BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036199
(710 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 285/748 (38%), Positives = 407/748 (54%), Gaps = 97/748 (12%)
Query: 15 PTSFKVHHGMCTQLSKFVERIAKVFPEIEAARPRCSSGVQALCLLNNAIGKAKSLLQYCS 74
P S+K+H MC +L + V+RI ++FP+IE ARP CSSG+Q LCLL+NA+ K K LLQYCS
Sbjct: 10 PQSYKMHSSMCLELKRLVDRIMRIFPDIEDARPGCSSGIQTLCLLHNALDKTKQLLQYCS 69
Query: 75 ESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPVMLAVEISQIIDDLREATFILDS 134
ESSKLY+A+TG I++R R+ +EQ L+ I S+VP +L ++ISQI+ DLR L+
Sbjct: 70 ESSKLYMAVTGDAILARGSRAKKSLEQCLNDIRSIVPTILEIKISQIVQDLRSTQLTLEF 129
Query: 135 SDEEAGKVLRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIEKRSIKKLLDKV 194
S+EEAGK +REL+Q+ S+ S + EIK AA +L +++P+AI+ E+RS+K + +
Sbjct: 130 SEEEAGKAIRELMQKSTSSSASPD--EIKDFHYAALKLQLSTPEAIVTERRSLKIICE-- 185
Query: 195 GDSDQSKIKVLKYLFYLLKKYGNSVLGEQKDNACAQEEGSYTVCSQSFEVDSRVGDRKFG 254
+ K N+ + +D +
Sbjct: 186 ---------------------------DHKQNSFTHHQS----------IDDSLHANAAE 208
Query: 255 AQTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLV 314
A+ + +PE FKC LS +MYDPV+I SG TFERM IQKWF+EGN +CP +K KL
Sbjct: 209 AEASEEHNGTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLD 268
Query: 315 CQSLTPNTAMKDLISKWCMNLCSSMND---LHVP------LDISNMSLGS-----LDTSY 360
+L PN +K IS+WC + D HV +S S GS D S
Sbjct: 269 DFTLKPNVELKSQISEWCAKNGLDVQDPARKHVKASNSIDFSVSIASFGSSLYNIPDHSG 328
Query: 361 GSDTSSN-----------KIADGSNRTPLW-----TNVHDIDLSR----------LTELN 394
S T N K++ G TP+ + D D S LT L
Sbjct: 329 ISITDFNSSYSIDSSSYSKMSKGGYFTPMQRIDSASGAGDTDSSHSEIEIDPLCGLTNLP 388
Query: 395 WDCQCKVIEDYETRLEHDNQVSHSLSSTNFVEPLIRFLRDARDLHDSRAQRI--GCRLLL 452
WD Q KV+ED +R EH + S+S + F+EPLI +L++A + + + + I G LLL
Sbjct: 389 WDAQIKVVEDVRSRFEHSTRAFRSMSPSKFLEPLITYLKNALERNGTAGEIIKGGLDLLL 448
Query: 453 AFVSKNRSGIPYLNEDLFSLLASFLHSAAATEETLAILVALSSYAYFISKIVASGALASI 512
AF+S NR I L E++F + + FL S EE L IL LS++ + SKI +SG+L+S+
Sbjct: 449 AFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSL 508
Query: 513 LNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKDATLAVSCLVILKN 572
L +++S QE A+ L NLSS ++I + +F+ KL FL+ ++ILKN
Sbjct: 509 LKIVESQAEHLQEQAMITLKNLSSSMEICLEMVSLDFIQKLTSFLQQKVFCKHSIIILKN 568
Query: 573 MCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEG-- 630
+C+TE R C+ ET CL S+AELLE E+QE+A++ILL LC Q+ +YC LV+ E
Sbjct: 569 LCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQLCVQKIEYCCLVVREATD 628
Query: 631 VIPSLVKISVYGNDKAKVSALELRRLLRDVAYSVEQQCFGSEIDTSKDASS--------- 681
+ SL+ IS G ++ KVSA EL R L +V E++ S + +S
Sbjct: 629 IYSSLILISNNGTEEVKVSASELLRALVEVDSDKEEEEEVSSRPEGRTTASPTSQVVTPV 688
Query: 682 ---DPRKEKPSSKTSRIFGWKFPKLSKK 706
+P K PS K S +FG+ F L KK
Sbjct: 689 THPEPVKITPSPKKSGLFGFNFSSLKKK 716
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 227/747 (30%), Positives = 371/747 (49%), Gaps = 75/747 (10%)
Query: 4 DESEIVEIWSSPTSFKVHHGMCTQLSKFVERIAKVFPEIEAARPRCSSGVQALCLLNNAI 63
D +E+ E + + K+H MC +LS + ++ +FP +E ARPR SG+QALC L+ A+
Sbjct: 2 DVTELEENLFAASDAKLHGDMCKELSGVLCKVLSIFPSLEGARPRSKSGIQALCSLHIAL 61
Query: 64 GKAKSLLQYCSESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPVMLAVEISQIID 123
KAK++LQ+CSE SKLYLAITG ++ + ++ + L ++E +VP + +I +I+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKIALIDGLKRVEDIVPSSIGSQILEIVG 121
Query: 124 DLREATFILDSSDEEAGKVLRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIE 183
+L F+LD S++E G + LLQ+ + + +E++ AA+RL ITS + L E
Sbjct: 122 ELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCNDNTELEIFHRAATRLSITSSRVALAE 181
Query: 184 KRSIKKLLDKV-GDSDQSKIKVLKYLFYLLKK----YGNSVLGEQKDNA---CAQEEGSY 235
+R++KKL+D+ + D+ K ++ YL +L++K + + +L E C+ E
Sbjct: 182 RRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEILDENDSPGSYPCSPNEDHG 241
Query: 236 TVCSQSFEVDSRVG--DRKFGAQTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERM 293
+V ++ SR G + K N+ + PE +CP+SL+LM DPV+I SGQT+ER+
Sbjct: 242 SVHGFGRQL-SRFGSLNDKPMNSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERV 300
Query: 294 WIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVP------LD 347
I+KWF +G++TCPKT+ +L SLTPN +K LI+ WC N +P D
Sbjct: 301 CIEKWFSDGHNTCPKTQQQLPHISLTPNNCVKGLIASWC-----EQNGTQIPSGPPESQD 355
Query: 348 ISNMSLGSLDTSYGSDTSSNKIAD----GSNRTPLWTNVHDIDLSRLTELNW-------- 395
+ L D+ S N I G PL N + + TE ++
Sbjct: 356 LDYWRLALSDSESTKSQSVNSIGSYKLKGVKIVPLEENGTTVVERQNTEESFVSDDDDEE 415
Query: 396 -----------------------DCQCKVIEDYETRLEHDNQVSHSLSSTNFVEPLIRFL 432
+ +CKV+E L+ D + + + FVE L+RFL
Sbjct: 416 DSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIRLLLKDDEEARIFMGANGFVEALLRFL 475
Query: 433 RDARDLHDSRAQRIGCRLLLAF-VSKNRSGIPYLNEDLFSLLASFLHSAAATEETLAILV 491
A D +++ AQ G L V+ NR+ L + LL + SA + A+ +
Sbjct: 476 GSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYL 535
Query: 492 ALSSYAYFISKIVASGALASILNMLDSPNGKFQEL-AIKILHNLSSDVDIQSHIAPSEFL 550
LS S I +S A+ ++ +L +L A+ L+NLS+ + S +
Sbjct: 536 NLSCLDEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNII 595
Query: 551 PKLVPFLKDATLAV---SCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEH 607
L L + L +L N+ +++ + V + G + S+A +L++G +QE
Sbjct: 596 KSLQGLLASTGENLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQ 655
Query: 608 AVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLRDVAYSVEQQ 667
AV+ LL LC+ R+ ++V+ EGVIPSLV ISV G + + + +L L R+ E+Q
Sbjct: 656 AVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFRE-----ERQ 710
Query: 668 CFGSEIDTSKDASSDPRKEKPSSKTSR 694
+D S R E P + +R
Sbjct: 711 --------QRDQPSSNRDEPPQKEPAR 729
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 215/722 (29%), Positives = 362/722 (50%), Gaps = 83/722 (11%)
Query: 4 DESEIVEIWSSPTSFKVHHGMCTQLSKFVERIAKVFPEIEAARPRCSSGVQALCLLNNAI 63
D SE+ E + + K+H MC +LS ++ +FP +E ARPR SG+Q LC L+ A+
Sbjct: 2 DVSELEENLFAASDAKLHGDMCKELSAVYCKVLSIFPSLEEARPRSKSGIQTLCSLHIAL 61
Query: 64 GKAKSLLQYCSESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPVMLAVEISQIID 123
KAK++LQ+CSE SKLYLAITG ++ + ++ + + SL ++E +VP + +I I+
Sbjct: 62 EKAKNILQHCSECSKLYLAITGDAVLLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIVG 121
Query: 124 DLREATFILDSSDEEAGKVLRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIE 183
+L F+LD S++E G + LLQ+ + + +E++ AA+RL ITS ++ L E
Sbjct: 122 ELEHTKFLLDPSEKEVGDRIIALLQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAE 181
Query: 184 KRSIKKLLDKVG-DSDQSKIKVLKYLFYLLKKYGN---SVLGEQKDNACAQEEGSYTVCS 239
+R++KK++D+ + D+ K ++ YL +L++KY S + ++ D+ C+ T CS
Sbjct: 182 RRALKKVIDRARVEEDKRKESIVAYLLHLMRKYSKLFRSEMMDENDSPCS------TPCS 235
Query: 240 QSFEVDSRVGDRKFGAQTNNLSR--------------AIIPEVFKCPLSLRLMYDPVVIE 285
+ + + FG Q + I PE +CP+SL+LMYDPV+I
Sbjct: 236 PTGQGPNEDRVNAFGRQLSKFGSINYKPMNSRKSGQMPIPPEELRCPISLQLMYDPVIIA 295
Query: 286 SGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVP 345
SGQT+ER+ I+KWF +G+++CPKT+ +L SLTPN +K LI+ WC N + VP
Sbjct: 296 SGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVKGLIASWC-----EQNGITVP 350
Query: 346 ------LDISNMSLGSLDT---------SYG---------------SDTSSNKIADGSNR 375
LD++ L D+ S G S S + N
Sbjct: 351 TGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEESSTIESERQQKEKNN 410
Query: 376 TP--------LWTNVHDIDLSRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFVEP 427
P + DI E + +CKV+E+ L+ + + + + FVE
Sbjct: 411 APDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDNEEARILMGANGFVEA 470
Query: 428 LIRFLRDARDLHDSRAQRIGCRLLLAF-VSKNRSGIPYLNEDLFSLLASFLHSAAATEET 486
++FL A +++ AQ G L V+ NR+ L + LL + + +
Sbjct: 471 FLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMISCSQSQGPA 530
Query: 487 LAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQEL-AIKILHNLSSDVDIQSHIA 545
A+ + LS I +S A++ +N+L +L A+ L+NLS+ S
Sbjct: 531 TALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNLST----YSPNI 586
Query: 546 PSEFLPKLVPFLKDATLAVS--------CLVILKNMCNTEHARVCVVETSGCLPSVAELL 597
P+ ++ L+ LA + L +L N+ ++ + ++ T G + ++A +L
Sbjct: 587 PTLLSSNIIKSLQ--VLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVL 644
Query: 598 EIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLL 657
+ G +QE AV+ L+ LC+ + ++V+ EGVIPSLV ISV G+ + + + +L L
Sbjct: 645 DTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLF 704
Query: 658 RD 659
R+
Sbjct: 705 RE 706
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 284 bits (726), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 226/732 (30%), Positives = 361/732 (49%), Gaps = 103/732 (14%)
Query: 4 DESEIVEIWSSPTSFKVHHGMCTQLSKFVERIAKVFPEIEAARPRCSSGVQALCLLNNAI 63
D +E+ E + +P K+H MC LS +I +FP +EAARPR SG+QALC L+ +
Sbjct: 2 DVNEVEENFFAPGDAKLHGKMCNALSVIYCKIMSIFPSLEAARPRSKSGIQALCSLHVVL 61
Query: 64 GKAKSLLQYCSESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPVMLAVEISQIID 123
K K++L++C+ESSKLYLAITG +V + ++ + + SL ++E +V + ++ +I+
Sbjct: 62 EKVKNILRHCTESSKLYLAITGDSVVLKFEKAKSSLTDSLRRVEDIVQQSIGSQLLEILM 121
Query: 124 DLREATFILDSSDEEAGKVLRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIE 183
+L F LD +++E G + LLQ+ + S + +E++ AA+RL ITS +A L E
Sbjct: 122 ELENTEFSLDPAEKEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTE 181
Query: 184 KRSIKKLLDKVG-DSDQSKIKVLKYLFYLLKKYGNSVLGEQKDNACAQEEGSYTVCSQSF 242
+R +KKL+++ + D+ K ++ YL +L++KY E D+ +Q S CS +
Sbjct: 182 RRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLP-CSPTI 240
Query: 243 E--VDSRVGDRKFGAQTNNLSR---------------AIIPEVFKCPLSLRLMYDPVVIE 285
+ +D G R F Q + LS ++ PE +CP+SL+LMYDPV+I
Sbjct: 241 QGSIDDAHG-RAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISLQLMYDPVIIA 299
Query: 286 SGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVP 345
SGQT+ER+ I+KWF +G++TCPKT +L LTPN +K LIS WC N + VP
Sbjct: 300 SGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWC-----EQNGVQVP 354
Query: 346 ------LDISNMSLG-----SLDTSYGSDTSSNKIAD---------GSNR---------- 375
LD++ L S DT S K+ D G+ +
Sbjct: 355 DGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPLEESGTIKEEACESEYQE 414
Query: 376 ---------TPLWTNVHDIDLSRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFVE 426
T L T + D+D R +C+V+E L+ D + + VE
Sbjct: 415 DQVTLVERCTELLTTLTDVDTLRK-------KCRVVEQIRVLLKDDEEARILMGENGCVE 467
Query: 427 PLIRFLRDARDLHDSRAQRIGCRLLLAF-VSKNRSGIPYLNEDLFSLLASFLHSAAATEE 485
L++FL A + +++ AQ++G L V NR+ L + LL L + +
Sbjct: 468 ALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEMLCNPHSHGS 527
Query: 486 TLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKI--LHNLSSDVDIQSH 543
AI + LS I +S A+ ++N+L + E+ K+ LH+L H
Sbjct: 528 VTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTET----EVQCKVDALHSL-------FH 576
Query: 544 IAPSEFLPKLVPFLKDATL--AVSCLVILKNMCNTEHARVC-------------VVETSG 588
++ P +P L A L A+ L I TE + +V
Sbjct: 577 LST---YPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPS 633
Query: 589 CLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKV 648
+ ++ +L+ G +QE AV++LL LC+ + ++V+ EGVIPSLV ISV G + +
Sbjct: 634 LVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRE 693
Query: 649 SALELRRLLRDV 660
A +L L R++
Sbjct: 694 RAQKLLTLFREL 705
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 166/656 (25%), Positives = 300/656 (45%), Gaps = 65/656 (9%)
Query: 24 MCTQLSKFVERIAKVFPEI-EAARPRCSSGVQALCLLNNAIGKAKSLLQYCSESSKLYLA 82
+C L++ ++ + +F EI E+ P ++ L L A+ AK L++CS+ SK+YL
Sbjct: 32 LCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLV 91
Query: 83 ITGGVIVSRCMRSTNMMEQSLSQI---ESMVPVMLAVEISQIIDDLREATFILDSSDEEA 139
+ + S+ M + +EQSLSQI E + + ++ ++ R A +D SD+E
Sbjct: 92 MEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRVDVSDDEL 151
Query: 140 GKVLRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIEKRSIKKLLDKVGDSDQ 199
+ L+ L + S +D+ + L+ A +L + + E ++ +++ G
Sbjct: 152 YEDLQSLCNKS-SDVDAYQ----PVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVG 206
Query: 200 SKIKVLKYLFYLLKKYGNSVLGEQKDNACAQEEGSYTVCSQSFEVDSRVGDRKFGAQTNN 259
I+ + + ++K + + + DN Q+ G V+SR + A +
Sbjct: 207 ENIEEMAMVLKMIKDFVQT----EDDNGEEQKVG----------VNSRSNGQTSTAASQK 252
Query: 260 LSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLT 319
+ +IP+ F+CP+SL +M DPV++ SGQT+ER I+KW E G+ TCPKT+ L +LT
Sbjct: 253 IP--VIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLT 310
Query: 320 PNTAMKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTSSNKIADGSNRTPLW 379
PN ++ LI++WC ND+ P S++ + +S+ S +NKI D +W
Sbjct: 311 PNYVLRSLIAQWC-----EANDIEPPKPPSSLRPRKV-SSFSSPAEANKIED-----LMW 359
Query: 380 TNVHDIDLSRLTELNWDCQCKVIEDYE--TRLEHDNQVSHSLSSTNFVEPLIRFLRDARD 437
RL N + Q + + DN+V +++ + L+ L
Sbjct: 360 ---------RLAYGNPEDQRSAAGEIRLLAKRNADNRV--AIAEAGAIPLLVGLL----S 404
Query: 438 LHDSRAQR--IGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLH--SAAATEETLAILVAL 493
DSR Q + L L+ N+ I ++ + L S A E A L +L
Sbjct: 405 TPDSRIQEHSVTALLNLSICENNKGAI--VSAGAIPGIVQVLKKGSMEARENAAATLFSL 462
Query: 494 SSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKL 553
S I A GA+ ++ +L+ + ++ A L NL + + +P L
Sbjct: 463 SVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTL 522
Query: 554 VPFLKD--ATLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAI 611
L + + + L IL + + + ++ +S +PS+ E + GS ++E+A A+
Sbjct: 523 TRLLTEPGSGMVDEALAILAILSSHPEGK-AIIGSSDAVPSLVEFIRTGSPRNRENAAAV 581
Query: 612 LLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLRDVAYSVEQQ 667
L+ LCS Q+ G++ L+ ++ G D+ K A + LL ++ EQQ
Sbjct: 582 LVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQ---LLERISRLAEQQ 634
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 164/670 (24%), Positives = 298/670 (44%), Gaps = 81/670 (12%)
Query: 6 SEIVEIWSSPTSFKVHHGMCTQLSKFVERIAKVFPEIEAARPRCSSGVQALCLLNNAIGK 65
+EI I S T K H C LS+ + + + EI + S V AL + ++
Sbjct: 18 NEIASISDSVTPMKKH---CANLSRRLSLLLPMLEEIRDNQESSSEVVNALLSVKQSLLH 74
Query: 66 AKSLLQYCSESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPVMLAVEISQIIDDL 125
AK LL + S SK+YL + ++ + + T+++EQ+LS ++ E +I D+L
Sbjct: 75 AKDLLSFVSHVSKIYLVLERDQVMVKFQKVTSLLEQALS--------IIPYENLEISDEL 126
Query: 126 REATFIL-----DSSDEEAGKVLRELLQEDVSAIDSLEFS--EIKALQLAASRLCITSPK 178
+E ++ S + G V + L +DV ++ S S E ++ A +L + +
Sbjct: 127 KEQVELVLVQLRRSLGKRGGDVYDDELYKDVLSLYSGRGSVMESDMVRRVAEKLQLMTIT 186
Query: 179 AILIEKRSIKKLL-----DKVGDSDQSKIKVLKYLFYLLKKYGNSVLGEQKDNACAQEEG 233
+ E ++ ++ D G+S + VLK + ++ Y ++ D+A + +
Sbjct: 187 DLTQESLALLDMVSSSGGDDPGESFEKMSMVLKKIKDFVQTYNPNL-----DDAPLRLKS 241
Query: 234 SYTVCSQSFEVDSRVGDRKFGAQTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERM 293
S SR DR I PE F+CP+SL LM DPV++ SGQT+ER
Sbjct: 242 SLP--------KSRDDDRDM---------LIPPEEFRCPISLELMTDPVIVSSGQTYERE 284
Query: 294 WIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVPL--DISNM 351
I+KW E G+ TCPKT+ L +TPN ++ LI++WC + N + P +IS
Sbjct: 285 CIKKWLEGGHLTCPKTQETLTSDIMTPNYVLRSLIAQWCES-----NGIEPPKRPNISQP 339
Query: 352 SLGSLDTSYGSDTSSNKIADGSNRTPLWTNVHDIDLSRLTELNWDCQCKVIEDYETRLEH 411
S + +S D NKI + L +LT + + + +
Sbjct: 340 SSKASSSSSAPDDEHNKIEEL--------------LLKLTSQQPEDRRSAAGEIRLLAKQ 385
Query: 412 DNQVSHSLSSTNFVEPLIRFLRDARDLHDSRAQR--IGCRLLLAFVSKNRSGIPYLNEDL 469
+N +++++ + L+ L + +DSR Q + L L+ +N+ I Y + +
Sbjct: 386 NNHNRVAIAASGAIPLLVNLLTIS---NDSRTQEHAVTSILNLSICQENKGKIVYSSGAV 442
Query: 470 FSLLASFLH-SAAATEETLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAI 528
++ S A E A L +LS I A+GA+ ++ +L + + ++ A
Sbjct: 443 PGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAA 502
Query: 529 KILHNLSSDVDIQSHIAPSEFLPKLVPFLKD-----ATLAVSCLVILKNMCNTEHARVCV 583
L NL + + +P L+ L + ++S L IL + + +
Sbjct: 503 TALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSE---- 558
Query: 584 VETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGN 643
V + +P + + + GS ++E++ A+L+ LCS Q+ G++ L++++ G
Sbjct: 559 VGAADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIMDLLIEMAENGT 618
Query: 644 DKAKVSALEL 653
D+ K A +L
Sbjct: 619 DRGKRKAAQL 628
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 44/415 (10%)
Query: 256 QTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
+++NL+ IPE F CP+SL LM DP ++ +GQT+ER +IQ+W + GN +CPKT+ KL
Sbjct: 237 KSDNLT---IPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLEN 293
Query: 316 QSLTPNTAMKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTSSNKIADGSNR 375
+LTPN ++ LIS+WC + +++ P G K +DGS R
Sbjct: 294 FTLTPNYVLRSLISQWC-----TKHNIEQP--------------GGYMNGRTKNSDGSFR 334
Query: 376 TPLWTNVHDI--DLSRLTELNWDCQCKVIEDYETRLEHDNQVSHS-------LSSTNFVE 426
D+ D+S + L + IED T + +S ++ +
Sbjct: 335 --------DLSGDMSAIRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIP 386
Query: 427 PLIRFLRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEET 486
L++ L D +++ + C L L+ N+ I +L S A E
Sbjct: 387 VLVKLLTSDGD-TETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENA 445
Query: 487 LAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAP 546
A L +LS I ASGA+ +++++L + + ++ A L NL +
Sbjct: 446 AATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVR 505
Query: 547 SEFLPKLVPFLKDAT---LAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEE 603
+ + LV L D++ +A L IL + + + A+ ++ + +P + + L+
Sbjct: 506 AGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILR-ANAIPPLIDCLQKDQPR 564
Query: 604 DQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLR 658
++E+A AILLCLC + + + G + L+++S G ++AK A L LLR
Sbjct: 565 NRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLR 619
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 179/403 (44%), Gaps = 40/403 (9%)
Query: 264 IIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTA 323
IIP+ F+CP+SL LM DPV++ SGQT+ER IQKW + G+ TCPKT+ L SLTPN
Sbjct: 227 IIPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFV 286
Query: 324 MKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTSSNKIADGSNRTPLWTNVH 383
+K LIS+WC N + +P + N D + K +D + +
Sbjct: 287 LKSLISQWC-----EANGIELPKNKQN----------SRDKKAAKSSD-------YDHAG 324
Query: 384 DIDL-SRLTELNWDCQCKVIEDYETRLEHDNQVSHS--LSSTNFVEPLIRFLRDARDLHD 440
+ L +RL N D Q E RL V++ ++ + L+ L + D
Sbjct: 325 LVSLMNRLRSGNQDEQRAAA--GEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSS----D 378
Query: 441 SRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAA--ATEETLAILVALSSYAY 498
R Q LL + ++ + L + + E A L +LS
Sbjct: 379 PRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDE 438
Query: 499 FISKIVASGALASILNML--DSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPF 556
I A+GA+ ++N+L SP GK A + NL + + + L+ F
Sbjct: 439 NKVTIGAAGAIPPLINLLCDGSPRGKKD--AATAIFNLCIYQGNKVRAVKAGIVIHLMNF 496
Query: 557 LKDATLAV--SCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLC 614
L D T + L +L + ++ V+ S +P + E+++ GS ++E+A AIL
Sbjct: 497 LVDPTGGMIDEALSLLSILAGNPEGKI-VIARSEPIPPLVEVIKTGSPRNRENAAAILWL 555
Query: 615 LCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLL 657
LCS + GV +L ++S G D+AK A + L+
Sbjct: 556 LCSADTEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELM 598
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 185/405 (45%), Gaps = 40/405 (9%)
Query: 264 IIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTA 323
+IPE F+CP+SL LM DPV++ +GQT+ER IQKW + G+ TCPK++ L+ LTPN
Sbjct: 247 VIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYV 306
Query: 324 MKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTS-YGSDTSSNKIADGSNRTPLWTNV 382
+K LI+ WC + N + +P + GS T+ G +SS+ +RT +
Sbjct: 307 LKSLIALWCES-----NGIELP-----QNQGSCRTTKIGGSSSSD-----CDRTFV---- 347
Query: 383 HDIDLSRLTEL-NWDCQCKVIEDYETRLEHDNQVSHS--LSSTNFVEPLIRFLRDARDLH 439
LS L +L N + + E RL V + ++ + L+ L
Sbjct: 348 ----LSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSP---- 399
Query: 440 DSRAQR--IGCRLLLAFVSKNRSGIPYLNE--DLFSLLASFLHSAAATEETLAILVALSS 495
D R Q + L L+ N+ I D+ +L + S A E A L +LS
Sbjct: 400 DPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKN--GSMEARENAAATLFSLSV 457
Query: 496 YAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVP 555
I A+GA+ +++++L+ + ++ A + NL +S + L
Sbjct: 458 IDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTR 517
Query: 556 FLKDA--TLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILL 613
LKDA + L IL + + + + E +P + E++ GS ++E+A AIL
Sbjct: 518 LLKDAGGGMVDEALAILAILSTNQEGKTAIAEAE-SIPVLVEIIRTGSPRNRENAAAILW 576
Query: 614 CLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLR 658
LC + + G +L +++ G D+AK A L L++
Sbjct: 577 YLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQ 621
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 148/620 (23%), Positives = 259/620 (41%), Gaps = 75/620 (12%)
Query: 65 KAKSLLQYCSESSKLYLAITGGVIVSRCMRSTNMMEQSLSQIESMVPV---MLAVEISQI 121
++K L+ YC++SSKL+L + I + + Q +S + ++PV L+ +I +
Sbjct: 116 RSKILVDYCAQSSKLWLLLQNPSISGYF----HDLNQEISTLLDVLPVNDLGLSDDIREQ 171
Query: 122 IDDL----REATFILDSSDEEAGKVLRELLQEDVSAIDSLEFSEIKA----LQLAASRLC 173
I+ L R+A +D +DE LRE S +D E +I + +L
Sbjct: 172 IELLQRQSRKARLYIDKNDES----LRESF---YSFLDGFENGKIPSSVDLRMFFVEKLG 224
Query: 174 ITSPKAILIEKRSIKKL-------LDKVGDSDQSKIKVLKYLFYLLKKYGNSVLGEQKDN 226
I K+ E +++ L+ G + + +Y +LL +
Sbjct: 225 IRDSKSCRSEIEFLEEQIVNHDGDLEPTGSVINGFVAITRYCRFLLFGF----------- 273
Query: 227 ACAQEEGSYTVCSQSFEVDSRVGDRKFGAQTNNLSRAIIPEVFKCPLSLRLMYDPVVIES 286
+E+G E + + + F AQ + +P+ F CP+SL LM DPV+I +
Sbjct: 274 ---EEDG----MEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIIST 326
Query: 287 GQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVPL 346
GQT++R I +W EEG+ TCPKT L+ + PN A+K+LI +WC S ++
Sbjct: 327 GQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCT--ASGISYESEFT 384
Query: 347 DISNMSLGSLDTSYGSDTSSNKIADGSNRTPLWTNVHDIDLSRLTELNWDCQCKVIEDYE 406
D N S S K A +N+ + I + L + + Q +
Sbjct: 385 DSPNESFAS--------ALPTKAAVEANKATV-----SILIKYLADGSQAAQTVAAREIR 431
Query: 407 TRLEHDNQVSHSLSSTNFVEPLIRFLRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLN 466
+ + ++ + L R L + ++ + L L+ KN+S I
Sbjct: 432 LLAKTGKENRAYIAEAGAIPHLCRLLTSENAI--AQENSVTAMLNLSIYEKNKSRIMEEG 489
Query: 467 ---EDLFSLLASFLHSAAATEETLAILVALSSYAYFISKIVASGALASILNML---DSPN 520
E + S+L S L + A E A L +LS+ + +I L +L +P
Sbjct: 490 DCLESIVSVLVSGL-TVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPR 548
Query: 521 GKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKDATLAVSCLVILKNMCNTEHAR 580
GK + A+ L+NLS+ D S + + LV LK+ +A L +
Sbjct: 549 GK--KDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKNEGVAEEAAGALALLVRQSLGA 606
Query: 581 VCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLC-SQRDQYCKLVMNEGVIPSLVKIS 639
+ + + + ++ G+ +E+AVA LL LC S + V+ I L++
Sbjct: 607 EAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTL 666
Query: 640 VY-GNDKAKVSALELRRLLR 658
++ G +A+ A L R+ +
Sbjct: 667 LFTGTKRARRKAASLARVFQ 686
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 257 TNNLSRAI-IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
+N SR I IP+ F+CP+SL LM DPV++ +GQT+ER I+KW G+HTCP T+ K+
Sbjct: 264 SNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMST 323
Query: 316 QSLTPNTAMKDLISKWC 332
+LTPN ++ LIS+WC
Sbjct: 324 SALTPNYVLRSLISQWC 340
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 586 TSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDK 645
+SG +PS+ +L+ GS E +E+A A L L S D+Y + G IP+LV + G+ +
Sbjct: 448 SSGAVPSIVHVLKNGSMEARENAAATLFSL-SVIDEYKVTIGGMGAIPALVVLLGEGSQR 506
Query: 646 AKVSA 650
K A
Sbjct: 507 GKKDA 511
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 479 SAAATEETLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDV 538
S ++ A L L Y + + +G + I+ ++ +P G + A+ IL LSS
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHP 563
Query: 539 DIQSHIAPSEFLPKLVPFLKDATL--AVSCLVILKNMCNTEHARVCVVETSGC--LPSVA 594
+ ++ I +E +P LV + T + ++ ++C+ EH V + C + +
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLR 623
Query: 595 ELLEIGSEEDQEHAVAIL 612
EL G++ + AV +L
Sbjct: 624 ELALNGTDRGKRKAVQLL 641
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 503 IVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKDATL 562
I +GA+ +L++L S + + QE A+ L NLS D ++ I S +P +V LK+ ++
Sbjct: 405 IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSM 464
Query: 563 AV--SCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRD 620
+ L ++ + +V + G +P++ LL GS+ ++ A A L LC +
Sbjct: 465 EARENAAATLFSLSVIDEYKV-TIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQG 523
Query: 621 QYCKLVMNEGVIP 633
+ + G++P
Sbjct: 524 NKGRAI-RAGLVP 535
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 257 TNNLSRAI-IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
+N SR I IP+ F+CP+SL LM DPV++ +GQT+ER I+KW G+HTCP T+ K+
Sbjct: 264 SNGDSRPITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMST 323
Query: 316 QSLTPNTAMKDLISKWC 332
+LTPN ++ LIS+WC
Sbjct: 324 SALTPNYVLRSLISQWC 340
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 586 TSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDK 645
+SG +PS+ +L+ GS E +E+A A L L S D+Y + G IP+LV + G+ +
Sbjct: 448 SSGAVPSIVHVLKNGSMEARENAAATLFSL-SVIDEYKVTIGGMGAIPALVVLLGEGSQR 506
Query: 646 AKVSA 650
K A
Sbjct: 507 GKKDA 511
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 479 SAAATEETLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDV 538
S ++ A L L Y + + +G + I+ ++ +P G + A+ IL LSS
Sbjct: 504 SQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHP 563
Query: 539 DIQSHIAPSEFLPKLVPFLKDATL--AVSCLVILKNMCNTEHARVCVVETSGC--LPSVA 594
+ ++ I +E +P LV + T + ++ ++C+ EH V + C + +
Sbjct: 564 EGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLR 623
Query: 595 ELLEIGSEEDQEHAVAIL 612
EL G++ + AV +L
Sbjct: 624 ELALNGTDRGKRKAVQLL 641
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 4/133 (3%)
Query: 503 IVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKDATL 562
I +GA+ +L++L S + + QE A+ L NLS D ++ I S +P +V LK+ ++
Sbjct: 405 IAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSM 464
Query: 563 AV--SCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRD 620
+ L ++ + +V + G +P++ LL GS+ ++ A A L LC +
Sbjct: 465 EARENAAATLFSLSVIDEYKV-TIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQG 523
Query: 621 QYCKLVMNEGVIP 633
+ + G++P
Sbjct: 524 NKGRAI-RAGLVP 535
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 31 FVERIAKVFPEIEAAR----PRCSSGVQALCLLNNAIGKAKSLLQYCSESSKLYLAITGG 86
V R+ + P ++ R P C L L AK LL+ CS SK+Y+A+ G
Sbjct: 81 LVRRLKILIPFLDEIRGFESPSCK---HFLNRLRKVFLAAKKLLETCSNGSKIYMALDGE 137
Query: 87 VIVSRCMRSTNMMEQSLSQI---ESMVPVMLAVEISQIIDDLREATFILDSSD-EEAGKV 142
+++R + + L + E M+ EI + L++A D+ D E A +
Sbjct: 138 TMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDM 197
Query: 143 LRELLQEDVSAIDSLEFSEIKALQLAASRLCITSPKAILIEKRSIKKLL-DKVGDSDQSK 201
+ + D DS ++ A +L + + + E +I+ L+ DK G + ++K
Sbjct: 198 MVVFSKTDPRNADS------AIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGLNIETK 251
Query: 202 IKVLKYLFYLLKKYGNSVLGEQKDNACAQEEGSYTVCSQSFEVDSRVGDRKFGAQTNNLS 261
+++ LL K+ Q E + +
Sbjct: 252 ----QHIIELLNKFKKL---------------------QGLEATDILYQPVINKAITKST 286
Query: 262 RAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPN 321
I+P F CP++L +M DPV+I +GQT+E+ IQKWF+ G+ TCPKT+ +L SL PN
Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPN 346
Query: 322 TAMKDLISKWCMNLCSSMNDLHVP 345
A+K+LI +WC N+ +P
Sbjct: 347 FALKNLIMQWC-----EKNNFKIP 365
Score = 38.1 bits (87), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 544 IAPSEFLPKLVPFLK--DATLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGS 601
IA + +P LV L D+ + + + L N+ + + ++ G +P++ E+LE G+
Sbjct: 417 IANAGAIPLLVQLLSYPDSGIQENAVTTLLNL-SIDEVNKKLISNEGAIPNIIEILENGN 475
Query: 602 EEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSAL 651
E +E++ A L L + + ++ G IP LV + +G + K AL
Sbjct: 476 REARENSAAALFSLSMLDENKVTIGLSNG-IPPLVDLLQHGTLRGKKDAL 524
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 77/149 (51%), Gaps = 28/149 (18%)
Query: 184 KRSIKKLLDKVGDSDQSKIKVLKYLFYLLKKYGNSVLGEQKDNACAQEEGSYTVCSQSFE 243
KR +KKLL K+ D D ++ + L +D A E + ++S
Sbjct: 21 KREMKKLLIKIDDEDDLGVQTIDQL---------------QDALSALREATMRKMAKSSS 65
Query: 244 VDSRVGDRKFGAQTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGN 303
++ L PE F+CPLS LM DPVV+ SGQT+++++IQKW GN
Sbjct: 66 LEM-------------LETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGN 112
Query: 304 HTCPKTKMKLVCQSLTPNTAMKDLISKWC 332
TCPKT+ L +LTPN ++++ISKWC
Sbjct: 113 RTCPKTQQVLPHTALTPNLLIREMISKWC 141
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP F CP+SL LM DPV++ +GQT+ER +IQ+W + GN TCPKT+ KL +LTPN +
Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVL 300
Query: 325 KDLISKWC 332
+ LIS+WC
Sbjct: 301 RSLISRWC 308
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 4/180 (2%)
Query: 482 ATEETLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQ 541
A E A L +LS I SGA+ +++++L++ + ++ A L NL +
Sbjct: 430 ARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNK 489
Query: 542 SHIAPSEFLPKLVPFLKDAT---LAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLE 598
+ + LV L D+T + L IL + N + A+ +V+ + LP++ +L+
Sbjct: 490 GRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVK-ANTLPALIGILQ 548
Query: 599 IGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLR 658
++E+A AILL LC + + + G + L+ +S G ++ K A+ L LLR
Sbjct: 549 TDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 4/138 (2%)
Query: 503 IVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKDATL 562
I +GA+ ++N+L S + QE AI + NLS + + I + + +V L+ T+
Sbjct: 369 IAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTM 428
Query: 563 AV--SCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQRD 620
+ L ++ + ++ ++ SG +P++ +LLE G+ ++ A L LC
Sbjct: 429 EARENAAATLFSLSLADENKI-IIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHG 487
Query: 621 QYCKLVMNEGVIPSLVKI 638
+ V G++ +LVK+
Sbjct: 488 NKGRAV-RAGIVTALVKM 504
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 171/407 (42%), Gaps = 53/407 (13%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
+P+ F CP+SL LM DPVV +GQT++R I +W EEG+ TCP + L L PN A+
Sbjct: 297 VPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRAL 356
Query: 325 KDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTSSNKIAD-----GSNRTPLW 379
+ LIS+WC G Y S S+ +A+ S+R +
Sbjct: 357 RSLISQWC---------------------GVYGLQYDSPESNEGMAECVAASCSSRAAME 395
Query: 380 TNVHDID-LSRLTELNWDCQCKVIEDYETRL--EHDNQVSHSLSSTNFVEPLIRFLRDAR 436
N L R+ E + K + E RL + Q ++ + L R L
Sbjct: 396 ANKATARILVRMLE-DGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLS-- 452
Query: 437 DLHDSRAQR--IGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAAT---EETLAILV 491
+D AQ + L L+ N+ I E L+ L + T E A L
Sbjct: 453 --NDWMAQENAVTALLNLSIFEPNKGRI-MEQEGCLRLIVGVLQNGWTTEAKENAAATLF 509
Query: 492 ALSSYAYFISKIV-ASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFL 550
+LS F I+ GA+ + +ML + ++ A+ L NLS+ + + + S +
Sbjct: 510 SLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAV 569
Query: 551 PKLVPFLKDATL---AVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEH 607
L+ L++ T+ A L +L + H V + + S+ L+ G+ + +E+
Sbjct: 570 VALIQSLRNDTVSEEAAGALALLMKQPSIVH---LVGSSETVITSLVGLMRRGTPKGKEN 626
Query: 608 AVAILLCLCSQRDQYCKLVMNEGVIPSL----VKISVYGNDKAKVSA 650
AV+ L +C R LV IP L I++ G +AK A
Sbjct: 627 AVSALYEIC--RRGGSALVQRVAKIPGLNTVIQTITLNGTKRAKKKA 671
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 18/133 (13%)
Query: 256 QTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
QT S AI+ + F CPLSL +M DPV++ SGQT+E+ +I++W + G CPKT+ L
Sbjct: 222 QTQTSSVAILADFF-CPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTH 280
Query: 316 QSLTPNTAMKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLD---------TSYGSDTSS 366
+L PN +K LI+ WC ND+ +P + SL L S G+D S+
Sbjct: 281 TTLIPNYTVKALIANWC-----ETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSA 335
Query: 367 NKIADGSNRTPLW 379
K+ SN++ W
Sbjct: 336 RKV---SNKSHDW 345
Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 91/182 (50%), Gaps = 2/182 (1%)
Query: 479 SAAATEETLAILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDV 538
S+ A E + A L +LS KI SGA+ ++++L + + ++ A L NLS
Sbjct: 637 SSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQ 696
Query: 539 DIQSHIAPSEFLPKLVPFLKDATLAVS-CLVILKNMCNTEHARVCVVETSGCLPSVAELL 597
+ ++ I S + L+ + A V + +L N+ R + + G +P + E++
Sbjct: 697 ENKAMIVQSGAVRYLIDLMDPAAGMVDKAVAVLANLATIPEGRNAIGQ-EGGIPLLVEVV 755
Query: 598 EIGSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLL 657
E+GS +E+A A LL L + ++C +V+ EG +P LV +S G +A+ A L
Sbjct: 756 ELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYF 815
Query: 658 RD 659
R+
Sbjct: 816 RN 817
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 258 NNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQS 317
+LS A IP F+CP++L LM DPVV+ +GQT++R I W + G++TCPKT L S
Sbjct: 267 QSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTS 326
Query: 318 LTPNTAMKDLISKWCMN 334
L PN A+K+LI WC +
Sbjct: 327 LVPNRALKNLIVLWCRD 343
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
+P F+C LSL LM DPV++ SGQTFER++IQKW + G CPKT+ L +LTPN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 325 KDLISKWC 332
+ ++ WC
Sbjct: 300 RAFLASWC 307
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 7/221 (3%)
Query: 442 RAQRIGCRLLLAFVSKNRSGIP---YLNEDLFSLLASFLHSAAATEETLAILVALSSYAY 498
+A + C L L+ N+S I + + L +L A A + A L +LS
Sbjct: 480 QADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKAN--SAATLFSLSVIEE 537
Query: 499 FISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLK 558
+ ++I +GA+ ++++L S + ++ A L NLS + ++ + + + LV +
Sbjct: 538 YKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMD 597
Query: 559 DA-TLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCS 617
A + +V+L N+ ++ + E G +P + E++E+GS +E+A A LL LC+
Sbjct: 598 PAFGMVEKAVVVLANLATVREGKIAIGEEGG-IPVLVEVVELGSARGKENATAALLQLCT 656
Query: 618 QRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLR 658
++C V+ EGVIP LV ++ G + K A L + +
Sbjct: 657 HSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFK 697
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP F+CPLS LM DPV++ SGQTF+R I+KW + G CP+T+ L Q L PN +
Sbjct: 238 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 325 KDLISKW 331
K +I+ W
Sbjct: 298 KAMIASW 304
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 91/180 (50%), Gaps = 3/180 (1%)
Query: 482 ATEETLAILVALSSYAYFISKIVAS-GALASILNMLDSPNGKFQELAIKILHNLSSDVDI 540
A E + A L +LS +I S A+ +++N+L + ++ A L NLS D
Sbjct: 571 AKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDN 630
Query: 541 QSHIAPSEFLPKLVPFLK-DATLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEI 599
++ I ++ + LV L D + + +L N+ R +V G +P + E +++
Sbjct: 631 KARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAVGEGRQAIVREGG-IPLLVETVDL 689
Query: 600 GSEEDQEHAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVYGNDKAKVSALELRRLLRD 659
GS+ +E+A ++LL LC ++C LV+ EG IP LV +S G +AK A +L R+
Sbjct: 690 GSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRN 749
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 172/427 (40%), Gaps = 67/427 (15%)
Query: 256 QTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
+ ++L R + E CP+SL +M DPVVIE+G T++R I KWF GN TCP T L
Sbjct: 279 KDHDLIRGLKVEDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTS 338
Query: 316 QSLTPNTAMKDLISKWC---------MNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTSS 366
L N +++ +I K C ++ +D VP ++ G L + +S
Sbjct: 339 TELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKF---LTS 395
Query: 367 NKIADGSNRTPLWTNVHDIDL-SRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFV 425
I G ++ V +I + ++ + N C K V
Sbjct: 396 ELINGGEEM--IYRAVREIRVQTKTSSFNRSCLVK---------------------AGAV 432
Query: 426 EPLIRFLRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEE 485
PL++ L D R Q +L SK+ +G + + +L L+ A TE
Sbjct: 433 TPLLKLLSSV----DIRIQENAMAGILNL-SKHVTGKSKIAGEGLKILVEILNEGAKTET 487
Query: 486 TL---AILVALSSYAYFISKIVASG--ALASILNML--DSPNGKFQELAIKILHNLSSDV 538
L + L LSS + S+++ A+ ++N++ D + A+ + L
Sbjct: 488 RLYSASALFYLSSVEDY-SRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLLMQS 546
Query: 539 DIQSHIAPSEFLPKLVPFLK----DATLAVSCLVILKNMCNTEHARVCVVETSGCLPSVA 594
D + + +P L+ L+ L CL L + + V+ G +V
Sbjct: 547 DNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKLAVK 606
Query: 595 ELLEIGSEED-----QEHAVAIL--LCLCSQRDQYCKLVMNEGVIPSLVKI---SVYGND 644
L S ED ++H V ++ LCL RD LV N V+ SL + YG
Sbjct: 607 IL---SSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGS 663
Query: 645 KAKVSAL 651
K K SAL
Sbjct: 664 K-KASAL 669
>sp|Q9SFX2|PUB43_ARATH U-box domain-containing protein 43 OS=Arabidopsis thaliana GN=PUB43
PE=2 SV=1
Length = 811
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 213/485 (43%), Gaps = 100/485 (20%)
Query: 254 GAQTNNLSR-----AIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNH---- 304
G+Q++N S+ I E F CPL+ ++M++PV +E+GQTFER I+KWF+E
Sbjct: 9 GSQSDNSSQFEPGIDNIYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQP 68
Query: 305 -TCPKTKMKLVCQSLTPNTAMKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSD 363
+CP T +L L+P+ A+++ I +W + ND + LDI+ SL Y +
Sbjct: 69 LSCPITSKELSITDLSPSIALRNTIEEW-----RARND-ALKLDIARQSL------YLGN 116
Query: 364 TSSNKIADGSNRTPLWTNVHDI-------DLSRL-TEL----NWDCQCKVIEDYETRLEH 411
+N + N + N+ I L RL T++ + + +CK ++ + +E
Sbjct: 117 AETNILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEG 176
Query: 412 DNQVSHSLSSTNFVEPLIRFL-------RDAR-----DLHDSRA--QRIG-----CRLLL 452
D + ++ + V +++FL R+A +L S A ++IG LL+
Sbjct: 177 DEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLV 236
Query: 453 AFVSKNRSGIPY----------------------LNEDLFSLLASFLHSAAATEETLAIL 490
S + +N L LLA L + T+ ++A
Sbjct: 237 GLTSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFY 296
Query: 491 VALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFL 550
+ + + + IVA +S+++++ + + +E A+ L+N+SS + + L
Sbjct: 297 LGVLALNNDVKVIVAQTVGSSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGIL 356
Query: 551 PKLVPFLKD----------ATLAVSCLVILKNMCNT--EHARVCVVETSGCLPS---VAE 595
P P +KD L IL N+ N + +V V L S V
Sbjct: 357 P---PLIKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVEN 413
Query: 596 LLEIGSE---EDQEHAVAILLCLCSQRDQYCKLV---MNEGVIPSLVK-ISVYGNDKAKV 648
LL++ S E Q +A+L+ L S + +V N I SLV+ + ++ ND ++
Sbjct: 414 LLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRL 473
Query: 649 SALEL 653
++++L
Sbjct: 474 ASIKL 478
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP F+CP+SL LM DPV I +GQT++R I W GN TCP T++ L +L PN +
Sbjct: 14 IPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTL 73
Query: 325 KDLISKWCM 333
+ LI +WC+
Sbjct: 74 RRLIQEWCV 82
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 165/373 (44%), Gaps = 40/373 (10%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLV-CQSLTPNTA 323
+P F+CP+SL +M DPV+++SG TF+R+ IQ+W + GN TCP TK+ L L PN A
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 324 MKDLISKWCMNLCSSMNDLHVPLDISNMSLGSLDTSYGSDTS--SNKIADGSNRTPLWTN 381
++ LI +N HV L S+ + S+ + S ++ S+ +
Sbjct: 65 LRSLI----------LNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLES 114
Query: 382 VHDIDLSRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFV--EPLIRFLRDARDLH 439
+ L RLT+ + + KV E R D + S N V E + L +
Sbjct: 115 L--TRLVRLTKRDSSIRRKVTESGAVRAALD-----CVDSCNQVLQEKSLSLLLNLSLED 167
Query: 440 DSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEETLAILVALSSYAYF 499
D++ + ++ V+ R G P D ++ A+ L S A E A + SY
Sbjct: 168 DNKVGLVADGVIRRIVTVLRVGSP----DCKAIAATLLTSLAVVEVNKA---TIGSYPDA 220
Query: 500 ISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSEFLPKLVPFLKD 559
IS +V+ +L N + ++ + L+ L S D + + +P LV D
Sbjct: 221 ISALVS---------LLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVE-AAD 270
Query: 560 ATLAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQEHAVAILLCLCSQR 619
+ L + +L + R + + SG + + +L G+ + ++++ IL CLC
Sbjct: 271 SGLE-RAVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCS 329
Query: 620 DQYCKLVMNEGVI 632
+ V EGV+
Sbjct: 330 GEIVDEVKREGVV 342
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP VF CP+SL M DPV + +GQT+ER+ I KWF G+ TCP T +L ++TPN +
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 325 KDLISKW 331
LI W
Sbjct: 124 HHLIYTW 130
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 41/68 (60%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP F+CP+S LM DPV+I SG T++R I+KWFE G TCP T L PN +
Sbjct: 33 IPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNHTI 92
Query: 325 KDLISKWC 332
+ +I WC
Sbjct: 93 RRMIQGWC 100
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNH-TCPKTKMKLVCQSLTPNTA 323
IP F+CP+SL LM DPV + +GQT++R I+ W GN+ TCP T+ L +L PN
Sbjct: 14 IPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHT 73
Query: 324 MKDLISKWCM 333
++ LI +WC+
Sbjct: 74 LRRLIQEWCV 83
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNH--TCPKTKMKLVCQSLTPNT 322
+P+ FKC LS +M DPV+I SGQT+E+ +I +W NH TCP K L LTPN
Sbjct: 74 VPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL---NHDLTCPTAKQVLYRVCLTPNH 130
Query: 323 AMKDLISKWCM 333
+ +LI++WC+
Sbjct: 131 LINELITRWCL 141
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 256 QTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVC 315
++++L +P FKCP+SL +M PV + +G T++R+ IQ+W ++GN+TCP T L
Sbjct: 2 RSDDLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQN 61
Query: 316 QSLTPNTAMKDLISKW 331
+ PN + LI W
Sbjct: 62 KEFVPNLTLHRLIDHW 77
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 269 FKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKDLI 328
+CP+SL +M DPVV+ESG T++R I KWF GN TCPKT LV L N ++K +I
Sbjct: 282 LRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 329 SKW 331
+
Sbjct: 342 QSY 344
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%)
Query: 261 SRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTP 320
S IP F+CP+S+ LM DPV+I +G T++R+ I+ W GN TCP T L P
Sbjct: 27 SEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIP 86
Query: 321 NTAMKDLISKWCM 333
N ++ +I WC+
Sbjct: 87 NHTIRKMIQGWCV 99
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP VF CP+SL M DPV + +GQT+ER I KWF G+ TCP T +L +TPN +
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 325 KDLISKW 331
LI W
Sbjct: 120 HQLIYTW 126
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
+P+ F C LS +M +PV+I SGQT+E+ +I +W + TCPKTK L + PN +
Sbjct: 72 VPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLI 130
Query: 325 KDLISKWCM 333
DLI++WC+
Sbjct: 131 SDLITQWCL 139
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
+P FKCP+SL +M PV + +G T++R IQ+W + GN+TCP T L + PN +
Sbjct: 12 VPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTL 71
Query: 325 KDLISKW 331
+ LI+ W
Sbjct: 72 QRLINIW 78
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 69.7 bits (169), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEG-NHTCPKTKMKLVCQSLTPNTA 323
IP F CP+SL +M DPV++ +G T++R I+KW G ++CP TK + LTPN
Sbjct: 12 IPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHT 71
Query: 324 MKDLISKWC 332
++ LI WC
Sbjct: 72 LRRLIQSWC 80
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 69.7 bits (169), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEG-NHTCPKTKMKLVCQSLTPNTA 323
IP F CP+SL +M DPV++ +G T++R I+KW G ++CP TK + LTPN
Sbjct: 7 IPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 324 MKDLISKWC 332
++ LI WC
Sbjct: 67 LRRLIQSWC 75
>sp|Q9LM76|PUB44_ARATH U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44
PE=1 SV=1
Length = 801
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 173/395 (43%), Gaps = 72/395 (18%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNH-----TCPKTKMKLVCQSLT 319
I E F CPL+ +M+DPV +E+G+TFER I+KWF+E +CP T +L ++
Sbjct: 23 IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVS 82
Query: 320 PNTAMKDLISKWCMNLCSSMNDLHVPLDISNMS--LGSLDTS-YGSDTSSNKIADGSNRT 376
+ A+++ I +W S ND LDI+ S LG+ +T + +I RT
Sbjct: 83 ASIALRNTIEEW-----RSRND-AAKLDIARQSLFLGNAETDILQALMHVRQIC----RT 132
Query: 377 PLWTNVHDIDLSRLTELNWD--------CQCKVIEDYETRLEHDNQVSHSLSSTNFVEPL 428
+ +N H + S+L + D + K ++ + +E D++ ++ + V L
Sbjct: 133 -IRSNRHGVRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTL 191
Query: 429 IRFLRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEETLA 488
++FL H+ R LL +SK+ + L E + S +H A L
Sbjct: 192 VKFLS-----HEPSKGREAAVSLLFELSKSEA----LCEKIGS-----IHGA------LI 231
Query: 489 ILVALSSYAYFISKIVASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAPSE 548
+LV L+S +S N E A + L N+ +I +A
Sbjct: 232 LLVGLTSS--------------------NSENVSIVEKADRTLENMERSEEIVRQMASYG 271
Query: 549 FLPKLVPFLKDAT--LAVSCLVILKNMCNTEHARVCVVETSGCLPSVAELLEIGSEEDQE 606
L L+ L + + +S L + +V V +T G S+ +L+ G +E
Sbjct: 272 RLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVAQTVGS--SLVDLMRSGDMPQRE 329
Query: 607 HAVAILLCLCSQRDQYCKLVMNEGVIPSLVKISVY 641
A+ L + S + K+++++G++P L+K Y
Sbjct: 330 AALKALNKI-SSFEGSAKVLISKGILPPLIKDLFY 363
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
+P F+CP+SL +M PV + +G T++R IQ+W + GN+TCP T L + PN +
Sbjct: 10 VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTL 69
Query: 325 KDLISKW 331
+ LI W
Sbjct: 70 QRLIEIW 76
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 259 NLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSL 318
++S +P+ F C LS ++M +P++I SGQTFE+ +I +W + TCP+TK L + +
Sbjct: 59 DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFM 117
Query: 319 TPNTAMKDLISKWCM 333
PN + ++I +WC+
Sbjct: 118 IPNHLINEVIKEWCL 132
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 183/427 (42%), Gaps = 76/427 (17%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTP--NTA 323
P+ F CP++ ++ DPV +E+GQT+ER IQ+W GN TCP T+ L S+ P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 324 MKDLISKW---CMNLCSSMNDLHVPL---------DISNMSLGSLDTSYGSDTSSNKIAD 371
+K LI+ W L ++++ P DI +S T + + +
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 372 GSNRTPLWTNVHDIDLSRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFVEPLIRF 431
SNR + + S L++ + ++ Y +S +S N E
Sbjct: 631 RSNRF-MPAAITTSPTSVLSQAAVETIVNSLKPY---------ISSLCTSENLPECEEAV 680
Query: 432 LRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEETLAILV 491
L+ AR L DS+ + +++SK P + L +L SA+ E L +
Sbjct: 681 LKIARLLKDSKTN----PQIHSYLSK-----PTIINGLVEIL-----SASRNREVLRTSI 726
Query: 492 ALSSYAYFISKIV-ASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAP---- 546
Y +S+++ ++A LN +DS F LA + + L+ + + P
Sbjct: 727 ------YILSELIFTDDSVAETLNSVDS---DFDCLATLLKNGLAEAALLIYQLRPVFAQ 777
Query: 547 ---SEFLPKLVPF-------LKDATLAV----SCLVILKN--MCNTEHAR---VCVVETS 587
E +P LV L D L + + + IL+ M E++R V ++
Sbjct: 778 LSAHELIPSLVDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISA 837
Query: 588 GCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCK-LVMNEGVIPSLVKISVYGNDKA 646
+P++ + LE E + V++LLC C Q ++ CK L+ N + ++++ GND
Sbjct: 838 NGIPTLVKYLE--RMEGRRSVVSVLLC-CMQAEKSCKNLIANRIELSPVLELFHSGNDSV 894
Query: 647 KVSALEL 653
+ + +E
Sbjct: 895 RGTCVEF 901
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 183/427 (42%), Gaps = 76/427 (17%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTP--NTA 323
P+ F CP++ ++ DPV +E+GQT+ER IQ+W GN TCP T+ L S+ P N
Sbjct: 512 PKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPL-SASILPKTNYV 570
Query: 324 MKDLISKW---CMNLCSSMNDLHVPL---------DISNMSLGSLDTSYGSDTSSNKIAD 371
+K LI+ W L ++++ P DI +S T + + +
Sbjct: 571 LKRLITSWKEQNPELAQEFSNVNTPRGSSCSPSAKDIPMLSTRQRTTDSPNHKNKDYARQ 630
Query: 372 GSNRTPLWTNVHDIDLSRLTELNWDCQCKVIEDYETRLEHDNQVSHSLSSTNFVEPLIRF 431
SNR + + S L++ + ++ Y +S +S N E
Sbjct: 631 RSNRF-MPAAITTSPTSVLSQAAVETIVNSLKPY---------ISSLCTSENLPECEEAV 680
Query: 432 LRDARDLHDSRAQRIGCRLLLAFVSKNRSGIPYLNEDLFSLLASFLHSAAATEETLAILV 491
L+ AR L DS+ + +++SK P + L +L SA+ E L +
Sbjct: 681 LKIARLLKDSKTN----PQIHSYLSK-----PTIINGLVEIL-----SASRNREVLRTSI 726
Query: 492 ALSSYAYFISKIV-ASGALASILNMLDSPNGKFQELAIKILHNLSSDVDIQSHIAP---- 546
Y +S+++ ++A LN +DS F LA + + L+ + + P
Sbjct: 727 ------YILSELIFTDDSVAETLNSVDS---DFDCLATLLKNGLAEAALLIYQLRPVFAQ 777
Query: 547 ---SEFLPKLVPF-------LKDATLAV----SCLVILKN--MCNTEHAR---VCVVETS 587
E +P LV L D L + + + IL+ M E++R V ++
Sbjct: 778 LSAHELIPSLVDVIQNKNEELDDFQLVIDPKDAAIAILEQTLMGGDEYSRSLNASSVISA 837
Query: 588 GCLPSVAELLEIGSEEDQEHAVAILLCLCSQRDQYCK-LVMNEGVIPSLVKISVYGNDKA 646
+P++ + LE E + V++LLC C Q ++ CK L+ N + ++++ GND
Sbjct: 838 NGIPTLVKYLE--RMEGRRSVVSVLLC-CMQAEKSCKNLIANRIELSPVLELFHSGNDSV 894
Query: 647 KVSALEL 653
+ + +E
Sbjct: 895 RGTCVEF 901
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQS-LTPNTA 323
IP F CP+SL +M DPV SG T++R I KW E+ +CP TK L S LTPN
Sbjct: 10 IPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEK-VPSCPVTKQPLPLDSDLTPNHM 68
Query: 324 MKDLISKWCM 333
++ LI WC+
Sbjct: 69 LRRLIQHWCV 78
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSL-TPNTAM 324
P+ F CP++ ++ DPV +E+GQT+ER IQ+W GN TCP T+ L L N +
Sbjct: 514 PKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALSANILPKTNYVL 573
Query: 325 KDLISKW 331
K LI W
Sbjct: 574 KRLIVSW 580
>sp|Q8GZ84|PUB36_ARATH U-box domain-containing protein 36 OS=Arabidopsis thaliana GN=PUB36
PE=2 SV=2
Length = 435
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMK 325
P+ F CP++ +M DP V G T+E I +WFE G+ T P +L SL PN A++
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 326 DLISKW 331
I +W
Sbjct: 414 SAIQEW 419
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMK 325
P F CP+S +M +P V G T+E +++W + G+ T P T +KL +L PN A++
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 326 DLISKW 331
I +W
Sbjct: 558 SAIQEW 563
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP VF CP+ +M +P V G ++E IQ+W G+ T P T ++L Q LTPN +
Sbjct: 689 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 748
Query: 325 KDLISKW 331
+ LI W
Sbjct: 749 RSLIQDW 755
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 267 EVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMKD 326
E FKCP+S+ +M DP V G T+E +KW G T PKT L +L PN ++
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 327 LISKW 331
+I W
Sbjct: 295 IIKDW 299
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 255 AQTNNLSRAIIPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLV 314
A+ ++LS I P+ F CP++ LM DPV+ G ++ER ++ W + T P T + L
Sbjct: 393 AKMDSLSSGI-PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALP 451
Query: 315 CQSLTPNTAMKDLISKW 331
LTPN +K I++W
Sbjct: 452 SLVLTPNRTLKMAINRW 468
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 266 PEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAMK 325
P+ F CP+SL +M DP + G T+E I W + G+ T P T KL L PN A++
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 326 DLISKW 331
I +W
Sbjct: 386 SAIQEW 391
>sp|Q5FVN8|WSDU1_RAT WD repeat, SAM and U-box domain-containing protein 1 OS=Rattus
norvegicus GN=Wdsub1 PE=2 SV=1
Length = 476
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 265 IPEVFKCPLSLRLMYDPVVIESGQTFERMWIQKWFEEGNHTCPKTKMKLVCQSLTPNTAM 324
IP+ F CP++ LM DPV+ G ++ER ++ W + T P T + L LTPN +
Sbjct: 404 IPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTL 463
Query: 325 KDLISKW 331
K I++W
Sbjct: 464 KMAINRW 470
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 241,328,578
Number of Sequences: 539616
Number of extensions: 9532030
Number of successful extensions: 27031
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 26733
Number of HSP's gapped (non-prelim): 319
length of query: 710
length of database: 191,569,459
effective HSP length: 125
effective length of query: 585
effective length of database: 124,117,459
effective search space: 72608713515
effective search space used: 72608713515
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)