BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036189
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZ13|Y1816_ARATH Uncharacterized protein At1g08160 OS=Arabidopsis thaliana
GN=At1g08160 PE=2 SV=1
Length = 221
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/160 (19%), Positives = 67/160 (41%), Gaps = 10/160 (6%)
Query: 69 LMYFTLGPKLPSLHLDTFSVSNFTIGSTN--LIAKWDFNLTFKNPDHLWQIYLDYIECIA 126
+ Y TL PK ++ SV F IG+ + + AK+ + + NP+ + +
Sbjct: 57 ITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEKHVSVRYHSMRIST 116
Query: 127 LNHDHFPIAINHSVSPPFKVKPMKKSTIHVQLATGDSLIFLNHQLLQKINSQRRNGRMVV 186
+H+ ++ H PFK +P ++ I QL + + + L+ + + +++ G
Sbjct: 117 AHHNQ---SVAHKNISPFKQRPKNETRIETQLVSHN--VALSKFNARDLRAEKSKG---T 168
Query: 187 FGLAVRAKTRFTGVSWLWWTEFANLMYTCLDLKVGFKGLS 226
+ V R + +W++ + L C + + S
Sbjct: 169 IEMEVYITARVSYKTWIFRSRRRTLKAVCTPVMINVTSSS 208
>sp|O51363|SYP_BORBU Proline--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210 /
B31 / CIP 102532 / DSM 4680) GN=proS PE=1 SV=1
Length = 488
Score = 35.0 bits (79), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 108 FKNPDHLWQIYLDYIECI--ALNHDHFPIAINHSV--SPPFKVKPMKKSTIHVQLATGDS 163
FK D + + LDY +C+ AL F + I+ V SP F+ + I ++L G +
Sbjct: 294 FKKEDEINKKILDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGIN 353
Query: 164 LIFLNHQLLQKINSQRR 180
+ LN + + + R+
Sbjct: 354 DVLLNSVTISRRDKDRK 370
>sp|B7J1X2|SYP_BORBZ Proline--tRNA ligase OS=Borrelia burgdorferi (strain ZS7) GN=proS
PE=3 SV=1
Length = 488
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 108 FKNPDHLWQIYLDYIECI--ALNHDHFPIAINHSV--SPPFKVKPMKKSTIHVQLATGDS 163
FK D + + LDY +C+ AL F + I+ V SP F+ + I ++L G +
Sbjct: 294 FKKEDEINKKILDYCDCVVDALKKAGFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGIN 353
Query: 164 LIFLNHQLLQKINSQRR 180
+ LN + + + R+
Sbjct: 354 DVLLNSVTISRRDKDRK 370
>sp|Q661L6|SYP_BORGA Proline--tRNA ligase OS=Borrelia garinii (strain PBi) GN=proS PE=3
SV=1
Length = 488
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 108 FKNPDHLWQIYLDYIECI--ALNHDHFPIAINHSV--SPPFKVKPMKKSTIHVQLATGDS 163
FK D + + LDY +C+ AL F + I+ V SP F+ + I +++ G +
Sbjct: 294 FKKEDEINKKILDYSDCVVHALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRIEVGIN 353
Query: 164 LIFLNHQLLQKINSQRR 180
+ LN + + + R+
Sbjct: 354 DVLLNSVTIMRRDKDRK 370
>sp|C4YSJ2|ASA1_CANAW ASTRA-associated protein 1 OS=Candida albicans (strain WO-1)
GN=ASA1 PE=3 SV=1
Length = 377
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 91 FTIGSTNLIAKWDFNLTFKNPDHLWQIYLDYIECIALNHDHFPIAINHSVSPPFKV 146
FT S+ LI WD LT + P WQ + D I I+ H+H + HS K+
Sbjct: 29 FTADSSGLIINWD--LTIRRPKKSWQAHTDTILTISTIHNHL---LTHSRDNTIKI 79
>sp|Q5ABV4|ASA1_CANAL ASTRA-associated protein 1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ASA1 PE=3 SV=1
Length = 377
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 91 FTIGSTNLIAKWDFNLTFKNPDHLWQIYLDYIECIALNHDHFPIAINHSVSPPFKV 146
FT S+ LI WD L + P WQ + D I I+ H+H + HS K+
Sbjct: 29 FTADSSGLIINWD--LAIRRPKKSWQAHTDTILTISTIHNHL---LTHSRDNTIKI 79
>sp|O22340|TPSDA_ABIGR Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1
Length = 637
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 84 DTFSVSNFTIGSTNLIAKWDFNLTFKNPDHLWQIYLDYIECI 125
DTF N T+ I +WD + T P+++ +Y+D +CI
Sbjct: 392 DTFGTMNELQLFTDAIKRWDLSTTRWLPEYMKGVYMDLYQCI 433
>sp|O68215|SACB2_NEIMD Capsular polysaccharide phosphotransferase SacB OS=Neisseria
meningitidis serogroup A GN=sacB PE=1 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 7 IQNSAHRCPSKVYPLTTGDISQLPPSR------PPHYQHFQ--IKKLPKLIIITLLVVAA 58
+NS+H + + + S L +R P ++ +F+ +KKL I + ++ +
Sbjct: 40 FKNSSHIHKTNISKAQSNISSTLKENRKQDMLIPINFFNFEYIVKKLNNQNAIGVYILPS 99
Query: 59 SISLTALICILMYFTLGPKLPSLHLDTFSVSNFTIGSTNLIAKWDFNLTFKNPDHLWQIY 118
+++L +CIL S D + TI S NL ++ FN KNP + +I+
Sbjct: 100 NLTLKPALCIL---------ESHKEDFLNKFLLTISSENLKLQYKFNGQIKNPKSVNEIW 150
Query: 119 LD 120
D
Sbjct: 151 TD 152
>sp|Q9JWW8|SACB_NEIMA Capsular polysaccharide phosphotransferase SacB OS=Neisseria
meningitidis serogroup A / serotype 4A (strain Z2491)
GN=sacB PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 7 IQNSAHRCPSKVYPLTTGDISQLPPSR------PPHYQHFQ--IKKLPKLIIITLLVVAA 58
+NS+H + + + S L +R P ++ +F+ +KKL I + ++ +
Sbjct: 40 FKNSSHIHKTNISKAQSNISSTLKQNRKQDMLIPINFFNFEYIVKKLNNQNAIGVYILPS 99
Query: 59 SISLTALICILMYFTLGPKLPSLHLDTFSVSNFTIGSTNLIAKWDFNLTFKNPDHLWQIY 118
+++L +CIL S D + TI S NL ++ FN KNP + +I+
Sbjct: 100 NLTLKPALCIL---------ESHKEDFLNKFLLTISSENLKLQYKFNGQIKNPKSVNEIW 150
Query: 119 LD 120
D
Sbjct: 151 TD 152
>sp|Q83U59|SACB3_NEIMD Capsular polysaccharide phosphotransferase SacB OS=Neisseria
meningitidis serogroup A GN=sacB PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 7 IQNSAHRCPSKVYPLTTGDISQLPPSR------PPHYQHFQ--IKKLPKLIIITLLVVAA 58
+NS+H + + + S L +R P ++ +F+ +KKL I + ++ +
Sbjct: 40 FKNSSHIHKTNISKAQSNISSTLKQNRKQDMLIPINFFNFEYIVKKLNNQNAIGVYILPS 99
Query: 59 SISLTALICILMYFTLGPKLPSLHLDTFSVSNFTIGSTNLIAKWDFNLTFKNPDHLWQIY 118
+++L +CIL S D + TI S NL ++ FN KNP + +I+
Sbjct: 100 NLTLKPALCIL---------ESHKEDFLNKFLLTISSENLKLQYKFNGQIKNPKSVNEIW 150
Query: 119 LD 120
D
Sbjct: 151 TD 152
>sp|Q84CZ9|SACB4_NEIMD Capsular polysaccharide phosphotransferase SacB OS=Neisseria
meningitidis serogroup A GN=sacB PE=3 SV=1
Length = 545
Score = 30.8 bits (68), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 17/122 (13%)
Query: 7 IQNSAHRCPSKVYPLTTGDISQLPPSR------PPHYQHFQ--IKKLPKLIIITLLVVAA 58
+NS+H + + + S L +R P ++ +F+ +KKL I + ++ +
Sbjct: 40 FKNSSHIHKTNISKAQSNISSTLKQNRKQDMLIPINFFNFEYIVKKLNNQNAIGVYILPS 99
Query: 59 SISLTALICILMYFTLGPKLPSLHLDTFSVSNFTIGSTNLIAKWDFNLTFKNPDHLWQIY 118
+++L +CIL S D + TI S NL ++ FN KNP + +I+
Sbjct: 100 NLTLKPALCIL---------ESHKEDFLNKFLLTISSENLKLQYKFNGQIKNPKSVNEIW 150
Query: 119 LD 120
D
Sbjct: 151 TD 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,993,509
Number of Sequences: 539616
Number of extensions: 3446027
Number of successful extensions: 9270
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 9269
Number of HSP's gapped (non-prelim): 13
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)