Query 036197
Match_columns 103
No_of_seqs 116 out of 501
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 17:43:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n89_A Lipid transfer protein; 99.9 4.7E-23 1.6E-27 127.8 1.3 67 37-103 1-67 (67)
2 1l6h_A LTP2, non-specific lipi 99.8 4.1E-23 1.4E-27 128.7 -1.3 68 36-103 1-68 (69)
3 2rkn_A DIR1 protein, AT5G48485 99.7 7E-19 2.4E-23 111.1 1.2 69 35-103 2-77 (77)
4 2ljo_A Non-specific lipid-tran 99.6 1.8E-16 6.2E-21 103.8 -0.6 67 35-101 1-79 (93)
5 2alg_A Non-specific lipid tran 99.6 1.5E-16 5.2E-21 103.6 -1.2 65 36-101 2-79 (92)
6 1bwo_A NS-LTP1, nonspecific li 99.5 1.2E-15 4E-20 99.1 -1.0 64 36-101 1-78 (90)
7 1siy_A LTP 1, NS-LTP1, nonspec 99.5 2.7E-15 9.2E-20 97.5 0.7 63 36-101 1-78 (91)
8 1afh_A Maize nonspecific lipid 99.4 1.3E-14 4.4E-19 94.6 -0.2 63 36-101 2-80 (93)
9 1t12_A LTP 1, nonspecific lipi 99.4 1.1E-14 3.8E-19 94.7 -0.9 62 36-101 2-78 (91)
10 1hyp_A Hydrophobic protein fro 94.0 0.022 7.4E-07 36.0 1.6 62 36-102 6-73 (80)
11 3ob4_A Conglutin, maltose ABC 84.7 0.045 1.5E-06 43.0 -3.5 46 58-103 429-488 (500)
12 1s6d_A Albumin 8; all helix, f 82.8 0.9 3.1E-05 29.3 2.7 61 43-103 21-101 (103)
13 2ds2_B Sweet protein mabinlin- 79.9 0.24 8.4E-06 30.2 -0.7 46 58-103 8-67 (72)
14 1w2q_A Conglutin, ARA H 6; all 70.2 1.1 3.8E-05 30.0 0.5 58 42-99 24-112 (127)
15 1pnb_B Napin BNIB; napin IA an 69.7 0.27 9.2E-06 30.1 -2.5 48 56-103 10-70 (75)
16 1psy_A 2S albumin, RICC3; albu 64.0 0.92 3.2E-05 30.3 -0.9 57 42-98 26-116 (125)
17 1sm7_A Recombinant IB pronapin 63.5 0.79 2.7E-05 29.6 -1.3 61 43-103 15-104 (109)
18 2lvf_A 2S albumin; allergen, c 38.2 13 0.00046 24.1 1.5 61 43-103 18-105 (114)
19 1b1u_A Protein (alpha-amylase/ 35.4 5.7 0.00019 26.4 -0.7 60 43-102 17-109 (122)
20 1bea_A Bifunctional amylase/se 35.3 10 0.00036 25.3 0.6 59 43-101 17-109 (127)
No 1
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=99.86 E-value=4.7e-23 Score=127.79 Aligned_cols=67 Identities=42% Similarity=0.920 Sum_probs=63.0
Q ss_pred ccCcccccCChhhhcCCCCCChhhHHhhhhcCccccccccCcCccCCCChHHHHHhhcccCCCCCCC
Q 036197 37 TCNPSQLTPCLPAFTWTAPPSTVCCNSLRQQRPCLCTYLRNPLYKQYYDSPNYRRIAVTCGVPFPRC 103 (103)
Q Consensus 37 ~C~~~~L~pC~~yv~~~~~Ps~~CC~~lk~~~~ClC~~lk~~~~~~~i~~~~a~~lp~~Cgv~~p~C 103 (103)
+|+..+|.||++|++++.+||++||++||++..|+|+|+|++++..+||.++|++||++||+++|+|
T Consensus 1 ~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 67 (67)
T 1n89_A 1 ACQASQLAVCASAILSGAKPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67 (67)
T ss_dssp CCCSSTTHHHHHHHTTCCCCCHHHHHHHHHHSSHHHHGGGCSTTHHHHTCHHHHHHHHHHTSCCSCC
T ss_pred CCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 4888889999999999889999999999999999999999988876899999999999999999998
No 2
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=99.84 E-value=4.1e-23 Score=128.72 Aligned_cols=68 Identities=41% Similarity=0.959 Sum_probs=63.7
Q ss_pred cccCcccccCChhhhcCCCCCChhhHHhhhhcCccccccccCcCccCCCChHHHHHhhcccCCCCCCC
Q 036197 36 VTCNPSQLTPCLPAFTWTAPPSTVCCNSLRQQRPCLCTYLRNPLYKQYYDSPNYRRIAVTCGVPFPRC 103 (103)
Q Consensus 36 ~~C~~~~L~pC~~yv~~~~~Ps~~CC~~lk~~~~ClC~~lk~~~~~~~i~~~~a~~lp~~Cgv~~p~C 103 (103)
++|+..+|.||++|++++.+||++||++||++..|+|+|+|++++..+||.++|++||++||+++|+|
T Consensus 1 ~~C~~~~L~pC~~~v~~~~~Ps~~CC~~lk~~~~ClC~~~k~~~~~~~in~~~A~~Lp~~Cgv~~P~C 68 (69)
T 1l6h_A 1 AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 68 (69)
T ss_dssp CCSTTTTHHHHHHHHTTCCSTTHHHHHHHHHHHHHHHHHTTCSSHHHHTTTTTGGGCCCCCSSCSCCC
T ss_pred CCCChhhcccCHHHHcCCCCCCHHHHHhhCCCCCCCCccccCcccccccCHHHHHHHHHHcCCCCCCC
Confidence 36998899999999999889999999999999999999999988877899999999999999999998
No 3
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=99.72 E-value=7e-19 Score=111.14 Aligned_cols=69 Identities=29% Similarity=0.683 Sum_probs=58.7
Q ss_pred CcccCcc--cccCChhhhcCC--CCCChhhHHhhhhcC-ccccccccCcCccCC-CChHHHHHhhcccCCCCC-CC
Q 036197 35 AVTCNPS--QLTPCLPAFTWT--APPSTVCCNSLRQQR-PCLCTYLRNPLYKQY-YDSPNYRRIAVTCGVPFP-RC 103 (103)
Q Consensus 35 ~~~C~~~--~L~pC~~yv~~~--~~Ps~~CC~~lk~~~-~ClC~~lk~~~~~~~-i~~~~a~~lp~~Cgv~~p-~C 103 (103)
..+|+.+ +|.||++|++++ .+||++||++||+.+ .|+|.|++++.+..+ ||+++|++||++||+++| +|
T Consensus 2 ~~~C~~~~~~L~pC~~yv~~~~~~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~gin~~~A~~LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 2 IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 77 (77)
T ss_dssp CCBTTBCHHHHHHHGGGGBSSSCCCCCHHHHHHHTTCCHHHHHTTTTCHHHHHHTBCHHHHHHHHHHTTCSCCCCC
T ss_pred cchHHhHHHhHhhCHHHHcCCCCCCCCHHHHHHHHhcCcCCcCcccCCcchhhcCcCHHHHHHHHHHcCCCCCCCC
Confidence 3579876 489999999985 589999999999744 999999987655544 999999999999999998 77
No 4
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=99.56 E-value=1.8e-16 Score=103.75 Aligned_cols=67 Identities=28% Similarity=0.652 Sum_probs=56.1
Q ss_pred CcccCcc--cccCChhhhcCCCCCChhhHHhhhh---------cCccccccccCcC-ccCCCChHHHHHhhcccCCCCC
Q 036197 35 AVTCNPS--QLTPCLPAFTWTAPPSTVCCNSLRQ---------QRPCLCTYLRNPL-YKQYYDSPNYRRIAVTCGVPFP 101 (103)
Q Consensus 35 ~~~C~~~--~L~pC~~yv~~~~~Ps~~CC~~lk~---------~~~ClC~~lk~~~-~~~~i~~~~a~~lp~~Cgv~~p 101 (103)
+++|.++ .|.||++|++++..|++.||+++|+ ++.|+|+++|+.. ....||.++|..||++||+++|
T Consensus 1 AisC~~v~~~L~pCl~Yv~g~~~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~~in~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 1 AISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CCSSHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCTTCCHHHHHHHHHHHTCCCS
T ss_pred CCCHHHHHHHHHhHHHHHcCCCCCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccCCcCHHHHHhhhHhcCCCCC
Confidence 4789877 4899999999988899999999997 1269999998732 2236999999999999999887
No 5
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=99.56 E-value=1.5e-16 Score=103.59 Aligned_cols=65 Identities=26% Similarity=0.597 Sum_probs=55.5
Q ss_pred cccCcc--cccCChhhhcCCCCCChhhHHhhhh---------c--CccccccccCcCccCCCChHHHHHhhcccCCCCC
Q 036197 36 VTCNPS--QLTPCLPAFTWTAPPSTVCCNSLRQ---------Q--RPCLCTYLRNPLYKQYYDSPNYRRIAVTCGVPFP 101 (103)
Q Consensus 36 ~~C~~~--~L~pC~~yv~~~~~Ps~~CC~~lk~---------~--~~ClC~~lk~~~~~~~i~~~~a~~lp~~Cgv~~p 101 (103)
++|+++ .|.||++|++++.+|+++||++||+ + ..|+|.+...+.+. +||.++|+.||++||+++|
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~~~~~~~~-~in~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 2 ITCGQVSSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVP-GVNPNNAAALPGKCGVSIP 79 (92)
T ss_dssp CCHHHHHHHHGGGHHHHHHCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHST-TCCHHHHHHHHHHTTCCCS
T ss_pred CChHHHHHhccCcHHHHcCCCCCCHHHHHHHHHHHhhhcccCCCCcCCccccCcccccC-ccChHHHHHHHHHcCCCCC
Confidence 578877 5899999999888899999999998 3 37999765545665 8999999999999999976
No 6
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=99.49 E-value=1.2e-15 Score=99.06 Aligned_cols=64 Identities=30% Similarity=0.675 Sum_probs=51.9
Q ss_pred cccCcc--cccCChhhhcCCCCCChhhHHhhhh-----------cCccccccccCcCcc-CCCChHHHHHhhcccCCCCC
Q 036197 36 VTCNPS--QLTPCLPAFTWTAPPSTVCCNSLRQ-----------QRPCLCTYLRNPLYK-QYYDSPNYRRIAVTCGVPFP 101 (103)
Q Consensus 36 ~~C~~~--~L~pC~~yv~~~~~Ps~~CC~~lk~-----------~~~ClC~~lk~~~~~-~~i~~~~a~~lp~~Cgv~~p 101 (103)
++|.++ .|.||++|++++.+|+++||++||+ +..|+| +|+.... .+||.++|+.||++||+++|
T Consensus 1 i~C~~v~~~L~pCl~y~~~~~~Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~~~in~~~A~~LP~~C~v~~p 78 (90)
T 1bwo_A 1 IDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGIHNLNEDNARSIPPKCGVNLP 78 (90)
T ss_dssp CCHHHHHHHHGGGHHHHTTCSCCCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTCTTCCHHHHHTHHHHHTCCCS
T ss_pred CCHHHHHHhhcccHHHHcCCCCCCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhccCCcCHHHHHHHHHHcCCCCC
Confidence 357766 4899999999887799999999997 237999 6653222 27999999999999999876
No 7
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=99.49 E-value=2.7e-15 Score=97.48 Aligned_cols=63 Identities=22% Similarity=0.553 Sum_probs=51.7
Q ss_pred cccCcc--cccCChhhhcCCCCCChhhHHhhhhc-----------CccccccccCc--CccCCCChHHHHHhhcccCCCC
Q 036197 36 VTCNPS--QLTPCLPAFTWTAPPSTVCCNSLRQQ-----------RPCLCTYLRNP--LYKQYYDSPNYRRIAVTCGVPF 100 (103)
Q Consensus 36 ~~C~~~--~L~pC~~yv~~~~~Ps~~CC~~lk~~-----------~~ClC~~lk~~--~~~~~i~~~~a~~lp~~Cgv~~ 100 (103)
++|..+ .|.||++|++++.+||++||++||+. ..|+| +|+. .+. +||.++|+.||++||+++
T Consensus 1 i~C~~v~~~L~pCl~yv~~~~~Ps~~CC~~lk~l~~~a~t~~d~~~~ClC--~k~~~~~~~-~in~~~A~~LP~~Cgv~~ 77 (91)
T 1siy_A 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSC--LKAAAGAVR-GINPNNAEALPGKCGVNI 77 (91)
T ss_dssp CCTTTTHHHHHHHHHHHTSCSCCCHHHHHHHHHHHTTTCSSHHHHHHHHH--HHHHTTCCS-SCCHHHHHHHHHHHTCCC
T ss_pred CCHHHHHHhccCcHHHHhCCCCCcHHHHHHHHHHHhhhccCCCCCcCCcc--cCCcccccC-CcCHHHHHHHHHHcCCCC
Confidence 468877 48999999998878999999999982 26888 5653 232 599999999999999987
Q ss_pred C
Q 036197 101 P 101 (103)
Q Consensus 101 p 101 (103)
|
T Consensus 78 p 78 (91)
T 1siy_A 78 P 78 (91)
T ss_dssp S
T ss_pred C
Confidence 6
No 8
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=99.42 E-value=1.3e-14 Score=94.56 Aligned_cols=63 Identities=29% Similarity=0.662 Sum_probs=51.4
Q ss_pred cccCcc--cccCChhhhcCCC-CCChhhHHhhhhc-----------CccccccccC--cCccCCCChHHHHHhhcccCCC
Q 036197 36 VTCNPS--QLTPCLPAFTWTA-PPSTVCCNSLRQQ-----------RPCLCTYLRN--PLYKQYYDSPNYRRIAVTCGVP 99 (103)
Q Consensus 36 ~~C~~~--~L~pC~~yv~~~~-~Ps~~CC~~lk~~-----------~~ClC~~lk~--~~~~~~i~~~~a~~lp~~Cgv~ 99 (103)
++|..+ .|.||++|++++. +|+++||++||+. ..|+| ++. ..+. +||.++|..||++||++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~~~~-~in~~~A~~LP~~C~v~ 78 (93)
T 1afh_A 2 ISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGVS-GLNAGNAASIPSKCGVS 78 (93)
T ss_dssp CSSHHHHHHHGGGHHHHTTSCCSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHTTST-TCCHHHHHHHHHHHHCC
T ss_pred CChHHHHHhccCcHHHHcCCCCCChHHHHHHHHHHHHhhcCCCCCcccCEe--ecccccccc-CcCHHHHHHHHHHcCCC
Confidence 678876 4899999999876 5888999999974 26888 554 3444 79999999999999998
Q ss_pred CC
Q 036197 100 FP 101 (103)
Q Consensus 100 ~p 101 (103)
+|
T Consensus 79 ~p 80 (93)
T 1afh_A 79 IP 80 (93)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 9
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=99.41 E-value=1.1e-14 Score=94.69 Aligned_cols=62 Identities=31% Similarity=0.682 Sum_probs=50.8
Q ss_pred cccCcc--cccCChhhhcCCCCCChhhHHhhhh-----------cCccccccccC--cCccCCCChHHHHHhhcccCCCC
Q 036197 36 VTCNPS--QLTPCLPAFTWTAPPSTVCCNSLRQ-----------QRPCLCTYLRN--PLYKQYYDSPNYRRIAVTCGVPF 100 (103)
Q Consensus 36 ~~C~~~--~L~pC~~yv~~~~~Ps~~CC~~lk~-----------~~~ClC~~lk~--~~~~~~i~~~~a~~lp~~Cgv~~ 100 (103)
++|.++ .|.||++|++++.+|+ +||++||+ +..|+| +|+ ..+. +||.++|..||++||+++
T Consensus 2 ~~C~~v~~~L~pCl~y~~~~~~P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~~-~in~~~A~~LP~~C~v~~ 77 (91)
T 1t12_A 2 ITCGQVTSNLAPCLAYLRNTGPLG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAIS-GINLGKAAGLPSTCGVNI 77 (91)
T ss_dssp CCHHHHHHHTHHHHHHHTTSSCCT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHCT-TCCHHHHHHHHHHTTCCC
T ss_pred CChHHHHHhccCcHHHHcCCCChH-HHHHHHHHHHhhccCCCCCCccCCC--ccccccccC-CcChhHHHHHHHHcCCCC
Confidence 578876 4999999999876677 99999997 237888 665 2343 799999999999999987
Q ss_pred C
Q 036197 101 P 101 (103)
Q Consensus 101 p 101 (103)
|
T Consensus 78 p 78 (91)
T 1t12_A 78 P 78 (91)
T ss_dssp S
T ss_pred C
Confidence 6
No 10
>1hyp_A Hydrophobic protein from soybean; hydrophobic SEED protein; 1.80A {Glycine max} SCOP: a.52.1.1
Probab=94.01 E-value=0.022 Score=35.97 Aligned_cols=62 Identities=24% Similarity=0.508 Sum_probs=44.5
Q ss_pred cccCcccccCChhhhcCCCCCChhhHHhhhh-----cCccccccccCcCccCCCChHHHHH-hhcccCCCCCC
Q 036197 36 VTCNPSQLTPCLPAFTWTAPPSTVCCNSLRQ-----QRPCLCTYLRNPLYKQYYDSPNYRR-IAVTCGVPFPR 102 (103)
Q Consensus 36 ~~C~~~~L~pC~~yv~~~~~Ps~~CC~~lk~-----~~~ClC~~lk~~~~~~~i~~~~a~~-lp~~Cgv~~p~ 102 (103)
.+|- +|..|..-+.+...|...||.-++. ...|+|.-+| .+.. +|.+-+.. +...||..+|+
T Consensus 6 ~~CP--kLgvCanvL~g~~~~~~~CC~Ll~GL~dleAAvCLCtaik--~Lgi-lnlpv~L~llln~Cgk~~P~ 73 (80)
T 1hyp_A 6 PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLR--ALGI-LNLNRNLQLILNSCGRSYPS 73 (80)
T ss_dssp CCSC--CCGGGGGGGGTCCTTHHHHHHHHHTSCHHHHHHHHHHHHH--HHTC-SCHHHHHHHHHHHTTCSSCC
T ss_pred CCCC--chhHHHHHhCcCCCCCCccchhhhCcchhhhhhhhhhhcc--ccce-eecChhHHHHHHHhCCcCcC
Confidence 3576 7888998875433466789999997 2389998887 2343 57765555 56789999884
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=84.72 E-value=0.045 Score=43.04 Aligned_cols=46 Identities=30% Similarity=0.712 Sum_probs=32.0
Q ss_pred hhhHHhhhhcC---ccccccccCc---Ccc------CCCC-hHHHHHhhcccCCCCC-CC
Q 036197 58 TVCCNSLRQQR---PCLCTYLRNP---LYK------QYYD-SPNYRRIAVTCGVPFP-RC 103 (103)
Q Consensus 58 ~~CC~~lk~~~---~ClC~~lk~~---~~~------~~i~-~~~a~~lp~~Cgv~~p-~C 103 (103)
.+||+-|+.-+ .|.|+-|+.. ... +.-- ..+|+.||..||+..| .|
T Consensus 429 ~~cc~~l~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~c 488 (500)
T 3ob4_A 429 ERCCNELNEFENNQRCMCEALQQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQRC 488 (500)
T ss_dssp HHHHHHHGGGTTCHHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSCC
T ss_pred HHHHHHHHhCCcccccccHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCccC
Confidence 67999999863 8999888751 110 0001 2349999999999976 46
No 12
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=82.81 E-value=0.9 Score=29.34 Aligned_cols=61 Identities=16% Similarity=0.350 Sum_probs=42.2
Q ss_pred ccCChhhhcCC---C----------CCChhhHHhhhhcC-ccccccccCcC---ccC-CC--ChHHHHHhhcccCCCCCC
Q 036197 43 LTPCLPAFTWT---A----------PPSTVCCNSLRQQR-PCLCTYLRNPL---YKQ-YY--DSPNYRRIAVTCGVPFPR 102 (103)
Q Consensus 43 L~pC~~yv~~~---~----------~Ps~~CC~~lk~~~-~ClC~~lk~~~---~~~-~i--~~~~a~~lp~~Cgv~~p~ 102 (103)
|.+|..||... . ..-..||+-|+..+ .|.|+.|+... +.. .+ ....|..||..||++...
T Consensus 21 L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~Q~q~~g~q~~~~~q~A~~LP~~C~i~p~~ 100 (103)
T 1s6d_A 21 LNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP 100 (103)
T ss_dssp TTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHTTSTTCSSTHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHHHHHhcchhHHHHHHHHHhcHHhcCCCccc
Confidence 88999999531 1 12467999999876 89999986421 110 11 234689999999997544
Q ss_pred C
Q 036197 103 C 103 (103)
Q Consensus 103 C 103 (103)
|
T Consensus 101 C 101 (103)
T 1s6d_A 101 C 101 (103)
T ss_dssp S
T ss_pred C
Confidence 5
No 13
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=79.94 E-value=0.24 Score=30.18 Aligned_cols=46 Identities=33% Similarity=0.699 Sum_probs=32.6
Q ss_pred hhhHHhhhhcC-ccccccccCcC---------ccC---CCChHHHHHhhcccCCC-CCCC
Q 036197 58 TVCCNSLRQQR-PCLCTYLRNPL---------YKQ---YYDSPNYRRIAVTCGVP-FPRC 103 (103)
Q Consensus 58 ~~CC~~lk~~~-~ClC~~lk~~~---------~~~---~i~~~~a~~lp~~Cgv~-~p~C 103 (103)
..||+-|+..+ .|.|+.|+... +.. .-...+|..||..||++ ...|
T Consensus 8 qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C 67 (72)
T 2ds2_B 8 RQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGAC 67 (72)
T ss_dssp HHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCC
T ss_pred HHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcC
Confidence 56999999876 89999987522 110 01245699999999998 3445
No 14
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=70.22 E-value=1.1 Score=30.04 Aligned_cols=58 Identities=17% Similarity=0.464 Sum_probs=39.7
Q ss_pred cccCChhhhcCC------CC-C-----------ChhhHHhhhhc--C-ccccccccCcC------cc-CCCC---hHHHH
Q 036197 42 QLTPCLPAFTWT------AP-P-----------STVCCNSLRQQ--R-PCLCTYLRNPL------YK-QYYD---SPNYR 90 (103)
Q Consensus 42 ~L~pC~~yv~~~------~~-P-----------s~~CC~~lk~~--~-~ClC~~lk~~~------~~-~~i~---~~~a~ 90 (103)
.|.+|..||.-. .+ + -..||+-|+.. + .|.|+.|+... +. .... ...|.
T Consensus 24 qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~qq~q~~gqq~~~~~~q~A~ 103 (127)
T 1w2q_A 24 NLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELM 103 (127)
T ss_dssp CCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHSCTTTTTSTTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 489999999531 01 1 25699999987 5 89999987522 11 1122 34599
Q ss_pred HhhcccCCC
Q 036197 91 RIAVTCGVP 99 (103)
Q Consensus 91 ~lp~~Cgv~ 99 (103)
.||..||++
T Consensus 104 ~LP~~C~i~ 112 (127)
T 1w2q_A 104 SLPQQCNFR 112 (127)
T ss_dssp HHHHHHTCC
T ss_pred HhHHhcCCC
Confidence 999999994
No 15
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=69.69 E-value=0.27 Score=30.09 Aligned_cols=48 Identities=21% Similarity=0.485 Sum_probs=33.0
Q ss_pred CChhhHHhhhhcC-ccccccccCcC--------ccCC---CChHHHHHhhcccCCCC-CCC
Q 036197 56 PSTVCCNSLRQQR-PCLCTYLRNPL--------YKQY---YDSPNYRRIAVTCGVPF-PRC 103 (103)
Q Consensus 56 Ps~~CC~~lk~~~-~ClC~~lk~~~--------~~~~---i~~~~a~~lp~~Cgv~~-p~C 103 (103)
.-..||+-|+..+ .|.|+.|+... +... -....|..||..||++. ..|
T Consensus 10 ~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C 70 (75)
T 1pnb_B 10 LREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTC 70 (75)
T ss_dssp CTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCC
T ss_pred HHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCC
Confidence 4467999999876 89999886521 1111 12345788999999984 445
No 16
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=64.02 E-value=0.92 Score=30.33 Aligned_cols=57 Identities=25% Similarity=0.535 Sum_probs=39.0
Q ss_pred cccCChhhhcCC----C-------CC-----------ChhhHHhhhhcC-ccccccccCcC--------cc-CCC--ChH
Q 036197 42 QLTPCLPAFTWT----A-------PP-----------STVCCNSLRQQR-PCLCTYLRNPL--------YK-QYY--DSP 87 (103)
Q Consensus 42 ~L~pC~~yv~~~----~-------~P-----------s~~CC~~lk~~~-~ClC~~lk~~~--------~~-~~i--~~~ 87 (103)
.|.+|..||... . .| -..||+-|+..+ .|.|+-|+... +. ..+ -..
T Consensus 26 ~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~qQgq~~gqq~~~~~q 105 (125)
T 1psy_A 26 DLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQ 105 (125)
T ss_dssp TTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHHHTTCCTTCSHHHHH
T ss_pred hHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 489999999531 0 12 146999999876 89999986421 11 111 234
Q ss_pred HHHHhhcccCC
Q 036197 88 NYRRIAVTCGV 98 (103)
Q Consensus 88 ~a~~lp~~Cgv 98 (103)
.|..||..||+
T Consensus 106 ~A~~LP~~C~i 116 (125)
T 1psy_A 106 RAGEIVSSCGV 116 (125)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHhhHHHcCC
Confidence 68999999998
No 17
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=63.50 E-value=0.79 Score=29.65 Aligned_cols=61 Identities=21% Similarity=0.387 Sum_probs=40.0
Q ss_pred ccCChhhhcC---C-C---CC---------ChhhHHhhhhcC-ccccccccCcC---ccCC-C-------ChHHHHHhhc
Q 036197 43 LTPCLPAFTW---T-A---PP---------STVCCNSLRQQR-PCLCTYLRNPL---YKQY-Y-------DSPNYRRIAV 94 (103)
Q Consensus 43 L~pC~~yv~~---~-~---~P---------s~~CC~~lk~~~-~ClC~~lk~~~---~~~~-i-------~~~~a~~lp~ 94 (103)
|.+|..|+.. + . .| -..||+-|+..+ .|.|.-|+... ...+ + ....|..||.
T Consensus 15 L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~~~~~~~a~~LP~ 94 (109)
T 1sm7_A 15 LRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPN 94 (109)
T ss_dssp CSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHHHHHHHTTSSHHH
T ss_pred HHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHhCHH
Confidence 8889999952 1 1 11 246999999976 89998886421 1100 0 2334778999
Q ss_pred ccCCCCC-CC
Q 036197 95 TCGVPFP-RC 103 (103)
Q Consensus 95 ~Cgv~~p-~C 103 (103)
.||++.+ .|
T Consensus 95 ~Cnl~~~~~C 104 (109)
T 1sm7_A 95 VCNMKQIGTC 104 (109)
T ss_dssp HSCCCSSCSS
T ss_pred hcCCCCCCCC
Confidence 9999854 35
No 18
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=38.16 E-value=13 Score=24.07 Aligned_cols=61 Identities=23% Similarity=0.415 Sum_probs=40.2
Q ss_pred ccCChhhhcC----C-C--CCC-------hhhHHhhhhcC-ccccccccCc---CccC--CC-------ChHHHHHhhcc
Q 036197 43 LTPCLPAFTW----T-A--PPS-------TVCCNSLRQQR-PCLCTYLRNP---LYKQ--YY-------DSPNYRRIAVT 95 (103)
Q Consensus 43 L~pC~~yv~~----~-~--~Ps-------~~CC~~lk~~~-~ClC~~lk~~---~~~~--~i-------~~~~a~~lp~~ 95 (103)
|..|..||.. + . .+. ..||+-|+..+ .|.|.-|+.. .... .+ -+..|..||..
T Consensus 18 L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~~~~~~q~A~~LP~~ 97 (114)
T 2lvf_A 18 LSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQMRRMMRLAENIPSR 97 (114)
T ss_dssp HHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhChHh
Confidence 7889999842 1 1 111 34999999987 8999988641 1110 01 13469999999
Q ss_pred cCCCCCCC
Q 036197 96 CGVPFPRC 103 (103)
Q Consensus 96 Cgv~~p~C 103 (103)
||+....|
T Consensus 98 C~i~p~~C 105 (114)
T 2lvf_A 98 CNLSPMRC 105 (114)
T ss_dssp HCCCCSCC
T ss_pred cCCCcccC
Confidence 99984445
No 19
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=35.36 E-value=5.7 Score=26.44 Aligned_cols=60 Identities=18% Similarity=0.333 Sum_probs=39.5
Q ss_pred ccCChhhhcCC-----C-CC----ChhhHHhhhhcC-ccccccccC---cCcc-------CC-CCh---------HHHHH
Q 036197 43 LTPCLPAFTWT-----A-PP----STVCCNSLRQQR-PCLCTYLRN---PLYK-------QY-YDS---------PNYRR 91 (103)
Q Consensus 43 L~pC~~yv~~~-----~-~P----s~~CC~~lk~~~-~ClC~~lk~---~~~~-------~~-i~~---------~~a~~ 91 (103)
|..|..||... . .| ...||.-|+..+ .|-|+-|.. ..+. .. =+. ..|+.
T Consensus 17 L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~pgC~re~~~~~A~~ 96 (122)
T 1b1u_A 17 LDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPK 96 (122)
T ss_dssp TTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCTTCCHHHHHHHGGG
T ss_pred chHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhccCCcHHHHHHHHHh
Confidence 78899999422 2 23 245999999987 899987743 1111 00 011 24778
Q ss_pred h--hcccCCCCCC
Q 036197 92 I--AVTCGVPFPR 102 (103)
Q Consensus 92 l--p~~Cgv~~p~ 102 (103)
| |..||+++++
T Consensus 97 Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 97 LVTEVECNLATIH 109 (122)
T ss_dssp TTSTTTTCCCCTT
T ss_pred cCCcccCCCCCCC
Confidence 9 9999998764
No 20
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=35.34 E-value=10 Score=25.30 Aligned_cols=59 Identities=22% Similarity=0.300 Sum_probs=39.1
Q ss_pred ccCChhhhcC-----CC-CC----ChhhHHhhhhcC-ccccccccC---cCcc-------CCC--C---------hHHHH
Q 036197 43 LTPCLPAFTW-----TA-PP----STVCCNSLRQQR-PCLCTYLRN---PLYK-------QYY--D---------SPNYR 90 (103)
Q Consensus 43 L~pC~~yv~~-----~~-~P----s~~CC~~lk~~~-~ClC~~lk~---~~~~-------~~i--~---------~~~a~ 90 (103)
|..|..||.. +. .| ...||.-|...+ .|-|+-|.. ..+. .+. + ...|+
T Consensus 17 L~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~pgC~re~~~~~A~ 96 (127)
T 1bea_A 17 LPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAA 96 (127)
T ss_dssp CHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCBTTBCHHHHHHHHT
T ss_pred chHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhcccccccccccccccCCCcHHHHHHHHH
Confidence 7889999942 12 23 234999999976 899987743 1111 011 1 22478
Q ss_pred Hh--hcccCCCCC
Q 036197 91 RI--AVTCGVPFP 101 (103)
Q Consensus 91 ~l--p~~Cgv~~p 101 (103)
.| |..||++++
T Consensus 97 ~Lv~P~~Cnl~~~ 109 (127)
T 1bea_A 97 TLVTEAECNLATI 109 (127)
T ss_dssp TTTSTTTTCCCCT
T ss_pred hcCCcccCCCCCC
Confidence 89 999999877
Done!