BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036196
         (271 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LT67|BH113_ARATH Transcription factor bHLH113 OS=Arabidopsis thaliana GN=BHLH113
           PE=2 SV=1
          Length = 270

 Score =  176 bits (446), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 149/268 (55%), Gaps = 37/268 (13%)

Query: 10  EQGSTTSFSQLLFSDDVVLGL-----------DFNNYACSSVFSANEKPPKMLCF-GDYN 57
           E    TSFS+LL   D VL             D    +   VFS  +   +MLCF G Y 
Sbjct: 15  EAEGVTSFSELLMFSDGVLSSSSDHQPEGNVGDGGEDSLGFVFSG-KTGSRMLCFSGGY- 72

Query: 58  KQNDGDIVVYGETTATAAATPKS----GITCSDSSSASSGNNSSANTPSKSTKKRNGSAQ 113
            QND + +    +  T+  +        I C +S+ A + + S+ +    STKKR G+  
Sbjct: 73  -QNDDESLFLEPSVPTSGVSDLDPSCIKIDCRNSNDACTVDKSTKS----STKKRTGTGN 127

Query: 114 ESVPRSNLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKT 173
                 N          ++  KK K     SS   AK +KE+LG+RI ALQQLVSP+GKT
Sbjct: 128 GQESDQN----------RKPGKKGKRNQEKSSVGIAKVRKERLGERIAALQQLVSPYGKT 177

Query: 174 DTASVLHEAMGYIRFLHDQVQVLCSPYLQHHQHEGGENGGE----ESRKDLKSKGLCLVP 229
           D ASVLHEAMGYI+FL DQ+QVLCSPYL +H  +GG   G+       KDL+S+GLCLVP
Sbjct: 178 DAASVLHEAMGYIKFLQDQIQVLCSPYLINHSLDGGVVTGDVMAAMKAKDLRSRGLCLVP 237

Query: 230 VACTVHVANSNGADFWAPAMGSNVSSPA 257
           V+ TVHV NSNGADFW+PA   + +SP+
Sbjct: 238 VSSTVHVENSNGADFWSPATMGHTTSPS 265


>sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68 OS=Arabidopsis thaliana GN=BHLH68 PE=2
           SV=2
          Length = 407

 Score =  141 bits (355), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 73/158 (46%), Positives = 93/158 (58%), Gaps = 39/158 (24%)

Query: 133 TSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQ 192
           T+KK +   +PSS +  K +KEKLG RI AL QLVSPFGKTDTASVL EA+GYIRFL  Q
Sbjct: 246 TNKKPRLQPSPSSQSTLKVRKEKLGGRIAALHQLVSPFGKTDTASVLSEAIGYIRFLQSQ 305

Query: 193 VQVLCSPY--------LQHHQHEGG-------------------------------ENGG 213
           ++ L  PY        ++H QH  G                               +N  
Sbjct: 306 IEALSHPYFGTTASGNMRHQQHLQGDRSCIFPEDPGQLVNDQCMKRRGASSSSTDNQNAS 365

Query: 214 EESRKDLKSKGLCLVPVACTVHVANSNGADFWAPAMGS 251
           EE +KDL+S+GLCLVP++CT+ V + NGAD+WAPA+GS
Sbjct: 366 EEPKKDLRSRGLCLVPISCTLQVGSDNGADYWAPALGS 403


>sp|Q7XHI5|BH133_ARATH Transcription factor bHLH133 OS=Arabidopsis thaliana GN=BHLH133
           PE=2 SV=1
          Length = 362

 Score =  132 bits (332), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 86/150 (57%), Gaps = 39/150 (26%)

Query: 143 PSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYL- 201
           PSS +  K +KEKLG RI +L QLVSPFGKTDTASVL EA+GYIRFLH Q++ L  PY  
Sbjct: 212 PSSQSTLKVRKEKLGGRIASLHQLVSPFGKTDTASVLSEAIGYIRFLHSQIEALSLPYFG 271

Query: 202 ------QHHQH-----------EGGE---------------------NGGEESRKDLKSK 223
                   HQH           + G+                     N  EE  KDL+S+
Sbjct: 272 TPSRNNMMHQHAQRNMNGIFPEDPGQLVNEYCMKRGVSLSSTDNQKSNPNEEPMKDLRSR 331

Query: 224 GLCLVPVACTVHVANSNGADFWAPAMGSNV 253
           GLCLVP++CT+ V + NGAD+WAPA G+ +
Sbjct: 332 GLCLVPISCTLQVGSDNGADYWAPAFGTTL 361


>sp|Q94JL3|BH112_ARATH Transcription factor bHLH112 OS=Arabidopsis thaliana GN=BHLH112
           PE=2 SV=1
          Length = 393

 Score =  122 bits (305), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 86/165 (52%), Gaps = 40/165 (24%)

Query: 124 TTSPVVSQRTSKKTK-------------AADN-----------PSSTAHAKAKKEKLGDR 159
           TT  ++S R   KTK             A DN           PS     K +KE L D+
Sbjct: 230 TTPQIISTRLEDKTKNLKTRAQSESLKRAKDNESAAKKPRVTTPSPLPTFKVRKENLRDQ 289

Query: 160 ITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQHHQHEGGENGG------ 213
           IT+LQQLVSPFGKTDTASVL EA+ YI+FLHDQV VL +PY++    +G  N        
Sbjct: 290 ITSLQQLVSPFGKTDTASVLQEAIEYIKFLHDQVTVLSTPYMK----QGASNQQQQQISG 345

Query: 214 ------EESRKDLKSKGLCLVPVACTVHVANSNGADFWAPAMGSN 252
                 E    +L+  GLCLVP++ T  VAN   ADFW P  G N
Sbjct: 346 KSKSQDENENHELRGHGLCLVPISSTFPVANETTADFWTPTFGGN 390


>sp|Q8GXT3|BH123_ARATH Transcription factor bHLH123 OS=Arabidopsis thaliana GN=BHLH123
           PE=2 SV=1
          Length = 454

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/119 (50%), Positives = 73/119 (61%), Gaps = 6/119 (5%)

Query: 138 KAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLC 197
           +A    +S + A  +KEK+GDRI ALQQLVSPFGKTD ASVL EA+ YI+FLH QV  L 
Sbjct: 332 RAKSEAASPSPAFKRKEKMGDRIAALQQLVSPFGKTDAASVLSEAIEYIKFLHQQVSALS 391

Query: 198 SPY------LQHHQHEGGENGGEESRKDLKSKGLCLVPVACTVHVANSNGADFWAPAMG 250
           +PY      LQH Q +           DL+S+GLCLVPV+ T  V +    DFW P  G
Sbjct: 392 NPYMKSGASLQHQQSDHSTELEVSEEPDLRSRGLCLVPVSSTFPVTHDTTVDFWTPTFG 450


>sp|Q9SFZ3|BH110_ARATH Transcription factor bHLH110 OS=Arabidopsis thaliana GN=BHLH110
           PE=2 SV=2
          Length = 453

 Score =  113 bits (283), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 10/114 (8%)

Query: 131 QRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLH 190
           +  SKK +  ++ SS    K +KEKLGDRI ALQQLVSPFGKTDTASVL EA+GYI+FL 
Sbjct: 314 ENASKKPRV-ESRSSCPPFKVRKEKLGDRIAALQQLVSPFGKTDTASVLMEAIGYIKFLQ 372

Query: 191 DQVQVLCSPYLQHHQHEGG---------ENGGEESRKDLKSKGLCLVPVACTVH 235
            Q++ L  PY++  ++  G         + G EE  +DL+S+GLCLVP++C  +
Sbjct: 373 SQIETLSVPYMRASRNRPGKASQLVSQSQEGDEEETRDLRSRGLCLVPLSCMTY 426


>sp|Q9FYJ6|BH111_ARATH Transcription factor bHLH111 OS=Arabidopsis thaliana GN=BHLH111
           PE=2 SV=1
          Length = 319

 Score =  102 bits (253), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 81/128 (63%), Gaps = 9/128 (7%)

Query: 129 VSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRF 188
           +S   SKK K ++  + +   +  K KL D+IT LQQ+VSPFGKTDTASVL EA+ YI F
Sbjct: 184 ISDEVSKKAKCSEGSTLSPEKELPKAKLRDKITTLQQIVSPFGKTDTASVLQEAITYINF 243

Query: 189 LHDQVQVLCSPYLQHHQHE---GGENGGEESRK-----DLKSKGLCLVPVACTVHVANSN 240
             +QV++L +PY+++   +   GG +  + +++     DL+S+GLCLVP++ T      N
Sbjct: 244 YQEQVKLLSTPYMKNSSMKDPWGGWDREDHNKRGPKHLDLRSRGLCLVPISYTPIAYRDN 303

Query: 241 GA-DFWAP 247
            A D+W P
Sbjct: 304 SATDYWNP 311


>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
           PE=2 SV=1
          Length = 301

 Score =  100 bits (249), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 13/112 (11%)

Query: 136 KTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQV-- 193
           K    + PS     K +KEKLGDRITALQQLVSPFGKTDTASVLH+A+ YI+FL +Q+  
Sbjct: 176 KRPRLETPSHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITE 235

Query: 194 QVLCSPYL-------QHHQHEGGENGGEES----RKDLKSKGLCLVPVACTV 234
           +V  SP+L       Q    +   N         R+DL+S+GLCL+P++ T 
Sbjct: 236 KVSTSPHLNSIGSGEQKQWSDKSSNNTHNQNCSPRQDLRSRGLCLMPISSTF 287


>sp|Q9M0X8|BH114_ARATH Transcription factor bHLH114 OS=Arabidopsis thaliana GN=BHLH114
           PE=2 SV=2
          Length = 298

 Score = 92.4 bits (228), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 66/98 (67%), Gaps = 17/98 (17%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPY------LQH 203
           K +KEKLGDRITALQQLVSPFGKTDTASVL+EA+ YI+FL +QV VL +P       +Q 
Sbjct: 173 KVRKEKLGDRITALQQLVSPFGKTDTASVLNEAVEYIKFLQEQVTVLSNPEQNTIGSVQQ 232

Query: 204 HQ-------HEGGENGGEE--SRK--DLKSKGLCLVPV 230
            Q       +  GE   +E   R+  DL S+GLCL+P+
Sbjct: 233 QQCSNKKSINTQGEVEEDECSPRRYVDLSSRGLCLMPI 270


>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
           SV=1
          Length = 297

 Score = 65.9 bits (159), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 59/98 (60%), Gaps = 3/98 (3%)

Query: 101 PSKSTKKRNGSAQESVPRSNLATTTSPVVSQ--RTSKKTKAADNPSSTAHAKAKKEKLGD 158
           P +S     GS +   P+  ++TT++PVV Q  R   +   A +P S A  + ++E++ +
Sbjct: 65  PQESGGPTMGSQEGLQPQGTVSTTSAPVVRQKPRVRARRGQATDPHSIAE-RLRRERIAE 123

Query: 159 RITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           R+ +LQ+LV    KTD AS+L E + Y+RFL  QV+VL
Sbjct: 124 RMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVL 161


>sp|Q9C707|BH083_ARATH Transcription factor bHLH83 OS=Arabidopsis thaliana GN=BHLH83 PE=2
           SV=1
          Length = 298

 Score = 62.8 bits (151), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 80/148 (54%), Gaps = 11/148 (7%)

Query: 53  FGDYNKQNDGDIVVYGETTATAAATPK--SGITCSDSSSASSGNNSSANTPSKSTKKRNG 110
           F ++N Q+  DI+     +  +  TP+       SDS+  ++G+ + + +P  +  KR+ 
Sbjct: 121 FTNWNHQHHMDII-----SPRSTETPQGQKDWLYSDSTVVTTGSRNESLSPKSAGNKRSH 175

Query: 111 SAQESVPRSNLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPF 170
           + + + P   L+   S V  +   K T +  +P S A AK ++E++ +R+  LQ+LV   
Sbjct: 176 TGESTQPSKKLS---SGVTGKTKPKPTTSPKDPQSLA-AKNRRERISERLKILQELVPNG 231

Query: 171 GKTDTASVLHEAMGYIRFLHDQVQVLCS 198
            K D  ++L +A+ Y++FL  QV+VL +
Sbjct: 232 TKVDLVTMLEKAISYVKFLQVQVKVLAT 259


>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
           SV=2
          Length = 310

 Score = 53.5 bits (127), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 35/152 (23%)

Query: 122 ATTTSPVVSQRTSKKTKA----ADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTAS 177
           ATT       +T  K +A    A +P S A  + ++E++ +R+ +LQ+LV    KTD AS
Sbjct: 115 ATTGGATAQPQTKPKVRARRGQATDPHSIAE-RLRRERIAERMKSLQELVPNGNKTDKAS 173

Query: 178 VLHEAMGYIRFLHDQVQVLCSPYL-------------QHHQHEGGENGGEESRKD----- 219
           +L E + Y++FL  QV+VL    L                 HE   + GE    +     
Sbjct: 174 MLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISEDAGGSHENTSSSGEAKMTEHQVAK 233

Query: 220 ------------LKSKGLCLVPVACTVHVANS 239
                       L+ KGLCL+P++    ++ +
Sbjct: 234 LMEEDMGSAMQYLQGKGLCLMPISLATTISTA 265


>sp|Q9FJ00|BH086_ARATH Putative transcription factor bHLH086 OS=Arabidopsis thaliana
           GN=BHLH86 PE=4 SV=2
          Length = 307

 Score = 53.1 bits (126), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 135 KKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQ 194
           K T +  +P S A AK ++E++ +R+  LQ+LV    K D  ++L +A+GY++FL  QV+
Sbjct: 203 KATTSPKDPQSLA-AKNRRERISERLKVLQELVPNGTKVDLVTMLEKAIGYVKFLQVQVK 261

Query: 195 VLCS 198
           VL +
Sbjct: 262 VLAA 265


>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
           SV=1
          Length = 350

 Score = 52.0 bits (123), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)

Query: 140 ADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSP 199
           A +P S A  + ++E++ +R+ ALQ+LV    KTD AS+L E + Y++FL  QV+VL   
Sbjct: 145 ATDPHSIAE-RLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMS 203

Query: 200 YL 201
            L
Sbjct: 204 RL 205


>sp|Q8S3D2|BH087_ARATH Transcription factor bHLH87 OS=Arabidopsis thaliana GN=BHLH87 PE=2
           SV=1
          Length = 373

 Score = 51.6 bits (122), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 128 VVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIR 187
           +V +   K  K + +P + A A+ ++E++ ++I  LQ LV    K DTAS+L EA  Y++
Sbjct: 264 IVEKPKRKNVKISTDPQTVA-ARQRRERISEKIRVLQTLVPGGTKMDTASMLDEAANYLK 322

Query: 188 FLHDQVQVL 196
           FL  QV+ L
Sbjct: 323 FLRAQVKAL 331


>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
           PE=4 SV=1
          Length = 223

 Score = 50.4 bits (119), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 121 LATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLH 180
           L + TS  + ++       A +P S  +A+ ++E++ DR+  LQ LV    K D +++L 
Sbjct: 120 LVSNTSKSLKRKAKANRGIASDPQSL-YARKRRERINDRLKTLQSLVPNGTKVDISTMLE 178

Query: 181 EAMGYIRFLHDQVQVLCSPYLQHH 204
           +A+ Y++FL  Q+++L S  L  +
Sbjct: 179 DAVHYVKFLQLQIKLLSSEDLWMY 202


>sp|Q84WK0|BH085_ARATH Transcription factor bHLH85 OS=Arabidopsis thaliana GN=BHLH85 PE=2
           SV=1
          Length = 352

 Score = 49.7 bits (117), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 139 AADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCS 198
           AA +P S  +A+ ++E++ +R+  LQ LV    K D +++L EA+ Y++FL  Q+++L S
Sbjct: 272 AATDPQS-LYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSS 330

Query: 199 PYLQHH 204
             L  +
Sbjct: 331 DDLWMY 336


>sp|Q7XHI9|BH084_ARATH Transcription factor bHLH84 OS=Arabidopsis thaliana GN=BHLH84 PE=2
           SV=1
          Length = 328

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)

Query: 139 AADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCS 198
           AA +P S  +A+ ++E++ +R+  LQ LV    K D +++L EA+ Y++FL  Q+++L S
Sbjct: 243 AATDPQS-LYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSS 301

Query: 199 PYLQHH 204
             L  +
Sbjct: 302 DDLWMY 307


>sp|O81313|IND_ARATH Transcription factor IND OS=Arabidopsis thaliana GN=IND PE=1 SV=3
          Length = 198

 Score = 49.3 bits (116), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 129 VSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRF 188
           V +   +  + +D+P +   A+ ++E++ ++I  L+++V    K DTAS+L EA+ Y +F
Sbjct: 108 VPKPNRRNVRISDDPQTVV-ARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKF 166

Query: 189 LHDQVQVL 196
           L  QV++L
Sbjct: 167 LKRQVRIL 174


>sp|Q8LEG1|BH054_ARATH Transcription factor bHLH54 OS=Arabidopsis thaliana GN=BHLH54 PE=2
           SV=1
          Length = 258

 Score = 48.5 bits (114), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 3/83 (3%)

Query: 122 ATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHE 181
           A+ TS     R +K T  A +P S  +A+ ++EK+ +R+  LQ LV    K D +++L E
Sbjct: 158 ASVTSVKGKTRATKGT--ATDPQS-LYARKRREKINERLKTLQNLVPNGTKVDISTMLEE 214

Query: 182 AMGYIRFLHDQVQVLCSPYLQHH 204
           A+ Y++FL  Q+++L S  L  +
Sbjct: 215 AVHYVKFLQLQIKLLSSDDLWMY 237


>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
          Length = 478

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 5/127 (3%)

Query: 72  ATAAATPKSGITCSDSS--SASSGNNSSANTPSKSTKKRNGSAQESVPRSNLATTTSPVV 129
           A A   P   IT + SS  S S       N   +  K+R  +  +    S    T    V
Sbjct: 217 AVAMTAPAIEITGTSSSVVSKSEIEPEKTNVDDRKRKEREATTTDET-ESRSEETKQARV 275

Query: 130 SQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFL 189
           S  ++K+++AA+        + +++++ +R+ ALQ+L+    K+D AS+L EA+ Y++ L
Sbjct: 276 STTSTKRSRAAE--VHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSL 333

Query: 190 HDQVQVL 196
             Q+Q++
Sbjct: 334 QLQIQMM 340


>sp|Q9M0R0|BH081_ARATH Transcription factor bHLH81 OS=Arabidopsis thaliana GN=BHLH81 PE=2
           SV=1
          Length = 262

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 2/78 (2%)

Query: 120 NLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGK-TDTASV 178
           N+       V+ R   K   A +P S A  + ++ ++ DRI  LQ+LV    K T+TA +
Sbjct: 171 NMENLMEDSVAFRVRAKRGCATHPRSIAE-RVRRTRISDRIRKLQELVPNMDKQTNTADM 229

Query: 179 LHEAMGYIRFLHDQVQVL 196
           L EA+ Y++ L  Q+Q L
Sbjct: 230 LEEAVEYVKVLQRQIQEL 247


>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
           thaliana GN=AIB PE=2 SV=2
          Length = 566

 Score = 47.4 bits (111), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 53  FGDYNKQNDGDIVVYGETTATAAATPKSGITCSDSSSASSGNNSSANTPSKSTKK-RNGS 111
           FG Y  Q D   V+            K+ I  + SS A+S N      PS +T++ ++ S
Sbjct: 303 FG-YTPQRDDVKVLENVNMVVDNNNYKTQIEFAGSSVAASSN------PSTNTQQEKSES 355

Query: 112 AQESVPRSNLAT--TTSPVVSQRTSKKTKAADN----PSSTAHA-KAKKEKLGDRITALQ 164
             E  P S LA     S V  +R  K+ +   N    P +   A + ++EKL  R  AL+
Sbjct: 356 CTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALR 415

Query: 165 QLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
            +V    K D AS+L +A+ YI+ L ++V+++
Sbjct: 416 SVVPNISKMDKASLLGDAISYIKELQEKVKIM 447


>sp|Q9C8P8|BH080_ARATH Transcription factor bHLH80 OS=Arabidopsis thaliana GN=BHLH80 PE=1
           SV=1
          Length = 259

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 2/66 (3%)

Query: 132 RTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGK-TDTASVLHEAMGYIRFLH 190
           R   K   A +P S A  + ++ ++ DRI  LQ+LV    K T+TA +L EA+ Y++ L 
Sbjct: 180 RVRAKRGCATHPRSIAE-RVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQ 238

Query: 191 DQVQVL 196
            Q+Q L
Sbjct: 239 SQIQEL 244


>sp|Q9M041|BH140_ARATH Transcription factor bHLH140 OS=Arabidopsis thaliana GN=BHLH140
           PE=4 SV=1
          Length = 912

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)

Query: 130 SQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFL 189
           ++R+   +  + +P S A A+ ++ ++ DR   LQ +V    K DT S+L EA+ Y++FL
Sbjct: 34  TKRSRSTSTLSTDPQSVA-ARDRRHRISDRFKILQSMVPGGAKMDTVSMLDEAISYVKFL 92

Query: 190 HDQVQVLCSPYLQHHQHE 207
             Q+    +  L  + HE
Sbjct: 93  KAQIWYHQNMLLFINDHE 110


>sp|Q7XAQ6|LAX_ORYSJ Transcription factor LAX PANICLE OS=Oryza sativa subsp. japonica
           GN=LAX PE=1 SV=1
          Length = 215

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 138 KAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLC 197
           K + +P S A A+ ++ ++ DR   L+ LV    K DT S+L +A+ Y++FL  QV +  
Sbjct: 39  KLSTDPQSVA-ARERRHRISDRFRVLRSLVPGGSKMDTVSMLEQAIHYVKFLKAQVTLHQ 97

Query: 198 SPYLQH 203
           +  +QH
Sbjct: 98  AALVQH 103


>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
          Length = 210

 Score = 44.3 bits (103), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 32/48 (66%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLC 197
           K ++ K+ +++ ALQ+L+    KTD AS+L EA+ Y++ L  QVQ L 
Sbjct: 103 KKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTLA 150


>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
          Length = 524

 Score = 43.5 bits (101), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 41/63 (65%), Gaps = 2/63 (3%)

Query: 134 SKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQV 193
           SK++++A+        + +++++ +++ ALQ+L+    K D AS+L EA+ Y++ L  QV
Sbjct: 339 SKRSRSAE--VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQV 396

Query: 194 QVL 196
           Q++
Sbjct: 397 QIM 399


>sp|Q8W2F3|PIF4_ARATH Transcription factor PIF4 OS=Arabidopsis thaliana GN=PIF4 PE=1 SV=1
          Length = 430

 Score = 42.4 bits (98), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 29/41 (70%)

Query: 156 LGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           + +R+ ALQ+L+    KTD AS+L EA+ Y++ L  Q+QV+
Sbjct: 273 INERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313


>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
           SV=1
          Length = 373

 Score = 42.0 bits (97), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           K ++ ++ +++ ALQ L+    KTD AS+L EA+ Y++ L  QVQ+L
Sbjct: 207 KRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253


>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
           GN=AMS PE=1 SV=2
          Length = 571

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 37/62 (59%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQHHQHEGG 209
           + +++KL DR+ AL+ LV    K D AS+L +A+ Y++ L ++ + L     ++ + E G
Sbjct: 320 RRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETEDG 379

Query: 210 EN 211
            N
Sbjct: 380 SN 381


>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
           SV=1
          Length = 423

 Score = 42.0 bits (97), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 13/102 (12%)

Query: 101 PSKSTKKRNGSAQ---ESVPRSNLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKK---E 154
           P+ S   ++G+ Q   E   R  L TT       R +  TK   +P+  +H +A+K   E
Sbjct: 207 PAVSDHSKSGNQQFGSERKRRRKLETT-------RVAAATKEKHHPAVLSHVEAEKQRRE 259

Query: 155 KLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           KL  R  AL+ +V    + D AS+L +A+ YI  L  ++  L
Sbjct: 260 KLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDL 301


>sp|Q84LH8|PIF5_ARATH Transcription factor PIF5 OS=Arabidopsis thaliana GN=PIF5 PE=1 SV=1
          Length = 444

 Score = 41.6 bits (96), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 57/93 (61%), Gaps = 10/93 (10%)

Query: 113 QESVPRSNLATTTSP------VVSQRT--SKKTKAADNPSSTAHAKAKKEKLGDRITALQ 164
           QESV +S++  T++         SQR+  +++++AA+        + +++++ +R+ ALQ
Sbjct: 223 QESVSQSDIGLTSTDDQTMGNKSSQRSGSTRRSRAAE--VHNLSERRRRDRINERMKALQ 280

Query: 165 QLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLC 197
           +L+    +TD AS+L EA+ Y++ L  Q+QV+ 
Sbjct: 281 ELIPHCSRTDKASILDEAIDYLKSLQMQLQVMW 313


>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
           GN=BHLH56 PE=4 SV=2
          Length = 445

 Score = 41.6 bits (96), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 16/52 (30%), Positives = 32/52 (61%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYL 201
           + ++EK+ +++  LQQL+    K+   S L +A+ Y++ L  Q+Q + SP +
Sbjct: 265 RRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMM 316


>sp|Q9LXD8|HEC3_ARATH Transcription factor HEC3 OS=Arabidopsis thaliana GN=HEC3 PE=1 SV=1
          Length = 224

 Score = 41.6 bits (96), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/68 (38%), Positives = 45/68 (66%), Gaps = 1/68 (1%)

Query: 129 VSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRF 188
           V +   +  + +D+P S A A+ ++E++ +RI  LQ+LV    K DTAS+L EA+ Y++F
Sbjct: 115 VKKPKRRNVRISDDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKF 173

Query: 189 LHDQVQVL 196
           L  Q+++L
Sbjct: 174 LKRQIRLL 181


>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
           SV=1
          Length = 590

 Score = 40.8 bits (94), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           + ++EKL  R  AL+ +V    K D AS+L +A+ YI  LH +++V+
Sbjct: 439 RQRREKLNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVM 485


>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
           SV=1
          Length = 399

 Score = 40.4 bits (93), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           + +++K+  R+  LQ+LV    KTD AS+L E + Y++ L  QV ++
Sbjct: 223 RKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269


>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
          Length = 416

 Score = 40.4 bits (93), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 122 ATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHE 181
           A T  PV  ++ S +           + + ++++   ++ ALQ L+    K D AS+L E
Sbjct: 218 ARTRKPVTKRKRSTEVHKL-------YERKRRDEFNKKMRALQDLLPNCYKDDKASLLDE 270

Query: 182 AMGYIRFLHDQVQVL 196
           A+ Y+R L  QVQ++
Sbjct: 271 AIKYMRTLQLQVQMM 285


>sp|Q93Y00|BH007_ARATH Transcription factor bHLH7 OS=Arabidopsis thaliana GN=BHLH7 PE=2
           SV=1
          Length = 302

 Score = 39.7 bits (91), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 40/167 (23%)

Query: 112 AQESVPRSNLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFG 171
           +Q + P  +  +T  P V  R  + T    +P S A  + ++E++ +RI +LQ+LV    
Sbjct: 127 SQPAPPMPHQQSTIRPRVRARRGQAT----DPHSIAE-RLRRERIAERIRSLQELVPTVN 181

Query: 172 KTDTASVLHEAMGYIRFLHDQVQVL----------CSPYLQHHQ------------HEGG 209
           KTD A+++ E + Y++FL  QV+VL           +P +                 E  
Sbjct: 182 KTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTEMPLSSSVEDETQAVWEKW 241

Query: 210 ENGGEESR-------------KDLKSKGLCLVPVACTVHVANSNGAD 243
            N G E +             + L+SK LC++P++  + + +S   D
Sbjct: 242 SNDGTERQVAKLMEENVGAAMQLLQSKALCIMPISLAMAIYHSQPPD 288


>sp|Q9FE22|HFR1_ARATH Transcription factor HFR1 OS=Arabidopsis thaliana GN=HFR1 PE=1 SV=1
          Length = 292

 Score = 39.3 bits (90), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 17/100 (17%)

Query: 106 KKRNGSAQESVPRSNLATTTSPVVSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQ 165
           KKR      S   S   T   P V+++ SK+ +             + EK+ +++  LQQ
Sbjct: 113 KKRRIQVLSSDDESEEFTREVPSVTRKGSKRRR-------------RDEKMSNKMRKLQQ 159

Query: 166 LVSPFGKTDTASVLHEAMGYIRFLHDQVQVL----CSPYL 201
           LV    KTD  SVL + + Y++ L  Q+Q++     +PY 
Sbjct: 160 LVPNCHKTDKVSVLDKTIEYMKNLQLQLQMMSTVGVNPYF 199


>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
           SV=2
          Length = 328

 Score = 39.3 bits (90), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 18/44 (40%), Positives = 28/44 (63%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQV 193
           + ++EKL  R  AL  LV    K D ASVL +A+ +I++L ++V
Sbjct: 158 RKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERV 201


>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
           SV=1
          Length = 596

 Score = 38.9 bits (89), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 135 KKTKAADNPSSTA-HA---KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLH 190
           K+    D P  T  HA   K ++EKL +R   L+ ++    K D  S+L + + Y++ L 
Sbjct: 392 KEELLPDTPEETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQ 451

Query: 191 DQVQVL 196
            +VQ L
Sbjct: 452 KRVQEL 457


>sp|Q9LRJ4|BH117_ARATH Transcription factor bHLH117 OS=Arabidopsis thaliana GN=BHLH117
           PE=2 SV=2
          Length = 252

 Score = 38.9 bits (89), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 152 KKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQHHQHEGGEN 211
           K+ K+ D+I +L++L+    K + A  L E+  YI+FL  Q+  L    L+   +  GE 
Sbjct: 142 KRRKISDKIRSLEKLMPWERKMNLAMTLEESHKYIKFLQSQIASLRWMPLESVYNTAGEV 201

Query: 212 GGEESRKDLKSKGLCLVPVACTVHVANSNGA 242
           G  +  K L  + +  V       +ANS G+
Sbjct: 202 GETDLLKSLTRQQILQV-------LANSPGS 225


>sp|Q9SND4|HEC2_ARATH Transcription factor HEC2 OS=Arabidopsis thaliana GN=HEC2 PE=1 SV=1
          Length = 231

 Score = 38.9 bits (89), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 135 KKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQ 194
           K  + + +P S A A+ ++E++ +RI  LQ+LV    K DTAS+L EA+ Y++FL  QVQ
Sbjct: 121 KNVRISKDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 179

Query: 195 VL 196
            L
Sbjct: 180 SL 181


>sp|Q9FHA7|HEC1_ARATH Transcription factor HEC1 OS=Arabidopsis thaliana GN=HEC1 PE=1 SV=1
          Length = 241

 Score = 38.5 bits (88), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)

Query: 135 KKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQ 194
           +  + + +P S A A+ ++E++ +RI  LQ+LV    K DTAS+L EA+ Y++FL  QVQ
Sbjct: 124 RNVRISKDPQSVA-ARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQ 182

Query: 195 VL 196
            L
Sbjct: 183 SL 184


>sp|O22768|UNE12_ARATH Transcription factor UNE12 OS=Arabidopsis thaliana GN=UNE12 PE=2
           SV=2
          Length = 310

 Score = 38.1 bits (87), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 43/157 (27%)

Query: 129 VSQRTSKKTKAADNPSSTAHAKAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRF 188
           +  R   +   A +P S A  + ++E++ +RI ALQ+LV    KTD A+++ E + Y++F
Sbjct: 142 IRPRVRARRGQATDPHSIAE-RLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKF 200

Query: 189 LHDQVQVL-------------------CSPYLQHHQHEGGE----------NGGEESR-- 217
           L  QV+VL                    S  ++    EGG           N G E +  
Sbjct: 201 LRLQVKVLSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVA 260

Query: 218 -----------KDLKSKGLCLVPVACTVHVANSNGAD 243
                      + L+SK LC++P++  + + +S   D
Sbjct: 261 KLMEENVGAAMQLLQSKALCMMPISLAMAIYHSQPPD 297


>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
           SV=1
          Length = 305

 Score = 38.1 bits (87), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 27/44 (61%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQV 193
           + ++EKL  R  AL  L+    K D ASVL +A+ +I++L + V
Sbjct: 132 RKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESV 175


>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
           SV=1
          Length = 637

 Score = 38.1 bits (87), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           K ++EKL +R   L++++    K D  S+L + + Y++ L  +VQ L
Sbjct: 447 KKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQEL 493


>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
           SV=1
          Length = 263

 Score = 37.7 bits (86), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 20/61 (32%), Positives = 38/61 (62%), Gaps = 3/61 (4%)

Query: 139 AADNPSSTAHA---KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQV 195
           AA +P+S+ +    + +++KL  R+ AL+ +V    K D ASV+ +++ Y++ L DQ + 
Sbjct: 46  AATSPASSKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKT 105

Query: 196 L 196
           L
Sbjct: 106 L 106


>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
          Length = 320

 Score = 37.7 bits (86), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 32/47 (68%)

Query: 150 KAKKEKLGDRITALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVL 196
           + +++KL +R+ AL  L+    KTD A+VL +A+ +++ L ++V+ L
Sbjct: 138 RKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKL 184


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.123    0.350 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,812,316
Number of Sequences: 539616
Number of extensions: 4245710
Number of successful extensions: 20472
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 337
Number of HSP's that attempted gapping in prelim test: 17132
Number of HSP's gapped (non-prelim): 3069
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)