~P~~-~~~~~~a~~-~l~~~gg~l~~~~~ 998 (1057)
|.|+++..... ...+..+.+ .|+ +||+|++.+.
T Consensus 154 D~I~~d~~~~~~~~~l~~~~r~~Lk-pGG~lv~~d~ 188 (236)
T 2bm8_A 154 PLIFIDNAHANTFNIMKWAVDHLLE-EGDYFIIEDM 188 (236)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTCC-TTCEEEECSC
T ss_pred CEEEECCchHhHHHHHHHHHHhhCC-CCCEEEEEeC
Confidence 99998873221 334555665 777 7999999876
No 249
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.43 E-value=5.9e-07 Score=93.91 Aligned_cols=101 Identities=18% Similarity=0.075 Sum_probs=79.5
Q ss_pred hccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEE
Q 036185 891 RLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCL 969 (1057)
Q Consensus 891 ~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil 969 (1057)
....++.+|||++||+|.++..+ +..+|+++|+++.+++.+++++ .++.++++|+.+... ...||.|++
T Consensus 32 ~~~~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 32 GLLPPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp TTCCCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred HhcCCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCCCCCCcEEEEEE
Confidence 34457889999999999999765 4547999999999999999987 368899999987643 457999998
Q ss_pred CCC----CCChhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 970 GLI----PTSENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 970 ~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
... +.....+..+.++|+ +||.+.+.......
T Consensus 102 ~~~l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 102 FTTLEFVEDVERVLLEARRVLR-PGGALVVGVLEALS 137 (211)
T ss_dssp ESCTTTCSCHHHHHHHHHHHEE-EEEEEEEEEECTTS
T ss_pred cChhhhcCCHHHHHHHHHHHcC-CCCEEEEEecCCcC
Confidence 642 333566788888888 69999888766543
No 250
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.42 E-value=5.6e-07 Score=96.46 Aligned_cols=107 Identities=10% Similarity=-0.088 Sum_probs=81.4
Q ss_pred HhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC------C
Q 036185 889 MARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK------G 962 (1057)
Q Consensus 889 ~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~------~ 962 (1057)
+.....++.+|||++||+|.+++.++. .+. +|+++|+++.+++.+++++. . .++.++++|+.+.... .
T Consensus 50 ~~~~~~~~~~vLD~GcG~G~~~~~la~-~~~-~v~gvD~s~~~~~~a~~~~~---~-~~~~~~~~d~~~~~~~~~~~~~~ 123 (245)
T 3ggd_A 50 FELLFNPELPLIDFACGNGTQTKFLSQ-FFP-RVIGLDVSKSALEIAAKENT---A-ANISYRLLDGLVPEQAAQIHSEI 123 (245)
T ss_dssp HTTTSCTTSCEEEETCTTSHHHHHHHH-HSS-CEEEEESCHHHHHHHHHHSC---C-TTEEEEECCTTCHHHHHHHHHHH
T ss_pred HhhccCCCCeEEEEcCCCCHHHHHHHH-hCC-CEEEEECCHHHHHHHHHhCc---c-cCceEEECccccccccccccccc
Confidence 333456788999999999999999984 444 79999999999999999872 2 2699999999875421 2
Q ss_pred CccEEEECCCCCC------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 963 VANRVCLGLIPTS------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 963 ~~D~Vil~~~P~~------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
.+|+|+++.+-+. ...+..+.++|+ +||+|.+.++....
T Consensus 124 ~~d~v~~~~~~~~~~~~~~~~~l~~~~~~Lk-pgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPVEKRELLGQSLRILLG-KQGAMYLIELGTGC 168 (245)
T ss_dssp CSCEEEEESSSTTSCGGGHHHHHHHHHHHHT-TTCEEEEEEECTTH
T ss_pred CccEEEEcchhhcCCHHHHHHHHHHHHHHcC-CCCEEEEEeCCccc
Confidence 3899988743222 355777778887 79998888876543
No 251
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.41 E-value=6.5e-07 Score=99.96 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=79.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcC------CCccEEEEeCCccccC-------C
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANS------VSDHCIVLEGDNRFTA-------P 960 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~------~~~~v~~~~~D~~~~~-------~ 960 (1057)
.++.+|||++||+|.++..++. .+..+|+++|+++.+++.+++++..++ ...++.++++|+.+.. +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 4678999999999999999884 456689999999999999999987652 2237999999998863 1
Q ss_pred CCCccEEEECCCCCC--------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 961 KGVANRVCLGLIPTS--------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 961 ~~~~D~Vil~~~P~~--------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
...||+|++...-+. ...+..+.++|+ +||++.+.....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLS-PGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEE-EEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhC-CCcEEEEecCCh
Confidence 347999998753321 244666667777 799998876643
No 252
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.39 E-value=2.1e-07 Score=108.49 Aligned_cols=109 Identities=17% Similarity=0.100 Sum_probs=81.4
Q ss_pred EeeCCCHHHHHHHhhcc--CCCCEEEEecCcccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC
Q 036185 877 MFSWGNLSEKLRMARLD--CKDEVIVDLFAGIGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG 953 (1057)
Q Consensus 877 ~f~~~~~~er~r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~ 953 (1057)
||.+....+ .+++.+ .++.+|||++||+|.|++.++.+. ...+|+|+|+++.|++.+ .++.++++
T Consensus 21 ~~TP~~l~~--~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~ 88 (421)
T 2ih2_A 21 VETPPEVVD--FMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILA 88 (421)
T ss_dssp CCCCHHHHH--HHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEES
T ss_pred EeCCHHHHH--HHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeC
Confidence 455554443 334433 356799999999999999998543 346899999999999877 36899999
Q ss_pred CccccCCCCCccEEEECCCCCCh----------------------------------hHHHHHHHHhhCCCcEEEEEccc
Q 036185 954 DNRFTAPKGVANRVCLGLIPTSE----------------------------------NSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 954 D~~~~~~~~~~D~Vil~~~P~~~----------------------------------~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|..+..+...||+|++|| |... .++..+.++|+ +||.+.+....
T Consensus 89 D~~~~~~~~~fD~Ii~NP-Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk-~~G~~~~i~p~ 166 (421)
T 2ih2_A 89 DFLLWEPGEAFDLILGNP-PYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLK-PGGVLVFVVPA 166 (421)
T ss_dssp CGGGCCCSSCEEEEEECC-CCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEE-EEEEEEEEEEG
T ss_pred ChhhcCccCCCCEEEECc-CccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhC-CCCEEEEEECh
Confidence 999876666899999998 7531 23666777787 68887776544
No 253
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.39 E-value=5.7e-07 Score=99.09 Aligned_cols=79 Identities=27% Similarity=0.353 Sum_probs=67.6
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++++|||++||+|.++..++. . +.+|+|+|+++.+++.+++++..+++.++++++++|+.+... ..||.|+.|+
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-~~fD~vv~nl- 101 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLE-K-AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-PFFDTCVANL- 101 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHH-H-SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC-CCCSEEEEEC-
T ss_pred CCCCCEEEEEcCcccHHHHHHHh-h-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc-hhhcEEEEec-
Confidence 45788999999999999999984 3 347999999999999999999888875689999999987532 3689999998
Q ss_pred CCC
Q 036185 973 PTS 975 (1057)
Q Consensus 973 P~~ 975 (1057)
|..
T Consensus 102 py~ 104 (285)
T 1zq9_A 102 PYQ 104 (285)
T ss_dssp CGG
T ss_pred Ccc
Confidence 654
No 254
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.38 E-value=4.1e-07 Score=98.26 Aligned_cols=99 Identities=15% Similarity=0.057 Sum_probs=78.4
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC-
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI- 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~- 972 (1057)
.++.+|||++||+|.++..++......+|+++|+++.+++.++++ . .++.++.+|+.+..+...||+|+++..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~~~~fD~v~~~~~l 105 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----L-PNTNFGKADLATWKPAQKADLLYANAVF 105 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----S-TTSEEEECCTTTCCCSSCEEEEEEESCG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----C-CCcEEEECChhhcCccCCcCEEEEeCch
Confidence 567899999999999999998543344699999999999999988 2 368999999988765567999998753
Q ss_pred ---CCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 973 ---PTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 973 ---P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|.....+..+.++|+ +||++.+....
T Consensus 106 ~~~~~~~~~l~~~~~~L~-pgG~l~~~~~~ 134 (259)
T 2p35_A 106 QWVPDHLAVLSQLMDQLE-SGGVLAVQMPD 134 (259)
T ss_dssp GGSTTHHHHHHHHGGGEE-EEEEEEEEEEC
T ss_pred hhCCCHHHHHHHHHHhcC-CCeEEEEEeCC
Confidence 233455667777777 69999887653
No 255
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.38 E-value=2.5e-07 Score=110.87 Aligned_cols=118 Identities=19% Similarity=0.111 Sum_probs=88.1
Q ss_pred EeeCCCHHHHHHHhhc--cCCCCEEEEecCcccHhHHHHHHhCC------------------CcEEEEEecCHHHHHHHH
Q 036185 877 MFSWGNLSEKLRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAK------------------ARLVYACEWNPCAVEALK 936 (1057)
Q Consensus 877 ~f~~~~~~er~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~------------------a~~V~avD~n~~ai~~~~ 936 (1057)
||.|+...+. |++. ...+.+|+|++||+|.|.+.++.... ...++|+|+|+.+++.++
T Consensus 151 fyTP~~iv~~--mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 151 YFTPRPLIKT--IIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp CCCCHHHHHH--HHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred eeCCHHHHHH--HHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 5666654433 3333 35678999999999999998874311 136999999999999999
Q ss_pred HHHHHcCCCc----cEEEEeCCccccC--CCCCccEEEECCCCCCh-------------------hHHHHHHHHhhCCCc
Q 036185 937 HNLQANSVSD----HCIVLEGDNRFTA--PKGVANRVCLGLIPTSE-------------------NSWVTAVQALRSEGG 991 (1057)
Q Consensus 937 ~N~~~N~~~~----~v~~~~~D~~~~~--~~~~~D~Vil~~~P~~~-------------------~~~~~a~~~l~~~gg 991 (1057)
.|+.++++.. ++.++++|..... ....||+|++|| |... .++..+++.|+ +||
T Consensus 229 ~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NP-Pf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk-~gG 306 (541)
T 2ar0_A 229 MNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNP-PFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLH-PGG 306 (541)
T ss_dssp HHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECC-CCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEE-EEE
T ss_pred HHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECC-CcccccchhhHhhcCCCCCchHHHHHHHHHHHhC-CCC
Confidence 9999999873 2788999987643 245799999999 7542 46777888888 688
Q ss_pred EEEEEcc
Q 036185 992 TLHVHGN 998 (1057)
Q Consensus 992 ~l~~~~~ 998 (1057)
.+.+...
T Consensus 307 r~a~V~p 313 (541)
T 2ar0_A 307 RAAVVVP 313 (541)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 7666543
No 256
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.36 E-value=2e-06 Score=96.90 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=82.2
Q ss_pred CEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCCC--
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIPT-- 974 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P~-- 974 (1057)
.+|||++||+|.++..++......+++++|+ |.+++.+++++..+++.++++++.+|..+..+ ..||+|++...-+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEVP-SNGDIYLLSRIIGDL 246 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCCC-SSCSEEEEESCGGGC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCCC-CCCCEEEEchhccCC
Confidence 8999999999999999986544557999999 99999999999988887789999999988544 5699999865332
Q ss_pred --C--hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 975 --S--ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 975 --~--~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
. ...+..+.++|+ +||+|.+.+...
T Consensus 247 ~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~ 275 (334)
T 2ip2_A 247 DEAASLRLLGNCREAMA-GDGRVVVIERTI 275 (334)
T ss_dssp CHHHHHHHHHHHHHHSC-TTCEEEEEECCB
T ss_pred CHHHHHHHHHHHHHhcC-CCCEEEEEEecc
Confidence 1 255667777777 799999887654
No 257
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.35 E-value=3.1e-07 Score=109.84 Aligned_cols=116 Identities=15% Similarity=0.082 Sum_probs=84.9
Q ss_pred EeeCCCHHHHHHHhhc--cCCCCEEEEecCcccHhHHHHHHhCC---------------CcEEEEEecCHHHHHHHHHHH
Q 036185 877 MFSWGNLSEKLRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAK---------------ARLVYACEWNPCAVEALKHNL 939 (1057)
Q Consensus 877 ~f~~~~~~er~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~---------------a~~V~avD~n~~ai~~~~~N~ 939 (1057)
||.|+...+. |+.. ...+ +|+|.+||+|.|.+.++.... ...++|+|+||.+++.++.|+
T Consensus 227 fyTP~~Vv~l--mv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl 303 (544)
T 3khk_A 227 YYTPKSIVTL--IVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNM 303 (544)
T ss_dssp TCCCHHHHHH--HHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHH
T ss_pred EeCCHHHHHH--HHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHH
Confidence 4556555433 3333 2334 999999999999988763211 347999999999999999999
Q ss_pred HHcCCCccEEEEeCCccccCC--CCCccEEEECCCCCCh----------------------------------hHHHHHH
Q 036185 940 QANSVSDHCIVLEGDNRFTAP--KGVANRVCLGLIPTSE----------------------------------NSWVTAV 983 (1057)
Q Consensus 940 ~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~~P~~~----------------------------------~~~~~a~ 983 (1057)
.++++..++.+.++|...... ..+||+||+|| |... .++..++
T Consensus 304 ~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NP-Pf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l 382 (544)
T 3khk_A 304 VIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNP-PFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHML 382 (544)
T ss_dssp HHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECC-CSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHH
T ss_pred HHhCCCcccceeccchhcCcccccccccEEEECC-CcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHH
Confidence 999997666568999775432 45799999999 7653 2466777
Q ss_pred HHhhCCCcEEEEEc
Q 036185 984 QALRSEGGTLHVHG 997 (1057)
Q Consensus 984 ~~l~~~gg~l~~~~ 997 (1057)
+.|+ +||.+.+..
T Consensus 383 ~~Lk-~gGr~aiVl 395 (544)
T 3khk_A 383 YHLA-PTGSMALLL 395 (544)
T ss_dssp HTEE-EEEEEEEEE
T ss_pred HHhc-cCceEEEEe
Confidence 7887 688765554
No 258
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.34 E-value=3.1e-06 Score=89.10 Aligned_cols=117 Identities=19% Similarity=0.178 Sum_probs=86.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGLI 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~~ 972 (1057)
.++.+|||++||+|.++..++ .. +++|+++.+++.++++ ++.++++|+.+... ...||+|++...
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~--~~----~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLK--IK----IGVEPSERMAEIARKR--------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHT--CC----EEEESCHHHHHHHHHT--------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCCCcEEEeCCCCCHHHHHHH--HH----hccCCCHHHHHHHHhc--------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 448899999999999999887 22 9999999999999987 47889999877543 457999998742
Q ss_pred ----CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHH--------------HHHHHHHHHHhcCCc
Q 036185 973 ----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEH--------------VSKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 ----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~--------------~~~~i~~~~~~~g~~ 1025 (1057)
+.....+..+.++|+ +||++.+............... ..+.+.+++++.|+.
T Consensus 112 l~~~~~~~~~l~~~~~~L~-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILK-KGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEE-EEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCE
T ss_pred HhhccCHHHHHHHHHHHcC-CCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCe
Confidence 344566778888887 6999998876554322111111 135778888889985
No 259
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.34 E-value=8.7e-07 Score=93.27 Aligned_cols=97 Identities=13% Similarity=0.092 Sum_probs=76.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc-----CCCCCccEEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT-----APKGVANRVC 968 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~-----~~~~~~D~Vi 968 (1057)
..+.+|||++||+|.++..++ ..++ +|+++|+++.+++.++++ .++.++.+|+.+. .....||+|+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~-~~~~-~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~fD~v~ 121 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALA-DRGI-EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKVPVGKDYDLIC 121 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHH-TTTC-EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCSCCCCCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccccccCCCccEEE
Confidence 467899999999999999988 3444 799999999999999987 2467888888776 2345699999
Q ss_pred ECCC---CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 969 LGLI---PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~---P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+... +.....+..+.++|+ +||+|.+.....
T Consensus 122 ~~~~l~~~~~~~~l~~~~~~L~-pgG~l~~~~~~~ 155 (227)
T 3e8s_A 122 ANFALLHQDIIELLSAMRTLLV-PGGALVIQTLHP 155 (227)
T ss_dssp EESCCCSSCCHHHHHHHHHTEE-EEEEEEEEECCT
T ss_pred ECchhhhhhHHHHHHHHHHHhC-CCeEEEEEecCc
Confidence 8752 334566778888887 799999877643
No 260
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.33 E-value=1.3e-06 Score=97.00 Aligned_cols=102 Identities=9% Similarity=-0.003 Sum_probs=74.0
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc-----cEEEEeCCc------ccc---CC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD-----HCIVLEGDN------RFT---AP 960 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~-----~v~~~~~D~------~~~---~~ 960 (1057)
++.+|||++||+|.....++ ..+..+|+|+|+++.+++.|++.+...+... ++.+..+|+ .++ .+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~-~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYF-YGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHH-hcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 47899999999998777665 3555689999999999999999887665431 256777776 221 23
Q ss_pred CCCccEEEECCC-------CCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 961 KGVANRVCLGLI-------PTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 961 ~~~~D~Vil~~~-------P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
...||+|++... ++....+..+.++|+ +||++.+.+.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lk-pGG~~i~~~~ 170 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTA-SGGKVLITTM 170 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEE-EEEEEEEEEE
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcC-CCCEEEEEeC
Confidence 467999986421 122556777788888 7999887665
No 261
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.33 E-value=1.9e-07 Score=101.11 Aligned_cols=130 Identities=15% Similarity=0.099 Sum_probs=89.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCC----------------------------C
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSV----------------------------S 945 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~----------------------------~ 945 (1057)
.++.+|||++||+|.+++.++ ..+..+|+++|+++.+++.++++++.++. .
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSA-CESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTG-GGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHh-hcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 467899999999999999887 45556899999999999999999876541 1
Q ss_pred ccE-EEEeCCccccCC--C---CCccEEEECCCCC--------ChhHHHHHHHHhhCCCcEEEEEcccccch--hH--H-
Q 036185 946 DHC-IVLEGDNRFTAP--K---GVANRVCLGLIPT--------SENSWVTAVQALRSEGGTLHVHGNVKDSE--EK--L- 1006 (1057)
Q Consensus 946 ~~v-~~~~~D~~~~~~--~---~~~D~Vil~~~P~--------~~~~~~~a~~~l~~~gg~l~~~~~~~~~~--~~--~- 1006 (1057)
.++ .++.+|+.+..+ . ..||+|++...-+ ....+..+.++|+ +||+|.+........ .. .
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk-pgG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK-PGGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEESSCCEEEETTEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC-CCcEEEEEecCCCceEEcCCccc
Confidence 137 899999987643 3 6799999864222 2344666667777 799988876432110 00 0
Q ss_pred H-HHHHHHHHHHHHHhcCCc
Q 036185 1007 W-AEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 1007 ~-~~~~~~~i~~~~~~~g~~ 1025 (1057)
. ..--.+.+.+++++.|+.
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~ 232 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYT 232 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCE
T ss_pred cccccCHHHHHHHHHHCCCE
Confidence 0 000023566777888875
No 262
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.32 E-value=1.9e-06 Score=98.23 Aligned_cols=105 Identities=21% Similarity=0.134 Sum_probs=82.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++++....+|+++|+ |.+++.++++++.+++.++++++.+|..+.... .+|+|++...
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~~~~v 265 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EADAVLFCRI 265 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-CCSEEEEESC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-CCCEEEEech
Confidence 35678999999999999999986544457999999 999999999999999987899999999876322 3499988753
Q ss_pred CCC------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 973 PTS------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 973 P~~------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
-+. ...+..+.++|+ +||+|.+.+...
T Consensus 266 lh~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~ 298 (359)
T 1x19_A 266 LYSANEQLSTIMCKKAFDAMR-SGGRLLILDMVI 298 (359)
T ss_dssp GGGSCHHHHHHHHHHHHTTCC-TTCEEEEEEECC
T ss_pred hccCCHHHHHHHHHHHHHhcC-CCCEEEEEeccc
Confidence 321 334566666676 799998887553
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.31 E-value=1e-06 Score=95.12 Aligned_cols=87 Identities=14% Similarity=0.071 Sum_probs=66.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANRV 967 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~V 967 (1057)
..++++|||++||+|.++..++. . +.+|+|+|+++.+++.+++++.. . ++++++++|+.++.. ...+| |
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~-~-~~~V~avEid~~~~~~~~~~~~~--~-~~v~~i~~D~~~~~~~~~~~~~~~~-v 100 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLT-E-CDNLALVEIDRDLVAFLQKKYNQ--Q-KNITIYQNDALQFDFSSVKTDKPLR-V 100 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTT-T-SSEEEEEECCHHHHHHHHHHHTT--C-TTEEEEESCTTTCCGGGSCCSSCEE-E
T ss_pred CCCcCEEEEEcccccHHHHHHHH-h-CCEEEEEECCHHHHHHHHHHHhh--C-CCcEEEEcchHhCCHHHhccCCCeE-E
Confidence 46789999999999999999983 3 46899999999999999999865 2 479999999988642 23466 8
Q ss_pred EECCCCCChhHHHHHHHHhh
Q 036185 968 CLGLIPTSENSWVTAVQALR 987 (1057)
Q Consensus 968 il~~~P~~~~~~~~a~~~l~ 987 (1057)
|.|+ |+... -....++|.
T Consensus 101 v~Nl-PY~is-~~il~~ll~ 118 (255)
T 3tqs_A 101 VGNL-PYNIS-TPLLFHLFS 118 (255)
T ss_dssp EEEC-CHHHH-HHHHHHHHH
T ss_pred EecC-CcccC-HHHHHHHHh
Confidence 8888 87432 233344454
No 264
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.31 E-value=2.4e-06 Score=89.92 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=77.9
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECC-C
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGL-I 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~-~ 972 (1057)
....+|||++||.|+|+++++ ++.+++|+|+++.+++.+++|+..|+. +..+..+|.....+...+|+|++.. +
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~~~~~DvvLllk~l 178 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPPAEAGDLALIFKLL 178 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCCCCBCSEEEEESCH
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCCCCCcchHHHHHHH
Confidence 457799999999999999876 666899999999999999999999996 4789999998877777899997763 2
Q ss_pred CCC----hhHHHHHHHHhhCCCcEEEEEc
Q 036185 973 PTS----ENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 973 P~~----~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
|.- .......+..|+ ++++++-..
T Consensus 179 h~LE~q~~~~~~~ll~aL~-~~~vvVsfP 206 (253)
T 3frh_A 179 PLLEREQAGSAMALLQSLN-TPRMAVSFP 206 (253)
T ss_dssp HHHHHHSTTHHHHHHHHCB-CSEEEEEEE
T ss_pred HHhhhhchhhHHHHHHHhc-CCCEEEEcC
Confidence 221 122336777777 577766665
No 265
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.31 E-value=1.1e-06 Score=95.23 Aligned_cols=102 Identities=21% Similarity=0.141 Sum_probs=78.0
Q ss_pred HHhhcc--CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCc
Q 036185 888 RMARLD--CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVA 964 (1057)
Q Consensus 888 r~~~~~--~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~ 964 (1057)
.+...+ .++.+|||++||+|.+++.++ .. ..+|+++|+++.+++.++++. ++.++.+|+.+... ...|
T Consensus 25 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~-~~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~~~~f 95 (261)
T 3ege_A 25 AIINLLNLPKGSVIADIGAGTGGYSVALA-NQ-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALPDKSV 95 (261)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHH-TT-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSCTTCB
T ss_pred HHHHHhCCCCCCEEEEEcCcccHHHHHHH-hC-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCCCCCE
Confidence 444443 678999999999999999998 33 457999999999999877654 69999999987543 5689
Q ss_pred cEEEECCC----CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 965 NRVCLGLI----PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 965 D~Vil~~~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|.|++... +.....+..+.++|+ ||++.+.++..
T Consensus 96 D~v~~~~~l~~~~~~~~~l~~~~~~Lk--gG~~~~~~~~~ 133 (261)
T 3ege_A 96 DGVISILAIHHFSHLEKSFQEMQRIIR--DGTIVLLTFDI 133 (261)
T ss_dssp SEEEEESCGGGCSSHHHHHHHHHHHBC--SSCEEEEEECG
T ss_pred eEEEEcchHhhccCHHHHHHHHHHHhC--CcEEEEEEcCC
Confidence 99998653 233556777777776 88777766653
No 266
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.30 E-value=8.3e-07 Score=94.64 Aligned_cols=126 Identities=14% Similarity=0.089 Sum_probs=78.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCc--cEEEEe-CCccccCCCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSD--HCIVLE-GDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~--~v~~~~-~D~~~~~~~~~~D~Vil~ 970 (1057)
..+.+|||++||+|.|+..++ ..++.+|+|+|+++.+++.+++|.......+ ++.++. .|.. ...+|.+.+|
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la-~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~~D 110 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVML-QNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFE----QGRPSFTSID 110 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHH-HTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCC----SCCCSEEEEC
T ss_pred CCCCEEEEEccCCCHHHHHHH-hcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcC----cCCCCEEEEE
Confidence 457899999999999999998 4577789999999999998777543211100 111111 1111 1124555555
Q ss_pred CCCCC-hhHHHHHHHHhhCCCcEEEEEc---ccccchh---------HHHHHHHHHHHHHHHHhcCCc
Q 036185 971 LIPTS-ENSWVTAVQALRSEGGTLHVHG---NVKDSEE---------KLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 971 ~~P~~-~~~~~~a~~~l~~~gg~l~~~~---~~~~~~~---------~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
..-.+ ...+.++.++|+ +||.+.+.. +....+. ........+.+.+++++.|+.
T Consensus 111 ~v~~~l~~~l~~i~rvLk-pgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 111 VSFISLDLILPPLYEILE-KNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp CSSSCGGGTHHHHHHHSC-TTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred EEhhhHHHHHHHHHHhcc-CCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 42222 667888888888 799888752 1111000 011223456788888999975
No 267
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.27 E-value=1.5e-06 Score=92.51 Aligned_cols=97 Identities=14% Similarity=0.074 Sum_probs=75.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEE-C-
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCL-G- 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil-~- 970 (1057)
..++.+|||++||+|.++..++. .+. +|+++|+++.+++.++++. . ++.++++|+.+......||+|++ .
T Consensus 38 ~~~~~~vLdiG~G~G~~~~~l~~-~~~-~v~~~D~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~~~~~D~v~~~~~ 109 (239)
T 3bxo_A 38 TPEASSLLDVACGTGTHLEHFTK-EFG-DTAGLELSEDMLTHARKRL-----P-DATLHQGDMRDFRLGRKFSAVVSMFS 109 (239)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHH-HHS-EEEEEESCHHHHHHHHHHC-----T-TCEEEECCTTTCCCSSCEEEEEECTT
T ss_pred cCCCCeEEEecccCCHHHHHHHH-hCC-cEEEEeCCHHHHHHHHHhC-----C-CCEEEECCHHHcccCCCCcEEEEcCc
Confidence 46788999999999999999884 344 7999999999999999874 2 58899999988655567999994 3
Q ss_pred CCCCC------hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 971 LIPTS------ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 971 ~~P~~------~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.+.+. ...+..+.++|+ +||++.+..+
T Consensus 110 ~~~~~~~~~~~~~~l~~~~~~L~-pgG~l~~~~~ 142 (239)
T 3bxo_A 110 SVGYLKTTEELGAAVASFAEHLE-PGGVVVVEPW 142 (239)
T ss_dssp GGGGCCSHHHHHHHHHHHHHTEE-EEEEEEECCC
T ss_pred hHhhcCCHHHHHHHHHHHHHhcC-CCeEEEEEec
Confidence 21221 344666677777 6999988754
No 268
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.27 E-value=2e-06 Score=97.55 Aligned_cols=128 Identities=17% Similarity=0.176 Sum_probs=96.2
Q ss_pred CCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC--CCCCccEEEECCCC
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA--PKGVANRVCLGLIP 973 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~--~~~~~D~Vil~~~P 973 (1057)
+.+|||++||+|.++..++++....+++++|+ |.+++.+++++..+++.++++++.+|.++.. ....||+|++...-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 78999999999999999986554568999999 9999999999999999888999999998875 44569999986533
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcccccchh----HH-HH------------HHHHHHHHHHHHhcCCc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNVKDSEE----KL-WA------------EHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~----~~-~~------------~~~~~~i~~~~~~~g~~ 1025 (1057)
+. ...+..+.++|+ +||.|.+.+....... .. +. ....+.+.+++++.|+.
T Consensus 259 h~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 332 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVK-PGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLA 332 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEE-EEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCE
T ss_pred ccCCHHHHHHHHHHHHHHcC-CCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCc
Confidence 31 345666667777 6999998876533211 00 00 01134577888889985
No 269
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.26 E-value=2.3e-06 Score=92.66 Aligned_cols=98 Identities=14% Similarity=0.039 Sum_probs=76.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.++..++ ..+ .+|+++|+++.+++.++++.. . + ++.+|+.+... ...||.|++..
T Consensus 52 ~~~~~~vLDiGcG~G~~~~~l~-~~~-~~v~gvD~s~~~l~~a~~~~~----~-~--~~~~d~~~~~~~~~~fD~v~~~~ 122 (260)
T 2avn_A 52 LKNPCRVLDLGGGTGKWSLFLQ-ERG-FEVVLVDPSKEMLEVAREKGV----K-N--VVEAKAEDLPFPSGAFEAVLALG 122 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHH-TTT-CEEEEEESCHHHHHHHHHHTC----S-C--EEECCTTSCCSCTTCEEEEEECS
T ss_pred cCCCCeEEEeCCCcCHHHHHHH-HcC-CeEEEEeCCHHHHHHHHhhcC----C-C--EEECcHHHCCCCCCCEEEEEEcc
Confidence 3578899999999999999988 344 479999999999999998854 1 2 78899887543 56799999863
Q ss_pred -----CCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 972 -----IPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 972 -----~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
++.....+..+.++|+ +||+|.+.....
T Consensus 123 ~~~~~~~~~~~~l~~~~~~Lk-pgG~l~~~~~~~ 155 (260)
T 2avn_A 123 DVLSYVENKDKAFSEIRRVLV-PDGLLIATVDNF 155 (260)
T ss_dssp SHHHHCSCHHHHHHHHHHHEE-EEEEEEEEEEBH
T ss_pred hhhhccccHHHHHHHHHHHcC-CCeEEEEEeCCh
Confidence 1333566777788888 699998877654
No 270
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.22 E-value=2.9e-06 Score=92.29 Aligned_cols=97 Identities=11% Similarity=0.128 Sum_probs=77.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC-CCCCccEEEECCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA-PKGVANRVCLGLI 972 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~-~~~~~D~Vil~~~ 972 (1057)
.++.+|||++||.|.++..++...+..+|+++|+++.+++.++++. . ++.++.+|+.+.. +...||.|+....
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~-~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----P-QVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----T-TSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----C-CcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 5788999999999999999985433457999999999999998874 2 5789999987653 3457999998764
Q ss_pred CCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 973 PTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 973 P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
| ..+..+.++|+ +||+|++.....
T Consensus 158 ~---~~l~~~~~~L~-pgG~l~~~~~~~ 181 (269)
T 1p91_A 158 P---CKAEELARVVK-PGGWVITATPGP 181 (269)
T ss_dssp C---CCHHHHHHHEE-EEEEEEEEEECT
T ss_pred h---hhHHHHHHhcC-CCcEEEEEEcCH
Confidence 4 34778888898 699988887654
No 271
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.19 E-value=1.6e-06 Score=104.20 Aligned_cols=80 Identities=28% Similarity=0.235 Sum_probs=64.5
Q ss_pred CCCEEEEecCcccHh---HHHHHHhCCCc-EEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEEC
Q 036185 895 KDEVIVDLFAGIGYF---VLPFLVRAKAR-LVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~f---sl~~a~~~~a~-~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~ 970 (1057)
++.+|+|++||.|++ ++.|+++.+.+ +|||||.||.|. .+++..+.|++.++|+++++|++++-..+++|+||--
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSE 435 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSE 435 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECC
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEE
Confidence 346899999999999 55555332221 699999999766 5777899999999999999999998766789999987
Q ss_pred CCCCC
Q 036185 971 LIPTS 975 (1057)
Q Consensus 971 ~~P~~ 975 (1057)
++.++
T Consensus 436 wMG~f 440 (637)
T 4gqb_A 436 LLGSF 440 (637)
T ss_dssp CCBTT
T ss_pred cCccc
Confidence 76654
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.19 E-value=1.1e-05 Score=83.26 Aligned_cols=101 Identities=15% Similarity=-0.014 Sum_probs=79.8
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCC--CccEEEEeCCcccc-----------
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSV--SDHCIVLEGDNRFT----------- 958 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~--~~~v~~~~~D~~~~----------- 958 (1057)
.+.+.++||+++| |+=++.+|+ ....+|++||.|++-++.+++|++.+++ .++|+++.+|+.+.
T Consensus 27 ~l~~a~~VLEiGt--GySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~ 103 (202)
T 3cvo_A 27 AYEEAEVILEYGS--GGSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAK 103 (202)
T ss_dssp HHHHCSEEEEESC--SHHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred HhhCCCEEEEECc--hHHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchh
Confidence 3456789999998 567777763 3246899999999999999999999998 78999999997653
Q ss_pred ---C----------C-CCCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEc
Q 036185 959 ---A----------P-KGVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHG 997 (1057)
Q Consensus 959 ---~----------~-~~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~ 997 (1057)
+ . ...||+|++|- ......+..+++.|+ +||+|.+..
T Consensus 104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg-~k~~~~~~~~l~~l~-~GG~Iv~DN 154 (202)
T 3cvo_A 104 WRSYPDYPLAVWRTEGFRHPDVVLVDG-RFRVGCALATAFSIT-RPVTLLFDD 154 (202)
T ss_dssp GGGTTHHHHGGGGCTTCCCCSEEEECS-SSHHHHHHHHHHHCS-SCEEEEETT
T ss_pred hhhHHHHhhhhhccccCCCCCEEEEeC-CCchhHHHHHHHhcC-CCeEEEEeC
Confidence 1 1 25799999998 544566778888887 799985544
No 273
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.19 E-value=3.2e-06 Score=95.49 Aligned_cols=120 Identities=18% Similarity=0.205 Sum_probs=85.2
Q ss_pred CEEEEecCcccHhHHHHHHhCC--CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC----CCccEEEEC
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAK--ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK----GVANRVCLG 970 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~--a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~----~~~D~Vil~ 970 (1057)
.+|+|||||+|++++.+. .+| ++.|+|+|+++.|++..+.|.. ...++++|+.++... ..+|+|+++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~-~~G~~~~~v~~~E~d~~a~~~~~~N~~------~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALR-ESCIPAQVVAAIDVNTVANEVYKYNFP------HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHH-HHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHH-HCCCCceEEEEEeCCHHHHHHHHHhcc------ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 479999999999999987 567 5689999999999999999963 235788999887531 258999999
Q ss_pred CCC---CC------------hhHHHHHHHHhhCCC--cEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceee
Q 036185 971 LIP---TS------------ENSWVTAVQALRSEG--GTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEV 1028 (1057)
Q Consensus 971 ~~P---~~------------~~~~~~a~~~l~~~g--g~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 1028 (1057)
| | .+ ...+...+++++.-. -.+.+.+|+....- ....+.+.+.+++.|+.+..
T Consensus 76 p-PCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~~----~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 76 P-PCQPFTRIGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFEV----SSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp C-C------------------CHHHHHHHHGGGCSSCCSEEEEEEETTGGG----SHHHHHHHHHHHHTTEEEEE
T ss_pred C-CCcchhhcCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCccccC----HHHHHHHHHHHHHCCCeeEE
Confidence 9 7 11 013555667765333 44667788875321 12345666777788987643
No 274
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.18 E-value=1.4e-06 Score=104.14 Aligned_cols=97 Identities=18% Similarity=0.043 Sum_probs=72.4
Q ss_pred CCEEEEecCcccHhHH---HHHHhCC----------CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--
Q 036185 896 DEVIVDLFAGIGYFVL---PFLVRAK----------ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-- 960 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl---~~a~~~~----------a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-- 960 (1057)
+.+|||++||+|+++. .|++.++ +.+|+|||.||.|+..+++... |++.++|+++++|++++-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 4589999999999964 4442122 3489999999999988777665 9999899999999999853
Q ss_pred ----CCCccEEEECCCCCCh------hHHHHHHHHhhCCCcEEE
Q 036185 961 ----KGVANRVCLGLIPTSE------NSWVTAVQALRSEGGTLH 994 (1057)
Q Consensus 961 ----~~~~D~Vil~~~P~~~------~~~~~a~~~l~~~gg~l~ 994 (1057)
.+++|+||--++.++- ..+..+-+.|+ +||+++
T Consensus 489 ~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lk-p~Gi~i 531 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLK-PTTISI 531 (745)
T ss_dssp HHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSC-TTCEEE
T ss_pred ccCCCCcccEEEEeccccccchhccHHHHHHHHHhCC-CCcEEE
Confidence 5689999999877652 22333334555 688643
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.16 E-value=2.1e-06 Score=104.15 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=61.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCC---CcEEEEEecCHHHHHHH--HHHHHHcCCCc---cEEEEeCCccccC--CCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAK---ARLVYACEWNPCAVEAL--KHNLQANSVSD---HCIVLEGDNRFTA--PKGV 963 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~---a~~V~avD~n~~ai~~~--~~N~~~N~~~~---~v~~~~~D~~~~~--~~~~ 963 (1057)
.++.+|||++||+|.|.+.++...+ ...++|+|+++.+++.| +.|+..|++.. ...+...|..... ....
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~k 399 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFAN 399 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTT
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCC
Confidence 3588999999999999999885433 24699999999999999 88888765431 2355566665522 2457
Q ss_pred ccEEEECCCCC
Q 036185 964 ANRVCLGLIPT 974 (1057)
Q Consensus 964 ~D~Vil~~~P~ 974 (1057)
||+||.|| |.
T Consensus 400 FDVVIgNP-PY 409 (878)
T 3s1s_A 400 VSVVVMNP-PY 409 (878)
T ss_dssp EEEEEECC-BC
T ss_pred CCEEEECC-Cc
Confidence 99999999 87
No 276
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.15 E-value=1.1e-06 Score=95.53 Aligned_cols=76 Identities=16% Similarity=0.078 Sum_probs=63.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC--CCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK--GVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~--~~~D~Vil~ 970 (1057)
..++ +|||++||+|.++..++. .+ .+|+|+|+++.+++.+++++.. ++++++++|+.++... ..+|.|+.|
T Consensus 45 ~~~~-~VLEIG~G~G~lt~~L~~-~~-~~V~avEid~~~~~~l~~~~~~----~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 45 PFTG-PVFEVGPGLGALTRALLE-AG-AEVTAIEKDLRLRPVLEETLSG----LPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp CCCS-CEEEECCTTSHHHHHHHH-TT-CCEEEEESCGGGHHHHHHHTTT----SSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred CCCC-eEEEEeCchHHHHHHHHH-cC-CEEEEEECCHHHHHHHHHhcCC----CCEEEEECChhhCChhhccCccEEEec
Confidence 4667 999999999999999983 44 5799999999999999999862 4799999999886432 258999999
Q ss_pred CCCCCh
Q 036185 971 LIPTSE 976 (1057)
Q Consensus 971 ~~P~~~ 976 (1057)
+ |+..
T Consensus 118 l-Py~i 122 (271)
T 3fut_A 118 L-PYHI 122 (271)
T ss_dssp E-CSSC
T ss_pred C-cccc
Confidence 8 8754
No 277
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.13 E-value=2.3e-05 Score=85.70 Aligned_cols=103 Identities=15% Similarity=0.038 Sum_probs=77.9
Q ss_pred CCCEEEEecCcc---cHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc------------C
Q 036185 895 KDEVIVDLFAGI---GYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT------------A 959 (1057)
Q Consensus 895 ~g~~VlDlf~G~---G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~------------~ 959 (1057)
...+|||++||+ |.++..++......+|+++|++|.+++.+++++..+ +++.++++|+++. +
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~---~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD---PNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC---TTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC---CCeEEEEeeCCCchhhhccchhhccC
Confidence 347999999999 998766653333457999999999999999998432 4799999999753 2
Q ss_pred CCCCccEEEECCC----CC--ChhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 960 PKGVANRVCLGLI----PT--SENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 960 ~~~~~D~Vil~~~----P~--~~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
+-..||.|++..+ |. ....+....++|+ +||+|.+.+....
T Consensus 154 d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~-pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 154 DFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA-PGSYLFMTSLVDT 200 (274)
T ss_dssp CTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC-TTCEEEEEEEBCS
T ss_pred CCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCC-CCcEEEEEEecCc
Confidence 2246899998742 33 2455777777887 7999998888764
No 278
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.12 E-value=1.1e-05 Score=88.85 Aligned_cols=132 Identities=8% Similarity=-0.030 Sum_probs=87.6
Q ss_pred CCCCEEEEecCcccHhHHHHHH----hC-CCc-EEEEEecCHHHHHHHHHHHHHc-CCCc-cEEEEeCCccccC------
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLV----RA-KAR-LVYACEWNPCAVEALKHNLQAN-SVSD-HCIVLEGDNRFTA------ 959 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~----~~-~a~-~V~avD~n~~ai~~~~~N~~~N-~~~~-~v~~~~~D~~~~~------ 959 (1057)
.++.+|||++||+|.+++.++. +. ++. .++++|.++.+++.+++++... ++.. ++.+..+|+.++.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3567999999999988765431 11 232 2499999999999999998754 4542 2345677776543
Q ss_pred -CCCCccEEEECC----CCCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHH--------------HHHHHHHHH
Q 036185 960 -PKGVANRVCLGL----IPTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHV--------------SKSIYEIAR 1020 (1057)
Q Consensus 960 -~~~~~D~Vil~~----~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~--------------~~~i~~~~~ 1020 (1057)
+...||+|++.. +|.....+.+..++|+ +||++.+....+........... .+.+.++++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKDIPATLKFFHSLLG-TNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEE-EEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred cCCCceeEEEEeeeeeecCCHHHHHHHHHHHcC-CCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 346799999864 2444667888888888 69998887655433221111111 235677788
Q ss_pred hcCCce
Q 036185 1021 SEGHRW 1026 (1057)
Q Consensus 1021 ~~g~~~ 1026 (1057)
+.|+.+
T Consensus 210 ~aGf~~ 215 (292)
T 2aot_A 210 NLGLKY 215 (292)
T ss_dssp HHTCCE
T ss_pred HCCCce
Confidence 888763
No 279
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.12 E-value=1.9e-06 Score=94.85 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=82.8
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc-----------------CCC------------
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN-----------------SVS------------ 945 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N-----------------~~~------------ 945 (1057)
++.+|||++||+|.+++.++ ..+..+|+|+|+++.+++.++++++.+ +..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~-~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSA-CSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTG-GGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhh-ccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 67899999999999776554 334558999999999999999876532 100
Q ss_pred ccEEEEeCCccccCC-------CCCccEEEECCCC--------CChhHHHHHHHHhhCCCcEEEEEcccccch----hHH
Q 036185 946 DHCIVLEGDNRFTAP-------KGVANRVCLGLIP--------TSENSWVTAVQALRSEGGTLHVHGNVKDSE----EKL 1006 (1057)
Q Consensus 946 ~~v~~~~~D~~~~~~-------~~~~D~Vil~~~P--------~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~----~~~ 1006 (1057)
..+.++.+|+.+.++ ...||+|+++..- .....+..+.++|+ +||+|.+.......- ...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk-pGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR-PGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE-EEEEEEEEEEESCCEEEETTEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC-CCCEEEEEEecCcceEEcCCee
Confidence 025678889987332 2459999987521 12344666667777 799988864322100 000
Q ss_pred H--HHHHHHHHHHHHHhcCCc
Q 036185 1007 W--AEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 1007 ~--~~~~~~~i~~~~~~~g~~ 1025 (1057)
+ ...-.+.+.+++++.|+.
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~ 249 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYK 249 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEE
T ss_pred eeeccCCHHHHHHHHHHcCCe
Confidence 0 000134566777888875
No 280
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.11 E-value=2.9e-06 Score=92.89 Aligned_cols=105 Identities=14% Similarity=0.118 Sum_probs=72.2
Q ss_pred HHhhc--cCCCCEEEEecCcccHhHHHHHHhCCC--cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCC-
Q 036185 888 RMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKA--RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKG- 962 (1057)
Q Consensus 888 r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a--~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~- 962 (1057)
++++. ..++++|||++||+|.++..++.+... .+|+|+|+++.+++.+++|. .++++++++|+.++....
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~~ 107 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGSI 107 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGGG
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhHh
Confidence 34443 467899999999999999999843211 23999999999999999993 347999999998864211
Q ss_pred ------CccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 963 ------VANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 963 ------~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
..+.||.|+ |+... -....++|....++-..+-..
T Consensus 108 ~~~~~~~~~~vv~Nl-PY~is-s~il~~ll~~~~~~~~~~~m~ 148 (279)
T 3uzu_A 108 ARPGDEPSLRIIGNL-PYNIS-SPLLFHLMSFAPVVIDQHFML 148 (279)
T ss_dssp SCSSSSCCEEEEEEC-CHHHH-HHHHHHHGGGGGGEEEEEEEE
T ss_pred cccccCCceEEEEcc-Ccccc-HHHHHHHHhccCCccEEEEEe
Confidence 235788888 86533 233345554334444444443
No 281
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.11 E-value=6.9e-06 Score=93.12 Aligned_cols=126 Identities=19% Similarity=0.176 Sum_probs=88.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++++....+++++|+ |..++ +++++..++.++++++.+|.++.++ .||.|++...-
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p--~~D~v~~~~vl 257 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP--HADVHVLKRIL 257 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC--CCSEEEEESCG
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC--CCcEEEEehhc
Confidence 4678999999999999999986555557999999 55555 5555545666789999999986555 79999986432
Q ss_pred C----C--hhHHHHHHHHhhCCCcEEEEEcccccchhHH----HHH-----------HHHHHHHHHHHhcCCc
Q 036185 974 T----S--ENSWVTAVQALRSEGGTLHVHGNVKDSEEKL----WAE-----------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 974 ~----~--~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~----~~~-----------~~~~~i~~~~~~~g~~ 1025 (1057)
+ . ...+..+.++|+ +||.|.+.+......... ..+ ...+.+.+++++.|+.
T Consensus 258 h~~~d~~~~~~L~~~~~~Lk-pgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~ 329 (348)
T 3lst_A 258 HNWGDEDSVRILTNCRRVMP-AHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLR 329 (348)
T ss_dssp GGSCHHHHHHHHHHHHHTCC-TTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEE
T ss_pred cCCCHHHHHHHHHHHHHhcC-CCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCc
Confidence 2 2 355777777787 799999888754322100 000 1134677888888864
No 282
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.10 E-value=3.8e-06 Score=90.24 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=65.1
Q ss_pred HHHhhc--cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC-CC
Q 036185 887 LRMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK-GV 963 (1057)
Q Consensus 887 ~r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~-~~ 963 (1057)
.+++.. ..++++|||++||+|.++..++. .+ .+|+|+|+++.+++.+++|++.. ++++++++|+.++... ..
T Consensus 20 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~-~~-~~v~~vD~~~~~~~~a~~~~~~~---~~v~~~~~D~~~~~~~~~~ 94 (244)
T 1qam_A 20 DKIMTNIRLNEHDNIFEIGSGKGHFTLELVQ-RC-NFVTAIEIDHKLCKTTENKLVDH---DNFQVLNKDILQFKFPKNQ 94 (244)
T ss_dssp HHHHTTCCCCTTCEEEEECCTTSHHHHHHHH-HS-SEEEEECSCHHHHHHHHHHTTTC---CSEEEECCCGGGCCCCSSC
T ss_pred HHHHHhCCCCCCCEEEEEeCCchHHHHHHHH-cC-CeEEEEECCHHHHHHHHHhhccC---CCeEEEEChHHhCCcccCC
Confidence 345544 35788999999999999999984 33 67999999999999999998642 3799999999886432 22
Q ss_pred ccEEEECCCCCCh
Q 036185 964 ANRVCLGLIPTSE 976 (1057)
Q Consensus 964 ~D~Vil~~~P~~~ 976 (1057)
...|+.|+ |+..
T Consensus 95 ~~~vv~nl-Py~~ 106 (244)
T 1qam_A 95 SYKIFGNI-PYNI 106 (244)
T ss_dssp CCEEEEEC-CGGG
T ss_pred CeEEEEeC-Cccc
Confidence 23688888 7753
No 283
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.10 E-value=5.2e-06 Score=91.07 Aligned_cols=92 Identities=15% Similarity=0.046 Sum_probs=67.7
Q ss_pred cCCCCEEEEecC------cccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEE-EeCCccccCCCCCc
Q 036185 893 DCKDEVIVDLFA------GIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIV-LEGDNRFTAPKGVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~------G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~-~~~D~~~~~~~~~~ 964 (1057)
+.+|.+|||++| |.|. . .+++..+ ..+|+|+|++|. +. ++++ +++|+.+......|
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs-~-~~a~~~~~~~~V~gvDis~~-------------v~-~v~~~i~gD~~~~~~~~~f 124 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT-A-VLRQWLPTGTLLVDSDLNDF-------------VS-DADSTLIGDCATVHTANKW 124 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH-H-HHHHHSCTTCEEEEEESSCC-------------BC-SSSEEEESCGGGCCCSSCE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH-H-HHHHHcCCCCEEEEEECCCC-------------CC-CCEEEEECccccCCccCcc
Confidence 467899999999 5577 3 3343444 357999999998 12 5778 99999886545679
Q ss_pred cEEEECCCCCC---------------hhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 965 NRVCLGLIPTS---------------ENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 965 D~Vil~~~P~~---------------~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
|+|+.|+.|.. ...+..+.+.|+ +||++.+..+...
T Consensus 125 D~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lk-pGG~~v~~~~~~~ 175 (290)
T 2xyq_A 125 DLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHS 175 (290)
T ss_dssp EEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSS
T ss_pred cEEEEcCCccccccccccccchHHHHHHHHHHHHHhcC-CCcEEEEEEeccC
Confidence 99999974432 145677778888 7999998766553
No 284
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.09 E-value=1.2e-05 Score=91.79 Aligned_cols=123 Identities=15% Similarity=0.160 Sum_probs=85.2
Q ss_pred CEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC---------CCCccEE
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---------KGVANRV 967 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---------~~~~D~V 967 (1057)
-+|+|||||+|++++.+. .+|...|.|+|+++.|++..+.|. . +..++++|+.++.. ...+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~-~aG~~~v~avE~d~~a~~t~~~N~-----~-~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAA-RAGFDVKMAVEIDQHAINTHAINF-----P-RSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHH-HHTCEEEEEECSCHHHHHHHHHHC-----T-TSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHH-HCCCcEEEEEeCCHHHHHHHHHhC-----C-CCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 379999999999999886 678888999999999999999884 2 36788999987642 3468999
Q ss_pred EECCCC---CC-----------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCce-eee
Q 036185 968 CLGLIP---TS-----------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRW-EVT 1029 (1057)
Q Consensus 968 il~~~P---~~-----------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~ 1029 (1057)
+.+| | .+ ...+...+++++.-.-.+.+.+|++..-... ...+.+.|. ..++.|+.+ ...
T Consensus 76 ~ggp-PCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s~~-~~~~~~~i~-~l~~~GY~v~~~~ 149 (376)
T 3g7u_A 76 IGGP-PCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQEK-YSGIRNKAF-NLVSGDYDILDPI 149 (376)
T ss_dssp EECC-CCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTCGG-GHHHHHHHH-HHHHTTEEECCCE
T ss_pred EecC-CCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhccC-cHHHHHHHH-HHHcCCCccCcEE
Confidence 9999 6 11 1224444555531223577888887531111 123455566 677889876 443
No 285
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.09 E-value=2.2e-06 Score=93.17 Aligned_cols=103 Identities=11% Similarity=-0.108 Sum_probs=70.7
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH-HcCCCccEEEE--eCCccccCCCCCccEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ-ANSVSDHCIVL--EGDNRFTAPKGVANRVC 968 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~-~N~~~~~v~~~--~~D~~~~~~~~~~D~Vi 968 (1057)
.+.+|.+|||++||+|.|+..++. . .+|+|||++|. +..++++.. .+....++.++ ++|+.++. ...||.|+
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~-~--~~V~gvD~s~m-~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~ 145 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAAS-R--PHVMDVRAYTL-GVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIM 145 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHT-S--TTEEEEEEECC-CCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEE
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHH-c--CcEEEEECchh-hhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEE
Confidence 356789999999999999999883 3 56999999993 222222110 01111268999 99999864 56799999
Q ss_pred ECCCCCC-------h---hHHHHHHHHhhCCCc--EEEEEcccc
Q 036185 969 LGLIPTS-------E---NSWVTAVQALRSEGG--TLHVHGNVK 1000 (1057)
Q Consensus 969 l~~~P~~-------~---~~~~~a~~~l~~~gg--~l~~~~~~~ 1000 (1057)
++..... . ..+..+.++|+ +|| .+.+-.+.+
T Consensus 146 sd~~~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 146 CDVGESSPKWSVESERTIKILELLEKWKV-KNPSADFVVKVLCP 188 (265)
T ss_dssp ECCCCCCSCHHHHHHHHHHHHHHHHHHHH-HCTTCEEEEEESCT
T ss_pred EeCcccCCccchhHHHHHHHHHHHHHHhc-cCCCeEEEEEeCCC
Confidence 9863111 0 24566668888 699 888866653
No 286
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.08 E-value=4.3e-06 Score=90.09 Aligned_cols=82 Identities=20% Similarity=0.193 Sum_probs=63.4
Q ss_pred HHhhc--cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCC--C
Q 036185 888 RMARL--DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKG--V 963 (1057)
Q Consensus 888 r~~~~--~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~--~ 963 (1057)
++++. ..++++|||++||+|.++..++ ..++.+|+|+|+++.+++.+++| . ..+++++++|+.++.... .
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~lt~~L~-~~~~~~v~avEid~~~~~~~~~~---~--~~~v~~i~~D~~~~~~~~~~~ 95 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGNLTKVLL-QHPLKKLYVIELDREMVENLKSI---G--DERLEVINEDASKFPFCSLGK 95 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHHHHHHHT-TSCCSEEEEECCCHHHHHHHTTS---C--CTTEEEECSCTTTCCGGGSCS
T ss_pred HHHHhcCCCCcCEEEEEcCchHHHHHHHH-HcCCCeEEEEECCHHHHHHHHhc---c--CCCeEEEEcchhhCChhHccC
Confidence 44443 4578899999999999999998 34567899999999999999988 2 237999999998764211 1
Q ss_pred ccEEEECCCCCCh
Q 036185 964 ANRVCLGLIPTSE 976 (1057)
Q Consensus 964 ~D~Vil~~~P~~~ 976 (1057)
...|+.|+ |+..
T Consensus 96 ~~~vv~Nl-Py~i 107 (249)
T 3ftd_A 96 ELKVVGNL-PYNV 107 (249)
T ss_dssp SEEEEEEC-CTTT
T ss_pred CcEEEEEC-chhc
Confidence 23778887 8753
No 287
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.07 E-value=1.9e-06 Score=94.27 Aligned_cols=103 Identities=12% Similarity=-0.074 Sum_probs=71.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH-HcCCCccEEEE--eCCccccCCCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ-ANSVSDHCIVL--EGDNRFTAPKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~-~N~~~~~v~~~--~~D~~~~~~~~~~D~Vil 969 (1057)
+.+|.+|||++||+|.|+..+|. . .+|+|||+++ .+..++++.. .+....++.++ ++|+.++. ...||+|++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~-~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvs 154 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAAS-Q--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLC 154 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHT-S--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHH-c--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEE
Confidence 56789999999999999999883 3 4699999999 3333322211 11122268999 99998854 567999999
Q ss_pred CCCCCC-------h---hHHHHHHHHhhCCCc--EEEEEccccc
Q 036185 970 GLIPTS-------E---NSWVTAVQALRSEGG--TLHVHGNVKD 1001 (1057)
Q Consensus 970 ~~~P~~-------~---~~~~~a~~~l~~~gg--~l~~~~~~~~ 1001 (1057)
+..... . ..+..+.++|+ +|| .+.+-.+.+.
T Consensus 155 d~~~~~~~~~~d~~~~l~~L~~~~r~Lk-pGG~~~~v~~~~~~~ 197 (276)
T 2wa2_A 155 DIGESNPTAAVEASRTLTVLNVISRWLE-YNQGCGFCVKVLNPY 197 (276)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHH-HSTTCEEEEEESCCC
T ss_pred CCCcCCCchhhhHHHHHHHHHHHHHHhc-cCCCcEEEEEeCCCC
Confidence 863111 0 23566668888 699 8887666643
No 288
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.99 E-value=1.7e-05 Score=83.04 Aligned_cols=104 Identities=14% Similarity=0.055 Sum_probs=76.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
..++.+|||++||+|.++..++ .+|+++|+++. ++.++.+|+.+... ...||+|++..
T Consensus 65 ~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~----------------~~~~~~~d~~~~~~~~~~fD~v~~~~ 123 (215)
T 2zfu_A 65 RPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL----------------DPRVTVCDMAQVPLEDESVDVAVFCL 123 (215)
T ss_dssp SCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS----------------STTEEESCTTSCSCCTTCEEEEEEES
T ss_pred cCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC----------------CceEEEeccccCCCCCCCEeEEEEeh
Confidence 3567899999999999997653 46999999998 35678899887532 45799999875
Q ss_pred CC---CChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 972 IP---TSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~P---~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
.- .....+..+.++|+ +||++.+.+...... -.+.+.+++++.|+.
T Consensus 124 ~l~~~~~~~~l~~~~~~L~-~gG~l~i~~~~~~~~-------~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 124 SLMGTNIRDFLEEANRVLK-PGGLLKVAEVSSRFE-------DVRTFLRAVTKLGFK 172 (215)
T ss_dssp CCCSSCHHHHHHHHHHHEE-EEEEEEEEECGGGCS-------CHHHHHHHHHHTTEE
T ss_pred hccccCHHHHHHHHHHhCC-CCeEEEEEEcCCCCC-------CHHHHHHHHHHCCCE
Confidence 42 23556777788887 799999987665321 134556667778864
No 289
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.96 E-value=6.6e-06 Score=91.34 Aligned_cols=101 Identities=15% Similarity=0.033 Sum_probs=70.0
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEec----CHHHHHHHHHHHHHcCC-CccEEEEeC-CccccCCCCCcc
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEW----NPCAVEALKHNLQANSV-SDHCIVLEG-DNRFTAPKGVAN 965 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~----n~~ai~~~~~N~~~N~~-~~~v~~~~~-D~~~~~~~~~~D 965 (1057)
.+.+|.+|||++||+|.++..+|+ . .+|+|||+ ++..++.+. .+.. .+++.++++ |+.... ...||
T Consensus 79 ~~~~g~~VLDlGcG~G~~s~~la~-~--~~V~gvD~~~~~~~~~~~~~~----~~~~~~~~v~~~~~~D~~~l~-~~~fD 150 (305)
T 2p41_A 79 LVTPEGKVVDLGCGRGGWSYYCGG-L--KNVREVKGLTKGGPGHEEPIP----MSTYGWNLVRLQSGVDVFFIP-PERCD 150 (305)
T ss_dssp SSCCCEEEEEETCTTSHHHHHHHT-S--TTEEEEEEECCCSTTSCCCCC----CCSTTGGGEEEECSCCTTTSC-CCCCS
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHh-c--CCEEEEeccccCchhHHHHHH----hhhcCCCCeEEEeccccccCC-cCCCC
Confidence 356789999999999999999883 3 46999999 554332111 1222 136999999 988763 45799
Q ss_pred EEEECCCCCC-------h---hHHHHHHHHhhCCCcEEEEEccccc
Q 036185 966 RVCLGLIPTS-------E---NSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 966 ~Vil~~~P~~-------~---~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
+|+++..++. . ..+..+.++|+ +||.+.+-.+...
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~Lk-pGG~~v~kv~~~~ 195 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLS-NNTQFCVKVLNPY 195 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCEEEEEESCCC
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhC-CCCEEEEEeCCCC
Confidence 9999875531 0 23555567777 7998888666553
No 290
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.95 E-value=8e-06 Score=85.95 Aligned_cols=94 Identities=16% Similarity=0.044 Sum_probs=72.1
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEEC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCLG 970 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil~ 970 (1057)
.++.+|||++||+|.++..++. .+ .+|+++|+++.+++.+++++ ..++.+|+.+.. +...||.|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~-~~-~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKE-NG-TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHT-TT-CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHh-cC-CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCCCCCccCEEEEC
Confidence 5788999999999999999984 34 67999999999999998764 257889987642 24679999986
Q ss_pred CC----CCChhHHHHHHHHhhCCCcEEEEEcc
Q 036185 971 LI----PTSENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 971 ~~----P~~~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
.. +.....+..+.++|+ +||++.+...
T Consensus 101 ~~l~~~~~~~~~l~~~~~~L~-~gG~l~~~~~ 131 (230)
T 3cc8_A 101 DVLEHLFDPWAVIEKVKPYIK-QNGVILASIP 131 (230)
T ss_dssp SCGGGSSCHHHHHHHTGGGEE-EEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcC-CCCEEEEEeC
Confidence 42 333555666667777 6998888654
No 291
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.94 E-value=3.5e-05 Score=86.20 Aligned_cols=124 Identities=21% Similarity=0.311 Sum_probs=84.7
Q ss_pred CCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEECCCC
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLGLIP 973 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~~P 973 (1057)
+-+|+|||||+|++++.+. .+|+..|+++|+++.|++..+.|... . . ++|+.++.. -..+|+|+.+| |
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~-~aG~~~v~~~e~d~~a~~t~~~N~~~--~---~---~~Di~~~~~~~~~~~D~l~~gp-P 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALE-SCGAECVYSNEWDKYAQEVYEMNFGE--K---P---EGDITQVNEKTIPDHDILCAGF-P 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHH-HTTCEEEEEECCCHHHHHHHHHHHSC--C---C---BSCGGGSCGGGSCCCSEEEEEC-C
T ss_pred CCcEEEECCCcCHHHHHHH-HCCCeEEEEEeCCHHHHHHHHHHcCC--C---C---cCCHHHcCHhhCCCCCEEEECC-C
Confidence 4689999999999999986 68899999999999999999999732 1 1 688887654 23589999998 6
Q ss_pred CC--------------h-hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeee
Q 036185 974 TS--------------E-NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTI 1030 (1057)
Q Consensus 974 ~~--------------~-~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 1030 (1057)
-- . ..+...+++++.-.-.+.+-+|++..--.. .....+.+.+..++.|+.+...+
T Consensus 81 CQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~~~-~~~~~~~i~~~l~~~GY~v~~~v 151 (327)
T 2c7p_A 81 CQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFASHD-NGNTLEVVKNTMNELDYSFHAKV 151 (327)
T ss_dssp CTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGTGG-GGHHHHHHHHHHHHTTBCCEEEE
T ss_pred CCCcchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHhcc-ccHHHHHHHHHHHhCCCEEEEEE
Confidence 21 0 124455555431122467888887531100 01235566677788898765443
No 292
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.90 E-value=1.3e-06 Score=94.02 Aligned_cols=77 Identities=9% Similarity=0.050 Sum_probs=63.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC--CCccEEEEC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK--GVANRVCLG 970 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~--~~~D~Vil~ 970 (1057)
..++++|||++||+|.+++.++.. + .+|+|+|+++.+++.+++|++ . .++++++++|+.++... ..| .|+.|
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~-~-~~v~~id~~~~~~~~a~~~~~--~-~~~v~~~~~D~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKI-S-KQVTSIELDSHLFNLSSEKLK--L-NTRVTLIHQDILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHH-S-SEEEESSSSCSSSSSSSCTTT--T-CSEEEECCSCCTTTTCCCSSEE-EEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHh-C-CeEEEEECCHHHHHHHHHHhc--c-CCceEEEECChhhcCcccCCCc-EEEEe
Confidence 457889999999999999999843 4 679999999999999999886 2 24799999999886432 457 88889
Q ss_pred CCCCCh
Q 036185 971 LIPTSE 976 (1057)
Q Consensus 971 ~~P~~~ 976 (1057)
| |+..
T Consensus 101 ~-Py~~ 105 (245)
T 1yub_A 101 I-PYHL 105 (245)
T ss_dssp C-CSSS
T ss_pred C-Cccc
Confidence 8 7653
No 293
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.89 E-value=2.2e-05 Score=95.04 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=64.2
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---CCCCccEEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---PKGVANRVCL 969 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~~~~~D~Vil 969 (1057)
..++-+|||++||.|.++.++| +.|+ .|+|||.++.+|+.|+..+..++.- ++.+.++|+.++. ....||+|++
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la-~~ga-~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLA-SKGA-TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHH-HTTC-EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHH-hCCC-EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhccCCCccEEEE
Confidence 3456799999999999999998 5676 5999999999999999999998854 6999999998874 2457999976
Q ss_pred C
Q 036185 970 G 970 (1057)
Q Consensus 970 ~ 970 (1057)
-
T Consensus 141 ~ 141 (569)
T 4azs_A 141 L 141 (569)
T ss_dssp E
T ss_pred C
Confidence 4
No 294
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=97.88 E-value=0.0001 Score=83.50 Aligned_cols=128 Identities=15% Similarity=0.100 Sum_probs=90.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
....+|+|++||+|.+++.++++....+++..|+ |..++.+++++...+ .+||+++.+|.++... ..+|.|++.-+-
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-~~~D~~~~~~vl 254 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-PEADLYILARVL 254 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSCC-CCCSEEEEESSG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCCC-CCceEEEeeeec
Confidence 4567999999999999999997665567888887 999999999987655 4589999999986532 358999885433
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcccccchh-HHHH---H------------HHHHHHHHHHHhcCCc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNVKDSEE-KLWA---E------------HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~-~~~~---~------------~~~~~i~~~~~~~g~~ 1025 (1057)
+. ...+..+.++|+ +||.|.+.+..-..+. ..+. . +..+.+++++++.|++
T Consensus 255 h~~~d~~~~~iL~~~~~al~-pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~ 327 (353)
T 4a6d_A 255 HDWADGKCSHLLERIYHTCK-PGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFR 327 (353)
T ss_dssp GGSCHHHHHHHHHHHHHHCC-TTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCE
T ss_pred ccCCHHHHHHHHHHHHhhCC-CCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCc
Confidence 32 234667777777 6888888776532211 1110 1 1134677888899975
No 295
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.88 E-value=5.5e-05 Score=86.48 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=74.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++.+....+++++|+ |.+++.+++ .. +++++.+|.++.++. ||.|++...-
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~~~~~--~D~v~~~~~l 277 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LS-GIEHVGGDMFASVPQ--GDAMILKAVC 277 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CT-TEEEEECCTTTCCCC--EEEEEEESSG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cC-CCEEEeCCcccCCCC--CCEEEEeccc
Confidence 4678999999999999999986544457999999 999987764 23 699999999874443 9999986532
Q ss_pred C----Ch--hHHHHHHHHhhCCCcEEEEEcccc
Q 036185 974 T----SE--NSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 974 ~----~~--~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+ .. ..+..+.++|+ +||.|.+.+...
T Consensus 278 h~~~d~~~~~~l~~~~~~L~-pgG~l~i~e~~~ 309 (372)
T 1fp1_D 278 HNWSDEKCIEFLSNCHKALS-PNGKVIIVEFIL 309 (372)
T ss_dssp GGSCHHHHHHHHHHHHHHEE-EEEEEEEEEEEE
T ss_pred ccCCHHHHHHHHHHHHHhcC-CCCEEEEEEecc
Confidence 2 22 55777778887 699999887653
No 296
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.87 E-value=0.00011 Score=83.82 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=74.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.+++.++++....+++++|+ |.+++.++++ .+++++.+|.++.++. .|.|++...-
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~~~p~--~D~v~~~~vl 271 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFDGVPK--GDAIFIKWIC 271 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC--CSEEEEESCG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCCCCCC--CCEEEEechh
Confidence 4568999999999999999986555557999999 9988876642 3799999999875553 3999986544
Q ss_pred C--C----hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 974 T--S----ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 974 ~--~----~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+ . ...+..+.++|+ +||.|.+.+...
T Consensus 272 h~~~~~~~~~~l~~~~~~L~-pgG~l~i~e~~~ 303 (368)
T 3reo_A 272 HDWSDEHCLKLLKNCYAALP-DHGKVIVAEYIL 303 (368)
T ss_dssp GGBCHHHHHHHHHHHHHHSC-TTCEEEEEECCC
T ss_pred hcCCHHHHHHHHHHHHHHcC-CCCEEEEEEecc
Confidence 3 1 244677777887 799999988764
No 297
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.84 E-value=6.7e-06 Score=88.62 Aligned_cols=76 Identities=17% Similarity=0.131 Sum_probs=60.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcE--EEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC------CCc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARL--VYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK------GVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~--V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~------~~~ 964 (1057)
..++++|||++||+|.++. ++ + + .+ |+|+|+++.+++.+++|+..+ ++++++++|+.++... ...
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~-~-~-~~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~~~~~~~~~ 91 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PV-G-E-RLDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGELAEKMGQP 91 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HH-H-T-TCSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHHHHHHHTSC
T ss_pred CCCcCEEEEECCCCcHHHH-hh-h-C-CCCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHHhhcccCCc
Confidence 4678899999999999999 65 3 3 45 999999999999999987543 3799999999885321 134
Q ss_pred cEEEECCCCCCh
Q 036185 965 NRVCLGLIPTSE 976 (1057)
Q Consensus 965 D~Vil~~~P~~~ 976 (1057)
|.|+.|+ |+..
T Consensus 92 ~~vvsNl-PY~i 102 (252)
T 1qyr_A 92 LRVFGNL-PYNI 102 (252)
T ss_dssp EEEEEEC-CTTT
T ss_pred eEEEECC-CCCc
Confidence 6888898 7653
No 298
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.80 E-value=0.00021 Score=77.97 Aligned_cols=106 Identities=10% Similarity=0.062 Sum_probs=85.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHH-HcC--C-CccEEEEeCCccccCC--CCCccEE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQ-ANS--V-SDHCIVLEGDNRFTAP--KGVANRV 967 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~-~N~--~-~~~v~~~~~D~~~~~~--~~~~D~V 967 (1057)
.+-++||=++.|.|..+-.+++.....+|+.||++|..++.+++-+. .|+ + +.|++++.+|++.++. ..+||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45689999999999999999866667899999999999999998753 232 2 2489999999999986 4679999
Q ss_pred EECCCCC---------ChhHHHHHHHHhhCCCcEEEEEccccc
Q 036185 968 CLGLIPT---------SENSWVTAVQALRSEGGTLHVHGNVKD 1001 (1057)
Q Consensus 968 il~~~P~---------~~~~~~~a~~~l~~~gg~l~~~~~~~~ 1001 (1057)
|+|+ +. +..++....++|+ +||++.+..-+..
T Consensus 162 i~D~-~dp~~~~~~L~t~eFy~~~~~~L~-p~Gv~v~q~~sp~ 202 (294)
T 3o4f_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLN-PGGIFVAQNGVCF 202 (294)
T ss_dssp EESC-CCCCCTTCCSSCCHHHHHHHHTEE-EEEEEEEEEEESS
T ss_pred EEeC-CCcCCCchhhcCHHHHHHHHHHhC-CCCEEEEecCCcc
Confidence 9997 32 2567888888888 7999988765543
No 299
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.77 E-value=4.2e-05 Score=91.33 Aligned_cols=97 Identities=10% Similarity=0.049 Sum_probs=70.1
Q ss_pred EeeCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhC--C-----------CcEEEEEecCHHHHHHHHHHHHHcC
Q 036185 877 MFSWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRA--K-----------ARLVYACEWNPCAVEALKHNLQANS 943 (1057)
Q Consensus 877 ~f~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~--~-----------a~~V~avD~n~~ai~~~~~N~~~N~ 943 (1057)
||.|+...+-+--+-....+++|+|.+||+|+|-+.++... . -..++|+|+++.++..++-|+-+.+
T Consensus 199 fyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg 278 (530)
T 3ufb_A 199 FYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG 278 (530)
T ss_dssp CCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT
T ss_pred ECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC
Confidence 45565554322211224568899999999999988775321 0 1359999999999999999999999
Q ss_pred CCccEEEEeCCccccC-----CCCCccEEEECCCCCC
Q 036185 944 VSDHCIVLEGDNRFTA-----PKGVANRVCLGLIPTS 975 (1057)
Q Consensus 944 ~~~~v~~~~~D~~~~~-----~~~~~D~Vil~~~P~~ 975 (1057)
++ .-.+.++|..... ...+||+|+.|| |..
T Consensus 279 ~~-~~~I~~~dtL~~~~~~~~~~~~fD~Il~NP-Pf~ 313 (530)
T 3ufb_A 279 LE-YPRIDPENSLRFPLREMGDKDRVDVILTNP-PFG 313 (530)
T ss_dssp CS-CCEEECSCTTCSCGGGCCGGGCBSEEEECC-CSS
T ss_pred Cc-cccccccccccCchhhhcccccceEEEecC-CCC
Confidence 87 3567888876532 134699999999 864
No 300
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.74 E-value=0.00015 Score=78.11 Aligned_cols=134 Identities=18% Similarity=0.088 Sum_probs=87.2
Q ss_pred CCEEEEEecceeEeeCCCHHHHHHHh--------h-c---cCCCCEEEEecCcccHhHHHHHHhC------C------Cc
Q 036185 865 NGILYSFDATKCMFSWGNLSEKLRMA--------R-L---DCKDEVIVDLFAGIGYFVLPFLVRA------K------AR 920 (1057)
Q Consensus 865 ~gi~~~~d~~~~~f~~~~~~er~r~~--------~-~---~~~g~~VlDlf~G~G~fsl~~a~~~------~------a~ 920 (1057)
+|..+.-+....||+.....+..+-. . . ..++.+|||+++|+|+-++.++... . ..
T Consensus 18 ~gt~~s~~f~e~y~s~~~~l~E~~~vF~~~~~lp~r~~~~~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l 97 (257)
T 2qy6_A 18 EGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEARFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRL 97 (257)
T ss_dssp TCCEEETTTTEESSCTTTHHHHHHHHHHHHTTHHHHGGGCSSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEE
T ss_pred CCCEecCccCccccCCCCHHHHHHHHHHhccchHHHHHhcCCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCccee
Confidence 35544445556777765433322211 0 0 2345799999999999998866321 2 14
Q ss_pred EEEEEecCH---HHH-----------HHHHHHHHHc----------CCC---ccEEEEeCCccccCCC------CCccEE
Q 036185 921 LVYACEWNP---CAV-----------EALKHNLQAN----------SVS---DHCIVLEGDNRFTAPK------GVANRV 967 (1057)
Q Consensus 921 ~V~avD~n~---~ai-----------~~~~~N~~~N----------~~~---~~v~~~~~D~~~~~~~------~~~D~V 967 (1057)
+++++|..| +.+ +.++++++.- .++ .+++++.||+.+.++. ..||.|
T Consensus 98 ~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~i 177 (257)
T 2qy6_A 98 HFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAW 177 (257)
T ss_dssp EEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEE
Confidence 799999988 333 3566666530 111 3688999999997762 169999
Q ss_pred EECCC-CC------ChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 968 CLGLI-PT------SENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 968 il~~~-P~------~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
++|++ |. ...++....++|+ +||+|..|+..
T Consensus 178 flD~fsp~~~p~lw~~~~l~~l~~~L~-pGG~l~tysaa 215 (257)
T 2qy6_A 178 FLDGFAPAKNPDMWTQNLFNAMARLAR-PGGTLATFTSA 215 (257)
T ss_dssp EECSSCTTTCGGGCCHHHHHHHHHHEE-EEEEEEESCCB
T ss_pred EECCCCcccChhhcCHHHHHHHHHHcC-CCcEEEEEeCC
Confidence 99974 32 3456777777887 79999987764
No 301
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.74 E-value=6.8e-05 Score=84.22 Aligned_cols=123 Identities=18% Similarity=0.264 Sum_probs=83.3
Q ss_pred EEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC--CCCccEEEECCCCC-
Q 036185 898 VIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP--KGVANRVCLGLIPT- 974 (1057)
Q Consensus 898 ~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~--~~~~D~Vil~~~P~- 974 (1057)
+|+|||||+|+|++-+- .+|...|.|+|+++.|++..+.|. . -.++.+|+.++.. -..+|+++.+| |=
T Consensus 2 kvidLFsG~GG~~~G~~-~aG~~~v~a~e~d~~a~~ty~~N~-----~--~~~~~~DI~~i~~~~~~~~D~l~ggp-PCQ 72 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQ-KAGFRIICANEYDKSIWKTYESNH-----S--AKLIKGDISKISSDEFPKCDGIIGGP-PSQ 72 (331)
T ss_dssp EEEEESCTTCHHHHHHH-HTTCEEEEEEECCTTTHHHHHHHC-----C--SEEEESCGGGCCGGGSCCCSEEECCC-CGG
T ss_pred eEEEeCcCccHHHHHHH-HCCCEEEEEEeCCHHHHHHHHHHC-----C--CCcccCChhhCCHhhCCcccEEEecC-CCC
Confidence 69999999999998774 688888999999999999999884 2 2578899988754 23589999888 61
Q ss_pred --C------------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeee
Q 036185 975 --S------------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTI 1030 (1057)
Q Consensus 975 --~------------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 1030 (1057)
| ...+...+++++.-.-.+.+-||++..--.. .....+.+.+..++.|+.+...+
T Consensus 73 ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~~-~~~~~~~i~~~l~~~GY~v~~~v 141 (331)
T 3ubt_Y 73 SWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQR-HNKAVQEFIQEFDNAGYDVHIIL 141 (331)
T ss_dssp GTEETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGCT-TSHHHHHHHHHHHHHTEEEEEEE
T ss_pred CcCCCCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeeccccccc-ccchhhhhhhhhccCCcEEEEEe
Confidence 0 1224455555531122467788887431100 01234556666677898765444
No 302
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.73 E-value=3.4e-05 Score=84.11 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=69.5
Q ss_pred CCCEEEEecCcccH----hHHHHHHhCC----CcEEEEEecCHHHHHHHHHHHH----H-------------------cC
Q 036185 895 KDEVIVDLFAGIGY----FVLPFLVRAK----ARLVYACEWNPCAVEALKHNLQ----A-------------------NS 943 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~----fsl~~a~~~~----a~~V~avD~n~~ai~~~~~N~~----~-------------------N~ 943 (1057)
++.+|||++||+|- +++.++...+ ..+|+|+|+|+.|++.|++|+- . ++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 5655553322 2379999999999999999851 0 11
Q ss_pred -------CCccEEEEeCCcccc-CC-CCCccEEEECC-CCCC-----hhHHHHHHHHhhCCCcEEEE
Q 036185 944 -------VSDHCIVLEGDNRFT-AP-KGVANRVCLGL-IPTS-----ENSWVTAVQALRSEGGTLHV 995 (1057)
Q Consensus 944 -------~~~~v~~~~~D~~~~-~~-~~~~D~Vil~~-~P~~-----~~~~~~a~~~l~~~gg~l~~ 995 (1057)
+..+|.|.++|..+. .+ ...||+|++-. +.+. ...+....+.|+ +||+|.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~-pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLK-PDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEE-EEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 113699999999873 22 45799999843 2222 233555556666 7999987
No 303
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.72 E-value=9.6e-05 Score=82.78 Aligned_cols=120 Identities=20% Similarity=0.258 Sum_probs=86.4
Q ss_pred EEEEecCcccHhHHHHHHhCCC--cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEEEECC
Q 036185 898 VIVDLFAGIGYFVLPFLVRAKA--RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRVCLGL 971 (1057)
Q Consensus 898 ~VlDlf~G~G~fsl~~a~~~~a--~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~Vil~~ 971 (1057)
+|+|||||+|++++.+. .+|. ..|.|+|+++.|++..+.|.. ...++++|+.++.. ...+|+++.+|
T Consensus 5 ~~idLFaG~GG~~~G~~-~aG~~~~~v~a~e~d~~a~~ty~~N~~------~~~~~~~DI~~~~~~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWK-ESGLDGEIVAAVDINTVANSVYKHNFP------ETNLLNRNIQQLTPQVIKKWNVDTILMSP 77 (333)
T ss_dssp EEEEETCTTTHHHHHHH-HHTCSEEEEEEECCCHHHHHHHHHHCT------TSCEECCCGGGCCHHHHHHTTCCEEEECC
T ss_pred EEEEECcCccHHHHHHH-HcCCCceEEEEEeCCHHHHHHHHHhCC------CCceeccccccCCHHHhccCCCCEEEecC
Confidence 69999999999999875 5675 679999999999999998852 23467899887753 23589999998
Q ss_pred CCC---C------------hhHHHHHHHHhhCCC-cEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeee
Q 036185 972 IPT---S------------ENSWVTAVQALRSEG-GTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVT 1029 (1057)
Q Consensus 972 ~P~---~------------~~~~~~a~~~l~~~g-g~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~ 1029 (1057)
|= + ...+...+++++.-. -.+.+-+|++...-. +..+.|.+..++.|+.+...
T Consensus 78 -PCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P~~~vlENV~gl~~~----~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 78 -PCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNVDYILMENVKGFENS----TVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp -CCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTCCEEEEEECTTGGGS----HHHHHHHHHHHHTTEEEEEE
T ss_pred -CCcchhhhhhccCCcCcccccHHHHHHHHHHhcCCCEEEEecchhhhhh----hHHHHHHHHHHhCCCeEEEE
Confidence 61 1 122666777775323 578889999864321 23456677778889876543
No 304
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.72 E-value=0.00033 Score=79.29 Aligned_cols=122 Identities=19% Similarity=0.134 Sum_probs=86.9
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLI 972 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~ 972 (1057)
..++.+|||++||+|.++..++++....+++++|+ |.+++.+++ .. +++++.+|.++.++ .||.|++...
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~~~p--~~D~v~~~~~ 255 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SN-NLTYVGGDMFTSIP--NADAVLLKYI 255 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BT-TEEEEECCTTTCCC--CCSEEEEESC
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CC-CcEEEeccccCCCC--CccEEEeehh
Confidence 34678999999999999999985544457999999 999987765 23 59999999987444 3999998653
Q ss_pred CC----Ch--hHHHHHHHHhhCC---CcEEEEEcccccchhH-------HHHHHH-----------HHHHHHHHHhcCCc
Q 036185 973 PT----SE--NSWVTAVQALRSE---GGTLHVHGNVKDSEEK-------LWAEHV-----------SKSIYEIARSEGHR 1025 (1057)
Q Consensus 973 P~----~~--~~~~~a~~~l~~~---gg~l~~~~~~~~~~~~-------~~~~~~-----------~~~i~~~~~~~g~~ 1025 (1057)
-+ .. ..+..+.++|+ + ||.|.+.+........ ....++ .+.+.+++++.|+.
T Consensus 256 lh~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~ 334 (352)
T 1fp2_A 256 LHNWTDKDCLRILKKCKEAVT-NDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQ 334 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHHHS-GGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCC
T ss_pred hccCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCC
Confidence 32 22 55777778887 6 9999888876432210 000111 35677888889975
No 305
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.70 E-value=0.00012 Score=81.64 Aligned_cols=122 Identities=19% Similarity=0.126 Sum_probs=87.3
Q ss_pred CCEEEEecCcccHhHHHHHHhCC--CcEE-EEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----CCCccEEE
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAK--ARLV-YACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----KGVANRVC 968 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~--a~~V-~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----~~~~D~Vi 968 (1057)
.-+|+|||||+|++++.+. .+| +..| .|+|+++.|++..+.|... . ++++|+.++.. ...+|+++
T Consensus 10 ~~~vidLFaG~GG~~~G~~-~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-----~--~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYE-RSSININATFIPFDINEIANKIYSKNFKE-----E--VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp CEEEEEETCTTTHHHHHHH-HSSCCCCEEEEEECCCHHHHHHHHHHHCC-----C--CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CCEEEEECCChhHHHHHHH-HcCCCceEEEEEEECCHHHHHHHHHHCCC-----C--cccCChhhcCHHHhccCCCCEEE
Confidence 3479999999999999886 567 4678 8999999999999999631 1 56788887653 22589999
Q ss_pred ECCCC---C--C------------hhHHHHHHH-HhhCC--CcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceee
Q 036185 969 LGLIP---T--S------------ENSWVTAVQ-ALRSE--GGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEV 1028 (1057)
Q Consensus 969 l~~~P---~--~------------~~~~~~a~~-~l~~~--gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 1028 (1057)
.+| | . + ...+...++ +++.- ...+.+-||++...-. ...+.|.+..++.|+.+..
T Consensus 82 ggp-PCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~gl~~~----~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 82 MSP-PCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPLFKES----LVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp ECC-CCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGGGGGS----HHHHHHHHHHHHTTCEEEE
T ss_pred ecC-CccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhhhcCh----HHHHHHHHHHHhCCCEEEE
Confidence 998 6 2 1 022666777 66532 3567888998764321 2356677777888998654
Q ss_pred ee
Q 036185 1029 TI 1030 (1057)
Q Consensus 1029 ~~ 1030 (1057)
.+
T Consensus 157 ~v 158 (327)
T 3qv2_A 157 II 158 (327)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 306
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.69 E-value=0.00031 Score=79.97 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=73.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++++....+++++|+ |.+++.++++ .+++++.+|.++..+. .|.|++...-
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~D~~~~~p~--~D~v~~~~vl 269 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-------PGVTHVGGDMFKEVPS--GDTILMKWIL 269 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTTCCCC--CSEEEEESCG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-------CCeEEEeCCcCCCCCC--CCEEEehHHh
Confidence 4578999999999999999986555557999999 9888776642 4799999999884443 3999986544
Q ss_pred CC------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 974 TS------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 974 ~~------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+. ...+..+.++|+ +||.|.+.+...
T Consensus 270 h~~~d~~~~~~L~~~~~~L~-pgG~l~i~e~~~ 301 (364)
T 3p9c_A 270 HDWSDQHCATLLKNCYDALP-AHGKVVLVQCIL 301 (364)
T ss_dssp GGSCHHHHHHHHHHHHHHSC-TTCEEEEEECCB
T ss_pred ccCCHHHHHHHHHHHHHHcC-CCCEEEEEEecc
Confidence 31 244677777787 799999988764
No 307
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.66 E-value=2.2e-05 Score=91.15 Aligned_cols=125 Identities=13% Similarity=0.077 Sum_probs=81.8
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEE-eCCccccC-CCCCccEEEECC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVL-EGDNRFTA-PKGVANRVCLGL 971 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~-~~D~~~~~-~~~~~D~Vil~~ 971 (1057)
.++.+|||++||+|.++..++ ..+. +|+++|+++.+++.++++ ++.....++ .+++.... +...||+|++..
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~-~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~ 179 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQ-EAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAAN 179 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHH-HTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEES
T ss_pred CCCCEEEEecCCCCHHHHHHH-HcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECC
Confidence 468899999999999999988 3455 799999999999998876 444222222 23332221 145799999864
Q ss_pred C----CCChhHHHHHHHHhhCCCcEEEEEcccccchh-----HHH-HH----HHHHHHHHHHHhcCCc
Q 036185 972 I----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEE-----KLW-AE----HVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 972 ~----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~-----~~~-~~----~~~~~i~~~~~~~g~~ 1025 (1057)
. |.....+..+.++|+ +||++.+.......-. ..+ .+ .-.+.+.+++++.|+.
T Consensus 180 vl~h~~d~~~~l~~~~r~Lk-pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~ 246 (416)
T 4e2x_A 180 TLCHIPYVQSVLEGVDALLA-PDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFE 246 (416)
T ss_dssp CGGGCTTHHHHHHHHHHHEE-EEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEE
T ss_pred hHHhcCCHHHHHHHHHHHcC-CCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCE
Confidence 2 344677888888888 6999988643211000 000 00 0124677888888875
No 308
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.65 E-value=0.012 Score=62.36 Aligned_cols=196 Identities=12% Similarity=0.038 Sum_probs=124.9
Q ss_pred CCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCccc
Q 036185 340 SPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIF 419 (1057)
Q Consensus 340 ~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~ 419 (1057)
.+..-+-+.+...++.+|+-.|..+ .+.+.++|+.+++-..-. +++..-++.+.+..++++|+....+
T Consensus 17 hd~~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~~----- 84 (243)
T 3mbr_X 17 HDTTAFTEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWRN----- 84 (243)
T ss_dssp CCTTCCEEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESSS-----
T ss_pred CCCccccccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEeeC-----
Confidence 3444455677888999999998754 267999999999765543 4555556777888899999986543
Q ss_pred ceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCC-ceee
Q 036185 420 SSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHA-RFSH 498 (1057)
Q Consensus 420 ~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~-R~~h 498 (1057)
+.+++||+.+.+-..-- |.+..+.+++..+++||+.-| .+.++.+|+.|.+-..--..+..+.+ +.-.
T Consensus 85 ~~v~v~D~~tl~~~~ti-----~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lN 153 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARF-----RYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLN 153 (243)
T ss_dssp SEEEEEETTTTEEEEEE-----ECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred CEEEEEECCcCcEEEEE-----eCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEEccCCcccccce
Confidence 46999999887654322 223356777777778998754 45799999999765432111222222 2223
Q ss_pred EEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEE-eeccCCCCC------c--ccceEEEEe--CCEEEEEeCC
Q 036185 499 TMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKH-LKLNYVCKE------L--FVRSTANVV--DDDLIMIGGG 563 (1057)
Q Consensus 499 s~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~-v~~~~~~~~------~--~~~~~a~~~--~~~iyi~GGg 563 (1057)
-+...+++||+--- ..+++.+.|+++.+=.. +......+. + -.-.+.+.. ++++||.|=.
T Consensus 154 eLe~~~G~lyanvw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 154 ELEWVNGELLANVW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEETTEEEEEET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred eeEEeCCEEEEEEC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 45556889885432 35699999999976433 222211111 1 111344444 5789998853
No 309
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.58 E-value=0.00053 Score=76.76 Aligned_cols=125 Identities=15% Similarity=0.084 Sum_probs=84.7
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-CCCccEEEECC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-KGVANRVCLGL 971 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-~~~~D~Vil~~ 971 (1057)
+.+|.+||||+|..|+|+-.++ ..|+ +|+|||..|-+ ..+. .. .+|+++++|++.+.+ ...+|.|+.|.
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~-~rg~-~V~aVD~~~l~-----~~l~--~~-~~V~~~~~d~~~~~~~~~~~D~vvsDm 278 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLV-KRNM-WVYSVDNGPMA-----QSLM--DT-GQVTWLREDGFKFRPTRSNISWMVCDM 278 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHH-HTTC-EEEEECSSCCC-----HHHH--TT-TCEEEECSCTTTCCCCSSCEEEEEECC
T ss_pred CCCCCEEEEeCcCCCHHHHHHH-HCCC-EEEEEEhhhcC-----hhhc--cC-CCeEEEeCccccccCCCCCcCEEEEcC
Confidence 5789999999999999999887 4555 69999976522 1121 22 379999999999876 45799999999
Q ss_pred CCCChhHHHHHHHHhhC--CCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceee
Q 036185 972 IPTSENSWVTAVQALRS--EGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEV 1028 (1057)
Q Consensus 972 ~P~~~~~~~~a~~~l~~--~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~ 1028 (1057)
.+..........+.+.. .++.|..--...+.... ........+.+.....|+...+
T Consensus 279 ~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~-~l~~~~~~i~~~l~~~g~~~~l 336 (375)
T 4auk_A 279 VEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE-EVSHNLAYIQAQLDEHGINAQI 336 (375)
T ss_dssp SSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH-HHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCChHHhHHHHHHHHhccccceEEEEEEecccchHH-HHHHHHHHHHHHHHhcCcchhh
Confidence 88877766666666652 13454444333322221 1234455777777778876543
No 310
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.55 E-value=6.6e-05 Score=85.02 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=71.4
Q ss_pred cCCCCEEEEecCc------ccHhHHHHHHhC-CCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----
Q 036185 893 DCKDEVIVDLFAG------IGYFVLPFLVRA-KARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP----- 960 (1057)
Q Consensus 893 ~~~g~~VlDlf~G------~G~fsl~~a~~~-~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~----- 960 (1057)
..++.+|||++|| +|+.++.+++.. ...+|+++|+++.+. . . ..+++++++|+.+...
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~-~-~~rI~fv~GDa~dlpf~~~l~ 283 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V-D-ELRIRTIQGDQNDAEFLDRIA 283 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-C-BTTEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-c-CCCcEEEEecccccchhhhhh
Confidence 3467899999999 899999888542 345799999999972 1 2 2479999999987421
Q ss_pred --CCCccEEEECCCCCC---hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 961 --KGVANRVCLGLIPTS---ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 961 --~~~~D~Vil~~~P~~---~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
...||+|+.+..... ...+.++.++|+ +||++.+.+..
T Consensus 284 ~~d~sFDlVisdgsH~~~d~~~aL~el~rvLK-PGGvlVi~Dl~ 326 (419)
T 3sso_A 284 RRYGPFDIVIDDGSHINAHVRTSFAALFPHVR-PGGLYVIEDMW 326 (419)
T ss_dssp HHHCCEEEEEECSCCCHHHHHHHHHHHGGGEE-EEEEEEEECGG
T ss_pred cccCCccEEEECCcccchhHHHHHHHHHHhcC-CCeEEEEEecc
Confidence 357999999864322 344666777777 79999997765
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.47 E-value=0.00012 Score=79.16 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=42.3
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSV 944 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~ 944 (1057)
..+|++|||+|||+|..++.++ ..| .+++++|++|.+++.+++|++.|++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~-~~g-r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAK-KLG-RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHH-HTT-CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHH-HcC-CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 4689999999999999999887 444 5799999999999999999998875
No 312
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.46 E-value=0.00064 Score=77.10 Aligned_cols=96 Identities=17% Similarity=0.082 Sum_probs=73.2
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccEEEECCCC
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANRVCLGLIP 973 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~Vil~~~P 973 (1057)
.++.+|||++||+|.++..++++....+++++|+ |.+++.+++ .. +++++.+|.++..+ .||+|++..+-
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~~~~--~~D~v~~~~vl 261 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NE-NLNFVGGDMFKSIP--SADAVLLKWVL 261 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CS-SEEEEECCTTTCCC--CCSEEEEESCG
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CC-CcEEEeCccCCCCC--CceEEEEcccc
Confidence 4568999999999999999986544457999999 888876654 33 59999999987433 49999987543
Q ss_pred CC----h--hHHHHHHHHhhCC---CcEEEEEcccc
Q 036185 974 TS----E--NSWVTAVQALRSE---GGTLHVHGNVK 1000 (1057)
Q Consensus 974 ~~----~--~~~~~a~~~l~~~---gg~l~~~~~~~ 1000 (1057)
+. . ..+..+.++|+ + ||.|.+.+...
T Consensus 262 h~~~d~~~~~~l~~~~~~L~-p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 262 HDWNDEQSLKILKNSKEAIS-HKGKDGKVIIIDISI 296 (358)
T ss_dssp GGSCHHHHHHHHHHHHHHTG-GGGGGCEEEEEECEE
T ss_pred cCCCHHHHHHHHHHHHHhCC-CCCCCcEEEEEEecc
Confidence 31 2 55777777887 6 89888887754
No 313
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.32 E-value=0.0004 Score=74.78 Aligned_cols=96 Identities=20% Similarity=0.080 Sum_probs=72.2
Q ss_pred CCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC
Q 036185 880 WGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA 959 (1057)
Q Consensus 880 ~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~ 959 (1057)
+.+..|-...+. +.+|.++||+.||.|+.+..++.+ ..+|+|+|.+|.|++.+++ ++. ++++++++|..++.
T Consensus 8 pVLl~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~ 79 (285)
T 1wg8_A 8 PVLYQEALDLLA-VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLK 79 (285)
T ss_dssp CTTHHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHH
T ss_pred hHHHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHH
Confidence 445554444443 467889999999999999999854 3479999999999999998 543 48999999988763
Q ss_pred ---C---CCCccEEEECCCCCChhHHHHHHH
Q 036185 960 ---P---KGVANRVCLGLIPTSENSWVTAVQ 984 (1057)
Q Consensus 960 ---~---~~~~D~Vil~~~P~~~~~~~~a~~ 984 (1057)
. ...+|.|++|+ +.+..-+..+-+
T Consensus 80 ~~L~~~g~~~vDgIL~DL-GvSS~Qld~~~R 109 (285)
T 1wg8_A 80 RHLAALGVERVDGILADL-GVSSFHLDDPSR 109 (285)
T ss_dssp HHHHHTTCSCEEEEEEEC-SCCHHHHHCGGG
T ss_pred HHHHHcCCCCcCEEEeCC-cccccccccccc
Confidence 2 24699999998 766555544433
No 314
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.31 E-value=0.00037 Score=76.98 Aligned_cols=47 Identities=23% Similarity=0.304 Sum_probs=42.0
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHc
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQAN 942 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N 942 (1057)
.+|++|||+|||+|.+++.++ ..| .+++++|++|.+++.+++|++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~-~~g-~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAA-RWG-RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHH-HTT-CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHH-HcC-CeEEEEeCCHHHHHHHHHHHHHh
Confidence 679999999999999999987 445 47999999999999999999764
No 315
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.31 E-value=0.00045 Score=80.83 Aligned_cols=125 Identities=22% Similarity=0.253 Sum_probs=82.9
Q ss_pred CEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC----------------
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP---------------- 960 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~---------------- 960 (1057)
-+|+|||||+|++++-+- .+|...|+|+|+++.|++..+.|.... . ...++++|+.++..
T Consensus 89 ~~viDLFaG~GGlslG~~-~aG~~~v~avE~d~~A~~ty~~N~~~~--p-~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFE-SIGGQCVFTSEWNKHAVRTYKANHYCD--P-ATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp EEEEEESCTTSHHHHHHH-TTTEEEEEEECCCHHHHHHHHHHSCCC--T-TTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHH-HCCCEEEEEEeCCHHHHHHHHHhcccC--C-CcceeccchhhhhhccccccchhhHHhhhh
Confidence 479999999999999885 678888999999999999999885211 1 24567899887642
Q ss_pred --CCCccEEEECCCC---CC-h--------------------hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHH
Q 036185 961 --KGVANRVCLGLIP---TS-E--------------------NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKS 1014 (1057)
Q Consensus 961 --~~~~D~Vil~~~P---~~-~--------------------~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~ 1014 (1057)
...+|+|+.+| | .| + ..+...+++++.-.-.+.+-+|++..-... .....+.
T Consensus 165 ~~~~~~Dvl~gGp-PCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s~~-~g~~f~~ 242 (482)
T 3me5_A 165 QHIPEHDVLLAGF-PCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHD-KGKTFRI 242 (482)
T ss_dssp HHSCCCSEEEEEC-CCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTTGG-GGHHHHH
T ss_pred hcCCCCCEEEecC-CCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhccc-CCcHHHH
Confidence 13579999998 6 11 1 124455555532223577888887541100 0123456
Q ss_pred HHHHHHhcCCcee
Q 036185 1015 IYEIARSEGHRWE 1027 (1057)
Q Consensus 1015 i~~~~~~~g~~~~ 1027 (1057)
|.+..++.|+.+.
T Consensus 243 i~~~L~~lGY~v~ 255 (482)
T 3me5_A 243 IMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHTTEEET
T ss_pred HHHHHhcCCcEEE
Confidence 6667778898653
No 316
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.30 E-value=0.00056 Score=65.88 Aligned_cols=91 Identities=11% Similarity=0.021 Sum_probs=67.0
Q ss_pred ccCCCCEEEEecCcccH-hHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC--CCccEE-
Q 036185 892 LDCKDEVIVDLFAGIGY-FVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK--GVANRV- 967 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~-fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~--~~~D~V- 967 (1057)
...++.+|||++||.|+ .|+.++...|. .|+|+|+||.|++ +++.|+++.... ..||+|
T Consensus 32 ~~~~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~----------------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 32 CSGPGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG----------------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp HSCSSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT----------------EECCCSSSCCHHHHTTEEEEE
T ss_pred cCCCCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc----------------eEEccCCCCcccccCCcCEEE
Confidence 34567899999999995 99988743565 4999999999998 889999885432 479999
Q ss_pred EECCCCCChhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 968 CLGLIPTSENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 968 il~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
-++|+|.-...+.+.. ++-|.-|++.....+.
T Consensus 95 sirPP~El~~~i~~lA---~~v~adliI~pL~~E~ 126 (153)
T 2k4m_A 95 SIRPPAEIHSSLMRVA---DAVGARLIIKPLTGED 126 (153)
T ss_dssp EESCCTTTHHHHHHHH---HHHTCEEEEECBTTBC
T ss_pred EcCCCHHHHHHHHHHH---HHcCCCEEEEcCCCCc
Confidence 8899554444443333 2336778888887764
No 317
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.25 E-value=0.0005 Score=75.55 Aligned_cols=72 Identities=22% Similarity=0.144 Sum_probs=58.3
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcE--EEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCC-----CCCccE
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARL--VYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAP-----KGVANR 966 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~--V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~-----~~~~D~ 966 (1057)
...-+|+|||||+|++++.+. .+|... |+++|+++.|++..+.|. . ...++.+|+.++.. ...+|+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~-~aG~~~~~v~a~E~d~~a~~ty~~N~-----~-~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLK-DLGIQVDRYIASEVCEDSITVGMVRH-----Q-GKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHH-HTTBCEEEEEEECCCHHHHHHHHHHT-----T-TCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCCEEEEeCcCccHHHHHHH-HCCCccceEEEEECCHHHHHHHHHhC-----C-CCceeCCChHHccHHHhcccCCcCE
Confidence 445689999999999999875 678776 799999999999998884 2 24678999988753 135899
Q ss_pred EEECCCC
Q 036185 967 VCLGLIP 973 (1057)
Q Consensus 967 Vil~~~P 973 (1057)
++.+| |
T Consensus 87 l~ggp-P 92 (295)
T 2qrv_A 87 VIGGS-P 92 (295)
T ss_dssp EEECC-C
T ss_pred EEecC-C
Confidence 99998 6
No 318
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.23 E-value=0.00012 Score=74.00 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=77.1
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC----CCCCccEEE
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA----PKGVANRVC 968 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~----~~~~~D~Vi 968 (1057)
+.+|++|||+.||. | ++|+++.+++.+++++.. ++.++++|+.+.. +...||.|+
T Consensus 10 ~~~g~~vL~~~~g~---------------v-~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS---------------S-PVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp CCTTSEEEEEECTT---------------S-CHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGGCCCSSCEEEEE
T ss_pred CCCCCEEEEecCCc---------------e-eeeCCHHHHHHHHHhccc-----CcEEEEechhcCccccCCCCCEeEEE
Confidence 67899999999985 2 389999999999987532 3788999988764 345799999
Q ss_pred ECCC-----CCChhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCcee
Q 036185 969 LGLI-----PTSENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 969 l~~~-----P~~~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 1027 (1057)
+... +.....+.++.++|+ +||++.+.................+.+.+.+++.|+ ++
T Consensus 69 ~~~~l~~~~~~~~~~l~~~~r~Lk-pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 69 SGLVPGSTTLHSAEILAEIARILR-PGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp ECCSTTCCCCCCHHHHHHHHHHEE-EEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred ECChhhhcccCHHHHHHHHHHHCC-CCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 8532 445677888999998 699888853322110000000113456677788898 54
No 319
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.23 E-value=0.0022 Score=69.27 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=70.7
Q ss_pred CCEEEEecCcc--cHhHHHHHHh-CCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---C----CCCcc
Q 036185 896 DEVIVDLFAGI--GYFVLPFLVR-AKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---P----KGVAN 965 (1057)
Q Consensus 896 g~~VlDlf~G~--G~fsl~~a~~-~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~----~~~~D 965 (1057)
-..|||++||+ +.....+|.+ ....+|++||.+|.+++.+++.+..+.. +++.++++|+.+.. . ...+|
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~-~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPE-GRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSS-SEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCC-CcEEEEEecccChhhhhcccccccccC
Confidence 36899999998 4445554422 3345799999999999999998865432 47999999998751 1 12233
Q ss_pred -----EEEECCCCCC-------hhHHHHHHHHhhCCCcEEEEEcccccc
Q 036185 966 -----RVCLGLIPTS-------ENSWVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 966 -----~Vil~~~P~~-------~~~~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
.|+++..-+. ...+....+.|+ +||+|.+.....+.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~-PGG~Lvls~~~~d~ 205 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP-SGSYLAMSIGTAEF 205 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC-TTCEEEEEEECCTT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC-CCcEEEEEeccCCC
Confidence 4555532222 134555555666 79999998887653
No 320
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.20 E-value=0.038 Score=59.10 Aligned_cols=190 Identities=11% Similarity=-0.049 Sum_probs=117.2
Q ss_pred cccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEE
Q 036185 345 LGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHV 424 (1057)
Q Consensus 345 ~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~ 424 (1057)
+.+.+...++.+|+..|..+ .+.+.++|+.+++-..-. +++..-++.+.+..++++|+....+ +.+++
T Consensus 44 ftqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v 111 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKDKIVGLTWKN-----GLGFV 111 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESSS-----SEEEE
T ss_pred ccceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEE---ecCCccceeEEEEeCCEEEEEEeeC-----CEEEE
Confidence 44566666889999999754 257899999998754443 3444445666788899999985543 46999
Q ss_pred EECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEE-eeccCCCCCC-ceeeEEEE
Q 036185 425 LDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK-EDIAARSPHA-RFSHTMFL 502 (1057)
Q Consensus 425 yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~-v~~~~~~P~~-R~~hs~~~ 502 (1057)
||+.+.+-..--+ .+-.+.+++..++.+|+.-| .+.++.+|+.+.+-.. +... ..+.+ +.-.-+..
T Consensus 112 ~D~~t~~~~~ti~-----~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~-~~g~~~~~lNELe~ 179 (262)
T 3nol_A 112 WNIRNLRQVRSFN-----YDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVT-AHGEELPELNELEW 179 (262)
T ss_dssp EETTTCCEEEEEE-----CSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECE-ETTEECCCEEEEEE
T ss_pred EECccCcEEEEEE-----CCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEec-cCCccccccceeEE
Confidence 9999887543221 22355666666777888644 3579999999876443 3221 11111 11112444
Q ss_pred ECCEEEEEeccCCCCCCCeEEEEECCCCeEEEe-eccCCCCC-------cccceEEEEe--CCEEEEEeCC
Q 036185 503 YKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHL-KLNYVCKE-------LFVRSTANVV--DDDLIMIGGG 563 (1057)
Q Consensus 503 ~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v-~~~~~~~~-------~~~~~~a~~~--~~~iyi~GGg 563 (1057)
.+++||+-- ...++|.+.|+++.+=... ......+. .-.-.+.+.. .+++||.|-.
T Consensus 180 ~~G~lyan~-----w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 180 VDGEIFANV-----WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp ETTEEEEEE-----TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ECCEEEEEE-----ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 588888532 1356999999999865433 22111110 0112445554 4789998854
No 321
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.19 E-value=0.039 Score=61.14 Aligned_cols=229 Identities=12% Similarity=0.029 Sum_probs=128.0
Q ss_pred ccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcE-EEeccCCCCCCccccEEEE-ECCEEEEEcccCC
Q 036185 287 LWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTI-KAIHTEGSPSPRLGHTSSL-IGDHMFIIGGRAD 364 (1057)
Q Consensus 287 R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W-~~l~~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~ 364 (1057)
...+..+..++ ++|+.... .+.+.++|+.+.+. ..++ .... -+.++. .++++|+....
T Consensus 44 ~~~~~i~~~~~-----~lyv~~~~--------~~~v~viD~~t~~~~~~i~--~~~~---p~~i~~~~~g~lyv~~~~-- 103 (328)
T 3dsm_A 44 DVAQSMVIRDG-----IGWIVVNN--------SHVIFAIDINTFKEVGRIT--GFTS---PRYIHFLSDEKAYVTQIW-- 103 (328)
T ss_dssp SCEEEEEEETT-----EEEEEEGG--------GTEEEEEETTTCCEEEEEE--CCSS---EEEEEEEETTEEEEEEBS--
T ss_pred ccceEEEEECC-----EEEEEEcC--------CCEEEEEECcccEEEEEcC--CCCC---CcEEEEeCCCeEEEEECC--
Confidence 33455655444 48888752 35799999998876 3443 2222 233444 57899998643
Q ss_pred CCCCCCcEEEEECCCCcEEEeeccCCCC-CcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCC
Q 036185 365 PLNILSDVWVFNMAKSKWTLLECSGSVF-QPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPC 443 (1057)
Q Consensus 365 ~~~~~~~v~~yd~~t~~W~~~~~~g~~p-~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~ 443 (1057)
.+.++++|+.+++-...-..+... ....-+..++.++++|+..- ...+.+.++|+.+++....-..+..|
T Consensus 104 ----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~~~~~i~~g~~p- 174 (328)
T 3dsm_A 104 ----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDKVVDELTIGIQP- 174 (328)
T ss_dssp ----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTEEEEEEECSSCB-
T ss_pred ----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCeEEEEEEcCCCc-
Confidence 257999999998754322122210 00022234447889999742 01346999999998865443322222
Q ss_pred CcceeEEE-EECCEEEEEecCCCCcc-----cCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCC
Q 036185 444 ARHSHSML-AYGSRLYMFGGYNGEKA-----LGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPV 515 (1057)
Q Consensus 444 ~r~~~s~~-~~~~~lyv~GG~~~~~~-----~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~ 515 (1057)
+.++ .-++++|+....+.... .+.++++|+.+.+...... .|....-..++.. ++.+|+..+
T Consensus 175 ----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~---~~~g~~p~~la~~~d~~~lyv~~~--- 244 (328)
T 3dsm_A 175 ----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK---FKLGDWPSEVQLNGTRDTLYWINN--- 244 (328)
T ss_dssp ----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE---CCTTCCCEEEEECTTSCEEEEESS---
T ss_pred ----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe---cCCCCCceeEEEecCCCEEEEEcc---
Confidence 2222 23578887753221111 3679999999988664311 2212222344444 567887643
Q ss_pred CCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE--eCCEEEEEe
Q 036185 516 RQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV--VDDDLIMIG 561 (1057)
Q Consensus 516 ~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~--~~~~iyi~G 561 (1057)
.++++|+++.+.......... ...-.+.++ .++.+|+..
T Consensus 245 -----~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 245 -----DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp -----SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEE
T ss_pred -----EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEc
Confidence 799999988775321111110 011123334 267899987
No 322
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.16 E-value=0.0012 Score=71.85 Aligned_cols=124 Identities=13% Similarity=0.050 Sum_probs=89.7
Q ss_pred CCCEEEEecCcccHhHHHHHHhC-----CCcEEEEEecCH--------------------------HHHHHHHHHHHHcC
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRA-----KARLVYACEWNP--------------------------CAVEALKHNLQANS 943 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~-----~a~~V~avD~n~--------------------------~ai~~~~~N~~~N~ 943 (1057)
....||++++..|+-++.+|... ...+|+++|... ..++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 34589999999999999876322 145699999641 14788999999999
Q ss_pred CC-ccEEEEeCCccccCC---CCCccEEEECCCCCCh---hHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHH
Q 036185 944 VS-DHCIVLEGDNRFTAP---KGVANRVCLGLIPTSE---NSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIY 1016 (1057)
Q Consensus 944 ~~-~~v~~~~~D~~~~~~---~~~~D~Vil~~~P~~~---~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~ 1016 (1057)
+. ++|+++.||+.+.++ ...+|.|.+|- -... ..+......|+ +||+|.+..... . ....+.+.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDa-D~y~~~~~~Le~~~p~L~-pGGiIv~DD~~~-~------~G~~~Av~ 256 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG-DLYESTWDTLTNLYPKVS-VGGYVIVDDYMM-C------PPCKDAVD 256 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECC-CSHHHHHHHHHHHGGGEE-EEEEEEESSCTT-C------HHHHHHHH
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC-CccccHHHHHHHHHhhcC-CCEEEEEcCCCC-C------HHHHHHHH
Confidence 94 799999999999886 35799999997 3311 23555555566 699888877632 1 11256777
Q ss_pred HHHHhcCCcee
Q 036185 1017 EIARSEGHRWE 1027 (1057)
Q Consensus 1017 ~~~~~~g~~~~ 1027 (1057)
+.++..|..++
T Consensus 257 Ef~~~~~i~~~ 267 (282)
T 2wk1_A 257 EYRAKFDIADE 267 (282)
T ss_dssp HHHHHTTCCSC
T ss_pred HHHHhcCCceE
Confidence 88888886544
No 323
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.15 E-value=0.0015 Score=73.42 Aligned_cols=105 Identities=16% Similarity=0.158 Sum_probs=78.5
Q ss_pred CCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH-cC--C----CccEEEEeCCccccCC-----C
Q 036185 894 CKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA-NS--V----SDHCIVLEGDNRFTAP-----K 961 (1057)
Q Consensus 894 ~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~-N~--~----~~~v~~~~~D~~~~~~-----~ 961 (1057)
.+.++||=++.|-|..+-.+++ ...++|+.||++|..++.+++-... ++ + .++++++.+|+++++. .
T Consensus 204 ~~pkrVLIIGgGdG~~~revlk-h~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVK-LKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHT-TCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHh-cCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 3568999999999999999884 4567899999999999999986421 11 1 1368999999999884 3
Q ss_pred CCccEEEECCCC---CC-----------hhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 962 GVANRVCLGLIP---TS-----------ENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 962 ~~~D~Vil~~~P---~~-----------~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.+||+||+|+.. .. ..++..+.++|+ +||++.....+.
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~-p~GVlv~Q~~s~ 334 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLK-QDGKYFTQGNCV 334 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEE-EEEEEEEEEEET
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcC-CCCEEEEecCCC
Confidence 579999999621 11 234555666777 799998876554
No 324
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.03 E-value=0.094 Score=55.54 Aligned_cols=187 Identities=17% Similarity=0.129 Sum_probs=118.2
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.||+-.|..+ .+.+..+|+.+++-..-. .+|..-++.+++..++++|+..... +.+++||+.+.+-
T Consensus 32 ~LyestG~~g------~S~v~~vD~~tgkv~~~~--~l~~~~fgeGi~~~~~~ly~ltw~~------~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 32 HLYESTGETG------RSSVRKVDLETGRILQRA--EVPPPYFGAGIVAWRDRLIQLTWRN------HEGFVYDLATLTP 97 (243)
T ss_dssp EEEEEECCTT------SCEEEEEETTTCCEEEEE--ECCTTCCEEEEEEETTEEEEEESSS------SEEEEEETTTTEE
T ss_pred EEEEECCCCC------CceEEEEECCCCCEEEEE--eCCCCcceeEEEEeCCEEEEEEeeC------CEEEEEECCcCcE
Confidence 5999988654 367899999998865433 4566667788888999999985443 5899999988764
Q ss_pred EEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEE-eecCCCCCCCc-ceeEEEEECCEEEEE
Q 036185 383 TLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKE-LLINGEGPCAR-HSHSMLAYGSRLYMF 460 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~-~~~~g~~P~~r-~~~s~~~~~~~lyv~ 460 (1057)
..-- +.+..+.+.+..++++|+.-| .+.++.+|+.+.+-.. +.. +.-+.+. .---+...+++||+-
T Consensus 98 ~~ti-----~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~~~~I~V-~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 98 RARF-----RYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQVGSIKV-TAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp EEEE-----ECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEEETTEEEEE
T ss_pred EEEE-----eCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeEEEEEEE-ccCCcccccceeeEEeCCEEEEE
Confidence 3322 122345666666777898754 3469999999987533 332 1112222 122355678998855
Q ss_pred ecCCCCcccCcEEEEECCCCeEEEe-eccCC--------CCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEE
Q 036185 461 GGYNGEKALGDLYTFDVHACLWKKE-DIAAR--------SPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLL 525 (1057)
Q Consensus 461 GG~~~~~~~~~l~~yd~~t~~W~~v-~~~~~--------~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~y 525 (1057)
-. ..+++.+.|+.+.+-... ...+- .|..-.-.+.+.. ++.+||.|= ....+|..
T Consensus 166 vw-----~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK-----~wp~~~~v 231 (243)
T 3mbr_X 166 VW-----LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK-----RWPMLYEI 231 (243)
T ss_dssp ET-----TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET-----TCSEEEEE
T ss_pred EC-----CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC-----CCCcEEEE
Confidence 32 246899999999875432 21211 1111223455555 578998885 34455544
No 325
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.00 E-value=0.0027 Score=67.87 Aligned_cols=104 Identities=12% Similarity=0.008 Sum_probs=67.3
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH-cCCCccEEEEeCCccc-cCCCCCccEEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA-NSVSDHCIVLEGDNRF-TAPKGVANRVCL 969 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~-N~~~~~v~~~~~D~~~-~~~~~~~D~Vil 969 (1057)
.+.++.+||||+||.|.|+..++...++..|+|+|+.-+.. ..... .....++..+.+++.. .+....+|+|+.
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~----~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVls 146 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGH----EKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLC 146 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTC----CCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCc----ccccccCcCCCCeEEEeccceehhcCCCCccEEEe
Confidence 45678899999999999999887555777898988873320 00000 0011135556665321 223567999999
Q ss_pred CCCCCChh----------HHHHHHHHhhCCC-cEEEEEcccc
Q 036185 970 GLIPTSEN----------SWVTAVQALRSEG-GTLHVHGNVK 1000 (1057)
Q Consensus 970 ~~~P~~~~----------~~~~a~~~l~~~g-g~l~~~~~~~ 1000 (1057)
|..|++-. .+..|.+.|+ +| |.+.+--|.+
T Consensus 147 D~apnsG~~~~D~~rs~~LL~~a~~~Lk-pG~G~FV~KVf~p 187 (277)
T 3evf_A 147 DIGESSSSSVTEGERTVRVLDTVEKWLA-CGVDNFCVKVLAP 187 (277)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESCT
T ss_pred cCccCcCchHHHHHHHHHHHHHHHHHhC-CCCCeEEEEecCC
Confidence 99887311 1355566777 68 9888887774
No 326
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.99 E-value=0.0018 Score=66.95 Aligned_cols=81 Identities=14% Similarity=0.073 Sum_probs=60.6
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC-CccccCCCCCccEEEEC
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG-DNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~-D~~~~~~~~~~D~Vil~ 970 (1057)
.+.++.+|+||+|+.|.|+..++...++++|+|+|+.+.--+.=+ ..+.-|.. .|+|+.+ |++...+ ..+|.|++|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn-~v~fk~gvDv~~~~~-~~~DtllcD 151 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWN-IVKLMSGKDVFYLPP-EKCDTLLCD 151 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTT-SEEEECSCCGGGCCC-CCCSEEEEC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcC-ceEEEeccceeecCC-ccccEEEEe
Confidence 357888999999999999998887788999999999875431000 00112333 5899999 9876655 569999999
Q ss_pred CCCCC
Q 036185 971 LIPTS 975 (1057)
Q Consensus 971 ~~P~~ 975 (1057)
.-|++
T Consensus 152 IgeSs 156 (267)
T 3p8z_A 152 IGESS 156 (267)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 87865
No 327
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.95 E-value=0.003 Score=72.30 Aligned_cols=130 Identities=14% Similarity=0.041 Sum_probs=82.7
Q ss_pred EEEEecCcccHhHHHHHHhCC--CcE----EEEEecCHHHHHHHHHHHHHcCC-C-cc----------------------
Q 036185 898 VIVDLFAGIGYFVLPFLVRAK--ARL----VYACEWNPCAVEALKHNLQANSV-S-DH---------------------- 947 (1057)
Q Consensus 898 ~VlDlf~G~G~fsl~~a~~~~--a~~----V~avD~n~~ai~~~~~N~~~N~~-~-~~---------------------- 947 (1057)
+|+|||||+|++++.+- .+| ..- |.|+|+++.|++..+.|...... . ..
T Consensus 12 rvldLFsGiGG~~~Gl~-~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALK-NIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEETCTTCHHHHHHH-HHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred eEEEEecCcCHHHHHHH-HhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 79999999999998875 455 344 99999999999999999753210 0 00
Q ss_pred ------EE----------EEeCCccccCCC---CCccEEEECCCCC---C---------------hhHHHHHHHHhhC--
Q 036185 948 ------CI----------VLEGDNRFTAPK---GVANRVCLGLIPT---S---------------ENSWVTAVQALRS-- 988 (1057)
Q Consensus 948 ------v~----------~~~~D~~~~~~~---~~~D~Vil~~~P~---~---------------~~~~~~a~~~l~~-- 988 (1057)
+. ...+|+.++... ..+|+++.+| |= + ...+...++++..
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggp-PCQ~fS~ag~~~g~~d~~~~r~~L~~~~~rii~~~~ 169 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSF-PCQDLSVQGLQKGIDKELNTRSGLLWEIERILEEIK 169 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECC-CCTTTCTTSCCCCCCGGGCCSGGGHHHHHHHHHHHH
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeC-CCCCHHHhCCCCCCCccccccchhHHHHHHHHHHhh
Confidence 00 034788776542 2469999998 61 1 1224455555531
Q ss_pred ------CCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCceeeee
Q 036185 989 ------EGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWEVTI 1030 (1057)
Q Consensus 989 ------~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 1030 (1057)
..-.+.+-++++..-... .....+.+.+..++.|+.+...+
T Consensus 170 ~k~~~~~~Pk~~l~ENV~gl~~~~-~~~~~~~i~~~l~~~GY~v~~~v 216 (403)
T 4dkj_A 170 NSFSKEEMPKYLLMENVKNLLSHK-NKKNYNTWLKQLEKFGYKSKTYL 216 (403)
T ss_dssp HHSCGGGSCSEEEEEEEGGGGSHH-HHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhhccccCCCEEEEecchhhhhhc-cchHHHHHHHHHHhCCCeEEEEE
Confidence 233577888887642111 12345667777788898765444
No 328
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.95 E-value=0.16 Score=56.11 Aligned_cols=190 Identities=11% Similarity=0.079 Sum_probs=114.7
Q ss_pred cccEEEEeCCCCcEEEecc---CCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEE-EeeccCCCCCc
Q 036185 319 RNDLFLLDPLQGTIKAIHT---EGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWT-LLECSGSVFQP 394 (1057)
Q Consensus 319 ~~d~~~yd~~t~~W~~l~~---~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~-~~~~~g~~p~~ 394 (1057)
.+.+..||+.++++...-. ...+.....+.++..++++|+.... .+.+.++|+.+.+-. .++ ....|
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~---~~~~p 86 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRIT---GFTSP 86 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEE---CCSSE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcC---CCCCC
Confidence 4679999999988764210 0223344456677789999998653 257999999988763 343 12222
Q ss_pred ccceEEEE-ECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCC-CCcceeEEEEECCEEEEEecCCCCcccCcE
Q 036185 395 RHRHAAAV-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGP-CARHSHSMLAYGSRLYMFGGYNGEKALGDL 472 (1057)
Q Consensus 395 R~~hsa~~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P-~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l 472 (1057)
+..++ -++++|+.... .+.+.++|+.+.+-...-..+... ....-+.++..++++|+.... ..+.+
T Consensus 87 ---~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v 154 (328)
T 3dsm_A 87 ---RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRI 154 (328)
T ss_dssp ---EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEE
T ss_pred ---cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEE
Confidence 23333 67899998643 356999999998765322222200 000222344478899998521 13569
Q ss_pred EEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCC-----CCCeEEEEECCCCeEEE
Q 036185 473 YTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQ-----NYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 473 ~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~-----~~~~i~~yd~~~~~W~~ 534 (1057)
.++|+.+.+.......+..| +.++.- ++++|+........ ..+.++++|+.+.+...
T Consensus 155 ~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 155 LKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp EEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred EEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 99999998866532223322 122222 57877765322111 13689999999987664
No 329
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.81 E-value=0.0011 Score=70.97 Aligned_cols=104 Identities=15% Similarity=0.014 Sum_probs=67.9
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEe-C-CccccCCCCCccEEEE
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLE-G-DNRFTAPKGVANRVCL 969 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~-~-D~~~~~~~~~~D~Vil 969 (1057)
.++++.+||||+||.|.|+..++...++..|+++|+.....+.+... .....++..+. . |+..+ +..++|+|+.
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv~~l-~~~~~DvVLS 162 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDVFNM-EVIPGDTLLC 162 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCGGGS-CCCCCSEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc---ccCCCceEEeeCCcchhhc-CCCCcCEEEe
Confidence 35778899999999999999887566788899999975421111100 00111333333 3 44443 4567999999
Q ss_pred CCCCCCh----------hHHHHHHHHhhCCC--cEEEEEcccc
Q 036185 970 GLIPTSE----------NSWVTAVQALRSEG--GTLHVHGNVK 1000 (1057)
Q Consensus 970 ~~~P~~~----------~~~~~a~~~l~~~g--g~l~~~~~~~ 1000 (1057)
|.-|.+- ..+.-|...|+ +| |.+.+--|.+
T Consensus 163 DmApnsG~~~~D~~rs~~LL~~A~~~Lk-~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 163 DIGESSPSIAVEEQRTLRVLNCAKQWLQ-EGNYTEFCIKVLCP 204 (282)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEEESCC
T ss_pred cCccCCCChHHHHHHHHHHHHHHHHHcC-CCCCCcEEEEEecC
Confidence 9988731 12444556777 57 9888888873
No 330
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.76 E-value=0.5 Score=52.76 Aligned_cols=198 Identities=17% Similarity=0.209 Sum_probs=111.1
Q ss_pred ccEEEEeCCCCc--EEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc--EEEeeccCCCCCc-
Q 036185 320 NDLFLLDPLQGT--IKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK--WTLLECSGSVFQP- 394 (1057)
Q Consensus 320 ~d~~~yd~~t~~--W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~- 394 (1057)
..++.||+.+++ |..-........+...+.+..++.+|+ |..+ ..++.||+.+.+ |+.-. ..|..
T Consensus 153 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~------g~l~~~d~~tG~~~w~~~~---~~~~~~ 222 (376)
T 3q7m_A 153 GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDN------GRVSAVLMEQGQMIWQQRI---SQATGS 222 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTT------TEEEEEETTTCCEEEEEEC---CC----
T ss_pred CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCC------CEEEEEECCCCcEEEEEec---ccCCCC
Confidence 368999998876 765431111111222344555777776 3322 368999998764 76543 11111
Q ss_pred ----c---cceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCEEEEEecCCC
Q 036185 395 ----R---HRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGEGPCARHSHSMLAYGSRLYMFGGYNG 465 (1057)
Q Consensus 395 ----R---~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~ 465 (1057)
+ .....++.++.+|+.+. + ..++.||+.+.+ |+.... ...+.+..++.+|+...
T Consensus 223 ~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~~d~~tG~~~w~~~~~--------~~~~~~~~~~~l~~~~~--- 285 (376)
T 3q7m_A 223 TEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTALDLRSGQIMWKRELG--------SVNDFIVDGNRIYLVDQ--- 285 (376)
T ss_dssp -------CCCCCCEEETTEEEEECT-T-----SCEEEEETTTCCEEEEECCC--------CEEEEEEETTEEEEEET---
T ss_pred cccccccccCCCcEEECCEEEEEec-C-----cEEEEEECCCCcEEeeccCC--------CCCCceEECCEEEEEcC---
Confidence 1 22334456788887642 2 248999998774 665311 12345667888988753
Q ss_pred CcccCcEEEEECCCCe--EEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCe--EEEeeccCCC
Q 036185 466 EKALGDLYTFDVHACL--WKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHI--WKHLKLNYVC 541 (1057)
Q Consensus 466 ~~~~~~l~~yd~~t~~--W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~--W~~v~~~~~~ 541 (1057)
-..++.||+.+.+ |+.-. . ..+...+.+..++.||+... ...+++||+.+.+ |+.-.. ..
T Consensus 286 ---~g~l~~~d~~tG~~~w~~~~----~-~~~~~~~~~~~~~~l~v~~~------~g~l~~~d~~tG~~~~~~~~~-~~- 349 (376)
T 3q7m_A 286 ---NDRVMALTIDGGVTLWTQSD----L-LHRLLTSPVLYNGNLVVGDS------EGYLHWINVEDGRFVAQQKVD-SS- 349 (376)
T ss_dssp ---TCCEEEEETTTCCEEEEECT----T-TTSCCCCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECC-TT-
T ss_pred ---CCeEEEEECCCCcEEEeecc----c-CCCcccCCEEECCEEEEEeC------CCeEEEEECCCCcEEEEEecC-CC-
Confidence 2359999998765 76531 1 11222334456888877532 2379999998876 543210 11
Q ss_pred CCcccceEEEEeCCEEEEEeCC
Q 036185 542 KELFVRSTANVVDDDLIMIGGG 563 (1057)
Q Consensus 542 ~~~~~~~~a~~~~~~iyi~GGg 563 (1057)
......+..++.+|+....
T Consensus 350 ---~~~~~~~~~~~~l~v~~~~ 368 (376)
T 3q7m_A 350 ---GFQTEPVAADGKLLIQAKD 368 (376)
T ss_dssp ---CBCSCCEEETTEEEEEBTT
T ss_pred ---cceeCCEEECCEEEEEeCC
Confidence 1122334568888876543
No 331
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=96.74 E-value=0.0042 Score=78.46 Aligned_cols=125 Identities=21% Similarity=0.173 Sum_probs=79.7
Q ss_pred CEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc----------------C
Q 036185 897 EVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT----------------A 959 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~----------------~ 959 (1057)
-+++|||||+|++++-+- .+|. ..|.|+|+++.|++..+.|. . ...++.+|+.++ +
T Consensus 541 l~~iDLFaG~GGlslGl~-~AG~~~vv~avEid~~A~~ty~~N~-----p-~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFH-QAGISDTLWAIEMWDPAAQAFRLNN-----P-GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp EEEEEESCTTSHHHHHHH-HHTSEEEEEEECSSHHHHHHHHHHC-----T-TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CeEEEeccCccHHHHHHH-HCCCCceEEEEECCHHHHHHHHHhC-----C-CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 379999999999998875 5786 67899999999999998873 2 245677775432 1
Q ss_pred C-CCCccEEEECCCC---CC-h-----h--------HHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHh
Q 036185 960 P-KGVANRVCLGLIP---TS-E-----N--------SWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARS 1021 (1057)
Q Consensus 960 ~-~~~~D~Vil~~~P---~~-~-----~--------~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 1021 (1057)
+ ...+|+|+.+| | .+ + . .+...++++..-...+.+-+|+...-... .....+.+.+....
T Consensus 614 p~~~~vDll~GGp-PCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~~-~~~~~~~i~~~L~~ 691 (1002)
T 3swr_A 614 PQKGDVEMLCGGP-PCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFK-RSMVLKLTLRCLVR 691 (1002)
T ss_dssp CCTTTCSEEEECC-CCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTTG-GGHHHHHHHHHHHH
T ss_pred ccCCCeeEEEEcC-CCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhccC-cchHHHHHHHHHHh
Confidence 1 23589999998 6 11 1 0 13333444431123577888887531100 01234556666677
Q ss_pred cCCceeeee
Q 036185 1022 EGHRWEVTI 1030 (1057)
Q Consensus 1022 ~g~~~~~~~ 1030 (1057)
.|+.+...+
T Consensus 692 lGY~v~~~v 700 (1002)
T 3swr_A 692 MGYQCTFGV 700 (1002)
T ss_dssp HTCEEEEEE
T ss_pred cCCeEEEEE
Confidence 898865544
No 332
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.69 E-value=0.19 Score=53.79 Aligned_cols=178 Identities=10% Similarity=0.010 Sum_probs=111.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.||+..|..+ .+.+..+|+.+++-..-- .++..-++.+++..+++||+....+ +.+++||+.+.+-
T Consensus 54 ~LyestG~~g------~S~v~~vD~~Tgkv~~~~--~l~~~~FgeGit~~g~~ly~ltw~~------~~v~v~D~~t~~~ 119 (262)
T 3nol_A 54 YFYESTGLNG------RSSIRKVDIESGKTLQQI--ELGKRYFGEGISDWKDKIVGLTWKN------GLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEEETT------EEEEEEECTTTCCEEEEE--ECCTTCCEEEEEEETTEEEEEESSS------SEEEEEETTTCCE
T ss_pred EEEEECCCCC------CceEEEEECCCCcEEEEE--ecCCccceeEEEEeCCEEEEEEeeC------CEEEEEECccCcE
Confidence 6999998654 357899999998755433 3455556677888899999985533 5899999988765
Q ss_pred E-EeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEE-EeecCC-CCCCCcceeEEEEECCEEEE
Q 036185 383 T-LLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWK-ELLING-EGPCARHSHSMLAYGSRLYM 459 (1057)
Q Consensus 383 ~-~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~-~~~~~g-~~P~~r~~~s~~~~~~~lyv 459 (1057)
. .++ .+-.+.+.+..++.+|+.-| .+.++.+|+.+.+-. .+.... ..|...-+ -+...+++||+
T Consensus 120 ~~ti~------~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN-ELe~~~G~lya 186 (262)
T 3nol_A 120 VRSFN------YDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELN-ELEWVDGEIFA 186 (262)
T ss_dssp EEEEE------CSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEE-EEEEETTEEEE
T ss_pred EEEEE------CCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccc-eeEEECCEEEE
Confidence 3 333 12244555555677888654 246999999987643 333310 01111111 24456899886
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCC--------CCCceeeEEEEE--CCEEEEEec
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARS--------PHARFSHTMFLY--KNYLGLFGG 512 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~--------P~~R~~hs~~~~--~~~l~i~GG 512 (1057)
--- ..+.|.+.|+.+.+-...-..+.+ +..-.-.+.+.. .+.+||.|-
T Consensus 187 n~w-----~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 187 NVW-----QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EET-----TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEc-----cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 432 246899999999875443221211 111223455555 578888885
No 333
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.67 E-value=0.0074 Score=64.61 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=55.1
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC-CccccCCCCCccEEEEC
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG-DNRFTAPKGVANRVCLG 970 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~-D~~~~~~~~~~D~Vil~ 970 (1057)
.+.++.+||||+|+.|.|+..++...++++|+|+|+...--+.=+ ..+.-+.. -|.++.+ |++.+.+ ..+|.|++|
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~-lV~~~~~~Dv~~l~~-~~~D~ivcD 167 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWN-IVTMKSGVDVFYRPS-ECCDTLLCD 167 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGG-GEEEECSCCTTSSCC-CCCSEEEEC
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCc-ceEEEeccCHhhCCC-CCCCEEEEE
Confidence 356788999999999999998887788999999999875221000 00011112 3888988 8877655 569999999
Q ss_pred C
Q 036185 971 L 971 (1057)
Q Consensus 971 ~ 971 (1057)
.
T Consensus 168 i 168 (321)
T 3lkz_A 168 I 168 (321)
T ss_dssp C
T ss_pred C
Confidence 7
No 334
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.63 E-value=0.43 Score=53.33 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=115.4
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCCC-----CCccccEEEEECCEEEEEcccCCCCCCCCcEEEE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGSP-----SPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVF 375 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~P-----~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~y 375 (1057)
.||+... ...+++||+.+++ |+.-.....+ ......+.+..++.+|+.... ..++.|
T Consensus 55 ~v~~~~~---------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~-------g~l~a~ 118 (376)
T 3q7m_A 55 VVYAADR---------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK-------AQVYAL 118 (376)
T ss_dssp EEEEECT---------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------SEEEEE
T ss_pred EEEEEcC---------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------CEEEEE
Confidence 4887654 1368999998765 6643211110 122334455668888885431 479999
Q ss_pred ECCCCc--EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCCCCCCcceeEEE
Q 036185 376 NMAKSK--WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGEGPCARHSHSML 451 (1057)
Q Consensus 376 d~~t~~--W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~~P~~r~~~s~~ 451 (1057)
|..+++ |+.-.. + ....+.++.++.+|+..+ ...++.||+.+++ |+.-..... ...+...+.+
T Consensus 119 d~~tG~~~W~~~~~-~-----~~~~~p~~~~~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~~~-~~~~~~~~~~ 185 (376)
T 3q7m_A 119 NTSDGTVAWQTKVA-G-----EALSRPVVSDGLVLIHTS------NGQLQALNEADGAVKWTVNLDMPS-LSLRGESAPT 185 (376)
T ss_dssp ETTTCCEEEEEECS-S-----CCCSCCEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC------CCCCCCE
T ss_pred ECCCCCEEEEEeCC-C-----ceEcCCEEECCEEEEEcC------CCeEEEEECCCCcEEEEEeCCCCc-eeecCCCCcE
Confidence 998775 765421 1 112233456888887432 2369999998876 876543211 1112223344
Q ss_pred EECCEEEEEecCCCCcccCcEEEEECCCC--eEEEeeccCC--CCCCc---eeeEEEEECCEEEEEeccCCCCCCCeEEE
Q 036185 452 AYGSRLYMFGGYNGEKALGDLYTFDVHAC--LWKKEDIAAR--SPHAR---FSHTMFLYKNYLGLFGGCPVRQNYQELSL 524 (1057)
Q Consensus 452 ~~~~~lyv~GG~~~~~~~~~l~~yd~~t~--~W~~v~~~~~--~P~~R---~~hs~~~~~~~l~i~GG~~~~~~~~~i~~ 524 (1057)
..++.+|+ |..+ ..++.||+.+. .|+....... ....+ .....+..++.+|+.+. ...++.
T Consensus 186 ~~~~~v~~-g~~~-----g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~ 253 (376)
T 3q7m_A 186 TAFGAAVV-GGDN-----GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTA 253 (376)
T ss_dssp EETTEEEE-CCTT-----TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEEE
T ss_pred EECCEEEE-EcCC-----CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEEE
Confidence 55777766 3222 35899999765 4776421100 00011 11233455788877542 237899
Q ss_pred EECCCC--eEEEeeccCCCCCcccceEEEEeCCEEEEEeC
Q 036185 525 LDLQLH--IWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562 (1057)
Q Consensus 525 yd~~~~--~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GG 562 (1057)
||+.+. .|+.-. . ...+.+..++.+|+...
T Consensus 254 ~d~~tG~~~w~~~~--~------~~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 254 LDLRSGQIMWKREL--G------SVNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp EETTTCCEEEEECC--C------CEEEEEEETTEEEEEET
T ss_pred EECCCCcEEeeccC--C------CCCCceEECCEEEEEcC
Confidence 999876 466421 1 12344556888888764
No 335
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=96.57 E-value=0.0075 Score=75.68 Aligned_cols=43 Identities=23% Similarity=0.373 Sum_probs=35.7
Q ss_pred CCEEEEecCcccHhHHHHHHhCC------CcEEEEEecCHHHHHHHHHHH
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAK------ARLVYACEWNPCAVEALKHNL 939 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~------a~~V~avD~n~~ai~~~~~N~ 939 (1057)
.-+|+|||||.|+|++-+- .+| ..-|.|+|+|+.|++..+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe-~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLC-LGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHH-HHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHH-HhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3479999999999998765 334 456899999999999999883
No 336
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.50 E-value=0.55 Score=50.40 Aligned_cols=201 Identities=10% Similarity=0.058 Sum_probs=119.3
Q ss_pred eEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCC
Q 036185 290 HSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNIL 369 (1057)
Q Consensus 290 hsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~ 369 (1057)
|.....++ +.+|+..|..+ .+.+..+|+.+++-..-- .++....+..++..++++|+..-. .
T Consensus 24 ~Gl~~~~d----g~Lyvstg~~~------~s~v~~iD~~tg~v~~~i--~l~~~~fgeGi~~~g~~lyv~t~~------~ 85 (266)
T 2iwa_A 24 QGLVYAEN----DTLFESTGLYG------RSSVRQVALQTGKVENIH--KMDDSYFGEGLTLLNEKLYQVVWL------K 85 (266)
T ss_dssp EEEEECST----TEEEEEECSTT------TCEEEEEETTTCCEEEEE--ECCTTCCEEEEEEETTEEEEEETT------C
T ss_pred ccEEEeCC----CeEEEECCCCC------CCEEEEEECCCCCEEEEE--ecCCCcceEEEEEeCCEEEEEEec------C
Confidence 55555332 47999877432 367999999998755432 334444556777889999998543 3
Q ss_pred CcEEEEECCCCcEE-EeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEE-EeecCCCCCCCc-c
Q 036185 370 SDVWVFNMAKSKWT-LLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWK-ELLINGEGPCAR-H 446 (1057)
Q Consensus 370 ~~v~~yd~~t~~W~-~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~-~~~~~g~~P~~r-~ 446 (1057)
+.+++||+.+.+=. .++ .+ +| .+...+..++++|+.-| .+.++.+|+.+.+-. .+.. +..+.+. .
T Consensus 86 ~~v~viD~~t~~v~~~i~-~g-~~---~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~ 153 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFT-HQ-MK---DGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIR 153 (266)
T ss_dssp SEEEEEETTTTEEEEEEE-CC-SS---SCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCC
T ss_pred CEEEEEECCCCcEEEEEE-CC-CC---CeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCccccc
Confidence 57999999887532 232 12 22 23334444667998654 357999999997643 3332 2112221 1
Q ss_pred eeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEE-eeccC--------CCCCCceeeEEEEE--CCEEEEEeccCC
Q 036185 447 SHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK-EDIAA--------RSPHARFSHTMFLY--KNYLGLFGGCPV 515 (1057)
Q Consensus 447 ~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~-v~~~~--------~~P~~R~~hs~~~~--~~~l~i~GG~~~ 515 (1057)
-..+...++++|+--. ..+++.+.|+.+.+-.. +...+ ..+..-.-.+.+.. ++.+||.|+
T Consensus 154 ~nele~~dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk--- 225 (266)
T 2iwa_A 154 LNELEYINGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK--- 225 (266)
T ss_dssp EEEEEEETTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET---
T ss_pred ceeEEEECCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC---
Confidence 1233445888886532 24689999999986433 21111 01111123455555 468999987
Q ss_pred CCCCCeEEEEECCCC
Q 036185 516 RQNYQELSLLDLQLH 530 (1057)
Q Consensus 516 ~~~~~~i~~yd~~~~ 530 (1057)
..+.++..++...
T Consensus 226 --~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 --LWPKLFEIKLHLV 238 (266)
T ss_dssp --TCSEEEEEEEEEC
T ss_pred --CCCeEEEEEEecc
Confidence 3457777776543
No 337
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.49 E-value=0.11 Score=58.20 Aligned_cols=186 Identities=13% Similarity=0.139 Sum_probs=104.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+|+.|+.+ +.+.++|+.+++....- ... ..-.+++.. +..+|+.|+.+ ..+.+||+.+
T Consensus 2 ~~l~vs~~~d--------~~v~v~d~~~~~~~~~~--~~~--~~~~~~~~s~dg~~l~~~~~~d------~~i~v~d~~~ 63 (391)
T 1l0q_A 2 TFAYIANSES--------DNISVIDVTSNKVTATI--PVG--SNPMGAVISPDGTKVYVANAHS------NDVSIIDTAT 63 (391)
T ss_dssp EEEEEEETTT--------TEEEEEETTTTEEEEEE--ECS--SSEEEEEECTTSSEEEEEEGGG------TEEEEEETTT
T ss_pred CEEEEEcCCC--------CEEEEEECCCCeEEEEe--ecC--CCcceEEECCCCCEEEEECCCC------CeEEEEECCC
Confidence 3578887754 36889999887654332 111 112333333 34677777654 3799999988
Q ss_pred CcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CC
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GS 455 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~ 455 (1057)
++....-..+ ..-.+.++. +..+|+.|..+ +.+.+||+.+++.......+ ..-.+++.. +.
T Consensus 64 ~~~~~~~~~~-----~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~ 128 (391)
T 1l0q_A 64 NNVIATVPAG-----SSPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKTG-----KSPLGLALSPDGK 128 (391)
T ss_dssp TEEEEEEECS-----SSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSS
T ss_pred CeEEEEEECC-----CCccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeCC-----CCcceEEECCCCC
Confidence 8765443111 122233333 33466655432 35999999988765543321 112333332 33
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
.+|+.++.+ +.++.||+.+.+.......+.. ..+++.. +..+|+.++. ...++++|+.+.+..
T Consensus 129 ~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~-----~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 129 KLYVTNNGD-----KTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFD-----SMSISVIDTVTNSVI 193 (391)
T ss_dssp EEEEEETTT-----TEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEE
T ss_pred EEEEEeCCC-----CEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCC-----CCEEEEEECCCCeEE
Confidence 577776543 3699999998876654222211 1233322 3467676653 247999999988665
Q ss_pred Ee
Q 036185 534 HL 535 (1057)
Q Consensus 534 ~v 535 (1057)
..
T Consensus 194 ~~ 195 (391)
T 1l0q_A 194 DT 195 (391)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 338
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.49 E-value=0.17 Score=57.56 Aligned_cols=189 Identities=14% Similarity=0.066 Sum_probs=101.6
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
..+|.+|+.+.++..+.....+ ..-.+++.. ++.+|+.++.+ ..+++||+.+.+.......+.........
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v 172 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTG--FQPKSVRFIDNTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFV 172 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECS--SCBCCCEESSSSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEE
T ss_pred eEEEEECCCCCcceEEEEEcCC--CCceEEEEeCCCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCce
Confidence 3788999887766655422122 212223322 67888877654 35999999988876543111111111122
Q ss_pred EEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCEEEEEecCCCCcccCcEEE
Q 036185 399 AAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GSRLYMFGGYNGEKALGDLYT 474 (1057)
Q Consensus 399 sa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~~lyv~GG~~~~~~~~~l~~ 474 (1057)
.++.+ ++++|+.|+.++ .+.+||+.+.+....-.. ....-.+++.. ++.+|+.++.++ .+..
T Consensus 173 ~~~~~~~~~~~~~s~~~d~-----~v~~~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~-----~i~~ 238 (433)
T 3bws_A 173 ETISIPEHNELWVSQMQAN-----AVHVFDLKTLAYKATVDL----TGKWSKILLYDPIRDLVYCSNWISE-----DISV 238 (433)
T ss_dssp EEEEEGGGTEEEEEEGGGT-----EEEEEETTTCCEEEEEEC----SSSSEEEEEEETTTTEEEEEETTTT-----EEEE
T ss_pred eEEEEcCCCEEEEEECCCC-----EEEEEECCCceEEEEEcC----CCCCeeEEEEcCCCCEEEEEecCCC-----cEEE
Confidence 22333 678888877543 589999988765433221 11122233333 345666665433 5999
Q ss_pred EECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCC---CCCeEEEEECCCCeEEEe
Q 036185 475 FDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQ---NYQELSLLDLQLHIWKHL 535 (1057)
Q Consensus 475 yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~---~~~~i~~yd~~~~~W~~v 535 (1057)
||+.+....... +....-.+++.. ++..+++++..... ....+++||+.+.+....
T Consensus 239 ~d~~~~~~~~~~-----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~ 298 (433)
T 3bws_A 239 IDRKTKLEIRKT-----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDT 298 (433)
T ss_dssp EETTTTEEEEEC-----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEE
T ss_pred EECCCCcEEEEe-----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEee
Confidence 999988765431 111122233332 44444555432221 134799999988765443
No 339
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.48 E-value=0.33 Score=52.13 Aligned_cols=191 Identities=13% Similarity=0.050 Sum_probs=112.3
Q ss_pred ccEEEEEC-CEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEE
Q 036185 346 GHTSSLIG-DHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHV 424 (1057)
Q Consensus 346 ~hs~v~~~-~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~ 424 (1057)
-+.++..+ +.+|+..|..+ .+.+.++|+.+++=...- +++...+....+..++++|+..-. .+.+++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i---~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~v 90 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIH---KMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFI 90 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEETT-----CSEEEE
T ss_pred cccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEE---ecCCCcceEEEEEeCCEEEEEEec-----CCEEEE
Confidence 35666665 79999877422 267999999998854432 233333455677778899998543 346999
Q ss_pred EECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEE-eeccCCCCCCc-eeeEEEE
Q 036185 425 LDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKK-EDIAARSPHAR-FSHTMFL 502 (1057)
Q Consensus 425 yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~-v~~~~~~P~~R-~~hs~~~ 502 (1057)
||+.+.+-..--+.+ .| .+.+++.-++++|+.-| .+.++.+|+.+.+-.. +.. +..+.+. .-..+..
T Consensus 91 iD~~t~~v~~~i~~g-~~---~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~V-g~~~~p~~~~nele~ 159 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ-MK---DGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNV-KYNGHRVIRLNELEY 159 (266)
T ss_dssp EETTTTEEEEEEECC-SS---SCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEE
T ss_pred EECCCCcEEEEEECC-CC---CeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEE-CCCCcccccceeEEE
Confidence 999987543221112 12 34445555667888643 4679999999876443 322 2112111 1223344
Q ss_pred ECCEEEEEeccCCCCCCCeEEEEECCCCeEE-EeeccCCC--------CCcccceEEEEe--CCEEEEEeCCC
Q 036185 503 YKNYLGLFGGCPVRQNYQELSLLDLQLHIWK-HLKLNYVC--------KELFVRSTANVV--DDDLIMIGGGA 564 (1057)
Q Consensus 503 ~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~-~v~~~~~~--------~~~~~~~~a~~~--~~~iyi~GGg~ 564 (1057)
.++++|+--. ..+++.+.|+++.+=. .+...... +..-.-.+.+.. ++++||.|+..
T Consensus 160 ~dg~lyvn~~-----~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 160 INGEVWANIW-----QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ETTEEEEEET-----TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ECCEEEEecC-----CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 4888886532 3569999999987543 22211110 000111344444 46899998763
No 340
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.45 E-value=0.16 Score=54.45 Aligned_cols=158 Identities=8% Similarity=-0.011 Sum_probs=102.0
Q ss_pred cccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEE
Q 036185 345 LGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHV 424 (1057)
Q Consensus 345 ~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~ 424 (1057)
+.+.+...++.+|+..|..+ .+.++|+.+++-..-. ++..-++...+..++++|+....+ +.+++
T Consensus 56 ftqGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V 120 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWTE-----GLLFT 120 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESSS-----CEEEE
T ss_pred ccceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEccC-----CEEEE
Confidence 34566777899999999765 2899999988643221 223334556777789999985543 46999
Q ss_pred EECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCc-eeeEEEEE
Q 036185 425 LDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHAR-FSHTMFLY 503 (1057)
Q Consensus 425 yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R-~~hs~~~~ 503 (1057)
||+.+.+-..--+ .+-.+.+++..++.||+.-| .+.++.+|+++.+-..--..+..+.+. .-..+...
T Consensus 121 ~D~~Tl~~~~ti~-----~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 121 WSGMPPQRERTTR-----YSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EETTTTEEEEEEE-----CSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EECCcCcEEEEEe-----CCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 9999876543222 22345677777889999854 457999999997654321111122221 11234455
Q ss_pred CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 504 KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 504 ~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
+++||+-- + ..++|.+.|+++.+=.
T Consensus 190 dG~lyanv-w----~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 190 NGVIYANI-W----HSSDVLEIDPATGTVV 214 (268)
T ss_dssp TTEEEEEE-T----TCSEEEEECTTTCBEE
T ss_pred CCEEEEEE-C----CCCeEEEEeCCCCcEE
Confidence 88888532 1 3569999999998643
No 341
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.11 Score=57.44 Aligned_cols=189 Identities=8% Similarity=0.008 Sum_probs=99.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--C--CEEEEEcccCCCCCCCCcEEEEECC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--G--DHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~--~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
..++.|+.++ .+.+||....++..+.. +......-.++.+ + +.+++.|+.++ .+.+||..
T Consensus 24 ~~l~~~~~dg--------~i~iw~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~~~dg------~v~iwd~~ 87 (379)
T 3jrp_A 24 KRLATCSSDK--------TIKIFEVEGETHKLIDT--LTGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKEE 87 (379)
T ss_dssp SEEEEEETTS--------CEEEEEEETTEEEEEEE--ECCCSSCEEEEEECCGGGCSEEEEEETTS------CEEEEEEE
T ss_pred CEEEEEECCC--------cEEEEecCCCcceeeeE--ecCCCCcEEEEEeCCCCCCCEEEEeccCC------EEEEEEcC
Confidence 4677777544 47777777666655432 1111122222333 2 56777777654 68999999
Q ss_pred CCcEEEeeccCCCCCcccceEEEEE--C--CEEEEEcccCCCcccceEEEEECCCCcE-EEeecCCCCCCCcceeEEEEE
Q 036185 379 KSKWTLLECSGSVFQPRHRHAAAVI--G--SKIYVFGGLNNDTIFSSLHVLDTDTLQW-KELLINGEGPCARHSHSMLAY 453 (1057)
Q Consensus 379 t~~W~~~~~~g~~p~~R~~hsa~~~--~--~~iyv~GG~~~~~~~~~v~~yD~~t~~W-~~~~~~g~~P~~r~~~s~~~~ 453 (1057)
++.|..+... ......-.++.+ + +.+++.|+.++ .+.+||+.+... ......+ .+ ..-.++...
T Consensus 88 ~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~-~~--~~v~~~~~~ 156 (379)
T 3jrp_A 88 NGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDA-HA--IGVNSASWA 156 (379)
T ss_dssp TTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTTSCCCEEEEEC-CT--TCEEEEEEC
T ss_pred CCceeEeeee---cCCCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCCCceeeEEecC-CC--CceEEEEEc
Confidence 9988776532 111222222333 2 56777777654 478888876632 1111100 01 111222222
Q ss_pred --------------CCEEEEEecCCCCcccCcEEEEECCCC--eEEEeeccCCCCCCceeeEEEEE-C---CEEEEEecc
Q 036185 454 --------------GSRLYMFGGYNGEKALGDLYTFDVHAC--LWKKEDIAARSPHARFSHTMFLY-K---NYLGLFGGC 513 (1057)
Q Consensus 454 --------------~~~lyv~GG~~~~~~~~~l~~yd~~t~--~W~~v~~~~~~P~~R~~hs~~~~-~---~~l~i~GG~ 513 (1057)
++.+++.|+.++ .+..||+.+. .|..+........ .-.+++.. + +.+++.|+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp CCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEET
T ss_pred CccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCCCeEEEEeC
Confidence 467888888765 4777877543 3554322111111 11222222 3 678888875
Q ss_pred CCCCCCCeEEEEECCCC
Q 036185 514 PVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 514 ~~~~~~~~i~~yd~~~~ 530 (1057)
++ .+.+||+.+.
T Consensus 230 dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 230 DR-----TCIIWTQDNE 241 (379)
T ss_dssp TS-----CEEEEEESST
T ss_pred CC-----EEEEEeCCCC
Confidence 43 5778887775
No 342
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.38 E-value=0.0064 Score=70.12 Aligned_cols=63 Identities=19% Similarity=0.172 Sum_probs=51.1
Q ss_pred cCCCCEEEEecCcccHhHHHHH-HhCC-CcEEEEEecCHHHHHHHHHHHHH--cC-CCccEEEEeCCc
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFL-VRAK-ARLVYACEWNPCAVEALKHNLQA--NS-VSDHCIVLEGDN 955 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a-~~~~-a~~V~avD~n~~ai~~~~~N~~~--N~-~~~~v~~~~~D~ 955 (1057)
+.++++|+|++|++|.+++.++ +..+ ..+|+|+|-+|.+++.+++|+++ |+ .+.++++++.-+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al 291 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGA 291 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEE
Confidence 4689999999999999999887 3344 36899999999999999999999 54 424777765443
No 343
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.35 E-value=0.45 Score=54.35 Aligned_cols=211 Identities=12% Similarity=0.083 Sum_probs=114.6
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
..++.|+.++ .+.++|..+.+....- +.....-.++..++.+++.|+.++ .+.+||..+...
T Consensus 144 ~~l~~g~~dg--------~i~iwd~~~~~~~~~~----~~h~~~v~~l~~~~~~l~sg~~dg------~i~vwd~~~~~~ 205 (435)
T 1p22_A 144 QKIVSGLRDN--------TIKIWDKNTLECKRIL----TGHTGSVLCLQYDERVIITGSSDS------TVRVWDVNTGEM 205 (435)
T ss_dssp SEEEEEESSS--------CEEEEESSSCCEEEEE----CCCSSCEEEEECCSSEEEEEETTS------CEEEEESSSCCE
T ss_pred CEEEEEeCCC--------eEEEEeCCCCeEEEEE----cCCCCcEEEEEECCCEEEEEcCCC------eEEEEECCCCcE
Confidence 3778887554 5788898876644332 111222334444777888888764 689999988765
Q ss_pred EEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEe-ecCCCCCCCcceeEEEEECCEEEEEe
Q 036185 383 TLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKEL-LINGEGPCARHSHSMLAYGSRLYMFG 461 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~-~~~g~~P~~r~~~s~~~~~~~lyv~G 461 (1057)
...- ......-.+..+++..++.|+.++ .+..||+.+..-... ... .........+..++..++.|
T Consensus 206 ~~~~-----~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~l~s~ 272 (435)
T 1p22_A 206 LNTL-----IHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDMASPTDITLRRVL---VGHRAAVNVVDFDDKYIVSA 272 (435)
T ss_dssp EEEE-----CCCCSCEEEEECCTTEEEEEETTS-----CEEEEECSSSSCCEEEEEE---CCCSSCEEEEEEETTEEEEE
T ss_pred EEEE-----cCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeCCCCCCceeeeEe---cCCCCcEEEEEeCCCEEEEE
Confidence 3332 111112233334556777777665 488899876643211 110 01111222333366667777
Q ss_pred cCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCC
Q 036185 462 GYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVC 541 (1057)
Q Consensus 462 G~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~ 541 (1057)
+.++ .+..||+.+..-...-. + ......++.+++.+++.|+.+ ..+.+||+.+..-...-...
T Consensus 273 ~~dg-----~i~vwd~~~~~~~~~~~-~----~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~h-- 335 (435)
T 1p22_A 273 SGDR-----TIKVWNTSTCEFVRTLN-G----HKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECGACLRVLEGH-- 335 (435)
T ss_dssp ETTS-----EEEEEETTTCCEEEEEE-C----CSSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECCC--
T ss_pred eCCC-----eEEEEECCcCcEEEEEc-C----CCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCCCEEEEEeCC--
Confidence 7654 48899998875443211 1 111123334456677777743 36899999876543221111
Q ss_pred CCcccceEEEEeCCEEEEEeCCC
Q 036185 542 KELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 542 ~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
...-.++..++..++.|+.+
T Consensus 336 ---~~~v~~~~~~~~~l~sg~~d 355 (435)
T 1p22_A 336 ---EELVRCIRFDNKRIVSGAYD 355 (435)
T ss_dssp ---SSCEEEEECCSSEEEEEETT
T ss_pred ---cCcEEEEEecCCEEEEEeCC
Confidence 11123344477777777754
No 344
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.33 E-value=0.66 Score=50.02 Aligned_cols=186 Identities=12% Similarity=0.137 Sum_probs=99.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCcccc-EEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGH-TSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~h-s~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+..++.|+.++ .+.++|..+.+....-. .....- +++.. ++..++.|+.++ .+.+||..+
T Consensus 35 ~~~l~s~~~dg--------~i~iw~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~~~d~------~i~vwd~~~ 96 (312)
T 4ery_A 35 GEWLASSSADK--------LIKIWGAYDGKFEKTIS----GHKLGISDVAWSSDSNLLVSASDDK------TLKIWDVSS 96 (312)
T ss_dssp SSEEEEEETTS--------CEEEEETTTCCEEEEEC----CCSSCEEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred CCEEEEeeCCC--------eEEEEeCCCcccchhhc----cCCCceEEEEEcCCCCEEEEECCCC------EEEEEECCC
Confidence 35677777544 46778887776654321 111112 22222 456777777654 688999987
Q ss_pred CcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CC
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GS 455 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~ 455 (1057)
..-...-. + ....-.++.+ ++.+++.|+.++. +.+||+.+.+-...-.. .......+.. ++
T Consensus 97 ~~~~~~~~-~----~~~~v~~~~~~~~~~~l~s~~~d~~-----i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~ 161 (312)
T 4ery_A 97 GKCLKTLK-G----HSNYVFCCNFNPQSNLIVSGSFDES-----VRIWDVKTGKCLKTLPA-----HSDPVSAVHFNRDG 161 (312)
T ss_dssp CCEEEEEE-C----CSSCEEEEEECSSSSEEEEEETTSC-----EEEEETTTCCEEEEECC-----CSSCEEEEEECTTS
T ss_pred CcEEEEEc-C----CCCCEEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCEEEEEecC-----CCCcEEEEEEcCCC
Confidence 76432210 1 1111122222 4567777777653 88999987764332211 1111122222 45
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
.+++.|+.++ .+..||+.+.+......... .. ....+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 162 ~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 162 SLIVSSSYDG-----LCRIWDTASGQCLKTLIDDD--NP--PVSFVKFSPNGKYILAATLD-----NTLKLWDYSKGKCL 227 (312)
T ss_dssp SEEEEEETTS-----CEEEEETTTCCEEEEECCSS--CC--CEEEEEECTTSSEEEEEETT-----TEEEEEETTTTEEE
T ss_pred CEEEEEeCCC-----cEEEEECCCCceeeEEeccC--CC--ceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEE
Confidence 6777887664 48899998876543211111 11 1122223 45666677632 47899999887643
Q ss_pred E
Q 036185 534 H 534 (1057)
Q Consensus 534 ~ 534 (1057)
.
T Consensus 228 ~ 228 (312)
T 4ery_A 228 K 228 (312)
T ss_dssp E
T ss_pred E
Confidence 3
No 345
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.29 E-value=0.91 Score=51.84 Aligned_cols=186 Identities=12% Similarity=0.063 Sum_probs=102.4
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEE
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWT 383 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 383 (1057)
.++.|+.++ .+.++|+.+.+....- ........++..++..++.|+.++ .+.+||+.+..-.
T Consensus 211 ~l~s~s~dg--------~i~~wd~~~~~~~~~~----~~~~~~v~~~~~~~~~l~~~~~dg------~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 211 RVVSGSRDA--------TLRVWDIETGQCLHVL----MGHVAAVRCVQYDGRRVVSGAYDF------MVKVWDPETETCL 272 (445)
T ss_dssp EEEEEETTS--------EEEEEESSSCCEEEEE----ECCSSCEEEEEECSSCEEEEETTS------CEEEEEGGGTEEE
T ss_pred EEEEEeCCC--------EEEEEECCCCcEEEEE----cCCcccEEEEEECCCEEEEEcCCC------EEEEEECCCCcEe
Confidence 566666443 5778888776543221 111112233344677777777654 5888998776533
Q ss_pred EeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecC
Q 036185 384 LLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGY 463 (1057)
Q Consensus 384 ~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~ 463 (1057)
..- ......-.+...++..++.|+.++. +..||+.+.+-...-.. ..........++..++.|+.
T Consensus 273 ~~~-----~~~~~~v~~~~~~~~~l~~~~~d~~-----i~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~~~~ 337 (445)
T 2ovr_B 273 HTL-----QGHTNRVYSLQFDGIHVVSGSLDTS-----IRVWDVETGNCIHTLTG-----HQSLTSGMELKDNILVSGNA 337 (445)
T ss_dssp EEE-----CCCSSCEEEEEECSSEEEEEETTSC-----EEEEETTTCCEEEEECC-----CCSCEEEEEEETTEEEEEET
T ss_pred EEe-----cCCCCceEEEEECCCEEEEEeCCCe-----EEEEECCCCCEEEEEcC-----CcccEEEEEEeCCEEEEEeC
Confidence 221 1111122333347777777777653 88999988764332211 11122233345556777776
Q ss_pred CCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 464 NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 464 ~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
++ .+..||+.+..-...-. + .......-.++.+++.+++.|+.+ ..+.+||+.+.+...
T Consensus 338 dg-----~i~vwd~~~~~~~~~~~-~-~~~~~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 338 DS-----TVKIWDIKTGQCLQTLQ-G-PNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFIR 396 (445)
T ss_dssp TS-----CEEEEETTTCCEEEEEC-S-TTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEE
T ss_pred CC-----eEEEEECCCCcEEEEEc-c-CCCCCCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCceee
Confidence 54 48899998765433211 1 111112233444567777777743 479999999876544
No 346
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.20 E-value=0.001 Score=74.33 Aligned_cols=65 Identities=22% Similarity=0.152 Sum_probs=52.0
Q ss_pred cCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCC
Q 036185 893 DCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPK 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~ 961 (1057)
..+|+.|||.|||+|+.++.+. ..| .+.+++|++|.+++.++++++..+.. ...++.|++++...
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~-~~g-r~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~~i~~~ 314 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAE-RES-RKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYNRILNG 314 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHH-HTT-CEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHHHHHTT
T ss_pred CCCCCEEEECCCCCCHHHHHHH-HcC-CCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHHHHHcC
Confidence 4689999999999999998876 444 56999999999999999998766653 45567777666543
No 347
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.19 E-value=0.008 Score=66.20 Aligned_cols=99 Identities=17% Similarity=0.107 Sum_probs=72.6
Q ss_pred eCCCHHHHHHHhhccCCCCEEEEecCcccHhHHHHHHhCC-CcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccc
Q 036185 879 SWGNLSEKLRMARLDCKDEVIVDLFAGIGYFVLPFLVRAK-ARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRF 957 (1057)
Q Consensus 879 ~~~~~~er~r~~~~~~~g~~VlDlf~G~G~fsl~~a~~~~-a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~ 957 (1057)
-+.+..|-...+. +.+|.+++|+-+|.|+-+..++.+.+ ..+|+|+|.+|.|++.++ ++ ..+++++++++..+
T Consensus 42 ~pVLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~ 115 (347)
T 3tka_A 42 TTVLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSA 115 (347)
T ss_dssp CCTTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGG
T ss_pred ccccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHH
Confidence 3556666544443 46889999999999999999985433 458999999999999884 33 23589999999777
Q ss_pred cCC-------CCCccEEEECCCCCChhHHHHHHH
Q 036185 958 TAP-------KGVANRVCLGLIPTSENSWVTAVQ 984 (1057)
Q Consensus 958 ~~~-------~~~~D~Vil~~~P~~~~~~~~a~~ 984 (1057)
+.. ...+|.|++|+ ..+..-+..+-|
T Consensus 116 l~~~L~~~g~~~~vDgILfDL-GVSS~QlD~~eR 148 (347)
T 3tka_A 116 LGEYVAERDLIGKIDGILLDL-GVSSPQLDDAER 148 (347)
T ss_dssp HHHHHHHTTCTTCEEEEEEEC-SCCHHHHHCGGG
T ss_pred HHHHHHhcCCCCcccEEEECC-ccCHHHhcCCCC
Confidence 532 12589999999 766554444433
No 348
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.18 E-value=0.48 Score=51.06 Aligned_cols=188 Identities=10% Similarity=-0.021 Sum_probs=98.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
..++.|+.+ ..+.+||+.+.++........... .-.+++.. ++..++.|+.++ .+.+||+.+.+
T Consensus 110 ~~l~~~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~ 174 (337)
T 1gxr_A 110 CTLIVGGEA--------STLSIWDLAAPTPRIKAELTSSAP-ACYALAISPDSKVCFSCCSDG------NIAVWDLHNQT 174 (337)
T ss_dssp SEEEEEESS--------SEEEEEECCCC--EEEEEEECSSS-CEEEEEECTTSSEEEEEETTS------CEEEEETTTTE
T ss_pred CEEEEEcCC--------CcEEEEECCCCCcceeeecccCCC-ceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCc
Confidence 466667643 368889988876443321111111 11122222 456667777543 58999998876
Q ss_pred EEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLYM 459 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv 459 (1057)
....-. ... ..-.+.+.. ++..++.|+.++ .+..||+.+.+-...... +.+ -.++.. -+++.++
T Consensus 175 ~~~~~~---~~~-~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~---~~~--v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 175 LVRQFQ---GHT-DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREGRQLQQHDF---TSQ--IFSLGYCPTGEWLA 240 (337)
T ss_dssp EEEEEC---CCS-SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEEC---SSC--EEEEEECTTSSEEE
T ss_pred eeeeee---ccc-CceEEEEECCCCCEEEEEecCC-----cEEEEECCCCceEeeecC---CCc--eEEEEECCCCCEEE
Confidence 543321 111 111222222 556677776544 488999987764433221 111 222222 2456777
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
+|+.++ .+..||+.+..-..... . ...-.++... ++.+++.|+. ...+.+||+.+.+-..
T Consensus 241 ~~~~~~-----~i~~~~~~~~~~~~~~~---~--~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 241 VGMESS-----NVEVLHVNKPDKYQLHL---H--ESCVLSLKFAYCGKWFVSTGK-----DNLLNAWRTPYGASIF 301 (337)
T ss_dssp EEETTS-----CEEEEETTSSCEEEECC---C--SSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCCEEE
T ss_pred EEcCCC-----cEEEEECCCCCeEEEcC---C--ccceeEEEECCCCCEEEEecC-----CCcEEEEECCCCeEEE
Confidence 776544 48899998765433311 1 1111222222 4666777763 2378999998876553
No 349
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.02 E-value=1.2 Score=50.82 Aligned_cols=211 Identities=10% Similarity=0.074 Sum_probs=112.2
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEE
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWT 383 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 383 (1057)
+++.|+.++ .+.++|+.+++....- ......-.++..++..++.|+.++ .+.+||+.+.+-.
T Consensus 171 ~l~s~~~dg--------~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~~~~l~s~s~dg------~i~~wd~~~~~~~ 232 (445)
T 2ovr_B 171 IIISGSTDR--------TLKVWNAETGECIHTL----YGHTSTVRCMHLHEKRVVSGSRDA------TLRVWDIETGQCL 232 (445)
T ss_dssp EEEEEETTS--------CEEEEETTTTEEEEEE----CCCSSCEEEEEEETTEEEEEETTS------EEEEEESSSCCEE
T ss_pred EEEEEeCCC--------eEEEEECCcCcEEEEE----CCCCCcEEEEEecCCEEEEEeCCC------EEEEEECCCCcEE
Confidence 777777554 5788898877543321 111112223333455566777654 6899999877643
Q ss_pred EeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecC
Q 036185 384 LLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGY 463 (1057)
Q Consensus 384 ~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~ 463 (1057)
..-. + ....-.++..++..++.|+.++ .+..||+.+.+-...-. ........+..++..++.|+.
T Consensus 233 ~~~~-~----~~~~v~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~l~~~~~ 297 (445)
T 2ovr_B 233 HVLM-G----HVAAVRCVQYDGRRVVSGAYDF-----MVKVWDPETETCLHTLQ-----GHTNRVYSLQFDGIHVVSGSL 297 (445)
T ss_dssp EEEE-C----CSSCEEEEEECSSCEEEEETTS-----CEEEEEGGGTEEEEEEC-----CCSSCEEEEEECSSEEEEEET
T ss_pred EEEc-C----CcccEEEEEECCCEEEEEcCCC-----EEEEEECCCCcEeEEec-----CCCCceEEEEECCCEEEEEeC
Confidence 3211 1 1112233344777778887765 37888987765332211 111122233347777788876
Q ss_pred CCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCC
Q 036185 464 NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKE 543 (1057)
Q Consensus 464 ~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~ 543 (1057)
++ .+..||+.+..-...-. + ......+...++..++.|+.+ ..+.+||+.+.+-...-.... .
T Consensus 298 d~-----~i~i~d~~~~~~~~~~~-~----~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~--~ 360 (445)
T 2ovr_B 298 DT-----SIRVWDVETGNCIHTLT-G----HQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPN--K 360 (445)
T ss_dssp TS-----CEEEEETTTCCEEEEEC-C----CCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTT--S
T ss_pred CC-----eEEEEECCCCCEEEEEc-C----CcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCC--C
Confidence 54 48899998776433211 1 111122333345566677633 368999997765433211111 0
Q ss_pred cccceEEEEeCCEEEEEeCCC
Q 036185 544 LFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 544 ~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
....-.++..++.+++.|+.+
T Consensus 361 ~~~~v~~~~~~~~~l~s~~~d 381 (445)
T 2ovr_B 361 HQSAVTCLQFNKNFVITSSDD 381 (445)
T ss_dssp CSSCEEEEEECSSEEEEEETT
T ss_pred CCCCEEEEEECCCEEEEEeCC
Confidence 111223444567777777654
No 350
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.98 E-value=1.1 Score=49.20 Aligned_cols=147 Identities=9% Similarity=0.074 Sum_probs=76.9
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
.++++|+.+ ..+.+||+.+.+|..+....... ..-.+++.. ++..++.|+.++ .+.+||..+..
T Consensus 21 ~~l~~~~~d--------~~v~i~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~ 85 (372)
T 1k8k_C 21 TQIAICPNN--------HEVHIYEKSGNKWVQVHELKEHN-GQVTGVDWAPDSNRIVTCGTDR------NAYVWTLKGRT 85 (372)
T ss_dssp SEEEEECSS--------SEEEEEEEETTEEEEEEEEECCS-SCEEEEEEETTTTEEEEEETTS------CEEEEEEETTE
T ss_pred CEEEEEeCC--------CEEEEEeCCCCcEEeeeeecCCC-CcccEEEEeCCCCEEEEEcCCC------eEEEEECCCCe
Confidence 577777643 36888998888765544211111 111222222 456667777543 58899998888
Q ss_pred EEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCc-EEEeecCCCCCCCcceeEEEEE-CCEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQ-WKELLINGEGPCARHSHSMLAY-GSRL 457 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~-W~~~~~~g~~P~~r~~~s~~~~-~~~l 457 (1057)
+...... ......-.++.+ +++.++.|+.++. +..||..+.. |....... .+....-.++... ++..
T Consensus 86 ~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~-----v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 86 WKPTLVI---LRINRAARCVRWAPNEKKFAVGSGSRV-----ISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEEC---CCCSSCEEEEEECTTSSEEEEEETTSS-----EEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSE
T ss_pred eeeeEEe---ecCCCceeEEEECCCCCEEEEEeCCCE-----EEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCE
Confidence 7655421 111112222222 4567777776543 6667665543 33332211 1111112223322 4567
Q ss_pred EEEecCCCCcccCcEEEEECC
Q 036185 458 YMFGGYNGEKALGDLYTFDVH 478 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~ 478 (1057)
++.|+.++ .+..||+.
T Consensus 157 l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 157 LAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEEEETTS-----CEEEEECC
T ss_pred EEEEcCCC-----CEEEEEcc
Confidence 77777654 47888854
No 351
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.93 E-value=0.43 Score=53.18 Aligned_cols=188 Identities=12% Similarity=0.139 Sum_probs=102.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+|+.|+.+ ..+.++|+.+++....- ..+. .-.+++.. +.++|+.|..+ +.+++||+.+
T Consensus 44 ~~l~~~~~~d--------~~i~v~d~~~~~~~~~~--~~~~--~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~ 105 (391)
T 1l0q_A 44 TKVYVANAHS--------NDVSIIDTATNNVIATV--PAGS--SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTS 105 (391)
T ss_dssp SEEEEEEGGG--------TEEEEEETTTTEEEEEE--ECSS--SEEEEEECTTSSEEEEEETTT------TEEEEEETTT
T ss_pred CEEEEECCCC--------CeEEEEECCCCeEEEEE--ECCC--CccceEECCCCCEEEEEECCC------CEEEEEECCC
Confidence 4677777643 36889999887754432 1111 22233333 34566665432 4699999998
Q ss_pred CcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CC
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GS 455 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~ 455 (1057)
++....... ...-.+.+.. +..+|+.++.++ .+++||+.+.+....-..+. .-..++.. +.
T Consensus 106 ~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~-----~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~dg~ 170 (391)
T 1l0q_A 106 NTVAGTVKT-----GKSPLGLALSPDGKKLYVTNNGDK-----TVSVINTVTKAVINTVSVGR-----SPKGIAVTPDGT 170 (391)
T ss_dssp TEEEEEEEC-----SSSEEEEEECTTSSEEEEEETTTT-----EEEEEETTTTEEEEEEECCS-----SEEEEEECTTSS
T ss_pred CeEEEEEeC-----CCCcceEEECCCCCEEEEEeCCCC-----EEEEEECCCCcEEEEEecCC-----CcceEEECCCCC
Confidence 876544321 1112333333 335777765443 69999999887655543221 11233332 34
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
.+|+.++.+ +.+..||+.+......... .....+++.. ++..+++++.. .....+++||+.+.+-..
T Consensus 171 ~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~~~~--~~~~~v~~~d~~~~~~~~ 238 (391)
T 1l0q_A 171 KVYVANFDS-----MSISVIDTVTNSVIDTVKV-----EAAPSGIAVNPEGTKAYVTNVD--KYFNTVSMIDTGTNKITA 238 (391)
T ss_dssp EEEEEETTT-----TEEEEEETTTTEEEEEEEC-----SSEEEEEEECTTSSEEEEEEEC--SSCCEEEEEETTTTEEEE
T ss_pred EEEEEeCCC-----CEEEEEECCCCeEEEEEec-----CCCccceEECCCCCEEEEEecC--cCCCcEEEEECCCCeEEE
Confidence 577776543 3599999998876543221 1111222222 34333444321 124589999998876443
No 352
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=95.88 E-value=0.025 Score=73.33 Aligned_cols=126 Identities=21% Similarity=0.178 Sum_probs=79.4
Q ss_pred CCEEEEecCcccHhHHHHHHhCCC-cEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc----------------
Q 036185 896 DEVIVDLFAGIGYFVLPFLVRAKA-RLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---------------- 958 (1057)
Q Consensus 896 g~~VlDlf~G~G~fsl~~a~~~~a-~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---------------- 958 (1057)
.-+++|||||+|++++-+- .+|. ..|.|+|+++.|++..+.|. . ...++++|+.++
T Consensus 851 ~l~viDLFsG~GGlslGfe-~AG~~~vv~avEid~~A~~ty~~N~-----p-~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFH-QAGISETLWAIEMWDPAAQAFRLNN-----P-GTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHH-HTTSEEEEEEECCSHHHHHHHHHHC-----T-TSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHH-HCCCCceEEEEECCHHHHHHHHHhC-----C-CCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 3479999999999999875 6776 57999999999999999883 2 245666665432
Q ss_pred CC-CCCccEEEECCCCC---C-h-----h--------HHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHH
Q 036185 959 AP-KGVANRVCLGLIPT---S-E-----N--------SWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIAR 1020 (1057)
Q Consensus 959 ~~-~~~~D~Vil~~~P~---~-~-----~--------~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 1020 (1057)
++ ...+|+|+.+| |= + + . .+...++++..-.-.+.+-+|++..--.. .....+.+.+...
T Consensus 924 lp~~~~vDvl~GGp-PCQ~FS~agr~~~~~~~d~R~~L~~~~lriv~~~rPk~fv~ENV~glls~~-~g~~~~~il~~L~ 1001 (1330)
T 3av4_A 924 LPQKGDVEMLCGGP-PCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYR-RSMVLKLTLRCLV 1001 (1330)
T ss_dssp CCCTTTCSEEEECC-CCTTTCSSSCCCHHHHHHHHHSHHHHHHHHHHHHCCSEEEEEEEGGGGTTT-TTHHHHHHHHHHH
T ss_pred ccccCccceEEecC-CCcccccccccccccccchhhHHHHHHHHHHHHhcCcEEEEeccHHHhccC-ccHHHHHHHHHHH
Confidence 11 23579999998 61 1 1 0 12233444431122477888887531100 0123455666667
Q ss_pred hcCCceeeee
Q 036185 1021 SEGHRWEVTI 1030 (1057)
Q Consensus 1021 ~~g~~~~~~~ 1030 (1057)
..|+.+...+
T Consensus 1002 ~lGY~v~~~v 1011 (1330)
T 3av4_A 1002 RMGYQCTFGV 1011 (1330)
T ss_dssp HHTCEEEEEE
T ss_pred hcCCeeeEEE
Confidence 7898765443
No 353
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=95.85 E-value=0.016 Score=62.42 Aligned_cols=103 Identities=9% Similarity=-0.053 Sum_probs=66.1
Q ss_pred hccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHH-cCCCccEE-EEeC-CccccCCCCCccEE
Q 036185 891 RLDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQA-NSVSDHCI-VLEG-DNRFTAPKGVANRV 967 (1057)
Q Consensus 891 ~~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~-N~~~~~v~-~~~~-D~~~~~~~~~~D~V 967 (1057)
..+.+|.+||||+|+.|.|+..++.+.++..|+++|+...... .... .....++. +..+ |++.+ ....+|+|
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~----~P~~~~~~~~~iv~~~~~~di~~l-~~~~~DlV 151 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHE----KPIHMQTLGWNIVKFKDKSNVFTM-PTEPSDTL 151 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSC----CCCCCCBTTGGGEEEECSCCTTTS-CCCCCSEE
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccc----ccccccccCCceEEeecCceeeec-CCCCcCEE
Confidence 3567899999999999999999885457888999999653210 0000 00011233 3322 44333 34679999
Q ss_pred EECCCCCCh----------hHHHHHHHHhhCCC-cEEEEEccc
Q 036185 968 CLGLIPTSE----------NSWVTAVQALRSEG-GTLHVHGNV 999 (1057)
Q Consensus 968 il~~~P~~~----------~~~~~a~~~l~~~g-g~l~~~~~~ 999 (1057)
+.|.-|.+- ..+.-|...|+ +| |.+.+--|.
T Consensus 152 lsD~APnsG~~~~D~~rs~~LL~~A~~~Lk-pG~G~FV~KvF~ 193 (300)
T 3eld_A 152 LCDIGESSSNPLVERDRTMKVLENFERWKH-VNTENFCVKVLA 193 (300)
T ss_dssp EECCCCCCSSHHHHHHHHHHHHHHHHHHCC-TTCCEEEEEESS
T ss_pred eecCcCCCCCHHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecc
Confidence 999888731 11444556666 68 988888777
No 354
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.84 E-value=0.25 Score=61.56 Aligned_cols=187 Identities=7% Similarity=-0.018 Sum_probs=107.1
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCc-ccc
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQP-RHR 397 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-R~~ 397 (1057)
.-+++||+.++++..+....++ ...-.+++.. ++.|++-. . +-+++||+.+++|.........+.+ ..-
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt-~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i 497 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGT-H-------AGVFVIDLASKKVIHHYDTSNSQLLENFV 497 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEE-T-------TEEEEEESSSSSCCEEECTTTSSCSCSCE
T ss_pred CCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEE-C-------CceEEEeCCCCeEEecccCccccccccee
Confidence 3578888888888876522111 1122233333 45777642 2 3589999999998877532111111 111
Q ss_pred eEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEEEEecCCCCcccCcE-EE
Q 036185 398 HAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGDL-YT 474 (1057)
Q Consensus 398 hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l-~~ 474 (1057)
.+.+.. ++.||+-. .. ..+++||+.+.+|+.......+|..... +++. .++.||+-.. +.+ ++
T Consensus 498 ~~i~~d~~g~lWigt-~~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i~-~i~~d~~g~lWi~T~-------~Glv~~ 563 (781)
T 3v9f_A 498 RSIAQDSEGRFWIGT-FG-----GGVGIYTPDMQLVRKFNQYEGFCSNTIN-QIYRSSKGQMWLATG-------EGLVCF 563 (781)
T ss_dssp EEEEECTTCCEEEEE-SS-----SCEEEECTTCCEEEEECTTTTCSCSCEE-EEEECTTSCEEEEET-------TEEEEE
T ss_pred EEEEEcCCCCEEEEE-cC-----CCEEEEeCCCCeEEEccCCCCCCCCeeE-EEEECCCCCEEEEEC-------CCceEE
Confidence 222222 45677632 21 2389999999999888653334432222 2222 2466776532 236 89
Q ss_pred EECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeec
Q 036185 475 FDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKL 537 (1057)
Q Consensus 475 yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~ 537 (1057)
||+.+.++........+|.... .+++.- ++.|++.+. +.+.+||+++.+++....
T Consensus 564 ~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 564 PSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISCYITSKKCFYTYDH 619 (781)
T ss_dssp SCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEEEETTTTEEEEECG
T ss_pred ECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEEEECCCCceEEecc
Confidence 9999998887654333444333 333333 567776542 368999999999988754
No 355
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.73 E-value=0.55 Score=50.21 Aligned_cols=147 Identities=8% Similarity=0.013 Sum_probs=95.9
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.||+..|..+ .+..+|+.+++-..-- ++..-++.+++..+++||+....+ +.+++||+.+.+-
T Consensus 66 ~Ly~stG~~g--------~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~------~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 66 HFFESTGHQG--------TLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTE------GLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEEETTTT--------EEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSS------CEEEEEETTTTEE
T ss_pred EEEEEcCCCC--------EEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccC------CEEEEEECCcCcE
Confidence 5999999654 2889999988643321 344445667888899999985532 5899999998765
Q ss_pred E-EeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEE-eecCCCCCCCcce-eEEEEECCEEEE
Q 036185 383 T-LLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKE-LLINGEGPCARHS-HSMLAYGSRLYM 459 (1057)
Q Consensus 383 ~-~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~-~~~~g~~P~~r~~-~s~~~~~~~lyv 459 (1057)
. .++ .+-.+.+.+..++++|+.-| .+.++.+|+.+.+-.. +.. +.-+.+... --+...+++||+
T Consensus 129 ~~ti~------~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v~~~I~V-~~~g~~v~~lNeLe~~dG~lya 195 (268)
T 3nok_A 129 ERTTR------YSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFALVGAVQV-KLRGQPVELINELECANGVIYA 195 (268)
T ss_dssp EEEEE------CSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCEEEEEEC-EETTEECCCEEEEEEETTEEEE
T ss_pred EEEEe------CCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeEEEEEEe-CCCCcccccccccEEeCCEEEE
Confidence 3 333 12235566677888999765 3469999999976543 332 111222111 234456888885
Q ss_pred EecCCCCcccCcEEEEECCCCeEEE
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKK 484 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~ 484 (1057)
-- + ..++|.+.|+.+.+-..
T Consensus 196 nv-w----~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 196 NI-W----HSSDVLEIDPATGTVVG 215 (268)
T ss_dssp EE-T----TCSEEEEECTTTCBEEE
T ss_pred EE-C----CCCeEEEEeCCCCcEEE
Confidence 32 2 24689999999987443
No 356
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.73 E-value=2.9 Score=45.26 Aligned_cols=194 Identities=12% Similarity=0.080 Sum_probs=102.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcE-EEeccCCCCC-----CccccEEEEE--CCEEEEEcccCCCCCCCCcEE
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTI-KAIHTEGSPS-----PRLGHTSSLI--GDHMFIIGGRADPLNILSDVW 373 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W-~~l~~~~~P~-----~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~ 373 (1057)
+.+|+.++.+ +.++.+|+.+++. ..++...... +..-+.++.. ++.+|+.+... ...++
T Consensus 101 ~~l~v~~~~~--------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~ 167 (353)
T 3vgz_A 101 QTLWFGNTVN--------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-----ESVIW 167 (353)
T ss_dssp TEEEEEETTT--------TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-----SCEEE
T ss_pred CEEEEEecCC--------CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-----CceEE
Confidence 4577776532 4789999988764 3333211111 1112334443 45788776322 24699
Q ss_pred EEECCCCcEEEeec-cCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEE
Q 036185 374 VFNMAKSKWTLLEC-SGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSM 450 (1057)
Q Consensus 374 ~yd~~t~~W~~~~~-~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~ 450 (1057)
+||+.+.+-...-. .+ ..-+..++. ++.+|+... .+.++.||+.+.+-......+..........+
T Consensus 168 ~~d~~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 236 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTG-----KMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINI 236 (353)
T ss_dssp EEETTTTEEEEEECCCC-----TTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEE
T ss_pred EEcCCCCceEEEecCCC-----CccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceE
Confidence 99998876543321 11 111223333 345666543 24688999988765433222111111122233
Q ss_pred EEE--CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEE
Q 036185 451 LAY--GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLD 526 (1057)
Q Consensus 451 ~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd 526 (1057)
+.. ++.+|+.... .+.++.||+.+.+....... +.+ ..++.. ++.+|+.+.. .+.++++|
T Consensus 237 ~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~---~~~---~~~~~s~dg~~l~v~~~~-----~~~v~~~d 300 (353)
T 3vgz_A 237 SLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAA---PES---LAVLFNPARNEAYVTHRQ-----AGKVSVID 300 (353)
T ss_dssp EEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEEC---SSC---CCEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred EECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEc---CCC---ceEEECCCCCEEEEEECC-----CCeEEEEE
Confidence 333 4457666432 35699999988776543222 222 122222 4567776542 35899999
Q ss_pred CCCCeEEEe
Q 036185 527 LQLHIWKHL 535 (1057)
Q Consensus 527 ~~~~~W~~v 535 (1057)
+.+.+....
T Consensus 301 ~~~~~~~~~ 309 (353)
T 3vgz_A 301 AKSYKVVKT 309 (353)
T ss_dssp TTTTEEEEE
T ss_pred CCCCeEEEE
Confidence 998876543
No 357
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.67 E-value=0.078 Score=55.88 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=63.3
Q ss_pred ccCCCCEEEEecCcccHhHHHHHHhCCC----cEEEEEe--cCHHHHHHHHHHHHHcCCCccEEEEeC-CccccCCCCCc
Q 036185 892 LDCKDEVIVDLFAGIGYFVLPFLVRAKA----RLVYACE--WNPCAVEALKHNLQANSVSDHCIVLEG-DNRFTAPKGVA 964 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~G~fsl~~a~~~~a----~~V~avD--~n~~ai~~~~~N~~~N~~~~~v~~~~~-D~~~~~~~~~~ 964 (1057)
++++|.+||||+|+-|.++..++.+.+. ..|+|+| +.|-... -.|+. -+.++++ |.++. ...++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv~-~i~~~~G~Df~~~-~~~~~ 140 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGWN-IVTMKSGVDVFYK-PSEIS 140 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTGG-GEEEECSCCGGGS-CCCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCce-EEEeeccCCccCC-CCCCC
Confidence 5789999999999999999998844223 2466666 2221100 01221 2456668 99884 34569
Q ss_pred cEEEECCCCCCh----------hHHHHHHHHhhCCCc-EEEEEcccc
Q 036185 965 NRVCLGLIPTSE----------NSWVTAVQALRSEGG-TLHVHGNVK 1000 (1057)
Q Consensus 965 D~Vil~~~P~~~----------~~~~~a~~~l~~~gg-~l~~~~~~~ 1000 (1057)
|+|+.|.-|.+- ..+.-|...|+ +|| .+.+--|..
T Consensus 141 DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk-~gG~~FvvKVFqg 186 (269)
T 2px2_A 141 DTLLCDIGESSPSAEIEEQRTLRILEMVSDWLS-RGPKEFCIKILCP 186 (269)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHT-TCCSEEEEEESCT
T ss_pred CEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhh-cCCcEEEEEECCC
Confidence 999999888641 11334445666 577 777777764
No 358
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.60 E-value=3.3 Score=44.88 Aligned_cols=204 Identities=12% Similarity=0.081 Sum_probs=104.4
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+|+....+. .....+.++++|+.+.+....- .. ...-+.++.. ++++|+.++.+ +.+++||+.+
T Consensus 53 ~~l~~~~~~~~--~~~~~~~v~~~d~~~~~~~~~~--~~--~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~ 120 (353)
T 3vgz_A 53 NALWLATSQSR--KLDKGGVVYRLDPVTLEVTQAI--HN--DLKPFGATINNTTQTLWFGNTVN------SAVTAIDAKT 120 (353)
T ss_dssp TEEEEEECCCT--TTEESEEEEEECTTTCCEEEEE--EE--SSCCCSEEEETTTTEEEEEETTT------TEEEEEETTT
T ss_pred CEEEEEcCCCc--CCCCCccEEEEcCCCCeEEEEE--ec--CCCcceEEECCCCCEEEEEecCC------CEEEEEeCCC
Confidence 56776654322 1123568999999887644322 11 1112233333 34688876543 3799999988
Q ss_pred CcEEEeeccCCCCC-----cccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeec-CCCCCCCcceeEEE
Q 036185 380 SKWTLLECSGSVFQ-----PRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLI-NGEGPCARHSHSML 451 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~-----~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~-~g~~P~~r~~~s~~ 451 (1057)
.+-...-..+.... +..-+..++. ++.+|+.+... -..++.||+.+.+-...-. .+..| .+.+..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~s 193 (353)
T 3vgz_A 121 GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKMS---TGLALD 193 (353)
T ss_dssp CCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTTC---CCCEEE
T ss_pred CeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCcc---ceEEEC
Confidence 77433221111111 1112333333 35677766322 2359999998876544322 22111 111122
Q ss_pred EECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 452 AYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 452 ~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
..++.+|+... .+.++.||+.+.+-......+.........+++.. ++.+|+.+. ..+.+++||+.+
T Consensus 194 ~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----~~~~v~~~d~~~ 262 (353)
T 3vgz_A 194 SEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS-----KAAEVLVVDTRN 262 (353)
T ss_dssp TTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES-----SSSEEEEEETTT
T ss_pred CCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC-----CCCEEEEEECCC
Confidence 22345666543 24688999998765432222221112222233333 456766643 235899999988
Q ss_pred CeEEEe
Q 036185 530 HIWKHL 535 (1057)
Q Consensus 530 ~~W~~v 535 (1057)
.+....
T Consensus 263 ~~~~~~ 268 (353)
T 3vgz_A 263 GNILAK 268 (353)
T ss_dssp CCEEEE
T ss_pred CcEEEE
Confidence 776543
No 359
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.50 E-value=1.3 Score=47.50 Aligned_cols=190 Identities=13% Similarity=0.073 Sum_probs=98.0
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
.+++.|+.++ .+.+||..+.+....-. . ... .-.++... ++..++.|+.++ .+.+||+.+.+
T Consensus 78 ~~l~s~~~d~--------~i~vwd~~~~~~~~~~~-~-~~~-~v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~ 140 (312)
T 4ery_A 78 NLLVSASDDK--------TLKIWDVSSGKCLKTLK-G-HSN-YVFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGK 140 (312)
T ss_dssp SEEEEEETTS--------EEEEEETTTCCEEEEEE-C-CSS-CEEEEEECSSSSEEEEEETTS------CEEEEETTTCC
T ss_pred CEEEEECCCC--------EEEEEECCCCcEEEEEc-C-CCC-CEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCE
Confidence 5777777543 57888887765432210 1 111 11112222 456677777654 58999998776
Q ss_pred EEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYM 459 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv 459 (1057)
-...- +.....-.+..+ ++.+++.|+.++ .+..||+.+.+....-... ..+........-+++.++
T Consensus 141 ~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~ 208 (312)
T 4ery_A 141 CLKTL-----PAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYIL 208 (312)
T ss_dssp EEEEE-----CCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEE
T ss_pred EEEEe-----cCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEE
Confidence 43321 111111222223 456777787665 4889999887654332111 111111111222456666
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEE-ECCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFL-YKNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~-~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
.|+.++ .+..||+.+..-...-. +............. .++.+++.|+.+ ..+.+||+.+..-
T Consensus 209 ~~~~d~-----~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 271 (312)
T 4ery_A 209 AATLDN-----TLKLWDYSKGKCLKTYT-GHKNEKYCIFANFSVTGGKWIVSGSED-----NLVYIWNLQTKEI 271 (312)
T ss_dssp EEETTT-----EEEEEETTTTEEEEEEC-SSCCSSSCCCEEEECSSSCEEEECCTT-----SCEEEEETTTCCE
T ss_pred EEcCCC-----eEEEEECCCCcEEEEEE-ecCCceEEEEEEEEeCCCcEEEEECCC-----CEEEEEECCCchh
Confidence 776553 58899998876443211 11111111111222 256677777743 3688999988754
No 360
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.44 E-value=0.77 Score=57.29 Aligned_cols=185 Identities=11% Similarity=0.083 Sum_probs=104.0
Q ss_pred cEEEEeCCCCcEEEeccCCCCCC-ccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCC-CCcccc
Q 036185 321 DLFLLDPLQGTIKAIHTEGSPSP-RLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSV-FQPRHR 397 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~~P~~-R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~-p~~R~~ 397 (1057)
-+++||+.++++..+.......+ ..-.++... ++.|++-. . +.+++||+.+++|+........ ..+...
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S-------SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c-------CceeEEeCCCCeEEEccccccccccCCce
Confidence 47899999998888753211111 111222222 45677643 2 2489999999999887532100 111111
Q ss_pred eEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecC---CCCCCCcceeEEEE-ECCEEEEEecCCCCcccCc
Q 036185 398 HAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLIN---GEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGD 471 (1057)
Q Consensus 398 hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~---g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~ 471 (1057)
-.+... ++.+|+-.. . .+++||+.+.++ ..... ..++.. .-.+++. .++.|++-.. +.
T Consensus 500 i~~i~~d~~g~lWigt~-~------Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~-------~G 563 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE-E------GLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR-------EG 563 (795)
T ss_dssp EEEEEECTTCCEEEEES-S------CEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES-------SC
T ss_pred EEEEEECCCCCEEEEeC-C------ceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC-------CC
Confidence 112222 456777432 2 389999999888 54321 111111 1122222 2466776432 13
Q ss_pred EEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeec
Q 036185 472 LYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKL 537 (1057)
Q Consensus 472 l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~ 537 (1057)
+++||+.+.++........+|.... .+++.- ++.|++.+. +.+.+||+++.+++....
T Consensus 564 l~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN-------RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET-------TEEEEEETTTTEEEEECG
T ss_pred ceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC-------CceEEEcCCCCcEEEcCC
Confidence 8999999999987654333444332 233322 467777543 478999999999987753
No 361
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=95.42 E-value=0.02 Score=64.24 Aligned_cols=60 Identities=17% Similarity=0.162 Sum_probs=51.2
Q ss_pred CCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc
Q 036185 895 KDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT 958 (1057)
Q Consensus 895 ~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~ 958 (1057)
+++.|||++.|.|.++..++.+.++++|+|+|+++..+..+++.. . .++++++++|+.++
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 368999999999999999985445778999999999999999876 2 24799999999765
No 362
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.22 Score=61.89 Aligned_cols=191 Identities=8% Similarity=-0.005 Sum_probs=100.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--C--CEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--G--DHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~--~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
+..++.||.++ .+.+||..+.++..+... ......-.++.+ + +..++.||.++ .+.+||+
T Consensus 21 g~~latg~~dg--------~I~vwd~~~~~~~~~~~l--~~h~~~V~~l~~s~~~~~~~l~s~s~Dg------~I~vwd~ 84 (753)
T 3jro_A 21 GKRLATCSSDK--------TIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILASCSYDG------KVLIWKE 84 (753)
T ss_dssp SCCEEEEETTT--------EEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCTTSCSEEEEEETTS------CEEEEEE
T ss_pred CCeEEEEECCC--------cEEEEecCCCCCccceec--cCCcCceEEEEecCCCCCCEEEEEeCCC------eEEEEEC
Confidence 34677777543 577788776666655422 222222223332 2 56777777654 6899999
Q ss_pred CCCcEEEeeccCCCCCcccceEEEEE--C--CEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 036185 378 AKSKWTLLECSGSVFQPRHRHAAAVI--G--SKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY 453 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~~R~~hsa~~~--~--~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~ 453 (1057)
.++.|..+... ......-.++.+ + +.+++.|+.++ .+.+||+.+..-.........+.+ -.++...
T Consensus 85 ~~~~~~~~~~~---~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~~~~~~~~~~~~~~~--v~~l~~~ 154 (753)
T 3jro_A 85 ENGRWSQIAVH---AVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKENGTTSPIIIDAHAIG--VNSASWA 154 (753)
T ss_dssp ETTEEEEEEEE---CCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSSSCCCCEEEECCSSC--EEEEEEC
T ss_pred CCCcccccccc---cCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecCCCcceeEeecCCCc--eEEEEec
Confidence 99988776532 112222223333 3 56788887665 488888876521111000001111 1122222
Q ss_pred --------------CCEEEEEecCCCCcccCcEEEEECCCC--eEEEeeccCCCCCCceeeEEEEE-C---CEEEEEecc
Q 036185 454 --------------GSRLYMFGGYNGEKALGDLYTFDVHAC--LWKKEDIAARSPHARFSHTMFLY-K---NYLGLFGGC 513 (1057)
Q Consensus 454 --------------~~~lyv~GG~~~~~~~~~l~~yd~~t~--~W~~v~~~~~~P~~R~~hs~~~~-~---~~l~i~GG~ 513 (1057)
++.+++.|+.++ .+..||+.+. .+.......... ..-.+++.. + +.+++.||.
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~~~~~~~~~~~~~h~--~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp CCC---------CGGGCCEEEEETTS-----CEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEEES
T ss_pred CcccccccccccCCCCCEEEEEECCC-----eEEEEeccCCcccceeeeeecCCC--CcEEEEEeccCCCCCCEEEEEec
Confidence 356777777665 3777777554 444432211111 111222222 3 688888885
Q ss_pred CCCCCCCeEEEEECCCC
Q 036185 514 PVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 514 ~~~~~~~~i~~yd~~~~ 530 (1057)
++ .+.+||+.+.
T Consensus 228 Dg-----~I~iwd~~~~ 239 (753)
T 3jro_A 228 DR-----TCIIWTQDNE 239 (753)
T ss_dssp SS-----CEEEEEESSS
T ss_pred CC-----EEEEecCCCC
Confidence 33 5788887764
No 363
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=95.19 E-value=1.3 Score=49.70 Aligned_cols=219 Identities=13% Similarity=0.034 Sum_probs=110.7
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.+++.|+.++ .+.+||+.+.+....- ........++..++.+++.|+.++ .+.+||+.+..-
T Consensus 147 ~~l~~~~~dg--------~i~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~ 208 (401)
T 4aez_A 147 SFLSVGLGNG--------LVDIYDVESQTKLRTM----AGHQARVGCLSWNRHVLSSGSRSG------AIHHHDVRIANH 208 (401)
T ss_dssp SEEEEEETTS--------CEEEEETTTCCEEEEE----CCCSSCEEEEEEETTEEEEEETTS------EEEEEETTSSSC
T ss_pred CEEEEECCCC--------eEEEEECcCCeEEEEe----cCCCCceEEEEECCCEEEEEcCCC------CEEEEecccCcc
Confidence 4667776443 5788898877644322 111222233344566777777654 688999874332
Q ss_pred EEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCEEEE
Q 036185 383 TLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GSRLYM 459 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~~lyv 459 (1057)
......+ ....-.+.+.. ++..++.|+.++ .+.+||+.+..-...-.. ....-.+++.. +..+++
T Consensus 209 ~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ll~ 276 (401)
T 4aez_A 209 QIGTLQG---HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKTN----HNAAVKAVAWCPWQSNLLA 276 (401)
T ss_dssp EEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEECC----CSSCCCEEEECTTSTTEEE
T ss_pred eeeEEcC---CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEecC----CcceEEEEEECCCCCCEEE
Confidence 2111111 11111122222 566777887665 488999987654332211 11111223332 446777
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE---CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY---KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~---~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
.||.. .-..+..||+.+......... .. ...++.+ +..+++.+|.. ...+.+||+.+.......
T Consensus 277 ~~~gs---~d~~i~i~d~~~~~~~~~~~~---~~---~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 277 TGGGT---MDKQIHFWNAATGARVNTVDA---GS---QVTSLIWSPHSKEIMSTHGFP----DNNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp EECCT---TTCEEEEEETTTCCEEEEEEC---SS---CEEEEEECSSSSEEEEEECTT----TCEEEEEEEETTEEEEEE
T ss_pred EecCC---CCCEEEEEECCCCCEEEEEeC---CC---cEEEEEECCCCCeEEEEeecC----CCcEEEEecCCccceeEE
Confidence 77521 123589999987765433111 11 1222233 34455554532 347899999887776653
Q ss_pred ccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 537 LNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 537 ~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
.... ......+.+...++.+++.||.+.
T Consensus 344 ~~~~-h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 344 DIPA-HDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEC-CSSCCCEEEECTTSSEEEEECTTS
T ss_pred EecC-CCCCEEEEEECCCCCEEEEEeCCC
Confidence 2111 111222233333566777777543
No 364
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.13 E-value=0.5 Score=54.04 Aligned_cols=198 Identities=8% Similarity=0.053 Sum_probs=108.0
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CC-EEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GD-HMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~-~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++++.+. ....++++|+.+++...+. ..+. ...+.+.. ++ +|++.+..++ ...+|++|+.+.
T Consensus 191 ~~la~~s~~~-----~~~~i~~~d~~tg~~~~l~--~~~~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~ 257 (415)
T 2hqs_A 191 SKLAYVTFES-----GRSALVIQTLANGAVRQVA--SFPR--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASG 257 (415)
T ss_dssp SEEEEEECTT-----SSCEEEEEETTTCCEEEEE--CCSS--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTC
T ss_pred CEEEEEEecC-----CCcEEEEEECCCCcEEEee--cCCC--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCC
Confidence 4566666443 1357999999998877664 2221 22223332 34 4554544322 247999999998
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLY 458 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~ly 458 (1057)
....+.. .+ ....+.+.. +++.+++++..+ ....++.+|+.+.....+... .....+.+. -+++.+
T Consensus 258 ~~~~l~~---~~--~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l 325 (415)
T 2hqs_A 258 QIRQVTD---GR--SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFM 325 (415)
T ss_dssp CEEECCC---CS--SCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEE
T ss_pred CEEeCcC---CC--CcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEE
Confidence 8766541 11 111122222 455444444321 124689999988876554321 112222222 245555
Q ss_pred EEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 459 MFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 459 v~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
++++.++. ...++.+|+.+.....+... . ......+ ++..+++++.... ...+|++|+.......++
T Consensus 326 ~~~~~~~g--~~~i~~~d~~~~~~~~l~~~-----~--~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 326 VMVSSNGG--QQHIAKQDLATGGVQVLSST-----F--LDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEECSS--CEEEEEEETTTCCEEECCCS-----S--SCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEEECC
T ss_pred EEEECcCC--ceEEEEEECCCCCEEEecCC-----C--CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEEEee
Confidence 55554321 34699999999888665221 1 1122223 5666666664322 337999999888777765
No 365
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.11 E-value=0.27 Score=54.12 Aligned_cols=198 Identities=10% Similarity=0.087 Sum_probs=101.8
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--C--CEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--G--DHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~--~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
+.+++.|+.++ .+.++|..+++|..+... ........++.+ + +.+++.|+.++ .+.+||.
T Consensus 69 ~~~l~s~~~dg--------~v~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~ 132 (379)
T 3jrp_A 69 GTILASCSYDG--------KVLIWKEENGRWSQIAVH--AVHSASVNSVQWAPHEYGPLLLVASSDG------KVSVVEF 132 (379)
T ss_dssp CSEEEEEETTS--------CEEEEEEETTEEEEEEEE--CCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEEC
T ss_pred CCEEEEeccCC--------EEEEEEcCCCceeEeeee--cCCCcceEEEEeCCCCCCCEEEEecCCC------cEEEEec
Confidence 35777777554 578889888887665422 111122222222 2 56777777654 6888888
Q ss_pred CCCcE-EEeeccCCCCCcccceEEEEE--------------CCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCC
Q 036185 378 AKSKW-TLLECSGSVFQPRHRHAAAVI--------------GSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGE 440 (1057)
Q Consensus 378 ~t~~W-~~~~~~g~~p~~R~~hsa~~~--------------~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~ 440 (1057)
.+... ......+ ....-.+.+.. ++.+++.|+.++ .+.+||+.+.. |........
T Consensus 133 ~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 133 KENGTTSPIIIDA---HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp CTTSCCCEEEEEC---CTTCEEEEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETTTTEEEEEEEECC
T ss_pred CCCCceeeEEecC---CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCCCcceeeEEEEec
Confidence 77632 1111111 01111122222 367788887765 37788876543 544433211
Q ss_pred CCCCcceeEEEEE-C---CEEEEEecCCCCcccCcEEEEECCCCe--EEEeeccCCCCCCceeeEEEEE--CCEEEEEec
Q 036185 441 GPCARHSHSMLAY-G---SRLYMFGGYNGEKALGDLYTFDVHACL--WKKEDIAARSPHARFSHTMFLY--KNYLGLFGG 512 (1057)
Q Consensus 441 ~P~~r~~~s~~~~-~---~~lyv~GG~~~~~~~~~l~~yd~~t~~--W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG 512 (1057)
....-.+++.. + +.+++.|+.++ .+..||+.+.. +..... ....... .-..+.+ ++.+++.|+
T Consensus 205 --h~~~v~~~~~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~-~~~~~~~-~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 205 --HSDWVRDVAWSPTVLLRSYLASVSQDR-----TCIIWTQDNEQGPWKKTLL-KEEKFPD-VLWRASWSLSGNVLALSG 275 (379)
T ss_dssp --CSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEES-SSSCCSS-CEEEEEECSSSCCEEEEE
T ss_pred --ccCcEeEEEECCCCCCCCeEEEEeCCC-----EEEEEeCCCCCccceeeee-ccccCCC-cEEEEEEcCCCCEEEEec
Confidence 11111223332 3 67888888765 37788877653 221111 1111111 1222223 566777776
Q ss_pred cCCCCCCCeEEEEECC-CCeEEEeec
Q 036185 513 CPVRQNYQELSLLDLQ-LHIWKHLKL 537 (1057)
Q Consensus 513 ~~~~~~~~~i~~yd~~-~~~W~~v~~ 537 (1057)
.+ ..+.+||+. ...|..+..
T Consensus 276 ~d-----g~i~iw~~~~~~~~~~~~~ 296 (379)
T 3jrp_A 276 GD-----NKVTLWKENLEGKWEPAGE 296 (379)
T ss_dssp SS-----SSEEEEEEEETTEEEEEEE
T ss_pred CC-----CcEEEEeCCCCCccccccc
Confidence 43 357777776 568887764
No 366
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.07 E-value=0.015 Score=64.49 Aligned_cols=54 Identities=22% Similarity=0.277 Sum_probs=41.7
Q ss_pred HHhh-ccCCCCEEEEecCcccHhHHHHHHhCCCcEEEEEecCH---HHHHHHHHHHHHcC
Q 036185 888 RMAR-LDCKDEVIVDLFAGIGYFVLPFLVRAKARLVYACEWNP---CAVEALKHNLQANS 943 (1057)
Q Consensus 888 r~~~-~~~~g~~VlDlf~G~G~fsl~~a~~~~a~~V~avD~n~---~ai~~~~~N~~~N~ 943 (1057)
+++. ...+|+.|||.|||+|+.++.+. ..| .+.+++|++| ..++.++++++..+
T Consensus 234 ~~i~~~~~~~~~vlDpF~GsGtt~~aa~-~~~-r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 234 RLVRALSHPGSTVLDFFAGSGVTARVAI-QEG-RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHSCTTCEEEETTCTTCHHHHHHH-HHT-CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHhCCCCCEEEecCCCCCHHHHHHH-HcC-CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 3443 34689999999999999998887 344 4699999999 99999999987655
No 367
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.06 E-value=1.2 Score=50.35 Aligned_cols=195 Identities=10% Similarity=0.038 Sum_probs=103.4
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccC-CCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTE-GSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~-~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
+.+|+.|+.+ ..+.++|+.+++....... ....+......+.+ ++.+|+.|+.++ .+.+||+.
T Consensus 134 ~~~~~~~~~~--------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~------~v~~~d~~ 199 (433)
T 3bws_A 134 TRLAIPLLED--------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN------AVHVFDLK 199 (433)
T ss_dssp SEEEEEBTTS--------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT------EEEEEETT
T ss_pred CeEEEEeCCC--------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC------EEEEEECC
Confidence 3577777643 3589999998877654311 11111111222233 678888877543 69999998
Q ss_pred CCcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC
Q 036185 379 KSKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GS 455 (1057)
Q Consensus 379 t~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~ 455 (1057)
+.+....-. .....-.+.+.. ++.+|+.++.++ .+..||+.+.+....-. ....-.+++.. ++
T Consensus 200 ~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~-----~i~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g 265 (433)
T 3bws_A 200 TLAYKATVD----LTGKWSKILLYDPIRDLVYCSNWISE-----DISVIDRKTKLEIRKTD-----KIGLPRGLLLSKDG 265 (433)
T ss_dssp TCCEEEEEE----CSSSSEEEEEEETTTTEEEEEETTTT-----EEEEEETTTTEEEEECC-----CCSEEEEEEECTTS
T ss_pred CceEEEEEc----CCCCCeeEEEEcCCCCEEEEEecCCC-----cEEEEECCCCcEEEEec-----CCCCceEEEEcCCC
Confidence 866433221 111112233333 345766665443 58999998886644322 11122233332 44
Q ss_pred EEEEEecCCCCcc---cCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCC
Q 036185 456 RLYMFGGYNGEKA---LGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 456 ~lyv~GG~~~~~~---~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
+.+++++...... -..++.||+.+.......... ....+++.. +..+|+.++. ...+.+||+.+.
T Consensus 266 ~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~-----~~~v~v~d~~~~ 335 (433)
T 3bws_A 266 KELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP-----GNKRHIVSGNTENKIYVSDMC-----CSKIEVYDLKEK 335 (433)
T ss_dssp SEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-----ECEEEEEECSSTTEEEEEETT-----TTEEEEEETTTT
T ss_pred CEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-----CCcceEEECCCCCEEEEEecC-----CCEEEEEECCCC
Confidence 4444544422211 246899999887654431111 111122222 3467777653 347999999887
Q ss_pred eEEE
Q 036185 531 IWKH 534 (1057)
Q Consensus 531 ~W~~ 534 (1057)
+-..
T Consensus 336 ~~~~ 339 (433)
T 3bws_A 336 KVQK 339 (433)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6543
No 368
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.03 E-value=1 Score=49.73 Aligned_cols=181 Identities=4% Similarity=-0.016 Sum_probs=91.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++.||.++ .+.++|..++.|.............-.+++.. ++..++.|+.++ .+.+||..+.
T Consensus 28 g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~ 93 (345)
T 3fm0_A 28 GTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQD 93 (345)
T ss_dssp SSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC
T ss_pred CCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCC
Confidence 35778888654 46777877777653321110111111122222 456777777654 5778888887
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCC-cEEEeecCCCCCCCcceeEEEE-ECCE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTL-QWKELLINGEGPCARHSHSMLA-YGSR 456 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~-~W~~~~~~g~~P~~r~~~s~~~-~~~~ 456 (1057)
.+..+... ......-.++.+ ++++++.|+.++. +.+||+.+. .+..+....... ..-.+++. -++.
T Consensus 94 ~~~~~~~~---~~h~~~v~~v~~sp~~~~l~s~s~D~~-----v~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 94 DFECVTTL---EGHENEVKSVAWAPSGNLLATCSRDKS-----VWVWEVDEEDEYECVSVLNSHT--QDVKHVVWHPSQE 163 (345)
T ss_dssp -EEEEEEE---CCCSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECTTSCEEEEEEECCCC--SCEEEEEECSSSS
T ss_pred CeEEEEEc---cCCCCCceEEEEeCCCCEEEEEECCCe-----EEEEECCCCCCeEEEEEecCcC--CCeEEEEECCCCC
Confidence 77655321 111111122222 5667778877653 788887654 333332211101 11112222 2456
Q ss_pred EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccC
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCP 514 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~ 514 (1057)
+++.|+.++ .+..||..+..|.......... ..-.++.+ ++..++.|+.+
T Consensus 164 ~l~s~s~d~-----~i~~w~~~~~~~~~~~~~~~h~---~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 164 LLASASYDD-----TVKLYREEEDDWVCCATLEGHE---STVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp CEEEEETTS-----CEEEEEEETTEEEEEEEECCCS---SCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEeCCC-----cEEEEEecCCCEEEEEEecCCC---CceEEEEECCCCCEEEEEeCC
Confidence 777777665 4788888888887543221111 11122223 56677777743
No 369
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.00 E-value=1.3 Score=47.52 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=80.6
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEE-EEE-CCEEEEEcccCCCcccceEEEEECCCC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAA-AVI-GSKIYVFGGLNNDTIFSSLHVLDTDTL 430 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa-~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~ 430 (1057)
++..++.|+.++ .+.+||+.+..+...... ........+ +.. +++.++.|+.++ .+..||+.+.
T Consensus 108 ~~~~l~~~~~d~------~i~~~d~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~ 173 (337)
T 1gxr_A 108 DGCTLIVGGEAS------TLSIWDLAAPTPRIKAEL---TSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQ 173 (337)
T ss_dssp TSSEEEEEESSS------EEEEEECCCC--EEEEEE---ECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTT
T ss_pred CCCEEEEEcCCC------cEEEEECCCCCcceeeec---ccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCC
Confidence 456666776543 699999988875443311 111111222 222 556777777654 4889999887
Q ss_pred cEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEE
Q 036185 431 QWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLG 508 (1057)
Q Consensus 431 ~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~ 508 (1057)
+....-.. .. ..-.++... ++..++.|+.++ .+..||+.+..-..... .+.+ ..+++.. ++..+
T Consensus 174 ~~~~~~~~---~~-~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~---~~~~--v~~~~~s~~~~~l 239 (337)
T 1gxr_A 174 TLVRQFQG---HT-DGASCIDISNDGTKLWTGGLDN-----TVRSWDLREGRQLQQHD---FTSQ--IFSLGYCPTGEWL 239 (337)
T ss_dssp EEEEEECC---CS-SCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEEEE---CSSC--EEEEEECTTSSEE
T ss_pred ceeeeeec---cc-CceEEEEECCCCCEEEEEecCC-----cEEEEECCCCceEeeec---CCCc--eEEEEECCCCCEE
Confidence 65443221 11 112222222 556777777543 58899998876443311 1111 1222222 55667
Q ss_pred EEeccCCCCCCCeEEEEECCCCeEEEe
Q 036185 509 LFGGCPVRQNYQELSLLDLQLHIWKHL 535 (1057)
Q Consensus 509 i~GG~~~~~~~~~i~~yd~~~~~W~~v 535 (1057)
++|+.+ ..+.+||+.+..-..+
T Consensus 240 ~~~~~~-----~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 240 AVGMES-----SNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EEEETT-----SCEEEEETTSSCEEEE
T ss_pred EEEcCC-----CcEEEEECCCCCeEEE
Confidence 777632 3689999988764443
No 370
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.96 E-value=1.1 Score=51.14 Aligned_cols=183 Identities=14% Similarity=0.137 Sum_probs=99.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
.+++.|+.++ .+.++|..+++....- ......-.++...+..++.|+.++ .+.+||..+..-
T Consensus 184 ~~l~sg~~dg--------~i~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~l~s~s~dg------~i~vwd~~~~~~ 245 (435)
T 1p22_A 184 RVIITGSSDS--------TVRVWDVNTGEMLNTL----IHHCEAVLHLRFNNGMMVTCSKDR------SIAVWDMASPTD 245 (435)
T ss_dssp SEEEEEETTS--------CEEEEESSSCCEEEEE----CCCCSCEEEEECCTTEEEEEETTS------CEEEEECSSSSC
T ss_pred CEEEEEcCCC--------eEEEEECCCCcEEEEE----cCCCCcEEEEEEcCCEEEEeeCCC------cEEEEeCCCCCC
Confidence 3778887554 5788898887644322 111222233344555677777654 688999876542
Q ss_pred EEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEec
Q 036185 383 TLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGG 462 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG 462 (1057)
..... ........-.+...++..++.|+.++ .+.+||+.+.+-...-.. ......++..++..++.|+
T Consensus 246 ~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~l~~g~ 313 (435)
T 1p22_A 246 ITLRR--VLVGHRAAVNVVDFDDKYIVSASGDR-----TIKVWNTSTCEFVRTLNG-----HKRGIACLQYRDRLVVSGS 313 (435)
T ss_dssp CEEEE--EECCCSSCEEEEEEETTEEEEEETTS-----EEEEEETTTCCEEEEEEC-----CSSCEEEEEEETTEEEEEE
T ss_pred ceeee--EecCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCcCcEEEEEcC-----CCCcEEEEEeCCCEEEEEe
Confidence 21100 00111112223334666667776654 488999988764332211 1112233334566777777
Q ss_pred CCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCC
Q 036185 463 YNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 463 ~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
.++ .+..||+.+..-...- ... ...-.++.+++..++.|+.+ ..+.+||+.+.
T Consensus 314 ~dg-----~i~iwd~~~~~~~~~~--~~h---~~~v~~~~~~~~~l~sg~~d-----g~i~vwd~~~~ 366 (435)
T 1p22_A 314 SDN-----TIRLWDIECGACLRVL--EGH---EELVRCIRFDNKRIVSGAYD-----GKIKVWDLVAA 366 (435)
T ss_dssp TTS-----CEEEEETTTCCEEEEE--CCC---SSCEEEEECCSSEEEEEETT-----SCEEEEEHHHH
T ss_pred CCC-----eEEEEECCCCCEEEEE--eCC---cCcEEEEEecCCEEEEEeCC-----CcEEEEECCCC
Confidence 654 4889999876543321 111 11123333477778888743 36888887543
No 371
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.68 E-value=3.7 Score=44.77 Aligned_cols=196 Identities=8% Similarity=-0.025 Sum_probs=94.0
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
.+++.|+.++ .+.+||..+.++...... ......-.++... ++..++.|+.++ .+.+||..+..
T Consensus 65 ~~l~~~~~dg--------~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~ 129 (372)
T 1k8k_C 65 NRIVTCGTDR--------NAYVWTLKGRTWKPTLVI-LRINRAARCVRWAPNEKKFAVGSGSR------VISICYFEQEN 129 (372)
T ss_dssp TEEEEEETTS--------CEEEEEEETTEEEEEEEC-CCCSSCEEEEEECTTSSEEEEEETTS------SEEEEEEETTT
T ss_pred CEEEEEcCCC--------eEEEEECCCCeeeeeEEe-ecCCCceeEEEECCCCCEEEEEeCCC------EEEEEEecCCC
Confidence 4677777543 578888888876654311 1111111222222 456677777543 46777766543
Q ss_pred -EEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCC----------------cEEEeecCCCCCC
Q 036185 382 -WTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTL----------------QWKELLINGEGPC 443 (1057)
Q Consensus 382 -W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~----------------~W~~~~~~g~~P~ 443 (1057)
|...... ..+....-.+.+.. ++..++.|+.++ .+..||+... .-..+.... ..
T Consensus 130 ~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 201 (372)
T 1k8k_C 130 DWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SS 201 (372)
T ss_dssp TEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CC
T ss_pred cceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcccccccccccccccccccchhhheEecC--CC
Confidence 4333211 01111111222222 556777777655 3788885421 111111110 01
Q ss_pred CcceeEEEE-ECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEE-ECCEEEEEeccCCCCCCCe
Q 036185 444 ARHSHSMLA-YGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFL-YKNYLGLFGGCPVRQNYQE 521 (1057)
Q Consensus 444 ~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~-~~~~l~i~GG~~~~~~~~~ 521 (1057)
...-.+++. -++..++.|+.++ .+..||+.+..-...-.. .... -.+++. -++.+++.| .+ ..
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~---~~~~-v~~~~~~~~~~~l~~~-~d-----~~ 266 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSHDS-----TVCLADADKKMAVATLAS---ETLP-LLAVTFITESSLVAAG-HD-----CF 266 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEETTT-----EEEEEEGGGTTEEEEEEC---SSCC-EEEEEEEETTEEEEEE-TT-----SS
T ss_pred CCeEEEEEECCCCCEEEEEeCCC-----EEEEEECCCCceeEEEcc---CCCC-eEEEEEecCCCEEEEE-eC-----Ce
Confidence 111122222 2455777777543 488999887654332111 1111 122222 366766655 22 24
Q ss_pred EEEEECCC--CeEEEee
Q 036185 522 LSLLDLQL--HIWKHLK 536 (1057)
Q Consensus 522 i~~yd~~~--~~W~~v~ 536 (1057)
+.+||+.+ .+|..+.
T Consensus 267 i~i~~~~~~~~~~~~~~ 283 (372)
T 1k8k_C 267 PVLFTYDSAAGKLSFGG 283 (372)
T ss_dssp CEEEEEETTTTEEEECC
T ss_pred EEEEEccCcCceEEEee
Confidence 66777766 8887764
No 372
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.36 E-value=6 Score=41.53 Aligned_cols=212 Identities=7% Similarity=-0.038 Sum_probs=110.6
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCC-ccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP-RLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~-R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+|+.... .+.+..||+. +++..+.. +.. ..-++++.. ++.+|+.... ...+++||+.
T Consensus 31 g~l~v~~~~--------~~~v~~~~~~-~~~~~~~~---~~~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~- 91 (300)
T 2qc5_A 31 GKVWFTQHK--------ANKISSLDQS-GRIKEFEV---PTPDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK- 91 (300)
T ss_dssp SCEEEEETT--------TTEEEEECTT-SCEEEEEC---SSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-
T ss_pred CCEEEEcCC--------CCeEEEECCC-CceEEEEC---CCCCCcceeEEECCCCCEEEEecC------CCeEEEECCC-
Confidence 368875431 2468899988 77766542 211 122333333 4678886432 2468999988
Q ss_pred CcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEE
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRL 457 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~l 457 (1057)
.++....... ....-++.++. ++.+|+....+ +.++.||+. .+........ ....-+.++. -++++
T Consensus 92 g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~~~~---~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 92 GGFTEYPLPQ---PDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYDLPN---KGSYPAFITLGSDNAL 159 (300)
T ss_dssp SCEEEEECSS---TTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEECSS---TTCCEEEEEECTTSSE
T ss_pred CCeEEecCCC---CCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEccCCC---CCCCceeEEECCCCCE
Confidence 7776554211 11222333333 56788764322 358899988 6666543211 1112233333 24668
Q ss_pred EEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 458 YMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
|+.... .+.+++||+ +..+......... ....+++.- ++.+|+... ....+++||+ +..+....
T Consensus 160 ~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~-----~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 160 WFTENQ-----NNSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEI-----MGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp EEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEET-----TTTEEEEECT-TCCEEEEE
T ss_pred EEEecC-----CCeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEcc-----CCCEEEEEcC-CCcEEEEE
Confidence 876432 245899998 6666654221111 112233332 567777643 2347999998 56666654
Q ss_pred ccCCCCCcccceEEEE-eCCEEEEEeC
Q 036185 537 LNYVCKELFVRSTANV-VDDDLIMIGG 562 (1057)
Q Consensus 537 ~~~~~~~~~~~~~a~~-~~~~iyi~GG 562 (1057)
.+.... .. .+.+. -++.+|+...
T Consensus 225 ~~~~~~--~~-~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 225 IPTPNA--RP-HAITAGKNSEIWFTEW 248 (300)
T ss_dssp CSSTTC--CE-EEEEECSTTCEEEEET
T ss_pred CCCCCC--Cc-eEEEECCCCCEEEecc
Confidence 321111 11 22222 2467888763
No 373
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.31 E-value=2.3 Score=51.98 Aligned_cols=118 Identities=13% Similarity=0.107 Sum_probs=68.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCC---CC---CccccEEEEECCEEEEEcccCCCCCCCCcEEE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGS---PS---PRLGHTSSLIGDHMFIIGGRADPLNILSDVWV 374 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~---P~---~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~ 374 (1057)
.||+... .+.++.+|..+++ |+.-..... +. .....+.++.+++||+... ...++.
T Consensus 79 ~vyv~~~---------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------dg~l~a 142 (677)
T 1kb0_A 79 IMYVSAS---------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------DGRLIA 142 (677)
T ss_dssp EEEEECG---------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------TSEEEE
T ss_pred EEEEECC---------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------CCEEEE
Confidence 4887765 2468999998875 765331110 00 0112345567888888632 246999
Q ss_pred EECCCCc--EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEee
Q 036185 375 FNMAKSK--WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELL 436 (1057)
Q Consensus 375 yd~~t~~--W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~ 436 (1057)
+|..|++ |+.-.............+.++.++.+|+-.+......-..++.||..|++ |+.-.
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 9998875 87643101111112233445668888875433222234679999998876 87654
No 374
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.21 E-value=8.6 Score=42.76 Aligned_cols=219 Identities=12% Similarity=0.071 Sum_probs=110.0
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++.|+.++ .+.+||+.+..-...- . .....-.+++.. ++..++.|+.++ .+.+||+.+.
T Consensus 109 ~~~l~~~~~dg--------~i~iwd~~~~~~~~~~--~-~h~~~v~~~~~~~~~~~l~s~s~d~------~i~iwd~~~~ 171 (420)
T 3vl1_A 109 MRRFILGTTEG--------DIKVLDSNFNLQREID--Q-AHVSEITKLKFFPSGEALISSSQDM------QLKIWSVKDG 171 (420)
T ss_dssp SCEEEEEETTS--------CEEEECTTSCEEEEET--T-SSSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTC
T ss_pred CCEEEEEECCC--------CEEEEeCCCcceeeec--c-cccCccEEEEECCCCCEEEEEeCCC------eEEEEeCCCC
Confidence 35778887543 5788898876654432 1 111111222232 456667777654 6899998765
Q ss_pred cEE-EeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE------
Q 036185 381 KWT-LLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA------ 452 (1057)
Q Consensus 381 ~W~-~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~------ 452 (1057)
+-. .+. + ....-.+.+.. ++..++.|+.++ .+..||+.+.+-...-.....+.. .-.++..
T Consensus 172 ~~~~~~~--~---h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 172 SNPRTLI--G---HRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTIHTFNRKENPHD-GVNSIALFVGTDR 240 (420)
T ss_dssp CCCEEEE--C---CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEEEECBTTBTTC-CEEEEEEEECCCS
T ss_pred cCceEEc--C---CCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCceeEEeecCCCCCC-CccEEEEecCCcc
Confidence 421 111 0 11111222333 556677777665 388899887754332221100111 1111111
Q ss_pred ----------------ECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCE-EEEEeccC
Q 036185 453 ----------------YGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNY-LGLFGGCP 514 (1057)
Q Consensus 453 ----------------~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~-l~i~GG~~ 514 (1057)
-++++++.|+.++ .+..||+.+..-...... .....-.+++.. ++. +++.|+.+
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGHVSG-----VITVHNVFSKEQTIQLPS---KFTCSCNSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEETTS-----CEEEEETTTCCEEEEECC---TTSSCEEEEEECSSCTTEEEEEETT
T ss_pred eeeecccCcccceEEcCCCCEEEEEcCCC-----eEEEEECCCCceeEEccc---ccCCCceeEEEeCCCCCEEEEEeCC
Confidence 2466777777654 388999987654332111 111111222222 344 77777743
Q ss_pred CCCCCCeEEEEECCCCe--EEEeeccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 515 VRQNYQELSLLDLQLHI--WKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 515 ~~~~~~~i~~yd~~~~~--W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
..+.+||+.+.. ...+..... ..-.++...++.+++.||.+.
T Consensus 313 -----g~i~vwd~~~~~~~~~~~~~~~~----~~v~~~~~~~~~~l~s~~~d~ 356 (420)
T 3vl1_A 313 -----GMLAQWDLRSPECPVGEFLINEG----TPINNVYFAAGALFVSSGFDT 356 (420)
T ss_dssp -----SEEEEEETTCTTSCSEEEEESTT----SCEEEEEEETTEEEEEETTTE
T ss_pred -----CeEEEEEcCCCcCchhhhhccCC----CCceEEEeCCCCEEEEecCCc
Confidence 378999998753 223221111 111233445778888887643
No 375
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.19 E-value=3 Score=45.16 Aligned_cols=221 Identities=8% Similarity=-0.005 Sum_probs=105.7
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCcccc-EEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGH-TSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~h-s~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
.+++.|+.++ .+.+||..+.+....- ....... +++.. ++..++.|+.++ .+.+||+.+.
T Consensus 45 ~~l~~~~~dg--------~i~vwd~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~ 106 (369)
T 3zwl_B 45 DLLFSCSKDS--------SASVWYSLNGERLGTL----DGHTGTIWSIDVDCFTKYCVTGSADY------SIKLWDVSNG 106 (369)
T ss_dssp CEEEEEESSS--------CEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSEEEEEETTT------EEEEEETTTC
T ss_pred CEEEEEeCCC--------EEEEEeCCCchhhhhh----hhcCCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCC
Confidence 5777777543 5788888776543321 1111112 22222 456667777643 6999999887
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc----EEEeecCCC----CCCCcceeEEE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ----WKELLINGE----GPCARHSHSML 451 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~----W~~~~~~g~----~P~~r~~~s~~ 451 (1057)
.....-. .+..-.+.+.. ++..++.++.+.......+..||+.+.. +........ ..........+
T Consensus 107 ~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 107 QCVATWK-----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp CEEEEEE-----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred cEEEEee-----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 7544431 11111222222 4556666655422333457777765432 222211000 00000012222
Q ss_pred E--ECCEEEEEecCCCCcccCcEEEEECCC-CeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEEC
Q 036185 452 A--YGSRLYMFGGYNGEKALGDLYTFDVHA-CLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDL 527 (1057)
Q Consensus 452 ~--~~~~lyv~GG~~~~~~~~~l~~yd~~t-~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~ 527 (1057)
. -+++.++.|+.++ .+..||+.+ ..-..... . . ...-.+++.. ++..++.|+.+ ..+.+||+
T Consensus 182 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~-~--~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~ 247 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSID-L--H-EKSISDMQFSPDLTYFITSSRD-----TNSFLVDV 247 (369)
T ss_dssp EECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEE-C--C-SSCEEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred EEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEe-c--C-CCceeEEEECCCCCEEEEecCC-----ceEEEEEC
Confidence 2 2455667776553 588999987 34332211 1 1 1111222222 56666777632 37999999
Q ss_pred CCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCC
Q 036185 528 QLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 528 ~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
.+......-... ......+...++..+++|+..
T Consensus 248 ~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 248 STLQVLKKYETD----CPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp TTCCEEEEEECS----SCEEEEEECSSSSEEEEEECC
T ss_pred CCCceeeeecCC----CCceeEEecCCCceEEEeecC
Confidence 887654432211 111222223355666666643
No 376
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.17 E-value=0.27 Score=54.58 Aligned_cols=148 Identities=10% Similarity=0.017 Sum_probs=70.3
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
.+++.|+.++ .+.+||+.++.|..+.. +......-.++.+ ++..++.|+.++ .+.+||+.+.
T Consensus 24 ~~l~~~~~d~--------~i~iw~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~ 87 (377)
T 3dwl_C 24 TEFVTTTATN--------QVELYEQDGNGWKHART--FSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPD 87 (377)
T ss_dssp SEEECCCSSS--------CBCEEEEETTEEEECCC--BCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC-----
T ss_pred CEEEEecCCC--------EEEEEEccCCceEEEEE--EecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCC
Confidence 4777777543 46778888887776552 2222222222232 456777777654 5888998877
Q ss_pred c-EEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCc-EEEeecCCCCCCCcceeEEEEE-CC
Q 036185 381 K-WTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQ-WKELLINGEGPCARHSHSMLAY-GS 455 (1057)
Q Consensus 381 ~-W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~-W~~~~~~g~~P~~r~~~s~~~~-~~ 455 (1057)
. |...... ......-.++.+ +++.++.|+.++. +.+||+.+.+ |........ +....-.+++.. ++
T Consensus 88 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~ 158 (377)
T 3dwl_C 88 GTWKQTLVL---LRLNRAATFVRWSPNEDKFAVGSGARV-----ISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNN 158 (377)
T ss_dssp -CCCCEEEC---CCCSSCEEEEECCTTSSCCEEEESSSC-----EEECCC-----CCCCEEECS-SCCSCEEEEEECTTS
T ss_pred CceeeeeEe---cccCCceEEEEECCCCCEEEEEecCCe-----EEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCC
Confidence 6 5443311 111111222222 4567777776553 7777877654 322221110 111122223332 45
Q ss_pred EEEEEecCCCCcccCcEEEEECCCC
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHAC 480 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~ 480 (1057)
++++.|+.++ .+..||+.+.
T Consensus 159 ~~l~~~~~d~-----~i~iwd~~~~ 178 (377)
T 3dwl_C 159 VLLAAGCADR-----KAYVLSAYVR 178 (377)
T ss_dssp SEEEEEESSS-----CEEEEEECCS
T ss_pred CEEEEEeCCC-----EEEEEEEEec
Confidence 6777887654 4778887543
No 377
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.05 E-value=3.1 Score=51.79 Aligned_cols=209 Identities=9% Similarity=0.046 Sum_probs=109.6
Q ss_pred cEEEEeCCCCcEEEeccCC-CC----CCccccEEEEE-CCE-EEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCC
Q 036185 321 DLFLLDPLQGTIKAIHTEG-SP----SPRLGHTSSLI-GDH-MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQ 393 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~-~P----~~R~~hs~v~~-~~~-Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~ 393 (1057)
-+.+||+.++++..+.... .+ ....-++++.. ++. |++ |... ..+++||+.++++.......+...
T Consensus 378 Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~------~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 378 GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHA------GGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETT------TEEEEEETTTCCEEEECTTTSCCS
T ss_pred CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCc------CceeEEeCCCCcEEEeecCCCCcC
Confidence 4788999999888775321 11 11222333333 456 665 3332 358999999999888753211111
Q ss_pred cccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCC---CCCCCcceeEEEE-ECCEEEEEecCCCCcc
Q 036185 394 PRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING---EGPCARHSHSMLA-YGSRLYMFGGYNGEKA 468 (1057)
Q Consensus 394 ~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g---~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~ 468 (1057)
...-.+.+.. ++.||+-.. +.+++||+.+.+|+...... .++.... .++.. .++.||+-..
T Consensus 451 ~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt~------ 516 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQI-TTLFRDSHKRLWIGGE------ 516 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCE-EEEEECTTCCEEEEES------
T ss_pred CCeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceE-EEEEECCCCCEEEEeC------
Confidence 1111222222 456776432 23899999999998875421 1111111 12222 2456777532
Q ss_pred cCcEEEEECCCCeEEEeecc---CCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCc
Q 036185 469 LGDLYTFDVHACLWKKEDIA---ARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKEL 544 (1057)
Q Consensus 469 ~~~l~~yd~~t~~W~~v~~~---~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~ 544 (1057)
+.+++||+.+..+ ..... ..++.. .-.+++.- ++.|++-.. ..+++||+.+.+++........+..
T Consensus 517 -~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~ 586 (795)
T 4a2l_A 517 -EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNN 586 (795)
T ss_dssp -SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCS
T ss_pred -CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchh
Confidence 2399999999988 44211 111111 11222221 466766321 2589999999999887532211111
Q ss_pred ccceEEEEe--CCEEEEEeC
Q 036185 545 FVRSTANVV--DDDLIMIGG 562 (1057)
Q Consensus 545 ~~~~~a~~~--~~~iyi~GG 562 (1057)
. ..+... ++.+|+.+.
T Consensus 587 ~--i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 587 V--VYGILEDSFGRLWLSTN 604 (795)
T ss_dssp C--EEEEEECTTSCEEEEET
T ss_pred h--eEEEEECCCCCEEEEcC
Confidence 1 122222 467887664
No 378
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.00 E-value=2 Score=46.95 Aligned_cols=192 Identities=15% Similarity=0.115 Sum_probs=91.8
Q ss_pred ccEEEEeCCCCcEEEeccC-CCCCCccccEEEE-ECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccc
Q 036185 320 NDLFLLDPLQGTIKAIHTE-GSPSPRLGHTSSL-IGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHR 397 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~-~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~ 397 (1057)
-.+|.+|..++++..+... ....| ..++. -++++|+.+.... ...+++||+.+.+++.+... ......-
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p---~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~--~~~~~~p 88 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNP---TYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTV--VAPGTPP 88 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCC---CCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEE--EEESCCC
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCc---ceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeee--ecCCCCC
Confidence 4578888888888765422 11111 12222 2567777654211 24799999988887766521 0011111
Q ss_pred eEEEEE-CC-EEEEEcccCCCcccceEEEEECC-CCcEEEeec---CCCCCCCc----ceeEEEE-ECCEEEEEecCCCC
Q 036185 398 HAAAVI-GS-KIYVFGGLNNDTIFSSLHVLDTD-TLQWKELLI---NGEGPCAR----HSHSMLA-YGSRLYMFGGYNGE 466 (1057)
Q Consensus 398 hsa~~~-~~-~iyv~GG~~~~~~~~~v~~yD~~-t~~W~~~~~---~g~~P~~r----~~~s~~~-~~~~lyv~GG~~~~ 466 (1057)
...++. ++ .+|+.+..+ +.+.+||+. +.....+.. .+.-|.+| .-++++. -++++|+.+..+
T Consensus 89 ~~~a~spdg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-- 161 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-- 161 (347)
T ss_dssp SEEEEETTTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT--
T ss_pred EEEEECCCCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC--
Confidence 223333 44 466654322 347788874 344443322 22222211 1222333 245677654332
Q ss_pred cccCcEEEEECC-CCeEEEeeccCCCCCCceeeEEEEE-CC-EEEEEeccCCCCCCCeEEEEECC--CCeEEEee
Q 036185 467 KALGDLYTFDVH-ACLWKKEDIAARSPHARFSHTMFLY-KN-YLGLFGGCPVRQNYQELSLLDLQ--LHIWKHLK 536 (1057)
Q Consensus 467 ~~~~~l~~yd~~-t~~W~~v~~~~~~P~~R~~hs~~~~-~~-~l~i~GG~~~~~~~~~i~~yd~~--~~~W~~v~ 536 (1057)
+.+++||+. +.....+.... .+....-..++.. ++ .+|+.+.. .+.+.+|++. +.++..+.
T Consensus 162 ---~~v~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~-----~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 162 ---DKVYVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGEL-----SSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp ---TEEEEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEEEETTTTEEEEEE
T ss_pred ---CEEEEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCC-----CCEEEEEEecCCCCceEEee
Confidence 368889988 56555432111 1111111122222 44 47776542 2355555544 57776554
No 379
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.99 E-value=4.4 Score=44.04 Aligned_cols=186 Identities=13% Similarity=0.092 Sum_probs=97.3
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
.+++.|+.++ .+.++|+.+++....-. ..+.. -.+++.. ++..++.|+.++ .+.+||..+..
T Consensus 93 ~~l~s~s~D~--------~i~lWd~~~~~~~~~~~-~~~~~--~~~~~~spdg~~l~~g~~dg------~v~i~~~~~~~ 155 (321)
T 3ow8_A 93 PIAASSSLDA--------HIRLWDLENGKQIKSID-AGPVD--AWTLAFSPDSQYLATGTHVG------KVNIFGVESGK 155 (321)
T ss_dssp SEEEEEETTS--------EEEEEETTTTEEEEEEE-CCTTC--CCCEEECTTSSEEEEECTTS------EEEEEETTTCS
T ss_pred CEEEEEeCCC--------cEEEEECCCCCEEEEEe-CCCcc--EEEEEECCCCCEEEEEcCCC------cEEEEEcCCCc
Confidence 4667776544 57788888765432210 11111 1122222 456667776543 68889987765
Q ss_pred EEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLYM 459 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv 459 (1057)
-...-. .....-.+.+.. +++.++.|+.++ .+.+||+.+.+-...-. + ...+ -.+++. -++++++
T Consensus 156 ~~~~~~----~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~-~-h~~~--v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 156 KEYSLD----TRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLE-G-HAMP--IRSLTFSPDSQLLV 222 (321)
T ss_dssp EEEEEE----CSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC-C-CSSC--CCEEEECTTSCEEE
T ss_pred eeEEec----CCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEc-c-cCCc--eeEEEEcCCCCEEE
Confidence 432210 011111222222 566777787765 38899998876433211 1 0111 112222 2566777
Q ss_pred EecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 460 FGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 460 ~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
.|+.++ .+..||+.+......-. + ....-.++.+ ++..++.|+.+ ..+.++|+.+.+-.
T Consensus 223 s~s~dg-----~i~iwd~~~~~~~~~~~-~----h~~~v~~~~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 223 TASDDG-----YIKIYDVQHANLAGTLS-G----HASWVLNVAFCPDDTHFVSSSSD-----KSVKVWDVGTRTCV 283 (321)
T ss_dssp EECTTS-----CEEEEETTTCCEEEEEC-C----CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEE
T ss_pred EEcCCC-----eEEEEECCCcceeEEEc-C----CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCEEE
Confidence 887654 38889988766543211 1 1111122233 56677777743 36888999877543
No 380
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=93.98 E-value=7.2 Score=41.01 Aligned_cols=221 Identities=7% Similarity=0.030 Sum_probs=113.0
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCC-CCC-ccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGS-PSP-RLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~-P~~-R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
+.+|+.+.. ...+.+||+.......+..... +.. ..-+.++.. ++++|+.+... ...+.+||.
T Consensus 41 g~l~v~~~~--------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-----~~~i~~~d~ 107 (286)
T 1q7f_A 41 NDIIVADTN--------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-----THQIQIYNQ 107 (286)
T ss_dssp CCEEEEEGG--------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-----GCEEEEECT
T ss_pred CCEEEEECC--------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-----CCEEEEECC
Confidence 358877543 2468899988655444432111 111 122344442 57899886421 246899996
Q ss_pred CCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC
Q 036185 378 AKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GS 455 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~ 455 (1057)
.......+.. +....-+..++. ++++|+....+ +.+++||+.......+...+... .-.+++.. ++
T Consensus 108 ~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~---~p~~i~~~~~g 175 (286)
T 1q7f_A 108 YGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLE---FPNGVVVNDKQ 175 (286)
T ss_dssp TSCEEEEECT----TTCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCS---SEEEEEECSSS
T ss_pred CCcEEEEecC----ccCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccC---CcEEEEECCCC
Confidence 5444333321 111111233332 56788875432 45889998765555543321111 12233332 47
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
.+|+.... .+.+.+||+.......+...+....+ .+++.- ++.+|+....+ ...+.+||+....-..
T Consensus 176 ~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~~p---~~i~~d~~G~l~v~~~~~----~~~i~~~~~~g~~~~~ 243 (286)
T 1q7f_A 176 EIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITNYP---IGVGINSNGEILIADNHN----NFNLTIFTQDGQLISA 243 (286)
T ss_dssp EEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSCSE---EEEEECTTCCEEEEECSS----SCEEEEECTTSCEEEE
T ss_pred CEEEEECC-----CCEEEEEcCCCCEEEEEccCCccCCC---cEEEECCCCCEEEEeCCC----CEEEEEECCCCCEEEE
Confidence 88887543 34699999876655554222211111 233332 56788876421 1279999987665555
Q ss_pred eeccCCCCCcccceEEEEeCCEEEEEe
Q 036185 535 LKLNYVCKELFVRSTANVVDDDLIMIG 561 (1057)
Q Consensus 535 v~~~~~~~~~~~~~~a~~~~~~iyi~G 561 (1057)
+...... ......+..-++++|+..
T Consensus 244 ~~~~~~~--~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 244 LESKVKH--AQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEESSCC--SCEEEEEEETTTEEEEEE
T ss_pred EcccCCC--CcceeEEECCCCcEEEEC
Confidence 5432111 111222333467888875
No 381
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=93.88 E-value=3.2 Score=45.17 Aligned_cols=149 Identities=10% Similarity=0.035 Sum_probs=79.8
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
++.+++.|+.++ .+.++|+.+.+-...-..+ +. ...+.+.. +++.++.|+.++ .+.+||..+..
T Consensus 91 ~~~~l~s~s~D~------~i~lWd~~~~~~~~~~~~~--~~--~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~ 155 (321)
T 3ow8_A 91 TLPIAASSSLDA------HIRLWDLENGKQIKSIDAG--PV--DAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGK 155 (321)
T ss_dssp SSSEEEEEETTS------EEEEEETTTTEEEEEEECC--TT--CCCCEEECTTSSEEEEECTTS-----EEEEEETTTCS
T ss_pred CCCEEEEEeCCC------cEEEEECCCCCEEEEEeCC--Cc--cEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCc
Confidence 345667777654 6889999887643322111 11 11122222 556777776554 47888887765
Q ss_pred EEEeecCCCCCCCcceeEEEE-ECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEE
Q 036185 432 WKELLINGEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGL 509 (1057)
Q Consensus 432 W~~~~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i 509 (1057)
-...-.. ....-.+++. -+++.++.|+.++ .+..||+.+.+-...-.....+ -.+++.. ++.+++
T Consensus 156 ~~~~~~~----~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~~~h~~~----v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 156 KEYSLDT----RGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTLEGHAMP----IRSLTFSPDSQLLV 222 (321)
T ss_dssp EEEEEEC----SSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECCCSSC----CCEEEECTTSCEEE
T ss_pred eeEEecC----CCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEEcccCCc----eeEEEEcCCCCEEE
Confidence 4332211 1111222222 2566777887664 4889999887644321111111 1122222 567777
Q ss_pred EeccCCCCCCCeEEEEECCCCeEEE
Q 036185 510 FGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 510 ~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
.|+.+ ..+.+||+.+.....
T Consensus 223 s~s~d-----g~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 223 TASDD-----GYIKIYDVQHANLAG 242 (321)
T ss_dssp EECTT-----SCEEEEETTTCCEEE
T ss_pred EEcCC-----CeEEEEECCCcceeE
Confidence 87743 358899998766543
No 382
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.82 E-value=2.6 Score=45.93 Aligned_cols=206 Identities=11% Similarity=0.107 Sum_probs=97.2
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-C-CEEEEEcccCCCCCCCCcEEEEECC-C
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-G-DHMFIIGGRADPLNILSDVWVFNMA-K 379 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~~~~v~~yd~~-t 379 (1057)
++|+.+..+. ...+++||+.++++..+........ .-..++.. + ..+|+.+..+ +.+.+||+. +
T Consensus 52 ~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~~~~~~~-~p~~~a~spdg~~l~~~~~~~------~~v~v~~~~~~ 118 (347)
T 3hfq_A 52 CLYSVDKEDD------EGGIAAWQIDGQTAHKLNTVVAPGT-PPAYVAVDEARQLVYSANYHK------GTAEVMKIAAD 118 (347)
T ss_dssp EEEEEEEETT------EEEEEEEEEETTEEEEEEEEEEESC-CCSEEEEETTTTEEEEEETTT------TEEEEEEECTT
T ss_pred eEEEEEecCC------CceEEEEEecCCcEEEeeeeecCCC-CCEEEEECCCCCEEEEEeCCC------CEEEEEEeCCC
Confidence 5776654221 3578999998888776652111111 11223333 3 3576664322 367888874 3
Q ss_pred CcEEEee---ccCCCCCccc----ceEEEEE-CCEEEEEcccCCCcccceEEEEECC-CCcEEEeecCCCCCCCcceeEE
Q 036185 380 SKWTLLE---CSGSVFQPRH----RHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTD-TLQWKELLINGEGPCARHSHSM 450 (1057)
Q Consensus 380 ~~W~~~~---~~g~~p~~R~----~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~-t~~W~~~~~~g~~P~~r~~~s~ 450 (1057)
.+...+. ..+..|.+|. -++.++. ++++|+.+..+ +.+++||+. +.+...+......+.....+.+
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 3443332 2222222221 2223332 55677654332 368889987 5666554321111111112222
Q ss_pred EEECCE-EEEEecCCCCcccCcEEEEE--CCCCeEEEeeccCCCCCC---ceeeEEEEE--CC-EEEEEeccCCCCCCCe
Q 036185 451 LAYGSR-LYMFGGYNGEKALGDLYTFD--VHACLWKKEDIAARSPHA---RFSHTMFLY--KN-YLGLFGGCPVRQNYQE 521 (1057)
Q Consensus 451 ~~~~~~-lyv~GG~~~~~~~~~l~~yd--~~t~~W~~v~~~~~~P~~---R~~hs~~~~--~~-~l~i~GG~~~~~~~~~ 521 (1057)
..-+++ +|+.+..+ +.+.+|+ ..+..+..+......|.. ......+.+ ++ .||+.+. ..+.
T Consensus 194 ~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-----~~~~ 263 (347)
T 3hfq_A 194 FSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-----GYNT 263 (347)
T ss_dssp ECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-----TTTE
T ss_pred ECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-----CCCE
Confidence 222444 77765433 2344554 446777654332222221 112222333 44 5766654 2347
Q ss_pred EEEEECCC-CeEEEee
Q 036185 522 LSLLDLQL-HIWKHLK 536 (1057)
Q Consensus 522 i~~yd~~~-~~W~~v~ 536 (1057)
+.+|++.. .+++.+.
T Consensus 264 v~v~~~~~~g~~~~~~ 279 (347)
T 3hfq_A 264 LAVFAVTADGHLTLIQ 279 (347)
T ss_dssp EEEEEECGGGCEEEEE
T ss_pred EEEEEECCCCcEEEeE
Confidence 88888863 3555554
No 383
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.80 E-value=2.8 Score=47.67 Aligned_cols=209 Identities=10% Similarity=0.005 Sum_probs=108.6
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
..++++|........+... . ..-.+.+.. +++.+++++.+. ....++++|+.+++...+.. .+ ....
T Consensus 159 ~~i~i~d~~g~~~~~l~~~--~--~~v~~~~~Spdg~~la~~s~~~---~~~~i~~~d~~tg~~~~l~~---~~--~~~~ 226 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS--P--QPLMSPAWSPDGSKLAYVTFES---GRSALVIQTLANGAVRQVAS---FP--RHNG 226 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE--S--SCEEEEEECTTSSEEEEEECTT---SSCEEEEEETTTCCEEEEEC---CS--SCEE
T ss_pred ceEEEEcCCCCCCEEEeCC--C--CcceeeEEcCCCCEEEEEEecC---CCcEEEEEECCCCcEEEeec---CC--Cccc
Confidence 6788889876655544311 1 111122222 455556665543 13589999999988776641 11 1122
Q ss_pred EEEEE-CCE-EEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEEEEecCCCCcccCcEEEE
Q 036185 399 AAAVI-GSK-IYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGDLYTF 475 (1057)
Q Consensus 399 sa~~~-~~~-iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l~~y 475 (1057)
+.+.. +++ |++.+..++ ...++.+|+.+.+...+... + ....+... -+++.+++++..+ ....+|.+
T Consensus 227 ~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~~~---~--~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~ 296 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVTDG---R--SNNTEPTWFPDSQNLAFTSDQA--GRPQVYKV 296 (415)
T ss_dssp EEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECCCC---S--SCEEEEEECTTSSEEEEEECTT--SSCEEEEE
T ss_pred CEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCcCC---C--CcccceEECCCCCEEEEEECCC--CCcEEEEE
Confidence 22222 444 554444332 24699999999887666432 1 11122222 2455455544322 13469999
Q ss_pred ECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEe
Q 036185 476 DVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVV 553 (1057)
Q Consensus 476 d~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~ 553 (1057)
|+.+.....+.. .... .....+ +++.+++++... ....++++|+.+.+...+.... .....+..-
T Consensus 297 d~~~~~~~~l~~-----~~~~-~~~~~~spdG~~l~~~~~~~--g~~~i~~~d~~~~~~~~l~~~~-----~~~~~~~sp 363 (415)
T 2hqs_A 297 NINGGAPQRITW-----EGSQ-NQDADVSSDGKFMVMVSSNG--GQQHIAKQDLATGGVQVLSSTF-----LDETPSLAP 363 (415)
T ss_dssp ETTSSCCEECCC-----SSSE-EEEEEECTTSSEEEEEEECS--SCEEEEEEETTTCCEEECCCSS-----SCEEEEECT
T ss_pred ECCCCCEEEEec-----CCCc-ccCeEECCCCCEEEEEECcC--CceEEEEEECCCCCEEEecCCC-----CcCCeEEcC
Confidence 998876554311 1111 122233 555555555321 1347999999999887654321 112222223
Q ss_pred CCEEEEEeCC
Q 036185 554 DDDLIMIGGG 563 (1057)
Q Consensus 554 ~~~iyi~GGg 563 (1057)
+++.+++++.
T Consensus 364 dg~~l~~~s~ 373 (415)
T 2hqs_A 364 NGTMVIYSSS 373 (415)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEc
Confidence 5666666653
No 384
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.79 E-value=1.4 Score=45.93 Aligned_cols=190 Identities=12% Similarity=0.049 Sum_probs=98.0
Q ss_pred cEEEEeCCC-CcEEEeccCCCCCCccccEEEE-ECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 321 DLFLLDPLQ-GTIKAIHTEGSPSPRLGHTSSL-IGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 321 d~~~yd~~t-~~W~~l~~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
.++++|+.+ .+...+.. .+....-.+++. -+++.+++++... .....+|.++..+.....+... .+ ..
T Consensus 63 ~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~----~~--~~ 132 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDT--GFATICNNDHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKN----LP--SY 132 (297)
T ss_dssp EEEEEESSSCCSCEECCC--TTCCCBCSCCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSS----SS--EE
T ss_pred eEEEEeCCCCCCceEecc--ccccccccceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecC----CC--cc
Confidence 689999998 77766541 121111122222 2455555555322 2346899999888775555311 11 22
Q ss_pred EEEEE-CC-EEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEec-CCCCcccCcEEEE
Q 036185 399 AAAVI-GS-KIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGG-YNGEKALGDLYTF 475 (1057)
Q Consensus 399 sa~~~-~~-~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG-~~~~~~~~~l~~y 475 (1057)
..+.. ++ .+++.++.++. ..+|.+|..+.....+... + .........-+++.+++++ .++ ...+|.+
T Consensus 133 ~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~s~dg~~l~~~~~~~~---~~~i~~~ 202 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLTHG---E-GRNDGPDYSPDGRWIYFNSSRTG---QMQIWRV 202 (297)
T ss_dssp EEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECCCS---S-SCEEEEEECTTSSEEEEEECTTS---SCEEEEE
T ss_pred ceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcccC---C-CccccceECCCCCEEEEEecCCC---CccEEEE
Confidence 22222 34 45545544332 3678888888877665432 1 1111112222444444443 333 3568888
Q ss_pred ECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCC------CCCeEEEEECCCCeEEEee
Q 036185 476 DVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQ------NYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 476 d~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~------~~~~i~~yd~~~~~W~~v~ 536 (1057)
++.+.....+.. . . .......+ ++..+++++..... ....++++|+.+.+...+.
T Consensus 203 ~~~~~~~~~~~~---~--~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 203 RVDGSSVERITD---S--A-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp ETTSSCEEECCC---C--S-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCCCCCcEEEec---C--C-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 887777665521 1 1 12222333 45555555533221 2246999999988776654
No 385
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.65 E-value=1.2 Score=55.29 Aligned_cols=179 Identities=8% Similarity=0.092 Sum_probs=103.6
Q ss_pred ccEEEEeCCCCcEEEeccCC-CCC-CccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCccc
Q 036185 320 NDLFLLDPLQGTIKAIHTEG-SPS-PRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRH 396 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~-~P~-~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~ 396 (1057)
+-+++||+.+++|..+.... .+. ...-.+++.. ++.|++. ... .-+++||+.+++|........++...
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~- 540 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG------GGVGIYTPDMQLVRKFNQYEGFCSNT- 540 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS------SCEEEECTTCCEEEEECTTTTCSCSC-
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcC------CCEEEEeCCCCeEEEccCCCCCCCCe-
Confidence 35889999998887765321 011 1111222222 4567764 321 24899999999998876422232211
Q ss_pred ceEEEEE--CCEEEEEcccCCCcccceE-EEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcE
Q 036185 397 RHAAAVI--GSKIYVFGGLNNDTIFSSL-HVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDL 472 (1057)
Q Consensus 397 ~hsa~~~--~~~iyv~GG~~~~~~~~~v-~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l 472 (1057)
-.+... ++.||+-.. +-+ ++||+.+.++........+|.... .+++.. ++.||+.+. +.+
T Consensus 541 -i~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl 604 (781)
T 3v9f_A 541 -INQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGI 604 (781)
T ss_dssp -EEEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCE
T ss_pred -eEEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------Cce
Confidence 112222 456777432 236 899999999888765444554433 333332 567877642 348
Q ss_pred EEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 473 YTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 473 ~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
.+||+.+.++........++...+...++.. ++.| .|||. +.+..|||+.
T Consensus 605 ~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l-~~g~~------~Gl~~f~p~~ 656 (781)
T 3v9f_A 605 SCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLI-YFGSI------NGLCFFNPDI 656 (781)
T ss_dssp EEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCE-EEEET------TEEEEECSCC
T ss_pred EEEECCCCceEEecccCCccccccccCceEECCCCEE-EEECC------CceEEEChhh
Confidence 9999999999887554445555443333333 4454 55663 3577888764
No 386
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.58 E-value=12 Score=42.32 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=108.8
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEE-ECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSL-IGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
+++.|+.++ .+.++|+.+++....-. ....+....+... -++..++.|+.++ .+.+||..+..-
T Consensus 175 ~l~s~s~dg--------~i~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~------~i~vwd~~~~~~ 239 (464)
T 3v7d_B 175 ILVSGSTDR--------TVRVWDIKKGCCTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDN------TLHVWKLPKESS 239 (464)
T ss_dssp EEEEEETTS--------CEEEEETTTTEEEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTS------CEEEEECCCCCC
T ss_pred EEEEEeCCC--------CEEEEECCCCcEEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCC------cEEEeeCCCCcc
Confidence 777777554 57888888776433221 1111111111111 1447777777654 578888876542
Q ss_pred EEeeccC------------------CCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCC
Q 036185 383 TLLECSG------------------SVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCA 444 (1057)
Q Consensus 383 ~~~~~~g------------------~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~ 444 (1057)
....... ..........+...++..++.|+.++ .+..||+.+.+-...-. + . .
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~-~--~-~ 310 (464)
T 3v7d_B 240 VPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN-----TLIVWDVAQMKCLYILS-G--H-T 310 (464)
T ss_dssp C------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC-C--C-S
T ss_pred cccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEec-C--C-C
Confidence 1110000 00000111112223455667777655 48899998765433221 1 1 1
Q ss_pred cceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEE
Q 036185 445 RHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELS 523 (1057)
Q Consensus 445 r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~ 523 (1057)
..-.+++.. ++..++.|+.++ .+..||+.+..-...- . .....-.++.+.+..++.|+.+ ..+.
T Consensus 311 ~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~--~---~h~~~v~~~~~~~~~l~s~s~d-----g~v~ 375 (464)
T 3v7d_B 311 DRIYSTIYDHERKRCISASMDT-----TIRIWDLENGELMYTL--Q---GHTALVGLLRLSDKFLVSAAAD-----GSIR 375 (464)
T ss_dssp SCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEEEE--C---CCSSCEEEEEECSSEEEEEETT-----SEEE
T ss_pred CCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCcEEEEE--e---CCCCcEEEEEEcCCEEEEEeCC-----CcEE
Confidence 112223333 456777777654 4889999887644321 1 1111223444556677777743 3688
Q ss_pred EEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeC
Q 036185 524 LLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGG 562 (1057)
Q Consensus 524 ~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GG 562 (1057)
+||+.+..-...... .......+...++.+++.|+
T Consensus 376 vwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 376 GWDANDYSRKFSYHH----TNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEETTTCCEEEEEEC----TTCCCEEEEEECSSEEEEEE
T ss_pred EEECCCCceeeeecC----CCCccEEEEEeCCCEEEEec
Confidence 999988653332211 11223344555677777765
No 387
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.56 E-value=4.1 Score=44.49 Aligned_cols=186 Identities=13% Similarity=0.149 Sum_probs=93.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+++.||.++ .+.++|..+..-...- +.......++.+ ++..++.||.++ .+.+||+.+
T Consensus 67 ~~~l~s~s~Dg--------~v~iWd~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~d~------~v~iw~~~~ 128 (340)
T 1got_B 67 SRLLLSASQDG--------KLIIWDSYTTNKVHAI----PLRSSWVMTCAYAPSGNYVACGGLDN------ICSIYNLKT 128 (340)
T ss_dssp SSEEEEEETTT--------EEEEEETTTCCEEEEE----ECSSSCEEEEEECTTSSEEEEEETTC------EEEEEETTT
T ss_pred CCEEEEEeCCC--------cEEEEECCCCCcceEe----ecCCccEEEEEECCCCCEEEEEeCCC------eEEEEECcc
Confidence 35777777554 5777887766533221 111111122222 456777777654 688888876
Q ss_pred Cc--EEEee-ccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-C
Q 036185 380 SK--WTLLE-CSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-G 454 (1057)
Q Consensus 380 ~~--W~~~~-~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~ 454 (1057)
.. ..... ..+. ...-.++... ++. ++.|+.++ .+..||+.+.+....-. + . ...-.++... +
T Consensus 129 ~~~~~~~~~~~~~h---~~~v~~~~~~~~~~-l~s~s~d~-----~i~~wd~~~~~~~~~~~-~--h-~~~v~~~~~~~~ 195 (340)
T 1got_B 129 REGNVRVSRELAGH---TGYLSCCRFLDDNQ-IVTSSGDT-----TCALWDIETGQQTTTFT-G--H-TGDVMSLSLAPD 195 (340)
T ss_dssp CSBSCEEEEEEECC---SSCEEEEEEEETTE-EEEEETTS-----CEEEEETTTTEEEEEEC-C--C-SSCEEEEEECTT
T ss_pred CCCcceeEEEecCC---CccEEEEEECCCCc-EEEEECCC-----cEEEEECCCCcEEEEEc-C--C-CCceEEEEECCC
Confidence 43 11111 0010 0111122222 455 55565544 48889998876443221 1 1 1111222222 4
Q ss_pred CEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 455 SRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 455 ~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
+.+++.|+.++ .+..||+.+..-...-. + . ...-.+++.. ++..++.|+.+ ..+.+||+.+..-
T Consensus 196 ~~~l~sg~~d~-----~v~~wd~~~~~~~~~~~-~-h--~~~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~ 260 (340)
T 1got_B 196 TRLFVSGACDA-----SAKLWDVREGMCRQTFT-G-H--ESDINAICFFPNGNAFATGSDD-----ATCRLFDLRADQE 260 (340)
T ss_dssp SSEEEEEETTS-----CEEEEETTTCSEEEEEC-C-C--SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CCEEEEEeCCC-----cEEEEECCCCeeEEEEc-C-C--cCCEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcE
Confidence 56788888765 48889988765433211 1 1 1111122222 56677777743 3688899887654
No 388
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.46 E-value=9.5 Score=40.72 Aligned_cols=229 Identities=10% Similarity=0.031 Sum_probs=114.3
Q ss_pred cceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCC
Q 036185 288 WGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPL 366 (1057)
Q Consensus 288 ~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~ 366 (1057)
++-+.+.... ++.+|+..-. .+.+++||+.++....+.. +. + -.+++.. ++++|+..
T Consensus 14 ~~Egp~w~~~---~~~l~~~d~~--------~~~i~~~d~~~~~~~~~~~---~~-~-~~~i~~~~dG~l~v~~------ 71 (297)
T 3g4e_A 14 CGESPVWEEV---SNSLLFVDIP--------AKKVCRWDSFTKQVQRVTM---DA-P-VSSVALRQSGGYVATI------ 71 (297)
T ss_dssp BEEEEEEETT---TTEEEEEETT--------TTEEEEEETTTCCEEEEEC---SS-C-EEEEEEBTTSSEEEEE------
T ss_pred cccCCeEECC---CCEEEEEECC--------CCEEEEEECCCCcEEEEeC---CC-c-eEEEEECCCCCEEEEE------
Confidence 3444444432 2468887653 2468999999887655542 21 1 1223333 45666542
Q ss_pred CCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCC------CcccceEEEEECCCCcEEEeecC
Q 036185 367 NILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNN------DTIFSSLHVLDTDTLQWKELLIN 438 (1057)
Q Consensus 367 ~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~------~~~~~~v~~yD~~t~~W~~~~~~ 438 (1057)
.+.+++||+.+.+++.+...... .+........+ ++++|+-.-... ......++++|+. .+...+...
T Consensus 72 --~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~ 147 (297)
T 3g4e_A 72 --GTKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQ 147 (297)
T ss_dssp --TTEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEE
T ss_pred --CCeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeec
Confidence 14699999999998877532111 11222222223 567776321111 1233568899875 344443221
Q ss_pred CCCCCCcceeEEEEE--CCEEEEEecCCCCcccCcEEEEEC--CCCeEEEeeccCCCCC-CceeeEEEEE-CCEEEEEec
Q 036185 439 GEGPCARHSHSMLAY--GSRLYMFGGYNGEKALGDLYTFDV--HACLWKKEDIAARSPH-ARFSHTMFLY-KNYLGLFGG 512 (1057)
Q Consensus 439 g~~P~~r~~~s~~~~--~~~lyv~GG~~~~~~~~~l~~yd~--~t~~W~~v~~~~~~P~-~R~~hs~~~~-~~~l~i~GG 512 (1057)
.. ....++.. ++.+|+.... .+.|++||. .+............+. ...-.+++.- ++.||+...
T Consensus 148 --~~---~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~ 217 (297)
T 3g4e_A 148 --VD---ISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY 217 (297)
T ss_dssp --ES---BEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred --cc---cccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc
Confidence 11 11233332 3458877543 346888886 4554432111111111 1112233333 567877642
Q ss_pred cCCCCCCCeEEEEECCCCeEE-EeeccCCCCCcccceEEEEeC----CEEEEEeCC
Q 036185 513 CPVRQNYQELSLLDLQLHIWK-HLKLNYVCKELFVRSTANVVD----DDLIMIGGG 563 (1057)
Q Consensus 513 ~~~~~~~~~i~~yd~~~~~W~-~v~~~~~~~~~~~~~~a~~~~----~~iyi~GGg 563 (1057)
. ...+++||+++.+.. .+..+ . ...+++..+ +.+||....
T Consensus 218 ~-----~~~v~~~d~~tG~~~~~i~~p-~-----~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 218 N-----GGRVIRLDPVTGKRLQTVKLP-V-----DKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp T-----TTEEEEECTTTCCEEEEEECS-S-----SBEEEEEEESGGGCEEEEEEBC
T ss_pred C-----CCEEEEEcCCCceEEEEEECC-C-----CCceEEEEeCCCCCEEEEEcCC
Confidence 1 236999999876544 33321 1 112333332 478887764
No 389
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.42 E-value=4.8 Score=43.18 Aligned_cols=190 Identities=8% Similarity=-0.010 Sum_probs=87.7
Q ss_pred cEEEEeCC--CCcEEEeccCCCCCCccccEEEEE-C-CEEEEEcccCCCCCCCCcEEEEECCCC-cEEEeeccCCCCCcc
Q 036185 321 DLFLLDPL--QGTIKAIHTEGSPSPRLGHTSSLI-G-DHMFIIGGRADPLNILSDVWVFNMAKS-KWTLLECSGSVFQPR 395 (1057)
Q Consensus 321 d~~~yd~~--t~~W~~l~~~~~P~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~g~~p~~R 395 (1057)
.+.+|++. ++++..+.....+. .-..++.. + ..+|+.+..+ +.+.+||+... ....+... +...
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~---~~~~ 129 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPG--SLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVV---EGLD 129 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSS--CCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEE---CCCT
T ss_pred eEEEEEecCCCCceeeccccccCC--CCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccc---cCCC
Confidence 45665554 77777654222221 22333333 3 3566654322 35888887422 22222211 1111
Q ss_pred cceEEEEE-C-CEEEEEcccCCCcccceEEEEECCC-CcEEEee--cCCCCCCCcceeEEEEE-CC-EEEEEecCCCCcc
Q 036185 396 HRHAAAVI-G-SKIYVFGGLNNDTIFSSLHVLDTDT-LQWKELL--INGEGPCARHSHSMLAY-GS-RLYMFGGYNGEKA 468 (1057)
Q Consensus 396 ~~hsa~~~-~-~~iyv~GG~~~~~~~~~v~~yD~~t-~~W~~~~--~~g~~P~~r~~~s~~~~-~~-~lyv~GG~~~~~~ 468 (1057)
.-++.++. + ..+|+.+..+ +.+.+||+.+ .++..+. ... .+....-..++.. ++ .+|+.+..+
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~pdg~~l~~~~~~~---- 199 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVT-TVEGAGPRHMVFHPNEQYAYCVNELN---- 199 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEE-CSTTCCEEEEEECTTSSEEEEEETTT----
T ss_pred CceEEEECCCCCEEEEecCCC-----CEEEEEEecCCCceeeecccccc-cCCCCCcceEEECCCCCEEEEEeCCC----
Confidence 12223333 3 3576655232 3589999987 7665433 110 1111111122222 33 466665432
Q ss_pred cCcEEEEECC--CCeEEEeeccCCCCCC---ceeeEEEEE---CCEEEEEeccCCCCCCCeEEEEECC--CCeEEEeec
Q 036185 469 LGDLYTFDVH--ACLWKKEDIAARSPHA---RFSHTMFLY---KNYLGLFGGCPVRQNYQELSLLDLQ--LHIWKHLKL 537 (1057)
Q Consensus 469 ~~~l~~yd~~--t~~W~~v~~~~~~P~~---R~~hs~~~~---~~~l~i~GG~~~~~~~~~i~~yd~~--~~~W~~v~~ 537 (1057)
+.+..||+. +..+.........|.. ......+.+ +..+|+.+.. ...+.+||+. +.+++.+..
T Consensus 200 -~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-----~~~i~v~d~~~~~~~~~~~~~ 272 (343)
T 1ri6_A 200 -SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT-----ASLITVFSVSEDGSVLSKEGF 272 (343)
T ss_dssp -TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT-----TTEEEEEEECTTSCCEEEEEE
T ss_pred -CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC-----CCEEEEEEEcCCCCceEEeee
Confidence 358888884 4554432222222221 111222333 3456665532 3478888887 556666643
No 390
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.39 E-value=6.7 Score=44.63 Aligned_cols=153 Identities=9% Similarity=0.076 Sum_probs=76.4
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCC--CCcEEE-eccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPL--QGTIKA-IHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~--t~~W~~-l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
+.|++.|+.++ .+.+||.. ++.... +.....+ ..-.+++.. ++..++.|+.+ ..++.++.
T Consensus 115 ~~l~~~~~~dg--------~v~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~~------g~v~~~~~ 178 (450)
T 2vdu_B 115 SRLIACADSDK--------SLLVFDVDKTSKNVLKLRKRFCFS--KRPNAISIAEDDTTVIIADKF------GDVYSIDI 178 (450)
T ss_dssp SEEEEEEGGGT--------EEEEEEECSSSSSCEEEEEEEECS--SCEEEEEECTTSSEEEEEETT------SEEEEEET
T ss_pred CEEEEEECCCC--------eEEEEECcCCCCceeeeeecccCC--CCceEEEEcCCCCEEEEEeCC------CcEEEEec
Confidence 45668887554 46677766 443322 2100111 111122222 45566666653 36888887
Q ss_pred CCCcEEEeeccCCCCC-cccceEEEE-EC---CEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE
Q 036185 378 AKSKWTLLECSGSVFQ-PRHRHAAAV-IG---SKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA 452 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~-~R~~hsa~~-~~---~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~ 452 (1057)
.+....... ...... ...-.+.+. -+ +++++.|+.++ .+.+||+.+.+.......+ ...........
T Consensus 179 ~~~~~~~~~-~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~--h~~~v~~~~~s 250 (450)
T 2vdu_B 179 NSIPEEKFT-QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYPQCFIVDKWLFG--HKHFVSSICCG 250 (450)
T ss_dssp TSCCCSSCC-CCCSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEESCTTCEEEECCC--CSSCEEEEEEC
T ss_pred CCccccccc-ceeeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECCCCceeeeeecC--CCCceEEEEEC
Confidence 665432100 000110 111122222 25 77888887764 4888998877644321111 11111222223
Q ss_pred ECCEEEEEecCCCCcccCcEEEEECCCCeEEE
Q 036185 453 YGSRLYMFGGYNGEKALGDLYTFDVHACLWKK 484 (1057)
Q Consensus 453 ~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~ 484 (1057)
++++++.|+.++ .+..||+.+.....
T Consensus 251 -d~~~l~s~~~d~-----~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 251 -KDYLLLSAGGDD-----KIFAWDWKTGKNLS 276 (450)
T ss_dssp -STTEEEEEESSS-----EEEEEETTTCCEEE
T ss_pred -CCCEEEEEeCCC-----eEEEEECCCCcEee
Confidence 777888887553 58899998876543
No 391
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.39 E-value=2.6 Score=46.80 Aligned_cols=188 Identities=10% Similarity=0.035 Sum_probs=92.6
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccC-CCCC-----------CccccEEEEECCEEEEEcccCCCCCCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTE-GSPS-----------PRLGHTSSLIGDHMFIIGGRADPLNILS 370 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~-~~P~-----------~R~~hs~v~~~~~Iyv~GG~~~~~~~~~ 370 (1057)
..++.|+.++ .+.+||+.+.+....-.. ..+. ...-.++....+..++.|+.++
T Consensus 162 ~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------ 227 (425)
T 1r5m_A 162 THIISMDVEN--------VTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG------ 227 (425)
T ss_dssp SEEEEEETTC--------CEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG------
T ss_pred CEEEEEecCC--------eEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC------
Confidence 3566666443 477888877654432211 1110 0002223333344466666543
Q ss_pred cEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeE
Q 036185 371 DVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHS 449 (1057)
Q Consensus 371 ~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s 449 (1057)
.+.+||+.+..-...- . .....-.+.+.. +++.++.|+.++ .+.+||..+.+....-. .....-.+
T Consensus 228 ~i~~~d~~~~~~~~~~---~-~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~----~~~~~i~~ 294 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKL---I-GHHGPISVLEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCFY----GHSQSIVS 294 (425)
T ss_dssp CEEEEETTCSSCSEEE---C-CCSSCEEEEEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEEC----CCSSCEEE
T ss_pred eEEEEEcCCCceeeee---c-cCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCccceEec----CCCccEEE
Confidence 6899998876432211 0 011111223333 455777777654 37888887654322211 11112233
Q ss_pred EEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECC
Q 036185 450 MLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQ 528 (1057)
Q Consensus 450 ~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~ 528 (1057)
+....+..++.|+.++ .+..||+.+..-........ ..-.+++.. ++.+++.|+.+ ..+.+||+.
T Consensus 295 ~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~----~~i~~~~~s~~~~~l~~~~~d-----g~i~i~~~~ 360 (425)
T 1r5m_A 295 ASWVGDDKVISCSMDG-----SVRLWSLKQNTLLALSIVDG----VPIFAGRISQDGQKYAVAFMD-----GQVNVYDLK 360 (425)
T ss_dssp EEEETTTEEEEEETTS-----EEEEEETTTTEEEEEEECTT----CCEEEEEECTTSSEEEEEETT-----SCEEEEECH
T ss_pred EEECCCCEEEEEeCCC-----cEEEEECCCCcEeEecccCC----ccEEEEEEcCCCCEEEEEECC-----CeEEEEECC
Confidence 4444333666676553 58899998776443211111 111222222 46677777643 368888887
Q ss_pred CCe
Q 036185 529 LHI 531 (1057)
Q Consensus 529 ~~~ 531 (1057)
+..
T Consensus 361 ~~~ 363 (425)
T 1r5m_A 361 KLN 363 (425)
T ss_dssp HHH
T ss_pred CCc
Confidence 654
No 392
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.24 E-value=9.9 Score=41.92 Aligned_cols=191 Identities=9% Similarity=-0.030 Sum_probs=94.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++.|+.++ .+.+||........+. .. ...-.+++.. ++..++.|+.++ .+.+||..+.
T Consensus 120 ~~~l~~~~~dg--------~i~i~~~~~~~~~~~~--~~--~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~ 181 (425)
T 1r5m_A 120 GNSIVTGVENG--------ELRLWNKTGALLNVLN--FH--RAPIVSVKWNKDGTHIISMDVEN------VTILWNVISG 181 (425)
T ss_dssp SSEEEEEETTS--------CEEEEETTSCEEEEEC--CC--CSCEEEEEECTTSSEEEEEETTC------CEEEEETTTT
T ss_pred CCEEEEEeCCC--------eEEEEeCCCCeeeecc--CC--CccEEEEEECCCCCEEEEEecCC------eEEEEECCCC
Confidence 35777777543 4777885444444443 11 1111222222 455566666543 5889999887
Q ss_pred cEEEeeccCCCC-----------CcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeE
Q 036185 381 KWTLLECSGSVF-----------QPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHS 449 (1057)
Q Consensus 381 ~W~~~~~~g~~p-----------~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s 449 (1057)
.....-.....+ ....-.+.+...+..++.|+.++ .+..||+.+.+-...-. .....-.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~i~~~d~~~~~~~~~~~----~~~~~i~~ 252 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG-----AIFVYQITEKTPTGKLI----GHHGPISV 252 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG-----CEEEEETTCSSCSEEEC----CCSSCEEE
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC-----eEEEEEcCCCceeeeec----cCCCceEE
Confidence 654432111111 00002223333344466666543 58999988764322211 01111223
Q ss_pred EEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEEC
Q 036185 450 MLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDL 527 (1057)
Q Consensus 450 ~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~ 527 (1057)
++.. ++..++.|+.++ .+..||+.+....... . .....-.++... ++ +++.|+.+ ..+.+||+
T Consensus 253 ~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~--~--~~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~ 317 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDG-----TLRIWHGGNGNSQNCF--Y--GHSQSIVSASWVGDD-KVISCSMD-----GSVRLWSL 317 (425)
T ss_dssp EEEETTTTEEEEEETTS-----CEEEECSSSBSCSEEE--C--CCSSCEEEEEEETTT-EEEEEETT-----SEEEEEET
T ss_pred EEECCCCCEEEEEcCCC-----EEEEEECCCCccceEe--c--CCCccEEEEEECCCC-EEEEEeCC-----CcEEEEEC
Confidence 3333 455777777554 4888888765432221 1 111122333333 45 66666632 47999999
Q ss_pred CCCeEEE
Q 036185 528 QLHIWKH 534 (1057)
Q Consensus 528 ~~~~W~~ 534 (1057)
.+.+-..
T Consensus 318 ~~~~~~~ 324 (425)
T 1r5m_A 318 KQNTLLA 324 (425)
T ss_dssp TTTEEEE
T ss_pred CCCcEeE
Confidence 8876443
No 393
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.19 E-value=10 Score=41.26 Aligned_cols=146 Identities=10% Similarity=0.101 Sum_probs=77.8
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
++. ++.|+.++ .+.+||+.+......- .+. ...-.+.+.. ++.+++.|+.++. +..||+.+..
T Consensus 154 ~~~-l~s~s~d~------~i~~wd~~~~~~~~~~-~~h---~~~v~~~~~~~~~~~l~sg~~d~~-----v~~wd~~~~~ 217 (340)
T 1got_B 154 DNQ-IVTSSGDT------TCALWDIETGQQTTTF-TGH---TGDVMSLSLAPDTRLFVSGACDAS-----AKLWDVREGM 217 (340)
T ss_dssp TTE-EEEEETTS------CEEEEETTTTEEEEEE-CCC---SSCEEEEEECTTSSEEEEEETTSC-----EEEEETTTCS
T ss_pred CCc-EEEEECCC------cEEEEECCCCcEEEEE-cCC---CCceEEEEECCCCCEEEEEeCCCc-----EEEEECCCCe
Confidence 455 45555443 6889999887654321 110 1111222222 5567888887653 8889988775
Q ss_pred EEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEE
Q 036185 432 WKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLG 508 (1057)
Q Consensus 432 W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~ 508 (1057)
-...-. + . ...-.+++.. ++..++.|+.++ .+..||+.+..-..... .+.......++.+ ++.++
T Consensus 218 ~~~~~~-~--h-~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd~~~~~~~~~~~---~~~~~~~v~~~~~s~~g~~l 285 (340)
T 1got_B 218 CRQTFT-G--H-ESDINAICFFPNGNAFATGSDDA-----TCRLFDLRADQELMTYS---HDNIICGITSVSFSKSGRLL 285 (340)
T ss_dssp EEEEEC-C--C-SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CTTCCSCEEEEEECTTSSEE
T ss_pred eEEEEc-C--C-cCCEEEEEEcCCCCEEEEEcCCC-----cEEEEECCCCcEEEEEc---cCCcccceEEEEECCCCCEE
Confidence 433211 0 0 1111222222 466777887665 48889988765432211 1111112233333 56677
Q ss_pred EEeccCCCCCCCeEEEEECCCCe
Q 036185 509 LFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 509 i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+.|+.+ ..+.+||..+..
T Consensus 286 ~~g~~d-----~~i~vwd~~~~~ 303 (340)
T 1got_B 286 LAGYDD-----FNCNVWDALKAD 303 (340)
T ss_dssp EEEETT-----SEEEEEETTTCC
T ss_pred EEECCC-----CeEEEEEcccCc
Confidence 777743 368899987654
No 394
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.16 E-value=5.7 Score=47.40 Aligned_cols=117 Identities=11% Similarity=0.168 Sum_probs=66.6
Q ss_pred EEEEEcccCCCCCCcccccEEEEeC-CCCc--EEEeccCCCC-C--C---ccccEEEEECCEEEEEcccCCCCCCCCcEE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDP-LQGT--IKAIHTEGSP-S--P---RLGHTSSLIGDHMFIIGGRADPLNILSDVW 373 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~-~t~~--W~~l~~~~~P-~--~---R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~ 373 (1057)
.||+.... .+.++.+|. .+++ |+.-...... . + ....+.++.+++||+... ...++
T Consensus 64 ~vyv~~~~--------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l~ 128 (571)
T 2ad6_A 64 MMYVHSAF--------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------NGHLL 128 (571)
T ss_dssp EEEEECST--------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEEE
T ss_pred EEEEEeCC--------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------CCEEE
Confidence 48887652 246899999 7765 7753211100 0 0 112234567889988643 24699
Q ss_pred EEECCCCc--EEEeeccCCCCC-cccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEee
Q 036185 374 VFNMAKSK--WTLLECSGSVFQ-PRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELL 436 (1057)
Q Consensus 374 ~yd~~t~~--W~~~~~~g~~p~-~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~ 436 (1057)
.+|..+.+ |+.-.. ..+. .....+.++.++.+|+-.+......-..++.||+.+.+ |+.-.
T Consensus 129 alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 129 ALDAKTGKINWEVEVC--DPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEETTTCCEEEEEECC--CGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEECCCCCEEEEecCC--CCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 99998874 875421 1111 11223345568888875432111123569999998775 87653
No 395
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.12 E-value=7.5 Score=43.39 Aligned_cols=181 Identities=9% Similarity=0.098 Sum_probs=95.6
Q ss_pred cEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceE
Q 036185 321 DLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHA 399 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hs 399 (1057)
.+.++|..+++...... .+....-.+++.. ++..++.|+.++ .+.+||+.+......-. .....-.
T Consensus 114 ~v~lw~~~~~~~~~~~~--~~~~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~~~-----~~~~~v~ 180 (401)
T 4aez_A 114 NVYVWNADSGSVSALAE--TDESTYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLRTMA-----GHQARVG 180 (401)
T ss_dssp EEEEEETTTCCEEEEEE--CCTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEEC-----CCSSCEE
T ss_pred eEEEeeCCCCcEeEeee--cCCCCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEEEec-----CCCCceE
Confidence 58889998887665432 1111112222222 456677777644 68999998876543321 1112223
Q ss_pred EEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECC
Q 036185 400 AAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVH 478 (1057)
Q Consensus 400 a~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~ 478 (1057)
+...++.+++.|+.++ .+..||+.+..-......+ ....-.++... ++.+++.|+.++ .+..||+.
T Consensus 181 ~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~ 247 (401)
T 4aez_A 181 CLSWNRHVLSSGSRSG-----AIHHHDVRIANHQIGTLQG---HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDAR 247 (401)
T ss_dssp EEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETT
T ss_pred EEEECCCEEEEEcCCC-----CEEEEecccCcceeeEEcC---CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCC
Confidence 3334666777777654 4888998743322111111 01111222222 566788887654 48899998
Q ss_pred CCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 479 ACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 479 t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
+..-..... . ....-.+++.. +..+++.||.. ....+.+||+.+.+...
T Consensus 248 ~~~~~~~~~--~--~~~~v~~~~~~p~~~~ll~~~~gs---~d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 248 SSIPKFTKT--N--HNAAVKAVAWCPWQSNLLATGGGT---MDKQIHFWNAATGARVN 298 (401)
T ss_dssp CSSEEEEEC--C--CSSCCCEEEECTTSTTEEEEECCT---TTCEEEEEETTTCCEEE
T ss_pred CCCccEEec--C--CcceEEEEEECCCCCCEEEEecCC---CCCEEEEEECCCCCEEE
Confidence 765433211 1 11111222222 45677777511 23479999998876543
No 396
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.88 E-value=9.5 Score=40.43 Aligned_cols=188 Identities=10% Similarity=0.083 Sum_probs=94.7
Q ss_pred ccEEEEeCCCCcEEEeccCCC-CCCccccEEEEE-C-CEEEEEcccCCCCCCCCcEEEEECCCCcEEEe-eccCCCCCcc
Q 036185 320 NDLFLLDPLQGTIKAIHTEGS-PSPRLGHTSSLI-G-DHMFIIGGRADPLNILSDVWVFNMAKSKWTLL-ECSGSVFQPR 395 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~-P~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~-~~~g~~p~~R 395 (1057)
..+++||+.++++..+..... .....-++++.. + +++|+.... +.+++||+. ++...+ ..........
T Consensus 46 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~~l~~~d~~-g~~~~~~~~~~~~~~~~ 117 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------LGLLVVQTD-GTFEEIAKKDSEGRRMQ 117 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------TEEEEEETT-SCEEECCSBCTTSCBCB
T ss_pred CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------CCEEEEeCC-CCEEEEEeccCCCcccc
Confidence 468999999998877642100 011112233333 4 688887542 269999998 777655 3211111111
Q ss_pred cceEEEEE-CCEEEEEcccCC----------CcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-----CC-EEE
Q 036185 396 HRHAAAVI-GSKIYVFGGLNN----------DTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-----GS-RLY 458 (1057)
Q Consensus 396 ~~hsa~~~-~~~iyv~GG~~~----------~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-----~~-~ly 458 (1057)
.-+..++. ++++|+.....+ ......+++||+. .+...+.... . .....+.. ++ .+|
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~---~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF--Q---FPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE--S---SEEEEEEEECTTSCEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC--C---CcceEEEecccCCCCCEEE
Confidence 12233332 567887653221 1123579999987 6665543211 1 11233333 23 467
Q ss_pred EEecCCCCcccCcEEEEECC-CCeEEEeeccCCCCCC--ceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCe
Q 036185 459 MFGGYNGEKALGDLYTFDVH-ACLWKKEDIAARSPHA--RFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 459 v~GG~~~~~~~~~l~~yd~~-t~~W~~v~~~~~~P~~--R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+.... .+.+++||+. +..+.........+.. ..-..++.- ++.+|+... ..+.+.+||+.+.+
T Consensus 192 v~~~~-----~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-----~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 192 VAETP-----TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW-----GSSHIEVFGPDGGQ 258 (314)
T ss_dssp EEETT-----TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE-----TTTEEEEECTTCBS
T ss_pred EEECC-----CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc-----CCCEEEEEcCCCCc
Confidence 66432 2468999876 4544322111111211 112223332 567877643 12479999998543
No 397
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=92.72 E-value=7.6 Score=41.50 Aligned_cols=195 Identities=9% Similarity=0.030 Sum_probs=88.2
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCC-CCcEEEeccCCCCCCccccEEEEE-C-CEEEEEcccCCCCCCCCcEEEEECC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPL-QGTIKAIHTEGSPSPRLGHTSSLI-G-DHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~-t~~W~~l~~~~~P~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
+.+|+.++.+ +.+.+||+. ++++..+.... ....-+.++.. + ..+|+.+. .. ..+.+|++.
T Consensus 5 ~~l~~~~~~~--------~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~-~~-----~~v~~~~~~ 68 (343)
T 1ri6_A 5 QTVYIASPES--------QQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGVR-PE-----FRVLAYRIA 68 (343)
T ss_dssp EEEEEEEGGG--------TEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEET-TT-----TEEEEEEEC
T ss_pred EEEEEeCCCC--------CeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEeec-CC-----CeEEEEEec
Confidence 3466665432 356777663 45555443211 11111223332 3 35665543 21 467777776
Q ss_pred --CCcEEEeeccCCCCCcccceEEEEE-CC-EEEEEcccCCCcccceEEEEECCCCc-EEEeecCCCCCCCcceeEEEEE
Q 036185 379 --KSKWTLLECSGSVFQPRHRHAAAVI-GS-KIYVFGGLNNDTIFSSLHVLDTDTLQ-WKELLINGEGPCARHSHSMLAY 453 (1057)
Q Consensus 379 --t~~W~~~~~~g~~p~~R~~hsa~~~-~~-~iyv~GG~~~~~~~~~v~~yD~~t~~-W~~~~~~g~~P~~r~~~s~~~~ 453 (1057)
++++..+... +.+..-...++. ++ .+|+.+..+ +.+.+||+.... ...+.... ....-++++..
T Consensus 69 ~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~s 137 (343)
T 1ri6_A 69 PDDGALTFAAES---ALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVE---GLDGCHSANIS 137 (343)
T ss_dssp TTTCCEEEEEEE---ECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEEC---CCTTBCCCEEC
T ss_pred CCCCceeecccc---ccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCcccccccccc---CCCCceEEEEC
Confidence 7788766422 111112223332 34 455554322 347788874222 22222211 11112222222
Q ss_pred --CCEEEEEecCCCCcccCcEEEEECCC-CeEEEee--ccCCCCCCceeeEEEEE-C-CEEEEEeccCCCCCCCeEEEEE
Q 036185 454 --GSRLYMFGGYNGEKALGDLYTFDVHA-CLWKKED--IAARSPHARFSHTMFLY-K-NYLGLFGGCPVRQNYQELSLLD 526 (1057)
Q Consensus 454 --~~~lyv~GG~~~~~~~~~l~~yd~~t-~~W~~v~--~~~~~P~~R~~hs~~~~-~-~~l~i~GG~~~~~~~~~i~~yd 526 (1057)
++.+|+.+..+ +.+.+||+.+ ..+..+. .. ..+....-..++.. + ..+|+.+. ..+.+.+||
T Consensus 138 ~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~-----~~~~i~~~~ 206 (343)
T 1ri6_A 138 PDNRTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEV-TTVEGAGPRHMVFHPNEQYAYCVNE-----LNSSVDVWE 206 (343)
T ss_dssp TTSSEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEE-ECSTTCCEEEEEECTTSSEEEEEET-----TTTEEEEEE
T ss_pred CCCCEEEEecCCC-----CEEEEEEecCCCceeeeccccc-ccCCCCCcceEEECCCCCEEEEEeC-----CCCEEEEEE
Confidence 33576665332 3589999987 6665432 11 11111111122222 3 35666654 234788888
Q ss_pred CC--CCeEEE
Q 036185 527 LQ--LHIWKH 534 (1057)
Q Consensus 527 ~~--~~~W~~ 534 (1057)
+. +.++..
T Consensus 207 ~~~~~g~~~~ 216 (343)
T 1ri6_A 207 LKDPHGNIEC 216 (343)
T ss_dssp SSCTTSCCEE
T ss_pred ecCCCCcEEE
Confidence 84 344443
No 398
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.63 E-value=13 Score=40.60 Aligned_cols=207 Identities=11% Similarity=0.089 Sum_probs=102.5
Q ss_pred EEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEE
Q 036185 322 LFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAA 401 (1057)
Q Consensus 322 ~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~ 401 (1057)
++.-.-.-.+|+.+............++...++.+|+.|- . ..+++-+-...+|+.+......| -.....+
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~-~------g~i~~S~DgG~tW~~~~~~~~~~--~~~~~i~ 128 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGE-P------PIMLHTTDGGQSWSQIPLDPKLP--GSPRLIK 128 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEE-T------TEEEEESSTTSSCEECCCCTTCS--SCEEEEE
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEEC-C------CeEEEECCCCCCceECccccCCC--CCeEEEE
Confidence 4443333458998753211112233444445678888753 2 13554333357899986321122 1123333
Q ss_pred E-ECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECC-
Q 036185 402 V-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVH- 478 (1057)
Q Consensus 402 ~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~- 478 (1057)
. -++.+|+.|.. + .+++-+-.-.+|+.+... .+..-++++.. ++.+|++| ..+ .+++-+-.
T Consensus 129 ~~~~~~~~~~~~~-g-----~v~~S~DgG~tW~~~~~~----~~~~~~~~~~~~~~~~~~~g-~~G-----~~~~S~d~g 192 (327)
T 2xbg_A 129 ALGNGSAEMITNV-G-----AIYRTKDSGKNWQALVQE----AIGVMRNLNRSPSGEYVAVS-SRG-----SFYSTWEPG 192 (327)
T ss_dssp EEETTEEEEEETT-C-----CEEEESSTTSSEEEEECS----CCCCEEEEEECTTSCEEEEE-TTS-----SEEEEECTT
T ss_pred EECCCCEEEEeCC-c-----cEEEEcCCCCCCEEeecC----CCcceEEEEEcCCCcEEEEE-CCC-----cEEEEeCCC
Confidence 3 46788887642 1 244433345689998752 22233444443 45566654 222 35554333
Q ss_pred CCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECC-CCeEEEeeccCCCCCcccceEEEEe-CC
Q 036185 479 ACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQ-LHIWKHLKLNYVCKELFVRSTANVV-DD 555 (1057)
Q Consensus 479 t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~-~~~W~~v~~~~~~~~~~~~~~a~~~-~~ 555 (1057)
..+|+.+.. +.+...+.++.. ++.+|+.+.. ..+++.+.. -.+|+.+..+..+.. ..-.+.+.. ++
T Consensus 193 G~tW~~~~~----~~~~~~~~~~~~~~g~~~~~~~~------G~~~~s~~D~G~tW~~~~~~~~~~~-~~~~~v~~~~~~ 261 (327)
T 2xbg_A 193 QTAWEPHNR----TTSRRLHNMGFTPDGRLWMIVNG------GKIAFSDPDNSENWGELLSPLRRNS-VGFLDLAYRTPN 261 (327)
T ss_dssp CSSCEEEEC----CSSSCEEEEEECTTSCEEEEETT------TEEEEEETTEEEEECCCBCTTSSCC-SCEEEEEESSSS
T ss_pred CCceeECCC----CCCCccceeEECCCCCEEEEeCC------ceEEEecCCCCCeeEeccCCcccCC-cceEEEEecCCC
Confidence 578998732 233334444433 5677777641 135554333 568988754311111 111222222 56
Q ss_pred EEEEEeCCC
Q 036185 556 DLIMIGGGA 564 (1057)
Q Consensus 556 ~iyi~GGg~ 564 (1057)
.+|++|+..
T Consensus 262 ~~~~~g~~g 270 (327)
T 2xbg_A 262 EVWLAGGAG 270 (327)
T ss_dssp CEEEEESTT
T ss_pred EEEEEeCCC
Confidence 788887643
No 399
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.61 E-value=5.7 Score=42.62 Aligned_cols=191 Identities=5% Similarity=-0.109 Sum_probs=96.8
Q ss_pred CcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-C-CEEEEEcccCCCCCCCCcEEEEECC
Q 036185 301 DSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-G-DHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 301 ~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~-~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
.+.+|+.++.+ +.+.+||+.+++...... .+ .....++.. + ..+|+.+..+ +.+++||+.
T Consensus 9 ~~~~~v~~~~~--------~~v~~~d~~~~~~~~~~~--~~--~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQHL--------RRISFFSTDTLEILNQIT--LG--YDFVDTAITSDCSNVVVTSDFC------QTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGGG--------TEEEEEETTTCCEEEEEE--CC--CCEEEEEECSSSCEEEEEESTT------CEEEEEECS
T ss_pred CCEEEEEecCC--------CeEEEEeCcccceeeeEE--cc--CCcceEEEcCCCCEEEEEeCCC------CeEEEEECC
Confidence 35688877633 478999999988765432 12 111233332 3 3577765532 379999998
Q ss_pred CCcE-EEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-C
Q 036185 379 KSKW-TLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-G 454 (1057)
Q Consensus 379 t~~W-~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~ 454 (1057)
+... ......+. .+ .++.++. +..+| .+...+ ....+++||+.+.+....-..+. ..+.++.. +
T Consensus 71 ~~~~~~~~~~~~~--~~--~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~~~-----~~~~~~~spd 138 (331)
T 3u4y_A 71 LEPPKVVAIQEGQ--SS--MADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPIPY-----DAVGIAISPN 138 (331)
T ss_dssp SSSCEEEEEEECS--SC--CCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEECCT-----TEEEEEECTT
T ss_pred CCceeEEecccCC--CC--ccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEECCC-----CccceEECCC
Confidence 8874 22221111 11 1212332 33466 332221 12369999999887655433221 12344433 3
Q ss_pred C-EEEEEecCCCCcccCc-EEEEECCCCe-EEEeeccCCCCCCceeeEEEEE-CC-EEEEEeccCCCCCCCeEEEEECCC
Q 036185 455 S-RLYMFGGYNGEKALGD-LYTFDVHACL-WKKEDIAARSPHARFSHTMFLY-KN-YLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 455 ~-~lyv~GG~~~~~~~~~-l~~yd~~t~~-W~~v~~~~~~P~~R~~hs~~~~-~~-~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
+ .+|+.+..+ +. +..|++.... ..... ....+.......++.. ++ .+|+.+. ..+.+.+||+.+
T Consensus 139 g~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~-----~~~~v~v~d~~~ 207 (331)
T 3u4y_A 139 GNGLILIDRSS-----ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANL-----IGNSIGILETQN 207 (331)
T ss_dssp SSCEEEEEETT-----TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEET-----TTTEEEEEECSS
T ss_pred CCEEEEEecCC-----CceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeC-----CCCeEEEEECCC
Confidence 3 477765532 34 6667665322 11110 0001111112233333 34 5776654 235799999987
Q ss_pred CeE
Q 036185 530 HIW 532 (1057)
Q Consensus 530 ~~W 532 (1057)
.+.
T Consensus 208 ~~~ 210 (331)
T 3u4y_A 208 PEN 210 (331)
T ss_dssp TTS
T ss_pred Ccc
Confidence 764
No 400
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.58 E-value=2.4 Score=45.78 Aligned_cols=158 Identities=18% Similarity=0.186 Sum_probs=77.0
Q ss_pred CcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 301 DSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 301 ~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
++++|+.++.+ +.++++|+.+++....- ..+....-+.++.. +..+|+.+..+ ..+++||+.
T Consensus 10 ~~~~~v~~~~~--------~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~s~dg~~~~v~~~~~------~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP--------NNLHVVDVASDTVYKSC--VMPDKFGPGTAMMAPDNRTAYVLNNHY------GDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT--------TEEEEEETTTTEEEEEE--ECSSCCSSCEEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred CCEEEEEeCCC--------CeEEEEECCCCcEEEEE--ecCCCCCCceeEECCCCCEEEEEeCCC------CcEEEEeCC
Confidence 34688877643 46899999988754322 11210012334433 33677776432 479999999
Q ss_pred CCcEEEeeccCCCCC--cccceEEEEE-CC-EEEEEccc---CCCc---ccceEEEEECCCCcEEEeecCCCCCCCccee
Q 036185 379 KSKWTLLECSGSVFQ--PRHRHAAAVI-GS-KIYVFGGL---NNDT---IFSSLHVLDTDTLQWKELLINGEGPCARHSH 448 (1057)
Q Consensus 379 t~~W~~~~~~g~~p~--~R~~hsa~~~-~~-~iyv~GG~---~~~~---~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~ 448 (1057)
+.+....-..+..+. ...-+..++. ++ .+|+.+.. .... ..+.+++||+.+.+-.........|. .-.
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~ 151 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR--QVY 151 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS--SCC
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC--ccc
Confidence 887543321111111 1111233332 34 45554421 0000 12579999988743211100000122 122
Q ss_pred EEEE-ECCEEEEEecCCCCcccCcEEEEECCCCeEEE
Q 036185 449 SMLA-YGSRLYMFGGYNGEKALGDLYTFDVHACLWKK 484 (1057)
Q Consensus 449 s~~~-~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~ 484 (1057)
+++. -++++|+.++ ++++||+.+.+...
T Consensus 152 ~~~~s~dg~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 152 LMRAADDGSLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp CEEECTTSCEEEESS--------SEEEECTTTCCEEE
T ss_pred ceeECCCCcEEEccC--------cEEEEeCCCCceec
Confidence 2222 3556776422 38889988776543
No 401
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.54 E-value=12 Score=39.23 Aligned_cols=213 Identities=7% Similarity=-0.054 Sum_probs=110.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+|+.... ...++.||+. +++..+..+. ....-++++.. ++++|+.... ...+++||+ +.
T Consensus 68 g~l~v~~~~--------~~~i~~~~~~-g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g 129 (299)
T 2z2n_A 68 GEVWFTENA--------ANKIGRITKK-GIIKEYTLPN--PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DG 129 (299)
T ss_dssp SCEEEEETT--------TTEEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TC
T ss_pred CCEEEeCCC--------CCeEEEECCC-CcEEEEeCCC--cCCCceeeEECCCCCEEEEecC------CceEEEECC-CC
Confidence 357776432 2358889986 5565554210 11222344443 4688886533 246899998 66
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLY 458 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~ly 458 (1057)
+........ ....-++.+.. ++++|+.... .+.+++||+ +.++........ ...-.+++.. ++.+|
T Consensus 130 ~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~ 197 (299)
T 2z2n_A 130 KIREYELPN---KGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALW 197 (299)
T ss_dssp CEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEE
T ss_pred CEEEecCCC---CCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEE
Confidence 666554211 11222333333 5678875421 245899999 777776533211 1112233332 46788
Q ss_pred EEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeec
Q 036185 459 MFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKL 537 (1057)
Q Consensus 459 v~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~ 537 (1057)
+.... .+.+++||+ +..+......... ..-.+++.- ++.+|+... ..+.+++||+ +.+...+..
T Consensus 198 v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~-----~~~~i~~~d~-~g~~~~~~~ 262 (299)
T 2z2n_A 198 FVEII-----GNKIGRITT-SGEITEFKIPTPN---ARPHAITAGAGIDLWFTEW-----GANKIGRLTS-NNIIEEYPI 262 (299)
T ss_dssp EEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECSTTCEEEEET-----TTTEEEEEET-TTEEEEEEC
T ss_pred EEccC-----CceEEEECC-CCcEEEEECCCCC---CCceeEEECCCCCEEEecc-----CCceEEEECC-CCceEEEeC
Confidence 76532 246899999 7777654221111 112233332 567777642 2357999999 455555542
Q ss_pred cCCCCCcccceEEEEeCCEEEEEeC
Q 036185 538 NYVCKELFVRSTANVVDDDLIMIGG 562 (1057)
Q Consensus 538 ~~~~~~~~~~~~a~~~~~~iyi~GG 562 (1057)
+... ......+. -++.+|+...
T Consensus 263 ~~~~--~~~~~i~~-~~g~l~v~~~ 284 (299)
T 2z2n_A 263 QIKS--AEPHGICF-DGETIWFAME 284 (299)
T ss_dssp SSSS--CCEEEEEE-CSSCEEEEET
T ss_pred CCCC--CccceEEe-cCCCEEEEec
Confidence 2111 11222333 5677887653
No 402
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.46 E-value=2.8 Score=44.86 Aligned_cols=63 Identities=5% Similarity=0.151 Sum_probs=35.7
Q ss_pred CEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-C---CEEEEEcccCCCcccceEEEEECCC
Q 036185 354 DHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-G---SKIYVFGGLNNDTIFSSLHVLDTDT 429 (1057)
Q Consensus 354 ~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~---~~iyv~GG~~~~~~~~~v~~yD~~t 429 (1057)
+.+++.|+.++ .+.++|+.+..|..+.... .....-.++.+ . +.+++.|+.++ .+..||+.+
T Consensus 67 g~~l~s~s~D~------~v~iWd~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~ 132 (297)
T 2pm7_B 67 GTILASCSYDG------KVMIWKEENGRWSQIAVHA---VHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKE 132 (297)
T ss_dssp CSEEEEEETTT------EEEEEEBSSSCBCCCEEEC---CCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCS
T ss_pred CCEEEEEcCCC------EEEEEEcCCCceEEEEEee---cCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecC
Confidence 56777777654 6888999887775443211 11111122222 2 45677777654 367777765
Q ss_pred C
Q 036185 430 L 430 (1057)
Q Consensus 430 ~ 430 (1057)
.
T Consensus 133 ~ 133 (297)
T 2pm7_B 133 N 133 (297)
T ss_dssp S
T ss_pred C
Confidence 4
No 403
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.41 E-value=12 Score=39.11 Aligned_cols=202 Identities=6% Similarity=-0.100 Sum_probs=106.1
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
+.++.||+. +.+....... ....-++++.. ++.+|+..... ..+++||+. ..+...... .....-+
T Consensus 36 ~~v~~~d~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~---~~~~~~~ 102 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPLPT--PDAKVMCLTISSDGEVWFTENAA------NKIGRITKK-GIIKEYTLP---NPDSAPY 102 (299)
T ss_dssp TEEEEECTT-CCEEEEECSS--TTCCEEEEEECTTSCEEEEETTT------TEEEEECTT-SCEEEEECS---STTCCEE
T ss_pred CcEEEEcCC-CCeEEecCCc--ccCceeeEEECCCCCEEEeCCCC------CeEEEECCC-CcEEEEeCC---CcCCCce
Confidence 468899998 7777664221 11222333332 56788764322 358999986 556555411 1112223
Q ss_pred EEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEE
Q 036185 399 AAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFD 476 (1057)
Q Consensus 399 sa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd 476 (1057)
+.++. ++++|+.... .+.+++||+ +.+........ ....-..++.. ++.+|+.... .+.+++||
T Consensus 103 ~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~ 168 (299)
T 2z2n_A 103 GITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYPSFITLGSDNALWFTENQ-----NNAIGRIT 168 (299)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCEEEEEECTTSCEEEEETT-----TTEEEEEC
T ss_pred eeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCCceEEEcCCCCEEEEeCC-----CCEEEEEc
Confidence 33333 4678886533 235889998 66666554321 11222333333 4678876421 24689999
Q ss_pred CCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE-eC
Q 036185 477 VHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV-VD 554 (1057)
Q Consensus 477 ~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~-~~ 554 (1057)
+ +..+......... ..-.+++.- ++.+|+... ..+.+++||+ +..+..+...... ... .+.+. -+
T Consensus 169 ~-~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~-----~~~~i~~~~~-~g~~~~~~~~~~~--~~~-~~i~~~~~ 235 (299)
T 2z2n_A 169 E-SGDITEFKIPTPA---SGPVGITKGNDDALWFVEI-----IGNKIGRITT-SGEITEFKIPTPN--ARP-HAITAGAG 235 (299)
T ss_dssp T-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEET-----TTTEEEEECT-TCCEEEEECSSTT--CCE-EEEEECST
T ss_pred C-CCcEEEeeCCCCC---CcceeEEECCCCCEEEEcc-----CCceEEEECC-CCcEEEEECCCCC--CCc-eeEEECCC
Confidence 9 7777654221111 112233333 467777653 2347999999 7777665432111 111 12222 25
Q ss_pred CEEEEEe
Q 036185 555 DDLIMIG 561 (1057)
Q Consensus 555 ~~iyi~G 561 (1057)
+.+|+..
T Consensus 236 g~l~v~~ 242 (299)
T 2z2n_A 236 IDLWFTE 242 (299)
T ss_dssp TCEEEEE
T ss_pred CCEEEec
Confidence 6788875
No 404
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.35 E-value=4.4 Score=49.94 Aligned_cols=189 Identities=8% Similarity=0.028 Sum_probs=96.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+..+++|+.+ ..+.+||..+++....-. ..+.+ -.+++.. ++..+++||.++ .+.+||..++
T Consensus 25 ~~~la~~~~~--------g~v~iwd~~~~~~~~~~~-~~~~~--v~~~~~s~~~~~l~~~~~dg------~i~vw~~~~~ 87 (814)
T 3mkq_A 25 EPWVLTTLYS--------GRVEIWNYETQVEVRSIQ-VTETP--VRAGKFIARKNWIIVGSDDF------RIRVFNYNTG 87 (814)
T ss_dssp SSEEEEEETT--------SEEEEEETTTTEEEEEEE-CCSSC--EEEEEEEGGGTEEEEEETTS------EEEEEETTTC
T ss_pred CCEEEEEeCC--------CEEEEEECCCCceEEEEe-cCCCc--EEEEEEeCCCCEEEEEeCCC------eEEEEECCCC
Confidence 3567777643 358889988776443221 11111 1122222 456667777543 6899999888
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCC-cEEEeecCCCCCCCcceeEEEEE--CCE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTL-QWKELLINGEGPCARHSHSMLAY--GSR 456 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~-~W~~~~~~g~~P~~r~~~s~~~~--~~~ 456 (1057)
.....-. + ....-.+.+.. ++..++.|+.++ .+.+||..+. .....-.. ....-.+++.. ++.
T Consensus 88 ~~~~~~~-~---~~~~v~~~~~s~~~~~l~~~~~dg-----~i~vw~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 88 EKVVDFE-A---HPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNWENNWALEQTFEG----HEHFVMCVAFNPKDPS 154 (814)
T ss_dssp CEEEEEE-C---CSSCEEEEEECSSSSEEEEEETTS-----EEEEEEGGGTSEEEEEEEC----CSSCEEEEEEETTEEE
T ss_pred cEEEEEe-c---CCCCEEEEEEeCCCCEEEEEcCCC-----EEEEEECCCCceEEEEEcC----CCCcEEEEEEEcCCCC
Confidence 7644321 1 11111122222 455666666544 4888898776 33222211 11112233333 356
Q ss_pred EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE---CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY---KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~---~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
.++.|+.++ .+..||+.+..-....... . .....++... ++..++.|+.+ ..+.+||+.+..-.
T Consensus 155 ~l~~~~~dg-----~v~vwd~~~~~~~~~~~~~-~--~~~v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 155 TFASGCLDR-----TVKVWSLGQSTPNFTLTTG-Q--ERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCV 221 (814)
T ss_dssp EEEEEETTS-----EEEEEETTCSSCSEEEECC-C--TTCCCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEE
T ss_pred EEEEEeCCC-----eEEEEECCCCcceeEEecC-C--CCCEEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEE
Confidence 777777654 4888998654422211111 1 1111122222 56677777743 37899998877643
No 405
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.14 E-value=5.7 Score=43.18 Aligned_cols=157 Identities=11% Similarity=0.098 Sum_probs=78.9
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCC--CcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAK--SKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTD 428 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~ 428 (1057)
+++.++.|+.++ .+.+||+.. ..+..+... ......-.++.+ ++.+++.|+.++. +.+||..
T Consensus 118 ~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~l~s~s~D~~-----i~iW~~~ 183 (330)
T 2hes_X 118 DGYYLATCSRDK------SVWIWETDESGEEYECISVL---QEHSQDVKHVIWHPSEALLASSSYDDT-----VRIWKDY 183 (330)
T ss_dssp TSCEEEEEETTS------CEEEEECCTTCCCCEEEEEE---CCCSSCEEEEEECSSSSEEEEEETTSC-----EEEEEEE
T ss_pred CCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEe---ccCCCceEEEEECCCCCEEEEEcCCCe-----EEEEECC
Confidence 456777777654 588888843 344443311 111111222222 4567777877653 7778877
Q ss_pred CCcEEEeecCCCCCCCcceeEEEEEC---CEEEEEecCCCCcccCcEEEEECCC------CeEEEeeccCCCCCCceeeE
Q 036185 429 TLQWKELLINGEGPCARHSHSMLAYG---SRLYMFGGYNGEKALGDLYTFDVHA------CLWKKEDIAARSPHARFSHT 499 (1057)
Q Consensus 429 t~~W~~~~~~g~~P~~r~~~s~~~~~---~~lyv~GG~~~~~~~~~l~~yd~~t------~~W~~v~~~~~~P~~R~~hs 499 (1057)
+..|..+........ .-.++.... +..++.|+.++. +..||+.+ ..|........ .....-.+
T Consensus 184 ~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~D~~-----v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~ 255 (330)
T 2hes_X 184 DDDWECVAVLNGHEG--TVWSSDFDKTEGVFRLCSGSDDST-----VRVWKYMGDDEDDQQEWVCEAILPD-VHKRQVYN 255 (330)
T ss_dssp TTEEEEEEEECCCSS--CEEEEEECCSSSSCEEEEEETTSC-----EEEEEEEEECTTSCEEEEEEEECCS-CCSSCEEE
T ss_pred CCCeeEEEEccCCCC--cEEEEEecCCCCeeEEEEEeCCCe-----EEEEEecCCCccccceeEEeeeccc-ccccceEE
Confidence 777766544211111 111222222 345666766543 55555432 24554422211 01111222
Q ss_pred EEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 500 MFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 500 ~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
++...+.+++.||.+ ..+.+||..+..|..+.
T Consensus 256 v~~s~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 256 VAWGFNGLIASVGAD-----GVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEECTTSCEEEEETT-----SCEEEEEEETTEEEEEE
T ss_pred EEEcCCCEEEEEeCC-----CEEEEEEcCCCceEEEe
Confidence 222244566777743 36888898888887654
No 406
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=92.05 E-value=14 Score=39.06 Aligned_cols=205 Identities=7% Similarity=-0.047 Sum_probs=106.4
Q ss_pred eEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCC
Q 036185 290 HSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNI 368 (1057)
Q Consensus 290 hsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~ 368 (1057)
.+.+...+. +.+|+.+..+ ..+++||+.++ ...+.. +.. .-++++.. ++++|+....
T Consensus 31 eg~~~d~~g---~~l~~~~~~~--------~~i~~~~~~~~-~~~~~~---~~~-~~~~l~~~~dg~l~v~~~~------ 88 (296)
T 3e5z_A 31 EGPVYVPAR---SAVIFSDVRQ--------NRTWAWSDDGQ-LSPEMH---PSH-HQNGHCLNKQGHLIACSHG------ 88 (296)
T ss_dssp EEEEEEGGG---TEEEEEEGGG--------TEEEEEETTSC-EEEEES---SCS-SEEEEEECTTCCEEEEETT------
T ss_pred cCCeEeCCC---CEEEEEeCCC--------CEEEEEECCCC-eEEEEC---CCC-CcceeeECCCCcEEEEecC------
Confidence 444444333 4488877643 46899999988 666542 211 12233333 5677776432
Q ss_pred CCcEEEEECCCCcEEEeeccCC-CCCcccceEEEEECCEEEEE----cccCC--------CcccceEEEEECCCCcEEEe
Q 036185 369 LSDVWVFNMAKSKWTLLECSGS-VFQPRHRHAAAVIGSKIYVF----GGLNN--------DTIFSSLHVLDTDTLQWKEL 435 (1057)
Q Consensus 369 ~~~v~~yd~~t~~W~~~~~~g~-~p~~R~~hsa~~~~~~iyv~----GG~~~--------~~~~~~v~~yD~~t~~W~~~ 435 (1057)
...+++||+.+++...+..... .+..+....++.-++++|+. |.... ......++.||+. .+...+
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 1469999998888876642100 11111111222226778886 43210 1113479999988 666655
Q ss_pred ecCCCCCCCcceeEEEE-ECCEEEEEecCCCCcccCcEEEEECC-CCeE-EEeeccCCCCCCceeeEEEEE-CCEEEEEe
Q 036185 436 LINGEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGDLYTFDVH-ACLW-KKEDIAARSPHARFSHTMFLY-KNYLGLFG 511 (1057)
Q Consensus 436 ~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l~~yd~~-t~~W-~~v~~~~~~P~~R~~hs~~~~-~~~l~i~G 511 (1057)
... .. ...+++. -++++++.+.. .+.+++||+. +... ...... ...... -.+++.- ++.+|+..
T Consensus 168 ~~~--~~---~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~~-~~~~~~-p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 168 IRD--RV---KPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVHF-TVEPGK-TDGLRVDAGGLIWASA 235 (296)
T ss_dssp ECC--CS---SEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEEE-CCSSSC-CCSEEEBTTSCEEEEE
T ss_pred ecC--CC---CCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeEe-eCCCCC-CCeEEECCCCCEEEEc
Confidence 432 11 1122333 24555544332 2468999986 5555 221111 111111 1122222 67787765
Q ss_pred ccCCCCCCCeEEEEECCCCeEEEee
Q 036185 512 GCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 512 G~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
+ +.+++||++......+.
T Consensus 236 ~-------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 236 G-------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp T-------TEEEEECTTSCEEEEEE
T ss_pred C-------CeEEEECCCCCEEEEEE
Confidence 2 47999999876666665
No 407
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.01 E-value=5.7 Score=41.21 Aligned_cols=204 Identities=9% Similarity=-0.003 Sum_probs=100.7
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
+.+++||+.+............ .-++++.. ++.+|+... . +.+++||+.+.........+ . ..-+
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~~---~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~-~---~~p~ 111 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGLY---QPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDG-L---NYPE 111 (270)
T ss_dssp CEEEEECC-----EECCCCSCC---SCCCEEECTTCCEEEEET-T------TEEEEECTTCSCCEECCCCS-C---SSEE
T ss_pred CcEEEecCCCcccceEeeCCcC---CcceeEECCCCCEEEEcC-C------CEEEEEeCCCceEeeeecCC-c---CCCc
Confidence 4678899877665544321111 12334443 457888754 2 36899998877654442111 1 1122
Q ss_pred EEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEE
Q 036185 399 AAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFD 476 (1057)
Q Consensus 399 sa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd 476 (1057)
..++. ++++|+.... .+.+++||..+......... ... .-..++.. ++++|+.... .+.+.+||
T Consensus 112 ~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~~---~p~~i~~~~~g~l~v~~~~-----~~~i~~~~ 177 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT-GLN---DPDGVAVDNSGNVYVTDTD-----NNRVVKLE 177 (270)
T ss_dssp EEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC-SCC---SCCCEEECTTCCEEEEEGG-----GTEEEEEC
T ss_pred ceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc-cCC---CceeEEEeCCCCEEEEECC-----CCEEEEEe
Confidence 33333 5678886533 23588888776655443221 111 11223333 4678887543 24689999
Q ss_pred CCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE-eC
Q 036185 477 VHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV-VD 554 (1057)
Q Consensus 477 ~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~-~~ 554 (1057)
+.+........ ... ..-.+++.- ++.+|+... ..+.+++||+....-........ ... .+.+. -+
T Consensus 178 ~~~~~~~~~~~-~~~---~~p~~i~~d~~g~l~v~~~-----~~~~v~~~~~~~~~~~~~~~~~~---~~p-~~i~~~~~ 244 (270)
T 1rwi_B 178 AESNNQVVLPF-TDI---TAPWGIAVDEAGTVYVTEH-----NTNQVVKLLAGSTTSTVLPFTGL---NTP-LAVAVDSD 244 (270)
T ss_dssp TTTCCEEECCC-SSC---CSEEEEEECTTCCEEEEET-----TTSCEEEECTTCSCCEECCCCSC---SCE-EEEEECTT
T ss_pred cCCCceEeecc-cCC---CCceEEEECCCCCEEEEEC-----CCCcEEEEcCCCCcceeeccCCC---CCc-eeEEECCC
Confidence 88766443211 111 112233333 457877654 23468999987764333221110 111 22223 24
Q ss_pred CEEEEEeCCC
Q 036185 555 DDLIMIGGGA 564 (1057)
Q Consensus 555 ~~iyi~GGg~ 564 (1057)
+.+|+...++
T Consensus 245 g~l~v~~~~~ 254 (270)
T 1rwi_B 245 RTVYVADRGN 254 (270)
T ss_dssp CCEEEEEGGG
T ss_pred CCEEEEECCC
Confidence 6788876653
No 408
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=92.00 E-value=3.5 Score=45.53 Aligned_cols=149 Identities=13% Similarity=0.064 Sum_probs=75.9
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTL 430 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~ 430 (1057)
+++.++.|+.++ .+.++|+.+++-...- .+ .. ..-.+.++. +..+++.|+.++. +.+||+.+.
T Consensus 138 dg~~l~sgs~d~------~i~iwd~~~~~~~~~~-~~--h~-~~V~~~~~~~~~~~~l~s~s~D~~-----v~iwd~~~~ 202 (344)
T 4gqb_B 138 SGTQAVSGSKDI------CIKVWDLAQQVVLSSY-RA--HA-AQVTCVAASPHKDSVFLSCSEDNR-----ILLWDTRCP 202 (344)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE-CC--CS-SCEEEEEECSSCTTEEEEEETTSC-----EEEEETTSS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE-cC--cC-CceEEEEecCCCCCceeeeccccc-----ccccccccc
Confidence 556777777654 5889999887543321 11 00 111122222 2357777877653 888999877
Q ss_pred cEEEeecCCCCCCCcce-eEEEEE--CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--C-
Q 036185 431 QWKELLINGEGPCARHS-HSMLAY--GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--K- 504 (1057)
Q Consensus 431 ~W~~~~~~g~~P~~r~~-~s~~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~- 504 (1057)
+-...-.. ...... .+++.. ++++++.|+.++ .+..||+.+.+-...- .+ ....-.++.+ +
T Consensus 203 ~~~~~~~~---~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~~~~~~-~~----h~~~v~~v~fsp~g 269 (344)
T 4gqb_B 203 KPASQIGC---SAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTSCVLSS-AV----HSQCVTGLVFSPHS 269 (344)
T ss_dssp SCEEECC-------CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--CCEEE-EC----CSSCEEEEEECSSS
T ss_pred ceeeeeec---ceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCcEEEEE-cC----CCCCEEEEEEccCC
Confidence 64332110 111111 122222 456888887654 4788898765421110 01 1111122333 2
Q ss_pred CEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 505 NYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 505 ~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
..+++.|+.+ ..+.++|..+.+-..
T Consensus 270 ~~~lasgs~D-----~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 270 VPFLASLSED-----CSLAVLDSSLSELFR 294 (344)
T ss_dssp SCCEEEEETT-----SCEEEECTTCCEEEE
T ss_pred CeEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 3566777643 258888988876443
No 409
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=91.98 E-value=28 Score=42.40 Aligned_cols=115 Identities=12% Similarity=0.116 Sum_probs=67.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCCCCC--------ccccEEEEECCEEEEEcccCCCCCCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGSPSP--------RLGHTSSLIGDHMFIIGGRADPLNILSDV 372 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~P~~--------R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v 372 (1057)
+||+... .+.++.+|..+++ |+.-. ..+.. ....+.++.+++||+... ...+
T Consensus 72 ~vyv~~~---------~~~v~AlD~~tG~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------dg~l 133 (689)
T 1yiq_A 72 VMYTTGP---------FSVVYALDARDGRLIWKYDP--QSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------DGRL 133 (689)
T ss_dssp EEEEECG---------GGCEEEEETTTCCEEEEECC--CCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------TSEE
T ss_pred EEEEEcC---------CCeEEEEECCCCceeEEEcC--CCCccccccccccCCCCccEEECCEEEEEcc-------CCEE
Confidence 4888654 2468999998875 77532 11110 011234567888887542 2469
Q ss_pred EEEECCCCc--EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEe
Q 036185 373 WVFNMAKSK--WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKEL 435 (1057)
Q Consensus 373 ~~yd~~t~~--W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~ 435 (1057)
+.+|..|.+ |+.-.............+.++.++.+|+-.+......-..++.||..|++ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999998875 87654201111112233445678888874322112234579999999886 8765
No 410
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.84 E-value=5.3 Score=44.53 Aligned_cols=107 Identities=8% Similarity=0.064 Sum_probs=59.6
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
++..++.|+.++ .+.+||+.+..-...- ......-.+.+.. ++++++.|+.++ .+.+||+.+.+
T Consensus 108 ~~~~l~~~~~dg------~i~iwd~~~~~~~~~~----~~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 172 (420)
T 3vl1_A 108 QMRRFILGTTEG------DIKVLDSNFNLQREID----QAHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKDGS 172 (420)
T ss_dssp SSCEEEEEETTS------CEEEECTTSCEEEEET----TSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCC
T ss_pred CCCEEEEEECCC------CEEEEeCCCcceeeec----ccccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCc
Confidence 567788887654 6889998876543331 0111112222232 456777777654 48899987654
Q ss_pred EE-EeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEE
Q 036185 432 WK-ELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKK 484 (1057)
Q Consensus 432 W~-~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~ 484 (1057)
-. .+... ...-.++... ++..++.|+.++ .+..||+.+..-..
T Consensus 173 ~~~~~~~h-----~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 173 NPRTLIGH-----RATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTIH 217 (420)
T ss_dssp CCEEEECC-----SSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred CceEEcCC-----CCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCceeE
Confidence 22 22111 1112223333 456677777654 48889988776443
No 411
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.80 E-value=5.7 Score=43.76 Aligned_cols=186 Identities=10% Similarity=0.028 Sum_probs=99.2
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEEC--CEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIG--DHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~--~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
.+++.|+.++ .+.+||+.+.+....... ......-.+++... +..++.|+.++ .+.+||+.+.
T Consensus 87 ~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG--------DIILWDYDVQNKTSFIQG-MGPGDAITGMKFNQFNTNQLFVSSIRG------ATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS--------CEEEEETTSTTCEEEECC-CSTTCBEEEEEEETTEEEEEEEEETTT------EEEEEETTSC
T ss_pred CEEEEEcCCC--------eEEEEeCCCcccceeeec-CCcCCceeEEEeCCCCCCEEEEEeCCC------EEEEEECCCC
Confidence 4777777544 578899888776554311 01111222333333 36777776654 6889999987
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCE-E
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSR-L 457 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~-l 457 (1057)
....+... ......-.+.+.. ++..++.|+.++ .+..||+.......+... ...-.+++.. ++. +
T Consensus 152 ~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 152 VIQVFAKT--DSWDYWYCCVDVSVSRQMLATGDSTG-----RLLLLGLDGHEIFKEKLH-----KAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEECC--CCSSCCEEEEEEETTTTEEEEEETTS-----EEEEEETTSCEEEEEECS-----SSCEEEEEECSSCTTE
T ss_pred ceEEEecc--CCCCCCeEEEEECCCCCEEEEECCCC-----CEEEEECCCCEEEEeccC-----CCcEEEEEECCCCCCE
Confidence 76666421 1111112223333 556777777654 588899865544444321 1112222222 334 7
Q ss_pred EEEecCCCCcccCcEEEEECCC----CeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCC
Q 036185 458 YMFGGYNGEKALGDLYTFDVHA----CLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~t----~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
++.|+.++ .+..||+.+ ....... + ....-.++... ++..++.|+.+ ..+.+||+.+.
T Consensus 220 l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~--~---~~~~v~~~~~s~~~~~~l~~~~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 220 MATSSVDA-----TVKLWDLRNIKDKNSYIAEM--P---HEKPVNAAYFNPTDSTKLLTTDQR-----NEIRVYSSYDW 283 (383)
T ss_dssp EEEEETTS-----EEEEEEGGGCCSTTCEEEEE--E---CSSCEEEEEECTTTSCEEEEEESS-----SEEEEEETTBT
T ss_pred EEEEeCCC-----EEEEEeCCCCCcccceEEEe--c---CCCceEEEEEcCCCCCEEEEEcCC-----CcEEEEECCCC
Confidence 77777654 488889886 3333321 1 11111222222 45677777642 47889998764
No 412
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.79 E-value=18 Score=39.70 Aligned_cols=195 Identities=11% Similarity=-0.010 Sum_probs=95.6
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCc-------EEEeccCCCCCCccccEEEEE-C----C---EEEEEcccCCCCCC
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGT-------IKAIHTEGSPSPRLGHTSSLI-G----D---HMFIIGGRADPLNI 368 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~-------W~~l~~~~~P~~R~~hs~v~~-~----~---~Iyv~GG~~~~~~~ 368 (1057)
+++.||.++ .+.+||..+.. ...+. ....+ -.++... + + ..++.|+.++
T Consensus 28 ~l~s~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~--~h~~~--v~~~~~~~~~~~~g~~~~~l~s~~~dg---- 91 (397)
T 1sq9_A 28 FTVSCSGDG--------YLKVWDNKLLDNENPKDKSYSHF--VHKSG--LHHVDVLQAIERDAFELCLVATTSFSG---- 91 (397)
T ss_dssp EEEEEETTS--------EEEEEESBCCTTCCGGGGEEEEE--CCTTC--EEEEEEEEEEETTTEEEEEEEEEETTS----
T ss_pred eEEEEcCCC--------EEEEEECCCcccccCCCcceEEe--cCCCc--EEEEEEecccccCCccccEEEEEcCCC----
Confidence 777777543 57788887765 33333 11111 1222222 3 5 7777877654
Q ss_pred CCcEEEEECCCCc------EEEeeccCCCCC---cccceEEEEE-----CCEE-EEEcccCCCcccceEEEEECCC----
Q 036185 369 LSDVWVFNMAKSK------WTLLECSGSVFQ---PRHRHAAAVI-----GSKI-YVFGGLNNDTIFSSLHVLDTDT---- 429 (1057)
Q Consensus 369 ~~~v~~yd~~t~~------W~~~~~~g~~p~---~R~~hsa~~~-----~~~i-yv~GG~~~~~~~~~v~~yD~~t---- 429 (1057)
.+.+||..+.. +..+.. .+. ...-.+++.. ++.. ++.|+.++ .+..||+.+
T Consensus 92 --~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 92 --DLLFYRITREDETKKVIFEKLDL---LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFHPFADE 161 (397)
T ss_dssp --CEEEEEEEECTTTCCEEEEEECC---SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEESSSSH
T ss_pred --CEEEEEccCCcccccccceeecc---cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCCccccc
Confidence 58888887766 666641 111 1222233333 3455 77777664 377777665
Q ss_pred --Cc---EE---Eeec--CCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccC-CCCCCcee
Q 036185 430 --LQ---WK---ELLI--NGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAA-RSPHARFS 497 (1057)
Q Consensus 430 --~~---W~---~~~~--~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~-~~P~~R~~ 497 (1057)
.. |. .+.. .........-.++... ++ +++.|+.++ .+..||+.+......-... ..+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCCceeEEEeccccccccCCc
Confidence 21 11 1110 0000011112233333 45 666666543 5889999887654321110 01000111
Q ss_pred eEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 498 HTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 498 hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
-.++.+ ++.+++.|+.++ ....+.+||+.+.+-
T Consensus 236 i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~ 270 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGER 270 (397)
T ss_dssp EEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCE
T ss_pred cceEEECCCCCEEEEEecCC--CCceEEEEECCCCcc
Confidence 222333 566677776421 114789999987653
No 413
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.78 E-value=1.7 Score=48.19 Aligned_cols=175 Identities=13% Similarity=0.051 Sum_probs=86.9
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-C-CEEEEEcccCCCcccceEEEEECCCC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-G-SKIYVFGGLNNDTIFSSLHVLDTDTL 430 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~-~~iyv~GG~~~~~~~~~v~~yD~~t~ 430 (1057)
+++.++.|+.++ .+.+||..+.+-...- .+ .. ..-.+.++. + +.+++.||.++. +.+||+.+.
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~-~~--h~-~~v~~v~~s~~~~~~~~s~~~dg~-----v~~wd~~~~ 214 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSY-NA--HS-SEVNCVAACPGKDTIFLSCGEDGR-----ILLWDTRKP 214 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEE-CC--CS-SCEEEEEECTTCSSCEEEEETTSC-----EEECCTTSS
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEE-cC--CC-CCEEEEEEccCCCceeeeeccCCc-----eEEEECCCC
Confidence 456777777654 5889999887643332 01 01 111122222 2 347777776653 778888776
Q ss_pred cEEEeecCCCCCCCcceeEEEEE--CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE---CC
Q 036185 431 QWKELLINGEGPCARHSHSMLAY--GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY---KN 505 (1057)
Q Consensus 431 ~W~~~~~~g~~P~~r~~~s~~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~---~~ 505 (1057)
+....... ........+++.. ++.+++.|+.++ .+..||+.+..-... .. .......++.+ +.
T Consensus 215 ~~~~~~~~--~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd~~~~~~~~~--~~---~~~~~v~~l~~sp~~~ 282 (357)
T 4g56_B 215 KPATRIDF--CASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVNIKNPDSAQT--SA---VHSQNITGLAYSYHSS 282 (357)
T ss_dssp SCBCBCCC--TTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEESSCGGGCEE--EC---CCSSCEEEEEECSSSS
T ss_pred ceeeeeee--ccccccccchhhhhcccceEEEeeccc-----ceeEEECCCCcEeEE--Ee---ccceeEEEEEEcCCCC
Confidence 53322111 0111111222222 356777877654 478889876542211 01 01111122233 33
Q ss_pred EEEEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE--eCCEEEEEeCCC
Q 036185 506 YLGLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV--VDDDLIMIGGGA 564 (1057)
Q Consensus 506 ~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~--~~~~iyi~GGg~ 564 (1057)
.+++.|+.+ ..+.+||+.+.+..... . ...... +++. .++.+++.||.+
T Consensus 283 ~~lasgs~D-----~~i~iwd~~~~~~~~~~--~--H~~~V~-~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 283 PFLASISED-----CTVAVLDADFSEVFRDL--S--HRDFVT-GVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CCEEEEETT-----SCEEEECTTSCEEEEEC--C--CSSCEE-EEEECSSSTTEEEEEETT
T ss_pred CEEEEEeCC-----CEEEEEECCCCcEeEEC--C--CCCCEE-EEEEeCCCCCEEEEEcCC
Confidence 566677643 25888999887654432 1 111111 2222 246677777754
No 414
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.74 E-value=9.2 Score=43.03 Aligned_cols=147 Identities=8% Similarity=0.025 Sum_probs=76.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++.||.++ .+.++|..+++....- ..... .-.+++.. ++.+++.||.++ .+.+||+.+.
T Consensus 120 ~~~l~s~s~Dg--------~i~vwd~~~~~~~~~l--~~h~~-~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~ 182 (410)
T 1vyh_C 120 FSVMVSASEDA--------TIKVWDYETGDFERTL--KGHTD-SVQDISFDHSGKLLASCSADM------TIKLWDFQGF 182 (410)
T ss_dssp SSEEEEEESSS--------CEEEEETTTCCCCEEE--CCCSS-CEEEEEECTTSSEEEEEETTS------CCCEEETTSS
T ss_pred CCEEEEEeCCC--------eEEEEECCCCcEEEEE--eccCC-cEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCC
Confidence 35788887654 5778888776543221 11111 11122222 456777887764 4677888765
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRL 457 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~l 457 (1057)
.-... +......-.++.+ ++..++.|+.++ .+..||+.+......-. + .. ..-.++.. .++.+
T Consensus 183 ~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~~~~~~~-~--h~-~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 183 ECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGYCVKTFT-G--HR-EWVRMVRPNQDGTL 248 (410)
T ss_dssp CEEEC-----CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEEEEEE-C--CS-SCEEEEEECTTSSE
T ss_pred ceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEe-C--CC-ccEEEEEECCCCCE
Confidence 43221 1111111222222 456677777654 48889998876433211 1 01 11111222 24567
Q ss_pred EEEecCCCCcccCcEEEEECCCCeEEE
Q 036185 458 YMFGGYNGEKALGDLYTFDVHACLWKK 484 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~t~~W~~ 484 (1057)
++.|+.++ .+..||+.+.....
T Consensus 249 l~s~s~D~-----~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 249 IASCSNDQ-----TVRVWVVATKECKA 270 (410)
T ss_dssp EEEEETTS-----CEEEEETTTCCEEE
T ss_pred EEEEcCCC-----eEEEEECCCCceee
Confidence 77777664 47888887766543
No 415
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.71 E-value=1.8 Score=47.61 Aligned_cols=184 Identities=8% Similarity=0.022 Sum_probs=94.2
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
++.+++.||.++ .+.+||..++.|........ .....-.+.+.. +++.++.|+.++. +.+||..+..
T Consensus 27 ~g~~las~~~D~------~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~~-----v~iw~~~~~~ 94 (345)
T 3fm0_A 27 AGTLLASCGGDR------RIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDAT-----TCIWKKNQDD 94 (345)
T ss_dssp TSSCEEEEETTS------CEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECCC-
T ss_pred CCCEEEEEcCCC------eEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCCc-----EEEEEccCCC
Confidence 456777777654 58888988888764431100 011111122222 5667778877654 6778887777
Q ss_pred EEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCC-eEEEeeccCCCCCCceeeEEEEE--CCEE
Q 036185 432 WKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHAC-LWKKEDIAARSPHARFSHTMFLY--KNYL 507 (1057)
Q Consensus 432 W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~-~W~~v~~~~~~P~~R~~hs~~~~--~~~l 507 (1057)
+..+...... ...-.+++.. ++++++.|+.++ .+..||+.+. .+..+....... ....++.+ ++.+
T Consensus 95 ~~~~~~~~~h--~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 95 FECVTTLEGH--ENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSVLNSHT---QDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEEECCCC---SCEEEEEECSSSSC
T ss_pred eEEEEEccCC--CCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEEecCcC---CCeEEEEECCCCCE
Confidence 6554432110 1111222222 466778887764 3778887654 233222111111 11122233 4567
Q ss_pred EEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCC
Q 036185 508 GLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 508 ~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
++.|+.+ ..+.+||..+..|..+..... ........+...+++.++.|+.+
T Consensus 165 l~s~s~d-----~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 165 LASASYD-----DTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEEEETT-----SCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEeCC-----CcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCCEEEEEeCC
Confidence 7777743 358889988888875542211 11111122222356667777654
No 416
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.63 E-value=13 Score=38.83 Aligned_cols=182 Identities=7% Similarity=0.070 Sum_probs=93.3
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcc-cceEEEEE--CCEEEEEcccCCCcccceEEEEECCC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPR-HRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDT 429 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R-~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t 429 (1057)
++.+|+.+..+ ..+.+||+.......+...+..+... .-+..++. ++++|+.+... ...+.+||...
T Consensus 40 ~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g 109 (286)
T 1q7f_A 40 QNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYG 109 (286)
T ss_dssp TCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCC
Confidence 45777775432 36889998755444443222111111 22333442 57888876321 24588999554
Q ss_pred CcEEEeecCCCCCCCcceeEEEE-ECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEE
Q 036185 430 LQWKELLINGEGPCARHSHSMLA-YGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYL 507 (1057)
Q Consensus 430 ~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l 507 (1057)
.....+.. +....-+.++. -++++|+....+ +.+++||+.......+...+....+ .+++.- ++.+
T Consensus 110 ~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p---~~i~~~~~g~l 177 (286)
T 1q7f_A 110 QFVRKFGA----TILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFP---NGVVVNDKQEI 177 (286)
T ss_dssp CEEEEECT----TTCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSE---EEEEECSSSEE
T ss_pred cEEEEecC----ccCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCc---EEEEECCCCCE
Confidence 44333322 11111233333 256788875432 4689999876655544222221111 233333 5788
Q ss_pred EEEeccCCCCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEE-eCCEEEEEeCCC
Q 036185 508 GLFGGCPVRQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANV-VDDDLIMIGGGA 564 (1057)
Q Consensus 508 ~i~GG~~~~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~-~~~~iyi~GGg~ 564 (1057)
|+.+. ..+.+++||+.......+....... .. .+.+. -++.+|+...+.
T Consensus 178 ~v~~~-----~~~~i~~~~~~g~~~~~~~~~g~~~--~p-~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 178 FISDN-----RAHCVKVFNYEGQYLRQIGGEGITN--YP-IGVGINSNGEILIADNHN 227 (286)
T ss_dssp EEEEG-----GGTEEEEEETTCCEEEEESCTTTSC--SE-EEEEECTTCCEEEEECSS
T ss_pred EEEEC-----CCCEEEEEcCCCCEEEEEccCCccC--CC-cEEEECCCCCEEEEeCCC
Confidence 88764 2457999999776555553221111 11 22333 356888877543
No 417
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.55 E-value=1.8 Score=52.94 Aligned_cols=211 Identities=12% Similarity=0.062 Sum_probs=103.6
Q ss_pred EEEEEccc-CCCCCCcccccEEEEeCCCCcEEEeccCCCCCC--------------c------c-ccEEEE-ECCEEEEE
Q 036185 303 QILVFGGF-GGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSP--------------R------L-GHTSSL-IGDHMFII 359 (1057)
Q Consensus 303 ~lyvfGG~-~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~--------------R------~-~hs~v~-~~~~Iyv~ 359 (1057)
+.+++++. ++ ......++.+|+.+++...+.......+ | . -.+.+. -+++.+++
T Consensus 49 ~~la~~~~~d~---~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 49 SRVTFLRGKDS---DRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp SEEEEEECCSS---CTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred CEEEEEeccCC---CCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 45555554 32 1224589999999988776642210000 0 0 112222 24454455
Q ss_pred cccCCCCCCCCcEEEEECCCC---cEEEeeccCCCCCcccceEEEE-ECCEEEEEcccCCCcccceEEEEECCCCcEEEe
Q 036185 360 GGRADPLNILSDVWVFNMAKS---KWTLLECSGSVFQPRHRHAAAV-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKEL 435 (1057)
Q Consensus 360 GG~~~~~~~~~~v~~yd~~t~---~W~~~~~~g~~p~~R~~hsa~~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~ 435 (1057)
++. ..++++|..++ .-..+.. ....-...+. -+++.++++.. +.++++|+.+.+...+
T Consensus 126 ~~~-------~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 126 PLG-------GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQL 187 (741)
T ss_dssp EET-------TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEEC
T ss_pred EeC-------CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEe
Confidence 443 68999999887 4433321 1111112222 25554455432 2699999999887776
Q ss_pred ecCCCCCC-------------CcceeEEEEECCEEEEEecCCCC----------------------------cccCcEEE
Q 036185 436 LINGEGPC-------------ARHSHSMLAYGSRLYMFGGYNGE----------------------------KALGDLYT 474 (1057)
Q Consensus 436 ~~~g~~P~-------------~r~~~s~~~~~~~lyv~GG~~~~----------------------------~~~~~l~~ 474 (1057)
...+..+. .+.......-+++.++++..++. .....++.
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 54321100 00111122224444444433221 11237888
Q ss_pred EECCC-CeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 475 FDVHA-CLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 475 yd~~t-~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
+|+.+ ..-..+... ..........+. -+++.++++..+......+++++|+.+.+...+.
T Consensus 268 ~d~~~~~~~~~~~~~-~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLG-KEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp ECSSTTCCCEEECCC-SCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EECCCCCceEEecCC-CCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 99888 765554211 001111122223 4444444444333334568999999998877664
No 418
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.45 E-value=4.3 Score=42.14 Aligned_cols=187 Identities=9% Similarity=0.061 Sum_probs=98.9
Q ss_pred ccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC-CcEEEeeccCCCCCcc
Q 036185 318 RRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK-SKWTLLECSGSVFQPR 395 (1057)
Q Consensus 318 ~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~R 395 (1057)
....++.+|+.+++...+... ...-.+++.. +++.+++++ + ..+++||+.+ .....+.. .+...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~-~------~~i~~~d~~~~~~~~~~~~---~~~~~ 85 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQT----PELFEAPNWSPDGKYLLLNS-E------GLLYRLSLAGDPSPEKVDT---GFATI 85 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEE----SSCCEEEEECTTSSEEEEEE-T------TEEEEEESSSCCSCEECCC---TTCCC
T ss_pred cceeEEEEeCCCCceeeeccC----CcceEeeEECCCCCEEEEEc-C------CeEEEEeCCCCCCceEecc---ccccc
Confidence 346789999998887765421 1112223322 455555554 1 3799999998 77665531 11111
Q ss_pred cceEEEE-ECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC-EEEEEecCCCCcccCcE
Q 036185 396 HRHAAAV-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GS-RLYMFGGYNGEKALGDL 472 (1057)
Q Consensus 396 ~~hsa~~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~-~lyv~GG~~~~~~~~~l 472 (1057)
.-.+.+. -+++.+++++.... ....+|.+|..+.....+... .. ...+... ++ .+++.++.++. ..+
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~----~~--~~~~~~spdg~~l~~~~~~~~~---~~l 155 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKN----LP--SYWHGWSPDGKSFTYCGIRDQV---FDI 155 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSS----SS--EEEEEECTTSSEEEEEEEETTE---EEE
T ss_pred cccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeecC----CC--ccceEECCCCCEEEEEECCCCc---eEE
Confidence 1122222 25555566553322 346789999888776655432 11 2222222 34 45545544332 368
Q ss_pred EEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 473 YTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 473 ~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
|.+|+.+.....+.. .+ .. .....+ ++..+++++.. .....+|.+++.......+.
T Consensus 156 ~~~~~~~~~~~~~~~---~~-~~--~~~~~~s~dg~~l~~~~~~--~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 156 YSMDIDSGVETRLTH---GE-GR--NDGPDYSPDGRWIYFNSSR--TGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EEEETTTCCEEECCC---SS-SC--EEEEEECTTSSEEEEEECT--TSSCEEEEEETTSSCEEECC
T ss_pred EEEECCCCcceEccc---CC-Cc--cccceECCCCCEEEEEecC--CCCccEEEECCCCCCcEEEe
Confidence 888888777665421 11 11 122223 44444444321 12458999998887776654
No 419
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.43 E-value=26 Score=42.50 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=67.0
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCCCCC--------ccccEEEEECCEEEEEcccCCCCCCCCcE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGSPSP--------RLGHTSSLIGDHMFIIGGRADPLNILSDV 372 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~P~~--------R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v 372 (1057)
.||+... .+.++.+|..+++ |+.-. ..+.. ....+.++.+++||+... ...+
T Consensus 68 ~vyv~~~---------~~~v~AlD~~tG~~~W~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------dg~l 129 (668)
T 1kv9_A 68 VIYTSMS---------WSRVIAVDAASGKELWRYDP--EVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------DGRL 129 (668)
T ss_dssp EEEEEEG---------GGEEEEEETTTCCEEEEECC--CCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------TSEE
T ss_pred EEEEECC---------CCeEEEEECCCChhceEECC--CCCccccccccccCCccceEEECCEEEEEcC-------CCEE
Confidence 4887654 2468999998875 77532 11110 011234556888887532 1469
Q ss_pred EEEECCCCc--EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEee
Q 036185 373 WVFNMAKSK--WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELL 436 (1057)
Q Consensus 373 ~~yd~~t~~--W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~ 436 (1057)
+.+|..|.+ |+.-... .........+.++.++.+|+-.+.........++.||+.+++ |+.-.
T Consensus 130 ~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp EEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred EEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 999998875 8764311 111112233445678888874332212234579999998875 87653
No 420
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=91.39 E-value=8.5 Score=46.59 Aligned_cols=156 Identities=12% Similarity=0.083 Sum_probs=82.5
Q ss_pred CCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCC-cEEEeecCCCCC-CC
Q 036185 369 LSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTL-QWKELLINGEGP-CA 444 (1057)
Q Consensus 369 ~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~-~W~~~~~~g~~P-~~ 444 (1057)
...++++|+.+.....+.. ..........+.+ +++.++++..+.......++.+|+.+. .+..+....... ..
T Consensus 234 ~~~l~~~d~~~~~~~~~~~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQT---GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEEETTTTEEEECCC---CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eeEEEEEECCCCceEeecc---CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 3579999999887655531 1111112222222 555555555444444568999999998 776664311100 00
Q ss_pred cceeEEEEE--CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CC-EEEEEeccCCCCCC
Q 036185 445 RHSHSMLAY--GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KN-YLGLFGGCPVRQNY 519 (1057)
Q Consensus 445 r~~~s~~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~-~l~i~GG~~~~~~~ 519 (1057)
........- ++++++.+..++ ...+|.+|........+.. + ... ..+...+ ++ .|++.+. ......
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~-~--~~~--v~~~~~~spdg~~l~~~~~-~~~~~~ 381 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTK-G--EWE--VTNFAGFDPKGTRLYFEST-EASPLE 381 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCC-S--SSC--EEEEEEECTTSSEEEEEES-SSCTTC
T ss_pred ccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCC-C--CeE--EEeeeEEcCCCCEEEEEec-CCCCce
Confidence 001112222 667655554443 4679999987777766521 1 111 1122233 34 4555544 222224
Q ss_pred CeEEEEECCCCeEEEee
Q 036185 520 QELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 520 ~~i~~yd~~~~~W~~v~ 536 (1057)
..+|.+|+.+...+.+.
T Consensus 382 ~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 382 RHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp BEEEEEETTCCCCEESC
T ss_pred EEEEEEEcCCCCceecc
Confidence 58999999888766654
No 421
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.38 E-value=8.6 Score=42.32 Aligned_cols=204 Identities=9% Similarity=0.024 Sum_probs=96.1
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc------EEEeccCCCCC-CccccEEEEE-----CCEE-EEEcccCCCCCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT------IKAIHTEGSPS-PRLGHTSSLI-----GDHM-FIIGGRADPLNIL 369 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~------W~~l~~~~~P~-~R~~hs~v~~-----~~~I-yv~GG~~~~~~~~ 369 (1057)
.+++.|+.++ .+.+||+.+.. +..+....... ...-.++... ++.. ++.|+.++
T Consensus 82 ~~l~s~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg----- 148 (397)
T 1sq9_A 82 CLVATTSFSG--------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG----- 148 (397)
T ss_dssp EEEEEEETTS--------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----
T ss_pred cEEEEEcCCC--------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----
Confidence 5777777543 47778877766 66664211110 0112223333 3455 77777654
Q ss_pred CcEEEEECCC------Cc---EE---Eeec--cCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEE
Q 036185 370 SDVWVFNMAK------SK---WT---LLEC--SGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKE 434 (1057)
Q Consensus 370 ~~v~~yd~~t------~~---W~---~~~~--~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~ 434 (1057)
.+.+||..+ .. |. .+.. .........-.+++.. ++ +++.|+.++ .+.+||+.+.+...
T Consensus 149 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 149 -TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG-----TVQISELSTLRPLY 221 (397)
T ss_dssp -CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS-----EEEEEETTTTEEEE
T ss_pred -cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC-----cEEEEECCCCceeE
Confidence 578888765 22 21 1110 0000111112233333 45 666666544 48899998775433
Q ss_pred eecCC--CCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCC--------CceeeEEEEE
Q 036185 435 LLING--EGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPH--------ARFSHTMFLY 503 (1057)
Q Consensus 435 ~~~~g--~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~--------~R~~hs~~~~ 503 (1057)
.-... ..+....-.+++.. ++.+++.|+.++ ....+..||+.+..-...-.....+. ....-..+.+
T Consensus 222 ~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 222 NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp EEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE
T ss_pred EEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEE
Confidence 32210 00001112222222 456777776541 11358899988765333211100000 1111222333
Q ss_pred --CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 504 --KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 504 --~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
++.+++.|+. ...+.+||+.+.+-.
T Consensus 300 ~~~~~~l~~~~~-----dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 300 NDSGETLCSAGW-----DGKLRFWDVKTKERI 326 (397)
T ss_dssp CSSSSEEEEEET-----TSEEEEEETTTTEEE
T ss_pred CCCCCEEEEEeC-----CCeEEEEEcCCCcee
Confidence 4667777763 237999999887543
No 422
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=91.37 E-value=22 Score=40.07 Aligned_cols=215 Identities=12% Similarity=0.032 Sum_probs=107.6
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccc-cEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcE
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLG-HTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKW 382 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~-hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W 382 (1057)
+++.|+.++ .+.++|..+.+-...- ...... .+++...+..++.|+.++ .+.+||+.+..-
T Consensus 134 ~l~sgs~dg--------~i~vwd~~~~~~~~~~----~~h~~~V~~l~~~~~~~l~s~s~dg------~i~vwd~~~~~~ 195 (464)
T 3v7d_B 134 YVITGADDK--------MIRVYDSINKKFLLQL----SGHDGGVWALKYAHGGILVSGSTDR------TVRVWDIKKGCC 195 (464)
T ss_dssp EEEEEETTS--------CEEEEETTTTEEEEEE----CCCSSCEEEEEECSTTEEEEEETTS------CEEEEETTTTEE
T ss_pred EEEEEcCCC--------cEEEEECCCCcEEEEE----eCCCcCEEEEEEcCCCEEEEEeCCC------CEEEEECCCCcE
Confidence 777777554 5788888776533221 111111 222233334677777654 689999988764
Q ss_pred EEeeccCCCCCcccceEEEEE---CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCC-C-----------------C
Q 036185 383 TLLECSGSVFQPRHRHAAAVI---GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLING-E-----------------G 441 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~~---~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g-~-----------------~ 441 (1057)
...- .+ .. ..-.+.... ++..++.|+.++. +..||+.+..-....... . .
T Consensus 196 ~~~~-~~-h~--~~v~~l~~~~~~~~~~l~s~s~d~~-----i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 196 THVF-EG-HN--STVRCLDIVEYKNIKYIVTGSRDNT-----LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEEE-CC-CS--SCEEEEEEEESSSCEEEEEEETTSC-----EEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEEE-CC-CC--CccEEEEEecCCCCCEEEEEcCCCc-----EEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 3322 11 11 111122222 4577778877653 777887665421110000 0 0
Q ss_pred CCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCC
Q 036185 442 PCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQ 520 (1057)
Q Consensus 442 P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~ 520 (1057)
.........+..++..++.|+.++ .+..||+.+..-...-. + . ...-.+++.. ++..++.|+.+ .
T Consensus 267 ~~~~~~v~~~~~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~-~--~-~~~v~~~~~~~~~~~l~sg~~d-----g 332 (464)
T 3v7d_B 267 RGHMASVRTVSGHGNIVVSGSYDN-----TLIVWDVAQMKCLYILS-G--H-TDRIYSTIYDHERKRCISASMD-----T 332 (464)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTTEEEEEEC-C--C-SSCEEEEEEETTTTEEEEEETT-----S
T ss_pred cCccceEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcEEEEec-C--C-CCCEEEEEEcCCCCEEEEEeCC-----C
Confidence 000111122234455677777654 48899998776543211 1 1 1112223333 45666777743 3
Q ss_pred eEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCC
Q 036185 521 ELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 521 ~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
.+.+||+.+.+-...-. .. ...-.+...++..++.|+.+
T Consensus 333 ~i~vwd~~~~~~~~~~~--~h---~~~v~~~~~~~~~l~s~s~d 371 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQ--GH---TALVGLLRLSDKFLVSAAAD 371 (464)
T ss_dssp CEEEEETTTTEEEEEEC--CC---SSCEEEEEECSSEEEEEETT
T ss_pred cEEEEECCCCcEEEEEe--CC---CCcEEEEEEcCCEEEEEeCC
Confidence 68999998875433211 11 11123444566777777654
No 423
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.26 E-value=9.2 Score=40.71 Aligned_cols=213 Identities=10% Similarity=0.006 Sum_probs=106.5
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCCCCCccccEEEE-ECCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGSPSPRLGHTSSL-IGDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
+.+++.|..+ +.++.+|+.+++ |+.-. +.....|.+.. -++++|+.+ .+.++.||+
T Consensus 5 ~~~lv~~~~~--------~~v~~~d~~tG~~~w~~~~----~~~~~~~~~~~~pdG~ilvs~--------~~~V~~~d~- 63 (276)
T 3no2_A 5 QHLLVGGSGW--------NKIAIINKDTKEIVWEYPL----EKGWECNSVAATKAGEILFSY--------SKGAKMITR- 63 (276)
T ss_dssp CEEEEECTTC--------SEEEEEETTTTEEEEEEEC----CTTCCCCEEEECTTSCEEEEC--------BSEEEEECT-
T ss_pred CcEEEeeCCC--------CEEEEEECCCCeEEEEeCC----CccCCCcCeEECCCCCEEEeC--------CCCEEEECC-
Confidence 4577776533 468899997776 65422 11112344444 367787732 135899998
Q ss_pred CCc--EEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCC-cEEEeecCC-CCCCCcceeEEEEE
Q 036185 379 KSK--WTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTL-QWKELLING-EGPCARHSHSMLAY 453 (1057)
Q Consensus 379 t~~--W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~-~W~~~~~~g-~~P~~r~~~s~~~~ 453 (1057)
+.+ |+.-. +....-+++... ++++++....+ ...++.+|+... .|+.....+ ..+...........
T Consensus 64 ~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 64 DGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp TSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT
T ss_pred CCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC
Confidence 443 65432 111123344443 56666654321 235788887443 244332211 01111111222334
Q ss_pred CCEEEEEecCCCCcccCcEEEEECCCC-eEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCe
Q 036185 454 GSRLYMFGGYNGEKALGDLYTFDVHAC-LWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 454 ~~~lyv~GG~~~~~~~~~l~~yd~~t~-~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
++.+++.... -..+..||++.+ .|+.-. +..| +++... ++.+++.+.. ...+..+|+++.+
T Consensus 135 ~G~~lv~~~~-----~~~v~~~d~~G~~~w~~~~--~~~~-----~~~~~~~~g~~~v~~~~-----~~~v~~~d~~tG~ 197 (276)
T 3no2_A 135 KGNYLVPLFA-----TSEVREIAPNGQLLNSVKL--SGTP-----FSSAFLDNGDCLVACGD-----AHCFVQLNLESNR 197 (276)
T ss_dssp TSCEEEEETT-----TTEEEEECTTSCEEEEEEC--SSCC-----CEEEECTTSCEEEECBT-----TSEEEEECTTTCC
T ss_pred CCCEEEEecC-----CCEEEEECCCCCEEEEEEC--CCCc-----cceeEcCCCCEEEEeCC-----CCeEEEEeCcCCc
Confidence 5566655432 245899998833 376531 1111 233434 6777777653 2469999999654
Q ss_pred --EEEeeccCCC-CCcccceEEEEeCCEEEEEe
Q 036185 532 --WKHLKLNYVC-KELFVRSTANVVDDDLIMIG 561 (1057)
Q Consensus 532 --W~~v~~~~~~-~~~~~~~~a~~~~~~iyi~G 561 (1057)
|+.-.....+ +.......+...++.+|+..
T Consensus 198 ~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 198 IVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 5553221111 11112223333477888876
No 424
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=91.11 E-value=6.3 Score=47.76 Aligned_cols=198 Identities=9% Similarity=-0.004 Sum_probs=99.7
Q ss_pred ccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC-cEEEeeccCCCC-Cc
Q 036185 318 RRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS-KWTLLECSGSVF-QP 394 (1057)
Q Consensus 318 ~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~-~W~~~~~~g~~p-~~ 394 (1057)
....++++|+.+++...+... .+....-..++.. +++.++++..+. ......++++|+.+. .+..+....... ..
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTG-EPKEKFLTNLSWSPDENILYVAEVNR-AQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCC-SCTTCEEEEEEECTTSSEEEEEEECT-TSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccC-CCCceeEeeEEEECCCCEEEEEEeCC-CCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 346799999998876655321 1111111222222 444344443332 123458999999998 676654211100 00
Q ss_pred ccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECC-EEEEEecCCCCcccCc
Q 036185 395 RHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS-RLYMFGGYNGEKALGD 471 (1057)
Q Consensus 395 R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~-~lyv~GG~~~~~~~~~ 471 (1057)
.....+..- ++++++.+..++ ...+|.+|........+... ...........-++ .||+.+.. .......
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~-~~~~~~~ 383 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKG---EWEVTNFAGFDPKGTRLYFESTE-ASPLERH 383 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCS---SSCEEEEEEECTTSSEEEEEESS-SCTTCBE
T ss_pred ccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCC---CeEEEeeeEEcCCCCEEEEEecC-CCCceEE
Confidence 001112222 667555554433 35688889777767766431 11111111111234 45555443 3223457
Q ss_pred EEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCe
Q 036185 472 LYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 472 l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+|.+|+.+.....+.. .. ..++.+.- +++.+++...+ .....+++++|+.+.+
T Consensus 384 l~~~d~~~~~~~~l~~-----~~-~~~~~~~spdg~~l~~~~~~-~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 384 FYCIDIKGGKTKDLTP-----ES-GMHRTQLSPDGSAIIDIFQS-PTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEETTCCCCEESCC-----SS-SEEEEEECTTSSEEEEEEEC-SSCSCEEEEEESSSCE
T ss_pred EEEEEcCCCCceeccC-----CC-ceEEEEECCCCCEEEEEecC-CCCCcEEEEEECCCCe
Confidence 9999998877665521 11 12332222 45555555422 2334579999998887
No 425
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.10 E-value=8.6 Score=41.09 Aligned_cols=188 Identities=14% Similarity=0.126 Sum_probs=91.8
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
+.+++.|+.++ .+..++........... ..............+..++.|+.++ .+..||.....
T Consensus 98 g~~l~s~~~d~--------~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~s~s~d~------~~~~~d~~~~~ 161 (340)
T 4aow_A 98 GQFALSGSWDG--------TLRLWDLTTGTTTRRFV--GHTKDVLSVAFSSDNRQIVSGSRDK------TIKLWNTLGVC 161 (340)
T ss_dssp SSEEEEEETTS--------EEEEEETTTTEEEEEEE--CCSSCEEEEEECTTSSCEEEEETTS------CEEEECTTSCE
T ss_pred CCEEEEEcccc--------cceEEeecccceeeeec--CCCCceeEEEEeecCccceeecCCC------eEEEEEeCCCc
Confidence 35677777554 35667776655444321 1111111112222445666666544 46677766544
Q ss_pred EEEeeccCCCCCcccceEEEEE----CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI----GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSR 456 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~----~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~ 456 (1057)
-...... ........+.+ .+.+++.||.++ .+..||..+.+....-.. . ...-.+++. -+++
T Consensus 162 ~~~~~~~----~~~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~~~---h-~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 162 KYTVQDE----SHSEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNHIG---H-TGYLNTVTVSPDGS 228 (340)
T ss_dssp EEEECSS----SCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEECC---C-SSCEEEEEECTTSS
T ss_pred eEEEEec----cccCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEecC---C-CCcEEEEEECCCCC
Confidence 3332211 11111122222 234666666654 378899888765443221 1 111122222 2466
Q ss_pred EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
+++.|+.++ .+..||+.+..-....... ..-.++....+..++.++.+ ..+.+||+.+..-.
T Consensus 229 ~l~s~s~Dg-----~i~iwd~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 229 LCASGGKDG-----QAMLWDLNEGKHLYTLDGG-----DIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIV 290 (340)
T ss_dssp EEEEEETTC-----EEEEEETTTTEEEEEEECS-----SCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEE
T ss_pred EEEEEeCCC-----eEEEEEeccCceeeeecCC-----ceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEE
Confidence 778887764 4788898876543321111 11122233344445556532 36888898876543
No 426
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=90.99 E-value=20 Score=38.79 Aligned_cols=226 Identities=13% Similarity=0.068 Sum_probs=115.4
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC--cEEEeeccC---CCCC
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS--KWTLLECSG---SVFQ 393 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~--~W~~~~~~g---~~p~ 393 (1057)
+.++++|+.+++....... .. -..-+.+++. ++.+|+....+ ..+.+||+... .-..+...+ ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~-~~-~~~p~gia~d~~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK-NL-FYLPHGLSIDTDGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp CCEEEECTTTCCEEEEECT-TT-CSSEEEEEECTTSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred CcEEEEECCCCeEEeccCC-Cc-cCCceEEEECCCCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 4799999988876543211 11 1112233333 56788875432 46999998765 222222111 1111
Q ss_pred cccceEEEEE---CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCC----CCCc-ceeEEEEE-C-CEEEEEecC
Q 036185 394 PRHRHAAAVI---GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEG----PCAR-HSHSMLAY-G-SRLYMFGGY 463 (1057)
Q Consensus 394 ~R~~hsa~~~---~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~----P~~r-~~~s~~~~-~-~~lyv~GG~ 463 (1057)
.......+.+ ++.+|+..++. .+.+.+||+.......+...+.- +... .-+.+++. + +.||+....
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 1112233333 56799987532 23588999655444444322211 1111 12344443 3 789998654
Q ss_pred CCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccC--CCCCCCeEEEEECCCCeEEEeeccCCC
Q 036185 464 NGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCP--VRQNYQELSLLDLQLHIWKHLKLNYVC 541 (1057)
Q Consensus 464 ~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~--~~~~~~~i~~yd~~~~~W~~v~~~~~~ 541 (1057)
+ +.+.+||+.+.++...-... .......+.+...+.+|...|.. .......++++|+.+.+....-.....
T Consensus 217 ~-----~~I~~~~~~~G~~~~~~~~~--~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 217 N-----GRIQCFKTDTKEFVREIKHA--SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK 289 (329)
T ss_dssp T-----TEEEEEETTTCCEEEEECCT--TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSS
T ss_pred C-----CEEEEEECCCCcEEEEEecc--ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCC
Confidence 3 46999999877665432111 11112223344457777777732 223355899999888876554211111
Q ss_pred CCcccceEEEE-eCCEEEEEeCCCc
Q 036185 542 KELFVRSTANV-VDDDLIMIGGGAA 565 (1057)
Q Consensus 542 ~~~~~~~~a~~-~~~~iyi~GGg~~ 565 (1057)
..... .+.++ -++.+|+...++.
T Consensus 290 ~~~~p-~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 290 HFDMP-HDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp CCSSE-EEEEECTTSEEEEEESSSC
T ss_pred ccCCe-eEEEECCCCCEEEEECCCC
Confidence 11111 23333 3568888876543
No 427
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.85 E-value=10 Score=41.65 Aligned_cols=192 Identities=6% Similarity=-0.067 Sum_probs=94.8
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEE-EECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSS-LIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v-~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
..+|.+|+.+++...+... + ........ .-+++.+++.... ..++++|+.+..-..+... +..
T Consensus 60 ~~l~~~d~~~~~~~~l~~~--~-~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~~~~~~~~~~---~~~---- 123 (396)
T 3c5m_A 60 RNYYLLNLETQQAVQLTEG--K-GDNTFGGFISTDERAFFYVKNE------LNLMKVDLETLEEQVIYTV---DEE---- 123 (396)
T ss_dssp CEEEEEETTTTEEEECCCS--S-CBCTTTCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEEEC---CTT----
T ss_pred ceEEEEECCCCcEEEeecC--C-CCccccceECCCCCEEEEEEcC------CcEEEEECCCCCcEEEEec---ccc----
Confidence 4679999998887766421 1 11111122 2244433343332 2699999988776655421 111
Q ss_pred EEEEECCEEEEEcc-------------cC--CC----------cccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE
Q 036185 399 AAAVIGSKIYVFGG-------------LN--ND----------TIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY 453 (1057)
Q Consensus 399 sa~~~~~~iyv~GG-------------~~--~~----------~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~ 453 (1057)
...+++.+++.. .. +. .....++.+|+.+.+...+... + ....+....-
T Consensus 124 --~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~---~-~~~~~~~~sp 197 (396)
T 3c5m_A 124 --WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD---T-AWLGHPIYRP 197 (396)
T ss_dssp --EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE---S-SCEEEEEEET
T ss_pred --cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC---C-cccccceECC
Confidence 111122222211 01 00 2235799999999888777532 1 1122222222
Q ss_pred -CCE-EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 454 -GSR-LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 454 -~~~-lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
+++ |++............|+.+|+.+..+..+.. ..+........+ +++.+++...........++++|+.+
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 198 FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE----HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC----CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred CCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec----cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 344 4444321111122579999998887766522 111112222233 45544444332222223499999999
Q ss_pred CeEEEeec
Q 036185 530 HIWKHLKL 537 (1057)
Q Consensus 530 ~~W~~v~~ 537 (1057)
.+...+..
T Consensus 274 g~~~~l~~ 281 (396)
T 3c5m_A 274 LENEEVMV 281 (396)
T ss_dssp CCEEEEEE
T ss_pred CCeEEeee
Confidence 88777653
No 428
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=90.63 E-value=22 Score=38.66 Aligned_cols=208 Identities=10% Similarity=0.085 Sum_probs=93.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECC-EEEEEcccCCCCCCCCcE--EEEECCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGD-HMFIIGGRADPLNILSDV--WVFNMAK 379 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~-~Iyv~GG~~~~~~~~~~v--~~yd~~t 379 (1057)
..+++|.+...+ ...-.+|.+|+.++++..+... ......+.+..-++ .||+.+.... ....+ |.++..+
T Consensus 14 ~~~~vg~y~~~~--~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 14 LTMLVGTYTSGN--SKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEK 86 (361)
T ss_dssp EEEEEEECCSSS--CCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSS---TTCEEEEEEEETTT
T ss_pred eEEEEEeccCCC--CCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCC---CCCcEEEEEEeCCC
Confidence 455677776521 1223456678888888776532 11111122222233 5766654311 12344 5556666
Q ss_pred CcEEEeeccCCCCC-cccceEEEEECCE-EEEEcccCCCcccceEEEEECCCCc-E----EEeecCCCCCCC-----cce
Q 036185 380 SKWTLLECSGSVFQ-PRHRHAAAVIGSK-IYVFGGLNNDTIFSSLHVLDTDTLQ-W----KELLINGEGPCA-----RHS 447 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~-~R~~hsa~~~~~~-iyv~GG~~~~~~~~~v~~yD~~t~~-W----~~~~~~g~~P~~-----r~~ 447 (1057)
+..+.+... +. ...-+..+. +++ +|+.+..+ ..+..|++.+.. . ......+.-|.+ ...
T Consensus 87 g~~~~~~~~---~~~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~ 157 (361)
T 3scy_A 87 GTLHLLNTQ---KTMGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHL 157 (361)
T ss_dssp TEEEEEEEE---ECSSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCE
T ss_pred CcEEEeeEe---ccCCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcc
Confidence 777766521 11 111122223 554 66544322 357888876432 1 111111111111 112
Q ss_pred eEEEEE-CC-EEEEEecCCCCcccCcEEEEECCCCe-------EEEe---eccCCCCCCceeeEEEEE-CC-EEEEEecc
Q 036185 448 HSMLAY-GS-RLYMFGGYNGEKALGDLYTFDVHACL-------WKKE---DIAARSPHARFSHTMFLY-KN-YLGLFGGC 513 (1057)
Q Consensus 448 ~s~~~~-~~-~lyv~GG~~~~~~~~~l~~yd~~t~~-------W~~v---~~~~~~P~~R~~hs~~~~-~~-~l~i~GG~ 513 (1057)
|+++.. ++ .+|+.+.. .+.+++|++.... .... .. ...+....-..++.. ++ .+|+.+.
T Consensus 158 ~~~~~spdg~~l~~~~~~-----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~- 230 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLG-----TDQIHKFNINPNANADNKEKFLTKGTPEA-FKVAPGSGPRHLIFNSDGKFAYLINE- 230 (361)
T ss_dssp EEEEECTTSSEEEEEETT-----TTEEEEEEECTTCCTTTCCCCEEEEEEEE-EECCTTCCEEEEEECTTSSEEEEEET-
T ss_pred eEEEECCCCCEEEEEeCC-----CCEEEEEEEcCCCCcccccceeecccccc-eecCCCCCCeEEEEcCCCCEEEEEcC-
Confidence 434433 34 46665432 2357777665433 2111 00 011111111222222 44 5666653
Q ss_pred CCCCCCCeEEEEECCCCeEEEeec
Q 036185 514 PVRQNYQELSLLDLQLHIWKHLKL 537 (1057)
Q Consensus 514 ~~~~~~~~i~~yd~~~~~W~~v~~ 537 (1057)
..+.+.+||+.+.++..+..
T Consensus 231 ----~~~~v~v~~~~~g~~~~~~~ 250 (361)
T 3scy_A 231 ----IGGTVIAFRYADGMLDEIQT 250 (361)
T ss_dssp ----TTCEEEEEEEETTEEEEEEE
T ss_pred ----CCCeEEEEEecCCceEEeEE
Confidence 23478999988888766543
No 429
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=90.53 E-value=8.3 Score=43.38 Aligned_cols=221 Identities=13% Similarity=0.044 Sum_probs=103.8
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
+.+++.|+.++ .+.++|+.+++-.... .. ......+...++.+++.|+.+. .++.+|..+..
T Consensus 159 g~~lasgs~Dg--------~v~iWd~~~~~~~~~~--~~--h~~~v~~~s~~~~~l~sgs~d~------~i~~~d~~~~~ 220 (420)
T 4gga_A 159 GNYLAVGTSSA--------EVQLWDVQQQKRLRNM--TS--HSARVGSLSWNSYILSSGSRSG------HIHHHDVRVAE 220 (420)
T ss_dssp SSEEEEEETTS--------CEEEEETTTTEEEEEE--CC--CSSCEEEEEEETTEEEEEETTS------EEEEEETTSSS
T ss_pred CCEEEEEECCC--------eEEEEEcCCCcEEEEE--eC--CCCceEEEeeCCCEEEEEeCCC------ceeEeeecccc
Confidence 45777777554 5788888877644322 11 1222334445667777777654 57778876654
Q ss_pred EEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGEGPCARHSHSMLAYGSRL 457 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~~P~~r~~~s~~~~~~~l 457 (1057)
.......+. ......... ++..++.|+.++. +.++|..+.. +..+........+....+....+..+
T Consensus 221 ~~~~~~~~h----~~~~~~~~~~~~g~~l~s~~~D~~-----v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 221 HHVATLSGH----SQEVCGLRWAPDGRHLASGGNDNL-----VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp CEEEEEECC----SSCEEEEEECTTSSEEEEEETTSC-----EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred eeeEEeccc----ccceeeeeecCCCCeeeeeecccc-----ceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 332221111 111111112 4556666666543 6677776543 11111100001111111111123445
Q ss_pred EEE-ecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 458 YMF-GGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 458 yv~-GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
++. ||..+ ..+..||+.+.......... . ...+++.. ++.+++.+|.. -..+.+||..+.+-..
T Consensus 292 la~~~gs~D----~~I~iwd~~t~~~~~~~~~~---~--~v~~~~~~~~~~~lv~~sg~~----d~~I~iwd~~~~~~v~ 358 (420)
T 4gga_A 292 LATGGGTSD----RHIRIWNVCSGACLSAVDAH---S--QVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAKVA 358 (420)
T ss_dssp EEEEECTTT----CEEEEEETTTTEEEEEEECS---S--CEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCEEE
T ss_pred EEEEeecCC----CEEEEEeCCccccceeeccc---c--ceeeeeecCCCCeEEEEEecC----CCEEEEEECCCCcEEE
Confidence 544 44322 24788999887755432111 1 11222222 45666665642 2368899987764322
Q ss_pred eeccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 535 LKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 535 v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
... +......+.+...++.+++.||.+.
T Consensus 359 --~l~-gH~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 359 --ELK-GHTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp --EEC-CCSSCEEEEEECTTSSCEEEEETTT
T ss_pred --EEc-CCCCCEEEEEEcCCCCEEEEEecCC
Confidence 111 1111222222223567777777643
No 430
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.39 E-value=3.2 Score=45.84 Aligned_cols=224 Identities=8% Similarity=-0.013 Sum_probs=103.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
.+++.|+.++ .+.++|+.+.+..... ..+.+......... ++.+++.|+.++ .+.+||+.+.
T Consensus 113 ~~l~s~~~d~--------~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~~~ 176 (408)
T 4a11_B 113 GMFTSSSFDK--------TLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLKSG 176 (408)
T ss_dssp TCEEEEETTS--------EEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSS------SEEEEESSSS
T ss_pred cEEEEEeCCC--------eEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCC------eEEEEeCCCc
Confidence 4677776443 5788898877654433 12222221111111 334677776654 6899998776
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CCE-EEEEcccCCCcccceEEEEECCCCc--EEEeecCC-----CC----CCCcc
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GSK-IYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLING-----EG----PCARH 446 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~~-iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g-----~~----P~~r~ 446 (1057)
.....- ......-.+..+ ++. +++.|+.++. +..||+.+.. ...+.... .. .....
T Consensus 177 ~~~~~~-----~~~~~~v~~~~~~~~~~~ll~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (408)
T 4a11_B 177 SCSHIL-----QGHRQEILAVSWSPRYDYILATASADSR-----VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG 246 (408)
T ss_dssp CCCEEE-----CCCCSCEEEEEECSSCTTEEEEEETTSC-----EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS
T ss_pred ceeeee-----cCCCCcEEEEEECCCCCcEEEEEcCCCc-----EEEEECCCCCcccccccccccccceeeccccccccC
Confidence 432221 111111222222 233 7778877654 8888886653 22221100 00 01111
Q ss_pred e-eEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCC--CceeeEEEEECCEEEEEeccCCCCCCCeE
Q 036185 447 S-HSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPH--ARFSHTMFLYKNYLGLFGGCPVRQNYQEL 522 (1057)
Q Consensus 447 ~-~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~--~R~~hs~~~~~~~l~i~GG~~~~~~~~~i 522 (1057)
. .+++.. ++..++.|+.++ .+..||+.+..-........... ...........+..+++++. ...+
T Consensus 247 ~v~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i 316 (408)
T 4a11_B 247 KVNGLCFTSDGLHLLTVGTDN-----RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY-----GSTI 316 (408)
T ss_dssp CEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE-----TTEE
T ss_pred ceeEEEEcCCCCEEEEecCCC-----eEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEec-----CCEE
Confidence 1 122222 456777777654 48899988765332211111111 11111111112233344442 2478
Q ss_pred EEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 523 SLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 523 ~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
.+||+.+.+-...-. .........+...++.+++.||.+.
T Consensus 317 ~v~d~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg 356 (408)
T 4a11_B 317 AVYTVYSGEQITMLK---GHYKTVDCCVFQSNFQELYSGSRDC 356 (408)
T ss_dssp EEEETTTCCEEEEEC---CCSSCEEEEEEETTTTEEEEEETTS
T ss_pred EEEECcCCcceeeec---cCCCeEEEEEEcCCCCEEEEECCCC
Confidence 899988765443211 1111122223333567777776543
No 431
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=90.28 E-value=19 Score=39.34 Aligned_cols=145 Identities=12% Similarity=0.080 Sum_probs=77.8
Q ss_pred CEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE----CCEEEEEcccCCCcccceEEEEECCC
Q 036185 354 DHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI----GSKIYVFGGLNNDTIFSSLHVLDTDT 429 (1057)
Q Consensus 354 ~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~----~~~iyv~GG~~~~~~~~~v~~yD~~t 429 (1057)
+..++.|+.++ .+.+||+.+.+....-. +. ...-.+..+ ++..++.|+.++. +..||+.+
T Consensus 166 ~~~l~t~s~D~------~v~lwd~~~~~~~~~~~-~h----~~~v~~~~~~~~~~g~~l~sgs~Dg~-----v~~wd~~~ 229 (354)
T 2pbi_B 166 DMQILTASGDG------TCALWDVESGQLLQSFH-GH----GADVLCLDLAPSETGNTFVSGGCDKK-----AMVWDMRS 229 (354)
T ss_dssp SSEEEEEETTS------EEEEEETTTCCEEEEEE-CC----SSCEEEEEECCCSSCCEEEEEETTSC-----EEEEETTT
T ss_pred CCEEEEEeCCC------cEEEEeCCCCeEEEEEc-CC----CCCeEEEEEEeCCCCCEEEEEeCCCe-----EEEEECCC
Confidence 44555665543 68899998876533210 11 011112222 3467888887654 88999988
Q ss_pred CcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCE
Q 036185 430 LQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNY 506 (1057)
Q Consensus 430 ~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~ 506 (1057)
.+....-.. . ...-.+++.. ++..++.|+.++ .+..||+.+..-...... ........++.+ ++.
T Consensus 230 ~~~~~~~~~---h-~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~~~~~~---~~~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 230 GQCVQAFET---H-ESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREVAIYSK---ESIIFGASSVDFSLSGR 297 (354)
T ss_dssp CCEEEEECC---C-SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEECC---TTCCSCEEEEEECTTSS
T ss_pred CcEEEEecC---C-CCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEEEEEcC---CCcccceeEEEEeCCCC
Confidence 775443211 1 1111122222 456777887665 478899887654332111 111222333333 566
Q ss_pred EEEEeccCCCCCCCeEEEEECCCCe
Q 036185 507 LGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 507 l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+++.|+.+ ..+.+||+.+..
T Consensus 298 ~l~~g~~d-----~~i~vwd~~~~~ 317 (354)
T 2pbi_B 298 LLFAGYND-----YTINVWDVLKGS 317 (354)
T ss_dssp EEEEEETT-----SCEEEEETTTCS
T ss_pred EEEEEECC-----CcEEEEECCCCc
Confidence 77777632 368899987654
No 432
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.27 E-value=9.6 Score=44.74 Aligned_cols=110 Identities=8% Similarity=-0.023 Sum_probs=59.0
Q ss_pred EEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCc-ceeEEEEE-C-CEEEEEecCCCCcccCcEEEEECCCCeEE
Q 036185 407 IYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCAR-HSHSMLAY-G-SRLYMFGGYNGEKALGDLYTFDVHACLWK 483 (1057)
Q Consensus 407 iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r-~~~s~~~~-~-~~lyv~GG~~~~~~~~~l~~yd~~t~~W~ 483 (1057)
+++.|+.++ .+..||..+.+-...-.. ..... .-.++... + +..++.|+.++ .+..||+.+....
T Consensus 175 ~l~~~~~d~-----~v~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDDG-----SVVFYQGPPFKFSASDRT--HHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETTT-----EEEEEETTTBEEEEEECS--SSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEE
T ss_pred EEEEEeCCC-----cEEEEeCCCcceeeeecc--cCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCEe
Confidence 677776654 488888876654332211 01100 12233333 4 56777777654 4899999887655
Q ss_pred EeeccCC-CCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 484 KEDIAAR-SPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 484 ~v~~~~~-~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
..-.... ............ ++..++.|+.+ ..+.+||+.+.+...
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d-----~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWL-DSQKFATVGAD-----ATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EECCBTTBCCCSCEEEEEES-SSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred EEecccccccCCceEEEEEc-CCCEEEEEcCC-----CcEEEEECCCCcEEE
Confidence 4310000 111111112222 77777777743 468999998876544
No 433
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.23 E-value=6.7 Score=41.97 Aligned_cols=186 Identities=10% Similarity=0.049 Sum_probs=91.2
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEE-ECCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSL-IGDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
.+++.|+.++ .+.++|..++.....- ...... -.++.. -++..++.|+.++ .+.+||..+..
T Consensus 26 ~~l~s~~~dg--------~v~lWd~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~l~s~s~d~------~i~vwd~~~~~ 88 (304)
T 2ynn_A 26 PWVLTTLYSG--------RVELWNYETQVEVRSI--QVTETP-VRAGKFIARKNWIIVGSDDF------RIRVFNYNTGE 88 (304)
T ss_dssp SEEEEEETTS--------EEEEEETTTTEEEEEE--ECCSSC-EEEEEEEGGGTEEEEEETTS------EEEEEETTTCC
T ss_pred CEEEEEcCCC--------cEEEEECCCCceeEEe--eccCCc-EEEEEEeCCCCEEEEECCCC------EEEEEECCCCc
Confidence 5777777554 5778888776543211 111111 112222 2456667777654 68899988775
Q ss_pred EEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCEEE
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GSRLY 458 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~~ly 458 (1057)
-...- .+ ....-.+.++. ++.+++.|+.++. +..||..+..-......+ ....-.+++.. ++.++
T Consensus 89 ~~~~~-~~---h~~~v~~~~~~~~~~~l~sgs~D~~-----v~lWd~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 89 KVVDF-EA---HPDYIRSIAVHPTKPYVLSGSDDLT-----VKLWNWENNWALEQTFEG---HEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEEE-EC---CSSCEEEEEECSSSSEEEEEETTSC-----EEEEEGGGTTEEEEEECC---CCSCEEEEEECTTCTTEE
T ss_pred EEEEE-eC---CCCcEEEEEEcCCCCEEEEECCCCe-----EEEEECCCCcchhhhhcc---cCCcEEEEEECCCCCCEE
Confidence 32211 01 11111222222 4557777777653 778887665211111111 11111223332 34677
Q ss_pred EEecCCCCcccCcEEEEECCCCe--EEEeeccCCCCCCceeeEEEEE---CCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 459 MFGGYNGEKALGDLYTFDVHACL--WKKEDIAARSPHARFSHTMFLY---KNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 459 v~GG~~~~~~~~~l~~yd~~t~~--W~~v~~~~~~P~~R~~hs~~~~---~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
+.|+.++ .+..||+.+.. .... .+ ..+........ ++.+++.|+.+ ..+.++|+.+.+-
T Consensus 157 ~sgs~D~-----~v~iwd~~~~~~~~~~~--~~---~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 157 ASGCLDR-----TVKVWSLGQSTPNFTLT--TG---QERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSC 220 (304)
T ss_dssp EEEETTS-----EEEEEETTCSSCSEEEE--CC---CTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEE
T ss_pred EEEeCCC-----eEEEEECCCCCccceec--cC---CcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCcc
Confidence 8888765 47788876533 2111 01 11111111111 44566777643 3688999988653
No 434
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.19 E-value=12 Score=41.03 Aligned_cols=199 Identities=10% Similarity=-0.038 Sum_probs=99.0
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceE
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHA 399 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hs 399 (1057)
..+|.+|+.+++...+.. .+.......+..-+++.++++..+ ..++++|+.+..-..+. ..+.......
T Consensus 60 ~~l~~~d~~~g~~~~lt~--~~~~~~~~~~~spdg~~l~~~~~~------~~l~~~d~~~g~~~~~~---~~~~~~~~~~ 128 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTE--GRGDNTFGGFLSPDDDALFYVKDG------RNLMRVDLATLEENVVY---QVPAEWVGYG 128 (388)
T ss_dssp CEEEEEETTTCEEEECCC--SSCBCSSSCEECTTSSEEEEEETT------TEEEEEETTTCCEEEEE---ECCTTEEEEE
T ss_pred ceEEEEeCCCCceEEeee--CCCCCccceEEcCCCCEEEEEeCC------CeEEEEECCCCcceeee---echhhccccc
Confidence 479999999988777652 221111111222244433443322 47999999988766554 2222222112
Q ss_pred EEEE--CCEEEEEc---ccC--------------CCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEE
Q 036185 400 AAVI--GSKIYVFG---GLN--------------NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYM 459 (1057)
Q Consensus 400 a~~~--~~~iyv~G---G~~--------------~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv 459 (1057)
.... +++.++.- +.. .......++.+|+.+.+-..+.... ....+....- +++.++
T Consensus 129 ~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~ 204 (388)
T 3pe7_A 129 TWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN----QWLGHPIYRPYDDSTVA 204 (388)
T ss_dssp EEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEE
T ss_pred ceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC----ccccccEECCCCCCEEE
Confidence 2222 33333211 000 0112367999999998877765421 1223333333 455444
Q ss_pred EecCCC-CcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 460 FGGYNG-EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 460 ~GG~~~-~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
+....+ ......+|.+|+.+.....+.. .+... ......+ +++.+++...........++++|+.+.+.+.+.
T Consensus 205 ~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 205 FCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGE-SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp EEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTE-EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE
T ss_pred EEEecCCCCCcceEEEEeCCCCceEEeee---CCCCc-ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE
Confidence 433321 2235689999998876665521 11111 1112223 454333333222212225999999998877664
Q ss_pred c
Q 036185 537 L 537 (1057)
Q Consensus 537 ~ 537 (1057)
.
T Consensus 281 ~ 281 (388)
T 3pe7_A 281 S 281 (388)
T ss_dssp E
T ss_pred c
Confidence 3
No 435
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.16 E-value=6.6 Score=48.43 Aligned_cols=186 Identities=9% Similarity=0.020 Sum_probs=96.2
Q ss_pred cEEEEeCCCCcEEEeccCCCC---CCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC------CcEE---Eeec
Q 036185 321 DLFLLDPLQGTIKAIHTEGSP---SPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK------SKWT---LLEC 387 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~~P---~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t------~~W~---~~~~ 387 (1057)
-+++||+.++++..+...... ....-+++... ++.|++ |... .-+++||+.+ ..+. ....
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCL------GGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESS------SCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECC------CceEEEccccccccCCcceeccccccc
Confidence 478899998888776422111 11112233333 457777 3322 2378888653 2232 1111
Q ss_pred cCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECCEEEEEecCCC
Q 036185 388 SGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGSRLYMFGGYNG 465 (1057)
Q Consensus 388 ~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~~lyv~GG~~~ 465 (1057)
...++.. .-.+.... ++.||++||..+ -+++||+.+.+++.+... .++......++.. .++.||+- ..
T Consensus 466 ~~~l~~~-~i~~i~~d~~g~lWi~~~t~~-----Gl~~~d~~~~~~~~~~~~-~~~~~~~~~~i~~d~~g~lWig-t~-- 535 (758)
T 3ott_A 466 HNGLSGM-FINQIIPDNEGNVWVLLYNNK-----GIDKINPRTREVTKLFAD-ELTGEKSPNYLLCDEDGLLWVG-FH-- 535 (758)
T ss_dssp GGTCSCS-CEEEEEECTTSCEEEEETTCS-----SEEEEETTTTEEEEECTT-TSCGGGCEEEEEECTTSCEEEE-ET--
T ss_pred ccccccc-eeeeEEEcCCCCEEEEccCCC-----CcEEEeCCCCceEEecCC-CcCCCcccceEEECCCCCEEEE-ec--
Confidence 1112111 11122221 467998766543 389999999999887532 1221111222222 24667753 32
Q ss_pred CcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 466 EKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 466 ~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
+-+.+||+.++.+..... ..+|.. ...+++.-++.|++-.. +.+.+||+++.+.....
T Consensus 536 ----~Gl~~~~~~~~~~~~~~~-~gl~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 536 ----GGVMRINPKDESQQSISF-GSFSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN 593 (758)
T ss_dssp ----TEEEEECC--CCCCBCCC-CC---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC-
T ss_pred ----CceEEEecCCCceEEecc-cCCCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec
Confidence 238999999888765421 223322 23344444788877542 36899999998877653
No 436
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=90.15 E-value=40 Score=40.89 Aligned_cols=226 Identities=12% Similarity=0.001 Sum_probs=110.7
Q ss_pred ccEEEEeCCCCcEEEeccC-CCCC-Ccccc-EEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcc
Q 036185 320 NDLFLLDPLQGTIKAIHTE-GSPS-PRLGH-TSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPR 395 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~-~~P~-~R~~h-s~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R 395 (1057)
..+|+.+.....|..+-.. .+.. ..... +.... +++.++|+...+. .-...++++|+.++........+ ..
T Consensus 98 ~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G-~~~~~i~v~d~~tg~~~~~~~~~----~~ 172 (710)
T 2xdw_A 98 RVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASG-SDWVTIKFMKVDGAKELPDVLER----VK 172 (710)
T ss_dssp CEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETT-CSCEEEEEEETTTTEEEEEEEEE----EC
T ss_pred EEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCC-CceEEEEEEECCCCCCCcccccC----cc
Confidence 4566666666666554211 1110 00111 11222 4555555433221 12237999999999887653211 11
Q ss_pred cceEEEEE-CCEEEEEcccCCC-----------cccceEEEEECCCCcEE--EeecCCCCCCCcceeEE-EEECCEEEEE
Q 036185 396 HRHAAAVI-GSKIYVFGGLNND-----------TIFSSLHVLDTDTLQWK--ELLINGEGPCARHSHSM-LAYGSRLYMF 460 (1057)
Q Consensus 396 ~~hsa~~~-~~~iyv~GG~~~~-----------~~~~~v~~yD~~t~~W~--~~~~~g~~P~~r~~~s~-~~~~~~lyv~ 460 (1057)
..+.+.. +++.++++..+.. .....++++++.+.+.. .+.... ..+...... ..-+++.+++
T Consensus 173 -~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~--~~~~~~~~~~~SpDg~~l~~ 249 (710)
T 2xdw_A 173 -FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP--DEPKWMGGAELSDDGRYVLL 249 (710)
T ss_dssp -SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT--TCTTCEEEEEECTTSCEEEE
T ss_pred -cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC--CCCeEEEEEEEcCCCCEEEE
Confidence 1122222 5554444443322 23456999999887643 222211 112222222 2234554444
Q ss_pred ecCCCCcccCcEEEEECCC------C--eEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCC--
Q 036185 461 GGYNGEKALGDLYTFDVHA------C--LWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLH-- 530 (1057)
Q Consensus 461 GG~~~~~~~~~l~~yd~~t------~--~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~-- 530 (1057)
+...+....++++.+|+.+ . .|..+.... .........-++.+|+.+..+ .....++.+|+.+.
T Consensus 250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~----~~~~~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF----EGEYDYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEE 323 (710)
T ss_dssp EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS----SSCEEEEEEETTEEEEEECTT--CTTCEEEEEETTSCCG
T ss_pred EEEccCCCccEEEEEECcccccccCCccceEEeeCCC----CcEEEEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCc
Confidence 4433322357899999976 4 577763211 111122333477888886532 23568999999876
Q ss_pred -eEEEeeccCCCCCcccceEEEEe-CCEEEEEeC
Q 036185 531 -IWKHLKLNYVCKELFVRSTANVV-DDDLIMIGG 562 (1057)
Q Consensus 531 -~W~~v~~~~~~~~~~~~~~a~~~-~~~iyi~GG 562 (1057)
.|+.+...... ..-...... ++.+++...
T Consensus 324 ~~~~~l~~~~~~---~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 324 SKWKVLVPEHEK---DVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp GGCEEEECCCSS---CEEEEEEEETTTEEEEEEE
T ss_pred ccceeccCCCCC---CeEEEEEEEcCCEEEEEEE
Confidence 58887532211 011223344 566666554
No 437
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.11 E-value=20 Score=37.36 Aligned_cols=190 Identities=6% Similarity=-0.059 Sum_probs=100.1
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+|+.... .+.++.||+. +++..+.... ....-++++.. ++.+|+.... .+.+++||+. .
T Consensus 73 g~l~v~~~~--------~~~v~~~d~~-g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g 134 (300)
T 2qc5_A 73 GDIWFTENG--------ANKIGKLSKK-GGFTEYPLPQ--PDSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-G 134 (300)
T ss_dssp SCEEEEETT--------TTEEEEECTT-SCEEEEECSS--TTCCEEEEEECSTTCEEEEETT------TTEEEEECTT-S
T ss_pred CCEEEEecC--------CCeEEEECCC-CCeEEecCCC--CCCCCccceECCCCCEEEEccC------CCeEEEECCC-C
Confidence 357775431 2458899988 7776554221 11222344443 5678876432 2368999987 6
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEE
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLY 458 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~ly 458 (1057)
+........ ....-++.+.. ++++|+.... .+.+++||+ +.++..+...... ..-..++.. ++.+|
T Consensus 135 ~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 135 TIYEYDLPN---KGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALW 202 (300)
T ss_dssp CEEEEECSS---TTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEE
T ss_pred CEEEccCCC---CCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEE
Confidence 665543211 11122233332 4668875422 235899998 7777765432111 112233332 46788
Q ss_pred EEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 459 MFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 459 v~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
+.... .+.+++||+ +..+......... ..-.+++.- ++.||+... ..+.+.+||+ +.+.....
T Consensus 203 v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~-----~~~~i~~~~~-~g~~~~~~ 266 (300)
T 2qc5_A 203 FVEIM-----GNKIGRITT-TGEISEYDIPTPN---ARPHAITAGKNSEIWFTEW-----GANQIGRITN-DNTIQEYQ 266 (300)
T ss_dssp EEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEEEEEECSTTCEEEEET-----TTTEEEEECT-TSCEEEEE
T ss_pred EEccC-----CCEEEEEcC-CCcEEEEECCCCC---CCceEEEECCCCCEEEecc-----CCCeEEEECC-CCcEEEEE
Confidence 76432 235899998 5666554221111 111233332 567877652 2357999998 45666554
No 438
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=90.10 E-value=22 Score=37.97 Aligned_cols=205 Identities=6% Similarity=-0.023 Sum_probs=104.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+|+.+..+ ..+++||+.++++..+... ....-++++.. ++++|+.+.... .....+++||+.+.
T Consensus 56 g~l~~~~~~~--------~~i~~~d~~~~~~~~~~~~---~~~~~~~i~~~~dg~l~v~~~~~~--~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 56 GQLFLLDVFE--------GNIFKINPETKEIKRPFVS---HKANPAAIKIHKDGRLFVCYLGDF--KSTGGIFAATENGD 122 (333)
T ss_dssp SCEEEEETTT--------CEEEEECTTTCCEEEEEEC---SSSSEEEEEECTTSCEEEEECTTS--SSCCEEEEECTTSC
T ss_pred CCEEEEECCC--------CEEEEEeCCCCcEEEEeeC---CCCCcceEEECCCCcEEEEeCCCC--CCCceEEEEeCCCC
Confidence 3588876532 3689999999888765311 11222333333 567887654321 12257999999888
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEEcccC-CCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC-E
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLN-NDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GS-R 456 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~-~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~-~ 456 (1057)
....+.. .......-...++. ++++|+..... .......++.||+.+.+...+.... . .....+.. ++ .
T Consensus 123 ~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~---~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 123 NLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--S---VANGIALSTDEKV 195 (333)
T ss_dssp SCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--S---SEEEEEECTTSSE
T ss_pred EEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--C---cccceEECCCCCE
Confidence 7653321 11111112222222 56787754321 1122457999999887776654311 1 11223332 33 5
Q ss_pred EEEEecCCCCcccCcEEEEECCC--CeEEEeec--cCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCe
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHA--CLWKKEDI--AARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t--~~W~~v~~--~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+|+.... .+.+++||+.+ ........ ....+....-.+++.- ++.+|+... ....+++||++...
T Consensus 196 l~v~~~~-----~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~-----~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 196 LWVTETT-----ANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMY-----GQGRVLVFNKRGYP 265 (333)
T ss_dssp EEEEEGG-----GTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEE-----TTTEEEEECTTSCE
T ss_pred EEEEeCC-----CCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEc-----CCCEEEEECCCCCE
Confidence 7776432 34689999854 23322110 0001111111222322 567777643 12479999997665
Q ss_pred EEEee
Q 036185 532 WKHLK 536 (1057)
Q Consensus 532 W~~v~ 536 (1057)
-..+.
T Consensus 266 ~~~~~ 270 (333)
T 2dg1_A 266 IGQIL 270 (333)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55554
No 439
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.05 E-value=5.8 Score=43.68 Aligned_cols=201 Identities=13% Similarity=0.062 Sum_probs=98.6
Q ss_pred cccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCE-EEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcc
Q 036185 319 RNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDH-MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPR 395 (1057)
Q Consensus 319 ~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~-Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R 395 (1057)
...++.+|+.+++...+.. ........... ++. |++.. ..........+|.+|..+..+..+.. ..+.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~----~~~~~~~~~~sp~dg~~l~~~~-~~~~~~~~~~l~~~d~~~~~~~~l~~----~~~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQ----DTAWLGHPIYRPFDDSTVGFCH-EGPHDLVDARMWLVNEDGSNVRKIKE----HAEG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEE----ESSCEEEEEEETTEEEEEEEEE-CSCSSSCSCCCEEEETTSCCCEESSC----CCTT
T ss_pred cceEEEEECCCCcEEeecc----CCcccccceECCCCCCEEEEEe-cCCCCCCCceEEEEECCCCceeEeec----cCCC
Confidence 3578899998888776641 11112222222 244 44433 22211223689999998887776642 1111
Q ss_pred cceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCC-------
Q 036185 396 HRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNG------- 465 (1057)
Q Consensus 396 ~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~------- 465 (1057)
.......+ +++.+++...........++.+|+.+.+...+... +. .. ....- +++++++++.+.
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM---PP--CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---CS--EE-EEEECSSSSEEEEEECCC-------
T ss_pred ccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---CC--CC-CCccCCCCceEEEecCCcceeeccc
Confidence 11112222 45533333332222224599999999888777542 21 12 22233 666666655321
Q ss_pred ----CcccCcEEEEECCCCeEEEeeccCCCC----CC---ceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEEE
Q 036185 466 ----EKALGDLYTFDVHACLWKKEDIAARSP----HA---RFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 466 ----~~~~~~l~~yd~~t~~W~~v~~~~~~P----~~---R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~ 534 (1057)
......++.+|+.+.....+....... .. ...+....-+++.+++..... ....+|.+|+.+..++.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~--~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFE--GVPAIYIADVPESYKHL 389 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT--SSCEEEEEECCTTCC--
T ss_pred cccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCC--CCceEEEEEEccccccc
Confidence 112357999999888766553221100 00 000111112443333433221 23479999988887766
Q ss_pred ee
Q 036185 535 LK 536 (1057)
Q Consensus 535 v~ 536 (1057)
+.
T Consensus 390 ~~ 391 (396)
T 3c5m_A 390 EH 391 (396)
T ss_dssp --
T ss_pred cc
Confidence 43
No 440
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.05 E-value=5.5 Score=44.41 Aligned_cols=202 Identities=8% Similarity=0.039 Sum_probs=97.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccC---CCCCCccc-cEEEEE-CC-EEEEEcccCCCCCCCCcEEEE
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTE---GSPSPRLG-HTSSLI-GD-HMFIIGGRADPLNILSDVWVF 375 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~---~~P~~R~~-hs~v~~-~~-~Iyv~GG~~~~~~~~~~v~~y 375 (1057)
+.+++.|+.++ .+.++|..++.+...... .+...... .++... ++ .+++.|+.++ .+.+|
T Consensus 94 ~~~l~s~s~dg--------~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iw 159 (402)
T 2aq5_A 94 DNVIASGSEDC--------TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVW 159 (402)
T ss_dssp TTEEEEEETTS--------EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEE
T ss_pred CCEEEEEeCCC--------eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEE
Confidence 35777887543 477788776532110000 00001111 122222 22 5777777654 68999
Q ss_pred ECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEEC
Q 036185 376 NMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYG 454 (1057)
Q Consensus 376 d~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~ 454 (1057)
|+.+.+....-. .......-.+.+.. ++..++.|+.++ .+.+||+.+.+-...-..+. ...+.......-+
T Consensus 160 d~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 160 DVGTGAAVLTLG--PDVHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGTVVAEKDRPH-EGTRPVHAVFVSE 231 (402)
T ss_dssp ETTTTEEEEEEC--TTTCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECSS-CSSSCCEEEECST
T ss_pred ECCCCCccEEEe--cCCCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCceeeeeccCC-CCCcceEEEEcCC
Confidence 999886544320 00111111222222 566777777654 58999998876543321111 1111222233345
Q ss_pred CEEEEEecCCCCcccCcEEEEECCCCeE--EEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCC
Q 036185 455 SRLYMFGGYNGEKALGDLYTFDVHACLW--KKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 455 ~~lyv~GG~~~~~~~~~l~~yd~~t~~W--~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
+++++.|.... .-..+..||+.+..- .... .+......+++.. +..+++.|+.+ ..+.+||+.+.
T Consensus 232 ~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~g~~d-----g~i~i~d~~~~ 300 (402)
T 2aq5_A 232 GKILTTGFSRM--SERQVALWDTKHLEEPLSLQE----LDTSSGVLLPFFDPDTNIVYLCGKGD-----SSIRYFEITSE 300 (402)
T ss_dssp TEEEEEEECTT--CCEEEEEEETTBCSSCSEEEE----CCCCSSCEEEEEETTTTEEEEEETTC-----SCEEEEEECSS
T ss_pred CcEEEEeccCC--CCceEEEEcCccccCCceEEe----ccCCCceeEEEEcCCCCEEEEEEcCC-----CeEEEEEecCC
Confidence 67777762111 123588899876431 1110 1111112223333 34566666532 36888888876
Q ss_pred e--EEEee
Q 036185 531 I--WKHLK 536 (1057)
Q Consensus 531 ~--W~~v~ 536 (1057)
+ ...+.
T Consensus 301 ~~~~~~l~ 308 (402)
T 2aq5_A 301 APFLHYLS 308 (402)
T ss_dssp TTCEEEEE
T ss_pred CcceEeec
Confidence 5 44443
No 441
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=89.96 E-value=7.9 Score=42.62 Aligned_cols=181 Identities=12% Similarity=0.048 Sum_probs=91.0
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE---CCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI---GDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~---~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
++.++.|+.++ .+.++|+.+++-...- ......-.++.+ +..+++.|+.++ .+.+||..
T Consensus 139 g~~l~sgs~d~--------~i~iwd~~~~~~~~~~----~~h~~~V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~ 200 (344)
T 4gqb_B 139 GTQAVSGSKDI--------CIKVWDLAQQVVLSSY----RAHAAQVTCVAASPHKDSVFLSCSEDN------RILLWDTR 200 (344)
T ss_dssp SSEEEEEETTS--------CEEEEETTTTEEEEEE----CCCSSCEEEEEECSSCTTEEEEEETTS------CEEEEETT
T ss_pred CCEEEEEeCCC--------eEEEEECCCCcEEEEE----cCcCCceEEEEecCCCCCceeeecccc------cccccccc
Confidence 35777787654 4788898877643321 111111122222 335778887654 58899998
Q ss_pred CCcEEEeeccCCCCCcccceEEEEE---CCEEEEEcccCCCcccceEEEEECCCCcE-EEeecCCCCCCCcceeEEEEE-
Q 036185 379 KSKWTLLECSGSVFQPRHRHAAAVI---GSKIYVFGGLNNDTIFSSLHVLDTDTLQW-KELLINGEGPCARHSHSMLAY- 453 (1057)
Q Consensus 379 t~~W~~~~~~g~~p~~R~~hsa~~~---~~~iyv~GG~~~~~~~~~v~~yD~~t~~W-~~~~~~g~~P~~r~~~s~~~~- 453 (1057)
+.+-...- ..........++.+ ++++++.|+.++ .+.+||+.+.+- ..+... ...-.+++..
T Consensus 201 ~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~l~sg~~dg-----~v~~wd~~~~~~~~~~~~h-----~~~v~~v~fsp 267 (344)
T 4gqb_B 201 CPKPASQI---GCSAPGYLPTSLAWHPQQSEVFVFGDENG-----TVSLVDTKSTSCVLSSAVH-----SQCVTGLVFSP 267 (344)
T ss_dssp SSSCEEEC---C----CCCEEEEEECSSCTTEEEEEETTS-----EEEEEESCC--CCEEEECC-----SSCEEEEEECS
T ss_pred ccceeeee---ecceeeccceeeeecCCCCcceEEeccCC-----cEEEEECCCCcEEEEEcCC-----CCCEEEEEEcc
Confidence 76543221 11111111222222 456788887664 478899876542 122211 1111222322
Q ss_pred C-CEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE---CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 454 G-SRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY---KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 454 ~-~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~---~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
+ .++++.|+.++ .+.+||..+.+-... .+ ... .-.++.+ +..+++.||.++ .+.++++.+
T Consensus 268 ~g~~~lasgs~D~-----~i~vwd~~~~~~~~~--~~---H~~-~V~~v~~sp~~~~llas~s~D~-----~v~~w~v~~ 331 (344)
T 4gqb_B 268 HSVPFLASLSEDC-----SLAVLDSSLSELFRS--QA---HRD-FVRDATWSPLNHSLLTTVGWDH-----QVVHHVVPT 331 (344)
T ss_dssp SSSCCEEEEETTS-----CEEEECTTCCEEEEE--CC---CSS-CEEEEEECSSSTTEEEEEETTS-----CEEEEECCC
T ss_pred CCCeEEEEEeCCC-----eEEEEECCCCcEEEE--cC---CCC-CEEEEEEeCCCCeEEEEEcCCC-----eEEEEECCC
Confidence 2 35667777654 378889888764433 11 111 1122333 345777787543 456666554
No 442
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.93 E-value=9.8 Score=43.22 Aligned_cols=160 Identities=6% Similarity=-0.058 Sum_probs=80.9
Q ss_pred CEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEE
Q 036185 354 DHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWK 433 (1057)
Q Consensus 354 ~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (1057)
+..++.|+.++ .+.+||+.+......-..+. ...-.+.+.. ++++++.|+.++ .+.+||+.+.+..
T Consensus 210 ~~~l~s~~~d~------~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~s-d~~~l~s~~~d~-----~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRDE------HIKISHYPQCFIVDKWLFGH--KHFVSSICCG-KDYLLLSAGGDD-----KIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETTS------CEEEEEESCTTCEEEECCCC--SSCEEEEEEC-STTEEEEEESSS-----EEEEEETTTCCEE
T ss_pred CcEEEEEcCCC------cEEEEECCCCceeeeeecCC--CCceEEEEEC-CCCEEEEEeCCC-----eEEEEECCCCcEe
Confidence 67788887653 68999988766433211111 1111122222 677777887554 5889999887653
Q ss_pred EeecCCC----------C-----------CCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEEC--CC-CeEEEeecc
Q 036185 434 ELLINGE----------G-----------PCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDV--HA-CLWKKEDIA 488 (1057)
Q Consensus 434 ~~~~~g~----------~-----------P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~--~t-~~W~~v~~~ 488 (1057)
..-.... . +....-..++.. +++.+++++.. -+.+.+||+ .+ ..+..+...
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~----d~~i~iw~~~~~~~~~l~~~~~~ 351 (450)
T 2vdu_B 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA----TKCIIILEMSEKQKGDLALKQII 351 (450)
T ss_dssp EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT----CSEEEEEEECSSSTTCEEEEEEE
T ss_pred eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC----CCeEEEEEeccCCCCceeeccEe
Confidence 3321100 0 001111122222 24444444421 235888888 33 445544222
Q ss_pred CCCCCCceeeEEEEECCEEEEEeccCCC----CCCCeEEEEECCCCeEEE
Q 036185 489 ARSPHARFSHTMFLYKNYLGLFGGCPVR----QNYQELSLLDLQLHIWKH 534 (1057)
Q Consensus 489 ~~~P~~R~~hs~~~~~~~l~i~GG~~~~----~~~~~i~~yd~~~~~W~~ 534 (1057)
.. ...-.+++...+.+++..+.... ...-.+|.++.++..|+.
T Consensus 352 ~~---~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~ 398 (450)
T 2vdu_B 352 TF---PYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVV 398 (450)
T ss_dssp EC---SSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEE
T ss_pred cc---CCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEE
Confidence 11 12223444556777776653221 122378888888888863
No 443
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=89.82 E-value=12 Score=41.94 Aligned_cols=184 Identities=10% Similarity=0.018 Sum_probs=90.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+++.||.++ .+.++|+.+.+.... +......-.++.+ ++..++.||.++ .+.+||+.+
T Consensus 162 ~~~l~sgs~D~--------~i~iwd~~~~~~~~~----~~~h~~~V~~v~~~p~~~~l~s~s~D~------~i~~wd~~~ 223 (410)
T 1vyh_C 162 GKLLASCSADM--------TIKLWDFQGFECIRT----MHGHDHNVSSVSIMPNGDHIVSASRDK------TIKMWEVQT 223 (410)
T ss_dssp SSEEEEEETTS--------CCCEEETTSSCEEEC----CCCCSSCEEEEEECSSSSEEEEEETTS------EEEEEETTT
T ss_pred CCEEEEEeCCC--------eEEEEeCCCCceeEE----EcCCCCCEEEEEEeCCCCEEEEEeCCC------eEEEEECCC
Confidence 35777777654 355677766543221 1111112222222 456667777654 688999988
Q ss_pred CcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-----
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA----- 452 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~----- 452 (1057)
......- .+. ...-.++.. ++.+++.|+.++. +.+||+.+......-.. .... -.++..
T Consensus 224 ~~~~~~~-~~h----~~~v~~~~~~~~g~~l~s~s~D~~-----v~vwd~~~~~~~~~~~~--h~~~--v~~~~~~~~~~ 289 (410)
T 1vyh_C 224 GYCVKTF-TGH----REWVRMVRPNQDGTLIASCSNDQT-----VRVWVVATKECKAELRE--HRHV--VECISWAPESS 289 (410)
T ss_dssp CCEEEEE-ECC----SSCEEEEEECTTSSEEEEEETTSC-----EEEEETTTCCEEEEECC--CSSC--EEEEEECCSCG
T ss_pred CcEEEEE-eCC----CccEEEEEECCCCCEEEEEcCCCe-----EEEEECCCCceeeEecC--CCce--EEEEEEcCccc
Confidence 7643221 111 111112222 4567777776653 77888877655432110 0000 011111
Q ss_pred ----------------ECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCC
Q 036185 453 ----------------YGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPV 515 (1057)
Q Consensus 453 ----------------~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~ 515 (1057)
..+.+++.|+.++ .+..||+.+..-...-. +. . . .-.+++.. ++..++.||.+
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~l~sgs~D~-----~i~iwd~~~~~~~~~~~-~h-~-~-~v~~v~~~~~g~~l~s~s~D- 359 (410)
T 1vyh_C 290 YSSISEATGSETKKSGKPGPFLLSGSRDK-----TIKMWDVSTGMCLMTLV-GH-D-N-WVRGVLFHSGGKFILSCADD- 359 (410)
T ss_dssp GGGGGGCCSCC-------CCEEEEEETTS-----EEEEEETTTTEEEEEEE-CC-S-S-CEEEEEECSSSSCEEEEETT-
T ss_pred ccchhhhccccccccCCCCCEEEEEeCCC-----eEEEEECCCCceEEEEE-CC-C-C-cEEEEEEcCCCCEEEEEeCC-
Confidence 1245667776654 48889988765332211 10 0 1 11122222 45666677632
Q ss_pred CCCCCeEEEEECCCCe
Q 036185 516 RQNYQELSLLDLQLHI 531 (1057)
Q Consensus 516 ~~~~~~i~~yd~~~~~ 531 (1057)
..+.++|..+.+
T Consensus 360 ----~~i~vwd~~~~~ 371 (410)
T 1vyh_C 360 ----KTLRVWDYKNKR 371 (410)
T ss_dssp ----TEEEEECCTTSC
T ss_pred ----CeEEEEECCCCc
Confidence 368888886653
No 444
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.78 E-value=6.2 Score=43.98 Aligned_cols=158 Identities=13% Similarity=0.031 Sum_probs=79.8
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeecc--CCCC-CcccceEEEEE-CC-EEEEEcccCCCcccceEEEEEC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECS--GSVF-QPRHRHAAAVI-GS-KIYVFGGLNNDTIFSSLHVLDT 427 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~--g~~p-~~R~~hsa~~~-~~-~iyv~GG~~~~~~~~~v~~yD~ 427 (1057)
++.+++.|+.++ .+.+||..++.+...... .... ....-.+.+.. ++ .+++.|+.++ .+.+||+
T Consensus 93 ~~~~l~s~s~dg------~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 161 (402)
T 2aq5_A 93 NDNVIASGSEDC------TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-----VILVWDV 161 (402)
T ss_dssp CTTEEEEEETTS------EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEEeCCC------eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-----EEEEEEC
Confidence 456777877654 688899887643110000 0000 01111222222 32 4777777665 3889999
Q ss_pred CCCcEEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCE
Q 036185 428 DTLQWKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNY 506 (1057)
Q Consensus 428 ~t~~W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~ 506 (1057)
.+.+....-... .....-.++... ++..++.|+.++ .+.+||+.+..-......+ ....+....+..-++.
T Consensus 162 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 233 (402)
T 2aq5_A 162 GTGAAVLTLGPD--VHPDTIYSVDWSRDGALICTSCRDK-----RVRVIEPRKGTVVAEKDRP-HEGTRPVHAVFVSEGK 233 (402)
T ss_dssp TTTEEEEEECTT--TCCSCEEEEEECTTSSCEEEEETTS-----EEEEEETTTTEEEEEEECS-SCSSSCCEEEECSTTE
T ss_pred CCCCccEEEecC--CCCCceEEEEECCCCCEEEEEecCC-----cEEEEeCCCCceeeeeccC-CCCCcceEEEEcCCCc
Confidence 888654432100 011112222222 566777777653 5899999887654331011 1111111222222677
Q ss_pred EEEEeccCCCCCCCeEEEEECCCCe
Q 036185 507 LGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 507 l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+++.|... .....+.+||+.+..
T Consensus 234 ~l~~g~~~--~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 234 ILTTGFSR--MSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEECT--TCCEEEEEEETTBCS
T ss_pred EEEEeccC--CCCceEEEEcCcccc
Confidence 77777210 123478899987743
No 445
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=89.69 E-value=0.39 Score=51.40 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=64.7
Q ss_pred cCCCCEEEEecC------cccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccCCCCCccE
Q 036185 893 DCKDEVIVDLFA------GIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTAPKGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~------G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~~~~~~D~ 966 (1057)
+..|.+||||+| --|.+.+.-. ......|+++|++|-.. ..+ .+++||+.......++|+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~VLr~~-~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~~~~k~DL 172 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTAVLRQW-LPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVHTANKWDL 172 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHHHHHHH-SCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEEESSCEEE
T ss_pred ecCCCEEEeCCCCCCCCCCCcHHHHHHh-CCCCcEEEEeeCccccc-----------CCC--eEEEccccccccCCCCCE
Confidence 456999999998 5577543322 11223899999998431 122 459999877665678999
Q ss_pred EEECCCCCCh-----------hH----HHHHHHHhhCCCcEEEEEcccccc
Q 036185 967 VCLGLIPTSE-----------NS----WVTAVQALRSEGGTLHVHGNVKDS 1002 (1057)
Q Consensus 967 Vil~~~P~~~-----------~~----~~~a~~~l~~~gg~l~~~~~~~~~ 1002 (1057)
|+-|.-|... .. +.-|...|+ +||-+.+=-|..+.
T Consensus 173 VISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lk-pGGsFvVKVFQGsg 222 (344)
T 3r24_A 173 IISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLA-LGGSIAVKITEHSW 222 (344)
T ss_dssp EEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEE-EEEEEEEEECSSSC
T ss_pred EEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCc-CCCEEEEEEecCCC
Confidence 9999877431 12 333455566 69999999888776
No 446
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.64 E-value=6.6 Score=41.84 Aligned_cols=197 Identities=11% Similarity=0.080 Sum_probs=90.7
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-C---CEEEEEcccCCCCCCCCcEEEEECC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-G---DHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~---~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
.+++.|+.++ .+.++|+.++.|..+... ......-.++.. . +.+++.|+.++ .+.+||+.
T Consensus 68 ~~l~s~s~D~--------~v~iWd~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~g~~l~s~s~d~------~v~~wd~~ 131 (297)
T 2pm7_B 68 TILASCSYDG--------KVMIWKEENGRWSQIAVH--AVHSASVNSVQWAPHEYGPMLLVASSDG------KVSVVEFK 131 (297)
T ss_dssp SEEEEEETTT--------EEEEEEBSSSCBCCCEEE--CCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEEBC
T ss_pred CEEEEEcCCC--------EEEEEEcCCCceEEEEEe--ecCCCceeEEEeCcCCCCcEEEEEECCC------cEEEEEec
Confidence 4777887654 467788877766433211 111111122222 1 45666776654 57788876
Q ss_pred CCc-EEEeeccCCCCCcccceEEEEE--------------CCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCCC
Q 036185 379 KSK-WTLLECSGSVFQPRHRHAAAVI--------------GSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGEG 441 (1057)
Q Consensus 379 t~~-W~~~~~~g~~p~~R~~hsa~~~--------------~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~~ 441 (1057)
+.. +......+.. ..-.+.+.. ++++++.|+.++. +.+||..+.. |........
T Consensus 132 ~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~-----v~lwd~~~~~~~~~~~~~l~~- 202 (297)
T 2pm7_B 132 ENGTTSPIIIDAHA---IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL-----VKIWKYNSDAQTYVLESTLEG- 202 (297)
T ss_dssp SSSCBCCEEEECCS---SCEEEEEECCCC------------CCEEEEEETTSC-----EEEEEEETTTTEEEEEEEECC-
T ss_pred CCCceeeeeeeccc---CccceEeecCCcccccccCCCCCCcceEEEEcCCCc-----EEEEEEcCCCceEEEEEEecC-
Confidence 542 2111100100 000111111 1357777777653 6667765533 544432110
Q ss_pred CCCcceeEEEEEC----CEEEEEecCCCCcccCcEEEEECCC--CeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccC
Q 036185 442 PCARHSHSMLAYG----SRLYMFGGYNGEKALGDLYTFDVHA--CLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCP 514 (1057)
Q Consensus 442 P~~r~~~s~~~~~----~~lyv~GG~~~~~~~~~l~~yd~~t--~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~ 514 (1057)
....-.+++... +.+++.|+.++ .+..+|+.+ ..|........ .....-.+++.. ++.+++.||.+
T Consensus 203 -H~~~V~~v~~sp~~~~~~~las~s~D~-----~v~iWd~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~g~~las~~~D 275 (297)
T 2pm7_B 203 -HSDWVRDVAWSPTVLLRSYMASVSQDR-----TCIIWTQDNEQGPWKKTLLKEE-KFPDVLWRASWSLSGNVLALSGGD 275 (297)
T ss_dssp -CSSCEEEEEECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCEEEESSSS-CCSSCEEEEEECSSSCCEEEEETT
T ss_pred -CCCceEEEEECCCCCCceEEEEEECCC-----cEEEEEeCCCCCccceeeeecc-cCCCcEEEEEECCCCCEEEEEcCC
Confidence 011112222222 36777887765 366777665 34554211101 111111222222 56677777743
Q ss_pred CCCCCCeEEEEECC-CCeEEEee
Q 036185 515 VRQNYQELSLLDLQ-LHIWKHLK 536 (1057)
Q Consensus 515 ~~~~~~~i~~yd~~-~~~W~~v~ 536 (1057)
+ .+.+++.. ...|..+.
T Consensus 276 ~-----~v~lw~~~~~g~w~~~~ 293 (297)
T 2pm7_B 276 N-----KVTLWKENLEGKWEPAG 293 (297)
T ss_dssp S-----CEEEEEECTTSCEEEC-
T ss_pred C-----cEEEEEECCCCcEEecc
Confidence 2 45556654 45788765
No 447
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.50 E-value=1.2 Score=55.19 Aligned_cols=107 Identities=7% Similarity=0.096 Sum_probs=63.4
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE--C--CEEEEEcccCCCcccceEEEEECC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI--G--SKIYVFGGLNNDTIFSSLHVLDTD 428 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~--~--~~iyv~GG~~~~~~~~~v~~yD~~ 428 (1057)
++..++.||.++ .+.+||..+.++..+... ......-.++.+ + +..++.|+.++. +.+||+.
T Consensus 20 dg~~latg~~dg------~I~vwd~~~~~~~~~~~l---~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~-----I~vwd~~ 85 (753)
T 3jro_A 20 YGKRLATCSSDK------TIKIFEVEGETHKLIDTL---TGHEGPVWRVDWAHPKFGTILASCSYDGK-----VLIWKEE 85 (753)
T ss_dssp SSCCEEEEETTT------EEEEEEEETTEEEEEEEE---CCCSSCEEEEEECCTTSCSEEEEEETTSC-----EEEEEEE
T ss_pred CCCeEEEEECCC------cEEEEecCCCCCccceec---cCCcCceEEEEecCCCCCCEEEEEeCCCe-----EEEEECC
Confidence 345566776654 688888887777766522 111222222333 3 667888887654 8899999
Q ss_pred CCcEEEeecCCCCCCCcceeEEEEE-C--CEEEEEecCCCCcccCcEEEEECCCC
Q 036185 429 TLQWKELLINGEGPCARHSHSMLAY-G--SRLYMFGGYNGEKALGDLYTFDVHAC 480 (1057)
Q Consensus 429 t~~W~~~~~~g~~P~~r~~~s~~~~-~--~~lyv~GG~~~~~~~~~l~~yd~~t~ 480 (1057)
++.|..+...... ...-.++... + +.+++.|+.++ .+..||+.+.
T Consensus 86 ~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 86 NGRWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp TTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred CCcccccccccCC--CCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 9888776553211 1112222222 2 56788887654 4788888765
No 448
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=89.50 E-value=0.46 Score=58.40 Aligned_cols=147 Identities=16% Similarity=0.103 Sum_probs=83.0
Q ss_pred eCCEEEEEecceeEeeCCCHHHHHHHh------------hccCCCCEEEEecCcccHhHHHHHHhC----------C--C
Q 036185 864 ENGILYSFDATKCMFSWGNLSEKLRMA------------RLDCKDEVIVDLFAGIGYFVLPFLVRA----------K--A 919 (1057)
Q Consensus 864 e~gi~~~~d~~~~~f~~~~~~er~r~~------------~~~~~g~~VlDlf~G~G~fsl~~a~~~----------~--a 919 (1057)
++|..|.-....+||+..+..+-.+-+ ..-.+.-+|+|++-|+|+-.+.++..- . .
T Consensus 15 ~~~~~~s~~f~d~y~s~~~~~~e~~~~f~~~~~l~~~~~~~~~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~ 94 (689)
T 3pvc_A 15 EQGTPVSEQFGDIYFSNEDGLEETHHVFLKGNGFPARFASHPQQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRR 94 (689)
T ss_dssp --------------CCSTTSHHHHHHHTTTTTTTTHHHHHCCSSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCE
T ss_pred CCCcccCcccCCcccCCcCHHHhhHhhccccCCHHHHHhhCCCCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCce
Confidence 456666666667788765433222111 111234589999999999998886431 1 1
Q ss_pred cEEEEEecCHHHHHHHHHHHHH------------c-------C-----CCc---cEEEEeCCccccCC------CCCccE
Q 036185 920 RLVYACEWNPCAVEALKHNLQA------------N-------S-----VSD---HCIVLEGDNRFTAP------KGVANR 966 (1057)
Q Consensus 920 ~~V~avD~n~~ai~~~~~N~~~------------N-------~-----~~~---~v~~~~~D~~~~~~------~~~~D~ 966 (1057)
-+++++|..|-..+.+++-+.. + + +++ .++++.||+.+.++ ...+|.
T Consensus 95 l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da 174 (689)
T 3pvc_A 95 LHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDA 174 (689)
T ss_dssp EEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEE
T ss_pred EEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeE
Confidence 4699999977666666552211 1 1 111 56789999998876 246999
Q ss_pred EEECCCCCC--------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCc
Q 036185 967 VCLGLIPTS--------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHR 1025 (1057)
Q Consensus 967 Vil~~~P~~--------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 1025 (1057)
+++|++ ++ ..++....++++ +||.+..|.+.. .+++...+.|+.
T Consensus 175 ~flD~f-~p~~np~~w~~~~~~~l~~~~~-~g~~~~t~~~~~-------------~vr~~l~~aGf~ 226 (689)
T 3pvc_A 175 WFLDGF-APAKNPDMWNEQLFNAMARMTR-PGGTFSTFTAAG-------------FVRRGLQQAGFN 226 (689)
T ss_dssp EEECSS-CC--CCTTCSHHHHHHHHHHEE-EEEEEEESCCCH-------------HHHHHHHHTTCE
T ss_pred EEECCC-CCCCChhhhhHHHHHHHHHHhC-CCCEEEeccCcH-------------HHHHHHHhCCeE
Confidence 999973 22 344555555555 799888887753 345556677875
No 449
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.41 E-value=18 Score=37.87 Aligned_cols=148 Identities=9% Similarity=0.070 Sum_probs=74.0
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcE
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQW 432 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (1057)
++..++.|+.++ .+.+||.... -..+. ..........+..-++. ++.|+.++ .+..||+.+.+-
T Consensus 154 ~~~~l~~~~~d~------~i~i~d~~~~-~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASADK------TIKLWQNDKV-IKTFS---GIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEETTS------CEEEEETTEE-EEEEC---SSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCCE
T ss_pred CCCEEEEEECCC------CEEEEecCce-EEEEe---ccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchhh
Confidence 556667776654 5888883221 11221 11111222222233666 66676554 488999987654
Q ss_pred EEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEe
Q 036185 433 KELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFG 511 (1057)
Q Consensus 433 ~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~G 511 (1057)
...-.. . ...-.+++...+..++.|+.++ .+..||+.+......-.. +... -.+++.. ++. ++.|
T Consensus 218 ~~~~~~---~-~~~i~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~---~~~~-i~~~~~~~~~~-~~~~ 283 (313)
T 3odt_A 218 LRTYEG---H-ESFVYCIKLLPNGDIVSCGEDR-----TVRIWSKENGSLKQVITL---PAIS-IWSVDCMSNGD-IIVG 283 (313)
T ss_dssp EEEEEC---C-SSCEEEEEECTTSCEEEEETTS-----EEEEECTTTCCEEEEEEC---SSSC-EEEEEECTTSC-EEEE
T ss_pred hhhhhc---C-CceEEEEEEecCCCEEEEecCC-----EEEEEECCCCceeEEEec---cCce-EEEEEEccCCC-EEEE
Confidence 332211 1 1112233333232456666543 488999988765543211 1111 1222222 455 4556
Q ss_pred ccCCCCCCCeEEEEECCCCeEEEe
Q 036185 512 GCPVRQNYQELSLLDLQLHIWKHL 535 (1057)
Q Consensus 512 G~~~~~~~~~i~~yd~~~~~W~~v 535 (1057)
+. ...+.+||+.+.+|...
T Consensus 284 ~~-----dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 284 SS-----DNLVRIFSQEKSRWASE 302 (313)
T ss_dssp ET-----TSCEEEEESCGGGCCC-
T ss_pred eC-----CCcEEEEeCCCCceeeh
Confidence 63 23689999988776543
No 450
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.31 E-value=14 Score=44.27 Aligned_cols=118 Identities=14% Similarity=0.159 Sum_probs=64.9
Q ss_pred EEEEEcccCCCCCCcccccEEEEeC-CCCc--EEEeccCCC---CCCc---cccEEEE--ECCE----EEEEcccCCCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDP-LQGT--IKAIHTEGS---PSPR---LGHTSSL--IGDH----MFIIGGRADPLN 367 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~-~t~~--W~~l~~~~~---P~~R---~~hs~v~--~~~~----Iyv~GG~~~~~~ 367 (1057)
.||+.+.+ .+.++.||. .+++ |+.-..... +.++ ...+.++ .+++ ||+...
T Consensus 64 ~vyv~~~~--------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~------ 129 (599)
T 1w6s_A 64 KMYIHTSF--------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL------ 129 (599)
T ss_dssp EEEEECST--------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT------
T ss_pred EEEEEeCC--------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC------
Confidence 48887652 246899999 7765 775331110 0011 1123344 5666 877532
Q ss_pred CCCcEEEEECCCCc--EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCc--EEEee
Q 036185 368 ILSDVWVFNMAKSK--WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELL 436 (1057)
Q Consensus 368 ~~~~v~~yd~~t~~--W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~ 436 (1057)
...++.+|..|.+ |+.-... .........+.++.++.+|+-.+.........++.||..|.+ |+.-.
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~-~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 -DGNVAALNAETGETVWKVENSD-IKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp -TSEEEEEETTTCCEEEEEECCC-GGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred -CCEEEEEECCCCCEEEeecCCC-CCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2469999998875 8754211 000011223345578888764322111124579999998875 87654
No 451
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.29 E-value=18 Score=40.49 Aligned_cols=185 Identities=12% Similarity=0.073 Sum_probs=90.0
Q ss_pred cEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccce
Q 036185 321 DLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRH 398 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~h 398 (1057)
.++++|..+++...+- .+......-.++.+ ++..++.|+.++ .+.+||+.+++-.... .......
T Consensus 126 tV~lWd~~tg~~~~~~--~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~~-----~~h~~~v 192 (420)
T 4gga_A 126 SVYLWSASSGDILQLL--QMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRNM-----TSHSARV 192 (420)
T ss_dssp EEEEEETTTCCEEEEE--ECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEE-----CCCSSCE
T ss_pred EEEEEECCCCCEEEEE--EecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEEE-----eCCCCce
Confidence 5888898888765543 12222222233333 456777887654 6899999887643332 1111223
Q ss_pred EEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECC
Q 036185 399 AAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVH 478 (1057)
Q Consensus 399 sa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~ 478 (1057)
.+...++.+++.|+.++ .+..+|..+.........+ ............++..++.|+.++ .+.++|..
T Consensus 193 ~~~s~~~~~l~sgs~d~-----~i~~~d~~~~~~~~~~~~~--h~~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~ 260 (420)
T 4gga_A 193 GSLSWNSYILSSGSRSG-----HIHHHDVRVAEHHVATLSG--HSQEVCGLRWAPDGRHLASGGNDN-----LVNVWPSA 260 (420)
T ss_dssp EEEEEETTEEEEEETTS-----EEEEEETTSSSCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTS-----CEEEEESS
T ss_pred EEEeeCCCEEEEEeCCC-----ceeEeeecccceeeEEecc--cccceeeeeecCCCCeeeeeeccc-----cceEEeec
Confidence 34445677777777654 3677776654433222111 111111112222455666666554 36677766
Q ss_pred CCeE--EEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEEEe
Q 036185 479 ACLW--KKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWKHL 535 (1057)
Q Consensus 479 t~~W--~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v 535 (1057)
+..- ..+........+ -.+.+.. +..+++.||... -..+.++|+.+..-...
T Consensus 261 ~~~~~~~~~~~~~~~~~~--V~~~~~~p~~~~~la~~~gs~---D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGA--VKAVAWCPWQSNVLATGGGTS---DRHIRIWNVCSGACLSA 316 (420)
T ss_dssp CCSSCSCCSEEECCCSSC--EEEEEECTTCTTEEEEEECTT---TCEEEEEETTTTEEEEE
T ss_pred cccccceeeeeecccCCc--eeeeeeCCCcccEEEEEeecC---CCEEEEEeCCcccccee
Confidence 5421 111000011111 1112221 444555543221 23688999988765543
No 452
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=89.25 E-value=28 Score=37.80 Aligned_cols=73 Identities=8% Similarity=0.062 Sum_probs=38.4
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CC-EEEEEeccCCCCCCCeEEEEEC--CCC
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KN-YLGLFGGCPVRQNYQELSLLDL--QLH 530 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~-~l~i~GG~~~~~~~~~i~~yd~--~~~ 530 (1057)
.+|+.+.. .+.+.+||+.+..+..+......+........+.+ ++ .||+.... ..+.+.+|++ .+.
T Consensus 224 ~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~----~~~~i~v~~~~~~~g 294 (361)
T 3scy_A 224 FAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL----KADGVAIFKVDETNG 294 (361)
T ss_dssp EEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS----SSCEEEEEEECTTTC
T ss_pred EEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC----CCCEEEEEEEcCCCC
Confidence 46666432 24588899888877665433333332222233333 44 46554321 0245666666 567
Q ss_pred eEEEeec
Q 036185 531 IWKHLKL 537 (1057)
Q Consensus 531 ~W~~v~~ 537 (1057)
+++.+..
T Consensus 295 ~~~~~~~ 301 (361)
T 3scy_A 295 TLTKVGY 301 (361)
T ss_dssp CEEEEEE
T ss_pred cEEEeeE
Confidence 7776653
No 453
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.17 E-value=26 Score=42.89 Aligned_cols=188 Identities=9% Similarity=0.027 Sum_probs=96.9
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC-
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS- 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~- 380 (1057)
..+++||.+ ..+.+||..+++....-. ..+ ..-.+++.. ++..++.|+.++ .+.+||..++
T Consensus 68 ~~l~~~~~d--------g~i~vw~~~~~~~~~~~~-~~~--~~v~~~~~s~~~~~l~~~~~dg------~i~vw~~~~~~ 130 (814)
T 3mkq_A 68 NWIIVGSDD--------FRIRVFNYNTGEKVVDFE-AHP--DYIRSIAVHPTKPYVLSGSDDL------TVKLWNWENNW 130 (814)
T ss_dssp TEEEEEETT--------SEEEEEETTTCCEEEEEE-CCS--SCEEEEEECSSSSEEEEEETTS------EEEEEEGGGTS
T ss_pred CEEEEEeCC--------CeEEEEECCCCcEEEEEe-cCC--CCEEEEEEeCCCCEEEEEcCCC------EEEEEECCCCc
Confidence 577777753 358889988876543221 111 111122222 445556666543 6889998776
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE---CC
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY---GS 455 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~---~~ 455 (1057)
.....- .+ ....-.+++.. ++..++.|+.++ .+..||+.+..-...... .....-.++... ++
T Consensus 131 ~~~~~~-~~---~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 131 ALEQTF-EG---HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQSTPNFTLTT---GQERGVNYVDYYPLPDK 198 (814)
T ss_dssp EEEEEE-EC---CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSSCSEEEEC---CCTTCCCEEEECCSTTC
T ss_pred eEEEEE-cC---CCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCcceeEEec---CCCCCEEEEEEEECCCC
Confidence 332221 11 11112233333 345777777654 488899866543222211 111112223322 56
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
..++.|+.++ .+..||+.+..-...-. + .. ....++.+ ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 199 ~~l~~~~~dg-----~i~~~d~~~~~~~~~~~-~--~~--~~v~~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 199 PYMITASDDL-----TIKIWDYQTKSCVATLE-G--HM--SNVSFAVFHPTLPIIISGSED-----GTLKIWNSSTYKVE 263 (814)
T ss_dssp CEEEEECTTS-----EEEEEETTTTEEEEEEE-C--CS--SCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCSEE
T ss_pred CEEEEEeCCC-----EEEEEECCCCcEEEEEc-C--CC--CCEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEE
Confidence 6777777654 58899988776433211 1 11 11222223 45577777743 36888998876544
Q ss_pred E
Q 036185 534 H 534 (1057)
Q Consensus 534 ~ 534 (1057)
.
T Consensus 264 ~ 264 (814)
T 3mkq_A 264 K 264 (814)
T ss_dssp E
T ss_pred E
Confidence 3
No 454
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.08 E-value=17 Score=39.81 Aligned_cols=189 Identities=12% Similarity=0.073 Sum_probs=92.6
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
..++.||.++ .+.++|..+......- ..+.. .-.+++.. ++..++.||.++ .+.+|+.....
T Consensus 77 ~~l~s~s~Dg--------~v~vWd~~~~~~~~~~--~~~~~-~v~~~~~sp~g~~lasg~~d~------~i~v~~~~~~~ 139 (354)
T 2pbi_B 77 RRIVSSSQDG--------KVIVWDSFTTNKEHAV--TMPCT-WVMACAYAPSGCAIACGGLDN------KCSVYPLTFDK 139 (354)
T ss_dssp SEEEEEETTS--------EEEEEETTTCCEEEEE--ECSSS-CCCEEEECTTSSEEEEESTTS------EEEEEECCCCT
T ss_pred CEEEEEeCCC--------eEEEEECCCCCcceEE--ecCCC-CEEEEEECCCCCEEEEeeCCC------CEEEEEEeccc
Confidence 5777887654 4677787766543322 11211 11222222 556777887654 56777764321
Q ss_pred EEEeec-cCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE--E-CC
Q 036185 382 WTLLEC-SGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA--Y-GS 455 (1057)
Q Consensus 382 W~~~~~-~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~--~-~~ 455 (1057)
-..... ..........-.++.+ ++..++.|+.++ .+..||+.+.+....-. +. ... -.++.. . ++
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~-----~v~lwd~~~~~~~~~~~-~h-~~~--v~~~~~~~~~~g 210 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG-----TCALWDVESGQLLQSFH-GH-GAD--VLCLDLAPSETG 210 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEEEEEE-CC-SSC--EEEEEECCCSSC
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEc-CC-CCC--eEEEEEEeCCCC
Confidence 000000 0000000001122222 344555665543 48889998876533221 00 111 111222 1 34
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
..++.|+.++ .+..||+.+......-. . ....-.++.+ ++..++.|+.+ ..+.+||+.+..-
T Consensus 211 ~~l~sgs~Dg-----~v~~wd~~~~~~~~~~~--~---h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 211 NTFVSGGCDK-----KAMVWDMRSGQCVQAFE--T---HESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADRE 274 (354)
T ss_dssp CEEEEEETTS-----CEEEEETTTCCEEEEEC--C---CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CEEEEEeCCC-----eEEEEECCCCcEEEEec--C---CCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 6788888765 48899998877544311 1 1111222333 46677777743 3688899887654
No 455
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.93 E-value=0.84 Score=50.46 Aligned_cols=150 Identities=12% Similarity=0.069 Sum_probs=71.4
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCC
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTL 430 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~ 430 (1057)
++.+++.|+.++ .+.+||+.++.|..+.. .......-.++.+ ++++++.|+.++ .+.+||+.+.
T Consensus 22 ~g~~l~~~~~d~------~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd~~~~ 87 (377)
T 3dwl_C 22 QRTEFVTTTATN------QVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQDR-----NAYVYEKRPD 87 (377)
T ss_dssp SSSEEECCCSSS------CBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETTS-----SEEEC-----
T ss_pred CCCEEEEecCCC------EEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCCC-----eEEEEEcCCC
Confidence 455666766543 57788888888877652 2222222222233 456777777665 3888888877
Q ss_pred c-EEEeecCCCCCCCcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCe-EEEeeccCCCCCCceeeEEEEE-CCE
Q 036185 431 Q-WKELLINGEGPCARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACL-WKKEDIAARSPHARFSHTMFLY-KNY 506 (1057)
Q Consensus 431 ~-W~~~~~~g~~P~~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~-W~~v~~~~~~P~~R~~hs~~~~-~~~ 506 (1057)
. |........ ....-.++... +++.++.|+.++ .+..||+.+.. |........ +....-.+++.. ++.
T Consensus 88 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 88 GTWKQTLVLLR--LNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNV 159 (377)
T ss_dssp -CCCCEEECCC--CSSCEEEEECCTTSSCCEEEESSS-----CEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSS
T ss_pred CceeeeeEecc--cCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCC
Confidence 6 544332211 11111222222 456777777654 37777777654 322111111 111112222222 566
Q ss_pred EEEEeccCCCCCCCeEEEEECCC
Q 036185 507 LGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 507 l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
+++.|+.+ ..+.+||+.+
T Consensus 160 ~l~~~~~d-----~~i~iwd~~~ 177 (377)
T 3dwl_C 160 LLAAGCAD-----RKAYVLSAYV 177 (377)
T ss_dssp EEEEEESS-----SCEEEEEECC
T ss_pred EEEEEeCC-----CEEEEEEEEe
Confidence 77777743 3578888754
No 456
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=88.91 E-value=24 Score=39.20 Aligned_cols=146 Identities=14% Similarity=0.114 Sum_probs=73.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
+.++.|+.++ .+.++|..+.+....- ... ...-.+++.. ++..++.|+.++ .+.+||+.+..
T Consensus 136 ~~l~s~~~d~--------~i~iwd~~~~~~~~~~--~~h-~~~v~~~~~~p~~~~l~s~s~d~------~v~iwd~~~~~ 198 (393)
T 1erj_A 136 KFLATGAEDR--------LIRIWDIENRKIVMIL--QGH-EQDIYSLDYFPSGDKLVSGSGDR------TVRIWDLRTGQ 198 (393)
T ss_dssp SEEEEEETTS--------CEEEEETTTTEEEEEE--CCC-SSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTE
T ss_pred CEEEEEcCCC--------eEEEEECCCCcEEEEE--ccC-CCCEEEEEEcCCCCEEEEecCCC------cEEEEECCCCe
Confidence 4677777543 5788888877644321 111 1111222222 445566666543 68899998876
Q ss_pred EEEeeccCCCCCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCC---CCCcceeEEEEE-CC
Q 036185 382 WTLLECSGSVFQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEG---PCARHSHSMLAY-GS 455 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~---P~~r~~~s~~~~-~~ 455 (1057)
....-.. ...-.+.+.. ++++++.|+.++. +.+||+.+......-..... .....-.+++.. ++
T Consensus 199 ~~~~~~~-----~~~v~~~~~~~~~~~~l~~~s~d~~-----v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 199 CSLTLSI-----EDGVTTVAVSPGDGKYIAAGSLDRA-----VRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp EEEEEEC-----SSCEEEEEECSTTCCEEEEEETTSC-----EEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred eEEEEEc-----CCCcEEEEEECCCCCEEEEEcCCCc-----EEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 5433211 1111222222 5678888877654 88899887764332110000 000111122222 45
Q ss_pred EEEEEecCCCCcccCcEEEEECCCC
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHAC 480 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~ 480 (1057)
+.++.|+.++ .+..||+.+.
T Consensus 269 ~~l~s~s~d~-----~v~~wd~~~~ 288 (393)
T 1erj_A 269 QSVVSGSLDR-----SVKLWNLQNA 288 (393)
T ss_dssp SEEEEEETTS-----EEEEEEC---
T ss_pred CEEEEEeCCC-----EEEEEECCCC
Confidence 6777777654 4777777653
No 457
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.75 E-value=24 Score=37.73 Aligned_cols=225 Identities=10% Similarity=0.050 Sum_probs=0.0
Q ss_pred CcEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 301 DSQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 301 ~~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
++.+++.|+.++ .+.+||+.+.+-...- .............- ++.+++.|+.++ .+.+||+.+
T Consensus 84 ~~~~l~~~~~dg--------~i~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~ 147 (366)
T 3k26_A 84 SHPLLAVAGSRG--------IIRIINPITMQCIKHY--VGHGNAINELKFHPRDPNLLLSVSKDH------ALRLWNIQT 147 (366)
T ss_dssp CCEEEEEEETTC--------EEEEECTTTCCEEEEE--ESCCSCEEEEEECSSCTTEEEEEETTS------CEEEEETTT
T ss_pred CCCEEEEecCCC--------EEEEEEchhceEeeee--cCCCCcEEEEEECCCCCCEEEEEeCCC------eEEEEEeec
Q ss_pred CcEEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCC-----------------------------
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTL----------------------------- 430 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~----------------------------- 430 (1057)
.+....-..-......-...+..-++..++.|+.++. +.+||+.+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHS-----LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP 222 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSC-----EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCC-----EEEEECCCCccccccceeEEecCCCCcccccceeeccC
Q ss_pred cEEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCC--------------eEEEeeccCCCCCCce
Q 036185 431 QWKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHAC--------------LWKKEDIAARSPHARF 496 (1057)
Q Consensus 431 ~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~--------------~W~~v~~~~~~P~~R~ 496 (1057)
.|..... ...+....+.. +.+++.|+.++. +..||+.+. ..... -.......
T Consensus 223 ~~~~~~~---~~~~v~~~~~~---~~~l~~~~~d~~-----i~~wd~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v 288 (366)
T 3k26_A 223 DFSTRDI---HRNYVDCVRWL---GDLILSKSCENA-----IVCWKPGKMEDDIDKIKPSESNVTILGR---FDYSQCDI 288 (366)
T ss_dssp SEEECSS---CSSCCCEEEEE---TTEEEEECSSSE-----EEEEEESSTTCCGGGCCTTCCCEEEEEE---EECSSCCS
T ss_pred ccccccC---CcceEEEEEEc---CCEEEEEecCCE-----EEEEeCCCccccccccccCCcchheecc---ccccCCcE
Q ss_pred eeEEEEEC--CEEEEEeccCCCCCCCeEEEEECCCCeE---EEeeccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 497 SHTMFLYK--NYLGLFGGCPVRQNYQELSLLDLQLHIW---KHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 497 ~hs~~~~~--~~l~i~GG~~~~~~~~~i~~yd~~~~~W---~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
...+...+ +.+++.|+ ....+.+||+.+... .................+...++++++.||.+.
T Consensus 289 ~~~~~s~~~~~~~l~~~~-----~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 357 (366)
T 3k26_A 289 WYMRFSMDFWQKMLALGN-----QVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDA 357 (366)
T ss_dssp SCCCCEECTTSSEEEEEC-----TTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEcCCCCCcEEEEEe-----cCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCC
No 458
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=88.65 E-value=0.38 Score=54.86 Aligned_cols=100 Identities=14% Similarity=0.034 Sum_probs=67.0
Q ss_pred cCCCCEEEEecCcc-cHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCc-cccC----CCCCccE
Q 036185 893 DCKDEVIVDLFAGI-GYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDN-RFTA----PKGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G~-G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~-~~~~----~~~~~D~ 966 (1057)
+.+|++||-.+||. |.+++.+|+..|+.+|+++|.+++.++.+++ .|. +-+..-..|. .+.+ ....+|+
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~~g~g~Dv 257 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQILGKPEVDC 257 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHhCCCCCCE
Confidence 57899999998864 8888888877788789999999999888764 344 1111111222 1111 1235888
Q ss_pred EEECCCCCC-------------hhHHHHHHHHhhCCCcEEEEEccc
Q 036185 967 VCLGLIPTS-------------ENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 967 Vil~~~P~~-------------~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|+-.. ... ...+..+++.|+ ++|.+.+....
T Consensus 258 vid~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~-~gG~iv~~G~~ 301 (398)
T 2dph_A 258 GVDAV-GFEAHGLGDEANTETPNGALNSLFDVVR-AGGAIGIPGIY 301 (398)
T ss_dssp EEECS-CTTCBCSGGGTTSBCTTHHHHHHHHHEE-EEEEEECCSCC
T ss_pred EEECC-CCccccccccccccccHHHHHHHHHHHh-cCCEEEEeccc
Confidence 87544 432 136888999998 68888777654
No 459
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=88.52 E-value=23 Score=37.97 Aligned_cols=226 Identities=11% Similarity=0.050 Sum_probs=102.4
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
..++.|+.++ .+.+||+.+.+....- ..+. .-.++... ++..++.++.+. ......+.+||..+..
T Consensus 87 ~~l~s~~~dg--------~i~iwd~~~~~~~~~~--~~~~--~v~~~~~~~~~~~l~~~~~~~-~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 87 KYCVTGSADY--------SIKLWDVSNGQCVATW--KSPV--PVKRVEFSPCGNYFLAILDNV-MKNPGSINIYEIERDS 153 (369)
T ss_dssp SEEEEEETTT--------EEEEEETTTCCEEEEE--ECSS--CEEEEEECTTSSEEEEEECCB-TTBCCEEEEEEEEECT
T ss_pred CEEEEEeCCC--------eEEEEECCCCcEEEEe--ecCC--CeEEEEEccCCCEEEEecCCc-cCCCCEEEEEEecCCc
Confidence 4666776443 5888898877654432 1111 11222222 445555555431 1223467777765432
Q ss_pred ----EEEeeccC--CC--CCcccceEEEEE--CCEEEEEcccCCCcccceEEEEECCC-CcEE-EeecCCCCCCCcceeE
Q 036185 382 ----WTLLECSG--SV--FQPRHRHAAAVI--GSKIYVFGGLNNDTIFSSLHVLDTDT-LQWK-ELLINGEGPCARHSHS 449 (1057)
Q Consensus 382 ----W~~~~~~g--~~--p~~R~~hsa~~~--~~~iyv~GG~~~~~~~~~v~~yD~~t-~~W~-~~~~~g~~P~~r~~~s 449 (1057)
+....... .. ........++.+ +++.++.|+.++ .+..||+.+ .... .+... ...-.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~-----~~~v~~ 223 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG-----KISKYDVSNNYEYVDSIDLH-----EKSISD 223 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS-----EEEEEETTTTTEEEEEEECC-----SSCEEE
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC-----EEEEEECCCCcEeEEEEecC-----CCceeE
Confidence 22221000 00 000002222222 455666776554 588999987 3322 22211 111122
Q ss_pred EEEE-CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCC---------C
Q 036185 450 MLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQ---------N 518 (1057)
Q Consensus 450 ~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~---------~ 518 (1057)
++.. ++..++.|+.++ .+..||+.+........ .+.+ ..+++.. ++..+++|+.+... .
T Consensus 224 ~~~~~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~---~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 293 (369)
T 3zwl_B 224 MQFSPDLTYFITSSRDT-----NSFLVDVSTLQVLKKYE---TDCP--LNTAVITPLKEFIILGGGQEAKDVTTTSANEG 293 (369)
T ss_dssp EEECTTSSEEEEEETTS-----EEEEEETTTCCEEEEEE---CSSC--EEEEEECSSSSEEEEEECCC------------
T ss_pred EEECCCCCEEEEecCCc-----eEEEEECCCCceeeeec---CCCC--ceeEEecCCCceEEEeecCCCceEEEEecCCC
Confidence 2222 556677776543 58899998876544321 1111 1122222 45555665533211 1
Q ss_pred CCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCC
Q 036185 519 YQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 519 ~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
...+.+||..+.+-...-... .......+...++++++.||.+
T Consensus 294 ~~~i~~~d~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~d 336 (369)
T 3zwl_B 294 KFEARFYHKIFEEEIGRVQGH---FGPLNTVAISPQGTSYASGGED 336 (369)
T ss_dssp -CEEEEEETTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEETT
T ss_pred cceeEEEecCCCcchhheecc---cCcEEEEEECCCCCEEEEEcCC
Confidence 226888888776533321111 1111112222256677777654
No 460
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.51 E-value=4.3 Score=44.88 Aligned_cols=183 Identities=10% Similarity=0.023 Sum_probs=91.7
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.++.|+.++ .+.++|+.+++....- ..... .-.+++.. ++.+++.||.++ .+.+||+.+.
T Consensus 152 ~~l~sgs~dg--------~v~iwd~~~~~~~~~~--~~h~~-~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~ 214 (357)
T 4g56_B 152 TQAVSGGKDF--------SVKVWDLSQKAVLKSY--NAHSS-EVNCVAACPGKDTIFLSCGEDG------RILLWDTRKP 214 (357)
T ss_dssp SEEEEEETTS--------CEEEEETTTTEEEEEE--CCCSS-CEEEEEECTTCSSCEEEEETTS------CEEECCTTSS
T ss_pred CEEEEEeCCC--------eEEEEECCCCcEEEEE--cCCCC-CEEEEEEccCCCceeeeeccCC------ceEEEECCCC
Confidence 4777777554 4778898877644321 11111 11122222 335777777654 5788888765
Q ss_pred cEEEeeccCCCCCcccceEEEEE---CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-C-C
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI---GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-G-S 455 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~---~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~-~ 455 (1057)
+-.... ..........++.+ ++.+++.|+.++. +.+||+.+.+-...-. + . ...-.+++.. + +
T Consensus 215 ~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-----i~~wd~~~~~~~~~~~-~--~-~~~v~~l~~sp~~~ 282 (357)
T 4g56_B 215 KPATRI---DFCASDTIPTSVTWHPEKDDTFACGDETGN-----VSLVNIKNPDSAQTSA-V--H-SQNITGLAYSYHSS 282 (357)
T ss_dssp SCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSSC-----EEEEESSCGGGCEEEC-C--C-SSCEEEEEECSSSS
T ss_pred ceeeee---eeccccccccchhhhhcccceEEEeecccc-----eeEEECCCCcEeEEEe-c--c-ceeEEEEEEcCCCC
Confidence 432211 11111111223333 3567777876653 7889987654222111 0 1 1111222222 3 3
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEE--ECCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFL--YKNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~--~~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
++++.|+.++ .+.+||..+.+.... .+ ....-.+++. .++.+++.||.++ .+.++|+.+
T Consensus 283 ~~lasgs~D~-----~i~iwd~~~~~~~~~--~~---H~~~V~~vafsP~d~~~l~s~s~Dg-----~v~iW~~~~ 343 (357)
T 4g56_B 283 PFLASISEDC-----TVAVLDADFSEVFRD--LS---HRDFVTGVAWSPLDHSKFTTVGWDH-----KVLHHHLPS 343 (357)
T ss_dssp CCEEEEETTS-----CEEEECTTSCEEEEE--CC---CSSCEEEEEECSSSTTEEEEEETTS-----CEEEEECC-
T ss_pred CEEEEEeCCC-----EEEEEECCCCcEeEE--CC---CCCCEEEEEEeCCCCCEEEEEcCCC-----eEEEEECCC
Confidence 5666777654 488899988765443 11 1111122222 2567778888543 467777644
No 461
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=88.47 E-value=0.53 Score=53.06 Aligned_cols=98 Identities=20% Similarity=0.104 Sum_probs=67.3
Q ss_pred ccCCCCEEEEecCcc-cHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC---CccccC---CCCCc
Q 036185 892 LDCKDEVIVDLFAGI-GYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG---DNRFTA---PKGVA 964 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G~-G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~---D~~~~~---~~~~~ 964 (1057)
.+.+|++||-.+||. |.+++.+|+..|+++|+++|.+++.++.+++ .|.+ .++.. |..+.+ ....+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----LGAT---HVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----HTCS---EEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCC---EEecCCccCHHHHHHHhcCCCC
Confidence 357899999998874 8888888877788789999999999988864 3443 12222 211111 11258
Q ss_pred cEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 965 NRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 965 D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|+|+-.. . ....+..+++.|+ ++|.+.+....
T Consensus 260 D~vid~~-g-~~~~~~~~~~~l~-~~G~iv~~G~~ 291 (371)
T 1f8f_A 260 NFALEST-G-SPEILKQGVDALG-ILGKIAVVGAP 291 (371)
T ss_dssp EEEEECS-C-CHHHHHHHHHTEE-EEEEEEECCCC
T ss_pred cEEEECC-C-CHHHHHHHHHHHh-cCCEEEEeCCC
Confidence 8876443 3 3456888899998 68888877654
No 462
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=88.47 E-value=0.49 Score=53.42 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=68.2
Q ss_pred ccCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEe---CCcccc------CCC
Q 036185 892 LDCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLE---GDNRFT------APK 961 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~---~D~~~~------~~~ 961 (1057)
.+.+|++||-.++| +|.+++.+|+..|+.+|+++|.+++..+.+++ .|.+ .++. .|..+. +..
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE----VGAT---ATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH----HTCS---EEECTTSSCHHHHHHSTTSSST
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----cCCC---EEECCCCcCHHHHHHhhhhccC
Confidence 35789999988775 47788888877888789999999999988776 4554 2222 222111 112
Q ss_pred CCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 962 GVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 962 ~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
+.+|+|+-.. . ....+..++++|+ +||.+.+.....
T Consensus 252 gg~Dvvid~~-G-~~~~~~~~~~~l~-~~G~vv~~G~~~ 287 (370)
T 4ej6_A 252 GGVDVVIECA-G-VAETVKQSTRLAK-AGGTVVILGVLP 287 (370)
T ss_dssp TCEEEEEECS-C-CHHHHHHHHHHEE-EEEEEEECSCCC
T ss_pred CCCCEEEECC-C-CHHHHHHHHHHhc-cCCEEEEEeccC
Confidence 3688876433 2 2556888999998 689888887643
No 463
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=88.40 E-value=4.2 Score=47.02 Aligned_cols=182 Identities=21% Similarity=0.308 Sum_probs=98.1
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK 381 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~ 381 (1057)
+++|+|-| +..|.||..+++...-.-+.+| . --++....+++|+|-|. ..|+||..+++
T Consensus 159 ~~~yfFkG----------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~--------~y~rfd~~~~~ 217 (460)
T 1qhu_A 159 EGILFFQG----------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGN--------QFLRFNPVSGE 217 (460)
T ss_dssp SEEEEEET----------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETT--------EEEEECTTTCC
T ss_pred CeEEEEec----------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECC--------EEEEEcCccCc
Confidence 46888888 3579999988766543222333 2 34556667899999874 57888876543
Q ss_pred ------------EEEeeccC------------CCC---Ccc-cceEEEE-ECCEEEEEcccCCCcccceEEEEECCCCcE
Q 036185 382 ------------WTLLECSG------------SVF---QPR-HRHAAAV-IGSKIYVFGGLNNDTIFSSLHVLDTDTLQW 432 (1057)
Q Consensus 382 ------------W~~~~~~g------------~~p---~~R-~~hsa~~-~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W 432 (1057)
|..++..| ..| .|. ..-+++. .++++|+|-|. ..|++|.....+
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~-------~yWR~~~~~~~~ 290 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS-------HYWRLDTNRDGW 290 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT-------EEEECTTGGGCC
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC-------EEEEEecCCCCc
Confidence 22221111 000 111 1223333 36789998773 356666544333
Q ss_pred EEeecC---CCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEe-------e-ccCCCCCC--ce-ee
Q 036185 433 KELLIN---GEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKE-------D-IAARSPHA--RF-SH 498 (1057)
Q Consensus 433 ~~~~~~---g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v-------~-~~~~~P~~--R~-~h 498 (1057)
...... ..+|.. --++...++++|+|=| +..|+|+..+. .+.. . ..+ +|.. .. --
T Consensus 291 ~p~~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~g-~~~~~GyPK~I~~~lG-lp~~~~~~~ID 359 (460)
T 1qhu_A 291 HSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKGG-YTLVNGYPKRLEKELG-SPPVISLEAVD 359 (460)
T ss_dssp CCEEGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSBS-CEECTTCCEEHHHHHC-CCSSCCCSCCC
T ss_pred CccchhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCCC-ceecCCCCeEHHHhcc-CCCccccCccc
Confidence 221111 124433 2234445889999966 35888886531 2211 1 011 2222 11 12
Q ss_pred EEEEE--CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 499 TMFLY--KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 499 s~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
++... .+++|+|-| +..|.||...
T Consensus 360 AA~~~~~~~ktyfFkG-------~~ywryd~~~ 385 (460)
T 1qhu_A 360 AAFVCPGSSRLHIMAG-------RRLWWLDLKS 385 (460)
T ss_dssp EEECCTTCCEEEEEET-------TEEEEEEGGG
T ss_pred EEEEeCCCCEEEEEEC-------CEEEEEECCC
Confidence 22222 578999987 4789999874
No 464
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.38 E-value=12 Score=44.94 Aligned_cols=198 Identities=12% Similarity=-0.031 Sum_probs=107.3
Q ss_pred ccccEEEEeCCC------CcEEEec-cCCCCCCccccEEEE-ECCEEEEEcccCCCCC--CCCcEEEEECC-CC---cEE
Q 036185 318 RRNDLFLLDPLQ------GTIKAIH-TEGSPSPRLGHTSSL-IGDHMFIIGGRADPLN--ILSDVWVFNMA-KS---KWT 383 (1057)
Q Consensus 318 ~~~d~~~yd~~t------~~W~~l~-~~~~P~~R~~hs~v~-~~~~Iyv~GG~~~~~~--~~~~v~~yd~~-t~---~W~ 383 (1057)
...+++.+|+.+ +....+. .. .....+.+. -+++.+++...+.+.. -..++|++|.. +. ...
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDA----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSC----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred ceeEEEEEECCCCccccCCceeEEEecC----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 346899999988 6666553 11 111111222 2454444444332111 13589999998 56 444
Q ss_pred EeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCC-C--CCCcc-eeEEEEE-CCEE
Q 036185 384 LLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGE-G--PCARH-SHSMLAY-GSRL 457 (1057)
Q Consensus 384 ~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~-~--P~~r~-~~s~~~~-~~~l 457 (1057)
.+... . .......+.. ++++|+.+..++ ...++.+|+.+.+|..+..... . |.-.. ....+.. ++++
T Consensus 235 ~l~~~---~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 235 TLLGG---P-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEE---T-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred EeCCC---C-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEE
Confidence 44311 0 1112222222 667776665443 2469999998999988754211 0 11110 1123333 5677
Q ss_pred EEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEE-EEECCEEEEEeccCCCCCCCeEEEEECCCCeEEEee
Q 036185 458 YMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTM-FLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~-~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
++.+.. + ...+|.+|+.+.....+.. +.. ...+. ..-++.+++..+. .....++|.+|+.+.+.+.+.
T Consensus 308 ~~~~~~-~---~~~l~~~d~~~~~~~~l~~----~~~-~~~~~~s~~~~~~~~~~~~--~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 308 AVVHGK-G---AAVLGILDPESGELVDAAG----PWT-EWAATLTVSGTRAVGVAAS--PRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEEEBS-S---SCEEEEEETTTTEEEECCS----SCC-EEEEEEEEETTEEEEEEEE--TTEEEEEEEEETTTCCEEEEE
T ss_pred EEEEEc-C---ccEEEEEECCCCcEEEecC----CCC-eEEEEEecCCCEEEEEEcC--CCCCCEEEEEECCCCceEEee
Confidence 766654 2 4579999999888766521 111 12222 3446666665542 123457999999999888875
Q ss_pred c
Q 036185 537 L 537 (1057)
Q Consensus 537 ~ 537 (1057)
.
T Consensus 377 ~ 377 (662)
T 3azo_A 377 A 377 (662)
T ss_dssp S
T ss_pred c
Confidence 3
No 465
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=88.34 E-value=0.89 Score=50.91 Aligned_cols=97 Identities=20% Similarity=0.089 Sum_probs=67.4
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCC---cccc---CC---CC
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGD---NRFT---AP---KG 962 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D---~~~~---~~---~~ 962 (1057)
+.+|++||-.+|| +|.+++.+|+..|+++|+++|.+++..+.+++ .|.+ . ++..+ ..++ +. ..
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-~--vi~~~~~~~~~~~~~i~~~~~~ 241 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD-L--VLQISKESPQEIARKVEGQLGC 241 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS-E--EEECSSCCHHHHHHHHHHHHTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC-E--EEcCcccccchHHHHHHHHhCC
Confidence 5789999998886 48888888877888789999999998888764 4554 2 23222 1111 11 14
Q ss_pred CccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 963 VANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 963 ~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
.+|+|+-.. . ....+..++++|+ ++|.+......
T Consensus 242 g~D~vid~~-g-~~~~~~~~~~~l~-~~G~iv~~G~~ 275 (356)
T 1pl8_A 242 KPEVTIECT-G-AEASIQAGIYATR-SGGTLVLVGLG 275 (356)
T ss_dssp CCSEEEECS-C-CHHHHHHHHHHSC-TTCEEEECSCC
T ss_pred CCCEEEECC-C-ChHHHHHHHHHhc-CCCEEEEEecC
Confidence 589887544 3 3456788899998 68888887753
No 466
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.31 E-value=27 Score=37.23 Aligned_cols=202 Identities=9% Similarity=0.049 Sum_probs=100.1
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.||+.+-. .+.+++|++ ++....+.. +.. .-++.+.. ++++|+.... ...+++||+. .
T Consensus 57 ~~l~~~d~~--------~~~i~~~~~-~g~~~~~~~---~~~-~~~gl~~d~dG~l~v~~~~------~~~v~~~~~~-g 116 (305)
T 3dr2_A 57 RTLVWSDLV--------GRRVLGWRE-DGTVDVLLD---ATA-FTNGNAVDAQQRLVHCEHG------RRAITRSDAD-G 116 (305)
T ss_dssp TEEEEEETT--------TTEEEEEET-TSCEEEEEE---SCS-CEEEEEECTTSCEEEEETT------TTEEEEECTT-S
T ss_pred CEEEEEECC--------CCEEEEEeC-CCCEEEEeC---CCC-ccceeeECCCCCEEEEECC------CCEEEEECCC-C
Confidence 457776543 245888888 455554431 111 12233332 5677776321 1368899986 6
Q ss_pred cEEEeeccCCCCCcccceEEEEE-CCEEEEE----cccCC--------CcccceEEEEECCCCcEEEeecCCCCCCCcce
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI-GSKIYVF----GGLNN--------DTIFSSLHVLDTDTLQWKELLINGEGPCARHS 447 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~----GG~~~--------~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~ 447 (1057)
+.+.+...........-...++. ++++|+. |-... ......+++||+.+.+++.+. . ... .
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~---p 190 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDH---P 190 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESS---E
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CCC---C
Confidence 66665421100000111122232 6778885 32210 112357999999888887765 2 111 1
Q ss_pred eEEEEE-CC-EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEE
Q 036185 448 HSMLAY-GS-RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSL 524 (1057)
Q Consensus 448 ~s~~~~-~~-~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~ 524 (1057)
...+.. ++ .||+..........+.+++||+..............+... -.+++.- ++.||+..+ +.+++
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~~d~~G~lwv~~~-------~gv~~ 262 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL-PDGFCVDRGGWLWSSSG-------TGVCV 262 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC-CCSEEECTTSCEEECCS-------SEEEE
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC-CCeEEECCCCCEEEecC-------CcEEE
Confidence 223332 33 5777654321112357999998765532211111111111 1122222 566776542 35999
Q ss_pred EECCCCeEEEeec
Q 036185 525 LDLQLHIWKHLKL 537 (1057)
Q Consensus 525 yd~~~~~W~~v~~ 537 (1057)
||++......+..
T Consensus 263 ~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 263 FDSDGQLLGHIPT 275 (305)
T ss_dssp ECTTSCEEEEEEC
T ss_pred ECCCCCEEEEEEC
Confidence 9998777766653
No 467
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.30 E-value=5.8 Score=42.50 Aligned_cols=146 Identities=12% Similarity=0.083 Sum_probs=73.3
Q ss_pred EEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEE
Q 036185 355 HMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWK 433 (1057)
Q Consensus 355 ~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (1057)
.+++.||.+. .+.+||..+......-. + ....-.+.++. ++++++.|+.++ .+.+||+.+..-.
T Consensus 186 ~~~~s~~~d~------~i~i~d~~~~~~~~~~~-~---h~~~v~~~~~s~~~~~l~s~s~Dg-----~i~iwd~~~~~~~ 250 (340)
T 4aow_A 186 PIIVSCGWDK------LVKVWNLANCKLKTNHI-G---HTGYLNTVTVSPDGSLCASGGKDG-----QAMLWDLNEGKHL 250 (340)
T ss_dssp CEEEEEETTS------CEEEEETTTTEEEEEEC-C---CSSCEEEEEECTTSSEEEEEETTC-----EEEEEETTTTEEE
T ss_pred cEEEEEcCCC------EEEEEECCCCceeeEec-C---CCCcEEEEEECCCCCEEEEEeCCC-----eEEEEEeccCcee
Confidence 4566666543 58889998876543321 1 11111222222 566777887765 4788888776543
Q ss_pred EeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCC----CceeeEEEEE--CCEE
Q 036185 434 ELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPH----ARFSHTMFLY--KNYL 507 (1057)
Q Consensus 434 ~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~----~R~~hs~~~~--~~~l 507 (1057)
..-.. ...-.++....+..++.++.++ .+..||+.+..-........... ....-.++.+ ++..
T Consensus 251 ~~~~~-----~~~v~~~~~~~~~~~~~~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 251 YTLDG-----GDIINALCFSPNRYWLCAATGP-----SIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp EEEEC-----SSCEEEEEECSSSSEEEEEETT-----EEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred eeecC-----CceEEeeecCCCCceeeccCCC-----EEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence 32221 1112233334455556666543 47888888765432211111000 0111122233 5667
Q ss_pred EEEeccCCCCCCCeEEEEECCCC
Q 036185 508 GLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 508 ~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
++.||.++ .+.+||+++.
T Consensus 321 l~sgs~Dg-----~v~iW~~~tG 338 (340)
T 4aow_A 321 LFAGYTDN-----LVRVWQVTIG 338 (340)
T ss_dssp EEEEETTS-----CEEEEEEEC-
T ss_pred EEEEeCCC-----EEEEEeCCCc
Confidence 77777433 5777877664
No 468
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=88.26 E-value=21 Score=43.41 Aligned_cols=199 Identities=12% Similarity=0.028 Sum_probs=105.4
Q ss_pred ccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCC----------CCCCCcEEEEECCCCcEE--Eee
Q 036185 320 NDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADP----------LNILSDVWVFNMAKSKWT--LLE 386 (1057)
Q Consensus 320 ~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~----------~~~~~~v~~yd~~t~~W~--~~~ 386 (1057)
..++++|+.+++........ .. ..+.+.. +++.++++..... ......+|++++.+.... .+-
T Consensus 151 ~~i~v~d~~tg~~~~~~~~~---~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~ 226 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVLER---VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA 226 (710)
T ss_dssp EEEEEEETTTTEEEEEEEEE---EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE
T ss_pred EEEEEEECCCCCCCcccccC---cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe
Confidence 47999999999877643111 11 1223333 4444444443321 022456999999887632 221
Q ss_pred ccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCC------C--cEEEeecCCCCCCCcceeEEEEECCEE
Q 036185 387 CSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDT------L--QWKELLINGEGPCARHSHSMLAYGSRL 457 (1057)
Q Consensus 387 ~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t------~--~W~~~~~~g~~P~~r~~~s~~~~~~~l 457 (1057)
. ....+....+...- +++.++++...+....++++.+|+.+ . .|..+.... ..........++.+
T Consensus 227 -~-~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~----~~~~~~~s~dg~~l 300 (710)
T 2xdw_A 227 -E-FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF----EGEYDYVTNEGTVF 300 (710)
T ss_dssp -C-CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS----SSCEEEEEEETTEE
T ss_pred -c-cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCC----CcEEEEEeccCCEE
Confidence 1 11122222233332 45544444332222257899999976 4 688876521 11122233456778
Q ss_pred EEEecCCCCcccCcEEEEECCCC---eEEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEEECCCCe-E
Q 036185 458 YMFGGYNGEKALGDLYTFDVHAC---LWKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQLHI-W 532 (1057)
Q Consensus 458 yv~GG~~~~~~~~~l~~yd~~t~---~W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~~~~-W 532 (1057)
|+.+..++ ....|+.+|+.+. .|+.+... .+. ..-.++... ++.+++....++ ...++++|+.+.+ .
T Consensus 301 ~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~--~~~-~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~ 372 (710)
T 2xdw_A 301 TFKTNRHS--PNYRLINIDFTDPEESKWKVLVPE--HEK-DVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALL 372 (710)
T ss_dssp EEEECTTC--TTCEEEEEETTSCCGGGCEEEECC--CSS-CEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEE
T ss_pred EEEECCCC--CCCEEEEEeCCCCCcccceeccCC--CCC-CeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEE
Confidence 88865432 2457999999876 48876322 111 122234445 677777665322 3478999985554 4
Q ss_pred EEee
Q 036185 533 KHLK 536 (1057)
Q Consensus 533 ~~v~ 536 (1057)
..+.
T Consensus 373 ~~l~ 376 (710)
T 2xdw_A 373 KIFP 376 (710)
T ss_dssp EEEC
T ss_pred EecC
Confidence 5554
No 469
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=88.23 E-value=13 Score=39.37 Aligned_cols=180 Identities=7% Similarity=-0.072 Sum_probs=91.6
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
++.+|+.+... ..+++||+.+. ...+... . ..-.+.+.. ++++|+..... ..+++||+.+.+
T Consensus 39 g~~l~~~~~~~------~~i~~~~~~~~-~~~~~~~----~-~~~~~l~~~~dg~l~v~~~~~-----~~i~~~d~~~g~ 101 (296)
T 3e5z_A 39 RSAVIFSDVRQ------NRTWAWSDDGQ-LSPEMHP----S-HHQNGHCLNKQGHLIACSHGL-----RRLERQREPGGE 101 (296)
T ss_dssp GTEEEEEEGGG------TEEEEEETTSC-EEEEESS----C-SSEEEEEECTTCCEEEEETTT-----TEEEEECSTTCC
T ss_pred CCEEEEEeCCC------CEEEEEECCCC-eEEEECC----C-CCcceeeECCCCcEEEEecCC-----CeEEEEcCCCCc
Confidence 34588887654 36999999988 6665421 1 111223332 56787764321 358999998888
Q ss_pred EEEeecCC-CCCCCcceeEEEEECCEEEEE----ecCCC--------CcccCcEEEEECCCCeEEEeeccCCCCCCceee
Q 036185 432 WKELLING-EGPCARHSHSMLAYGSRLYMF----GGYNG--------EKALGDLYTFDVHACLWKKEDIAARSPHARFSH 498 (1057)
Q Consensus 432 W~~~~~~g-~~P~~r~~~s~~~~~~~lyv~----GG~~~--------~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~h 498 (1057)
...+.... ..+..+....++.-++++|+. |.... ......++.||+. .....+.. ....+ .
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~~~---~ 175 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIR--DRVKP---N 175 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEEC--CCSSE---E
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeec--CCCCC---c
Confidence 87764311 111111122233336778886 43210 1113479999987 55554422 11111 2
Q ss_pred EEEEE-CCEEEEEeccCCCCCCCeEEEEECC-CCeE-EEeeccCCCCCcccceEEEEeCCEEEEEe
Q 036185 499 TMFLY-KNYLGLFGGCPVRQNYQELSLLDLQ-LHIW-KHLKLNYVCKELFVRSTANVVDDDLIMIG 561 (1057)
Q Consensus 499 s~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~-~~~W-~~v~~~~~~~~~~~~~~a~~~~~~iyi~G 561 (1057)
+.+.. ++.+++.+. ..+.+++||+. +.+. ...... ..........+.--++++|+..
T Consensus 176 gi~~s~dg~~lv~~~-----~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDT-----GDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEEECTTSCEEEEET-----TTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE
T ss_pred cEEECCCCCEEEEeC-----CCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc
Confidence 33332 455554443 23589999986 4555 221111 1111111222333467788876
No 470
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=88.13 E-value=15 Score=39.76 Aligned_cols=192 Identities=11% Similarity=0.061 Sum_probs=90.5
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCC--CcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQ--GTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t--~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
..++.|+.++ .+.++|+.. ..+..+.. +......-..+.. ++.+++.|+.++ .+.+||..
T Consensus 120 ~~las~s~D~--------~v~iwd~~~~~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~ 183 (330)
T 2hes_X 120 YYLATCSRDK--------SVWIWETDESGEEYECISV--LQEHSQDVKHVIWHPSEALLASSSYDD------TVRIWKDY 183 (330)
T ss_dssp CEEEEEETTS--------CEEEEECCTTCCCCEEEEE--ECCCSSCEEEEEECSSSSEEEEEETTS------CEEEEEEE
T ss_pred CEEEEEeCCC--------EEEEEeccCCCCCeEEEEE--eccCCCceEEEEECCCCCEEEEEcCCC------eEEEEECC
Confidence 4677777554 466777632 23333221 1111111122222 456777777654 57888888
Q ss_pred CCcEEEeeccCCCCCcccceEEEEEC---CEEEEEcccCCCcccceEEEEECCC------CcEEEeecCCCCCCCcceeE
Q 036185 379 KSKWTLLECSGSVFQPRHRHAAAVIG---SKIYVFGGLNNDTIFSSLHVLDTDT------LQWKELLINGEGPCARHSHS 449 (1057)
Q Consensus 379 t~~W~~~~~~g~~p~~R~~hsa~~~~---~~iyv~GG~~~~~~~~~v~~yD~~t------~~W~~~~~~g~~P~~r~~~s 449 (1057)
+..|..+....... ..-.+..+.. +..++.|+.++. +.+||+.+ ..|........ .....-.+
T Consensus 184 ~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~s~D~~-----v~iw~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~ 255 (330)
T 2hes_X 184 DDDWECVAVLNGHE--GTVWSSDFDKTEGVFRLCSGSDDST-----VRVWKYMGDDEDDQQEWVCEAILPD-VHKRQVYN 255 (330)
T ss_dssp TTEEEEEEEECCCS--SCEEEEEECCSSSSCEEEEEETTSC-----EEEEEEEEECTTSCEEEEEEEECCS-CCSSCEEE
T ss_pred CCCeeEEEEccCCC--CcEEEEEecCCCCeeEEEEEeCCCe-----EEEEEecCCCccccceeEEeeeccc-ccccceEE
Confidence 87776664221111 1111222222 345666766553 55555432 24554443211 01122223
Q ss_pred EEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE----CCEEEEEeccCCCCCCCeEEEE
Q 036185 450 MLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY----KNYLGLFGGCPVRQNYQELSLL 525 (1057)
Q Consensus 450 ~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~----~~~l~i~GG~~~~~~~~~i~~y 525 (1057)
++...+.+++.||.++ .+..||..+..|..+..... ......-.++.+ ++.+++.||.++ .+.++
T Consensus 256 v~~s~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~-~h~~~~v~~v~~~~~~~~~~las~s~Dg-----~v~~W 324 (330)
T 2hes_X 256 VAWGFNGLIASVGADG-----VLAVYEEVDGEWKVFAKRAL-CHGVYEINVVKWLELNGKTILATGGDDG-----IVNFW 324 (330)
T ss_dssp EEECTTSCEEEEETTS-----CEEEEEEETTEEEEEEEESC-TTTTSCEEEEEEC-----CCEEEEETTS-----EEEEE
T ss_pred EEEcCCCEEEEEeCCC-----EEEEEEcCCCceEEEecccc-ccccceEEEEEEecCCCceEEEEecCCC-----cEEEE
Confidence 3333455677777654 47888888888865432111 111101122222 456777787432 56667
Q ss_pred ECCC
Q 036185 526 DLQL 529 (1057)
Q Consensus 526 d~~~ 529 (1057)
|+++
T Consensus 325 ~~~~ 328 (330)
T 2hes_X 325 SLEK 328 (330)
T ss_dssp EC--
T ss_pred Eecc
Confidence 6543
No 471
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=88.11 E-value=1.5 Score=49.92 Aligned_cols=189 Identities=11% Similarity=0.031 Sum_probs=93.4
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCc-cccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPR-LGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R-~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
.+++.|+.++ .+.++|+.+.....+. ...... .-.+++.. ++..++.|+.++ .+.+||+.+
T Consensus 133 ~~lasGs~dg--------~i~lWd~~~~~~~~~~--~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~~ 196 (435)
T 4e54_B 133 STVAVGSKGG--------DIMLWNFGIKDKPTFI--KGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFKG 196 (435)
T ss_dssp TCEEEEETTS--------CEEEECSSCCSCCEEE--CCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETTS
T ss_pred CEEEEEeCCC--------EEEEEECCCCCceeEE--EccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeeccC
Confidence 4788888655 4778888766543322 111111 11223332 455667777654 588899988
Q ss_pred CcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE--CCE
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY--GSR 456 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~--~~~ 456 (1057)
+....+.... .......+..+. ++.+++.|+.++ .+..||+....-..+... ...-.++... ++.
T Consensus 197 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~~~~~~~~h-----~~~v~~v~~~p~~~~ 264 (435)
T 4e54_B 197 NILRVFASSD--TINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGKELWNLRMH-----KKKVTHVALNPCCDW 264 (435)
T ss_dssp CEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSCBCCCSBCC-----SSCEEEEEECTTCSS
T ss_pred CceeEEeccC--CCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcceeEEEecc-----cceEEeeeecCCCce
Confidence 7766554221 111112223333 566778887665 378888765432211110 0111122222 234
Q ss_pred EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCCCe
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~~~ 531 (1057)
+++.|+.++ .+.+||+.+..-... ..........-.++.+ ++..++.|+.+ ..+.+||+.+..
T Consensus 265 ~~~s~s~d~-----~v~iwd~~~~~~~~~--~~~~~~h~~~v~~~~~spdg~~l~s~~~D-----~~i~iwd~~~~~ 329 (435)
T 4e54_B 265 FLATASVDQ-----TVKIWDLRQVRGKAS--FLYSLPHRHPVNAACFSPDGARLLTTDQK-----SEIRVYSASQWD 329 (435)
T ss_dssp EEEEEETTS-----BCCEEETTTCCSSSC--CSBCCBCSSCEEECCBCTTSSEEEEEESS-----SCEEEEESSSSS
T ss_pred EEEEecCcc-----eeeEEecccccccce--EEEeeeccccccceeECCCCCeeEEEcCC-----CEEEEEECCCCc
Confidence 777777654 356777765432110 0000001111112222 45666777743 358888887643
No 472
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=87.97 E-value=33 Score=37.07 Aligned_cols=191 Identities=10% Similarity=0.025 Sum_probs=98.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEE-EECCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSS-LIGDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v-~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+|+.+..+ ..+++||+.+++...+.. +. .-++++ .-++++|+... +.+++||+.+.
T Consensus 61 ~~l~~~d~~~--------~~i~~~d~~~~~~~~~~~---~~--~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g 119 (326)
T 2ghs_A 61 GTAWWFNILE--------RELHELHLASGRKTVHAL---PF--MGSALAKISDSKQLIASD--------DGLFLRDTATG 119 (326)
T ss_dssp TEEEEEEGGG--------TEEEEEETTTTEEEEEEC---SS--CEEEEEEEETTEEEEEET--------TEEEEEETTTC
T ss_pred CEEEEEECCC--------CEEEEEECCCCcEEEEEC---CC--cceEEEEeCCCeEEEEEC--------CCEEEEECCCC
Confidence 5688876532 468999999887665542 21 122222 23678777531 24999999999
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CCEEEEEcc-cCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEE-CC-
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GSKIYVFGG-LNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAY-GS- 455 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~~iyv~GG-~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~-~~- 455 (1057)
++..+..... ..+........+ ++++|+... .........+++|| +.+...+.... ......+.. ++
T Consensus 120 ~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-----~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 120 VLTLHAELES-DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-----SIPNSICFSPDGT 191 (326)
T ss_dssp CEEEEECSST-TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-----SSEEEEEECTTSC
T ss_pred cEEEEeeCCC-CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-----cccCCeEEcCCCC
Confidence 9877752211 011111222222 567776331 11122345789999 56666553211 111223322 34
Q ss_pred EEEEEecCCCCcccCcEEEEECC--CC-e------EEEeeccCCCCCCceeeEEEEE-CCEEEEEeccCCCCCCCeEEEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVH--AC-L------WKKEDIAARSPHARFSHTMFLY-KNYLGLFGGCPVRQNYQELSLL 525 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~--t~-~------W~~v~~~~~~P~~R~~hs~~~~-~~~l~i~GG~~~~~~~~~i~~y 525 (1057)
.+|+.... .+.|++||.. +. . +... .. ....-.+++.- ++.+|+... ....+++|
T Consensus 192 ~lyv~~~~-----~~~I~~~d~~~~~Gl~~~~~~~~~~~--~~---~~~~p~gi~~d~~G~lwva~~-----~~~~v~~~ 256 (326)
T 2ghs_A 192 TGYFVDTK-----VNRLMRVPLDARTGLPTGKAEVFIDS--TG---IKGGMDGSVCDAEGHIWNARW-----GEGAVDRY 256 (326)
T ss_dssp EEEEEETT-----TCEEEEEEBCTTTCCBSSCCEEEEEC--TT---SSSEEEEEEECTTSCEEEEEE-----TTTEEEEE
T ss_pred EEEEEECC-----CCEEEEEEcccccCCcccCceEEEEC--CC---CCCCCCeeEECCCCCEEEEEe-----CCCEEEEE
Confidence 57776432 2469999975 44 2 2221 00 01111223322 466776542 12379999
Q ss_pred ECCCCeEEEee
Q 036185 526 DLQLHIWKHLK 536 (1057)
Q Consensus 526 d~~~~~W~~v~ 536 (1057)
|+....-..+.
T Consensus 257 d~~g~~~~~i~ 267 (326)
T 2ghs_A 257 DTDGNHIARYE 267 (326)
T ss_dssp CTTCCEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 99655545544
No 473
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=87.95 E-value=2.2 Score=46.44 Aligned_cols=131 Identities=16% Similarity=0.083 Sum_probs=76.7
Q ss_pred CEEEEecCcccHhHHHHHH---hCC-Cc--EEEEEecCH--------HHHHHHHHHHHHc--CC-Cc--cEEEEeCCccc
Q 036185 897 EVIVDLFAGIGYFVLPFLV---RAK-AR--LVYACEWNP--------CAVEALKHNLQAN--SV-SD--HCIVLEGDNRF 957 (1057)
Q Consensus 897 ~~VlDlf~G~G~fsl~~a~---~~~-a~--~V~avD~n~--------~ai~~~~~N~~~N--~~-~~--~v~~~~~D~~~ 957 (1057)
-+|+|++=|+|.-.+.++. +.+ .. +.+++|..| +.++.+.+.+..+ .. .+ ...++.||+++
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 3799999999997654432 112 22 467777532 1122222222111 01 11 35688999998
Q ss_pred cCC---CCCccEEEECCCCCC-------hhHHHHHHHHhhCCCcEEEEEcccccchhHHHHHHHHHHHHHHHHhcCCcee
Q 036185 958 TAP---KGVANRVCLGLIPTS-------ENSWVTAVQALRSEGGTLHVHGNVKDSEEKLWAEHVSKSIYEIARSEGHRWE 1027 (1057)
Q Consensus 958 ~~~---~~~~D~Vil~~~P~~-------~~~~~~a~~~l~~~gg~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 1027 (1057)
.++ ...+|.|++|.+... ...+....++++ +||++..|+... .+++.+.+.|+.
T Consensus 178 ~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~-pgg~laTYtaag-------------~VRR~L~~aGF~-- 241 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERID-EKGYWVSYSSSL-------------SVRKSLLTLGFK-- 241 (308)
T ss_dssp HGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEE-EEEEEEESCCCH-------------HHHHHHHHTTCE--
T ss_pred HHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhC-CCcEEEEEeCcH-------------HHHHHHHHCCCE--
Confidence 875 346899999974322 233555555566 799999988864 345667778986
Q ss_pred eeeeEEEEeEeecCCceEEEE
Q 036185 1028 VTIEHIERVKWYAPHIRHLVA 1048 (1057)
Q Consensus 1028 ~~~~~~~~Vk~~aP~~~h~~~ 1048 (1057)
|++++-++..-.+.+.
T Consensus 242 -----V~k~~G~g~KReml~A 257 (308)
T 3vyw_A 242 -----VGSSREIGRKRKGTVA 257 (308)
T ss_dssp -----EEEEECC---CEEEEE
T ss_pred -----EEecCCCCCCCceeEE
Confidence 4666666544455554
No 474
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.76 E-value=29 Score=36.20 Aligned_cols=185 Identities=6% Similarity=0.032 Sum_probs=86.0
Q ss_pred EEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCCc-
Q 036185 304 ILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKSK- 381 (1057)
Q Consensus 304 lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~- 381 (1057)
.++.|+.++ .+.+||+.+........ .. ...-.+++.. ++..++.|+.++ .+..|+.....
T Consensus 31 ~l~s~~~dg--------~v~vw~~~~~~~~~~~~--~~-~~~v~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~~~ 93 (313)
T 3odt_A 31 KVASVSRDG--------TVRLWSKDDQWLGTVVY--TG-QGFLNSVCYDSEKELLLFGGKDT------MINGVPLFATSG 93 (313)
T ss_dssp EEEEEETTS--------EEEEEEESSSEEEEEEE--EC-SSCEEEEEEETTTTEEEEEETTS------CEEEEETTCCTT
T ss_pred EEEEEEcCC--------cEEEEECCCCEEEEEee--cC-CccEEEEEECCCCCEEEEecCCC------eEEEEEeeecCC
Confidence 677777543 57788877665433221 11 1111222222 556777777654 46777765432
Q ss_pred EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCEEEEEe
Q 036185 382 WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSRLYMFG 461 (1057)
Q Consensus 382 W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~lyv~G 461 (1057)
...+. ........-.+...++..++.|+.++ .+..||.....+..... ..+.........++..++.|
T Consensus 94 ~~~~~---~~~~~~~~i~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 94 EDPLY---TLIGHQGNVCSLSFQDGVVISGSWDK-----TAKVWKEGSLVYNLQAH----NASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp SCC-C---EECCCSSCEEEEEEETTEEEEEETTS-----EEEEEETTEEEEEEECC----SSCEEEEEEEETTTTEEEEE
T ss_pred CCccc---chhhcccCEEEEEecCCEEEEEeCCC-----CEEEEcCCcEEEecccC----CCceeEEEEccCCCCEEEEE
Confidence 11111 01111112223333556677776654 37778832222222111 11111222222256677777
Q ss_pred cCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeE
Q 036185 462 GYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIW 532 (1057)
Q Consensus 462 G~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W 532 (1057)
+.++ .+..||...... .. ...........+..-++. ++.|+. ...+.+||+.+.+-
T Consensus 162 ~~d~-----~i~i~d~~~~~~-~~---~~~~~~~i~~~~~~~~~~-~~~~~~-----dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 162 SADK-----TIKLWQNDKVIK-TF---SGIHNDVVRHLAVVDDGH-FISCSN-----DGLIKLVDMHTGDV 217 (313)
T ss_dssp ETTS-----CEEEEETTEEEE-EE---CSSCSSCEEEEEEEETTE-EEEEET-----TSEEEEEETTTCCE
T ss_pred ECCC-----CEEEEecCceEE-EE---eccCcccEEEEEEcCCCe-EEEccC-----CCeEEEEECCchhh
Confidence 7654 477888332222 11 111112222222333666 666663 23799999987653
No 475
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.75 E-value=17 Score=47.28 Aligned_cols=219 Identities=11% Similarity=0.034 Sum_probs=108.7
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+++.||.++ .+.+||..+++....- ......-.++.+ ++..++.||.++ .+.+||..+
T Consensus 627 ~~~l~s~~~d~--------~i~vw~~~~~~~~~~~----~~h~~~v~~~~~s~~~~~l~s~~~d~------~v~vwd~~~ 688 (1249)
T 3sfz_A 627 GQRIASCGADK--------TLQVFKAETGEKLLDI----KAHEDEVLCCAFSSDDSYIATCSADK------KVKIWDSAT 688 (1249)
T ss_dssp SSEEEEEETTS--------CEEEEETTTCCEEEEE----CCCSSCEEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred CCEEEEEeCCC--------eEEEEECCCCCEEEEe----ccCCCCEEEEEEecCCCEEEEEeCCC------eEEEEECCC
Confidence 45777777543 5788998887643321 111112222222 456667777543 699999988
Q ss_pred CcEEEeeccCCCCCcccceEEEEE----CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECC
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAVI----GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGS 455 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~~----~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~ 455 (1057)
.+....-. .....-.++.+ ++.+++.|+.++ .+..||+.+......-.. ...........-++
T Consensus 689 ~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~~~~~---h~~~v~~~~~sp~~ 755 (1249)
T 3sfz_A 689 GKLVHTYD-----EHSEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRNTMFG---HTNSVNHCRFSPDD 755 (1249)
T ss_dssp CCEEEEEE-----CCSSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEEEECC---CSSCEEEEEECSST
T ss_pred CceEEEEc-----CCCCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhheecC---CCCCEEEEEEecCC
Confidence 76543321 11111222223 233566666554 388999988765433221 11111111122245
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCC------CCC--ceeeEEEEE--CCEEEEEeccCCCCCCCeEEEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARS------PHA--RFSHTMFLY--KNYLGLFGGCPVRQNYQELSLL 525 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~------P~~--R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~y 525 (1057)
..++.|+.++ .+..||+.+..-......... +.. .....++.+ ++..+++++ .+.+.+|
T Consensus 756 ~~l~s~s~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~------~~~v~~~ 824 (1249)
T 3sfz_A 756 ELLASCSADG-----TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA------KNKVLLF 824 (1249)
T ss_dssp TEEEEEESSS-----EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE------TTEEEEE
T ss_pred CEEEEEECCC-----eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc------CCcEEEE
Confidence 6777777654 488888877654332111110 000 001111111 455555554 2478999
Q ss_pred ECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCC
Q 036185 526 DLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGA 564 (1057)
Q Consensus 526 d~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~ 564 (1057)
|+.+........... .......+...++.++++|+..
T Consensus 825 d~~~~~~~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~d 861 (1249)
T 3sfz_A 825 DIHTSGLLAEIHTGH--HSTIQYCDFSPYDHLAVIALSQ 861 (1249)
T ss_dssp ETTTCCEEEEEECSS--SSCCCEEEECSSTTEEEEECSS
T ss_pred EecCCCceeEEcCCC--CCceEEEEEcCCCCEEEEEeCC
Confidence 998877655432111 1122233333456677777654
No 476
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=87.72 E-value=0.68 Score=51.44 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=68.1
Q ss_pred ccCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCcccc---CC--CCCcc
Q 036185 892 LDCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFT---AP--KGVAN 965 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~---~~--~~~~D 965 (1057)
.+.+|++||-.+|| +|.+++.+|+..|+ +|+++|.+++..+.+++ .|.+ .++..+..++ +. ...+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE---VAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC---EEEeCCCcCHHHHHHHhCCCCC
Confidence 35789999998876 58889888877788 79999999999988765 4543 1222221111 11 12578
Q ss_pred EEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 966 RVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 966 ~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
.|+-.. . ....+..+++.|+ ++|.+.+.....
T Consensus 235 ~vid~~-g-~~~~~~~~~~~l~-~~G~iv~~G~~~ 266 (340)
T 3s2e_A 235 GVLVTA-V-SPKAFSQAIGMVR-RGGTIALNGLPP 266 (340)
T ss_dssp EEEESS-C-CHHHHHHHHHHEE-EEEEEEECSCCS
T ss_pred EEEEeC-C-CHHHHHHHHHHhc-cCCEEEEeCCCC
Confidence 887654 2 4567888999998 688888876543
No 477
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=87.46 E-value=38 Score=37.26 Aligned_cols=181 Identities=15% Similarity=0.117 Sum_probs=88.2
Q ss_pred cEEEEeCCCCcEEEeccCCCCCCccc-cEEEEE---CCEEEEEcccCCCCCCCCcEEEEECCCCc--EEEeeccCCCCCc
Q 036185 321 DLFLLDPLQGTIKAIHTEGSPSPRLG-HTSSLI---GDHMFIIGGRADPLNILSDVWVFNMAKSK--WTLLECSGSVFQP 394 (1057)
Q Consensus 321 d~~~yd~~t~~W~~l~~~~~P~~R~~-hs~v~~---~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~p~~ 394 (1057)
.+.++|+.+++....-....+..... -..+.. ++.+++.|+.++ .+.+||+.... -..+. +. .
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~------~v~~wd~~~~~~~~~~~~--~h---~ 249 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT------TVRLWDLRITSRAVRTYH--GH---E 249 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS------CEEEEETTTTCCCCEEEC--CC---S
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC------eEEEEECCCCCcceEEEC--Cc---C
Confidence 47788888776543321122211111 112222 567888888765 58889986321 11111 10 0
Q ss_pred ccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCC----CCCcceeEEEEECCEEEEEecCCCCccc
Q 036185 395 RHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEG----PCARHSHSMLAYGSRLYMFGGYNGEKAL 469 (1057)
Q Consensus 395 R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~----P~~r~~~s~~~~~~~lyv~GG~~~~~~~ 469 (1057)
..-.+.+.. ++..++.|+.++. +.+||+.+..-...-..... ..+.....+...++.+++.|+.++
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~-----i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg---- 320 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGT-----CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG---- 320 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSC-----EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS----
T ss_pred CCeEEEEEecCCCeEEEEcCCCe-----EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC----
Confidence 011122222 5567778877654 88899988754433221100 001111122223566777776554
Q ss_pred CcEEEEECCCCeEEEeeccCCCCCC-ceeeEEEEE--CCEEEEEeccCCCCCCCeEEEEECCC
Q 036185 470 GDLYTFDVHACLWKKEDIAARSPHA-RFSHTMFLY--KNYLGLFGGCPVRQNYQELSLLDLQL 529 (1057)
Q Consensus 470 ~~l~~yd~~t~~W~~v~~~~~~P~~-R~~hs~~~~--~~~l~i~GG~~~~~~~~~i~~yd~~~ 529 (1057)
.+..||..+....... ...... ...-.++.+ ++..++.||.++ .+.++++..
T Consensus 321 -~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~-----~i~iW~~~~ 375 (380)
T 3iz6_a 321 -DCYVWDTLLAEMVLNL--GTLQNSHEGRISCLGLSSDGSALCTGSWDK-----NLKIWAFSG 375 (380)
T ss_dssp -CEEEEETTTCCEEEEE--CCSCSSCCCCCCEEEECSSSSEEEEECTTS-----CEEEEECCS
T ss_pred -CEEEEECCCCceEEEE--ecccCCCCCceEEEEECCCCCEEEEeeCCC-----CEEEEecCC
Confidence 4889998776544321 111111 111122222 567778888543 466666544
No 478
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.43 E-value=0.87 Score=51.82 Aligned_cols=99 Identities=12% Similarity=0.024 Sum_probs=66.1
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCC-ccccC----CCCCccE
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGD-NRFTA----PKGVANR 966 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D-~~~~~----~~~~~D~ 966 (1057)
+.+|++||-.+|| +|.+++.+|+..|+++|+++|.+++.++.+++ .|.+ .+..-..| ..+.+ ....+|+
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dv 257 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGFE-IADLSLDTPLHEQIAALLGEPEVDC 257 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCE-EEETTSSSCHHHHHHHHHSSSCEEE
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcchHHHHHHHHhCCCCCCE
Confidence 5689999998875 48888888877888789999999999998864 4542 11111111 11111 1235888
Q ss_pred EEECCCCCC--------------hhHHHHHHHHhhCCCcEEEEEcc
Q 036185 967 VCLGLIPTS--------------ENSWVTAVQALRSEGGTLHVHGN 998 (1057)
Q Consensus 967 Vil~~~P~~--------------~~~~~~a~~~l~~~gg~l~~~~~ 998 (1057)
|+-.. ... ...+..++++|+ +||.+.+...
T Consensus 258 vid~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G~iv~~G~ 301 (398)
T 1kol_A 258 AVDAV-GFEARGHGHEGAKHEAPATVLNSLMQVTR-VAGKIGIPGL 301 (398)
T ss_dssp EEECC-CTTCBCSSTTGGGSBCTTHHHHHHHHHEE-EEEEEEECSC
T ss_pred EEECC-CCcccccccccccccchHHHHHHHHHHHh-cCCEEEEecc
Confidence 76543 332 136889999998 6888877764
No 479
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=87.17 E-value=13 Score=39.82 Aligned_cols=185 Identities=7% Similarity=-0.008 Sum_probs=91.5
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCcccc-EEEEE-CCEEEEEcccCCCCCCCCcEEEEECCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGH-TSSLI-GDHMFIIGGRADPLNILSDVWVFNMAK 379 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~h-s~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t 379 (1057)
+.+++.|+.++ .+.+||..+....... ........- +++.. ++..++.|+.++ .+.+||..+
T Consensus 54 g~~l~~~~~dg--------~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~dg------~v~iwd~~~ 117 (368)
T 3mmy_A 54 GNFLIAGSWAN--------DVRCWEVQDSGQTIPK--AQQMHTGPVLDVCWSDDGSKVFTASCDK------TAKMWDLSS 117 (368)
T ss_dssp SEEEEEEETTS--------EEEEEEECTTSCEEEE--EEEECSSCEEEEEECTTSSEEEEEETTS------EEEEEETTT
T ss_pred ceEEEEECCCC--------cEEEEEcCCCCceeEE--EeccccCCEEEEEECcCCCEEEEEcCCC------cEEEEEcCC
Confidence 36888887554 4777777663222111 001011111 22222 455666776543 689999998
Q ss_pred CcEEEeeccCCCCCcccceEEEE---ECCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEEECCE
Q 036185 380 SKWTLLECSGSVFQPRHRHAAAV---IGSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLAYGSR 456 (1057)
Q Consensus 380 ~~W~~~~~~g~~p~~R~~hsa~~---~~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~~~~~ 456 (1057)
........ ....-.+.+. -++.+++.|+.++ .+..||+.+.+-...-. ......+.....+.
T Consensus 118 ~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~ 182 (368)
T 3mmy_A 118 NQAIQIAQ-----HDAPVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSNPMMVLQ-----LPERCYCADVIYPM 182 (368)
T ss_dssp TEEEEEEE-----CSSCEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSSCSEEEE-----CSSCEEEEEEETTE
T ss_pred CCceeecc-----ccCceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCcEEEEEe-----cCCCceEEEecCCe
Confidence 87655431 1111222222 2567778887664 48889987765322211 11223344455565
Q ss_pred EEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEE-EEC----CEEEEEeccCCCCCCCeEEEEECCCC
Q 036185 457 LYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMF-LYK----NYLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 457 lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~-~~~----~~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
+++.++ + ..+..||+.+..-...... .+......+.. ... ...++.|+. ...+.+||+...
T Consensus 183 ~~~~~~-~-----~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----dg~i~i~~~~~~ 248 (368)
T 3mmy_A 183 AVVATA-E-----RGLIVYQLENQPSEFRRIE--SPLKHQHRCVAIFKDKQNKPTGFALGSI-----EGRVAIHYINPP 248 (368)
T ss_dssp EEEEEG-G-----GCEEEEECSSSCEEEEECC--CSCSSCEEEEEEEECTTSCEEEEEEEET-----TSEEEEEESSCS
T ss_pred eEEEeC-C-----CcEEEEEeccccchhhhcc--ccccCCCceEEEcccCCCCCCeEEEecC-----CCcEEEEecCCC
Confidence 554433 2 3478888876542221111 11111112222 222 233666663 236788888765
No 480
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=87.16 E-value=8.8 Score=42.47 Aligned_cols=196 Identities=12% Similarity=0.040 Sum_probs=95.3
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCC----C-cEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEE
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQ----G-TIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWV 374 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t----~-~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~ 374 (1057)
+.+++.|+.++ .+.+||..+ . ....+. ... ..-.++... ++.+++.|+.++ .+.+
T Consensus 79 ~~~l~~~~~dg--------~v~vw~~~~~~~~~~~~~~~~--~h~--~~v~~~~~~~~~~~~l~s~~~dg------~v~i 140 (416)
T 2pm9_A 79 NKIIAGALDNG--------SLELYSTNEANNAINSMARFS--NHS--SSVKTVKFNAKQDNVLASGGNNG------EIFI 140 (416)
T ss_dssp SSCEEEEESSS--------CEEEECCSSTTSCCCEEEECC--CSS--SCCCEEEECSSSTTBEEEECSSS------CEEB
T ss_pred CCeEEEEccCC--------eEEEeecccccccccchhhcc--CCc--cceEEEEEcCCCCCEEEEEcCCC------eEEE
Confidence 35667776543 577888776 1 222221 111 111223333 256777777654 5888
Q ss_pred EECCCCc------EEEeeccCCCC-CcccceEEEEE-C-CEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCC--
Q 036185 375 FNMAKSK------WTLLECSGSVF-QPRHRHAAAVI-G-SKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPC-- 443 (1057)
Q Consensus 375 yd~~t~~------W~~~~~~g~~p-~~R~~hsa~~~-~-~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~-- 443 (1057)
||+.+.. -.... .... ....-.+.+.. + +.+++.|+.++ .+.+||+.+.+....-.......
T Consensus 141 wd~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 141 WDMNKCTESPSNYTPLTP--GQSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIWDLKAKKEVIHLSYTSPNSGI 213 (416)
T ss_dssp CBTTTTSSCTTTCCCBCC--CCSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEEETTTTEEEEEECCCCCSSCC
T ss_pred EECCCCcccccccccccc--ccccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEEECCCCCcceEEecccccccc
Confidence 8887764 11110 0011 11112233333 2 46777777665 38999998876544322110000
Q ss_pred CcceeEEEEEC--CEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCC-CCceeeEEEEE---CCEEEEEeccCCCC
Q 036185 444 ARHSHSMLAYG--SRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSP-HARFSHTMFLY---KNYLGLFGGCPVRQ 517 (1057)
Q Consensus 444 ~r~~~s~~~~~--~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P-~~R~~hs~~~~---~~~l~i~GG~~~~~ 517 (1057)
...-.+++... ..+++.|+.++. ...+..||+.+..-.. .... .....-.++.+ ++.+++.|+.+
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d--- 284 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNANTPL----QTLNQGHQKGILSLDWCHQDEHLLLSSGRD--- 284 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTSTTSCS----BCCCSCCSSCEEEEEECSSCSSCEEEEESS---
T ss_pred CCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCCCCCc----EEeecCccCceeEEEeCCCCCCeEEEEeCC---
Confidence 11122333332 357777776541 1247788887642110 0111 11111222333 56677777743
Q ss_pred CCCeEEEEECCCCeEE
Q 036185 518 NYQELSLLDLQLHIWK 533 (1057)
Q Consensus 518 ~~~~i~~yd~~~~~W~ 533 (1057)
..+.+||+.+.+-.
T Consensus 285 --g~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 285 --NTVLLWNPESAEQL 298 (416)
T ss_dssp --SEEEEECSSSCCEE
T ss_pred --CCEEEeeCCCCccc
Confidence 36889998876543
No 481
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.05 E-value=8.2 Score=41.52 Aligned_cols=189 Identities=13% Similarity=0.135 Sum_probs=93.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEEC----CEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLIG----DHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~~----~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
..+++.|+.+. .-..+.+||..+++....... .....-.++.... +.+++.|+.++ .+.+||.
T Consensus 31 ~~l~~~~s~~~-----~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~dg------~i~iwd~ 97 (357)
T 3i2n_A 31 AKFVTMGNFAR-----GTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFGG------NLHIWNL 97 (357)
T ss_dssp SEEEEEEC--C-----CCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETTS------CEEEECT
T ss_pred ceEEEecCccC-----CCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCCC------eEEEEeC
Confidence 45777776521 124678888888776544211 1111112222222 46777777654 5888888
Q ss_pred CCCc--EEEeeccCCCCCcccceEEEE-------ECCEEEEEcccCCCcccceEEEEECCCCc--EEEeecCCCCCCCcc
Q 036185 378 AKSK--WTLLECSGSVFQPRHRHAAAV-------IGSKIYVFGGLNNDTIFSSLHVLDTDTLQ--WKELLINGEGPCARH 446 (1057)
Q Consensus 378 ~t~~--W~~~~~~g~~p~~R~~hsa~~-------~~~~iyv~GG~~~~~~~~~v~~yD~~t~~--W~~~~~~g~~P~~r~ 446 (1057)
.+.. ...+. + .. ..-.+... -++..++.|+.++ .+..||+.+.. ...+..... ...+.
T Consensus 98 ~~~~~~~~~~~--~-~~--~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~~~~~~~~~~~~-~~~~~ 166 (357)
T 3i2n_A 98 EAPEMPVYSVK--G-HK--EIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKDDPVANMEPVQG-ENKRD 166 (357)
T ss_dssp TSCSSCSEEEC--C-CS--SCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCSSCSEEECCCTT-SCCCC
T ss_pred CCCCccEEEEE--e-cc--cceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCCCcceeccccCC-CCCCc
Confidence 7664 12221 0 00 01111111 2455777777655 48889988764 344432111 11112
Q ss_pred eeEEE-----EECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE----CCEEEEEeccCCCC
Q 036185 447 SHSML-----AYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY----KNYLGLFGGCPVRQ 517 (1057)
Q Consensus 447 ~~s~~-----~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~----~~~l~i~GG~~~~~ 517 (1057)
-.+++ .-++.+++.|+.++ .+..||+.+..-...... . ..-.++... ++..++.|+.+
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~~~---~--~~v~~~~~~~~~~~~~~l~~~~~d--- 233 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNG-----DIKLFDLRNMALRWETNI---K--NGVCSLEFDRKDISMNKLVATSLE--- 233 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTS-----EEEEEETTTTEEEEEEEC---S--SCEEEEEESCSSSSCCEEEEEEST---
T ss_pred eEEEEEEeccCCCCCEEEEEccCC-----eEEEEECccCceeeecCC---C--CceEEEEcCCCCCCCCEEEEECCC---
Confidence 22222 13566777776543 588999988765332111 1 112222322 45666777633
Q ss_pred CCCeEEEEECCC
Q 036185 518 NYQELSLLDLQL 529 (1057)
Q Consensus 518 ~~~~i~~yd~~~ 529 (1057)
..+.+||+.+
T Consensus 234 --g~i~i~d~~~ 243 (357)
T 3i2n_A 234 --GKFHVFDMRT 243 (357)
T ss_dssp --TEEEEEEEEE
T ss_pred --CeEEEEeCcC
Confidence 3677787755
No 482
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=86.84 E-value=0.47 Score=53.10 Aligned_cols=97 Identities=9% Similarity=0.075 Sum_probs=66.1
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC---Cccc----cCCCCCc
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG---DNRF----TAPKGVA 964 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~---D~~~----~~~~~~~ 964 (1057)
+.+|++||-.++| +|.+++.+|+..|+.+|+++|.+++.++.+++ .|.+ .++.. |..+ ......+
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~v~~~t~g~g~ 236 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE----YGAT---DIINYKNGDIVEQILKATDGKGV 236 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH----HTCC---EEECGGGSCHHHHHHHHTTTCCE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH----hCCc---eEEcCCCcCHHHHHHHHcCCCCC
Confidence 5678999888776 47788888877788679999999998888865 3443 22322 2211 1123358
Q ss_pred cEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 965 NRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 965 D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
|+|+-.. . ....+..+++.|+ ++|.+......
T Consensus 237 D~v~d~~-g-~~~~~~~~~~~l~-~~G~~v~~G~~ 268 (352)
T 3fpc_A 237 DKVVIAG-G-DVHTFAQAVKMIK-PGSDIGNVNYL 268 (352)
T ss_dssp EEEEECS-S-CTTHHHHHHHHEE-EEEEEEECCCC
T ss_pred CEEEECC-C-ChHHHHHHHHHHh-cCCEEEEeccc
Confidence 8887433 3 2356888999998 68888777653
No 483
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.68 E-value=26 Score=38.91 Aligned_cols=148 Identities=11% Similarity=0.124 Sum_probs=76.5
Q ss_pred CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-CCEEEEEcccCCCcccceEEEEECCCCc
Q 036185 353 GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-GSKIYVFGGLNNDTIFSSLHVLDTDTLQ 431 (1057)
Q Consensus 353 ~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~~~iyv~GG~~~~~~~~~v~~yD~~t~~ 431 (1057)
+++.++.|+.++ .+.+||..+.+-...- .+ ....-.+.+.. ++..++.|+.++ .+.+||+.+.+
T Consensus 134 dg~~l~s~~~d~------~i~iwd~~~~~~~~~~-~~---h~~~v~~~~~~p~~~~l~s~s~d~-----~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAEDR------LIRIWDIENRKIVMIL-QG---HEQDIYSLDYFPSGDKLVSGSGDR-----TVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETTS------CEEEEETTTTEEEEEE-CC---CSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTTE
T ss_pred CCCEEEEEcCCC------eEEEEECCCCcEEEEE-cc---CCCCEEEEEEcCCCCEEEEecCCC-----cEEEEECCCCe
Confidence 456777777654 6899999887654332 11 11111222222 455666776654 48889998876
Q ss_pred EEEeecCCCCCCCcceeEEEEE--CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCC-C-CCCceeeEEEEE--CC
Q 036185 432 WKELLINGEGPCARHSHSMLAY--GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAAR-S-PHARFSHTMFLY--KN 505 (1057)
Q Consensus 432 W~~~~~~g~~P~~r~~~s~~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~-~-P~~R~~hs~~~~--~~ 505 (1057)
....-.. . ..-.+++.. ++++++.|+.++ .+..||+.+..-........ . ......-.++.+ ++
T Consensus 199 ~~~~~~~---~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 199 CSLTLSI---E--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp EEEEEEC---S--SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred eEEEEEc---C--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 5443221 1 111222222 567888888765 38888988765433211000 0 001111222333 56
Q ss_pred EEEEEeccCCCCCCCeEEEEECCCC
Q 036185 506 YLGLFGGCPVRQNYQELSLLDLQLH 530 (1057)
Q Consensus 506 ~l~i~GG~~~~~~~~~i~~yd~~~~ 530 (1057)
..++.|+.+ ..+.+||+.+.
T Consensus 269 ~~l~s~s~d-----~~v~~wd~~~~ 288 (393)
T 1erj_A 269 QSVVSGSLD-----RSVKLWNLQNA 288 (393)
T ss_dssp SEEEEEETT-----SEEEEEEC---
T ss_pred CEEEEEeCC-----CEEEEEECCCC
Confidence 677777743 36778887653
No 484
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=86.67 E-value=2 Score=48.58 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=66.9
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCC------ccc----cCCC
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGD------NRF----TAPK 961 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D------~~~----~~~~ 961 (1057)
+.+|++||-.++| +|.+++.+|+..|+.+|++++.+++..+.+++ .|.+ .++..+ ..+ ....
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHHhCC
Confidence 5678999998865 68888888877786689999999999888764 4543 223322 111 1122
Q ss_pred CCccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 962 GVANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 962 ~~~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
..+|+|+-.. . ....+..++++|+ ++|.+.......
T Consensus 266 ~g~Dvvid~~-g-~~~~~~~~~~~l~-~~G~iv~~G~~~ 301 (380)
T 1vj0_A 266 RGADFILEAT-G-DSRALLEGSELLR-RGGFYSVAGVAV 301 (380)
T ss_dssp SCEEEEEECS-S-CTTHHHHHHHHEE-EEEEEEECCCCS
T ss_pred CCCcEEEECC-C-CHHHHHHHHHHHh-cCCEEEEEecCC
Confidence 3588887544 3 2346788899998 688888776543
No 485
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=86.56 E-value=35 Score=40.48 Aligned_cols=190 Identities=17% Similarity=0.121 Sum_probs=97.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEE-EeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEECC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIK-AIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNMA 378 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~-~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~~ 378 (1057)
+.+||.... .+.+.++|+.+++-. .++ ....-|.++.. +.++|+.+ . .+.+.+||+.
T Consensus 167 ~~~~V~~~~--------~~~V~viD~~t~~v~~~i~-----~g~~p~~v~~SpDGr~lyv~~-~------dg~V~viD~~ 226 (567)
T 1qks_A 167 NLFSVTLRD--------AGQIALIDGSTYEIKTVLD-----TGYAVHISRLSASGRYLFVIG-R------DGKVNMIDLW 226 (567)
T ss_dssp GEEEEEETT--------TTEEEEEETTTCCEEEEEE-----CSSCEEEEEECTTSCEEEEEE-T------TSEEEEEETT
T ss_pred ceEEEEeCC--------CCeEEEEECCCCeEEEEEe-----CCCCccceEECCCCCEEEEEc-C------CCeEEEEECC
Confidence 356666542 357999999987644 333 22233444443 44788754 2 2479999995
Q ss_pred --CCcE-EEeeccCCCCCcccceEEEEE-----CC-EEEEEcccCCCcccceEEEEECCCCcEEEeecCCC--------C
Q 036185 379 --KSKW-TLLECSGSVFQPRHRHAAAVI-----GS-KIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGE--------G 441 (1057)
Q Consensus 379 --t~~W-~~~~~~g~~p~~R~~hsa~~~-----~~-~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~--------~ 441 (1057)
+.+- ..++. |. .| ...++. ++ .+|+..-. .+.+.++|..+.+-...-+.+. .
T Consensus 227 ~~t~~~v~~i~~-G~--~P---~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~ 295 (567)
T 1qks_A 227 MKEPTTVAEIKI-GS--EA---RSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYH 295 (567)
T ss_dssp SSSCCEEEEEEC-CS--EE---EEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEE
T ss_pred CCCCcEeEEEec-CC--CC---ceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCcEEEEEecccccccccccc
Confidence 4432 22221 21 12 222333 34 56665432 2457888987765433222111 1
Q ss_pred CCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEE-CC-EEEEEeccCCCCCC
Q 036185 442 PCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLY-KN-YLGLFGGCPVRQNY 519 (1057)
Q Consensus 442 P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~-~~-~l~i~GG~~~~~~~ 519 (1057)
|.+|........++..+++-= ...+.++..|..+.....+.. .+..++.|....- ++ ++|+... ..
T Consensus 296 p~~rva~i~~s~~~~~~vv~~----~~~g~v~~vd~~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~-----~s 363 (567)
T 1qks_A 296 PEPRVAAILASHYRPEFIVNV----KETGKILLVDYTDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN-----AR 363 (567)
T ss_dssp SCCCEEEEEECSSSSEEEEEE----TTTTEEEEEETTCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG-----GG
T ss_pred CCCceEEEEEcCCCCEEEEEe----cCCCeEEEEecCCCccceeee---eeccccccCceECCCCCEEEEEeC-----CC
Confidence 233444333333333333321 223568888887765544322 2334455554433 33 4444432 35
Q ss_pred CeEEEEECCCCeEEE
Q 036185 520 QELSLLDLQLHIWKH 534 (1057)
Q Consensus 520 ~~i~~yd~~~~~W~~ 534 (1057)
+.+.++|+++.+-..
T Consensus 364 n~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 364 NKLVVIDTKEGKLVA 378 (567)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCcEEE
Confidence 689999999987544
No 486
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=86.48 E-value=39 Score=37.54 Aligned_cols=185 Identities=15% Similarity=0.156 Sum_probs=102.3
Q ss_pred ceeeEEEEecCCCcCcccccceEEEEECCccCCcEEEEEcccCCCCCCcccccEEEEeC---CCCc-EEEeccCCCCCCc
Q 036185 269 GLSVSRIVIAGEPVEKLFLWGHSACILGNSINDSQILVFGGFGGMGRHARRNDLFLLDP---LQGT-IKAIHTEGSPSPR 344 (1057)
Q Consensus 269 ~l~w~~l~~~~~~~~~~~R~ghsa~~~~~~~~~~~lyvfGG~~~~g~~~~~~d~~~yd~---~t~~-W~~l~~~~~P~~R 344 (1057)
.-+|..-++..-+.. ---|+.|.+++. -|.+|=+.+.-......-+++-|. -... =+.++ ......-
T Consensus 269 ~spW~~t~L~~i~~v---Te~HSFa~i~~~-----~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~-sey~~~A 339 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSV---TEVHSFATIDNN-----GFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIP-SEYEPDA 339 (670)
T ss_dssp TSCCEEEECCSCTTC---SEEEEEEECSSS-----CEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECC-GGGCTTE
T ss_pred cCCceecccccccce---eeeeeeeEecCC-----ceEEEeccCCCCcceeeEEEecccccCCcceeeeech-hhhcccc
Confidence 457777776655522 334999999988 778886655322211222222111 1111 22222 1222233
Q ss_pred cccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEECCEEEEEcccCC---------
Q 036185 345 LGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNN--------- 415 (1057)
Q Consensus 345 ~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~--------- 415 (1057)
+..+.-.+++.+|+.--...+...-+.+.+-+....+|+.+... -.......-.+.+++.||+||-...
T Consensus 340 sEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp--~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~p 417 (670)
T 3ju4_A 340 SEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFP--HNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAP 417 (670)
T ss_dssp EEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECT--TCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCC
T ss_pred ccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheecc--ccccccCCCcceeCCEEEEEeccccccccccCCC
Confidence 34455567999999764444456667888888889999999632 1122333446678999999986431
Q ss_pred -Cc---ccceEE--EEE-----CCCCcEEEeecC---CCCCCCccee-EEEEECCEE-EEEecCC
Q 036185 416 -DT---IFSSLH--VLD-----TDTLQWKELLIN---GEGPCARHSH-SMLAYGSRL-YMFGGYN 464 (1057)
Q Consensus 416 -~~---~~~~v~--~yD-----~~t~~W~~~~~~---g~~P~~r~~~-s~~~~~~~l-yv~GG~~ 464 (1057)
+. .....+ +.+ .+.-+|..+..+ |..-..-.+. +.|+-++-| |+|||.+
T Consensus 418 D~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 418 DDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp CCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred cccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 11 111222 222 345678888653 3333333444 445556665 5889863
No 487
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=86.45 E-value=0.67 Score=46.94 Aligned_cols=95 Identities=19% Similarity=0.119 Sum_probs=63.8
Q ss_pred cCCCCEEEEec--CcccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC---Ccccc----CCCCC
Q 036185 893 DCKDEVIVDLF--AGIGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG---DNRFT----APKGV 963 (1057)
Q Consensus 893 ~~~g~~VlDlf--~G~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~---D~~~~----~~~~~ 963 (1057)
+.+|++||..+ .|+|...+.+++..|+ +|+++|.+++..+.+++ .+.+ . ++.. |..+. .....
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~-~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE--Y-VGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS--E-EEETTCSTHHHHHHHHTTTCC
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--E-EeeCCcHHHHHHHHHHhCCCC
Confidence 56899999998 4788888887766676 69999999988876653 3443 1 1221 11111 11235
Q ss_pred ccEEEECCCCCChhHHHHHHHHhhCCCcEEEEEccc
Q 036185 964 ANRVCLGLIPTSENSWVTAVQALRSEGGTLHVHGNV 999 (1057)
Q Consensus 964 ~D~Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~ 999 (1057)
+|.|+-+. . ...+..+++.++ ++|.+......
T Consensus 108 ~D~vi~~~-g--~~~~~~~~~~l~-~~G~~v~~g~~ 139 (198)
T 1pqw_A 108 VDVVLNSL-A--GEAIQRGVQILA-PGGRFIELGKK 139 (198)
T ss_dssp EEEEEECC-C--THHHHHHHHTEE-EEEEEEECSCG
T ss_pred CeEEEECC-c--hHHHHHHHHHhc-cCCEEEEEcCC
Confidence 89888665 2 456888888888 68888877653
No 488
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=86.41 E-value=24 Score=41.29 Aligned_cols=152 Identities=9% Similarity=0.019 Sum_probs=79.5
Q ss_pred EEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCcccceEEEEE-C-CEEEEEcccCCCcccceEEEEECCCCcEE
Q 036185 356 MFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQPRHRHAAAVI-G-SKIYVFGGLNNDTIFSSLHVLDTDTLQWK 433 (1057)
Q Consensus 356 Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~R~~hsa~~~-~-~~iyv~GG~~~~~~~~~v~~yD~~t~~W~ 433 (1057)
+++.|+.++ .+.+||..+.+-...- .+.......-.+.+.. + ++.++.|+.++ .+.+||+.+.+..
T Consensus 175 ~l~~~~~d~------~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDDG------SVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDR-----KISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETTT------EEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTC-----CEEEEETTTCCEE
T ss_pred EEEEEeCCC------cEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCCCEe
Confidence 777777653 6888998776543321 1100000012223333 4 66777777665 4899999887754
Q ss_pred EeecCC--CCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEe
Q 036185 434 ELLING--EGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFG 511 (1057)
Q Consensus 434 ~~~~~g--~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~G 511 (1057)
..-... ....+. .++...++..++.|+.++ .+..||+.+......-.....+......++...++..++.|
T Consensus 243 ~~~~~~~~~~~~~v--~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 315 (615)
T 1pgu_A 243 KYIEDDQEPVQGGI--FALSWLDSQKFATVGADA-----TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 315 (615)
T ss_dssp EECCBTTBCCCSCE--EEEEESSSSEEEEEETTS-----EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEE
T ss_pred EEecccccccCCce--EEEEEcCCCEEEEEcCCC-----cEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEE
Confidence 432110 011111 122222777778877653 48899998876544322111111222222222255566677
Q ss_pred ccCCCCCCCeEEEEECCCCe
Q 036185 512 GCPVRQNYQELSLLDLQLHI 531 (1057)
Q Consensus 512 G~~~~~~~~~i~~yd~~~~~ 531 (1057)
+.+ ..+.+||+.+.+
T Consensus 316 ~~~-----g~i~~~d~~~~~ 330 (615)
T 1pgu_A 316 SLD-----GTLNFYELGHDE 330 (615)
T ss_dssp ETT-----SCEEEEETTEEE
T ss_pred ECC-----CCEEEEECCCCc
Confidence 643 368899987743
No 489
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=86.37 E-value=1.7 Score=48.13 Aligned_cols=102 Identities=15% Similarity=0.100 Sum_probs=67.5
Q ss_pred ccCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC---C-CCCccE
Q 036185 892 LDCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA---P-KGVANR 966 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~---~-~~~~D~ 966 (1057)
...+|++||=.+|| +|.+++.+|+..|+..++++|.+++-++.+++ .|.+.-+..-..|..+.. . ...+|.
T Consensus 157 ~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 157 QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcccCCccc
Confidence 35789999988775 67788888888899989999999998888765 565421111112222111 1 233565
Q ss_pred EEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 967 VCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 967 Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|+ +... ....+..++++++ +||.+.++....
T Consensus 233 v~-d~~G-~~~~~~~~~~~l~-~~G~~v~~g~~~ 263 (346)
T 4a2c_A 233 IL-ETAG-VPQTVELAVEIAG-PHAQLALVGTLH 263 (346)
T ss_dssp EE-ECSC-SHHHHHHHHHHCC-TTCEEEECCCCS
T ss_pred cc-cccc-ccchhhhhhheec-CCeEEEEEeccC
Confidence 54 4312 3566888999998 688888887654
No 490
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=86.16 E-value=1 Score=50.82 Aligned_cols=96 Identities=16% Similarity=0.030 Sum_probs=65.9
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC-----CccccCC---CCC
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG-----DNRFTAP---KGV 963 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~-----D~~~~~~---~~~ 963 (1057)
+.+|++||-.+|| +|.+++.+|+..|+++|+++|.+++..+.+++ .|.+ . ++.. |..+.+. ...
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~-~--vi~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT-D--CLNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS-E--EECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc-E--EEccccccchHHHHHHHHhCCC
Confidence 5679999998876 57888888877888789999999998888764 4543 1 2221 1111111 236
Q ss_pred ccEEEECCCCCChhHHHHHHHHhhCCC-cEEEEEcc
Q 036185 964 ANRVCLGLIPTSENSWVTAVQALRSEG-GTLHVHGN 998 (1057)
Q Consensus 964 ~D~Vil~~~P~~~~~~~~a~~~l~~~g-g~l~~~~~ 998 (1057)
+|+|+-.. . ....+..++++|+ ++ |.+.+...
T Consensus 266 ~Dvvid~~-G-~~~~~~~~~~~l~-~~~G~iv~~G~ 298 (376)
T 1e3i_A 266 VDYSLDCA-G-TAQTLKAAVDCTV-LGWGSCTVVGA 298 (376)
T ss_dssp BSEEEESS-C-CHHHHHHHHHTBC-TTTCEEEECCC
T ss_pred ccEEEECC-C-CHHHHHHHHHHhh-cCCCEEEEECC
Confidence 89887443 3 2456888999998 57 88887765
No 491
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=85.97 E-value=42 Score=40.48 Aligned_cols=189 Identities=13% Similarity=0.127 Sum_probs=93.8
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE-CCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI-GDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~-~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
+.+++.|+.++ .+.++|+.++.-...-. .... .-.+++.. ++..++.|+.++ .+.+||....
T Consensus 442 g~~l~sgs~Dg--------~v~vwd~~~~~~~~~~~-~h~~--~v~~~~~s~~~~~l~s~s~D~------~i~iwd~~~~ 504 (694)
T 3dm0_A 442 GQFALSGSWDG--------ELRLWDLAAGVSTRRFV-GHTK--DVLSVAFSLDNRQIVSASRDR------TIKLWNTLGE 504 (694)
T ss_dssp SSEEEEEETTS--------EEEEEETTTTEEEEEEE-CCSS--CEEEEEECTTSSCEEEEETTS------CEEEECTTSC
T ss_pred CCEEEEEeCCC--------cEEEEECCCCcceeEEe-CCCC--CEEEEEEeCCCCEEEEEeCCC------EEEEEECCCC
Confidence 45777777554 57888887765432210 1010 11122222 456667777654 5777886554
Q ss_pred cEEEeeccCCCCCcccceEEEEE--CC--EEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCCCcceeEEEE-ECC
Q 036185 381 KWTLLECSGSVFQPRHRHAAAVI--GS--KIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPCARHSHSMLA-YGS 455 (1057)
Q Consensus 381 ~W~~~~~~g~~p~~R~~hsa~~~--~~--~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~~r~~~s~~~-~~~ 455 (1057)
.-..+... ....+..-.++.+ ++ ..++.|+.++ .+.+||+.+.+....-. + ... .-.+++. -++
T Consensus 505 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~~-~--h~~-~v~~v~~spdg 573 (694)
T 3dm0_A 505 CKYTISEG--GEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRSTLA-G--HTG-YVSTVAVSPDG 573 (694)
T ss_dssp EEEEECSS--TTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEEEC-C--CSS-CEEEEEECTTS
T ss_pred cceeeccC--CCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEEEc-C--CCC-CEEEEEEeCCC
Confidence 32222211 1111112223333 22 3666777665 38889988776543321 0 111 1122222 256
Q ss_pred EEEEEecCCCCcccCcEEEEECCCCeEEEeeccCCCCCCceeeEEEEECCEEEEEeccCCCCCCCeEEEEECCCCeEE
Q 036185 456 RLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAARSPHARFSHTMFLYKNYLGLFGGCPVRQNYQELSLLDLQLHIWK 533 (1057)
Q Consensus 456 ~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~~P~~R~~hs~~~~~~~l~i~GG~~~~~~~~~i~~yd~~~~~W~ 533 (1057)
++++.||.++ .+..||+.+..-... ......-++++...+..++.+|. .+.+.++|+.+..-.
T Consensus 574 ~~l~sg~~Dg-----~i~iwd~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~-----~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 574 SLCASGGKDG-----VVLLWDLAEGKKLYS-----LEANSVIHALCFSPNRYWLCAAT-----EHGIKIWDLESKSIV 636 (694)
T ss_dssp SEEEEEETTS-----BCEEEETTTTEEEEC-----CBCSSCEEEEEECSSSSEEEEEE-----TTEEEEEETTTTEEE
T ss_pred CEEEEEeCCC-----eEEEEECCCCceEEE-----ecCCCcEEEEEEcCCCcEEEEEc-----CCCEEEEECCCCCCh
Confidence 7788888764 478889887754321 11111223333333333344442 235889999887654
No 492
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.93 E-value=19 Score=43.72 Aligned_cols=125 Identities=17% Similarity=0.216 Sum_probs=72.9
Q ss_pred EEEEECCEEEEEcccCCCCCCCCcEEEEECCCCc--EEEeeccCCC--C---CcccceEEEEECCEEEEEcccCCCcccc
Q 036185 348 TSSLIGDHMFIIGGRADPLNILSDVWVFNMAKSK--WTLLECSGSV--F---QPRHRHAAAVIGSKIYVFGGLNNDTIFS 420 (1057)
Q Consensus 348 s~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~--W~~~~~~g~~--p---~~R~~hsa~~~~~~iyv~GG~~~~~~~~ 420 (1057)
+-++.++.||+.... +.++.+|..|.+ |+.-...... + ......+.++.+++||+... -.
T Consensus 72 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg 138 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DG 138 (677)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TS
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CC
Confidence 345679999998652 469999998875 8765311100 0 00112344567888888532 24
Q ss_pred eEEEEECCCCc--EEEeecCCCCCCCcceeEEEEECCEEEEEecCCCCcccCcEEEEECCCCe--EEEe
Q 036185 421 SLHVLDTDTLQ--WKELLINGEGPCARHSHSMLAYGSRLYMFGGYNGEKALGDLYTFDVHACL--WKKE 485 (1057)
Q Consensus 421 ~v~~yD~~t~~--W~~~~~~g~~P~~r~~~s~~~~~~~lyv~GG~~~~~~~~~l~~yd~~t~~--W~~v 485 (1057)
.++.+|..+++ |+.-.............+-++.++.+|+-.+.........++.||..|.+ |+.-
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 59999998775 87653200000011222334568888775443222234679999998765 8764
No 493
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.71 E-value=0.64 Score=52.55 Aligned_cols=97 Identities=14% Similarity=0.057 Sum_probs=67.2
Q ss_pred cCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeC-----CccccC---CCCC
Q 036185 893 DCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEG-----DNRFTA---PKGV 963 (1057)
Q Consensus 893 ~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~-----D~~~~~---~~~~ 963 (1057)
+.+|++||-.+|| +|.+++.+|+..|+.+|+++|.+++.++.+++ .|.+ .++.. |..+.+ ....
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~i~~~~~gg 263 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN---EFVNPKDHDKPIQEVIVDLTDGG 263 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC---EEECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc---EEEccccCchhHHHHHHHhcCCC
Confidence 5678999988876 68888888877888789999999999887764 4554 12222 111111 1236
Q ss_pred ccEEEECCCCCChhHHHHHHHHhhCCC-cEEEEEccc
Q 036185 964 ANRVCLGLIPTSENSWVTAVQALRSEG-GTLHVHGNV 999 (1057)
Q Consensus 964 ~D~Vil~~~P~~~~~~~~a~~~l~~~g-g~l~~~~~~ 999 (1057)
+|+|+-.- . ....+..++++++ +| |.+.+....
T Consensus 264 ~D~vid~~-g-~~~~~~~~~~~l~-~g~G~iv~~G~~ 297 (378)
T 3uko_A 264 VDYSFECI-G-NVSVMRAALECCH-KGWGTSVIVGVA 297 (378)
T ss_dssp BSEEEECS-C-CHHHHHHHHHTBC-TTTCEEEECSCC
T ss_pred CCEEEECC-C-CHHHHHHHHHHhh-ccCCEEEEEccc
Confidence 89887443 3 3456888999998 55 888887764
No 494
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.46 E-value=27 Score=41.04 Aligned_cols=189 Identities=13% Similarity=0.073 Sum_probs=93.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE--CCEEEEEcccCCCCCCCCcEEEEEC--
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI--GDHMFIIGGRADPLNILSDVWVFNM-- 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~--~~~Iyv~GG~~~~~~~~~~v~~yd~-- 377 (1057)
+++|+.+..+ +.+.++|..+++....- +....-|.++.. +.++|+.+. + +.+.+||+
T Consensus 149 ~~~~vs~~~d--------~~V~v~D~~t~~~~~~i----~~g~~~~~v~~spdg~~l~v~~~-d------~~V~v~D~~~ 209 (543)
T 1nir_A 149 NLFSVTLRDA--------GQIALVDGDSKKIVKVI----DTGYAVHISRMSASGRYLLVIGR-D------ARIDMIDLWA 209 (543)
T ss_dssp GEEEEEEGGG--------TEEEEEETTTCCEEEEE----ECSTTEEEEEECTTSCEEEEEET-T------SEEEEEETTS
T ss_pred CEEEEEEcCC--------CeEEEEECCCceEEEEE----ecCcccceEEECCCCCEEEEECC-C------CeEEEEECcC
Confidence 4688877643 46788999887653321 111113444443 346666542 2 57999999
Q ss_pred CCCcEEEeeccCCCCCcccceEEEEE-----CCE-EEEEcccCCCcccceEEEEECCCCcEEEe-ecCCC-------CCC
Q 036185 378 AKSKWTLLECSGSVFQPRHRHAAAVI-----GSK-IYVFGGLNNDTIFSSLHVLDTDTLQWKEL-LINGE-------GPC 443 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~~R~~hsa~~~-----~~~-iyv~GG~~~~~~~~~v~~yD~~t~~W~~~-~~~g~-------~P~ 443 (1057)
.+.+-...- +....-...++. +++ +|+ +++. .+.+.++|..+.+-... +..+. .|.
T Consensus 210 ~t~~~~~~i-----~~g~~p~~va~sp~~~~dg~~l~v-~~~~----~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 210 KEPTKVAEI-----KIGIEARSVESSKFKGYEDRYTIA-GAYW----PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp SSCEEEEEE-----ECCSEEEEEEECCSTTCTTTEEEE-EEEE----SSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred CCCcEEEEE-----ecCCCcceEEeCCCcCCCCCEEEE-EEcc----CCeEEEEeccccccceeecccCcccCccccccC
Confidence 665532211 111222233332 444 554 3322 24578889888764333 22110 122
Q ss_pred CcceeEEEEE-CCEEEEEecCCCCcccCcEEEEECCCCeE---EEeeccCCCCCCceeeEEEEE-CCE-EEEEeccCCCC
Q 036185 444 ARHSHSMLAY-GSRLYMFGGYNGEKALGDLYTFDVHACLW---KKEDIAARSPHARFSHTMFLY-KNY-LGLFGGCPVRQ 517 (1057)
Q Consensus 444 ~r~~~s~~~~-~~~lyv~GG~~~~~~~~~l~~yd~~t~~W---~~v~~~~~~P~~R~~hs~~~~-~~~-l~i~GG~~~~~ 517 (1057)
++........ +..+|+.... .+.++.+|..+..- ..+. .+ +.-+..+.- +++ +|+.+.
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~-~~-----~~~~~~~~spdg~~l~va~~----- 343 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIG-AA-----PFLHDGGWDSSHRYFMTAAN----- 343 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEEEEE-CC-----SSCCCEEECTTSCEEEEEEG-----
T ss_pred CceEEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeEEec-cC-----cCccCceECCCCCEEEEEec-----
Confidence 2323222222 3445554432 35689999876431 1221 12 222223322 444 554432
Q ss_pred CCCeEEEEECCCCeEEEe
Q 036185 518 NYQELSLLDLQLHIWKHL 535 (1057)
Q Consensus 518 ~~~~i~~yd~~~~~W~~v 535 (1057)
..+.+.++|+.+.+-...
T Consensus 344 ~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 344 NSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp GGTEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEe
Confidence 345789999999876543
No 495
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=85.45 E-value=36 Score=40.52 Aligned_cols=113 Identities=20% Similarity=0.269 Sum_probs=62.4
Q ss_pred EEEEEcccCCCCCCcccccEEEEeCCCCc--EEEeccCCCC-CCc---cccEEEEECCEEEEEcccCCCCCCCCcEEEEE
Q 036185 303 QILVFGGFGGMGRHARRNDLFLLDPLQGT--IKAIHTEGSP-SPR---LGHTSSLIGDHMFIIGGRADPLNILSDVWVFN 376 (1057)
Q Consensus 303 ~lyvfGG~~~~g~~~~~~d~~~yd~~t~~--W~~l~~~~~P-~~R---~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd 376 (1057)
+||+.... +.++.+|..+++ |+.-...... .+. ...+.++.+++||+... ...++.+|
T Consensus 70 ~vyv~~~~---------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-------dg~l~AlD 133 (582)
T 1flg_A 70 VIYVTASY---------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-------DASVVALN 133 (582)
T ss_dssp EEEEEETT---------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-------TTEEEEEE
T ss_pred EEEEEcCC---------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-------CCEEEEEE
Confidence 48876652 238999998875 8764321110 011 11234567889887532 24699999
Q ss_pred CCCCc--EEEeeccCCCCCcc--cceEEEEECC------EEEEEcccCC-CcccceEEEEECCCCc--EEEe
Q 036185 377 MAKSK--WTLLECSGSVFQPR--HRHAAAVIGS------KIYVFGGLNN-DTIFSSLHVLDTDTLQ--WKEL 435 (1057)
Q Consensus 377 ~~t~~--W~~~~~~g~~p~~R--~~hsa~~~~~------~iyv~GG~~~-~~~~~~v~~yD~~t~~--W~~~ 435 (1057)
..|.+ |+.-.. .+... ...+.++.++ .+|+ |...+ ...-..++.||+.+.+ |+..
T Consensus 134 ~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 134 KNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp SSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeecC
Confidence 98875 876421 11111 1223344555 5554 33211 1224579999998775 8653
No 496
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=85.22 E-value=16 Score=43.79 Aligned_cols=222 Identities=10% Similarity=-0.010 Sum_probs=111.0
Q ss_pred ccEEEEeCC--C-CcEEEeccCCCC---CCccccEEEE-ECCEEEEEcccCC----CCCCCCcEEEEECCC------CcE
Q 036185 320 NDLFLLDPL--Q-GTIKAIHTEGSP---SPRLGHTSSL-IGDHMFIIGGRAD----PLNILSDVWVFNMAK------SKW 382 (1057)
Q Consensus 320 ~d~~~yd~~--t-~~W~~l~~~~~P---~~R~~hs~v~-~~~~Iyv~GG~~~----~~~~~~~v~~yd~~t------~~W 382 (1057)
..+|.+|.. + +....+. ..+ ......+.+. -+++.+++...+. +.....+++++|..+ ...
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~--~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 179 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLT--PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV 179 (662)
T ss_dssp CCEEEECTTSTTCCCCEECS--CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS
T ss_pred CeEEEEcCCCCCCCCCEecc--CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce
Confidence 568999987 4 6665554 222 1111122222 2454444444321 112336899999988 665
Q ss_pred EEeeccCCCCCcccceEEEE-ECCEEEEEcccCCCc---ccceEEEEECC-CC---cEEEeecCCCCCCCcceeEEE-EE
Q 036185 383 TLLECSGSVFQPRHRHAAAV-IGSKIYVFGGLNNDT---IFSSLHVLDTD-TL---QWKELLINGEGPCARHSHSML-AY 453 (1057)
Q Consensus 383 ~~~~~~g~~p~~R~~hsa~~-~~~~iyv~GG~~~~~---~~~~v~~yD~~-t~---~W~~~~~~g~~P~~r~~~s~~-~~ 453 (1057)
..+...+ .......+. -+++.+++...+... ...+++++|+. +. ....+... . ........ .-
T Consensus 180 ~~l~~~~----~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~---~-~~~~~~~~~sp 251 (662)
T 3azo_A 180 RELSDDA----HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG---P-EEAIAQAEWAP 251 (662)
T ss_dssp EESSCSC----SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE---T-TBCEEEEEECT
T ss_pred eEEEecC----CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC---C-CceEcceEECC
Confidence 5543011 111111122 255544444433211 13579999998 56 44444321 0 11112222 22
Q ss_pred CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccCC-CCCCce---eeEEEEE-CCEEEEEeccCCCCCCCeEEEEECC
Q 036185 454 GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAAR-SPHARF---SHTMFLY-KNYLGLFGGCPVRQNYQELSLLDLQ 528 (1057)
Q Consensus 454 ~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~~-~P~~R~---~hs~~~~-~~~l~i~GG~~~~~~~~~i~~yd~~ 528 (1057)
++++|+.+..++ ...+|.+|+.+..|..+..... ...+.. ..+.+.. ++++++.+.. ....+|.+|+.
T Consensus 252 dg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~d~~ 324 (662)
T 3azo_A 252 DGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK----GAAVLGILDPE 324 (662)
T ss_dssp TSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS----SSCEEEEEETT
T ss_pred CCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc----CccEEEEEECC
Confidence 567777665443 3479999998888887633111 000111 1122333 5677666653 34589999999
Q ss_pred CCeEEEeeccCCCCCcccceEE-EEeCCEEEEEeCC
Q 036185 529 LHIWKHLKLNYVCKELFVRSTA-NVVDDDLIMIGGG 563 (1057)
Q Consensus 529 ~~~W~~v~~~~~~~~~~~~~~a-~~~~~~iyi~GGg 563 (1057)
+...+.+.... . .. ... ..-++.+++..++
T Consensus 325 ~~~~~~l~~~~---~-~~-~~~~s~~~~~~~~~~~~ 355 (662)
T 3azo_A 325 SGELVDAAGPW---T-EW-AATLTVSGTRAVGVAAS 355 (662)
T ss_dssp TTEEEECCSSC---C-EE-EEEEEEETTEEEEEEEE
T ss_pred CCcEEEecCCC---C-eE-EEEEecCCCEEEEEEcC
Confidence 88877764321 1 11 122 3346666666554
No 497
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=85.21 E-value=7.2 Score=42.03 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=56.9
Q ss_pred cEEEEEcccCCCCCCcccccEEEEeCCCCcEEEeccCCCCCCccccEEEEE----CCEEEEEcccCCCCCCCCcEEEEEC
Q 036185 302 SQILVFGGFGGMGRHARRNDLFLLDPLQGTIKAIHTEGSPSPRLGHTSSLI----GDHMFIIGGRADPLNILSDVWVFNM 377 (1057)
Q Consensus 302 ~~lyvfGG~~~~g~~~~~~d~~~yd~~t~~W~~l~~~~~P~~R~~hs~v~~----~~~Iyv~GG~~~~~~~~~~v~~yd~ 377 (1057)
++.++.|+.++ .+.++|+.++....+.. +......-.++.. ++.+++.|+.++ .+.+||+
T Consensus 25 g~~lasgs~D~--------~v~lwd~~~~~~~~~~~--l~gH~~~V~~v~~~~~~~~~~l~s~s~D~------~v~iWd~ 88 (316)
T 3bg1_A 25 GTRLATCSSDR--------SVKIFDVRNGGQILIAD--LRGHEGPVWQVAWAHPMYGNILASCSYDR------KVIIWRE 88 (316)
T ss_dssp GCEEEEEETTT--------EEEEEEEETTEEEEEEE--EECCSSCEEEEEECCGGGSSCEEEEETTS------CEEEECC
T ss_pred CCEEEEEeCCC--------eEEEEEecCCCcEEEEE--EcCCCccEEEEEeCCCCCCCEEEEEECCC------EEEEEEC
Confidence 35777777554 46677776654332221 1111111122222 256777777654 5888999
Q ss_pred CCCcEEEeeccCCCCCcccceEEEEE-C--CEEEEEcccCCCcccceEEEEECCCC-cEEEe
Q 036185 378 AKSKWTLLECSGSVFQPRHRHAAAVI-G--SKIYVFGGLNNDTIFSSLHVLDTDTL-QWKEL 435 (1057)
Q Consensus 378 ~t~~W~~~~~~g~~p~~R~~hsa~~~-~--~~iyv~GG~~~~~~~~~v~~yD~~t~-~W~~~ 435 (1057)
.+..|..+...... ...-.+.+.. + +.+++.|+.++. +..||..+. .|...
T Consensus 89 ~~~~~~~~~~~~~h--~~~V~~v~~~p~~~g~~lasgs~D~~-----i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 89 ENGTWEKSHEHAGH--DSSVNSVCWAPHDYGLILACGSSDGA-----ISLLTYTGEGQWEVK 143 (316)
T ss_dssp SSSCCCEEEEECCC--SSCCCEEEECCTTTCSCEEEECSSSC-----EEEEEECSSSCEEEC
T ss_pred CCCcceEEEEccCC--CCceEEEEECCCCCCcEEEEEcCCCC-----EEEEecCCCCCccee
Confidence 88777554321000 1111222222 2 457777776653 677777665 56543
No 498
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=85.02 E-value=42 Score=35.51 Aligned_cols=219 Identities=9% Similarity=-0.007 Sum_probs=104.7
Q ss_pred E-EEEEcccCCCCCCcccccEEEEeC-CCCcEEEeccCCCCCCccccEEEEECCEEEEEcccCCCCCCCCcEEEEECCCC
Q 036185 303 Q-ILVFGGFGGMGRHARRNDLFLLDP-LQGTIKAIHTEGSPSPRLGHTSSLIGDHMFIIGGRADPLNILSDVWVFNMAKS 380 (1057)
Q Consensus 303 ~-lyvfGG~~~~g~~~~~~d~~~yd~-~t~~W~~l~~~~~P~~R~~hs~v~~~~~Iyv~GG~~~~~~~~~~v~~yd~~t~ 380 (1057)
. .++.|+.++ .+.+||+ .+.....+. ..+....-.++....+..++.|+.++ .+.+||+.+.
T Consensus 69 ~~~l~~~~~dg--------~i~~wd~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~l~s~~~d~------~i~iwd~~~~ 132 (342)
T 1yfq_A 69 DLQIYVGTVQG--------EILKVDLIGSPSFQALT--NNEANLGICRICKYGDDKLIAASWDG------LIEVIDPRNY 132 (342)
T ss_dssp SEEEEEEETTS--------CEEEECSSSSSSEEECB--SCCCCSCEEEEEEETTTEEEEEETTS------EEEEECHHHH
T ss_pred CcEEEEEcCCC--------eEEEEEeccCCceEecc--ccCCCCceEEEEeCCCCEEEEEcCCC------eEEEEccccc
Confidence 5 667777543 5889999 888776554 20011111223333355666666543 5788876540
Q ss_pred c-------EEEeeccCCCCCcccceEEEEECCEEEEEcccCCCcccceEEEEECCC-Cc--EEEeecCCCCCCCcceeEE
Q 036185 381 K-------WTLLECSGSVFQPRHRHAAAVIGSKIYVFGGLNNDTIFSSLHVLDTDT-LQ--WKELLINGEGPCARHSHSM 450 (1057)
Q Consensus 381 ~-------W~~~~~~g~~p~~R~~hsa~~~~~~iyv~GG~~~~~~~~~v~~yD~~t-~~--W~~~~~~g~~P~~r~~~s~ 450 (1057)
. ...+. ....+..-.+++...+. ++.|+.++ .+..||+.+ .. ...... +....-.++
T Consensus 133 ~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~-l~~~~~d~-----~i~i~d~~~~~~~~~~~~~~----~~~~~i~~i 199 (342)
T 1yfq_A 133 GDGVIAVKNLNSN---NTKVKNKIFTMDTNSSR-LIVGMNNS-----QVQWFRLPLCEDDNGTIEES----GLKYQIRDV 199 (342)
T ss_dssp TTBCEEEEESCSS---SSSSCCCEEEEEECSSE-EEEEESTT-----EEEEEESSCCTTCCCEEEEC----SCSSCEEEE
T ss_pred ccccccccCCeee---EEeeCCceEEEEecCCc-EEEEeCCC-----eEEEEECCccccccceeeec----CCCCceeEE
Confidence 0 11111 12222222333334555 55565543 588999887 43 333322 111122233
Q ss_pred EEE--CCEEEEEecCCCCcccCcEEEEECCCC--------eEEEeeccCCCCC---CceeeEEEEE--CCEEEEEeccCC
Q 036185 451 LAY--GSRLYMFGGYNGEKALGDLYTFDVHAC--------LWKKEDIAARSPH---ARFSHTMFLY--KNYLGLFGGCPV 515 (1057)
Q Consensus 451 ~~~--~~~lyv~GG~~~~~~~~~l~~yd~~t~--------~W~~v~~~~~~P~---~R~~hs~~~~--~~~l~i~GG~~~ 515 (1057)
... ++..++.|+.++ .+..||.... ..... .....+. ....-.++.+ ++.+++.|+.+
T Consensus 200 ~~~~~~~~~l~~~~~dg-----~i~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 272 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDG-----RVAVEFFDDQGDDYNSSKRFAFR-CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD- 272 (342)
T ss_dssp EECSGGGCEEEEEETTS-----EEEEEECCTTCCSTTCTTCEEEE-CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT-
T ss_pred EECCCCCCEEEEEecCC-----cEEEEEEcCCCcccccccceeee-cccccccccccceeEEEEEEcCCCCEEEEecCC-
Confidence 333 466777777654 3455454332 22221 1111000 0111222233 56667777743
Q ss_pred CCCCCeEEEEECCCCeEEEeeccCCCCCcccceEEEEeCCEEEEEeCCCc
Q 036185 516 RQNYQELSLLDLQLHIWKHLKLNYVCKELFVRSTANVVDDDLIMIGGGAA 565 (1057)
Q Consensus 516 ~~~~~~i~~yd~~~~~W~~v~~~~~~~~~~~~~~a~~~~~~iyi~GGg~~ 565 (1057)
..+.+||+.+.+....- ........ .+.+ .++.+++.||.+.
T Consensus 273 ----g~i~vwd~~~~~~~~~~--~~~h~~~v-~~~~-~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 273 ----GIISCWNLQTRKKIKNF--AKFNEDSV-VKIA-CSDNILCLATSDD 314 (342)
T ss_dssp ----SCEEEEETTTTEEEEEC--CCCSSSEE-EEEE-ECSSEEEEEEECT
T ss_pred ----ceEEEEcCccHhHhhhh--hcccCCCc-eEec-CCCCeEEEEecCC
Confidence 36899999887654321 11101111 2233 6777888887654
No 499
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=84.97 E-value=1.7 Score=48.22 Aligned_cols=101 Identities=16% Similarity=0.057 Sum_probs=67.7
Q ss_pred ccCCCCEEEEecCc-ccHhHHHHHHhCCCcEEEEEecCHHHHHHHHHHHHHcCCCccEEEEeCCccccC----CCCCccE
Q 036185 892 LDCKDEVIVDLFAG-IGYFVLPFLVRAKARLVYACEWNPCAVEALKHNLQANSVSDHCIVLEGDNRFTA----PKGVANR 966 (1057)
Q Consensus 892 ~~~~g~~VlDlf~G-~G~fsl~~a~~~~a~~V~avD~n~~ai~~~~~N~~~N~~~~~v~~~~~D~~~~~----~~~~~D~ 966 (1057)
.+.+|++||-.++| +|.+++.+|+..|+.+|+++|.+++-.+.+++ .|.+ .+.-...|..+.+ ....+|+
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~-~~i~~~~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGAD-AAVKSGAGAADAIRELTGGQGATA 242 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCS-EEEECSTTHHHHHHHHHGGGCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCC-EEEcCCCcHHHHHHHHhCCCCCeE
Confidence 46789999988775 47788888866667789999999999988865 4554 2221122221111 1235787
Q ss_pred EEECCCCCChhHHHHHHHHhhCCCcEEEEEcccc
Q 036185 967 VCLGLIPTSENSWVTAVQALRSEGGTLHVHGNVK 1000 (1057)
Q Consensus 967 Vil~~~P~~~~~~~~a~~~l~~~gg~l~~~~~~~ 1000 (1057)
|+=.. . ....+..+++.|+ ++|.+.+.....
T Consensus 243 v~d~~-G-~~~~~~~~~~~l~-~~G~iv~~G~~~ 273 (345)
T 3jv7_A 243 VFDFV-G-AQSTIDTAQQVVA-VDGHISVVGIHA 273 (345)
T ss_dssp EEESS-C-CHHHHHHHHHHEE-EEEEEEECSCCT
T ss_pred EEECC-C-CHHHHHHHHHHHh-cCCEEEEECCCC
Confidence 76443 3 3447889999998 688888876543
No 500
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.94 E-value=34 Score=38.04 Aligned_cols=191 Identities=14% Similarity=0.103 Sum_probs=102.1
Q ss_pred EEEEeCCC--CcEEEeccCCCCCCccccEEEEE---CCEEEEEcccCCCCCCCCcEEEEECCCCcEEEeeccCCCCCc--
Q 036185 322 LFLLDPLQ--GTIKAIHTEGSPSPRLGHTSSLI---GDHMFIIGGRADPLNILSDVWVFNMAKSKWTLLECSGSVFQP-- 394 (1057)
Q Consensus 322 ~~~yd~~t--~~W~~l~~~~~P~~R~~hs~v~~---~~~Iyv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~g~~p~~-- 394 (1057)
++.++... .+|..+.. .+....-++++.. .+.||+.+.... .-.-+++.+-...+|+.+......+..
T Consensus 33 l~~~~~~~~g~~W~~~~~--~~~~~~v~~i~~dp~~~~~l~~g~~~g~---~g~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP--VFLGHTIHHIVQDPREPERMLMAARTGH---LGPTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEECTTSCSEEEEEE--ESTTSEEEEEEECSSSTTCEEEEEEC-----CCEEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred eEEEECCCCCCCceECCc--cCCCCceEEEEECCCCCCeEEEEecCCC---CCccEEEeCCCCCCceECCccccCCCccc
Confidence 67777654 68997641 1222233444444 457887654311 112578877777899988632111111
Q ss_pred c-----cce--EEEEE----CCEEEEEcccCCCcccceEEEEECCCCcEEEeecCCCCCC--------------CcceeE
Q 036185 395 R-----HRH--AAAVI----GSKIYVFGGLNNDTIFSSLHVLDTDTLQWKELLINGEGPC--------------ARHSHS 449 (1057)
Q Consensus 395 R-----~~h--sa~~~----~~~iyv~GG~~~~~~~~~v~~yD~~t~~W~~~~~~g~~P~--------------~r~~~s 449 (1057)
+ ..+ +.++. .+.+|+.+. ...+++.+-...+|+.+......|. ...-++
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~ 181 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHS 181 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEE
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeE
Confidence 1 111 22222 456776542 1247888777889999854211121 112234
Q ss_pred EEEE---CCEEEEEecCCCCcccCcEEEEECCCCeEEEeeccC---CCCCC-----ceeeEEEEEC---CEEEEEeccCC
Q 036185 450 MLAY---GSRLYMFGGYNGEKALGDLYTFDVHACLWKKEDIAA---RSPHA-----RFSHTMFLYK---NYLGLFGGCPV 515 (1057)
Q Consensus 450 ~~~~---~~~lyv~GG~~~~~~~~~l~~yd~~t~~W~~v~~~~---~~P~~-----R~~hs~~~~~---~~l~i~GG~~~ 515 (1057)
++.. .+.||+..+. ..+++.+-...+|+.+.... .+|.+ ...++++... +.||+-.+
T Consensus 182 i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--- 252 (394)
T 3b7f_A 182 ILVDPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--- 252 (394)
T ss_dssp EEECTTCTTCEEEEEET------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---
T ss_pred EEECCCCCCEEEEEECC------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---
Confidence 4433 2567775432 23777777788999874311 12221 2234444432 56666322
Q ss_pred CCCCCeEEEEECCCCeEEEee
Q 036185 516 RQNYQELSLLDLQLHIWKHLK 536 (1057)
Q Consensus 516 ~~~~~~i~~yd~~~~~W~~v~ 536 (1057)
..+++.+-...+|+.+.
T Consensus 253 ----~gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 253 ----CGIYRMDRREGVWKRIG 269 (394)
T ss_dssp ----TEEEEEETTTTEEECGG
T ss_pred ----CeEEEeCCCCCcceECC
Confidence 35899998899999885
Done!