BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036201
(112 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582596|ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
gi|223528250|gb|EEF30303.1| RNA binding motif protein, putative [Ricinus communis]
Length = 181
Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/111 (68%), Positives = 87/111 (78%), Gaps = 18/111 (16%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
+KFGNHRGFAFVEYVTKQEAQNAL+ALS+THLYGRHL V+ERA
Sbjct: 88 VKFGNHRGFAFVEYVTKQEAQNALQALSSTHLYGRHL------------------VLERA 129
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIA 111
KEGESLEELRARTAA F+DE++G N K+SKKRK+M +LDEGTMKF+RIA
Sbjct: 130 KEGESLEELRARTAAHFSDELSGMHNPAKVSKKRKNMAVLDEGTMKFQRIA 180
>gi|297738037|emb|CBI27238.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 151 bits (381), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 86/112 (76%), Gaps = 23/112 (20%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+ALS+THLYGRHL VMERA
Sbjct: 679 MKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHL------------------VMERA 720
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGESLEELRARTAAQFTD QN TKLS+KRKHM LDEGT+KFERIA+
Sbjct: 721 KEGESLEELRARTAAQFTD-----QNPTKLSRKRKHMAALDEGTVKFERIAD 767
>gi|359472780|ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
Length = 983
Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 86/112 (76%), Gaps = 23/112 (20%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+ALS+THLYGRHL VMERA
Sbjct: 895 MKFGSHRGFAFVEFVTKQEAQNALQALSSTHLYGRHL------------------VMERA 936
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGESLEELRARTAAQFTD QN TKLS+KRKHM LDEGT+KFERIA+
Sbjct: 937 KEGESLEELRARTAAQFTD-----QNPTKLSRKRKHMAALDEGTVKFERIAD 983
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 85/112 (75%), Gaps = 18/112 (16%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFGNHRGFAFVEYVT+QEAQNAL+ALS+THLYGRHL V+ERA
Sbjct: 754 MKFGNHRGFAFVEYVTQQEAQNALKALSSTHLYGRHL------------------VIERA 795
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KE ESLEELRARTAAQF+DE NGFQ++ K SKKRK + LDEG MKF R+A+
Sbjct: 796 KEAESLEELRARTAAQFSDEQNGFQSAMKFSKKRKQVDFLDEGKMKFGRMAD 847
>gi|38345802|emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza sativa Japonica Group]
Length = 904
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 814 MKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL------------------VIERA 855
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ +LSKKRK +++DEG++KF RI E
Sbjct: 856 KEGETLEELRARTAAQFVDEQSGFQ---RLSKKRKQTSLVDEGSVKFSRIVE 904
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD----------QIISIIA 51
K G R FAFV + T +EA+ AL+ +NT++ + VA S+
Sbjct: 58 KDGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKK 117
Query: 52 PTFQVMERAKEGESLEELRARTAAQFTDEVNGFQNS 87
P + ++ K G+ L++ + +D+V G + S
Sbjct: 118 PEYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGS 153
>gi|125549686|gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 814 MKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL------------------VIERA 855
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ +LSKKRK +++DEG++KF RI E
Sbjct: 856 KEGETLEELRARTAAQFVDEQSGFQ---RLSKKRKQTSLVDEGSVKFSRIVE 904
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD----------QIISIIA 51
K G R FAFV + T +EA+ AL+ +NT++ + VA S+
Sbjct: 58 KDGKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKK 117
Query: 52 PTFQVMERAKEGESLEELRARTAAQFTDEVNGFQNS 87
P + ++ K G+ L++ + +D+V G + S
Sbjct: 118 PEYNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGS 153
>gi|125591601|gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 777 MKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL------------------VIERA 818
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ +LSKKRK +++DEG++KF RI E
Sbjct: 819 KEGETLEELRARTAAQFVDEQSGFQ---RLSKKRKQTSLVDEGSVKFSRIVE 867
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD----------QIISIIAPT 53
G R FAFV + T +EA+ AL+ +NT++ + VA S+ P
Sbjct: 23 GKSRQFAFVGFRTNEEAEEALKYFNNTYIDTCKITCEVARKIGDPEAPRPWSRHSLKKPE 82
Query: 54 FQVMERAKEGESLEELRARTAAQFTDEVNGFQNS 87
+ ++ K G+ L++ + +D+V G + S
Sbjct: 83 YNSKDKTKTGDVSAPLKSSKGQKVSDDVGGSKGS 116
>gi|357168436|ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 804 MKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL------------------VIERA 845
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ ++SKKRK ++LDEG++KF RI E
Sbjct: 846 KEGETLEELRARTAAQFVDEQSGFQ---RMSKKRKQTSLLDEGSVKFSRIVE 894
>gi|115460478|ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial [Oryza sativa Japonica Group]
Length = 536
Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/112 (63%), Positives = 85/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVE+VTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 446 MKFGSHRGFAFVEFVTKQEAQNALQALASTHLYGRHL------------------VIERA 487
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ +LSKKRK +++DEG++KF RI E
Sbjct: 488 KEGETLEELRARTAAQFVDEQSGFQ---RLSKKRKQTSLVDEGSVKFSRIVE 536
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 18/112 (16%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVEYVT+QEA+NA EAL++THLYGRHL+ +E A
Sbjct: 731 MKFGSHRGFAFVEYVTQQEAKNAREALASTHLYGRHLL------------------IEHA 772
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KE E+LEELRA+TAAQF+DE NGFQ++ KLSKKR + ILDEG MKF R+A+
Sbjct: 773 KEDETLEELRAKTAAQFSDEQNGFQSAMKLSKKRNQVDILDEGNMKFGRMAD 824
>gi|226504376|ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/112 (62%), Positives = 82/112 (73%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVEYVTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 791 MKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHL------------------VIERA 832
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELR RTAAQF DE +GFQ+ LS KRK ++DEG++K RIAE
Sbjct: 833 KEGETLEELRERTAAQFVDESSGFQS---LSSKRKRSILVDEGSVKVSRIAE 881
>gi|242077146|ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/112 (61%), Positives = 84/112 (75%), Gaps = 21/112 (18%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG+HRGFAFVEYVTKQEAQNAL+AL++THLYGRHL V+ERA
Sbjct: 530 MKFGSHRGFAFVEYVTKQEAQNALQALASTHLYGRHL------------------VIERA 571
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
KEGE+LEELRARTAAQF DE +GFQ+ LS+KRK +++D+G++K RI E
Sbjct: 572 KEGETLEELRARTAAQFVDEHSGFQS---LSRKRKQSSLVDDGSVKISRIVE 620
>gi|224072369|ref|XP_002303703.1| predicted protein [Populus trichocarpa]
gi|222841135|gb|EEE78682.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 70/92 (76%), Gaps = 18/92 (19%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFGNHRGFAFVEYVTKQEAQNAL+ALS+THLYGRHL V+ERA
Sbjct: 711 MKFGNHRGFAFVEYVTKQEAQNALQALSSTHLYGRHL------------------VLERA 752
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSK 92
KEGESLEELRARTAAQFTDE NG QN KLSK
Sbjct: 753 KEGESLEELRARTAAQFTDEQNGLQNPAKLSK 784
>gi|449464088|ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 74/109 (67%), Gaps = 23/109 (21%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG HRGFAFVE+VTKQEAQNA +ALSNTHLYGRHL V+ERA
Sbjct: 736 MKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHL------------------VLERA 777
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFER 109
KEGESLEELRARTAAQF+++ + +SKKRK M DE MK +R
Sbjct: 778 KEGESLEELRARTAAQFSNDQDPI-----VSKKRKQMADFDEDRMKLQR 821
>gi|449505035|ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 74/109 (67%), Gaps = 23/109 (21%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
MKFG HRGFAFVE+VTKQEAQNA +ALSNTHLYGRHL V+ERA
Sbjct: 739 MKFGKHRGFAFVEFVTKQEAQNAFQALSNTHLYGRHL------------------VLERA 780
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFER 109
KEGESLEELRARTAAQF+++ + +SKKRK M DE MK +R
Sbjct: 781 KEGESLEELRARTAAQFSNDQDPI-----VSKKRKQMADFDEDRMKLQR 824
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 71/109 (65%), Gaps = 23/109 (21%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
GNHRGFAFVE++TK+EAQNA EAL NTHLYGRH+ V+ERAKEG
Sbjct: 793 GNHRGFAFVEFLTKKEAQNAFEALQNTHLYGRHM------------------VLERAKEG 834
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFERIAE 112
ESLEELRARTA+QF+ E N N + +K+RK +D+ M F R E
Sbjct: 835 ESLEELRARTASQFS-EAN---NDGRAAKRRKQAE-MDDSQMSFGRFTE 878
>gi|294460856|gb|ADE76001.1| unknown [Picea sitchensis]
Length = 181
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%), Gaps = 21/97 (21%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
+HRGFAF+E+VTKQEA+NA ALS++HLYGRHL V+E+A+E E
Sbjct: 106 SHRGFAFIEFVTKQEAENAFNALSSSHLYGRHL------------------VLEQAREDE 147
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILD 101
SL ELRAR A++F D+ + S SK+RK M +D
Sbjct: 148 SLTELRARIASKFVDDNDITLGS---SKRRKGMPYVD 181
>gi|302810024|ref|XP_002986704.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
gi|300145592|gb|EFJ12267.1| hypothetical protein SELMODRAFT_182522 [Selaginella moellendorffii]
Length = 730
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 18/73 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
GNHRGFAFVE+VTKQEAQNA EAL ++HLYGRHL V+E A+EG
Sbjct: 663 GNHRGFAFVEFVTKQEAQNAFEALGSSHLYGRHL------------------VLEWAREG 704
Query: 64 ESLEELRARTAAQ 76
E+L+ELR + A+Q
Sbjct: 705 ETLDELRIKAASQ 717
>gi|302818104|ref|XP_002990726.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
gi|300141464|gb|EFJ08175.1| hypothetical protein SELMODRAFT_185536 [Selaginella moellendorffii]
Length = 738
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 50/73 (68%), Gaps = 18/73 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
GNHRGFAFVE+VTKQEAQNA EAL ++HLYGRHL V+E A+EG
Sbjct: 671 GNHRGFAFVEFVTKQEAQNAFEALGSSHLYGRHL------------------VLEWAREG 712
Query: 64 ESLEELRARTAAQ 76
E+L+ELR + A+Q
Sbjct: 713 ETLDELRIKAASQ 725
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 18/74 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+HRGFAFVE+VTKQEA+NALE L+ THLYGR L V+E A+E
Sbjct: 689 GSHRGFAFVEFVTKQEAKNALEGLAGTHLYGRRL------------------VVEYARED 730
Query: 64 ESLEELRARTAAQF 77
++L+++R +TAA+F
Sbjct: 731 DTLDDIRNKTAAKF 744
>gi|328865472|gb|EGG13858.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 868
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 35/42 (83%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G HRGF FVEY+T+QEA+NA+EAL N+HLYGRHLI S A +
Sbjct: 799 GGHRGFGFVEYLTEQEAKNAMEALQNSHLYGRHLILSFAEED 840
>gi|384245230|gb|EIE18725.1| hypothetical protein COCSUDRAFT_20380 [Coccomyxa subellipsoidea
C-169]
Length = 876
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 19/98 (19%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+HRGFAFV+++TKQEA++A EA++ THLYGR L V+E A+
Sbjct: 797 GSHRGFAFVDFLTKQEAKSAAEAVAGTHLYGRRL------------------VVEWAEAD 838
Query: 64 ES-LEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTIL 100
E+ L+ELRA+TAA+F + + + K+RK++ +
Sbjct: 839 EAGLDELRAKTAARFRPDEDAAGDQHPAKKQRKNLDFV 876
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/80 (48%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
GNHRGFAFVE TK+EA +ALEAL THLYGR L V+ERA EG
Sbjct: 849 GNHRGFAFVELSTKREATSALEALRGTHLYGRKL------------------VIERAAEG 890
Query: 64 ESLEELRARTAAQFTDEVNG 83
+ +E R +TAA F + G
Sbjct: 891 DDVETTREKTAAHFENAEAG 910
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 18/80 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAF+E++TK+EA+ A E+L TH YGRHL V+E A E
Sbjct: 1100 GQHRGFAFIEFLTKEEAKKAFESLKATHFYGRHL------------------VLEWAAED 1141
Query: 64 ESLEELRARTAAQFTDEVNG 83
S+E++R +TAA+F N
Sbjct: 1142 ASVEQMREKTAARFKSMTNA 1161
>gi|328773827|gb|EGF83864.1| hypothetical protein BATDEDRAFT_8977, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 873
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 28/102 (27%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAFV+++TKQEA+ A + L THLYGRHL V+E A++
Sbjct: 798 GQHRGFAFVDFLTKQEAKTAYDTLGATHLYGRHL------------------VLEWAQDD 839
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTM 105
ES+E +R++T +N K S K++ + + DE M
Sbjct: 840 ESVEAVRSKT----------IRNFVKTSTKKQRVEMDDEDDM 871
>gi|297804178|ref|XP_002869973.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315809|gb|EFH46232.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 788
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 53/95 (55%), Gaps = 25/95 (26%)
Query: 8 GFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESLE 67
GFAFVE+VTKQEA NA +ALS+TH YGRHL V+E A + S+E
Sbjct: 714 GFAFVEFVTKQEALNAKKALSSTHFYGRHL------------------VLEWANDDNSME 755
Query: 68 ELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+R R+AA+ +E + +KKRK +DE
Sbjct: 756 AIRKRSAAKLDEENDN-------AKKRKSSKAVDE 783
>gi|301103392|ref|XP_002900782.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262101537|gb|EEY59589.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 758
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 23/104 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAFVE++T+QEA+NA AL+++HLYGRHL V+E A++
Sbjct: 678 GRHRGFAFVEFLTEQEARNAFSALASSHLYGRHL------------------VLEWAEDA 719
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKF 107
+ ++ LRA+ T +V +S + K+ K DE M F
Sbjct: 720 DDIDTLRAKA----TRDVTAINDSER-RKRMKRQKDEDEDDMDF 758
>gi|4582489|emb|CAB40378.1| putative protein [Arabidopsis thaliana]
gi|7268757|emb|CAB78963.1| putative protein [Arabidopsis thaliana]
Length = 772
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 18/78 (23%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G + G+AFVE+VTKQEA NA +AL++TH YGRHL V+E A +
Sbjct: 694 IGQYAGYAFVEFVTKQEALNAKKALASTHFYGRHL------------------VLEWAND 735
Query: 63 GESLEELRARTAAQFTDE 80
S+E +R R+AA+F +E
Sbjct: 736 DNSMEAIRKRSAAKFDEE 753
>gi|186512055|ref|NP_193696.3| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
gi|332658804|gb|AEE84204.1| nucleotide/nucleic acid binding protein [Arabidopsis thaliana]
Length = 816
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 19/90 (21%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G + G+AFVE+VTKQEA NA +AL++TH YGRHL+ A+D
Sbjct: 738 IGQYAGYAFVEFVTKQEALNAKKALASTHFYGRHLVLEWANDD----------------- 780
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSK 92
S+E +R R+AA+F DE N K SK
Sbjct: 781 -NSMEAIRKRSAAKF-DEENDNARKRKSSK 808
>gi|348686579|gb|EGZ26394.1| hypothetical protein PHYSODRAFT_484800 [Phytophthora sojae]
Length = 768
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G HRGFAFVE++T+QEA+NA AL+++HLYGRHL+ A D
Sbjct: 688 GRHRGFAFVEFLTEQEARNAFSALASSHLYGRHLVLEWAED 728
>gi|281201992|gb|EFA76199.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 874
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGF FV+Y+T+QEA+NA++AL N+HLYGRHL+ A
Sbjct: 814 GGHRGFGFVQYLTEQEAKNAMDALRNSHLYGRHLVLEFA 852
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++GFAFVEY TKQEA NA+ AL N+H YGRHLI A D
Sbjct: 653 GQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYAKD 693
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++GFAFVEY TKQEA NA+ AL N+H YGRHLI A D
Sbjct: 641 GQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYAKD 681
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++GFAFVEY TKQEA NA+ AL N+H YGRHLI A D
Sbjct: 641 GQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYAKD 681
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++GFAFVEY TKQEA NA+ AL N+H YGRHLI A D
Sbjct: 653 GQNKGFAFVEYATKQEAANAMAALKNSHFYGRHLIIEYAKD 693
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 41/70 (58%), Gaps = 18/70 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAF+E+ TKQEA++A ALS THLYGR L ME A++
Sbjct: 1043 GTHRGFAFIEFSTKQEARDAFSALSGTHLYGRRL------------------AMEFAEDD 1084
Query: 64 ESLEELRART 73
ESLE LR +T
Sbjct: 1085 ESLETLRQKT 1094
>gi|193624932|ref|XP_001949363.1| PREDICTED: probable RNA-binding protein 19-like [Acyrthosiphon
pisum]
Length = 831
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGFAFVEY +K EA+ A+E++ +THLYGR L V+E A+
Sbjct: 750 GTHRGFAFVEYNSKTEAKAAMESMCQSTHLYGRRL------------------VLEWAQA 791
Query: 63 GESLEELRARTAAQF 77
GE+L+E+R RTA Q+
Sbjct: 792 GENLDEMRKRTADQY 806
>gi|401399856|ref|XP_003880652.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
gi|325115063|emb|CBZ50619.1| probable RNA-binding protein 19, related [Neospora caninum Liverpool]
Length = 1099
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G RGFAFV++ TKQEAQNA++ALS +HLYGR L+ A+ + +S
Sbjct: 1050 GRSRGFAFVDFATKQEAQNAVDALSGSHLYGRRLVLEPANQEHVS 1094
>gi|66809481|ref|XP_638463.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996868|sp|Q54PB2.1|MRD1_DICDI RecName: Full=Multiple RNA-binding domain-containing protein 1;
AltName: Full=RNA-binding motif protein 19 homolog;
AltName: Full=RNA-binding protein 19 homolog
gi|60467060|gb|EAL65101.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 895
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 32/39 (82%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGF FVE++T++EA+NA+EAL N+H YGRHL+ A
Sbjct: 832 GGHRGFGFVEFLTEEEAKNAMEALGNSHFYGRHLVLQYA 870
>gi|307111065|gb|EFN59300.1| hypothetical protein CHLNCDRAFT_7238, partial [Chlorella
variabilis]
Length = 556
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 18/70 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAFV++ TKQEA+NA+EA+ HLYGR L V+E A+E
Sbjct: 505 GTHRGFAFVDFATKQEARNAMEAVQGAHLYGRRL------------------VLEWAEEE 546
Query: 64 ESLEELRART 73
L+ELRA+T
Sbjct: 547 GGLDELRAKT 556
>gi|443723982|gb|ELU12200.1| hypothetical protein CAPTEDRAFT_225018 [Capitella teleta]
Length = 891
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 26/100 (26%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGFAFV++++K++AQ A +AL +THLYGR L V+E A
Sbjct: 807 GQHRGFAFVDFLSKEDAQRAFDALCHSTHLYGRRL------------------VLEWADP 848
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
ES++ELR +TA+++ D S KK K ++++E
Sbjct: 849 DESVDELRMKTASRYAD-------SDSPHKKLKKASLMNE 881
>gi|387196381|gb|AFJ68758.1| rna binding motif protein 19 [Nannochloropsis gaditana CCMP526]
Length = 291
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G+HRGFAFVE++T QEA NA ALS+THLYG+ L+ A D+
Sbjct: 203 GSHRGFAFVEFLTAQEANNAFVALSSTHLYGKRLVLEWAEDK 244
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 54/99 (54%), Gaps = 22/99 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G HRGFAFV+++T QEA A ++L +TH YGRHL V E A++G
Sbjct: 793 GGHRGFAFVDFLTAQEAMGAKKSLESTHFYGRHL------------------VGEWAEDG 834
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
E ++ LRA+ A ++ G N + +K++K + D+
Sbjct: 835 EDMDTLRAKAAR----DLRGPSNGGRPAKRQKAASSGDD 869
>gi|224000233|ref|XP_002289789.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
gi|220974997|gb|EED93326.1| potential RNA bindin g protein [Thalassiosira pseudonana CCMP1335]
Length = 886
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G HRGF F E++T++EAQNA+ LS THLYGRHL+ A ++
Sbjct: 801 GTHRGFGFCEFLTRKEAQNAMATLSRTHLYGRHLVLEWASNE 842
>gi|449477354|ref|XP_002196178.2| PREDICTED: probable RNA-binding protein 19 [Taeniopygia guttata]
Length = 944
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 29/100 (29%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV++VTKQ+A+ A +AL +THLYGR L V+E A
Sbjct: 857 GSHRGFGFVDFVTKQDAKKAFQALCHSTHLYGRRL------------------VLEWADT 898
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
E+LE LR +TA F D KK+K IL+E
Sbjct: 899 EETLEALRRKTAQHFHDS----------PKKKKRSEILNE 928
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 19/80 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVA-HDQIISIIAPTFQVMERAKEG 63
HRGF FV+++TK +A+ A +ALS +THLYGR L+ A HD +
Sbjct: 828 HRGFGFVDFITKADAKRAFDALSASTHLYGRRLVLEWASHD-----------------DQ 870
Query: 64 ESLEELRARTAAQFTDEVNG 83
LEELR RTAA+F D G
Sbjct: 871 NDLEELRKRTAARFDDTQTG 890
>gi|440789720|gb|ELR11019.1| RNA binding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 838
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G RGFAFV+++TKQEA+NA ++L +THLYGRHL+ + S
Sbjct: 782 GRARGFAFVDFITKQEAKNAFQSLQDTHLYGRHLVLEFVQNSTAS 826
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGF FVE++T++EA+NA+EAL ++H YGRHL+ A
Sbjct: 817 GGHRGFGFVEFLTEEEAKNAMEALGSSHFYGRHLVLQYA 855
>gi|13548328|emb|CAC35875.1| putative protein [Arabidopsis thaliana]
Length = 768
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 8 GFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESLE 67
G+AFVE+ T QEA NA +ALSNTH YGRHL V+E A++ ES+E
Sbjct: 689 GYAFVEFGTMQEALNAKKALSNTHFYGRHL------------------VLEWARDDESME 730
Query: 68 ELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEG 103
++ AA++ G +N KKRK T++ G
Sbjct: 731 AIQKSCAAKYM----GQENDN--PKKRKSSTVVGSG 760
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 19/80 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVA-HDQIISIIAPTFQVMERAKEG 63
HRGF FV+++TK +A+ A +ALS +THLYGR L+ A HD +
Sbjct: 827 HRGFGFVDFITKADAKRAFDALSASTHLYGRRLVLEWASHD-----------------DQ 869
Query: 64 ESLEELRARTAAQFTDEVNG 83
LEELR RTAA+F D G
Sbjct: 870 NDLEELRKRTAARFDDTQAG 889
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMER 59
KF N RGFAF E+VT +EA+NA+EALSNTHL GR L+ A + + A Q ME+
Sbjct: 673 KFDNSARGFAFAEFVTPKEAENAMEALSNTHLLGRRLVLDFAEGEAVDPEA-EIQAMEK 730
>gi|237841019|ref|XP_002369807.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
gi|211967471|gb|EEB02667.1| RNA recognition motif-containing protein [Toxoplasma gondii ME49]
Length = 997
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G RGF FV++ TKQEAQNA+EAL+ +HLYGR L+ A + +S
Sbjct: 948 GRSRGFGFVDFATKQEAQNAVEALTGSHLYGRRLVLEPAQLEQVS 992
>gi|221483682|gb|EEE21994.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 997
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G RGF FV++ TKQEAQNA+EAL+ +HLYGR L+ A + +S
Sbjct: 948 GRSRGFGFVDFATKQEAQNAVEALTGSHLYGRRLVLEPAQLEQVS 992
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 28/101 (27%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGFAFV+++TKQEA+ A EAL +THLYGR L+ A E
Sbjct: 686 GSHRGFAFVDFLTKQEAKKAFEALCHSTHLYGRRLVLEWAD-----------------AE 728
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEG 103
+S+E LR +TA F + V K+RK M +E
Sbjct: 729 EDSVEGLRKKTATHFHENV----------KRRKGMDDFEEA 759
>gi|21064855|gb|AAM29657.1| SD14970p [Drosophila melanogaster]
Length = 918
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 21/91 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 827 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DNQ 870
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EELR RTAA+F +G Q +T + RK
Sbjct: 871 DVEELRKRTAAKF----DGSQAATAAKRSRK 897
>gi|195326391|ref|XP_002029912.1| GM25167 [Drosophila sechellia]
gi|194118855|gb|EDW40898.1| GM25167 [Drosophila sechellia]
Length = 917
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 21/91 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 826 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DNQ 869
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EELR RTAA+F +G Q +T + RK
Sbjct: 870 DVEELRKRTAAKF----DGSQAATAAKRSRK 896
>gi|24661759|ref|NP_648337.1| CG3335 [Drosophila melanogaster]
gi|7294907|gb|AAF50237.1| CG3335 [Drosophila melanogaster]
Length = 918
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 21/91 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 827 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DNQ 870
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EELR RTAA+F +G Q +T + RK
Sbjct: 871 DVEELRKRTAAKF----DGSQAATAAKRSRK 897
>gi|195589101|ref|XP_002084294.1| GD14198 [Drosophila simulans]
gi|194196303|gb|EDX09879.1| GD14198 [Drosophila simulans]
Length = 778
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 21/91 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 687 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DNQ 730
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EELR RTAA+F +G Q +T + RK
Sbjct: 731 DVEELRKRTAAKF----DGSQAATAAKRSRK 757
>gi|325185984|emb|CCA20488.1| RNAbinding protein putative [Albugo laibachii Nc14]
Length = 754
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
G HRGFAFVE++T+QEA++A +L +HLYGRHL+ A ++ S+
Sbjct: 680 GRHRGFAFVEFMTEQEAKDAFNSLCKSHLYGRHLVLEWAEEEENSV 725
>gi|332024948|gb|EGI65135.1| Putative RNA-binding protein 19 [Acromyrmex echinatior]
Length = 862
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 48/91 (52%), Gaps = 24/91 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAF+EY TK +A+ A +AL +THLYGR L V+E A+ E
Sbjct: 779 HRGFAFIEYYTKSDAKKAFKALCQSTHLYGRRL------------------VLEWAQTEE 820
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE+R RT F E NSTK KK K
Sbjct: 821 GIEEIRKRTVKHFYQE-----NSTKQFKKSK 846
>gi|340055425|emb|CCC49744.1| putative RNA-binding protein, fragment, partial [Trypanosoma vivax
Y486]
Length = 853
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++T+QEA+ A E+L THLYGRHL+ A
Sbjct: 812 NHRGFAFVEFLTEQEARRARESLGATHLYGRHLVIQYA 849
>gi|194768695|ref|XP_001966447.1| GF22183 [Drosophila ananassae]
gi|190617211|gb|EDV32735.1| GF22183 [Drosophila ananassae]
Length = 939
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 17/74 (22%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FV+Y+ K EA+ A EA+S +THLYGR L+ + + +G
Sbjct: 846 SHRGFGFVDYMNKAEAKRAFEAISASTHLYGRRLVLEWSAND----------------DG 889
Query: 64 ESLEELRARTAAQF 77
+ +EELR RTAA+F
Sbjct: 890 QDVEELRKRTAAKF 903
>gi|189235137|ref|XP_001807432.1| PREDICTED: similar to RBD protein [Tribolium castaneum]
gi|270003801|gb|EFA00249.1| hypothetical protein TcasGA2_TC003078 [Tribolium castaneum]
Length = 840
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGFAFV++V +A+NA EAL +THLYGR L V+E A
Sbjct: 768 GSHRGFAFVDFVAASDAKNAFEALCQSTHLYGRRL------------------VLEWASS 809
Query: 63 GESLEELRARTAAQF 77
+S++++R RTAA F
Sbjct: 810 EDSVDDIRKRTAAHF 824
>gi|397643662|gb|EJK76002.1| hypothetical protein THAOC_02254 [Thalassiosira oceanica]
Length = 869
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGFAF E+VT +EA+NA+ +LS THLYGR L+ A
Sbjct: 791 GTHRGFAFCEFVTSKEARNAMTSLSQTHLYGRRLVLEWA 829
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEAL-SNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGFAFV+++TKQ+A+ A EAL ++THLYGR L+ A D+
Sbjct: 800 GPHRGFAFVDFLTKQDAKRAFEALCTSTHLYGRRLVLEWAEDE----------------- 842
Query: 63 GESLEELRARTAAQF 77
+ ++ LR RTA F
Sbjct: 843 -DDVDTLRKRTADHF 856
>gi|407393203|gb|EKF26533.1| hypothetical protein MOQ_009766 [Trypanosoma cruzi marinkellei]
Length = 878
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE+++++EA+ ALE L THLYGRHL+ A
Sbjct: 836 NHRGFAFVEFLSEEEAKRALETLKATHLYGRHLVLQYA 873
>gi|71423762|ref|XP_812563.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877357|gb|EAN90712.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 879
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE+++++EA+ ALE L THLYGRHL+ A
Sbjct: 837 NHRGFAFVEFLSEEEAKRALETLKATHLYGRHLVLQYA 874
>gi|407835043|gb|EKF99127.1| hypothetical protein TCSYLVIO_009959 [Trypanosoma cruzi]
Length = 871
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE+++++EA+ ALE L THLYGRHL+ A
Sbjct: 829 NHRGFAFVEFLSEEEAKRALETLKATHLYGRHLVLQYA 866
>gi|71652574|ref|XP_814940.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879958|gb|EAN93089.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 878
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE+++++EA+ ALE L THLYGRHL+ A
Sbjct: 836 NHRGFAFVEFLSEEEAKRALETLKATHLYGRHLVLQYA 873
>gi|405963583|gb|EKC29145.1| Putative RNA-binding protein 19 [Crassostrea gigas]
Length = 878
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++T+Q+A+ A +AL +THLYGR L V+E A+
Sbjct: 818 GSHRGFGFVDFLTRQDAKRAFDALCHSTHLYGRRL------------------VLEWAES 859
Query: 63 GESLEELRARTAAQFTD 79
E L++LR +TA F D
Sbjct: 860 AEDLDQLRKKTAEHFHD 876
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 28/39 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGFAFVE+ T QEA+NA AL NTH YGR L+ A
Sbjct: 338 GQHRGFAFVEFTTTQEAKNAFTALENTHFYGRKLVIEWA 376
>gi|384483751|gb|EIE75931.1| hypothetical protein RO3G_00635 [Rhizopus delemar RA 99-880]
Length = 831
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G HRGFAF++++TKQEA+N + + N HLYGRHL+ A +
Sbjct: 770 GGHRGFAFLDFLTKQEAKNVYDNMGNIHLYGRHLVLEWAQE 810
>gi|341892788|gb|EGT48723.1| CBN-RBD-1 protein [Caenorhabditis brenneri]
Length = 876
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 23/88 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++++ EA+ A +AL +THLYGR L V+E AKE E
Sbjct: 793 HRGFGFVDFISADEARRAFDALVHSTHLYGRRL------------------VLEWAKEDE 834
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSK 92
++EELR +TA +F+ G + TK SK
Sbjct: 835 TVEELREKTAEKFS----GNKKGTKKSK 858
>gi|322787083|gb|EFZ13307.1| hypothetical protein SINV_16564 [Solenopsis invicta]
Length = 859
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 42/76 (55%), Gaps = 19/76 (25%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAF+EY TK +A+ A EAL +THLYGR L V+E A+ E
Sbjct: 776 HRGFAFIEYYTKTDAKKAFEALCQSTHLYGRRL------------------VLEWAQAEE 817
Query: 65 SLEELRARTAAQFTDE 80
+EE+R RTA F E
Sbjct: 818 GIEEIRRRTAKHFYQE 833
>gi|345490259|ref|XP_001605134.2| PREDICTED: probable RNA-binding protein 19-like [Nasonia
vitripennis]
Length = 904
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 28/104 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FVE+ TK+EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 822 HRGFGFVEFYTKKEAKRAFKALCQSTHLYGRRL------------------VLEWAQTDE 863
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFE 108
+E+LR RTA F +++ S KR + LD ++ E
Sbjct: 864 GVEDLRKRTAKHFHEDI---------SAKRSKKSTLDPESIGLE 898
>gi|47226530|emb|CAG08546.1| unnamed protein product [Tetraodon nigroviridis]
Length = 944
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
GNHRGF F+++VTKQ+A+ A +AL +THLYGR L V+E A
Sbjct: 886 GNHRGFGFIDFVTKQDAKKAFDALCHSTHLYGRRL------------------VLEWADA 927
Query: 63 GESLEELRARTAAQF 77
E++E LR +TA F
Sbjct: 928 EETVEALRRKTAEHF 942
>gi|340721943|ref|XP_003399372.1| PREDICTED: probable RNA-binding protein 19-like [Bombus terrestris]
Length = 901
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFVEY TK EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 821 HRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRL------------------VLEWAQTEE 862
Query: 65 SLEELRARTAAQF 77
+EE+R RTA F
Sbjct: 863 GVEEVRKRTAKHF 875
>gi|291232095|ref|XP_002735981.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Saccoglossus kowalevskii]
Length = 861
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 18/79 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A +
Sbjct: 776 GTHRGFGFVDFLTKQDAKRAFSALCHSTHLYGRRLVLEWAD-----------------TD 818
Query: 63 GESLEELRARTAAQFTDEV 81
+S++ LR +TAA F D++
Sbjct: 819 SDSVDALRKKTAAHFHDDL 837
>gi|350407885|ref|XP_003488228.1| PREDICTED: probable RNA-binding protein 19-like [Bombus impatiens]
Length = 900
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFVEY TK EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 820 HRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRL------------------VLEWAQTEE 861
Query: 65 SLEELRARTAAQF 77
+EE+R RTA F
Sbjct: 862 GVEEVRKRTAKHF 874
>gi|390354769|ref|XP_003728404.1| PREDICTED: probable RNA-binding protein 19-like [Strongylocentrotus
purpuratus]
Length = 384
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 21/97 (21%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV++++KQ+A+ A ++L ++HLYGR L V+E A+
Sbjct: 303 GSHRGFGFVDFLSKQDAKRAFDSLCHSSHLYGRRL------------------VLEWAES 344
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTI 99
+S+E+LR +TA F+D N K S H+T+
Sbjct: 345 EQSVEQLRKKTADHFSDGSNN--KKLKKSDLTDHLTL 379
>gi|326930082|ref|XP_003211181.1| PREDICTED: probable RNA-binding protein 19-like [Meleagris
gallopavo]
Length = 746
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 659 GSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRL------------------VLEWADT 700
Query: 63 GESLEELRARTAAQFTD 79
E++E LR RTA F D
Sbjct: 701 EETVEALRRRTADHFHD 717
>gi|226533389|ref|NP_001034357.2| RNA binding motif protein 19 [Gallus gallus]
Length = 957
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 870 GSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRL------------------VLEWADT 911
Query: 63 GESLEELRARTAAQFTD 79
E++E LR RTA F D
Sbjct: 912 EETVEALRRRTADHFHD 928
>gi|328791232|ref|XP_624611.3| PREDICTED: probable RNA-binding protein 19-like [Apis mellifera]
Length = 889
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFVEY TK EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 811 HRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRL------------------VLEWAQTEE 852
Query: 65 SLEELRARTAAQF 77
+E++R RTA F
Sbjct: 853 GVEDIRKRTAKHF 865
>gi|60098573|emb|CAH65117.1| hypothetical protein RCJMB04_3n1 [Gallus gallus]
Length = 621
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 534 GSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRL------------------VLEWADT 575
Query: 63 GESLEELRARTAAQFTD 79
E++E LR RTA F D
Sbjct: 576 EETVEALRRRTADHFHD 592
>gi|380018594|ref|XP_003693212.1| PREDICTED: probable RNA-binding protein 19-like [Apis florea]
Length = 900
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFVEY TK EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 822 HRGFAFVEYYTKSEAKKAFKALCQSTHLYGRRL------------------VLEWAQTEE 863
Query: 65 SLEELRARTAAQF 77
+E++R RTA F
Sbjct: 864 GVEDIRKRTAKHF 876
>gi|164661195|ref|XP_001731720.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
gi|159105621|gb|EDP44506.1| hypothetical protein MGL_0988 [Malassezia globosa CBS 7966]
Length = 824
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGFAFVE+V+++EA+NA+ AL +THL GRHL+ A D
Sbjct: 723 GRTRGFAFVEFVSRREAENAMAALRHTHLLGRHLVLEWAGD 763
>gi|307192625|gb|EFN75799.1| Probable RNA-binding protein 19 [Harpegnathos saltator]
Length = 863
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAK 61
F HRGFAF+EY TK++A+ A +L +THLYGR L V+E A+
Sbjct: 781 FEKHRGFAFIEYHTKEDAKRAFTSLCQSTHLYGRRL------------------VLEWAQ 822
Query: 62 EGESLEELRARTAAQF 77
E+LEE+R RTA +F
Sbjct: 823 AEENLEEIRKRTAERF 838
>gi|194868033|ref|XP_001972201.1| GG15393 [Drosophila erecta]
gi|190653984|gb|EDV51227.1| GG15393 [Drosophila erecta]
Length = 917
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 17/73 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 826 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DSQ 869
Query: 65 SLEELRARTAAQF 77
+EELR RTAA+F
Sbjct: 870 DVEELRKRTAAKF 882
>gi|342182689|emb|CCC92168.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 861
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
NHRGFAFVE++T++EA+ A + L +THLYGRHL+ A
Sbjct: 819 NHRGFAFVEFLTEEEARRAKQTLGSTHLYGRHLVLQYAQ 857
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++++ EA ALE L +THLYGRHL+ A
Sbjct: 902 NHRGFAFVEFLSEVEAARALETLKSTHLYGRHLVLQYA 939
>gi|302676924|ref|XP_003028145.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
gi|300101833|gb|EFI93242.1| hypothetical protein SCHCODRAFT_60180 [Schizophyllum commune H4-8]
Length = 743
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 43/74 (58%), Gaps = 19/74 (25%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE-S 65
RGFAF+++VT+QEA+NA+ AL +THL GRHL V+E A+EGE
Sbjct: 663 RGFAFLDFVTRQEAENAMAALRHTHLLGRHL------------------VLEWAEEGEQD 704
Query: 66 LEELRARTAAQFTD 79
+E LR + F D
Sbjct: 705 IEALRKKAGVGFGD 718
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++++ EA ALE L THLYGRHL+ A
Sbjct: 778 NHRGFAFVEFLSEAEAARALETLKATHLYGRHLVLQYA 815
>gi|412990000|emb|CCO20642.1| predicted protein [Bathycoccus prasinos]
Length = 992
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA-HDQIISIIAPTFQVMERAKE 62
G+HRGFAF+EY T++EA +A++AL N HLYGR + A D+ ++ + + A
Sbjct: 904 GSHRGFAFIEYTTQREATDAMDALGNAHLYGRKCVIERADEDETVNTMDDSN--TNAAVF 961
Query: 63 GES-LEELRARTAAQFTDEVNGFQNSTK 89
GES +E+LR + Q +N Q S+K
Sbjct: 962 GESNVEKLREKAKRQIDGGLN--QRSSK 987
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 26/94 (27%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE-S 65
RGFAF+E+VT+QEA+NA AL +THL GRHL V+E A+EG+
Sbjct: 698 RGFAFLEFVTRQEAENAYNALKHTHLLGRHL------------------VLEWAEEGDMD 739
Query: 66 LEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTI 99
+EELR + GF +L +++ + I
Sbjct: 740 VEELRKKAGV-------GFGEGKELPGRKRKIVI 766
>gi|357616005|gb|EHJ69949.1| hypothetical protein KGM_10362 [Danaus plexippus]
Length = 888
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 16/85 (18%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFV+Y +K +A++A +AL +THLYGR L+ A +++ E E
Sbjct: 806 HRGFAFVDYYSKADAKSAFDALCQSTHLYGRRLVLEWA---------------DQSDENE 850
Query: 65 SLEELRARTAAQFTDEVNGFQNSTK 89
++ LR RTA +F + G + S K
Sbjct: 851 DIDLLRKRTAEKFNAKSPGGKKSRK 875
>gi|157865391|ref|XP_001681403.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68124699|emb|CAJ02743.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 950
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++++ EA ALE L THLYGRHL+ A
Sbjct: 909 NHRGFAFVEFLSEAEAARALETLKATHLYGRHLVLQYA 946
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 21/92 (22%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FV+Y TK +A+ A +ALS +THLYGR L+ A ++ +
Sbjct: 828 SHRGFCFVDYTTKADAKRAFDALSASTHLYGRRLVLEWASNE----------------DQ 871
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+ +EELR RTA +F +G Q + + + R+
Sbjct: 872 QDVEELRKRTAIKF----DGSQAAVEAKRSRR 899
>gi|146079207|ref|XP_001463723.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134067810|emb|CAM66090.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 954
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++++ EA ALE L THLYGRHL+ A
Sbjct: 913 NHRGFAFVEFLSEAEAARALETLKATHLYGRHLVLQYA 950
>gi|398011431|ref|XP_003858911.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497122|emb|CBZ32193.1| hypothetical protein, conserved [Leishmania donovani]
Length = 952
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++++ EA ALE L THLYGRHL+ A
Sbjct: 911 NHRGFAFVEFLSEAEAARALETLKATHLYGRHLVLQYA 948
>gi|195490760|ref|XP_002093276.1| GE20857 [Drosophila yakuba]
gi|194179377|gb|EDW92988.1| GE20857 [Drosophila yakuba]
Length = 919
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 17/73 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y++K EA+ A +ALS +THLYGR L+ + + + +
Sbjct: 828 HRGFGFVDYMSKAEAKRAFDALSASTHLYGRRLVLEWSAND----------------DNQ 871
Query: 65 SLEELRARTAAQF 77
+EELR RTAA+F
Sbjct: 872 DVEELRKRTAAKF 884
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 19/76 (25%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGFAF++++TKQ+A+ A E+LS +THLYGR L V+E A
Sbjct: 768 SHRGFAFIDFITKQDAKRAFESLSASTHLYGRRL------------------VLEWAASE 809
Query: 64 ESLEELRARTAAQFTD 79
+++E++R RT + +T+
Sbjct: 810 DTVEDVRRRTTSHYTE 825
>gi|301779826|ref|XP_002925333.1| PREDICTED: probable RNA-binding protein 19-like [Ailuropoda
melanoleuca]
Length = 963
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A +AL +THLYGR L+ A ++
Sbjct: 852 GTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEV---------------- 895
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL+ LR +TA +F + K+K +LDE
Sbjct: 896 --SLQTLRRKTAERFHE-----------PPKKKRSVVLDE 922
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRQKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|281343470|gb|EFB19054.1| hypothetical protein PANDA_014807 [Ailuropoda melanoleuca]
Length = 947
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A +AL +THLYGR L+ A ++
Sbjct: 858 GTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEV---------------- 901
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL+ LR +TA +F + K+K +LDE
Sbjct: 902 --SLQTLRRKTAERFHE-----------PPKKKRSVVLDE 928
>gi|261330461|emb|CBH13445.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 857
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++T++EA+ A + L +THLYGRHL+ A
Sbjct: 815 NHRGFAFVEFLTEEEARRAKQTLGSTHLYGRHLVIQYA 852
>gi|72392895|ref|XP_847248.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176082|gb|AAX70201.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803278|gb|AAZ13182.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 857
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NHRGFAFVE++T++EA+ A + L +THLYGRHL+ A
Sbjct: 815 NHRGFAFVEFLTEEEARRAKQTLGSTHLYGRHLVIQYA 852
>gi|297693058|ref|XP_002823848.1| PREDICTED: probable RNA-binding protein 19 [Pongo abelii]
Length = 999
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 910 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 953
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 954 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 980
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
G HRGFAFVE+ T++E Q A++AL THLYGRH+I
Sbjct: 806 GAHRGFAFVEFNTRRETQAAMDALRGTHLYGRHIII 841
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 688 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 731
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 732 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 758
>gi|402887773|ref|XP_003907256.1| PREDICTED: probable RNA-binding protein 19 [Papio anubis]
Length = 998
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 909 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 952
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 953 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 979
>gi|397525018|ref|XP_003832476.1| PREDICTED: probable RNA-binding protein 19 [Pan paniscus]
Length = 961
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 872 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 915
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 916 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 942
>gi|114647138|ref|XP_522578.2| PREDICTED: probable RNA-binding protein 19 [Pan troglodytes]
gi|410216396|gb|JAA05417.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410216398|gb|JAA05418.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263956|gb|JAA19944.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410263958|gb|JAA19945.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292596|gb|JAA24898.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410292598|gb|JAA24899.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339181|gb|JAA38537.1| RNA binding motif protein 19 [Pan troglodytes]
gi|410339183|gb|JAA38538.1| RNA binding motif protein 19 [Pan troglodytes]
Length = 961
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 872 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 915
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 916 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 942
>gi|390468249|ref|XP_002753088.2| PREDICTED: probable RNA-binding protein 19 [Callithrix jacchus]
Length = 1066
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 977 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 1020
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 1021 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 1047
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 884 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 927
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 928 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 954
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 24/98 (24%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSN-THLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FVEY T ++A++A E+L++ THLYGR L V+E A+
Sbjct: 788 SHRGFCFVEYSTTEDARSAFESLADSTHLYGRRL------------------VLEWAEGD 829
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILD 101
++++++RA+TA +F G + KK K +TI D
Sbjct: 830 DTVDDIRAKTALRFYKGEEGPEK-----KKSKRITISD 862
>gi|332250675|ref|XP_003274476.1| PREDICTED: probable RNA-binding protein 19 [Nomascus leucogenys]
Length = 997
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 908 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 951
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 952 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 978
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|109098882|ref|XP_001106082.1| PREDICTED: probable RNA-binding protein 19 [Macaca mulatta]
Length = 998
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 909 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 952
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 953 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 979
>gi|355564713|gb|EHH21213.1| hypothetical protein EGK_04225 [Macaca mulatta]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|328852591|gb|EGG01736.1| hypothetical protein MELLADRAFT_23270 [Melampsora larici-populina
98AG31]
Length = 510
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 17/69 (24%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGF F+EY TK+EA+ A+++L +THL GRHL+ S A+D+ E +
Sbjct: 459 RGFGFIEYTTKKEAEEAMKSLKHTHLLGRHLVISYANDK-----------------DEDI 501
Query: 67 EELRARTAA 75
E+LRA++
Sbjct: 502 EQLRAKSGG 510
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|380818506|gb|AFE81126.1| putative RNA-binding protein 19 [Macaca mulatta]
gi|383412169|gb|AFH29298.1| putative RNA-binding protein 19 [Macaca mulatta]
Length = 960
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|355786561|gb|EHH66744.1| hypothetical protein EGM_03792 [Macaca fascicularis]
Length = 960
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|297807131|ref|XP_002871449.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317286|gb|EFH47708.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 745
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 29/100 (29%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G + GF FVE+ T QEA NA +A SNTH YGR L+ AHD
Sbjct: 667 GKYAGFGFVEFGTMQEALNAKKAFSNTHFYGRQLVLEWAHD------------------- 707
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEG 103
+ R AA++ D+ N KKRK T++ G
Sbjct: 708 ----DKRKSCAAKYMDQENDN------PKKRKRWTVVGRG 737
>gi|429329749|gb|AFZ81508.1| hypothetical protein BEWA_009200 [Babesia equi]
Length = 687
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGFAFV+++TKQEA +A+EAL ++H YGRHL+ A +
Sbjct: 646 HRGFAFVDFMTKQEAIHAMEALQHSHFYGRHLVLEFAEQE 685
>gi|399216364|emb|CCF73052.1| unnamed protein product [Babesia microti strain RI]
Length = 717
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH----DQIISIIAPTFQVMERA 60
++RGFAFVE+ +K +A NALEAL +THLYGRHLI A DQ T ++++A
Sbjct: 654 SNRGFAFVEFESKSDAVNALEALQHTHLYGRHLILDFAQPTQFDQDCQETNSTTNIVDKA 713
Query: 61 K 61
K
Sbjct: 714 K 714
>gi|307180956|gb|EFN68744.1| Probable RNA-binding protein 19 [Camponotus floridanus]
Length = 903
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 21/86 (24%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF F+EY TK +A+ A +AL +THLYGR L V+E A+ E
Sbjct: 821 HRGFGFIEYYTKTDAKKAFKALCQSTHLYGRRL------------------VLEWAQAEE 862
Query: 65 SLEELRARTAAQFTDEVNG--FQNST 88
+EE+R RTA +F E + F+ ST
Sbjct: 863 GIEEIRKRTAKRFYQESSTKRFKKST 888
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 19/89 (21%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++ TK +A+ A +ALS +THLYGR L+ A ++ + +
Sbjct: 826 HRGFGFVDFTTKADAKRAFDALSASTHLYGRRLVLEWASNE----------------DQQ 869
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKK 93
++ELR RTAA+F + N N K S++
Sbjct: 870 DVDELRKRTAAKF--DGNQMANEAKRSRR 896
>gi|308450796|ref|XP_003088431.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
gi|308247287|gb|EFO91239.1| hypothetical protein CRE_22247 [Caenorhabditis remanei]
Length = 901
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++++ EA+ A +AL +THLYGR L V+E AKE E
Sbjct: 818 HRGFGFVDFISADEARRAFDALVHSTHLYGRRL------------------VLEWAKEDE 859
Query: 65 SLEELRARTAAQF 77
++EELR +TA +F
Sbjct: 860 TVEELREKTAEKF 872
>gi|308491929|ref|XP_003108155.1| CRE-RBD-1 protein [Caenorhabditis remanei]
gi|308249003|gb|EFO92955.1| CRE-RBD-1 protein [Caenorhabditis remanei]
Length = 888
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++++ EA+ A +AL +THLYGR L V+E AKE E
Sbjct: 805 HRGFGFVDFISADEARRAFDALVHSTHLYGRRL------------------VLEWAKEDE 846
Query: 65 SLEELRARTAAQF 77
++EELR +TA +F
Sbjct: 847 TVEELREKTAEKF 859
>gi|157104329|ref|XP_001648356.1| RNA binding motif protein [Aedes aegypti]
gi|108880340|gb|EAT44565.1| AAEL004075-PA [Aedes aegypti]
Length = 860
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 23/92 (25%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FV++VT+ +A+ A EAL +THLYGR L V+E A+
Sbjct: 762 SHRGFCFVDFVTENDAKQAFEALCQSTHLYGRRL------------------VLEWAEAD 803
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+ +EELR RTA +F G S+ + RK
Sbjct: 804 DGVEELRKRTAEKFA----GTSGSSDAKRSRK 831
>gi|345790896|ref|XP_543410.3| PREDICTED: probable RNA-binding protein 19 [Canis lupus familiaris]
Length = 970
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A +AL +THLYGR L+ A ++
Sbjct: 873 GTHRGFGFVDFLTKQDAKRAFQALCHSTHLYGRRLVLEWADSEV---------------- 916
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL+ LR +TA F + K+K +LDE
Sbjct: 917 --SLQALRRKTAEHFHE-----------PPKKKRSVVLDE 943
>gi|345308678|ref|XP_001519607.2| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Ornithorhynchus anatinus]
Length = 454
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/34 (67%), Positives = 30/34 (88%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
HRGFAFVE+++K+EA +A+E L N+HLYGRHLI
Sbjct: 408 HRGFAFVEFMSKKEAIHAIEMLQNSHLYGRHLIL 441
>gi|403281594|ref|XP_003932266.1| PREDICTED: probable RNA-binding protein 19 [Saimiri boliviensis
boliviensis]
Length = 960
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 871 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADTEV---------------- 914
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TAA F + K+K +LDE
Sbjct: 915 --TLQALRRKTAAHFHE-----------PPKKKRSVVLDE 941
>gi|327282636|ref|XP_003226048.1| PREDICTED: probable RNA-binding protein 19-like isoform 2 [Anolis
carolinensis]
Length = 938
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 28/106 (26%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A L +THLYGR L V+E A
Sbjct: 851 GTHRGFGFVDFLTKQDAKQAFNTLCHSTHLYGRRL------------------VLEWADT 892
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFE 108
E++E LR +TA F D KK+K +L+E K E
Sbjct: 893 EETVEALRRKTAEHFHDSA---------PKKKKRSAVLEEILDKLE 929
>gi|410923148|ref|XP_003975044.1| PREDICTED: probable RNA-binding protein 19-like [Takifugu rubripes]
Length = 941
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
GNHRGF F+++VTK +A+ A +AL +THLYGR L V+E A
Sbjct: 857 GNHRGFGFIDFVTKHDAKKAFDALCHSTHLYGRRL------------------VLEWADA 898
Query: 63 GESLEELRARTAAQF 77
E++E LR +TA F
Sbjct: 899 EETVEALRRKTADHF 913
>gi|327282634|ref|XP_003226047.1| PREDICTED: probable RNA-binding protein 19-like isoform 1 [Anolis
carolinensis]
Length = 945
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 28/106 (26%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A L +THLYGR L V+E A
Sbjct: 858 GTHRGFGFVDFLTKQDAKQAFNTLCHSTHLYGRRL------------------VLEWADT 899
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFE 108
E++E LR +TA F D KK+K +L+E K E
Sbjct: 900 EETVEALRRKTAEHFHDSA---------PKKKKRSAVLEEILDKLE 936
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 23/92 (25%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FV++VT+ +A+ A EAL +THLYGR L V+E A+
Sbjct: 165 SHRGFCFVDFVTENDAKQAFEALCQSTHLYGRRL------------------VLEWAEAD 206
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+ +EELR RTA +F G S+ + RK
Sbjct: 207 DGVEELRKRTAEKFA----GTSGSSDAKRSRK 234
>gi|70946045|ref|XP_742777.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521947|emb|CAH81719.1| hypothetical protein PC000778.04.0 [Plasmodium chabaudi chabaudi]
Length = 244
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
+ RG+ FVE+++K E A+ AL +THLYGRHLI A+D I F M+ ++
Sbjct: 141 YNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLIIDFANDLIFDQNVDEFDKMKESQN 200
Query: 63 G 63
G
Sbjct: 201 G 201
>gi|71012413|ref|XP_758493.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
gi|74702789|sp|Q4PC17.1|MRD1_USTMA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46098151|gb|EAK83384.1| hypothetical protein UM02346.1 [Ustilago maydis 521]
Length = 858
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
KF N RGF FVEY T +EAQ+A+EAL +THL GRHL+ +H
Sbjct: 753 KFDNTTRGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQWSH 795
>gi|409042979|gb|EKM52462.1| hypothetical protein PHACADRAFT_126290 [Phanerochaete carnosa
HHB-10118-sp]
Length = 767
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 27/98 (27%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGES- 65
RGFAF+E++T+ EA+NA AL +THL GRHL V+E A+E S
Sbjct: 687 RGFAFLEFITRHEAENAYAALRHTHLLGRHL------------------VLEWAEEDSSV 728
Query: 66 -LEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+EELR + GF +L K++ + ++DE
Sbjct: 729 DIEELRKKAGV-------GFGGGKELPGKKRKLEMVDE 759
>gi|432874359|ref|XP_004072458.1| PREDICTED: probable RNA-binding protein 19-like [Oryzias latipes]
Length = 921
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
GNHRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 837 GNHRGFGFVDFITKQDAKKAFAALCHSTHLYGRRL------------------VLEWADA 878
Query: 63 GESLEELRARTAAQF 77
E++E LR +TA +
Sbjct: 879 EETVEALRRKTAEHY 893
>gi|294944087|ref|XP_002784080.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
gi|239897114|gb|EER15876.1| RNA-binding domain protein, putative [Perkinsus marinus ATCC 50983]
Length = 849
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
HRGFAFVE+V++ EA A+EAL +THLYGR L+ A + SI
Sbjct: 772 GHRGFAFVEFVSRSEALAAMEALQHTHLYGRRLVLEPAAHEDTSI 816
>gi|49619013|gb|AAT68091.1| KIAA0682-like [Danio rerio]
Length = 927
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF F++++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 843 GSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRL------------------VLEWADA 884
Query: 63 GESLEELRARTAAQFTD 79
E++++LR +TA F D
Sbjct: 885 EETVDDLRRKTAQHFHD 901
>gi|38707995|ref|NP_944597.1| probable RNA-binding protein 19 [Danio rerio]
gi|32450902|gb|AAP82506.1| nil per os [Danio rerio]
Length = 926
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF F++++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 842 GSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRL------------------VLEWADA 883
Query: 63 GESLEELRARTAAQFTD 79
E++++LR +TA F D
Sbjct: 884 EETVDDLRRKTAQHFHD 900
>gi|429859384|gb|ELA34169.1| pre-rRNA processing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 866
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
KFGN RGFAF E+VT +EA+NAL AL +THL GR L+
Sbjct: 776 KFGNSTRGFAFAEFVTPREAENALNALRDTHLLGRKLVL 814
>gi|190337757|gb|AAI63877.1| RNA binding motif protein 19 [Danio rerio]
Length = 926
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF F++++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 842 GSHRGFGFIDFLTKQDAKKAFSALCHSTHLYGRRL------------------VLEWADA 883
Query: 63 GESLEELRARTAAQFTD 79
E++++LR +TA F D
Sbjct: 884 EETVDDLRRKTAQHFHD 900
>gi|310790005|gb|EFQ25538.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 846
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
KFGN RGFAF E+VT +EA+NAL AL +THL GR L+
Sbjct: 755 KFGNSTRGFAFAEFVTPREAENALNALRDTHLLGRRLVL 793
>gi|343427578|emb|CBQ71105.1| probable RNA-binding protein [Sporisorium reilianum SRZ2]
Length = 866
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
KF N RGF FVEY T +EAQ A EAL +THL GRHL+ +H
Sbjct: 762 KFDNSTRGFGFVEYTTVREAQAAFEALKHTHLLGRHLVLQWSH 804
>gi|148228969|ref|NP_001088073.1| RNA binding motif protein 19 [Xenopus laevis]
gi|52354760|gb|AAH82875.1| LOC494769 protein [Xenopus laevis]
Length = 920
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV++VTKQ+A+ A AL +THLYGR L V+E A+
Sbjct: 836 GSHRGFGFVDFVTKQDAKRAFSALCHSTHLYGRRL------------------VLEWAET 877
Query: 63 GESLEELRARTAAQF 77
+S+E LR +TA +
Sbjct: 878 EDSVETLRRKTAEHY 892
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
G HRGFAFVE+ T +E Q A++AL THLYGRH++
Sbjct: 837 GAHRGFAFVEFNTARETQAAMDALKGTHLYGRHVVL 872
>gi|417405465|gb|JAA49443.1| Putative rna-binding protein rrm superfamily [Desmodus rotundus]
Length = 968
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 870 GSHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 913
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TA +F + K+K +LDE
Sbjct: 914 --TLQALRRKTAERFHE-----------PPKKKRSVVLDE 940
>gi|426247328|ref|XP_004017438.1| PREDICTED: probable RNA-binding protein 19 [Ovis aries]
Length = 916
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 827 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 870
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL+ LR +TA F + K+K +LDE
Sbjct: 871 --SLQALRRKTAEHFHE-----------PPKKKRSVVLDE 897
>gi|195042706|ref|XP_001991484.1| GH12037 [Drosophila grimshawi]
gi|193901242|gb|EDW00109.1| GH12037 [Drosophila grimshawi]
Length = 918
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 17/73 (23%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+Y TK +A+ A +ALS +THLYGR L+ A ++
Sbjct: 830 HRGFGFVDYTTKADAKRAFDALSASTHLYGRRLVLEWAS----------------VEDQH 873
Query: 65 SLEELRARTAAQF 77
++ELR RTAA+F
Sbjct: 874 DVDELRKRTAAKF 886
>gi|195439120|ref|XP_002067479.1| GK16446 [Drosophila willistoni]
gi|194163564|gb|EDW78465.1| GK16446 [Drosophila willistoni]
Length = 929
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 19/89 (21%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++VTK +A+ A +ALS +THLYGR L+ A + E +
Sbjct: 834 HRGFGFVDFVTKADAKRAFDALSASTHLYGRRLVLEWATHE----------------EHD 877
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKK 93
+EELR RTA +F + N + K S++
Sbjct: 878 DVEELRKRTAIKF--DANQMATNAKRSRR 904
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
N+RGFAFVEY +KQE+ A+E+L ++HLYGRHL+ A +
Sbjct: 656 NNRGFAFVEYSSKQESARAVESLQHSHLYGRHLVLEFAEE 695
>gi|389586278|dbj|GAB69007.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 1121
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMER--- 59
+ RG+AFVE+++K E A+E+L +THLYGRHLI A D I F ++
Sbjct: 1016 YNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFIFDQNVNEFDKLKEEGV 1075
Query: 60 -----AKEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMT 98
+K+ + + +A+ A + E +N SKKRK M
Sbjct: 1076 NNNHGSKKQKCITSEQAKRKATYEKEK---KNQVTESKKRKLMN 1116
>gi|221061355|ref|XP_002262247.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811397|emb|CAQ42125.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 1049
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVME 58
+ RG+AFVE+++K E A+E+L +THLYGRHLI A D I F M+
Sbjct: 944 YNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFIFDKNVNEFDKMK 999
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 29/104 (27%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 858 GPHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL------------------VLEWADT 899
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTMK 106
E+++ LR +TA F D +K++ ++D+ T+K
Sbjct: 900 EETVQALRRKTAQHFHDP----------GQKKQSXNLIDDLTVK 933
>gi|440906208|gb|ELR56498.1| Putative RNA-binding protein 19 [Bos grunniens mutus]
Length = 947
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 858 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 901
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL LR +TA F + K+K +LDE
Sbjct: 902 --SLPALRRKTAEHFHE-----------PPKKKRSVVLDE 928
>gi|410976696|ref|XP_003994750.1| PREDICTED: probable RNA-binding protein 19 [Felis catus]
Length = 994
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 863 GSHRGFGFVDFLTKQDAKRAFHALCHSTHLYGRRLVLEWADSEV---------------- 906
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL LR +TA +F + K+K +LDE
Sbjct: 907 --SLPALRRKTAERFHE-----------PPKKKRSVMLDE 933
>gi|242013547|ref|XP_002427466.1| RNA binding motif protein, putative [Pediculus humanus corporis]
gi|212511852|gb|EEB14728.1| RNA binding motif protein, putative [Pediculus humanus corporis]
Length = 846
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FVEY T Q+A+ A +LS +THLYGR L V+E A
Sbjct: 786 GSHRGFCFVEYNTVQDAKRAFNSLSQSTHLYGRRL------------------VLEWAAV 827
Query: 63 GESLEELRARTAAQF 77
+ +E LR +TA QF
Sbjct: 828 DDDIENLRIKTAEQF 842
>gi|17542530|ref|NP_502432.1| Protein RBD-1 [Caenorhabditis elegans]
gi|3880097|emb|CAB05631.1| Protein RBD-1 [Caenorhabditis elegans]
Length = 872
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 19/83 (22%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV++++ EA A ++L +THLYGR L V+E AK+ E
Sbjct: 789 HRGFGFVDFISADEAHRAFDSLVHSTHLYGRRL------------------VLEWAKDDE 830
Query: 65 SLEELRARTAAQFTDEVNGFQNS 87
++EELR +TA +F G + S
Sbjct: 831 TVEELREKTAEKFAGNKKGVKKS 853
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
KF N RGFAFVEY T +EAQ A+EAL +THL GRHL+
Sbjct: 771 KFDNSTRGFAFVEYTTVREAQAAMEALKHTHLLGRHLVL 809
>gi|383847362|ref|XP_003699323.1| PREDICTED: probable RNA-binding protein 19-like [Megachile
rotundata]
Length = 886
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 27/98 (27%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FVEY TK EA+ A +AL +THLYGR L V+E A+ E
Sbjct: 808 HRGFGFVEYYTKGEAKKAFKALGQSTHLYGRRL------------------VLEWAQTEE 849
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+E++R RTA F E SKK K T+ E
Sbjct: 850 GIEDIRKRTAKHFHQE--------DYSKKSKKATLNPE 879
>gi|402217030|gb|EJT97112.1| hypothetical protein DACRYDRAFT_72431 [Dacryopinax sp. DJM-731 SS1]
Length = 766
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 25/96 (26%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGFAF+E+V+++EA+N + AL +THL GRHL+ A D+ + +
Sbjct: 689 RGFAFLEFVSRKEAENVMAALKHTHLLGRHLVLDWADDE------------------QGM 730
Query: 67 EELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+ LR RT F D ++ KR+ + I ++
Sbjct: 731 DNLRERTKRAFGD-------GKEVPTKRRKLNIAED 759
>gi|390596289|gb|EIN05691.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 779
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 34/45 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIA 51
RGFAF+++V++ EA+NA EAL +THL GRHL+ A ++ + + A
Sbjct: 700 RGFAFLDFVSRHEAENAYEALKHTHLLGRHLVLEWASEEDVDVEA 744
>gi|449666027|ref|XP_002162990.2| PREDICTED: probable RNA-binding protein 19-like [Hydra
magnipapillata]
Length = 914
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHD 44
G HRGFAF+++ TKQ+A+ A +AL +THLYGR L+ A D
Sbjct: 829 GTHRGFAFIDFTTKQDAKRAFKALCQSTHLYGRRLVLEWADD 870
>gi|114051910|ref|NP_001039420.1| probable RNA-binding protein 19 [Bos taurus]
gi|88954099|gb|AAI14030.1| RNA binding motif protein 19 [Bos taurus]
Length = 920
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 831 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 874
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
SL LR +TA F + K+K +LDE
Sbjct: 875 --SLPALRRKTAEHFHE-----------PPKKKRSVVLDE 901
>gi|312374833|gb|EFR22311.1| hypothetical protein AND_15450 [Anopheles darlingi]
Length = 867
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 25/92 (27%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FVE+V + +A+ A E L +THLYGR L V+E A
Sbjct: 761 SHRGFGFVEFVREPDAKRAFETLGRSTHLYGRRL------------------VLEWAAPD 802
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKKRK 95
+ +EELR RTA QF Q+ST + RK
Sbjct: 803 DGVEELRKRTAQQFG------QSSTAAKRNRK 828
>gi|261188230|ref|XP_002620531.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239593278|gb|EEQ75859.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis
SLH14081]
gi|239609317|gb|EEQ86304.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ER-3]
gi|327354414|gb|EGE83271.1| pre-rRNA processing protein Mrd1 [Ajellomyces dermatitidis ATCC
18188]
Length = 825
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
G RGFAF ++V+ +EA+NA++AL NTHL GR L+ A ++ I
Sbjct: 739 GTARGFAFADFVSAREAENAMDALKNTHLLGRRLVLDFASEEAI 782
>gi|449268059|gb|EMC78930.1| putative RNA-binding protein 19, partial [Columba livia]
Length = 922
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 865 GSHRGFGFVDFLTKQDAKKAFNALCHSTHLYGRRL------------------VLEWADT 906
Query: 63 GESLEELRARTAAQF 77
E++E LR +TA F
Sbjct: 907 EETVEALRRKTADHF 921
>gi|194214277|ref|XP_001492007.2| PREDICTED: probable RNA-binding protein 19 [Equus caballus]
Length = 962
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 873 GSHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 916
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TA F + K+K +LDE
Sbjct: 917 --TLQALRRKTAEHFHE-----------PPKKKRSVVLDE 943
>gi|156103151|ref|XP_001617268.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148806142|gb|EDL47541.1| RNA binding protein, putative [Plasmodium vivax]
Length = 1127
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
+ RG+AFVE+++K E A+E+L +THLYGRHLI A D I
Sbjct: 1022 YNRSRGYAFVEFMSKNECLTAIESLQHTHLYGRHLIIDFADDFI 1065
>gi|395833986|ref|XP_003789998.1| PREDICTED: probable RNA-binding protein 19 [Otolemur garnettii]
Length = 959
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 870 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 913
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TA F + K+K +LDE
Sbjct: 914 --TLQTLRRKTAEHFHE-----------PPKKKRSVVLDE 940
>gi|428175786|gb|EKX44674.1| hypothetical protein GUITHDRAFT_109452 [Guillardia theta CCMP2712]
Length = 895
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 18/75 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+HRGFAF E+VT QEA A +AL THLYGRHL V+E A+E
Sbjct: 787 GSHRGFAFAEFVTHQEAAAAKDALGATHLYGRHL------------------VIEWAEEE 828
Query: 64 ESLEELRARTAAQFT 78
+SLE +R +TA F+
Sbjct: 829 QSLEAVRRKTARYFS 843
>gi|348528569|ref|XP_003451789.1| PREDICTED: probable RNA-binding protein 19 [Oreochromis niloticus]
Length = 926
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G+HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 842 GSHRGFGFVDFLTKQDAKKAFAALCHSTHLYGRRL------------------VLEWADA 883
Query: 63 GESLEELRARTAAQF 77
E++E LR +TA F
Sbjct: 884 EETVEALRRKTAEHF 898
>gi|354466972|ref|XP_003495945.1| PREDICTED: probable RNA-binding protein 19 [Cricetulus griseus]
gi|344237019|gb|EGV93122.1| putative RNA-binding protein 19 [Cricetulus griseus]
Length = 954
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMER 59
G HRGF FV++VTKQ+A+ A AL +THLYGR L+ A ++ T Q + R
Sbjct: 864 GAHRGFGFVDFVTKQDAKKAFNALCHSTHLYGRRLVLEWADSEV------TLQALRR 914
>gi|440636620|gb|ELR06539.1| hypothetical protein GMDG_02173 [Geomyces destructans 20631-21]
Length = 841
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 2 KFGN-HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
KF N RGFAF E+VT +EA+NA+EAL +THL GR L+ A + +
Sbjct: 753 KFDNTARGFAFAEFVTAREAENAIEALKDTHLLGRRLVIEFAAEDAV 799
>gi|213511062|ref|NP_001133976.1| probable RNA-binding protein 19 [Salmo salar]
gi|209156026|gb|ACI34245.1| Probable RNA-binding protein 19 [Salmo salar]
Length = 912
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 30/103 (29%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 828 GPHRGFGFVDFLTKQDAKKAFSALCHSTHLYGRRL------------------VLEWADA 869
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEGTM 105
+++E LR +TA F D + KK++ ++ EG M
Sbjct: 870 EDTVETLRRKTAEHFHD----------IPKKKRKAEVM-EGIM 901
>gi|432094975|gb|ELK26383.1| Putative RNA-binding protein 19 [Myotis davidii]
Length = 966
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 877 GAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 920
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TA F + K+K +LDE
Sbjct: 921 --TLQALRRKTAEHFHE-----------PPKKKQSVVLDE 947
>gi|427792715|gb|JAA61809.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 841
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 22/99 (22%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FVE++TK +A+ A EAL +THLYGR L+ A + +
Sbjct: 751 GRHRGFGFVEFLTKNDAKRAFEALCQSTHLYGRRLVLEWA-----------------STD 793
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILD 101
+ ++ LR +TA F + G +S +L KK M LD
Sbjct: 794 DQEVDTLRKKTADHF---LRGGPSSKRL-KKSDLMATLD 828
>gi|406865361|gb|EKD18403.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 820
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++T +EA+NALEAL +THL GR L+ A D +
Sbjct: 736 RGFAFANFITAREAENALEALKDTHLLGRRLVLEFAADDAV 776
>gi|19112391|ref|NP_595599.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|48474243|sp|O13620.1|MRD1_SCHPO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|2257512|dbj|BAA21408.1| hypothetical protein YPR112c [Schizosaccharomyces pombe]
gi|13810221|emb|CAC37370.1| RNA-binding protein Mrd1 (predicted) [Schizosaccharomyces pombe]
Length = 833
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF E+VT +EA NA+ AL NTHL GRHL+ A
Sbjct: 761 RGFAFAEFVTAREAANAMRALKNTHLLGRHLVLQYA 796
>gi|268537328|ref|XP_002633800.1| C. briggsae CBR-RBD-1 protein [Caenorhabditis briggsae]
Length = 877
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 19/73 (26%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FVE+++ EA A ++L +THLYGR L V+E AKE E
Sbjct: 794 HRGFGFVEFISTDEAFRAFDSLVHSTHLYGRRL------------------VLEWAKEDE 835
Query: 65 SLEELRARTAAQF 77
++EELR +TA +F
Sbjct: 836 TVEELREKTAEKF 848
>gi|154296406|ref|XP_001548634.1| hypothetical protein BC1G_13029 [Botryotinia fuckeliana B05.10]
gi|347839105|emb|CCD53677.1| similar to multiple RNA-binding domain-containing protein 1
[Botryotinia fuckeliana]
Length = 838
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF +++T +EA+NALEAL +THL GR L+ A ++ +
Sbjct: 755 RGFAFADFITAREAENALEALKDTHLLGRRLVIDFASEETV 795
>gi|156054690|ref|XP_001593271.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980]
gi|154703973|gb|EDO03712.1| hypothetical protein SS1G_06193 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 842
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF +++T +EA+NALEAL +THL GR L+ A ++ +
Sbjct: 759 RGFAFADFITAREAENALEALKDTHLLGRRLVIDFASEETV 799
>gi|159163840|pdb|2CPH|A Chain A, Solution Structure Of The C-Terminal Rna Recognition Motif
Of Hypothetical Rna-Binding Protein Rbm19
Length = 107
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPT 53
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++ P+
Sbjct: 55 GAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEVTVQSGPS 105
>gi|124805915|ref|XP_001350574.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23496698|gb|AAN36254.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 1119
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
+ RG+AF+E+++K+E+ NA+E+L +THLYGRHLI A D F + E
Sbjct: 1019 YNRSRGYAFIEFMSKKESCNAIESLQHTHLYGRHLIIDFADD---------FMFDKNVDE 1069
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMT 98
+ L+EL + + S S+K K ++
Sbjct: 1070 YDKLKELNNQQNKDIITSEQAKRKSIYESQKSKQVS 1105
>gi|291407017|ref|XP_002719829.1| PREDICTED: RBD (RNA binding domain) protein family member
(rbd-1)-like [Oryctolagus cuniculus]
Length = 1025
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++ T Q + R K
Sbjct: 845 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV------TLQALRR-KT 897
Query: 63 GESLEELRARTAAQFTDEV 81
E E + + DE+
Sbjct: 898 AEHFHEPPQKKRSVVLDEI 916
>gi|444723045|gb|ELW63710.1| putative RNA-binding protein 19 [Tupaia chinensis]
Length = 143
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 19/77 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 52 GTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL------------------VLEWADA 93
Query: 63 GESLEELRARTAAQFTD 79
+L+ LR +TA F D
Sbjct: 94 EVTLQALRRKTAEHFHD 110
>gi|431914230|gb|ELK15488.1| Putative RNA-binding protein 19 [Pteropus alecto]
Length = 949
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 19/81 (23%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV++++KQ+A+ A AL +THLYGR L+ A ++
Sbjct: 873 GTHRGFGFVDFLSKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 916
Query: 63 GESLEELRARTAAQFTDEVNG 83
SL+ LR +TA F + G
Sbjct: 917 --SLQALRRKTAEHFHGKTGG 935
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 30/100 (30%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV++ TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 878 GTHRGFGFVDFFTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV---------------- 921
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+L+ LR +TA F + K+K +LDE
Sbjct: 922 --TLQALRRKTAEHFHE-----------PPKKKRSVVLDE 948
>gi|118375162|ref|XP_001020766.1| probable RNA-binding protein [Tetrahymena thermophila]
gi|89302533|gb|EAS00521.1| probable RNA-binding protein [Tetrahymena thermophila SB210]
Length = 718
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGFAF E+ + +EA+NA AL NTHLYGR L A
Sbjct: 677 GQHRGFAFAEFSSAEEAKNAFTALENTHLYGRKLAIEWA 715
>gi|260834035|ref|XP_002612017.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
gi|229297390|gb|EEN68026.1| hypothetical protein BRAFLDRAFT_124790 [Branchiostoma floridae]
Length = 843
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 21/82 (25%)
Query: 2 KFGN--HRGFAFVEYVTKQEAQNALEAL-SNTHLYGRHLIFSVAHDQIISIIAPTFQVME 58
KFG HRGF FVE+++KQ+A+ A AL +THLYGR L+ A Q
Sbjct: 758 KFGGTQHRGFGFVEFLSKQDAKRAFNALVHSTHLYGRRLVLEWADTQ------------- 804
Query: 59 RAKEGESLEELRARTAAQFTDE 80
E+++ELR +TA + +E
Sbjct: 805 -----ETVDELRKKTAEHYHNE 821
>gi|115388597|ref|XP_001211804.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
gi|114195888|gb|EAU37588.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
terreus NIH2624]
Length = 812
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE-GES 65
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ I P ++ + K+ GE
Sbjct: 730 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAID---PEQEIQQIEKKVGEQ 786
Query: 66 LEELR 70
L+ +R
Sbjct: 787 LDRVR 791
>gi|380490988|emb|CCF35636.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 856
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
KFGN RGFAF E+V +EA+NAL AL +THL GR L+
Sbjct: 765 KFGNTTRGFAFAEFVAPREAENALNALRDTHLLGRRLVL 803
>gi|392585482|gb|EIW74821.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 834
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 23/96 (23%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGFAF+E++T+QEA+NA AL +THL GRHL+ A + + +
Sbjct: 753 RGFAFLEFLTRQEAENAYAALRHTHLLGRHLVLQWAEEDGATDV---------------- 796
Query: 67 EELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDE 102
+ LRA+ GF +L K++ + I D+
Sbjct: 797 DALRAKAGV-------GFGGGAELPWKKRKVRIGDD 825
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 21/76 (27%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGFAFVE+ +K+EA++A EALS +THLYGR L +E AK+
Sbjct: 951 HRGFAFVEFSSKEEAKSAFEALSGSTHLYGRRL------------------NLEFAKDDN 992
Query: 65 SLEELR--ARTAAQFT 78
S+E+LR ARTA + T
Sbjct: 993 SVEKLRSKARTAKRAT 1008
>gi|388582417|gb|EIM22722.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 725
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 14/77 (18%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISII--------------AP 52
RGFAF+++VT+++A+ A E+L +THL GRHL+ A D I+ I P
Sbjct: 647 RGFAFLDFVTRRDAEIAYESLKHTHLLGRHLVLQWADDAAINDIDALREKTASSRSTNMP 706
Query: 53 TFQVMERAKEGESLEEL 69
T + EG +LEEL
Sbjct: 707 TNKTKFVGPEGLALEEL 723
>gi|392332679|ref|XP_003752658.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 846
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQI 46
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 757 GAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV 800
>gi|30794154|ref|NP_083038.1| probable RNA-binding protein 19 [Mus musculus]
gi|73621449|sp|Q8R3C6.1|RBM19_MOUSE RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
gi|19343654|gb|AAH25619.1| RNA binding motif protein 19 [Mus musculus]
gi|21707580|gb|AAH34010.1| RNA binding motif protein 19 [Mus musculus]
gi|148687830|gb|EDL19777.1| RNA binding motif protein 19 [Mus musculus]
Length = 952
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMER 59
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++ T Q + R
Sbjct: 863 GAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV------TVQTLRR 913
>gi|403368470|gb|EJY84070.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 804
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
HRGF FVE+V+ +EA+NA + L +THLYGR +I A ++
Sbjct: 742 HRGFGFVEFVSSEEAKNAFKMLQHTHLYGRKIIIEWAKPEV 782
>gi|344295376|ref|XP_003419388.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
19-like [Loxodonta africana]
Length = 1089
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++ T Q + R K
Sbjct: 864 GAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV------TVQALRR-KT 916
Query: 63 GESLEELRARTAAQFTDEV 81
E E + + DE+
Sbjct: 917 AEHFHEPPKKKQSVVLDEI 935
>gi|392352553|ref|XP_003751242.1| PREDICTED: probable RNA-binding protein 19 [Rattus norvegicus]
Length = 955
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQI 46
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 866 GAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV 909
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF E+VT +EA+NA++AL +THL GRHL+ A
Sbjct: 728 RGFAFAEFVTAREAENAMKALKHTHLLGRHLVLQYA 763
>gi|361124073|gb|EHK96194.1| putative Multiple RNA-binding domain-containing protein 1 [Glarea
lozoyensis 74030]
Length = 763
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF +++T +EA+NALEAL +THL GR L+ A + I
Sbjct: 679 RGFAFADFITAREAENALEALKDTHLLGRRLVLEFAAEDSI 719
>gi|351694750|gb|EHA97668.1| Putative RNA-binding protein 19 [Heterocephalus glaber]
Length = 955
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMER 59
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++ T Q + R
Sbjct: 866 GAHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV------TLQTLRR 916
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVA 42
G+HRGFAFVE++TK +A+ A ++L +THLYGR L+ A
Sbjct: 756 GSHRGFAFVEFITKSDAKRAFDSLCQSTHLYGRRLVLEWA 795
>gi|403165616|ref|XP_003325592.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165799|gb|EFP81173.2| hypothetical protein PGTG_07425 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 759
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 29/38 (76%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGF FVEY TK+EAQ AL++L +HL GRHL+ A+D
Sbjct: 675 RGFGFVEYHTKKEAQEALKSLKFSHLLGRHLVIEYAND 712
>gi|12835985|dbj|BAB23448.1| unnamed protein product [Mus musculus]
Length = 590
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQI 46
G HRGF FV+++TKQ+A+ A AL +THLYGR L+ A ++
Sbjct: 501 GAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWADSEV 544
>gi|169855509|ref|XP_001834421.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
gi|116504503|gb|EAU87398.1| rRNA primary transcript binding protein [Coprinopsis cinerea
okayama7#130]
Length = 807
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
RGFAF+E+V++ EA+NA AL +THL GRHL+ A ++
Sbjct: 714 RGFAFLEFVSRHEAENAFNALRHTHLLGRHLVLEWAQEE 752
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 19/75 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FV+++TKQ+A+ A AL +THLYGR L V+E A
Sbjct: 854 GPHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRL------------------VLEWADT 895
Query: 63 GESLEELRARTAAQF 77
E+++ LR +TA F
Sbjct: 896 EETVQALRRKTAQHF 910
>gi|443895118|dbj|GAC72464.1| signal peptidase complex subunit [Pseudozyma antarctica T-34]
Length = 913
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSV------AHDQI 46
KF N RGF FVEY T +EAQ A EAL +THL GRHL+ A DQ+
Sbjct: 810 KFDNTTRGFGFVEYTTVREAQAAFEALKHTHLLGRHLVLQWSKQGENAQDQV 861
>gi|401888739|gb|EJT52690.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1040
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ-IISIIAPTFQVMERAKEGE 64
RGFAF+E+ T EAQ A++AL +THL GRHL+ A D+ + + A +V +K+GE
Sbjct: 958 RGFAFLEFTTHAEAQRAMDALKHTHLLGRHLVTEWAKDEDSVDVDALREKVSRDSKKGE 1016
>gi|406697498|gb|EKD00757.1| rRNA primary transcript binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1039
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ-IISIIAPTFQVMERAKEGE 64
RGFAF+E+ T EAQ A++AL +THL GRHL+ A D+ + + A +V +K+GE
Sbjct: 957 RGFAFLEFTTHAEAQRAMDALKHTHLLGRHLVTEWAKDEDSVDVDALREKVSRDSKKGE 1015
>gi|402592999|gb|EJW86926.1| RNA recognition domain-containing protein [Wuchereria bancrofti]
Length = 890
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 28/103 (27%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+++T+ +A+ A L +TH YGR L V+E AK
Sbjct: 809 HRGFGFVDFLTRADARRAFNGLVHSTHFYGRRL------------------VLEWAKPDS 850
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKK-----RKHMTILDE 102
+LEELR + AA +NG + +L KK + +T++D+
Sbjct: 851 NLEELREKAAAN----LNGNKGEVRLQKKMMRKIEQDLTVIDD 889
>gi|442749963|gb|JAA67141.1| Putative rna-binding protein rrm superfamily [Ixodes ricinus]
Length = 863
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLI--FSVAHDQIISII 50
G HRGFAFV+++TK +A+ A +AL +THLYGR L+ ++ + DQ + +
Sbjct: 776 GRHRGFAFVDFLTKNDAKRAFQALCQSTHLYGRRLVLEWASSDDQEVDTL 825
>gi|348551182|ref|XP_003461409.1| PREDICTED: probable RNA-binding protein 19-like [Cavia porcellus]
Length = 961
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMER 59
G HRGF FV++ TKQ+A+ A AL +THLYGR L+ A ++ T Q + R
Sbjct: 872 GRHRGFGFVDFFTKQDAKRAFNALCHSTHLYGRRLVLEWADSEV------TLQALRR 922
>gi|154280340|ref|XP_001540983.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412926|gb|EDN08313.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 675
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++++ +EA+NA++AL NTHL GR L+ A + I
Sbjct: 590 RGFAFADFISAREAENAMDALKNTHLLGRRLVLEFASSEAI 630
>gi|242802831|ref|XP_002484053.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717398|gb|EED16819.1| pre-rRNA processing protein Mrd1, putative [Talaromyces stipitatus
ATCC 10500]
Length = 812
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ +EA+NA++AL NTHL GR L+ A + I
Sbjct: 730 RGFAFADFVSSREAENAMDALKNTHLLGRKLVLEYASAEAI 770
>gi|240279857|gb|EER43362.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H143]
gi|325092985|gb|EGC46295.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus H88]
Length = 801
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++++ +EA+NA++AL NTHL GR L+ A + I
Sbjct: 716 RGFAFADFISAREAENAMDALKNTHLLGRRLVLEFASSEAI 756
>gi|258565855|ref|XP_002583672.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
gi|237907373|gb|EEP81774.1| multiple RNA-binding domain-containing protein 1 [Uncinocarpus
reesii 1704]
Length = 772
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF ++V+ +EA+NA++AL NTHL GR L+ V
Sbjct: 736 RGFAFADFVSAREAENAMDALRNTHLLGRRLVLGVC 771
>gi|225563037|gb|EEH11316.1| multiple RNA-binding domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 801
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++++ +EA+NA++AL NTHL GR L+ A + I
Sbjct: 716 RGFAFADFISAREAENAMDALKNTHLLGRRLVLEFASSEAI 756
>gi|241147227|ref|XP_002405304.1| RNA binding motif protein, putative [Ixodes scapularis]
gi|215493703|gb|EEC03344.1| RNA binding motif protein, putative [Ixodes scapularis]
Length = 597
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLI--FSVAHDQIISII 50
G HRGFAFV+++TK +A+ A +AL +THLYGR L+ ++ + DQ + +
Sbjct: 536 GRHRGFAFVDFLTKNDAKRAFQALCQSTHLYGRRLVLEWASSDDQEVDTL 585
>gi|212540104|ref|XP_002150207.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
gi|210067506|gb|EEA21598.1| pre-rRNA processing protein Mrd1, putative [Talaromyces marneffei
ATCC 18224]
Length = 812
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ +EA+NA++AL NTHL GR L+ A + I
Sbjct: 730 RGFAFADFVSSREAENAMDALKNTHLLGRKLVLEYASAEAI 770
>gi|170048416|ref|XP_001852664.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
gi|167870542|gb|EDS33925.1| multiple RNA-binding domain-containing protein 1 [Culex
quinquefasciatus]
Length = 302
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 19/80 (23%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
+HRGF FV+++ + +A+ A E + +THLYGR L V+E A+
Sbjct: 233 SHRGFCFVDFMAEPDAKRAFETMCQSTHLYGRRL------------------VLEWAEAE 274
Query: 64 ESLEELRARTAAQFTDEVNG 83
+ +EELR RTA QF +G
Sbjct: 275 DGVEELRKRTAEQFGGSTSG 294
>gi|426193530|gb|EKV43463.1| hypothetical protein AGABI2DRAFT_227175 [Agaricus bisporus var.
bisporus H97]
Length = 755
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+V++ EA+NA AL +THL GRHL+ A +
Sbjct: 672 RGFAFLEFVSRHEAENAFNALRHTHLLGRHLVLEWAEE 709
>gi|169771029|ref|XP_001819984.1| multiple RNA-binding domain-containing protein 1 [Aspergillus
oryzae RIB40]
gi|83767843|dbj|BAE57982.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 825
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ I
Sbjct: 743 RGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANEEAI 783
>gi|238486470|ref|XP_002374473.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
gi|220699352|gb|EED55691.1| pre-rRNA processing protein Mrd1, putative [Aspergillus flavus
NRRL3357]
Length = 826
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ I
Sbjct: 744 RGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANEEAI 784
>gi|391867843|gb|EIT77082.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 826
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ I
Sbjct: 744 RGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFANEEAI 784
>gi|389632927|ref|XP_003714116.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
gi|351646449|gb|EHA54309.1| multiple RNA-binding domain-containing protein 1, partial
[Magnaporthe oryzae 70-15]
Length = 867
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF E+ T +EA+NAL AL NTHL GR L+
Sbjct: 783 RGFAFAEFTTPKEAENALNALKNTHLLGRKLVL 815
>gi|409076284|gb|EKM76657.1| hypothetical protein AGABI1DRAFT_122567 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 755
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+V++ EA+NA AL +THL GRHL+ A +
Sbjct: 672 RGFAFLEFVSRHEAENAFNALRHTHLLGRHLVLEWAEE 709
>gi|440474273|gb|ELQ43025.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae Y34]
gi|440485469|gb|ELQ65427.1| multiple RNA-binding domain-containing protein 1 [Magnaporthe
oryzae P131]
Length = 831
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF E+ T +EA+NAL AL NTHL GR L+
Sbjct: 747 RGFAFAEFTTPKEAENALNALKNTHLLGRKLVL 779
>gi|209882532|ref|XP_002142702.1| multiple RNA-binding domain-containing protein 1 [Cryptosporidium
muris RN66]
gi|209558308|gb|EEA08353.1| multiple RNA-binding domain-containing protein 1, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD---QIISI 49
G +RG+ FVE++ K EA ALE L ++HLYGRHLI +A D QI SI
Sbjct: 746 GTNRGYCFVEFLGKLEALAALEQLQHSHLYGRHLIIELAKDSDEQIDSI 794
>gi|159130709|gb|EDP55822.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
A1163]
Length = 825
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ + Q+ ++ GE L
Sbjct: 742 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEKKV--GEQL 799
Query: 67 EELR 70
+ ++
Sbjct: 800 DRVK 803
>gi|297806589|ref|XP_002871178.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
gi|297317015|gb|EFH47437.1| hypothetical protein ARALYDRAFT_349841 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G + G+ F+ + TKQEA NA +ALSNTH YGR L+ A D
Sbjct: 640 GRYAGYGFIVFGTKQEALNAKKALSNTHFYGRPLVLQWARD 680
>gi|70990768|ref|XP_750233.1| pre-rRNA processing protein Mrd1 [Aspergillus fumigatus Af293]
gi|74669789|sp|Q4WJT7.1|MRD1_ASPFU RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|66847865|gb|EAL88195.1| pre-rRNA processing protein Mrd1, putative [Aspergillus fumigatus
Af293]
Length = 825
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ + Q+ ++ GE L
Sbjct: 742 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEKKV--GEQL 799
Query: 67 EELR 70
+ ++
Sbjct: 800 DRVK 803
>gi|300120416|emb|CBK19970.2| unnamed protein product [Blastocystis hominis]
Length = 639
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFVEYV+ +A+ A++AL++THL GR L+ A ++
Sbjct: 587 GTSRGFAFVEYVSSDDAKTAIKALASTHLLGRKLVVEYAKEE 628
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 4 GN-HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
GN HRGF FVE+++K +A+ A+E L N HLYGR L+
Sbjct: 717 GNTHRGFGFVEFMSKSDAKTAMENLKNVHLYGRRLVL 753
>gi|119496815|ref|XP_001265181.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
gi|119413343|gb|EAW23284.1| pre-rRNA processing protein Mrd1, putative [Neosartorya fischeri
NRRL 181]
Length = 825
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+++ + Q+ ++ GE L
Sbjct: 742 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANEEAVDPEQEIEQIEKKV--GEQL 799
Query: 67 EELR 70
+ ++
Sbjct: 800 DRVK 803
>gi|312086145|ref|XP_003144962.1| RNA recognition domain-containing protein [Loa loa]
Length = 190
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
HRGF FV+++T+ +A+ A L +TH YGR L V+E AK
Sbjct: 108 GHRGFGFVDFLTRSDARRAFSGLVHSTHFYGRRL------------------VLEWAKPD 149
Query: 64 ESLEELRARTAAQFTDEVNGFQNSTKLSKK-RKHMTILDE 102
+LEELR + AA + + K+ KK + +T++D+
Sbjct: 150 NNLEELREKAAASLSGNKGEVRLQKKMMKKIEQDLTVIDD 189
>gi|170110064|ref|XP_001886238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638822|gb|EDR03097.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 496
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+++V+++EA+NA +AL +THL GRHL+ A +
Sbjct: 415 RGFAFLDFVSRREAENAYDALRHTHLLGRHLVLEWAEE 452
>gi|393912130|gb|EJD76605.1| RNA recognition domain-containing protein [Loa loa]
Length = 874
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 20/99 (20%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+++T+ +A+ A L +TH YGR L V+E AK
Sbjct: 793 HRGFGFVDFLTRSDARRAFSGLVHSTHFYGRRL------------------VLEWAKPDN 834
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKK-RKHMTILDE 102
+LEELR + AA + + K+ KK + +T++D+
Sbjct: 835 NLEELREKAAASLSGNKGEVRLQKKMMKKIEQDLTVIDD 873
>gi|353238423|emb|CCA70370.1| probable RNA-binding protein [Piriformospora indica DSM 11827]
Length = 799
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 21/88 (23%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGFAFV++ T+ EA+NA+ L ++HL GRHL V+E A+ + +
Sbjct: 721 RGFAFVDFATRNEAENAMGQLRHSHLLGRHL------------------VLEWAEREQDV 762
Query: 67 EELRARTAAQFTDEVNGFQNSTKLSKKR 94
EE+R +T ++ D G NS + K R
Sbjct: 763 EEMRYKTKMEYGD---GAGNSGRKEKLR 787
>gi|68075777|ref|XP_679808.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500633|emb|CAH98045.1| conserved hypothetical protein [Plasmodium berghei]
Length = 997
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
+ RG+ FVE+++K E A+ AL +THLYGRHLI A+D I F M+ ++
Sbjct: 894 YNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLIIDFANDLIFDQNVDEFDKMKESQN 953
Query: 63 GESLEELRARTAAQFTDEV---NGFQNSTKLSKKRK 95
+ + T+ Q +V N SKKRK
Sbjct: 954 NPNQQGKDVITSEQAKRKVIYENEKSEKISESKKRK 989
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G+ RGFAF E++ +EAQNA E+L +TH YGR L+ + ++
Sbjct: 615 GSIRGFAFAEFLNNEEAQNAAESLQSTHFYGRRLVIEYSKEE 656
>gi|158292878|ref|XP_314164.4| AGAP005249-PA [Anopheles gambiae str. PEST]
gi|157017199|gb|EAA09490.4| AGAP005249-PA [Anopheles gambiae str. PEST]
Length = 862
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 38/79 (48%), Gaps = 19/79 (24%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FVEY + +A+ A + L +THLYGR L V+E A
Sbjct: 755 HRGFCFVEYDEESDAKRAFDTLGRSTHLYGRRL------------------VLEWAAADN 796
Query: 65 SLEELRARTAAQFTDEVNG 83
+EELR RTA QF G
Sbjct: 797 DVEELRKRTAEQFNSRDGG 815
>gi|238604914|ref|XP_002396324.1| hypothetical protein MPER_03469 [Moniliophthora perniciosa FA553]
gi|215468662|gb|EEB97254.1| hypothetical protein MPER_03469 [Moniliophthora perniciosa FA553]
Length = 98
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF+E+V++ EA+NA + L +THL GRHL+ A
Sbjct: 19 RGFAFLEFVSRHEAENAYDTLKHTHLLGRHLVLDWA 54
>gi|402083842|gb|EJT78860.1| multiple RNA-binding domain-containing protein 1 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 842
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF E+ T +EA+NAL AL +THL GR L+ A + +
Sbjct: 752 RGFAFAEFTTPKEAENALNALGSTHLLGRKLVLEFAQAEAV 792
>gi|121702823|ref|XP_001269676.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
gi|119397819|gb|EAW08250.1| pre-rRNA processing protein Mrd1, putative [Aspergillus clavatus
NRRL 1]
Length = 822
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+ + I Q+ ++ GE L
Sbjct: 739 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFANAEAIDAEQEIQQIEKKV--GEQL 796
Query: 67 EELR 70
+ ++
Sbjct: 797 DRVK 800
>gi|295673056|ref|XP_002797074.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226282446|gb|EEH38012.1| multiple RNA-binding domain-containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 806
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ +EA+NA+EAL +THL GR L+ A + I
Sbjct: 723 RGFAFADFVSAREAENAMEALKHTHLLGRRLVLEFASEDAI 763
>gi|358387674|gb|EHK25268.1| hypothetical protein TRIVIDRAFT_72404 [Trichoderma virens Gv29-8]
Length = 841
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 757 RGFAFADFVTPREAENALNALKDTHLLGRRLVL 789
>gi|219120004|ref|XP_002180750.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407466|gb|EEC47402.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 837
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
G+HRGFAFVEY+ +EA A+ LS THLYGRHL+
Sbjct: 762 GSHRGFAFVEYMAAKEAAAAMHTLSATHLYGRHLVL 797
>gi|340517170|gb|EGR47415.1| predicted protein [Trichoderma reesei QM6a]
Length = 797
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 713 RGFAFADFVTPREAENALNALKDTHLLGRRLVL 745
>gi|82793820|ref|XP_728191.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484422|gb|EAA19756.1| RNA recognition motif, putative [Plasmodium yoelii yoelii]
Length = 767
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
+ RG+ FVE+++K E A+ AL +THLYGRHLI A+D I F M+ ++
Sbjct: 664 YNRSRGYGFVEFMSKNECLAAINALQHTHLYGRHLIIDFANDLIFDQNVDEFDKMKESQN 723
Query: 63 GESLEELRARTAAQFTDEV-NGFQNSTKLSKKRKHMTI 99
+ + T+ Q +V + S K+S+ +K I
Sbjct: 724 NGNQQGKGVITSEQAKRKVIYENEKSAKISESKKRKII 761
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 717 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 749
>gi|225680707|gb|EEH18991.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb03]
Length = 805
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++++ +EA+NA+EAL +THL GR L+ A ++ I
Sbjct: 722 RGFAFADFISVREAENAMEALKHTHLLGRRLVLEFASEEAI 762
>gi|322712046|gb|EFZ03619.1| MRD1-like protein [Metarhizium anisopliae ARSEF 23]
Length = 841
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 757 RGFAFADFVTPREAENALNALKDTHLLGRRLVL 789
>gi|326474597|gb|EGD98606.1| pre-rRNA processing protein Mrd1 [Trichophyton tonsurans CBS
112818]
Length = 798
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 717 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 749
>gi|400603073|gb|EJP70671.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 850
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
+ RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 764 SSRGFAFADFVTPREAENALNALRDTHLLGRRLVL 798
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 754 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 786
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 745 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 777
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 727 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 759
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
HRGF F+++ T+Q AQ A +A+ + HL GRHLI A +
Sbjct: 516 HRGFCFIDFTTRQAAQAAFDAMQDVHLAGRHLIVQPAEE 554
>gi|346321688|gb|EGX91287.1| pre-rRNA processing protein Mrd1, putative [Cordyceps militaris
CM01]
Length = 849
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 766 RGFAFADFVTPREAENALNALRDTHLLGRRLVL 798
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF ++ T +EA++A+EAL NTHL GR L+ A
Sbjct: 741 RGFAFADFTTPKEAESAMEALRNTHLLGRRLVLDFA 776
>gi|320033511|gb|EFW15459.1| multiple RNA-binding domain-containing protein 1 [Coccidioides
posadasii str. Silveira]
Length = 813
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ +EA+NA++AL NTHL GR L+ ++ +
Sbjct: 731 RGFAFADFVSAREAENAMDALRNTHLLGRKLVLEFVSEEAV 771
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 718 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 750
>gi|358391000|gb|EHK40405.1| hypothetical protein TRIATDRAFT_153359 [Trichoderma atroviride IMI
206040]
Length = 839
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 755 RGFAFADFVTPREAENALNALKDTHLLGRRLVL 787
>gi|346973867|gb|EGY17319.1| multiple RNA-binding domain-containing protein [Verticillium
dahliae VdLs.17]
Length = 866
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF E+ T +EAQNA++AL +THL GR L+
Sbjct: 781 RGFAFAEFSTPKEAQNAIDALQHTHLLGRRLVL 813
>gi|226292390|gb|EEH47810.1| multiple RNA-binding domain-containing protein [Paracoccidioides
brasiliensis Pb18]
Length = 820
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++++ +EA+NA+EAL +THL GR L+ A ++ I
Sbjct: 737 RGFAFADFISVREAENAMEALKHTHLLGRRLVLEFASEEAI 777
>gi|119189731|ref|XP_001245472.1| hypothetical protein CIMG_04913 [Coccidioides immitis RS]
gi|392868364|gb|EAS34142.2| multiple RNA-binding domain-containing protein 1 [Coccidioides
immitis RS]
Length = 813
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ +EA+NA++AL NTHL GR L+ ++ +
Sbjct: 731 RGFAFADFVSAREAENAMDALRNTHLLGRKLVLEFVSEEAV 771
>gi|336387594|gb|EGO28739.1| hypothetical protein SERLADRAFT_459485 [Serpula lacrymans var.
lacrymans S7.9]
Length = 780
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+VT+ EA+NA L +THL GRHL+ A +
Sbjct: 699 RGFAFLEFVTRHEAENAYAMLRHTHLLGRHLVLQWAEE 736
>gi|407925474|gb|EKG18485.1| hypothetical protein MPH_04287 [Macrophomina phaseolina MS6]
Length = 836
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++ T +EA+NA++AL NTHL GR L+
Sbjct: 752 RGFAFADFTTPREAENAMDALRNTHLLGRKLVL 784
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++V+ +EA+NA++AL NTHL GR L+
Sbjct: 887 RGFAFADFVSSREAENAMDALRNTHLLGRRLVL 919
>gi|322695955|gb|EFY87755.1| putative MRD1 [Metarhizium acridum CQMa 102]
gi|326633449|gb|ADZ99447.1| pre-rRNA processing protein [Metarhizium anisopliae]
gi|326633451|gb|ADZ99448.1| pre-rRNA processing protein [Metarhizium anisopliae]
Length = 841
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 757 RGFAFADFVTAREAENALNALKDTHLLGRRLVL 789
>gi|255941010|ref|XP_002561274.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585897|emb|CAP93632.1| Pc16g09620 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 835
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGF F ++V+ +EA+NA++AL NTHL GR L+ +++ +
Sbjct: 753 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFVNEETV 793
>gi|302923914|ref|XP_003053775.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
gi|256734716|gb|EEU48062.1| hypothetical protein NECHADRAFT_30669 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF ++VT +EA+NAL AL +THL GR L+
Sbjct: 754 RGFAFADFVTPREAENALNALRDTHLLGRKLVL 786
>gi|196011704|ref|XP_002115715.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
gi|190581491|gb|EDV21567.1| hypothetical protein TRIADDRAFT_59687 [Trichoplax adhaerens]
Length = 319
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSN-THLYGRHLIFSVA-HDQIISII 50
HRGF F+E++TK +A+ A AL + THLYGR LI A DQ I+ I
Sbjct: 250 HRGFTFIEFITKADAKRAFTALQDSTHLYGRRLILQWAEEDQDITAI 296
>gi|255075605|ref|XP_002501477.1| predicted protein [Micromonas sp. RCC299]
gi|226516741|gb|ACO62735.1| predicted protein [Micromonas sp. RCC299]
Length = 951
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 44/74 (59%), Gaps = 18/74 (24%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+HRGFAFVE TK+EA ALEAL+ THLYGR L +ERA E
Sbjct: 872 GSHRGFAFVELSTKREASAALEALAGTHLYGRRL------------------TIERAAES 913
Query: 64 ESLEELRARTAAQF 77
+ +E +R +TAA+F
Sbjct: 914 DDVETIREKTAARF 927
>gi|14488165|emb|CAC42098.1| RBD protein [Chironomus tentans]
Length = 849
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 19/70 (27%)
Query: 6 HRGFAFVEYVTKQEAQNALEAL-SNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF F+++VTK +A++A +AL +THLYGR L V+E A E
Sbjct: 761 HRGFGFIDFVTKSDAKSAFDALHHSTHLYGRRL------------------VLEWAATEE 802
Query: 65 SLEELRARTA 74
+ E+R RTA
Sbjct: 803 DVTEIRKRTA 812
>gi|408388514|gb|EKJ68198.1| hypothetical protein FPSE_11665 [Fusarium pseudograminearum CS3096]
Length = 855
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF ++VT +EA+NAL +L +THL GR L+ A
Sbjct: 771 RGFAFADFVTPREAENALNSLRDTHLLGRKLVLDFA 806
>gi|392579716|gb|EIW72843.1| hypothetical protein TREMEDRAFT_25743, partial [Tremella
mesenterica DSM 1558]
Length = 749
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
+ RGFAF+E+ T EAQ A++AL +THL GRHL+ A +
Sbjct: 662 SSRGFAFLEFTTHVEAQRAMDALKHTHLLGRHLVIQWAKED 702
>gi|67516279|ref|XP_658025.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|74681510|sp|Q5BGA9.1|MRD1_EMENI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|40747364|gb|EAA66520.1| hypothetical protein AN0421.2 [Aspergillus nidulans FGSC A4]
gi|259489335|tpe|CBF89520.1| TPA: Multiple RNA-binding domain-containing protein 1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGA9] [Aspergillus
nidulans FGSC A4]
Length = 819
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+
Sbjct: 737 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFAN 773
>gi|425772895|gb|EKV11275.1| hypothetical protein PDIG_51110 [Penicillium digitatum PHI26]
gi|425782122|gb|EKV20050.1| hypothetical protein PDIP_20330 [Penicillium digitatum Pd1]
Length = 835
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGF F ++V+ +EA+NA++AL NTHL GR L+ +++ +
Sbjct: 753 RGFGFADFVSAREAENAMDALKNTHLLGRRLVLEFVNEEAV 793
>gi|405118918|gb|AFR93691.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. grubii H99]
Length = 752
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+ T EA A+EAL +THL GRHL+ A++
Sbjct: 669 RGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANE 706
>gi|58265434|ref|XP_569873.1| rRNA primary transcript binding protein [Cryptococcus neoformans
var. neoformans JEC21]
gi|134109003|ref|XP_776616.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818289|sp|P0CR17.1|MRD1_CRYNB RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|338818290|sp|P0CR16.1|MRD1_CRYNJ RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|50259296|gb|EAL21969.1| hypothetical protein CNBC1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226105|gb|AAW42566.1| rRNA primary transcript binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 769
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+ T EA A+EAL +THL GRHL+ A++
Sbjct: 686 RGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANE 723
>gi|170593753|ref|XP_001901628.1| RNA recognition motif. [Brugia malayi]
gi|158590572|gb|EDP29187.1| RNA recognition motif [Brugia malayi]
Length = 358
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 28/103 (27%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGE 64
HRGF FV+++T+ +A+ A L +TH YGR L V+E AK
Sbjct: 277 HRGFGFVDFLTRADARRAFNGLVHSTHFYGRRL------------------VLEWAKPDS 318
Query: 65 SLEELRARTAAQFTDEVNGFQNSTKLSKK-----RKHMTILDE 102
+LEELR + AA + G + +L KK + +T++D+
Sbjct: 319 NLEELREKAAANLS----GNKGEVRLQKKMMRKIEQDLTVIDD 357
>gi|189197515|ref|XP_001935095.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981043|gb|EDU47669.1| multiple RNA-binding domain containing protein 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 825
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 739 ASSRGFGFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 777
>gi|321254501|ref|XP_003193094.1| rRNA primary transcript binding protein [Cryptococcus gattii WM276]
gi|317459563|gb|ADV21307.1| rRNA primary transcript binding protein, putative [Cryptococcus
gattii WM276]
Length = 773
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+ T EA A+EAL +THL GRHL+ A++
Sbjct: 690 RGFAFLEFTTHTEAARAMEALKHTHLLGRHLVLQWANE 727
>gi|451993063|gb|EMD85538.1| hypothetical protein COCHEDRAFT_1187995 [Cochliobolus
heterostrophus C5]
Length = 828
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 742 ASSRGFGFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 780
>gi|451846216|gb|EMD59526.1| hypothetical protein COCSADRAFT_100727 [Cochliobolus sativus
ND90Pr]
Length = 828
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 742 ASSRGFGFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 780
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+
Sbjct: 742 RGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFAN 778
>gi|330935683|ref|XP_003305080.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
gi|311318026|gb|EFQ86793.1| hypothetical protein PTT_17827 [Pyrenophora teres f. teres 0-1]
Length = 825
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 739 ASSRGFGFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 777
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGF F ++V+ +EA+NA++AL NTHL GR L+ A+
Sbjct: 742 RGFGFADFVSAREAENAMDALKNTHLLGRKLVLEFAN 778
>gi|169616726|ref|XP_001801778.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
gi|111060126|gb|EAT81246.1| hypothetical protein SNOG_11538 [Phaeosphaeria nodorum SN15]
Length = 830
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 744 ASSRGFGFAEFTTKRDAVNAMNALKNTHLLGRRLVLAFA 782
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ RGF F E+ TK++A NA+ AL NTHL GR L+ + A
Sbjct: 745 SSRGFGFAEFTTKRDALNAMNALKNTHLLGRRLVLAFA 782
>gi|303322875|ref|XP_003071429.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111131|gb|EER29284.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 813
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAF ++V+ EA+NA++AL NTHL GR L+ ++ +
Sbjct: 731 RGFAFADFVSACEAENAMDALRNTHLLGRKLVLEFVSEEAV 771
>gi|452844020|gb|EME45954.1| hypothetical protein DOTSEDRAFT_168162 [Dothistroma septosporum
NZE10]
Length = 822
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAF E+ T +EAQ+A++AL +THL GR L+
Sbjct: 739 RGFAFAEFTTAKEAQSAMDALRDTHLLGRRLVL 771
>gi|398398892|ref|XP_003852903.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
gi|339472785|gb|EGP87879.1| hypothetical protein MYCGRDRAFT_85600 [Zymoseptoria tritici IPO323]
Length = 770
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF ++ T +EAQ+A+EAL +THL GR L+ A +
Sbjct: 688 RGFAFADFTTVKEAQSAMEALRDTHLLGRRLVIDFASE 725
>gi|340924295|gb|EGS19198.1| multiple RNA-binding domain-containing protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 832
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGESL 66
RGFAF E+ T +EA NAL AL +THL GR L+ A + P Q+ +A E ++
Sbjct: 748 RGFAFAEFATAKEALNALTALKDTHLLGRRLVLDFAEADEVD---PEEQI--KAMEKKTR 802
Query: 67 EELRARTAAQFT 78
++L T Q T
Sbjct: 803 DQLNKVTLQQLT 814
>gi|453086560|gb|EMF14602.1| multiple RNA-binding domain-containing protein 1 [Mycosphaerella
populorum SO2202]
Length = 828
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF ++ T +EAQ+A++AL +THL GR L+ A +
Sbjct: 742 RGFAFADFTTVKEAQSAMDALKDTHLLGRRLVLDFAEE 779
>gi|367018676|ref|XP_003658623.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
gi|347005890|gb|AEO53378.1| hypothetical protein MYCTH_2294614 [Myceliophthora thermophila ATCC
42464]
Length = 831
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF E+ T +EA NAL AL +THL GR L+ A
Sbjct: 748 RGFAFAEFATAKEALNALTALKDTHLLGRRLVLDFA 783
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAF EYV+ +EA++A+ AL THL GR L+ A
Sbjct: 743 RGFAFAEYVSAKEAEHAMSALQGTHLLGRRLVLQYAQ 779
>gi|66475966|ref|XP_627799.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
gi|32399047|emb|CAD98287.1| RNA-binding domain protein [Cryptosporidium parvum]
gi|46229208|gb|EAK90057.1| 5x RRM. Mrd1p like, splicing related [Cryptosporidium parvum Iowa
II]
Length = 806
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++G+ F+E++ K EA +ALE +THLYGRHLI VA +
Sbjct: 752 GTNKGYCFIEFLGKLEAISALEQFQHTHLYGRHLIIEVAEN 792
>gi|67623683|ref|XP_668124.1| RNA-binding domain protein [Cryptosporidium hominis TU502]
gi|54659302|gb|EAL37885.1| RNA-binding domain protein [Cryptosporidium hominis]
Length = 800
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G ++G+ F+E++ K EA +ALE +THLYGRHLI VA +
Sbjct: 746 GTNKGYCFIEFLGKLEAISALEQFQHTHLYGRHLIIEVAEN 786
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH-DQIISI-----IAPTFQVMERA 60
RGFAFVE+ + EA+ A +ALS THL GRHL+ DQ S+ P F++ R
Sbjct: 611 RGFAFVEFRSTAEAKEAKQALSQTHLLGRHLVIEYGQADQGASLRDDKRPRPDFELPNRR 670
Query: 61 KE 62
K+
Sbjct: 671 KK 672
>gi|393219661|gb|EJD05148.1| hypothetical protein FOMMEDRAFT_18782 [Fomitiporia mediterranea
MF3/22]
Length = 828
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 25/103 (24%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERA 60
KF +H RG+AF+E+ T+ EA+ A+ +THL GRHL+ A D
Sbjct: 744 KFNSHSRGYAFLEFTTRLEAERVFGAMMHTHLLGRHLVLEWAEDG--------------- 788
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKRKHMTILDEG 103
G +E LR + GF + +++ +++ + +EG
Sbjct: 789 --GRDVEGLRRKAGV-------GFGDGSEMPGRKRKLEFGEEG 822
>gi|336364271|gb|EGN92632.1| hypothetical protein SERLA73DRAFT_190814 [Serpula lacrymans var.
lacrymans S7.3]
Length = 780
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+VT+ EA+NA L + HL GRHL+ A +
Sbjct: 699 RGFAFLEFVTRHEAENAYAMLRHIHLLGRHLVLQWAEE 736
>gi|159112569|ref|XP_001706513.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434610|gb|EDO78839.1| Polyadenylate-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 663
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
G RGFAFV+Y T++EA+ AL + TH YGRHL+
Sbjct: 603 GRLRGFAFVQYATEKEAEVALNRIKLTHFYGRHLV 637
>gi|339237553|ref|XP_003380331.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316976854|gb|EFV60053.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 645
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 19/76 (25%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G HRGF FVE+ K +A+ A + L +THLYGR L V+E A
Sbjct: 575 GQHRGFGFVEFNCKADAEKAFKHLGVSTHLYGRRL------------------VLEWADL 616
Query: 63 GESLEELRARTAAQFT 78
L+ELR +TA FT
Sbjct: 617 EGDLQELRDKTAEYFT 632
>gi|452983642|gb|EME83400.1| hypothetical protein MYCFIDRAFT_164576, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 833
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGF F E+ T +EAQ+A+EAL +THL GR L+
Sbjct: 752 RGFGFAEFTTIKEAQSAMEALRDTHLLGRRLVI 784
>gi|367052423|ref|XP_003656590.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
gi|347003855|gb|AEO70254.1| hypothetical protein THITE_135180 [Thielavia terrestris NRRL 8126]
Length = 2006
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/40 (57%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 5 NH--RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
NH RGFAF E+ T +EA NAL AL +THL GR L+ A
Sbjct: 766 NHTSRGFAFAEFATPREALNALTALKDTHLLGRRLVLDFA 805
>gi|290993156|ref|XP_002679199.1| RNA binding domain-containing protein [Naegleria gruberi]
gi|284092815|gb|EFC46455.1| RNA binding domain-containing protein [Naegleria gruberi]
Length = 763
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+HRGFAF+E+V+ +E A +AL ++HLYGR L + D
Sbjct: 685 NSHRGFAFIEFVSPKECHAAYQALKHSHLYGRTLKIEFSED 725
>gi|116182074|ref|XP_001220886.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
gi|88185962|gb|EAQ93430.1| hypothetical protein CHGG_01665 [Chaetomium globosum CBS 148.51]
Length = 2009
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 5 NH--RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQV--MERA 60
NH RGFAF E+ T +EA NAL AL +THL GR L+ A + P Q+ ME+
Sbjct: 749 NHTSRGFAFAEFSTAKEALNALTALKDTHLLGRRLVLDFAEADEVD---PEEQIKAMEKK 805
Query: 61 KEGE----SLEEL 69
G+ +L+EL
Sbjct: 806 IRGQVNKVTLQEL 818
>gi|345561254|gb|EGX44350.1| hypothetical protein AOL_s00193g78 [Arthrobotrys oligospora ATCC
24927]
Length = 870
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGF F ++V+ +EA+NA+EAL +THL+GR L+
Sbjct: 770 RGFGFAQFVSVREAENAMEALRHTHLHGRPLVL 802
>gi|313234383|emb|CBY24582.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVAHDQIISIIA 51
G HRGFAFVE+ +A +A +AL +TH+YGR L+ A SI A
Sbjct: 145 GKHRGFAFVEFKLAADASSAFKALKLSTHIYGRRLVLEWADSNTESISA 193
>gi|320593340|gb|EFX05749.1| pre-rRNA processing protein [Grosmannia clavigera kw1407]
Length = 970
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
K GN RG+AF E++T EA +A++AL +THL GR L+ A
Sbjct: 832 KVGNGTRGYAFAEFLTASEAAHAMDALRDTHLLGRRLVLQYA 873
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
KFG RGF F ++ T +EAQ A++AL +THL GR L+
Sbjct: 684 KFGGATRGFGFADFATAREAQGAMDALKDTHLLGRRLVL 722
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGFAF+E++ +EA+NA++ L HL GR L+ A ++ ++
Sbjct: 778 RGFAFIEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQEEAVN 819
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGFAFVE++ +EA+NA++ L HL GR LI A + ++
Sbjct: 795 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLIMQYAEEDAVN 836
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE+V +EA+NA++ L HL GR L+
Sbjct: 778 RGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVM 810
>gi|395326326|gb|EJF58737.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 831
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 26/38 (68%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+ T+ EA+ A L +THL GRHL+ A +
Sbjct: 716 RGFAFLEFTTRHEAEQAYATLRHTHLLGRHLVLEWAEE 753
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G HRGFAFVE+ ++A A +L + HLYGRHL+ A
Sbjct: 419 GRHRGFAFVEFTNPRDAAAARSSLKSAHLYGRHLVIDWA 457
>gi|393239414|gb|EJD46946.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 769
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAF+E+V+ QEA++A L +TH GRHL+ A
Sbjct: 687 RGFAFLEFVSHQEAEHAFATLRHTHFLGRHLVLEWA 722
>gi|324509584|gb|ADY44027.1| RNA-binding protein 19 [Ascaris suum]
Length = 567
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVA 42
HRGF FV+++T+ +A+ A +AL +THLYGR L+ A
Sbjct: 485 GHRGFGFVDFLTRADARRAFDALVHSTHLYGRRLVLEWA 523
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE++ +EA+NA++ L HL GR L+ A
Sbjct: 780 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQ 816
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
RGFAFVE++ +EA+NA++ L HL GR L+ A + +
Sbjct: 786 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVIQYAQAEAV 826
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G +G+AF+EY TKQEA NA A++N+HLYGRHL+ A +
Sbjct: 641 GQLKGYAFIEYATKQEAANAKAAMANSHLYGRHLVIEFAKE 681
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
K G R FAF+ + T+ EAQNA+E ++N ++ + S+A
Sbjct: 37 KEGVSREFAFLGFSTESEAQNAIEKMNNAYILSSKINVSIA 77
>gi|336464808|gb|EGO53048.1| hypothetical protein NEUTE1DRAFT_73283 [Neurospora tetrasperma FGSC
2508]
Length = 827
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH-------DQIISI 49
+ RGFAF E+ T +EA NA +L +TH+ GR L+ A DQI +I
Sbjct: 742 SSRGFAFAEFSTAKEALNAFNSLKDTHILGRRLVIDFAQAEDIDPEDQIAAI 793
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA+E L HL GR L+
Sbjct: 791 RGFAFVEFLLPKEAENAMEQLQGVHLLGRRLVM 823
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE++ +EA+NA++ L HL GR L+ A
Sbjct: 768 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAE 804
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGFAFVE++ +EA+NA++ L HL GR L+ A ++
Sbjct: 781 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVMQYAEQDAVN 822
>gi|449544221|gb|EMD35195.1| hypothetical protein CERSUDRAFT_116663 [Ceriporiopsis subvermispora
B]
Length = 788
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E+ T EA A L +THL GRHL+ A D
Sbjct: 713 RGFAFLEFTTHAEAARAYATLRHTHLLGRHLVLEWAED 750
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE++ +EA+NA++ L HL GR L+ A
Sbjct: 769 RGFAFVEFLLPKEAENAMDQLEGVHLLGRRLVMQYAE 805
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE+V +EA+NA++ L HL GR L+ A
Sbjct: 792 RGFAFVEFVLLKEAENAMDQLEGVHLLGRRLVMQYA 827
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE+V +EA+NA++ L HL GR L+ A
Sbjct: 792 RGFAFVEFVLLKEAENAMDQLEGVHLLGRRLVMQYA 827
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE++ +EAQ+A++ L HL GR L+ A
Sbjct: 775 RGFAFVEFLIPKEAQSAMDQLQGVHLLGRRLVMQYAE 811
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 8 GFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
GF FVE+ TK++A A+ L NT L G L ++H Q +
Sbjct: 684 GFGFVEFKTKEQANIAISTLDNTVLDGHKLQLKLSHRQNV 723
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RGFAF+E++ +EA+NA++ L HL GR L+ A +
Sbjct: 783 RGFAFIEFLLPKEAENAMDQLQGVHLLGRRLVMQYAQE 820
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE++ EA+NA++ L HL GR L+ A
Sbjct: 752 RGFAFVEFLLPSEAENAMDQLQGVHLLGRRLVMQYA 787
>gi|392563575|gb|EIW56754.1| hypothetical protein TRAVEDRAFT_127405 [Trametes versicolor
FP-101664 SS1]
Length = 784
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
RGFAF+E+ T+ EA+ A L +TH GRHL+ A + + +
Sbjct: 704 RGFAFLEFTTRHEAERAYATLRHTHFLGRHLVLEWAEEGEVDV 746
>gi|260948938|ref|XP_002618766.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
gi|238848638|gb|EEQ38102.1| hypothetical protein CLUG_02225 [Clavispora lusitaniae ATCC 42720]
Length = 633
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVEY +EA+NA+ L HL GR L+ A
Sbjct: 547 RGFAFVEYTMLKEAENAMNQLEGVHLLGRRLVMQYAE 583
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 792 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLVM 824
>gi|403416240|emb|CCM02940.1| predicted protein [Fibroporia radiculosa]
Length = 805
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 5 NHR--GFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
NHR GFAF+E+V+ EA A L +TH GRHL+ A D
Sbjct: 721 NHRTRGFAFLEFVSPHEAARAHATLRHTHFLGRHLVLEWAED 762
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G RGF FV + T ++AQ ALEAL L GR L S+A + T Q E
Sbjct: 130 GRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPSTVQSQEEETAS 189
Query: 64 ES 65
ES
Sbjct: 190 ES 191
>gi|85116206|ref|XP_965014.1| hypothetical protein NCU02611 [Neurospora crassa OR74A]
gi|74696746|sp|Q7SG09.1|MRD1_NEUCR RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|28926814|gb|EAA35778.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 827
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
+ RGFAF E+ T +EA NA +L +TH+ GR L+ A + I
Sbjct: 742 SSRGFAFAEFSTAKEALNAFNSLKDTHILGRRLVIDFAQAEDI 784
>gi|350296911|gb|EGZ77888.1| multiple RNA-binding domain-containing protein 1 [Neurospora
tetrasperma FGSC 2509]
Length = 826
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
+ RGFAF E+ T +EA NA +L +TH+ GR L+ A + I
Sbjct: 741 SSRGFAFAEFSTAKEALNAFNSLKDTHILGRRLVIDFAQAEDI 783
>gi|38567159|emb|CAE76453.1| related to MRD1 [Neurospora crassa]
Length = 790
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
+ RGFAF E+ T +EA NA +L +TH+ GR L+ A + I
Sbjct: 705 SSRGFAFAEFSTAKEALNAFNSLKDTHILGRRLVIDFAQAEDI 747
>gi|171695432|ref|XP_001912640.1| hypothetical protein [Podospora anserina S mat+]
gi|170947958|emb|CAP60122.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 5 NH--RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
NH RGFAF E+ T +EA NA+ AL +TH GR L+
Sbjct: 724 NHSSRGFAFAEFSTGKEALNAITALKDTHFLGRRLVL 760
>gi|71028784|ref|XP_764035.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350989|gb|EAN31752.1| hypothetical protein, conserved [Theileria parva]
Length = 727
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
HRGF FV +++K +A+ A+E L N HLYGR L+
Sbjct: 687 HRGFGFVVFMSKNDAKLAMENLKNVHLYGRRLVL 720
>gi|336262864|ref|XP_003346214.1| hypothetical protein SMAC_05751 [Sordaria macrospora k-hell]
gi|380093543|emb|CCC08506.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 836
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
+ RGFAF E+ T +EA NA +L +TH+ GR L+ A + I
Sbjct: 751 SSRGFAFAEFSTAKEALNAFTSLKDTHILGRRLVIDFAQAEDI 793
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE T +EAQNA++ L+ T + GR ++ ++A
Sbjct: 37 GRSRGFGFVEMSTDEEAQNAVKNLNGTDVEGRKIVVNIAR 76
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 782 RGFAFVEFLLPKEAENAMDQLQGVHLLGRRLV 813
>gi|302770274|ref|XP_002968556.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
gi|302788312|ref|XP_002975925.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300156201|gb|EFJ22830.1| hypothetical protein SELMODRAFT_175329 [Selaginella moellendorffii]
gi|300164200|gb|EFJ30810.1| hypothetical protein SELMODRAFT_169951 [Selaginella moellendorffii]
Length = 477
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN++G+AFV Y ++ A+ A+E L+N+ L GR L FS H Q
Sbjct: 140 GNNKGYAFVTYTNRETAEKAIETLANSELKGRKLRFS--HSQ 179
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella
moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella
moellendorffii]
Length = 89
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF 54
G +G+ F+ YV++ +AQ+AL+A+ +L GR + + A I S ++P F
Sbjct: 33 GKSKGYGFITYVSEADAQDALQAMDGKNLNGREIRVNFAARDIPSRMSPGF 83
>gi|84996687|ref|XP_953065.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304061|emb|CAI76440.1| hypothetical protein, conserved [Theileria annulata]
Length = 716
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
HRGF FV +++K +A+ A+E L N HLYGR L+
Sbjct: 675 HRGFGFVVFMSKNDAKLAMENLKNVHLYGRRLVL 708
>gi|440793396|gb|ELR14581.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
GN RGF FVE+ TK+EA NALE ++ + GR +
Sbjct: 323 GNPRGFGFVEFFTKEEAANALEKVNAQPIRGRRV 356
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 802 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 834
>gi|399949922|gb|AFP65578.1| polyadenylate binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 545
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSV 41
K G HRGFAF+E+ + +EA+ + + N HL+ RHL S+
Sbjct: 502 KLGKHRGFAFIEFKSLEEAKKTVLSTQNIHLFNRHLFVSL 541
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+NA++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENAMDQLHGVHLLGRRLVM 835
>gi|448122956|ref|XP_004204573.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|448125223|ref|XP_004205131.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358249764|emb|CCE72830.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
gi|358350112|emb|CCE73391.1| Piso0_000426 [Millerozyma farinosa CBS 7064]
Length = 841
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+NA+E L HL GR L+ A
Sbjct: 754 RGFAFVEFNLLKEAENAIEQLQGVHLLGRRLVMQYAE 790
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE+ T +EA++A++ L HL GR L+ A
Sbjct: 741 RGFAFVEFSTLKEAESAMDQLQGVHLLGRRLVMDFA 776
>gi|167521049|ref|XP_001744863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776477|gb|EDQ90096.1| predicted protein [Monosiga brevicollis MX1]
Length = 307
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH-DQIISIIAPTFQ 55
+H+GFAF+EY T ++A+ A++ + + LYGR L +VA+ + +++ P +Q
Sbjct: 47 DHKGFAFIEYATLEDAEAAIDNMHESELYGRTLRVNVANVTRNLNLAKPLWQ 98
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G RGF FV + T ++AQ ALEAL L GR L S+A + T Q E
Sbjct: 258 GRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPSTVQSQEEETAS 317
Query: 64 ES 65
ES
Sbjct: 318 ES 319
>gi|387594566|gb|EIJ89590.1| hypothetical protein NEQG_00360 [Nematocida parisii ERTm3]
Length = 397
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
G HRGF FVE + A L L + HLYGRH++
Sbjct: 357 GTHRGFCFVEMQSSDAANTLLRKLKHVHLYGRHIV 391
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFVE + EA A+EAL ++ + GR++ A D+
Sbjct: 40 GKPRGFAFVEMADESEADKAIEALDDSSVNGRNIAVKKADDR 81
>gi|387596588|gb|EIJ94209.1| hypothetical protein NEPG_00876 [Nematocida parisii ERTm1]
Length = 364
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
G HRGF FVE + A L L + HLYGRH++
Sbjct: 324 GTHRGFCFVEMQSSDAANTLLRKLKHVHLYGRHIV 358
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G+ RGF FVEY T QE A + TH YGR L+ +H
Sbjct: 775 GSGRGFCFVEYATPQETARATALVQGTHFYGRKLVVEYSH 814
>gi|167524070|ref|XP_001746371.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775133|gb|EDQ88758.1| predicted protein [Monosiga brevicollis MX1]
Length = 131
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 1 MKFGNH---RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVM 57
M+ GN +G A+V Y +A+NA E LS ++ GR+L +V + Q+ + +Q +
Sbjct: 51 MRTGNKPETKGTAYVVYEDIFDAKNACENLSGFNVMGRYL--TVVYHQVNKL----YQKL 104
Query: 58 ERAKEGESLEELRARTAAQFTDE 80
+R KE E LE+LR + A+ D+
Sbjct: 105 DRKKEQEELEKLRKKVNAKERDQ 127
>gi|168699727|ref|ZP_02732004.1| putative RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 113
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FVE +QEAQ A++AL+N + GR L ++A
Sbjct: 20 GRSRGFGFVEMANEQEAQAAIDALNNQLMNGRPLTVNIA 58
>gi|168001864|ref|XP_001753634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695041|gb|EDQ81386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+ Y K++A A++ + N LYGR L + A Q I
Sbjct: 47 HRGFAFITYFEKEDAAAAMDNMHNGELYGRVLTVNYAQPQKI 88
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPT 53
G RGF FV + T ++AQ ALE+L L GR L S+A P+
Sbjct: 185 GRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPS 234
>gi|378756564|gb|EHY66588.1| hypothetical protein NERG_00228, partial [Nematocida sp. 1 ERTm2]
Length = 398
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
G HRGF FVE + + A L+ L + HLYGRH++
Sbjct: 358 GTHRGFCFVEMQSSEAANILLKKLRHVHLYGRHIV 392
>gi|67540172|ref|XP_663860.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|40739450|gb|EAA58640.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|259479533|tpe|CBF69842.1| TPA: peptidyl prolyl cis-trans isomerase Cyclophilin, putative
(AFU_orthologue; AFUA_2G12990) [Aspergillus nidulans
FGSC A4]
Length = 153
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
NHRGF +VE+ + ++A+ A++ + + LYGR + + A Q
Sbjct: 51 NHRGFGYVEFDSPEDAKEAIDNMDGSELYGRTIKVAPAKPQ 91
>gi|212533925|ref|XP_002147119.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
gi|210072483|gb|EEA26572.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
Length = 153
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
NHRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 51 NHRGFGYVEFEVPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|390597943|gb|EIN07342.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 173
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G HRGFAFV Y + ++AQ+A++ + L GR L S+A
Sbjct: 53 GKHRGFAFVTYTSAEDAQDAIDNMDLNELRGRVLKVSLAR 92
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII----------SIIAPT 53
G HRGF FVEY +++ +A++ + N LYGR L + A I + A
Sbjct: 55 GKHRGFGFVEYENAEDSADAIDNMHNAELYGRVLRCNYAQPMKIKGGDKGFSHQPVWADA 114
Query: 54 FQVMERAKEGESLEEL 69
ERA+ + LE+L
Sbjct: 115 DDWYERAEAEQELEKL 130
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA++A++ L HL GR L+
Sbjct: 780 RGFAFVEFLLPKEAEDAMDQLQGVHLLGRRLVM 812
>gi|212533927|ref|XP_002147120.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
gi|210072484|gb|EEA26573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
Length = 152
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
NHRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 51 NHRGFGYVEFEVPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE T +EAQNA++ L+ + GR ++ ++A
Sbjct: 37 GRSRGFGFVEMSTDEEAQNAVKNLNGADVEGRKIVVNIAR 76
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFV Y + +EA +A++AL L+GR + + A+D+
Sbjct: 78 GRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 119
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G RGF FV Y+T QEAQ A+EA+ L GR +
Sbjct: 75 GRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTI 108
>gi|350295748|gb|EGZ76725.1| hypothetical protein NEUTE2DRAFT_142568 [Neurospora tetrasperma
FGSC 2509]
Length = 312
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G + G+ F+E+ T++EA+ ALE+L+ L GR + H + S
Sbjct: 60 GRNPGYCFIEFTTREEAERALESLAGVDLCGRSVKLGPCHPKTSS 104
>gi|85113551|ref|XP_964541.1| hypothetical protein NCU00707 [Neurospora crassa OR74A]
gi|28926327|gb|EAA35305.1| predicted protein [Neurospora crassa OR74A]
Length = 300
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G + G+ F+E+ T++EA+ ALE+L+ L GR + H + S
Sbjct: 51 GRNPGYCFIEFTTREEAERALESLAGVDLCGRSVKLGPCHPKTSS 95
>gi|336463684|gb|EGO51924.1| hypothetical protein NEUTE1DRAFT_113950 [Neurospora tetrasperma
FGSC 2508]
Length = 300
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G + G+ F+E+ T++EA+ ALE+L+ L GR + H + S
Sbjct: 51 GRNPGYCFIEFTTREEAERALESLAGVDLCGRSVKLGPCHPKTSS 95
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE++ +EA+ A++ L HL GR L+ A
Sbjct: 763 RGFAFVEFLLPKEAEAAMDQLQGVHLLGRRLVMQYAQ 799
>gi|242779149|ref|XP_002479384.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces stipitatus ATCC 10500]
gi|218723003|gb|EED22421.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces stipitatus ATCC 10500]
Length = 153
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
NHRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 51 NHRGFGYVEFEIPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|145354241|ref|XP_001421399.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581636|gb|ABO99692.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 288
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSV 41
G +G+A V++ T +EAQNA+E + N+ + GR +I V
Sbjct: 150 GRSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRV 187
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma
gondii ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRGF FVE+ + +A+ A+E + N LYGR L
Sbjct: 59 GLHRGFGFVEFEEEDDAKEAMENMDNAELYGRTL 92
>gi|294656916|ref|XP_002770331.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
gi|199431836|emb|CAR65685.1| DEHA2D17358p [Debaryomyces hansenii CBS767]
Length = 842
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+NA+ L HL GR L+ A
Sbjct: 754 RGFAFVEFSLLKEAENAMNQLEGVHLLGRRLVMQYAE 790
>gi|449545418|gb|EMD36389.1| hypothetical protein CERSUDRAFT_115394 [Ceriporiopsis subvermispora
B]
Length = 265
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AF+EY +++AQ AL L GR L+ + AH
Sbjct: 71 GKPRGYAFIEYAEQEDAQKALNGADGKLLRGRKLVVTYAH 110
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ T ++A +ALE+L+NT + GR +
Sbjct: 418 GRPKGFAFVEFETVKDATDALESLNNTDIEGRSI 451
>gi|344301140|gb|EGW31452.1| multiple RNA-binding domain-containing protein 1 [Spathaspora
passalidarum NRRL Y-27907]
Length = 841
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+NA+ L HL GR L+ A
Sbjct: 756 RGFAFVEFNLMKEAENAMNQLEGVHLLGRRLVMQYAE 792
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+N ++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENVMDQLHGVHLLGRRLVM 835
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
RGFAFVE++ +EA+N ++ L HL GR L+
Sbjct: 803 RGFAFVEFLLPKEAENVMDQLHGVHLLGRRLVM 835
>gi|449548452|gb|EMD39419.1| hypothetical protein CERSUDRAFT_113071 [Ceriporiopsis subvermispora
B]
Length = 277
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AF+EY +++AQ AL L GR L+ + AH
Sbjct: 83 GKPRGYAFIEYAEQEDAQKALNGADGKLLRGRKLVVTYAH 122
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
G HRGF FVEY K +A A++ ++N L+GR + V + Q + I
Sbjct: 55 GTHRGFGFVEYEEKDDAAAAIDNMNNAELFGR--VLKVNYAQPMKI 98
>gi|168005596|ref|XP_001755496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693203|gb|EDQ79556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGFAF+ Y K++A A++ + N LYGR L + A Q
Sbjct: 47 HRGFAFITYFEKEDAAAAMDNMHNGELYGRVLTVNYAQPQ 86
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ G RGFAFV Y EAQ A+E L + GRH++ A
Sbjct: 52 RTGESRGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQFA 92
>gi|226286664|gb|EEH42177.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 152
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+AQ+A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDAQDAQDAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|336366002|gb|EGN94350.1| hypothetical protein SERLA73DRAFT_188191 [Serpula lacrymans var.
lacrymans S7.3]
Length = 298
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFVE++ +++A AL+ ++ L GR L+ + AH
Sbjct: 88 GKPRGYAFVEFINQKDANKALDGANDKLLRGRKLVVTYAH 127
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ T +EA+ ++ L HL GR L+ A
Sbjct: 54 RGFAFVEFNTVKEAETVMDQLQGVHLLGRRLVLDFAE 90
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
GN +GF FV Y +EAQ+A++AL +T + G+ L S A + A + + R+ E
Sbjct: 262 GNSKGFGFVNYEHHEEAQSAVDALHDTDIRGKKLFVSRAQKK-----AEREEELRRSYEQ 316
Query: 64 ESLEEL 69
+E+L
Sbjct: 317 AKMEKL 322
>gi|336275599|ref|XP_003352553.1| hypothetical protein SMAC_01387 [Sordaria macrospora k-hell]
gi|380094442|emb|CCC07821.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G + G+ F+E+ T++EA+ AL++L+ L GR + H + S
Sbjct: 61 GRNPGYCFIEFTTREEAERALDSLTGVDLCGRSVKLGPCHPKTSS 105
>gi|388580842|gb|EIM21154.1| hypothetical protein WALSEDRAFT_19471, partial [Wallemia sebi CBS
633.66]
Length = 105
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 1 MKFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
++FG+ +GF FV+Y TK++A+ A++AL+ GR L+ +A
Sbjct: 56 IRFGSRSKGFGFVDYATKEQAETAVKALNGQDYQGRTLVVEIAR 99
>gi|126275158|ref|XP_001386803.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126212672|gb|EAZ62780.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 838
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+NA+ L HL GR L+ A
Sbjct: 753 RGFAFVEFNLLKEAENAMNQLEGVHLLGRRLVMQYAE 789
>gi|336378677|gb|EGO19834.1| hypothetical protein SERLADRAFT_401051 [Serpula lacrymans var.
lacrymans S7.9]
Length = 176
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFVE++ +++A AL+ ++ L GR L+ + AH
Sbjct: 88 GKPRGYAFVEFINQKDANKALDGANDKLLRGRKLVVTYAH 127
>gi|401409123|ref|XP_003884010.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
gi|325118427|emb|CBZ53978.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
Length = 145
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRGF F+E+ + +A+ A+E + N LYGR L
Sbjct: 59 GLHRGFGFIEFEEEDDAKEAMENMDNAELYGRTL 92
>gi|326515262|dbj|BAK03544.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520728|dbj|BAJ92727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
K G RG+AFV+Y TK+EAQ A E ++ + GR ++ +A ++
Sbjct: 54 KRGEPRGYAFVQYTTKEEAQLAKEKMNGKLVCGRPVVVHLASEK 97
>gi|344232148|gb|EGV64027.1| multiple RNA-binding domain-containing protein 1 [Candida tenuis
ATCC 10573]
Length = 840
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
RGFAFVE+ +EA+NA+ L HL GR L+
Sbjct: 756 RGFAFVEFSLLKEAENAMNQLEGVHLLGRRLVMD 789
>gi|332664392|ref|YP_004447180.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332333206|gb|AEE50307.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 130
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G +GF FVE EA NA+E L N+ L GR ++ A D+
Sbjct: 39 GRSKGFGFVEMPNDDEALNAIEGLDNSDLDGRTIVAKKAEDR 80
>gi|123339809|ref|XP_001294506.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121872526|gb|EAX81576.1| hypothetical protein TVAG_514790 [Trichomonas vaginalis G3]
Length = 366
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL-IFSVAHDQIISI 49
G H+GF FV++ T QE +A+E L+N + +GR L IF +++I+ +
Sbjct: 142 GVHKGFGFVKFSTYQECLSAIEKLNNVNAWGRPLRIFEAENNRILGV 188
>gi|68369596|ref|XP_685178.1| PREDICTED: APOBEC1 complementation factor isoform 1 [Danio rerio]
Length = 594
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + TKQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSTKQEAKNAMKQLNNYEIRNGRLL 127
>gi|68369598|ref|XP_707799.1| PREDICTED: APOBEC1 complementation factor isoform 2 [Danio rerio]
Length = 586
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + TKQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSTKQEAKNAMKQLNNYEIRNGRLL 127
>gi|225684771|gb|EEH23055.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 167
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+AQ+A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDAQDAQDAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|123471866|ref|XP_001319130.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901906|gb|EAY06907.1| hypothetical protein TVAG_057010 [Trichomonas vaginalis G3]
Length = 279
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
N RGF F+EY TK+ AQNA E L L R L +A
Sbjct: 61 NLRGFGFIEYETKEAAQNACEQLDTATLSNRQLRCEIA 98
>gi|256092948|ref|XP_002582139.1| rna binding motif protein [Schistosoma mansoni]
gi|353228818|emb|CCD74989.1| putative rna binding motif protein [Schistosoma mansoni]
Length = 692
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 6 HRGFAFVEYVTKQEAQNALEALS-NTHLYGRHLIFSVA 42
HRGFAFVE+ T +A+ ALE L +THL GR L+ A
Sbjct: 653 HRGFAFVEFDTLDKAKIALETLGVSTHLLGRRLLMEYA 690
>gi|341877935|gb|EGT33870.1| hypothetical protein CAEBREN_20987 [Caenorhabditis brenneri]
Length = 528
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G++RGFA + + +EAQ A E L+N L GR++ S+ D + P + E +
Sbjct: 260 GDNRGFAVISFKNSEEAQKACEQLNNFELAGRNIRLSIKQDAV-----PQHKKEEASIHQ 314
Query: 64 ESLEELRAR 72
SL+++ R
Sbjct: 315 RSLDDIGDR 323
>gi|302038618|ref|YP_003798940.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
gi|300606682|emb|CBK43015.1| putative RNA-binding protein RbpA [Candidatus Nitrospira
defluvii]
Length = 108
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FVE + EAQ A+ AL+ T + GR L + A Q
Sbjct: 41 GQSRGFGFVEMASSDEAQKAISALNGTDMGGRTLTVNEARPQ 82
>gi|357440891|ref|XP_003590723.1| Polyadenylate-binding protein [Medicago truncatula]
gi|217072228|gb|ACJ84474.1| unknown [Medicago truncatula]
gi|355479771|gb|AES60974.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 187
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V QNAL L+ T L+GR L S
Sbjct: 129 KFGQPKGFAYVEFVEADAVQNAL-ILNETELHGRQLKVS 166
>gi|226531406|ref|NP_001151901.1| ATP binding protein [Zea mays]
gi|195650797|gb|ACG44866.1| ATP binding protein [Zea mays]
gi|223948927|gb|ACN28547.1| unknown [Zea mays]
gi|414867508|tpg|DAA46065.1| TPA: ATP binding protein [Zea mays]
Length = 167
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
K G RG+AFV+Y TK+EAQ A E ++ + GR ++ +A
Sbjct: 52 KRGEPRGYAFVQYTTKEEAQLAKEKMNGKLICGRPMVVHLA 92
>gi|221061067|ref|XP_002262103.1| cyclophilin [Plasmodium knowlesi strain H]
gi|193811253|emb|CAQ41981.1| cyclophilin, putative [Plasmodium knowlesi strain H]
Length = 127
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-------QVME 58
+RGFAFVEYV K +A++AL ++N L G+ + + + ++ + P + + M+
Sbjct: 48 NRGFAFVEYVEKDDAKHALYNMNNFELNGKRIYVNYSRNKKMEQYKPVWIDDLYNQEKMK 107
Query: 59 RAKEGES 65
+ +EG S
Sbjct: 108 QMEEGNS 114
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ T ++A A++ ++++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFETAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 88
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
G HRGF FVEY K++A A++ + N L+GR + V + Q + I
Sbjct: 56 GTHRGFGFVEYEEKEDAAAAIDNMHNAELFGR--VLKVNYAQPMKI 99
>gi|222613180|gb|EEE51312.1| hypothetical protein OsJ_32272 [Oryza sativa Japonica Group]
Length = 167
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
K G RG+AFV+Y TK+EAQ A E ++ + GR ++ +A ++
Sbjct: 52 KRGEPRGYAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHLASEKC 96
>gi|218184933|gb|EEC67360.1| hypothetical protein OsI_34460 [Oryza sativa Indica Group]
Length = 167
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
K G RG+AFV+Y TK+EAQ A E ++ + GR ++ +A ++
Sbjct: 52 KRGEPRGYAFVQYTTKEEAQLAKEKMNGRLVCGRPVVVHLASEKC 96
>gi|413934108|gb|AFW68659.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 270
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
GN RGF FV Y + + + A+EA++N HL R + S A+
Sbjct: 64 GNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAY 103
>gi|373459057|ref|ZP_09550824.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371720721|gb|EHO42492.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 97
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV +++EAQNA++ ++NT L GR L+ + A +
Sbjct: 39 GELRGFGFVTMESEEEAQNAIDNINNTELGGRTLVVNKARPR 80
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV Y + +EA +A++AL L+GR + + A+D+
Sbjct: 81 GRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|448878419|gb|AGE46172.1| arginine/serine-rich splicing factor SC37 transcript III
[Physcomitrella patens subsp. patens]
Length = 257
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGFAFV Y EAQ A+E L + GRH++ A
Sbjct: 54 GESRGFAFVRYKYADEAQKAIERLDGREVDGRHIVVQFA 92
>gi|217074200|gb|ACJ85460.1| unknown [Medicago truncatula]
gi|388522377|gb|AFK49250.1| unknown [Medicago truncatula]
Length = 217
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V QNAL L+ T L+GR L S
Sbjct: 129 KFGQPKGFAYVEFVEADAVQNAL-ILNETELHGRQLKVS 166
>gi|149241847|ref|XP_001526367.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450490|gb|EDK44746.1| multiple RNA-binding domain-containing protein 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 868
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAF+E+ +EA+NA+ L HL GR L+ A
Sbjct: 784 RGFAFIEFNLLKEAENAMTQLEGVHLLGRRLVMQYAE 820
>gi|328354024|emb|CCA40421.1| Multiple RNA-binding domain-containing protein 1 [Komagataella
pastoris CBS 7435]
Length = 834
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A++ L HL GR L+ A
Sbjct: 750 RGFAFVEFSLLKEAEQAMDQLQGVHLLGRRLVMEYAQ 786
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV Y + +EA +A++AL L+GR + + A+D+
Sbjct: 81 GRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|449456323|ref|XP_004145899.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
gi|449497265|ref|XP_004160356.1| PREDICTED: probable RNA-binding protein 18-like [Cucumis sativus]
Length = 171
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
K G RGFAF+EY +K+EA+ A E + GR L+ +A +++++
Sbjct: 52 KRGEPRGFAFIEYSSKEEAKLAKEKMHGKLACGRPLVVRLASEKLMT 98
>gi|388491050|gb|AFK33591.1| unknown [Medicago truncatula]
Length = 179
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ T L+GR L S + +
Sbjct: 105 KFGQPKGFAYVEFVEADAVQNAL-ILNETELHGRQLKVSAKRTNVPGL 151
>gi|254574096|ref|XP_002494157.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
gi|238033956|emb|CAY71978.1| Essential conserved protein that is part of the 90S preribosome
[Komagataella pastoris GS115]
Length = 810
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A++ L HL GR L+ A
Sbjct: 726 RGFAFVEFSLLKEAEQAMDQLQGVHLLGRRLVMEYAQ 762
>gi|353240961|emb|CCA72804.1| hypothetical protein PIIN_06740 [Piriformospora indica DSM 11827]
Length = 128
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G HRGFAFV + T +AQ+A++ + L G+ L S+A Q
Sbjct: 36 GKHRGFAFVTFGTPADAQDAIDNMDMNELRGKVLKVSMAKPQ 77
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ---IISIIAP 52
GNH+GF F++Y + A+ ++ +S+ L GR L + A DQ +S++ P
Sbjct: 465 GNHKGFGFIQYAQESVARTVIDTMSSFELAGRTLRVAWAQDQSKPALSVLPP 516
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G H+GF F+EYV + A AL A++ L GR
Sbjct: 325 GRHKGFCFIEYVDVKSADAALRAMNGFELAGR 356
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|68076357|ref|XP_680098.1| cyclophilin [Plasmodium berghei strain ANKA]
gi|56500983|emb|CAH98215.1| cyclophilin, putative [Plasmodium berghei]
Length = 134
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
HRGFAF+EYV K +A++AL +SN L G+
Sbjct: 47 HRGFAFIEYVEKDDAKHALYNMSNFELNGK 76
>gi|303275063|ref|XP_003056831.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461183|gb|EEH58476.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 96
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGFAFV ++ K EA++A++A++ + GR + + A +
Sbjct: 49 GNSRGFAFVRFIDKNEAEDAIKAMNEKEIEGRAIRVAFAEEP 90
>gi|156102883|ref|XP_001617134.1| cyclophilin E [Plasmodium vivax Sal-1]
gi|148806008|gb|EDL47407.1| cyclophilin E, putative [Plasmodium vivax]
Length = 124
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-------QVME 58
+RGFAFVEYV K +A++AL ++N L G+ + + + ++ + P + + M+
Sbjct: 48 NRGFAFVEYVEKDDAKHALYNMNNFELNGKKIYVNYSKNRKMEQYKPVWIDDLYNQEKMK 107
Query: 59 RAKEGES 65
+ +EG S
Sbjct: 108 QMEEGNS 114
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora
indica DSM 11827]
Length = 236
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y +++EA NA+ L+ T L GR + ++A+
Sbjct: 41 GRSRGFGFVTYSSEEEASNAISGLNETSLDGRQIKVNLAN 80
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV + T ++AQ ALE+L L GR L S+A
Sbjct: 293 GRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLA 331
>gi|156540750|ref|XP_001599717.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like, partial
[Nasonia vitripennis]
Length = 247
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII------SIIAPTFQVMER 59
HRGFAF+E+ ++A +A++ ++++ L+GR + ++A Q I + A + E
Sbjct: 36 HRGFAFIEFEAAEDAASAIDNMNDSELFGRTIRVNIAKPQKIKEGSSKPVWADDVWLQEH 95
Query: 60 AKEGESLEELRARTAAQFTDEVN--GFQNS 87
A GE+L T+A D+ N G QN
Sbjct: 96 A--GETL-NTGDETSASKDDDPNKKGKQNP 122
>gi|443715198|gb|ELU07293.1| hypothetical protein CAPTEDRAFT_153839 [Capitella teleta]
Length = 291
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGFAFVE+ T ++ A++ +++ LYGR + ++A Q
Sbjct: 26 HRGFAFVEFETVEDCSAAIDNMNDAELYGRTIRVNLAKPQ 65
>gi|302143805|emb|CBI22666.3| unnamed protein product [Vitis vinifera]
Length = 188
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
K G RGFAFVE+ TK+EA+ A E + + GR L +A+++
Sbjct: 70 KRGEPRGFAFVEFSTKEEAELAKEKMHGKLICGRPLTVRLANEK 113
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF------QVM 57
G RGF FV + T Q+A+ AL+A+ L GR L S+A + P+ +
Sbjct: 250 GRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPSTAQSQQEKTA 309
Query: 58 ERAKEGESLEELRARTAAQFTDEV 81
R E E + T+ QF E+
Sbjct: 310 SRGSEAEPQVDNNTSTSGQFGGEM 333
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|395820778|ref|XP_003783737.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Otolemur garnettii]
Length = 217
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K AQN A++NT L+GR + S+A D
Sbjct: 51 KGVAFILFLDKDSAQNCTRAINNTQLFGRKMKASIAID 88
>gi|389742753|gb|EIM83939.1| RNA-binding domain-containing protein, partial [Stereum hirsutum
FP-91666 SS1]
Length = 183
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFVEYV +A+ AL + L GR L+ + AH
Sbjct: 86 GKPRGYAFVEYVDPADAERALTKAHDKLLRGRRLVVTFAH 125
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G RGFAFV Y+ K++A A++ L T GR L
Sbjct: 37 MRTGEPRGFAFVRYLDKRDADYAVDRLDGTRFNGREL 73
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus
humanus corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus
humanus corporis]
Length = 158
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNLAKPQKI 88
>gi|448521115|ref|XP_003868429.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis Co 90-125]
gi|380352769|emb|CCG25525.1| hypothetical protein CORT_0C01480 [Candida orthopsilosis]
Length = 819
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE+ +EA++A++ L HL GR L+ A
Sbjct: 736 RGFAFVEFNLLKEAEDAMKQLEGVHLLGRRLVMQYA 771
>gi|354545488|emb|CCE42216.1| hypothetical protein CPAR2_807650 [Candida parapsilosis]
Length = 819
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFVE+ +E +NA++ L HL GR L+ A
Sbjct: 736 RGFAFVEFNLLKETENAMKQLEGVHLLGRRLVMQYA 771
>gi|373459913|ref|ZP_09551680.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371721577|gb|EHO43348.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 99
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV + EAQNA++ ++NT L GR L+ + A
Sbjct: 39 GELRGFGFVTMESDDEAQNAIDNINNTDLGGRTLVVNKAR 78
>gi|295662863|ref|XP_002791985.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279637|gb|EEH35203.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 152
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A++A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDAQDAKDAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|440797137|gb|ELR18232.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 167
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
K G +GF FVE+ TKQEAQ A E + GR L+ ++++
Sbjct: 43 KRGEPKGFCFVEFATKQEAQTAKERANGRMFLGRPLVVRFVDEKVL 88
>gi|336260313|ref|XP_003344952.1| apoptosis regulation protein [Sordaria macrospora k-hell]
gi|380095025|emb|CCC07527.1| putative apoptosis regulation protein [Sordaria macrospora k-hell]
Length = 145
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 17/69 (24%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEGES 65
HRGFA+VEY +++A+ A++ + + L+GR + S A ++ + AKEG
Sbjct: 52 HRGFAYVEYEDEEDAKEAIDNMDQSELFGRVIRVSAA------------KIPKSAKEG-- 97
Query: 66 LEELRARTA 74
L +RTA
Sbjct: 98 ---LGSRTA 103
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 80 HRGFAFIEFESAEDAATAIDNMNDSELFGRTIRVNIAKPQKI 121
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y + +E +NA+++L+ L GR + SVA
Sbjct: 234 GRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAE 273
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
K G H+G+ FV + K+EA A+E +NT L R LI S+A
Sbjct: 873 KKGTHKGYGFVTFSAKEEALAAVEGANNTQLKYRTLIISIA 913
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV + T ++AQ ALE+L L GR L S+A
Sbjct: 249 GRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLA 287
>gi|429961636|gb|ELA41181.1| hypothetical protein VICG_01780 [Vittaforma corneae ATCC 50505]
Length = 263
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEAL-SNTHLYGRHLIFSVA 42
G HRGFAF+ + + +A+E S+THLYGR L+ A
Sbjct: 222 GTHRGFAFIVLDSPRHVDDAIEYFSSSTHLYGRRLVLEKA 261
>gi|400600905|gb|EJP68573.1| pre-mRNA splicing factor cwc2 [Beauveria bassiana ARSEF 2860]
Length = 405
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI--IAPTFQVMERAKE 62
N RG AFV Y + AQ A EA+++ S+ HD+II++ P M +A+E
Sbjct: 210 NSRGVAFVTYSNEANAQFAKEAMAHQ---------SLDHDEIINVRWATPDPNPMAKARE 260
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE +R +F E+ G + K+RK
Sbjct: 261 ARRIEEQAAEAIRRALGGEFVAEIEG--KDPEARKRRK 296
>gi|299117380|emb|CBN75336.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 281
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 20/36 (55%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
+ G RGF FVEY +A A+ AL LYGR L
Sbjct: 165 RLGEPRGFCFVEYSNVDDAAKAIRALHGRKLYGRPL 200
>gi|160331548|ref|XP_001712481.1| pab2 [Hemiselmis andersenii]
gi|159765929|gb|ABW98156.1| pab2 [Hemiselmis andersenii]
Length = 524
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
H+GFAF+E+ +EA+ A+ + N HL+ RHL ++ +
Sbjct: 485 HKGFAFIEFEKIEEAKKAVLSTQNVHLFSRHLCVNLLKN 523
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAP-TFQVMERAKE 62
G RGF FV + T ++A++ALE+++ + GR L ++A Q S I+P F E +
Sbjct: 256 GKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAAGQ--SPISPAAFPRTENTID 313
Query: 63 GESL 66
G+ L
Sbjct: 314 GKEL 317
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A A++ + ++ LYGR L ++A
Sbjct: 48 HRGFAFIEYEEPRDAAAAIDNMHDSELYGRTLRVNLA 84
>gi|198427368|ref|XP_002127424.1| PREDICTED: similar to RNA binding motif protein 18 [Ciona
intestinalis]
Length = 204
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPT 53
G RGF+FV + TK++A+ A++ L+ + + LI AH+Q I P+
Sbjct: 69 GLSRGFSFVTFETKKDAEKAIKILNGKQVLSKKLIARWAHEQPIIPTKPS 118
>gi|325093178|gb|EGC46488.1| nuclear cap-binding protein [Ajellomyces capsulatus H88]
Length = 154
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 25/34 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +G+AFV++ T ++A+ AL +L+NT + GR +
Sbjct: 489 GRPKGYAFVDFATAEDAKEALNSLNNTEIEGRTI 522
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
K GN RG A+VE+ T+ EA ALE T + GR ++
Sbjct: 401 KDGNSRGMAYVEFKTEAEADKALEEKQGTEIEGRAVVI 438
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAK 61
G RGF +VEY A+ A EA +T L GR + A + + AP + RA+
Sbjct: 263 GRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPRDANSQAPREKAQTRAR 320
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV +V + A A+ L+ L GR+++ SVA D+
Sbjct: 41 GRSRGFGFVTFVDQSSANAAVSELNGKDLDGRNIVVSVAEDK 82
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGF FV Y + + + A+EA++N HL R + S A+ +
Sbjct: 151 GNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKK 192
>gi|448878411|gb|AGE46168.1| arginine/serine-rich splicing factor SC39 transcript II
[Physcomitrella patens subsp. patens]
Length = 167
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 11/93 (11%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI--FSVAHDQI----ISIIAPTFQVM 57
G RGFAFV Y EAQ A+E L + GR+++ F A + IS +AP +
Sbjct: 54 GESRGFAFVRYKYSDEAQKAIERLDGRAVDGRNIVDLFGCASGVVGLRHISGVAPELCWL 113
Query: 58 ERAKEGESLEELRARTAAQFTDEVNGFQNSTKL 90
A G + A AA F G + + KL
Sbjct: 114 VAADLGTA-----ALPAAGFLGVTWGGEFAVKL 141
>gi|85110543|ref|XP_963511.1| hypothetical protein NCU06739 [Neurospora crassa OR74A]
gi|28881366|emb|CAD70408.1| related to cyclophilin [Neurospora crassa]
gi|28925194|gb|EAA34275.1| hypothetical protein NCU06739 [Neurospora crassa OR74A]
Length = 145
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VEY +++A+ A++ + + L+GR + S A
Sbjct: 52 HRGFAYVEYEDEEDAKEAIDNMDQSELFGRVIRVSAA 88
>gi|351694309|gb|EHA97227.1| Putative RNA-binding protein 18 [Heterocephalus glaber]
Length = 190
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH QI
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQI 108
>gi|225563226|gb|EEH11505.1| nuclear cap-binding protein [Ajellomyces capsulatus G186AR]
Length = 154
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|223993321|ref|XP_002286344.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977659|gb|EED95985.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G H+GFAF+E+V +A A+ + + L+G+ L +VA
Sbjct: 49 GTHKGFAFLEFVEADDANEAIYNMDGSELFGKSLTVNVAQ 88
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN RGF FVE V ++A+ A+E L+ +L GR+++
Sbjct: 41 GNSRGFGFVEMVNDEDAKKAIEKLNGYNLEGRNIV 75
>gi|345329742|ref|XP_003431414.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein
18-like [Ornithorhynchus anatinus]
Length = 190
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH QI
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQI 108
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ T ++A A++ +++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFETSEDAGAAVDNMNDAELFGRTIRVNLAKPQKI 88
>gi|348570154|ref|XP_003470862.1| PREDICTED: probable RNA-binding protein 18-like isoform 1 [Cavia
porcellus]
Length = 190
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH QI
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQI 108
>gi|336468490|gb|EGO56653.1| hypothetical protein NEUTE1DRAFT_138758 [Neurospora tetrasperma
FGSC 2508]
gi|350289245|gb|EGZ70470.1| hypothetical protein NEUTE2DRAFT_68809 [Neurospora tetrasperma
FGSC 2509]
Length = 145
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VEY +++A+ A++ + + L+GR + S A
Sbjct: 52 HRGFAYVEYEDEEDAKEAIDNMDQSELFGRVIRVSAA 88
>gi|154281705|ref|XP_001541665.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411844|gb|EDN07232.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 154
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEDPQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|313238973|emb|CBY13961.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFVEY +A +A++ + + L+GR L ++A
Sbjct: 47 HRGFAFVEYKETGDAASAMDNMDDAELFGRTLKVNIA 83
>gi|423225541|ref|ZP_17212008.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
gi|392632469|gb|EIY26429.1| hypothetical protein HMPREF1062_04194 [Bacteroides
cellulosilyticus CL02T12C19]
Length = 129
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE +E Q A++AL+ T G+++ SVA
Sbjct: 39 GRSRGFGFVEMPNDEEGQKAIDALNETEFEGKNIAISVAR 78
>gi|224539725|ref|ZP_03680264.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
gi|224518648|gb|EEF87753.1| hypothetical protein BACCELL_04634 [Bacteroides cellulosilyticus
DSM 14838]
Length = 130
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE +E Q A++AL+ T G+++ SVA
Sbjct: 39 GRSRGFGFVEMPNDEEGQKAIDALNETEFEGKNIAISVAR 78
>gi|333999539|ref|YP_004532151.1| RNA-binding protein [Treponema primitia ZAS-2]
gi|333738431|gb|AEF83921.1| RNA-binding protein [Treponema primitia ZAS-2]
Length = 89
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN +GF FVE T++EAQ A+ ++T L GR + + A D+
Sbjct: 41 GNSKGFGFVEMSTEEEAQAAIRGTNSTDLDGRSIKVNEAMDK 82
>gi|241315296|ref|XP_002408027.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497243|gb|EEC06737.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 509
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAK 61
H+GFAFVEY + AQ ALE ++ + GR++ V + AP Q+ME AK
Sbjct: 115 HKGFAFVEYELPEAAQLALEQMNGVLIGGRNI--KVGRPSNMPQAAPILDQIMEEAK 169
>gi|388583201|gb|EIM23503.1| hypothetical protein WALSEDRAFT_67167 [Wallemia sebi CBS 633.66]
Length = 89
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y +EA +ALE+++ L GR + + AH
Sbjct: 43 GRSRGFGFVTYANDREASSALESMNEVELDGRRIRVNYAH 82
>gi|290980880|ref|XP_002673159.1| predicted protein [Naegleria gruberi]
gi|284086741|gb|EFC40415.1| predicted protein [Naegleria gruberi]
Length = 173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
HRG+AFVE+ ++A +ALE L+N L+GR
Sbjct: 80 HRGYAFVEFELPEDATDALENLNNGELFGR 109
>gi|359490617|ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
Length = 218
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
K G RGFAFVE+ TK+EA+ A E + + GR L +A+++
Sbjct: 100 KRGEPRGFAFVEFSTKEEAELAKEKMHGKLICGRPLTVRLANEK 143
>gi|296812543|ref|XP_002846609.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS
113480]
gi|238841865|gb|EEQ31527.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS
113480]
Length = 155
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF ++E+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYIEFELPQDAKEAIDNMDQSELYGRTIKVAAAKPQ 91
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y + QEA++A+ L++ L GR + ++A+
Sbjct: 42 GRSRGFGFVTYSSTQEAESAISGLNDQDLDGRRIKVNIAN 81
>gi|154338565|ref|XP_001565507.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062556|emb|CAM42420.1| hypothetical protein, conserved [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 681
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG AFV++ + + A+NA++AL+ TH+ G + VA+ +
Sbjct: 270 GRSRGIAFVKFKSIEHAENAVDALNGTHINGHQITVRVANSR 311
>gi|326469666|gb|EGD93675.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS
112818]
gi|326478803|gb|EGE02813.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Trichophyton
equinum CBS 127.97]
Length = 152
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF ++E+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYIEFELPQDAKEAIDNMDQSELYGRTIKVAAAKPQ 91
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+ FV Y TK E AL + N L GR L S+A +
Sbjct: 242 GKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGK 283
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans
isomerase E-like [Apis florea]
Length = 293
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 88
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G G+ F+ Y+TK+EA+ A+ AL L GR L ++ ++
Sbjct: 221 GKTTGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEKKV 263
>gi|315050730|ref|XP_003174739.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
gi|311340054|gb|EFQ99256.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF ++E+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYIEFELPQDAKEAIDNMDQSELYGRTIKVAAAKPQ 91
>gi|121715928|ref|XP_001275573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
gi|119403730|gb|EAW14147.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
Length = 152
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFDLPQDAAEAIDNMDGSELYGRTIKVAAAKPQ 91
>gi|426192453|gb|EKV42389.1| hypothetical protein AGABI2DRAFT_228803 [Agaricus bisporus var.
bisporus H97]
Length = 443
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G +GFAFV+++ + A +AL N HL GR L+ A + + AP ++ EG
Sbjct: 294 GKCKGFAFVDFLNTEHATSALVNPKNHHLNGRDLVVEYASAEAVRRGAPKTPKIKSPVEG 353
>gi|195435065|ref|XP_002065522.1| GK14626 [Drosophila willistoni]
gi|194161607|gb|EDW76508.1| GK14626 [Drosophila willistoni]
Length = 203
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 66 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 102
>gi|302659230|ref|XP_003021308.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
gi|291185200|gb|EFE40690.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
Length = 152
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF ++E+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYIEFELPQDAKEAIDNMDQSELYGRTIKVAAAKPQ 91
>gi|313245429|emb|CBY40163.1| unnamed protein product [Oikopleura dioica]
Length = 94
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFVEY +A +A++ + + L+GR L ++A
Sbjct: 47 HRGFAFVEYKETGDAASAMDNMDDAELFGRTLKVNIA 83
>gi|393216824|gb|EJD02314.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 157
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
HRGFAFV Y + +AQ+A++ + L GR L ++A Q ++
Sbjct: 56 HRGFAFVTYTSSGDAQDAIDNMDMNELRGRVLRVNLARPQKLT 98
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 85 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 126
>gi|344245091|gb|EGW01195.1| APOBEC1 complementation factor [Cricetulus griseus]
Length = 1001
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|340371235|ref|XP_003384151.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Amphimedon
queenslandica]
Length = 306
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAFVE+ ++A A++ + N+ ++GR + ++A +++
Sbjct: 50 HRGFAFVEFEATEDAAAAIDNMDNSEIFGRTIRVNIARPKML 91
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV + T ++AQ ALE+L L GR L S+A
Sbjct: 249 GRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLRLSLA 287
>gi|350592917|ref|XP_001925737.4| PREDICTED: APOBEC1 complementation factor isoform 1 [Sus scrofa]
Length = 662
Score = 38.9 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|68468570|ref|XP_721604.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
gi|46443527|gb|EAL02808.1| hypothetical protein CaO19.9215 [Candida albicans SC5314]
Length = 845
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A+ L HL GR L+ A
Sbjct: 757 RGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAE 793
>gi|241952837|ref|XP_002419140.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
gi|223642480|emb|CAX42729.1| multiple RNA-binding domain-containing protein, putative [Candida
dubliniensis CD36]
Length = 846
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A+ L HL GR L+ A
Sbjct: 758 RGFAFVEFNLMKEAETAMNQLEGVHLLGRRLVMQYAE 794
>gi|238880627|gb|EEQ44265.1| multiple RNA-binding domain-containing protein 1 [Candida albicans
WO-1]
Length = 845
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A+ L HL GR L+ A
Sbjct: 757 RGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAE 793
>gi|68468327|ref|XP_721723.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
gi|74680318|sp|Q5AJS6.1|MRD1_CANAL RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|46443655|gb|EAL02935.1| hypothetical protein CaO19.1646 [Candida albicans SC5314]
Length = 841
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A+ L HL GR L+ A
Sbjct: 757 RGFAFVEFNLMKEAETAMSQLEGVHLLGRRLVMQYAE 793
>gi|170041667|ref|XP_001848576.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
gi|167865236|gb|EDS28619.1| serine/arginine rich splicing factor [Culex quinquefasciatus]
Length = 186
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++AQ+AL+A+ L GR L +A
Sbjct: 56 RGFAFVRFYDKRDAQDALDAMDGRMLDGRELRVQMAR 92
>gi|302674160|ref|XP_003026765.1| hypothetical protein SCHCODRAFT_238363 [Schizophyllum commune H4-8]
gi|300100449|gb|EFI91862.1| hypothetical protein SCHCODRAFT_238363 [Schizophyllum commune H4-8]
Length = 355
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+AFVEY +EA NAL A + L GR L+ V H Q
Sbjct: 76 GKPRGYAFVEYAHAEEATNALTATHDRLLRGRRLV--VTHAQ 115
>gi|255726322|ref|XP_002548087.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
gi|240134011|gb|EER33566.1| multiple RNA-binding domain-containing protein 1 [Candida
tropicalis MYA-3404]
Length = 846
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFVE+ +EA+ A+ L HL GR L+ A
Sbjct: 759 RGFAFVEFNLMKEAETAMNQLEGVHLLGRRLVMQYAE 795
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y T +EAQ A++ L++ +GR L S A
Sbjct: 264 GRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQ 303
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FVE +A++A+EAL+++ L GR+++ + A
Sbjct: 41 GRSRGFGFVEMENSADAKSAIEALNDSELKGRNIVVNEA 79
>gi|428185150|gb|EKX54003.1| hypothetical protein GUITHDRAFT_132430 [Guillardia theta CCMP2712]
Length = 162
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAF+ + +K+ A A AL+ + L GR + S A D+
Sbjct: 97 GRSRGFAFITFSSKEAASQACSALNESDLGGRTVKVSFAKDR 138
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G +GF FV Y T +EA +A++AL LYGR + + A+++
Sbjct: 82 GRSKGFGFVTYNTVEEASSAIQALDGQDLYGRRVGVNFANER 123
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF------QVM 57
G RGF FV + T Q+A+ AL+A+ L GR L S+A + P+ +
Sbjct: 250 GRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPSTAQSQQEKTA 309
Query: 58 ERAKEGESLEELRARTAAQFTDEV 81
R E E + T+ QF E+
Sbjct: 310 SRGSEAEPQVDNNTITSGQFGGEM 333
>gi|406952399|gb|EKD82023.1| hypothetical protein ACD_39C01519G0004 [uncultured bacterium]
Length = 83
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FVE+ AQ A++ +++ + GR L S+A +Q+
Sbjct: 41 GRSRGYGFVEFTDPGSAQAAVDGMNDQPIEGRKLTVSLAKNQV 83
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 115 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 156
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E + AL++L+ L GR L S+A
Sbjct: 236 GKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLA 274
>gi|50757137|ref|XP_415396.1| PREDICTED: probable RNA-binding protein 18 [Gallus gallus]
Length = 190
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|358419077|ref|XP_003584119.1| PREDICTED: APOBEC1 complementation factor [Bos taurus]
Length = 461
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|440906625|gb|ELR56865.1| Putative RNA-binding protein 18 [Bos grunniens mutus]
Length = 190
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ T L+GR L S I +
Sbjct: 143 KFGQPKGFAYVEFVEIDAVQNAL-LLNETELHGRQLKVSAKRTNIPGM 189
>gi|239608856|gb|EEQ85843.1| RNP domain-containing protein [Ajellomyces dermatitidis ER-3]
Length = 534
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T++EAQNA+ LSN +L GR
Sbjct: 197 GMSKGCGIVEYATREEAQNAVATLSNQNLMGR 228
>gi|449266622|gb|EMC77664.1| putative RNA-binding protein 46, partial [Columba livia]
Length = 467
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A++ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIKFLNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRARTAAQFTDEVNGFQNSTKLSKKR 94
K+ E L E++ T +V + N+T +K R
Sbjct: 151 EKKKDEILNEMKKVTEG--VVDVIVYPNATDKTKNR 184
>gi|73968250|ref|XP_548474.2| PREDICTED: probable RNA-binding protein 18 [Canis lupus familiaris]
gi|149738072|ref|XP_001504763.1| PREDICTED: probable RNA-binding protein 18-like [Equus caballus]
gi|301760408|ref|XP_002915995.1| PREDICTED: probable RNA-binding protein 18-like [Ailuropoda
melanoleuca]
gi|281337699|gb|EFB13283.1| hypothetical protein PANDA_004029 [Ailuropoda melanoleuca]
gi|417396779|gb|JAA45423.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 190
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|344241261|gb|EGV97364.1| putative RNA-binding protein 18 [Cricetulus griseus]
Length = 164
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 40 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 82
>gi|194761376|ref|XP_001962905.1| GF15672 [Drosophila ananassae]
gi|190616602|gb|EDV32126.1| GF15672 [Drosophila ananassae]
Length = 199
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 61 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 97
>gi|157125941|ref|XP_001654458.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|157125943|ref|XP_001654459.1| serine/arginine rich splicing factor [Aedes aegypti]
gi|94469018|gb|ABF18358.1| predicted splicing factor [Aedes aegypti]
gi|108873468|gb|EAT37693.1| AAEL010340-PA [Aedes aegypti]
gi|108873469|gb|EAT37694.1| AAEL010340-PB [Aedes aegypti]
Length = 177
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++AQ+AL+A+ L GR L +A
Sbjct: 56 RGFAFVRFYDKRDAQDALDAMDGRMLDGRELRVQMAR 92
>gi|26331262|dbj|BAC29361.1| unnamed protein product [Mus musculus]
Length = 190
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|449268602|gb|EMC79458.1| putative RNA-binding protein 18 [Columba livia]
Length = 159
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 35 GQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQV 77
>gi|395501464|ref|XP_003755115.1| PREDICTED: APOBEC1 complementation factor [Sarcophilus harrisii]
Length = 593
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|344271979|ref|XP_003407814.1| PREDICTED: probable RNA-binding protein 18-like [Loxodonta
africana]
Length = 190
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 85 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 126
>gi|291408421|ref|XP_002720542.1| PREDICTED: RNA binding motif protein 18 [Oryctolagus cuniculus]
Length = 190
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|169774677|ref|XP_001821806.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
oryzae RIB40]
gi|238496735|ref|XP_002379603.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|83769669|dbj|BAE59804.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694483|gb|EED50827.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|391869782|gb|EIT78975.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
oryzae 3.042]
Length = 153
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEVPEDAKEAIDNMDGSELYGRTIKVAAAKPQ 91
>gi|13385930|ref|NP_080710.1| probable RNA-binding protein 18 isoform 1 [Mus musculus]
gi|81916775|sp|Q9CR83.1|RBM18_MOUSE RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|12842090|dbj|BAB25466.1| unnamed protein product [Mus musculus]
gi|12862070|dbj|BAB32344.1| unnamed protein product [Mus musculus]
gi|13529665|gb|AAH05540.1| RNA binding motif protein 18 [Mus musculus]
gi|26330626|dbj|BAC29043.1| unnamed protein product [Mus musculus]
gi|148676725|gb|EDL08672.1| RNA binding motif protein 18, isoform CRA_b [Mus musculus]
Length = 190
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|389586143|dbj|GAB68872.1| cyclophilin E [Plasmodium cynomolgi strain B]
Length = 126
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-------QVME 58
+RGFAFVEYV K +A++AL ++N L G+ + + + ++ + P + + M+
Sbjct: 48 NRGFAFVEYVEKDDAKHALYNMNNFELNGKKIHVNYSKNRKMEQYKPVWIDDLYNQEKMK 107
Query: 59 RAKEGES 65
+ +EG S
Sbjct: 108 QMEEGNS 114
>gi|14916461|ref|NP_149108.1| probable RNA-binding protein 18 [Homo sapiens]
gi|197102628|ref|NP_001126470.1| probable RNA-binding protein 18 [Pongo abelii]
gi|386780890|ref|NP_001247794.1| probable RNA-binding protein 18 [Macaca mulatta]
gi|55632227|ref|XP_520236.1| PREDICTED: uncharacterized protein LOC464711 isoform 2 [Pan
troglodytes]
gi|114626544|ref|XP_001136501.1| PREDICTED: uncharacterized protein LOC464711 isoform 1 [Pan
troglodytes]
gi|296190735|ref|XP_002743314.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Callithrix
jacchus]
gi|332229929|ref|XP_003264139.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Nomascus
leucogenys]
gi|332229931|ref|XP_003264140.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Nomascus
leucogenys]
gi|395824121|ref|XP_003785319.1| PREDICTED: probable RNA-binding protein 18 [Otolemur garnettii]
gi|397526515|ref|XP_003833168.1| PREDICTED: probable RNA-binding protein 18 [Pan paniscus]
gi|402896487|ref|XP_003911329.1| PREDICTED: probable RNA-binding protein 18 [Papio anubis]
gi|403266051|ref|XP_003925211.1| PREDICTED: probable RNA-binding protein 18 [Saimiri boliviensis
boliviensis]
gi|426362933|ref|XP_004048604.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Gorilla
gorilla gorilla]
gi|426362935|ref|XP_004048605.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Gorilla
gorilla gorilla]
gi|74762658|sp|Q96H35.1|RBM18_HUMAN RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|75070549|sp|Q5R6W3.1|RBM18_PONAB RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|14286288|gb|AAH08942.1| RNA binding motif protein 18 [Homo sapiens]
gi|17939516|gb|AAH19319.1| RNA binding motif protein 18 [Homo sapiens]
gi|55731580|emb|CAH92497.1| hypothetical protein [Pongo abelii]
gi|90082160|dbj|BAE90361.1| unnamed protein product [Macaca fascicularis]
gi|119607924|gb|EAW87518.1| RNA binding motif protein 18, isoform CRA_a [Homo sapiens]
gi|193786628|dbj|BAG51951.1| unnamed protein product [Homo sapiens]
gi|261859206|dbj|BAI46125.1| RNA binding motif protein 18 [synthetic construct]
gi|355567464|gb|EHH23805.1| RNA-binding motif protein 18 [Macaca mulatta]
gi|355753053|gb|EHH57099.1| RNA-binding motif protein 18 [Macaca fascicularis]
gi|380785643|gb|AFE64697.1| probable RNA-binding protein 18 [Macaca mulatta]
gi|383409843|gb|AFH28135.1| putative RNA-binding protein 18 [Macaca mulatta]
gi|384950330|gb|AFI38770.1| putative RNA-binding protein 18 [Macaca mulatta]
gi|410306632|gb|JAA31916.1| RNA binding motif protein 18 [Pan troglodytes]
gi|410332431|gb|JAA35162.1| RNA binding motif protein 18 [Pan troglodytes]
Length = 190
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|464252|sp|P20397.3|NUCL_XENLA RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|64937|emb|CAA44805.1| nucleolin [Xenopus laevis]
Length = 651
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 26/34 (76%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ + ++A++A+++ +NT + GR +
Sbjct: 448 GRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSI 481
>gi|440898350|gb|ELR49866.1| APOBEC1 complementation factor [Bos grunniens mutus]
Length = 595
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|289741385|gb|ADD19440.1| putative splicing factor [Glossina morsitans morsitans]
Length = 191
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 58 RGFAFVRFYDKRDAEDALEAMDGRKLDGRELRVQMAR 94
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV + T ++AQ ALEAL L GR L S+A
Sbjct: 247 GRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSLA 285
>gi|126272657|ref|XP_001363520.1| PREDICTED: APOBEC1 complementation factor isoform 1 [Monodelphis
domestica]
Length = 594
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|157821759|ref|NP_001101308.1| probable RNA-binding protein 18 [Rattus norvegicus]
gi|149038908|gb|EDL93128.1| RNA binding motif protein 18 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 190
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|355715633|gb|AES05390.1| RNA binding motif protein 18 [Mustela putorius furo]
Length = 189
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|195114806|ref|XP_002001958.1| GI17122 [Drosophila mojavensis]
gi|193912533|gb|EDW11400.1| GI17122 [Drosophila mojavensis]
Length = 203
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 65 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 101
>gi|145231672|ref|XP_001399311.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
niger CBS 513.88]
gi|134056213|emb|CAK96388.1| unnamed protein product [Aspergillus niger]
gi|350634306|gb|EHA22668.1| hypothetical protein ASPNIDRAFT_46906 [Aspergillus niger ATCC
1015]
gi|358365842|dbj|GAA82464.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
kawachii IFO 4308]
Length = 152
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFDLPEDAKEAIDNMDGSELYGRTIKVAAAKPQ 91
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGFAFV T Q AQ+A+++L+ T + GR ++ + A
Sbjct: 42 GQSRGFAFVTMETSQAAQSAIDSLNGTSISGRQIVVNEA 80
>gi|359079976|ref|XP_003587913.1| PREDICTED: APOBEC1 complementation factor [Bos taurus]
gi|296472873|tpg|DAA14988.1| TPA: apobec-1 complementation factor-like isoform 1 [Bos taurus]
Length = 595
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|90083158|dbj|BAE90661.1| unnamed protein product [Macaca fascicularis]
Length = 190
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAKE 62
H+GFAFVEY + AQ ALE ++N + GR++ V + AP Q+++ A++
Sbjct: 179 HKGFAFVEYEIPEAAQLALEQMNNVLMGGRNI--KVGRPSNVPQAAPWIEQILQEARQ 234
>gi|77735601|ref|NP_001029496.1| probable RNA-binding protein 18 [Bos taurus]
gi|426223094|ref|XP_004005714.1| PREDICTED: probable RNA-binding protein 18 [Ovis aries]
gi|118577827|sp|Q3ZCC5.1|RBM18_BOVIN RecName: Full=Probable RNA-binding protein 18; AltName:
Full=RNA-binding motif protein 18
gi|73587309|gb|AAI02519.1| RNA binding motif protein 18 [Bos taurus]
gi|296482270|tpg|DAA24385.1| TPA: probable RNA-binding protein 18 [Bos taurus]
Length = 190
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|225454892|ref|XP_002279148.1| PREDICTED: polyadenylate-binding protein 2-like [Vitis vinifera]
Length = 226
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ + L+GR L S I +
Sbjct: 134 KFGQPKGFAYVEFVEIDAVQNAL-LLNESELHGRQLKVSAKRTNIPGM 180
>gi|224073895|ref|XP_002188154.1| PREDICTED: probable RNA-binding protein 18 [Taeniopygia guttata]
Length = 223
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 99 GQPRGYCFVNFETKQEAEKAIQCLNGKLALSKKLVVRWAHAQV 141
>gi|444724031|gb|ELW64653.1| putative RNA-binding protein 18 [Tupaia chinensis]
Length = 155
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 31 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 73
>gi|395505635|ref|XP_003757145.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Sarcophilus
harrisii]
Length = 190
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|374290274|ref|YP_005037327.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
gi|358377066|gb|AEU09254.1| putative RNA-binding protein [Blattabacterium sp. (Cryptocercus
punctulatus) str. Cpu]
Length = 89
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
+GF F+E ++ A+ A+E L+ T GR++I SVA +I
Sbjct: 47 KGFGFIEMSNEENAKQAIEKLNGTEFMGRNIIVSVARPRI 86
>gi|81916405|sp|Q923K9.1|A1CF_RAT RecName: Full=APOBEC1 complementation factor; AltName:
Full=APOBEC1-stimulating protein
gi|15072439|gb|AAK50145.1| APOBEC-1 complementation factor long isoform [Rattus norvegicus]
Length = 594
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+ FV Y TK E AL + N L GR L S+A +
Sbjct: 242 GKFRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGK 283
>gi|354500649|ref|XP_003512411.1| PREDICTED: probable RNA-binding protein 18-like, partial
[Cricetulus griseus]
Length = 162
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 38 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 80
>gi|297490704|ref|XP_002698411.1| PREDICTED: APOBEC1 complementation factor isoform 2 [Bos taurus]
gi|296472874|tpg|DAA14989.1| TPA: apobec-1 complementation factor-like isoform 2 [Bos taurus]
Length = 587
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|197246835|gb|AAI68896.1| RNA binding motif protein 18 [Rattus norvegicus]
Length = 190
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|338716785|ref|XP_001501741.3| PREDICTED: APOBEC1 complementation factor isoform 1 [Equus
caballus]
Length = 597
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|126294195|ref|XP_001370439.1| PREDICTED: probable RNA-binding protein 18-like [Monodelphis
domestica]
Length = 189
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 65 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 107
>gi|121543726|gb|ABM55548.1| putative peptidyl-prolyl cis-trans isomerase E [Maconellicoccus
hirsutus]
Length = 291
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 8/77 (10%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII------SIIAPTFQVMER 59
HRGFAF+E+ ++A A++ ++ + L+GR + ++A Q + ++ A + +
Sbjct: 47 HRGFAFIEFEAPEDAAAAIDNMNESELFGRTMRVNLAKPQKVKEGSTKAVWADDSWLQKY 106
Query: 60 AKEGESLEELRARTAAQ 76
A G++ EEL+A T ++
Sbjct: 107 A--GKTEEELKAATESE 121
>gi|426252733|ref|XP_004020057.1| PREDICTED: APOBEC1 complementation factor isoform 2 [Ovis aries]
Length = 595
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|354490876|ref|XP_003507582.1| PREDICTED: APOBEC1 complementation factor-like [Cricetulus griseus]
Length = 592
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|345315973|ref|XP_001509329.2| PREDICTED: nucleolin-like, partial [Ornithorhynchus anatinus]
Length = 638
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +G+AFVE+ T +EA+ AL +L+N + GR +
Sbjct: 470 GRPKGYAFVEFSTPEEAKEALNSLNNVEIEGRTI 503
>gi|255932047|ref|XP_002557580.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582199|emb|CAP80372.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 152
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + +YGR + + A Q
Sbjct: 52 HRGFGYVEFDLPQDAKEAIDNMDGSEIYGRTIKVAAAKPQ 91
>gi|195401200|ref|XP_002059202.1| GJ16161 [Drosophila virilis]
gi|194156076|gb|EDW71260.1| GJ16161 [Drosophila virilis]
Length = 202
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 65 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 101
>gi|126272659|ref|XP_001363608.1| PREDICTED: APOBEC1 complementation factor isoform 2 [Monodelphis
domestica]
Length = 586
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|338716787|ref|XP_003363516.1| PREDICTED: APOBEC1 complementation factor isoform 2 [Equus
caballus]
Length = 589
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|148709768|gb|EDL41714.1| mCG1979, isoform CRA_b [Mus musculus]
Length = 767
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|449504773|ref|XP_002187149.2| PREDICTED: APOBEC1 complementation factor [Taeniopygia guttata]
Length = 581
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKTLNNYEIRNGRLL 127
>gi|431839024|gb|ELK00953.1| APOBEC1 complementation factor [Pteropus alecto]
Length = 543
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|426252731|ref|XP_004020056.1| PREDICTED: APOBEC1 complementation factor isoform 1 [Ovis aries]
Length = 587
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
GN +GF FV + +EAQNA++ L +T GR L S A
Sbjct: 267 GNSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQ 306
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV + T +EAQ A+E L ++ +GR L S A
Sbjct: 266 GQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQ 305
>gi|418530958|ref|ZP_13096878.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
gi|371452037|gb|EHN65069.1| RNA recognition motif-containing protein [Comamonas testosteroni
ATCC 11996]
Length = 83
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE T+++AQ A+E L++ L GR L ++A
Sbjct: 41 GRSRGFGFVEMGTQEQAQKAIETLNDQPLGGRALGVALAR 80
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans
isomerase E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFESAEDAAAAIDNMNDSELFGRTIRVNLAKPQRI 88
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAP 52
G RG+AFVE ++ + A+ A HL+G+H++ H + ++ P
Sbjct: 81 GQSRGYAFVEMESQHDVNAAIRACHGIHLHGQHILVDTEHGRTVTGWIP 129
>gi|261195254|ref|XP_002624031.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis SLH14081]
gi|239587903|gb|EEQ70546.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis SLH14081]
gi|239610607|gb|EEQ87594.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis ER-3]
gi|327348958|gb|EGE77815.1| nuclear cap-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 154
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEEAQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|66362632|ref|XP_628282.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|67590297|ref|XP_665474.1| dentin phosphoryn [Cryptosporidium hominis TU502]
gi|46229752|gb|EAK90570.1| splicing factor RRM domain containing protein; T22E16.120 SC35-like
splicing factor [Cryptosporidium parvum Iowa II]
gi|54656181|gb|EAL35244.1| dentin phosphoryn [Cryptosporidium hominis]
gi|323508677|dbj|BAJ77232.1| cgd7_940 [Cryptosporidium parvum]
gi|323510599|dbj|BAJ78193.1| cgd7_940 [Cryptosporidium parvum]
Length = 286
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGF FVEY+ ++AQ+A+ L + L G + VAHD+ S
Sbjct: 131 RGFGFVEYMDPRDAQDAVNRLDGSLLDGSTIRVVVAHDRRKS 172
>gi|410921712|ref|XP_003974327.1| PREDICTED: nucleolin-like isoform 1 [Takifugu rubripes]
Length = 680
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ T +A +ALE +NT + GR +
Sbjct: 470 GRPKGFAFVEFETVNDATDALENFNNTDIEGRSI 503
>gi|300708710|ref|XP_002996529.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
gi|239605838|gb|EEQ82858.1| hypothetical protein NCER_100368 [Nosema ceranae BRL01]
Length = 399
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEAL-SNTHLYGRHLIFSVAHD 44
G HRGFAFV + +K + +E +THLYGR L+ +A +
Sbjct: 358 GTHRGFAFVTFESKSVLDSVIEYFGKSTHLYGRRLVLEIAKE 399
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y + +E NA+++L+ L GR + SVA
Sbjct: 227 GRSRGFGFVTYSSAEEVDNAIDSLNGAELDGRAIRVSVAE 266
>gi|19173760|ref|NP_596891.1| APOBEC1 complementation factor [Rattus norvegicus]
gi|15077247|gb|AAK83095.1|AF290984_1 APOBEC-1 complementation factor short isoform [Rattus norvegicus]
Length = 586
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|302696625|ref|XP_003037991.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
gi|300111688|gb|EFJ03089.1| hypothetical protein SCHCODRAFT_47280 [Schizophyllum commune H4-8]
Length = 449
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G +GFAF+++ TK+ A+ AL N HL GR L A + + AP Q E+ +G
Sbjct: 279 GKCKGFAFIDFGTKEYAEEALINPRNHHLNGRDLQVEFASAEAVRRGAPR-QPAEKDADG 337
Query: 64 ESLEELRARTAA 75
+ ++A
Sbjct: 338 RPARPHKGKSAG 349
>gi|299529236|ref|ZP_07042680.1| RNA recognition motif-containing protein [Comamonas testosteroni
S44]
gi|298722760|gb|EFI63673.1| RNA recognition motif-containing protein [Comamonas testosteroni
S44]
Length = 83
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE T+++AQ A+E L++ L GR L ++A
Sbjct: 41 GRSRGFGFVEMGTQEQAQKAIETLNDQPLGGRALGVALAR 80
>gi|291231691|ref|XP_002735797.1| PREDICTED: poly-U binding splicing factor 60KDa-like [Saccoglossus
kowalevskii]
Length = 528
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAKE 62
H+GFAFVEY + AQ ALE ++ + GR++ V + P QVME AK+
Sbjct: 171 HKGFAFVEYDLPEAAQLALEQMNGVMIGGRNI--KVGRPSNMPQAQPIIDQVMEEAKQ 226
>gi|344274538|ref|XP_003409072.1| PREDICTED: APOBEC1 complementation factor [Loxodonta africana]
Length = 595
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|195035777|ref|XP_001989348.1| GH11678 [Drosophila grimshawi]
gi|193905348|gb|EDW04215.1| GH11678 [Drosophila grimshawi]
Length = 203
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|149062706|gb|EDM13129.1| apobec-1 complementation factor, isoform CRA_c [Rattus norvegicus]
Length = 586
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 85 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 119
>gi|425774154|gb|EKV12471.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum PHI26]
gi|425778407|gb|EKV16535.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum Pd1]
Length = 152
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + +YGR + + A Q
Sbjct: 52 HRGFGYVEFDLPQDAKEAIDNMDGSEIYGRTIKVAAAKPQ 91
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ ++A A++ ++++ L+GR + ++A Q I
Sbjct: 49 HRGFAFIEFENAEDAAAAIDNMNDSELFGRTIRVNIAAPQRI 90
>gi|255539953|ref|XP_002511041.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550156|gb|EEF51643.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 231
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ + L+GR L S I +
Sbjct: 140 KFGQPKGFAYVEFVEVDAVQNAL-LLNESELHGRQLKVSAKRTNIPGM 186
>gi|356529159|ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
Length = 157
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
K G RGFAF++Y TK+EA+ A E + R L+ +A D+ +
Sbjct: 50 KRGEPRGFAFIQYSTKEEAELAKEKMHGRLACSRPLVVRLAGDKCM 95
>gi|121719870|ref|XP_001276633.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
gi|119404845|gb|EAW15207.1| RNA binding domain protein [Aspergillus clavatus NRRL 1]
Length = 306
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
+ G RGFA E++ + AQ LE LS YGR L +H
Sbjct: 249 RTGQPRGFAHAEFIDAESAQKGLEILSRKSPYGRQLRLDYSH 290
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+ FV Y TK E AL + N L GR L S+A +
Sbjct: 344 GKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLAQGK 385
>gi|149062707|gb|EDM13130.1| apobec-1 complementation factor, isoform CRA_d [Rattus norvegicus]
Length = 578
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 85 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 119
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 240 GRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER 281
>gi|226423972|gb|ACO53091.1| MIP01221p [Drosophila melanogaster]
Length = 195
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|115384168|ref|XP_001208631.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196323|gb|EAU38023.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 132
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A+ A++ + + LYGR + + A Q
Sbjct: 31 HRGFGYVEFDLPEDAKEAIDNMDGSELYGRTIKVAAAKPQ 70
>gi|444512913|gb|ELV10212.1| APOBEC1 complementation factor [Tupaia chinensis]
Length = 598
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 96 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 130
>gi|345326219|ref|XP_001506578.2| PREDICTED: APOBEC1 complementation factor [Ornithorhynchus
anatinus]
Length = 655
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|291224278|ref|XP_002732132.1| PREDICTED: splicing factor, arginine/serine-rich 2-like
[Saccoglossus kowalevskii]
Length = 230
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFV Y K++A++AL+A+ L GR L +A
Sbjct: 55 RGFAFVRYYDKRDAEDALDAMDGATLDGRELRVQMA 90
>gi|195351055|ref|XP_002042052.1| GM26218 [Drosophila sechellia]
gi|195578745|ref|XP_002079224.1| GD22120 [Drosophila simulans]
gi|194123876|gb|EDW45919.1| GM26218 [Drosophila sechellia]
gi|194191233|gb|EDX04809.1| GD22120 [Drosophila simulans]
Length = 195
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|21358099|ref|NP_652612.1| SC35, isoform B [Drosophila melanogaster]
gi|320545008|ref|NP_001188794.1| SC35, isoform C [Drosophila melanogaster]
gi|386769542|ref|NP_001246005.1| SC35, isoform D [Drosophila melanogaster]
gi|7243688|gb|AAF43415.1|AF232775_1 SR family splicing factor SC35 [Drosophila melanogaster]
gi|7297948|gb|AAF53192.1| SC35, isoform B [Drosophila melanogaster]
gi|17862504|gb|AAL39729.1| LD32469p [Drosophila melanogaster]
gi|220944588|gb|ACL84837.1| SC35-PA [synthetic construct]
gi|220954528|gb|ACL89807.1| SC35-PA [synthetic construct]
gi|318068433|gb|ADV37044.1| SC35, isoform C [Drosophila melanogaster]
gi|383291463|gb|AFH03679.1| SC35, isoform D [Drosophila melanogaster]
Length = 195
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|340992759|gb|EGS23314.1| hypothetical protein CTHT_0009820 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 191
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y + +AQ A++A++N GR + A D
Sbjct: 40 GRSRGFGFVRYTNEADAQKAMDAMNNVEFDGRQIRVDKASD 80
>gi|258565461|ref|XP_002583475.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907176|gb|EEP81577.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 152
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFEMAQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV+Y +Q A++A+ L+ L GR + S++ D+
Sbjct: 173 GRPRGFGFVDYDNEQSAKDAVSNLNGMPLDGREISVSISEDK 214
>gi|427794969|gb|JAA62936.1| Putative polypyrimidine tract-binding protein puf60 rrm
superfamily, partial [Rhipicephalus pulchellus]
Length = 416
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAK 61
H+GFAFVEY + AQ ALE ++ + GR++ V + AP Q+ME AK
Sbjct: 194 HKGFAFVEYELPEAAQLALEQMNGVLIGGRNI--KVGRPSNMPQAAPILDQIMEEAK 248
>gi|261203825|ref|XP_002629126.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|239586911|gb|EEQ69554.1| RNP domain-containing protein [Ajellomyces dermatitidis SLH14081]
gi|327356167|gb|EGE85024.1| hypothetical protein BDDG_07969 [Ajellomyces dermatitidis ATCC
18188]
Length = 471
Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T++EAQNA+ LSN +L GR
Sbjct: 133 GMSKGCGIVEYATREEAQNAVATLSNQNLMGR 164
>gi|124487289|ref|NP_001074543.1| APOBEC1 complementation factor [Mus musculus]
gi|341940157|sp|Q5YD48.2|A1CF_MOUSE RecName: Full=APOBEC1 complementation factor; AltName:
Full=APOBEC1-stimulating protein
Length = 595
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ T +A +ALE +NT + GR +
Sbjct: 456 GRPKGFAFVEFETVNDATDALENFNNTDIEGRSI 489
>gi|406896127|gb|EKD40506.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 92
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G +GF FVE ++ EAQ+A+EAL+ + GR LI + A
Sbjct: 39 GQSKGFGFVEMDSQTEAQSAMEALNGKDVKGRTLIVNEA 77
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G G+ F+ Y+TK+EA+ A+ AL L GR L ++ ++
Sbjct: 221 GWATGYGFISYLTKEEAEAAISALDGKELMGRSLFLKISEKKV 263
>gi|396494938|ref|XP_003844425.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
gi|312221005|emb|CBY00946.1| hypothetical protein LEMA_P020760.1 [Leptosphaeria maculans JN3]
Length = 344
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G H+GF FVEY T++EA A + ++N LYG +
Sbjct: 53 GQHQGFGFVEYHTEEEADYAPKIMNNIALYGTRI 86
>gi|194861231|ref|XP_001969737.1| GG10262 [Drosophila erecta]
gi|190661604|gb|EDV58796.1| GG10262 [Drosophila erecta]
Length = 195
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 240 GRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER 281
>gi|50346315|gb|AAT74916.1| APOBEC-1 stimulating protein [Mus musculus]
Length = 595
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|374376206|ref|ZP_09633864.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
gi|373233046|gb|EHP52841.1| RNP-1 like RNA-binding protein [Niabella soli DSM 19437]
Length = 110
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 2 KFGNH-RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KF N +GF FVE T +EA+ A+EAL+ T + GR+++ +
Sbjct: 36 KFTNRSKGFGFVEMATDEEAKAAIEALNGTEVDGRNIVVN 75
>gi|408398680|gb|EKJ77809.1| hypothetical protein FPSE_02043 [Fusarium pseudograminearum
CS3096]
Length = 178
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y + +AQNA+ A++N GR++ A D
Sbjct: 40 GRSRGFGFVRYTQEGDAQNAIAAMNNVEFDGRNIRVDKASD 80
>gi|20067397|emb|CAC84501.1| putative nucleolin [Triturus carnifex]
Length = 338
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
G +GFA VEY K+ A+ A+E+ N + GRH+
Sbjct: 153 GRSQGFALVEYPNKKSARKAMESHKNVEIEGRHICL 188
>gi|268569468|ref|XP_002640530.1| Hypothetical protein CBG18692 [Caenorhabditis briggsae]
Length = 85
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFVEY +Q AQ A+ L+ GR L ++A+++
Sbjct: 43 GRPRGFAFVEYSDEQSAQRAVNELNGADFNGRQLRVNLANNR 84
>gi|195472373|ref|XP_002088475.1| GE12283 [Drosophila yakuba]
gi|194174576|gb|EDW88187.1| GE12283 [Drosophila yakuba]
Length = 217
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 87 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 123
>gi|50346317|gb|AAT74917.1| APOBEC-1 stimulating protein [Mus musculus]
Length = 587
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|448878220|gb|AGE46073.1| arginine/serine-rich splicing factor SC26 transcript II [Zea mays]
Length = 129
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+ RGFAFV Y + EAQ+A++ L GR L+ A P + + R +
Sbjct: 56 GDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAK------YGPNAEKIHRGRIT 109
Query: 64 ESLEELRARTAAQ 76
E + R R ++
Sbjct: 110 EENPKPRGRCRSR 122
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR--HLIFSVAHDQIISIIAPT 53
G +GFAF+E+ + +A++ALE +NT + GR L +S + D PT
Sbjct: 454 GRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRDWNRGNSGPT 505
>gi|339626955|ref|YP_004718598.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|379008663|ref|YP_005258114.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
gi|339284744|gb|AEJ38855.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus TPY]
gi|361054925|gb|AEW06442.1| RNP-1 like RNA-binding protein [Sulfobacillus acidophilus DSM
10332]
Length = 85
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE V Q+A+ A+EA++ T L GR +I + A
Sbjct: 41 GRSRGFGFVE-VADQDAEQAVEAMNGTQLGGRDIIVNEAR 79
>gi|348671204|gb|EGZ11025.1| hypothetical protein PHYSODRAFT_304700 [Phytophthora sojae]
Length = 987
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV+Y +A+ A+E L+ T L GR +I A
Sbjct: 389 LGRSRGFGFVQYRDVADARAAVEKLNGTKLKGREMIVDFA 428
>gi|27462520|gb|AAO15466.1|AF442134_1 APOBEC-1 complementation factor 45 kDa variant [Rattus norvegicus]
Length = 405
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V QNAL L+ + L+GR L S
Sbjct: 125 KFGQPKGFAYVEFVEIDAVQNAL-LLNESELHGRQLKVS 162
>gi|221482177|gb|EEE20538.1| RNA binding protein, putative [Toxoplasma gondii GT1]
gi|221502447|gb|EEE28174.1| RNA binding protein, putative [Toxoplasma gondii VEG]
Length = 371
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
GN +GFAFVE+ + A EA++N ++GR L+ V Q +S
Sbjct: 173 GNSKGFAFVEFELPEVADIVAEAMNNYMMFGRTLVCHVVPPQNLS 217
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y + +E NA+E+L L GR + S A
Sbjct: 226 GRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
>gi|403224014|dbj|BAM42144.1| Ser/Arg-rich splicing factor [Theileria orientalis strain
Shintoku]
Length = 267
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGF FVEY K +A +A++A+ NT L G + +A D+ S
Sbjct: 48 RGFGFVEYYEKSDAVDAVKAMDNTDLDGSIINCCLAQDRRKS 89
>gi|237843123|ref|XP_002370859.1| RNA binding protein, putative [Toxoplasma gondii ME49]
gi|211968523|gb|EEB03719.1| RNA binding protein, putative [Toxoplasma gondii ME49]
Length = 371
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
GN +GFAFVE+ + A EA++N ++GR L+ V Q +S
Sbjct: 173 GNSKGFAFVEFELPEVADIVAEAMNNYMMFGRTLVCHVVPPQNLS 217
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR--HLIFSVAHDQIISIIAPT 53
G +GFAF+E+ + +A++ALE +NT + GR L +S + D PT
Sbjct: 495 GRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRDWNRGNSGPT 546
>gi|301107420|ref|XP_002902792.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097910|gb|EEY55962.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1005
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 3 FGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV+Y +A+ A+E L+ T L GR +I A
Sbjct: 405 LGRSRGFGFVQYRDVADARAAVEKLNGTKLKGREMIVDFA 444
>gi|198474085|ref|XP_001356555.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
gi|198138240|gb|EAL33619.2| GA18884 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++ALEA+ L GR L +A
Sbjct: 64 RGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMAR 100
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV + + QEA +A++AL++ L GR + ++A+
Sbjct: 41 GRSRGFGFVTFGSPQEADSAIQALNDQELDGRRIKVNLAN 80
>gi|348523083|ref|XP_003449053.1| PREDICTED: nucleolin-like isoform 3 [Oreochromis niloticus]
Length = 658
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR--HLIFSVAHDQIISIIAPT 53
G +GFAF+E+ + +A++ALE +NT + GR L +S + D PT
Sbjct: 453 GRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRDWNRGNSGPT 504
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR--HLIFSVAHDQIISIIAPT 53
G +GFAF+E+ + +A++ALE +NT + GR L +S + D PT
Sbjct: 501 GRPKGFAFLEFESTDDAKDALENFNNTEIEGRSIRLEYSQSRDWNRGNSGPT 552
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ ++A A++ ++++ L+GR + ++A Q I
Sbjct: 47 HRGFAFIEFEMAEDAAAAIDNMNDSELFGRTIRVNIAKPQKI 88
>gi|302765723|ref|XP_002966282.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
gi|302793049|ref|XP_002978290.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300154311|gb|EFJ20947.1| hypothetical protein SELMODRAFT_7949 [Selaginella moellendorffii]
gi|300165702|gb|EFJ32309.1| hypothetical protein SELMODRAFT_7952 [Selaginella moellendorffii]
Length = 92
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A+E L ++ GR+++ A
Sbjct: 46 GDSRGFAFVRYKHADEAQKAIERLDGKNVDGRNIVVQFA 84
>gi|414867082|tpg|DAA45639.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 216
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+ RGFAFV Y + EAQ+A++ L GR L+ A P + + R +
Sbjct: 54 GDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAK------YGPNAEKIHRGRIT 107
Query: 64 ESLEELRARTAAQ 76
E + R R ++
Sbjct: 108 EENPKPRGRCRSR 120
>gi|406911424|gb|EKD51218.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 125
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FVE +EAQ A++ L+N + GR +I + A
Sbjct: 41 GRSKGFGFVEMANDEEAQKAIDDLNNKEIDGRKIIVNEAR 80
>gi|156376506|ref|XP_001630401.1| predicted protein [Nematostella vectensis]
gi|156217421|gb|EDO38338.1| predicted protein [Nematostella vectensis]
Length = 215
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 26/38 (68%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
RG AF+ ++ +Q AQNA+ A++ ++GR + ++A D
Sbjct: 51 RGVAFILFIDRQSAQNAVAAVNKKQMFGRTIKCTIAKD 88
>gi|119190143|ref|XP_001245678.1| hypothetical protein CIMG_05119 [Coccidioides immitis RS]
gi|320033029|gb|EFW14979.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
gi|392868585|gb|EAS34386.2| peptidyl prolyl cis-trans isomerase Cyclophilin [Coccidioides
immitis RS]
Length = 152
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFELAQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|449500421|ref|XP_004174936.1| PREDICTED: probable RNA-binding protein 46 [Taeniopygia guttata]
Length = 757
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 7/96 (7%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHLY-GRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A++ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIKILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRARTAAQFTDEVNGFQNSTKLSKKR 94
K+ E L E++ T +V + N+T +K R
Sbjct: 151 DKKKEEILNEMKKVTEGVV--DVIVYPNATDKTKNR 184
>gi|148709767|gb|EDL41713.1| mCG1979, isoform CRA_a [Mus musculus]
Length = 369
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 78 GNNRGYAFVTFSNKQEAKNAIKQLNN 103
>gi|27462518|gb|AAO15465.1|AF442133_1 APOBEC-1 complementation factor 43 kDa variant [Rattus norvegicus]
Length = 383
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|303322531|ref|XP_003071257.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110959|gb|EER29112.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 154
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFELAQDAKEAIDNMDQSELYGRIIKVAAAKPQ 91
>gi|255539947|ref|XP_002511038.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550153|gb|EEF51640.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 234
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
KFG +GFA+VE+V QNAL L+ + L+GR L S I
Sbjct: 156 KFGQPKGFAYVEFVEVDAVQNAL-LLNESELHGRQLKVSAKRTNI 199
>gi|149062705|gb|EDM13128.1| apobec-1 complementation factor, isoform CRA_b [Rattus norvegicus]
Length = 397
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 85 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 119
>gi|449547432|gb|EMD38400.1| hypothetical protein CERSUDRAFT_113554 [Ceriporiopsis
subvermispora B]
Length = 153
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGF FV Y + +AQ+A++ + L GR L S+A
Sbjct: 51 HRGFGFVTYASSADAQDAIDNMDLNELNGRVLKVSIA 87
>gi|367020484|ref|XP_003659527.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
gi|347006794|gb|AEO54282.1| hypothetical protein MYCTH_2296694 [Myceliophthora thermophila
ATCC 42464]
Length = 153
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y+ + +AQ A+ A++N GR + A D
Sbjct: 40 GRSRGFGFVRYINEDDAQKAITAMNNVEFDGRQIRVDKASD 80
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FV Y + QE QNA+++L L GR + S A
Sbjct: 242 GRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAE 281
>gi|346468399|gb|AEO34044.1| hypothetical protein [Amblyomma maculatum]
Length = 577
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAK 61
H+GFAFVEY + AQ ALE ++ + GR++ V + AP Q+ME AK
Sbjct: 114 HKGFAFVEYELPEAAQLALEQMNGVLIGGRNI--KVGRPSNMPQAAPILDQIMEEAK 168
>gi|147827572|emb|CAN77560.1| hypothetical protein VITISV_031100 [Vitis vinifera]
Length = 175
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ + L+GR L S I +
Sbjct: 83 KFGQPKGFAYVEFVEIDAVQNAL-LLNESELHGRQLKVSAKRTNIPGM 129
>gi|414867083|tpg|DAA45640.1| TPA: hypothetical protein ZEAMMB73_077445 [Zea mays]
gi|448878222|gb|AGE46074.1| arginine/serine-rich splicing factor SC26 transcript III [Zea mays]
Length = 198
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G+ RGFAFV Y + EAQ+A++ L GR L+ A P + + R +
Sbjct: 54 GDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQFAK------YGPNAEKIHRGRIT 107
Query: 64 ESLEELRARTAAQ 76
E + R R ++
Sbjct: 108 EENPKPRGRCRSR 120
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 85 GRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER 126
>gi|406994417|gb|EKE13409.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 155
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G +GF FVE T +EA NA+ L++T GR LI + A
Sbjct: 62 GRSKGFGFVEMETSEEASNAIAKLNDTDFGGRKLIVAEA 100
>gi|449280244|gb|EMC87583.1| APOBEC1 complementation factor [Columba livia]
Length = 589
Score = 38.1 bits (87), Expect = 0.73, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 127
>gi|45384000|ref|NP_990596.1| nucleolin [Gallus gallus]
gi|128840|sp|P15771.1|NUCL_CHICK RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|63711|emb|CAA35060.1| unnamed protein product [Gallus gallus]
Length = 694
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +G+AFVE+ T ++A+ AL + +NT + GR +
Sbjct: 495 GRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAI 528
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FV Y + QE QNA+++L L GR + S A
Sbjct: 242 GRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAE 281
>gi|326923245|ref|XP_003207849.1| PREDICTED: APOBEC1 complementation factor-like [Meleagris
gallopavo]
Length = 590
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEARNAIKQLNNYEIRNGRLL 127
>gi|149062704|gb|EDM13127.1| apobec-1 complementation factor, isoform CRA_a [Rattus norvegicus]
Length = 375
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 85 GNNRGYAFVTFSNKQEAKNAIKQLNNYEIRNGRLL 119
>gi|357447143|ref|XP_003593847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355482895|gb|AES64098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 559
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Query: 62 EGE-SLEELRARTAA-QFTDEVNGFQNSTKLSKKRKHMTILDEGTMKFE 108
EG+ SLEEL+ARTA + + +Q + LSKKRK +++LDE M+F+
Sbjct: 500 EGDRSLEELQARTALLNIMNIEDRYQYANNLSKKRKAISMLDEENMRFK 548
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 243 GRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 284
>gi|183221265|ref|YP_001839261.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911356|ref|YP_001962911.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167776032|gb|ABZ94333.1| RNA-binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779687|gb|ABZ97985.1| RNA binding protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 89
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGFAF+ Y + EA+ A+ ++ + GR+L + A D+
Sbjct: 42 GNFRGFAFITYASPSEAEEAVAQMNGQPIDGRNLKVTFAEDK 83
>gi|291225813|ref|XP_002732891.1| PREDICTED: nuclear receptor coactivator 5-like [Saccoglossus
kowalevskii]
Length = 862
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGFAFV+Y K++A+ +E +NT++ R + ++A ++
Sbjct: 100 HRGFAFVQYFNKEDAERGVEKYNNTYIKSRRVDCNLAGER 139
>gi|148223425|ref|NP_001086476.1| zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Xenopus laevis]
gi|82236059|sp|Q6DJI9.1|ZCRB1_XENLA RecName: Full=Zinc finger CCHC-type and RNA-binding
motif-containing protein 1; AltName: Full=U11/U12 small
nuclear ribonucleoprotein 31 kDa protein; Short=U11/U12
snRNP 31 kDa protein
gi|49671136|gb|AAH75189.1| MGC82154 protein [Xenopus laevis]
Length = 218
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G +FV ++ K+ AQN + L+N L+GR + S+A D
Sbjct: 51 KGVSFVLFLDKESAQNCVRGLNNKQLFGRAIKASIAKD 88
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFVE+ + ++A A++ ++++ L+GR + ++A
Sbjct: 47 HRGFAFVEFESAEDAAAAIDNMNDSELFGRTIRVNIA 83
>gi|209881578|ref|XP_002142227.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209557833|gb|EEA07878.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 533
Score = 37.7 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA---------HDQIISIIAP 52
K G HRG+ F+E+ T +A+ A+E ++ + G+ L +VA I I++P
Sbjct: 315 KPGTHRGYGFIEFGTPDQAKLAIETMNGFEVGGKQLKVNVATALKPSNSISSNQIPIVSP 374
Query: 53 TFQ 55
T Q
Sbjct: 375 TLQ 377
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ + ++A A++ ++++ L GR + ++A Q I
Sbjct: 46 HRGFAFIEFESAEDAAAAVDNMNDSELCGRTIRVNIAKPQRI 87
>gi|317029023|ref|XP_001390966.2| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 480
Score = 37.7 bits (86), Expect = 0.78, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 140 GMSKGCGIVEYATREQAQNAVNTLSNQNLMGR 171
>gi|58477316|gb|AAH89622.1| APOBEC1 complementation factor [Mus musculus]
Length = 384
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|317029025|ref|XP_003188692.1| RNP domain protein [Aspergillus niger CBS 513.88]
Length = 428
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 88 GMSKGCGIVEYATREQAQNAVNTLSNQNLMGR 119
>gi|408794570|ref|ZP_11206175.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408461805|gb|EKJ85535.1| hypothetical protein LEP1GSC017_3646 [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 89
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RGFAF+ Y +EA+ A+ ++ + GR+L + A D+
Sbjct: 42 GNFRGFAFITYANPEEAEEAVTQMNGQPVDGRNLKVTFAEDK 83
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +G+AFVE+ T ++A+ AL + +NT + GR +
Sbjct: 451 GRPKGYAFVEFPTTEDAKEALNSCNNTEIEGRAI 484
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIF 39
K GN +G A++E+ T+ EA ALE T + GR ++
Sbjct: 355 KEGNSKGMAYIEFKTEAEANKALEEKQGTEIDGRAMVI 392
>gi|50346319|gb|AAT74918.1| truncated APOBEC-1 stimulating protein [Mus musculus]
Length = 384
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN+RG+AFV + KQEA+NA++ L+N
Sbjct: 93 GNNRGYAFVTFSNKQEAKNAIKQLNN 118
>gi|363735090|ref|XP_003641506.1| PREDICTED: APOBEC1 complementation factor-like isoform 1 [Gallus
gallus]
Length = 581
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEARNAIKQLNNYEIRNGRLL 127
>gi|363735088|ref|XP_421561.3| PREDICTED: APOBEC1 complementation factor-like isoform 2 [Gallus
gallus]
Length = 589
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEARNAIKQLNNYEIRNGRLL 127
>gi|302404281|ref|XP_002999978.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261361160|gb|EEY23588.1| RNP domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 572
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 206 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 237
>gi|198417563|ref|XP_002128897.1| PREDICTED: similar to RNA-binding protein 5 (RNA-binding motif
protein 5) (Tumor suppressor LUCA15) (Protein G15)
(Renal carcinoma antigen NY-REN-9) [Ciona intestinalis]
Length = 880
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNT----HLYGRHLI--FSVAH 43
K GN RGF FV++ T ++ Q LE L H+ GRH+I FS H
Sbjct: 369 KLGNSRGFCFVQWKTLEDCQQVLEYLRTATPRFHIDGRHVILDFSTPH 416
>gi|409079593|gb|EKM79954.1| hypothetical protein AGABI1DRAFT_72681 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 443
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAP 52
G +GFAFV+++ + A +AL N HL GR L+ A + + AP
Sbjct: 294 GKCKGFAFVDFLNTEHATSALVNPKNHHLNGRDLVVEYASAEAVRRGAP 342
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV + T QEAQ A++ L+ L GR + ++A+
Sbjct: 51 GRSRGFGFVTFGTSQEAQAAIDGLNEQDLDGRRIRVNLAN 90
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 37.7 bits (86), Expect = 0.82, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRG+ F+EY T Q A +A+ +++ L G+HL
Sbjct: 255 GKHRGYGFIEYETTQSAHDAIASMNMFDLGGQHL 288
>gi|119607925|gb|EAW87519.1| RNA binding motif protein 18, isoform CRA_b [Homo sapiens]
Length = 146
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLALSKKLVVRWAHAQV 108
>gi|345495932|ref|XP_001604239.2| PREDICTED: probable RNA-binding protein 18-like [Nasonia
vitripennis]
Length = 199
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV Y T ++A++A+E L N + ++++ AH
Sbjct: 60 GQSRGYAFVTYKTARDAESAMETLQNLRVGSKNIVVRYAH 99
>gi|351725805|ref|NP_001237617.1| uncharacterized protein LOC100527545 [Glycine max]
gi|255632582|gb|ACU16641.1| unknown [Glycine max]
Length = 214
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V QNAL L+ + L+GR L S
Sbjct: 125 KFGQPKGFAYVEFVEIDAVQNAL-LLNESELHGRQLKVS 162
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V + Q AL AL+ + L+GR L S
Sbjct: 125 KFGQPKGFAYVEFVEVEAVQEAL-ALNESELHGRQLKVS 162
>gi|427776743|gb|JAA53823.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Rhipicephalus pulchellus]
Length = 579
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-QVMERAK 61
H+GFAFVEY + AQ ALE ++ + GR++ V + AP Q+ME AK
Sbjct: 114 HKGFAFVEYELPEAAQLALEQMNGVLIGGRNI--KVGRPSNMPQAAPILDQIMEEAK 168
>gi|284108895|ref|ZP_06386469.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
gi|283829840|gb|EFC34132.1| RNP-1 like RNA-binding protein [Candidatus Poribacteria sp.
WGA-A3]
Length = 90
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FVE + +EA A+EAL+ T GR L+ + A
Sbjct: 41 GRSRGFGFVEMGSGEEAGQAIEALNGTDFQGRSLVVNEA 79
>gi|260826884|ref|XP_002608395.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
gi|229293746|gb|EEN64405.1| hypothetical protein BRAFLDRAFT_152479 [Branchiostoma floridae]
Length = 92
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
N GFAFVE+ ++A++A++AL ++ GR ++ ++H
Sbjct: 38 NPAGFAFVEFEDPRDARDAVDALDGRYICGRRVLVEMSH 76
>gi|71020131|ref|XP_760296.1| hypothetical protein UM04149.1 [Ustilago maydis 521]
gi|46100005|gb|EAK85238.1| hypothetical protein UM04149.1 [Ustilago maydis 521]
Length = 228
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+AFVEY + QEA A+ N L GR + + A
Sbjct: 84 GQPRGYAFVEYASPQEAMQAVAGAHNKTLKGRSISVTFA 122
>gi|224114678|ref|XP_002339510.1| predicted protein [Populus trichocarpa]
gi|222832586|gb|EEE71063.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V QNAL L+ + L+GR L S + +
Sbjct: 135 KFGQPKGFAYVEFVEVDAIQNAL-LLNESELHGRQLKVSAKRTNVPGM 181
>gi|226496531|ref|NP_001152123.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|195652939|gb|ACG45937.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 161
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y + EAQ+A++ L GR L+ A
Sbjct: 54 GDPRGFAFVRYNYEDEAQDAIDGLDGMRFDGRALMVQFA 92
>gi|302509172|ref|XP_003016546.1| hypothetical protein ARB_04835 [Arthroderma benhamiae CBS 112371]
gi|291180116|gb|EFE35901.1| hypothetical protein ARB_04835 [Arthroderma benhamiae CBS 112371]
Length = 152
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF ++E+ Q+A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYIEFELPQDAKEAIDNMDQSVLYGRTIKVAAAKPQ 91
>gi|346319890|gb|EGX89491.1| pre-mRNA splicing factor cwc2 [Cordyceps militaris CM01]
Length = 400
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF--QVMERAKE 62
N RG AFV YV + AQ A E++++ S+ HD+I+++ T M +A+E
Sbjct: 203 NQRGVAFVTYVNEANAQFAKESMAHQ---------SLDHDEILNVRWATADPNPMAQARE 253
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE +RA +F E+ G + K+RK
Sbjct: 254 ARRIEEQAAQAIRAALGDEFVAEIEGRDPEAR--KRRK 289
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A+E L ++ GR ++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAVEKLDGRNVDGREIMVQFA 92
>gi|395333566|gb|EJF65943.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 151
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAP 52
HRGFAFV Y + +AQ+A++ + L GR L ++A AP
Sbjct: 55 HRGFAFVTYASPADAQDAIDNMDLNELNGRVLRVNLARPMKGPTQAP 101
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A+E L T + GR + A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAVERLDGTMVDGREITVQFA 92
>gi|388515797|gb|AFK45960.1| unknown [Lotus japonicus]
Length = 171
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V + QNA+ L+ + L+GR L S + +
Sbjct: 82 KFGQPKGFAYVEFVEAEAVQNAV-MLNESELHGRQLKVSAKRTNVPGM 128
>gi|343172515|gb|AEL98961.1| polyadenylate-binding protein, partial [Silene latifolia]
Length = 213
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V ++ Q AL L+ + L+GR L S + +
Sbjct: 121 KFGQPKGFAYVEFVEQEAVQQAL-LLNESELHGRQLKVSPKRTNVPGL 167
>gi|156537512|ref|XP_001607424.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Nasonia vitripennis]
Length = 239
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AFV ++T +AQN AL+NT + GR + S+A D
Sbjct: 51 KGVAFVLFLTPGDAQNCATALNNTEIGGRKVKSSIAVD 88
>gi|402586187|gb|EJW80125.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, partial
[Wuchereria bancrofti]
Length = 187
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRGF FVEY ++A A++ ++++ L+GR +
Sbjct: 51 GKHRGFGFVEYELAEDAAAAIDNMNDSELFGRTI 84
>gi|171915150|ref|ZP_02930620.1| RNA-binding protein (RRM domain) [Verrucomicrobium spinosum DSM
4136]
Length = 158
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G RGFAFVE +EA+ A+ L+N L GR L
Sbjct: 28 GRSRGFAFVEMPNDEEARAAINGLNNVELAGRPL 61
>gi|71001898|ref|XP_755630.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
fumigatus Af293]
gi|66853268|gb|EAL93592.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus Af293]
gi|159129687|gb|EDP54801.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus A1163]
Length = 152
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFDLPEDAAEAIDNMDGSELYGRTIKVAAAKPQ 91
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FV Y + +E NA+E+L L GR + S A
Sbjct: 232 GRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271
>gi|402219696|gb|EJT99769.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 262
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AF+E+ K EA A+ + + + GR+L+ + AH
Sbjct: 85 GKPRGYAFIEFSNKDEALKAIVTMHDKLVRGRNLVVTFAH 124
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR--HLIFSVAHDQ 45
G +GFAFV++ T ++A+ A+ + +NT + GR L FS Q
Sbjct: 498 GRPKGFAFVDFATAEDAKEAMNSCNNTEIEGRAIRLEFSTQGGQ 541
>gi|71028770|ref|XP_764028.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350982|gb|EAN31745.1| hypothetical protein, conserved [Theileria parva]
Length = 245
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGF FVE+ K +A +A+ A+ NT L G + +A D+ S
Sbjct: 48 RGFGFVEFYDKADALDAVRAMDNTELDGSVITCCIAQDRRKS 89
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L L GR ++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDKLDGRMLDGREIMVQFA 92
>gi|195998405|ref|XP_002109071.1| hypothetical protein TRIADDRAFT_35408 [Trichoplax adhaerens]
gi|190589847|gb|EDV29869.1| hypothetical protein TRIADDRAFT_35408, partial [Trichoplax
adhaerens]
Length = 216
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
+G AF+ ++ + A A+EAL+NT + GR + S+AHD
Sbjct: 51 KGVAFILFLERPSALAAVEALNNTEVIGRTIKCSIAHDN 89
>gi|312066701|ref|XP_003136395.1| cytosolic cyclophilin [Loa loa]
gi|307768442|gb|EFO27676.1| cytosolic cyclophilin [Loa loa]
Length = 322
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRGF FVEY ++A A++ ++++ L+GR +
Sbjct: 51 GKHRGFGFVEYELAEDAAAAIDNMNDSELFGRTI 84
>gi|392375173|ref|YP_003207006.1| RNP-1 like RNA-binding protein [Candidatus Methylomirabilis
oxyfera]
gi|258592866|emb|CBE69175.1| RNP-1 like RNA-binding protein (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 140
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFVE + +AQ A++AL+ + GR L + A +Q
Sbjct: 70 GRARGFAFVEMENQSDAQAAIQALNGRQVGGRALTVNEAKEQ 111
>gi|449458309|ref|XP_004146890.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 237
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG+ +GFA+VE+V QNAL L+ + L+GR L S + +
Sbjct: 146 KFGHPKGFAYVEFVEVDAVQNAL-LLNESELHGRQLKVSAKRTNVPGM 192
>gi|327279356|ref|XP_003224422.1| PREDICTED: APOBEC1 complementation factor-like [Anolis
carolinensis]
Length = 589
Score = 37.7 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + KQEA+NA+ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNKQEARNAIRQLNNYEIRNGRLL 127
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 246 GRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 287
>gi|119481457|ref|XP_001260757.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
gi|119408911|gb|EAW18860.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
Length = 152
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFDLPEDAAEAIDNMDGSELYGRTIKVAAAKPQ 91
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN RG+ FV Y K E + AL +++ L GR L S+A +
Sbjct: 246 GNSRGYGFVSYANKSEMEAALTIMNDVELEGRALRVSLAQGK 287
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FV Y + QE QNA+ +L+ L GR + S A
Sbjct: 242 GRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAE 281
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 123 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 154
>gi|387018164|gb|AFJ51200.1| RNA binding motif protein 18 [Crotalus adamanteus]
Length = 194
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A+ L+ + L+ AH Q+
Sbjct: 70 GQPRGYCFVNFETKQEAEQAIHCLNGKLALSKKLVVRWAHAQV 112
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 123 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 159
>gi|159483435|ref|XP_001699766.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281708|gb|EDP07462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 940
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGF FV+Y ++A+ A+ L T L GR L +A
Sbjct: 54 HRGFGFVQYALPEDAERAVGELDGTALKGRKLQVELA 90
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 111 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 142
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 123 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 154
>gi|255545196|ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
gi|223547567|gb|EEF49062.1| conserved hypothetical protein [Ricinus communis]
Length = 170
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
K G RGFAFV++ TK+EA+ A E + GR L+ +A ++ +
Sbjct: 53 KRGEPRGFAFVQFSTKEEAELAKEKMHGRLACGRPLVVRLASEKYL 98
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 109 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 140
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 132 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 163
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 123 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 154
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y +EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 109 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 140
>gi|425448845|ref|ZP_18828689.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
gi|389767706|emb|CCI06978.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
7941]
Length = 97
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGFAFVE V+K + A+EAL GR + + A D+
Sbjct: 39 GRKRGFAFVEMVSKGQETAAIEALDGADWMGRSIKVNQARDR 80
>gi|388515309|gb|AFK45716.1| unknown [Lotus japonicus]
Length = 218
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V + QNA+ L+ + L+GR L S + +
Sbjct: 128 KFGQPKGFAYVEFVEAEAVQNAV-MLNESELHGRQLKVSAKRTNVPGM 174
>gi|225713872|gb|ACO12782.1| Peptidyl-prolyl cis-trans isomerase E [Lepeophtheirus salmonis]
Length = 311
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A A++ + ++ L+GR L ++A
Sbjct: 48 HRGFAFIEYEEPRDATAAIDNMHDSELFGRTLRVNLA 84
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L L GR ++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDKLDGRMLDGREIMVQFA 92
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + T Q+A+ AL+AL L GR + + A Q
Sbjct: 80 GRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATKQ 121
>gi|391870089|gb|EIT79277.1| hypothetical protein Ao3042_04344 [Aspergillus oryzae 3.042]
Length = 432
Score = 37.4 bits (85), Expect = 1.00, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 88 GMSKGCGIVEYATREQAQNAVNTLSNQNLMGR 119
>gi|170594273|ref|XP_001901888.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
gi|158590832|gb|EDP29447.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
Length = 316
Score = 37.4 bits (85), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G HRGF FVEY ++A A++ ++++ L+GR +
Sbjct: 51 GKHRGFGFVEYELAEDAAAAIDNMNDSELFGRTI 84
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A+E L T + GR + A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAVERLDGTMVDGREITVQFA 92
>gi|295789538|pdb|3MD1|A Chain A, Crystal Structure Of The Second Rrm Domain Of Yeast
Poly(U)-Binding Protein (Pub1)
gi|295789539|pdb|3MD1|B Chain B, Crystal Structure Of The Second Rrm Domain Of Yeast
Poly(U)-Binding Protein (Pub1)
Length = 83
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
M+ G+ RG+ FV + ++ +AQNA++++ L GR L + A
Sbjct: 37 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWA 78
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + + +EA +A++AL L+GR + + A D+
Sbjct: 78 GRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|374812572|ref|ZP_09716309.1| RNA-binding protein [Treponema primitia ZAS-1]
Length = 90
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN +GF FVE T EAQ A+ ++T L GR + + A D+
Sbjct: 41 GNSKGFGFVEMSTDAEAQAAISGTNSTDLDGRAIKVNEAMDK 82
>gi|317138120|ref|XP_001816687.2| RNP domain protein [Aspergillus oryzae RIB40]
Length = 484
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 140 GMSKGCGIVEYATREQAQNAVNTLSNQNLMGR 171
>gi|440637445|gb|ELR07364.1| hypothetical protein GMDG_08379 [Geomyces destructans 20631-21]
Length = 409
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF--QVMERAKE 62
N RG AFV Y T+ AQ A EA+++ S+ H++++++ T M +A+E
Sbjct: 213 NTRGVAFVTYTTEANAQFAKEAMAHQ---------SLDHEEVLNVRWATADPNPMAQARE 263
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
S+EE +R A+F ++ G K K+R+
Sbjct: 264 ARSIEEQAAEAVRRALPAEFVAQIEGRDGEAK--KRRR 299
>gi|406929710|gb|EKD65230.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FVE T +EAQ A++ L+N++L R ++ + A
Sbjct: 41 GQGKGFGFVEMATAEEAQKAIQQLNNSNLNDRSIVVNEAR 80
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + T Q+A+ AL+AL L GR + + A Q
Sbjct: 80 GRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATKQ 121
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+ FV Y TK E ALE+L+ L GR + S+A +
Sbjct: 240 GRSRGYGFVCYSTKAEMDTALESLNGVELEGRAIRISLAQGR 281
>gi|289742363|gb|ADD19929.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Glossina
morsitans morsitans]
Length = 305
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY + ++A +A++ ++++ L GR + ++A
Sbjct: 47 HRGFAFIEYESAEDAASAIDNMNDSELCGRTIRVNLA 83
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G RGF F+ + T +EA +AL+A+ N L GR
Sbjct: 78 GRSRGFGFITFATSEEASSALQAMDNKELDGR 109
>gi|449519186|ref|XP_004166616.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 229
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG+ +GFA+VE+V QNAL L+ + L+GR L S + +
Sbjct: 138 KFGHPKGFAYVEFVEVDAVQNAL-LLNESELHGRQLKVSAKRTNVPGM 184
>gi|224077392|ref|XP_002305243.1| predicted protein [Populus trichocarpa]
gi|222848207|gb|EEE85754.1| predicted protein [Populus trichocarpa]
Length = 138
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
K G RGFAF+++ TK+EA+ A E + GR L+ +A ++ +
Sbjct: 21 KRGEPRGFAFIQFSTKEEAKLAKEKMHGRLACGRPLVVRLASEKYV 66
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV V+K+E +A+ AL L GR L +VA ++
Sbjct: 243 GRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 284
>gi|170046410|ref|XP_001850759.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
gi|167869182|gb|EDS32565.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
Length = 308
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGFAF+E+ ++A A++ ++++ L GR + +VA Q I
Sbjct: 46 HRGFAFIEFENAEDAAAAVDNMNDSELCGRTVRVNVAKPQRI 87
>gi|68531995|ref|XP_723677.1| peptidyl-prolyl cis-trans isomerase E [Plasmodium yoelii yoelii
17XNL]
gi|23478052|gb|EAA15242.1| peptidyl-prolyl cis-trans isomerase E-related [Plasmodium yoelii
yoelii]
Length = 127
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF-------QVME 58
+RGFAF+EYV K +A++AL ++N L G+ + + + + + P + + M
Sbjct: 47 NRGFAFIEYVEKNDAKHALYNMNNFELNGKIITVNYSRTKKMDQYKPVWIDELYNQEQMR 106
Query: 59 RAKEGESLEELRARTAAQ 76
+EG S E + A Q
Sbjct: 107 LIEEGTSNVEKEEKDAPQ 124
>gi|301757153|ref|XP_002914427.1| PREDICTED: APOBEC1 complementation factor-like [Ailuropoda
melanoleuca]
gi|281344706|gb|EFB20290.1| hypothetical protein PANDA_002310 [Ailuropoda melanoleuca]
Length = 592
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLI 38
GN+RG+AFV + +QEA+NA++ L+N + L+
Sbjct: 93 GNNRGYAFVTFSNRQEAKNAIKQLNNYEIRNGRLL 127
>gi|302036839|ref|YP_003797161.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|190343253|gb|ACE75641.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|300604903|emb|CBK41236.1| RNA-binding protein [Candidatus Nitrospira defluvii]
Length = 107
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FVE T +EA+ A+ AL+ + + GR L + A Q
Sbjct: 41 GQSRGFGFVEMSTAEEAKAAITALNGSDMDGRQLTVNEAKPQ 82
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y + EAQ A+E L + GR ++ A
Sbjct: 55 GDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFA 93
>gi|219881900|gb|ACL52165.1| cold response protein 2 [Metarhizium anisopliae]
Length = 183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y + +AQNA+ A++N GR + A D
Sbjct: 40 GRSRGFGFVRYTQENDAQNAIAAMNNVEFDGRTIRVDKASD 80
>gi|449329615|gb|AGE95886.1| putative RNA-binding protein [Encephalitozoon cuniculi]
Length = 153
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
+ + RG+ F Y T++E++ L LYGR L FS +Q+
Sbjct: 39 LYYNQDRGYCFASYRTREESEYTYNVLRGVKLYGRRLYFSKVEEQV 84
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + + +EA +A++AL L+GR + + A D+
Sbjct: 78 GRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|119602591|gb|EAW82185.1| fuse-binding protein-interacting repressor, isoform CRA_b [Homo
sapiens]
Length = 171
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 126 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 157
>gi|406926747|gb|EKD62896.1| RNA-binding protein [uncultured bacterium]
Length = 134
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ--IISIIAP 52
G +GF FVE T++ A+ A+E + + + GR +I S A Q +S +AP
Sbjct: 41 GRSKGFGFVEMETEEAAKAAIEKFNGSDMGGRKIIVSEARAQESSVSGVAP 91
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ T +EAQ AL+A + GR L
Sbjct: 276 GRPKGFAFVEFATHKEAQAALDAYNGQDFEGRAL 309
>gi|332373880|gb|AEE62081.1| unknown [Dendroctonus ponderosae]
Length = 168
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++AL+A+ L GR L +A
Sbjct: 55 RGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMAR 91
>gi|353240787|emb|CCA72639.1| hypothetical protein PIIN_06576 [Piriformospora indica DSM 11827]
Length = 210
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G RG+AFVEY + A AL A + L GR + + A AP F R + G
Sbjct: 92 GKPRGYAFVEYADAESAAKALHACNQKLLRGRKISVTFATQ------APDFSTSGRPRIG 145
Query: 64 E 64
E
Sbjct: 146 E 146
>gi|194033497|ref|XP_001925831.1| PREDICTED: probable RNA-binding protein 18 isoform 1 [Sus scrofa]
gi|194033499|ref|XP_001925851.1| PREDICTED: probable RNA-binding protein 18 isoform 2 [Sus scrofa]
Length = 190
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A+ L+ + L+ AH Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIHCLNGKLALSKKLVVRWAHAQV 108
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 126 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 157
>gi|358388496|gb|EHK26089.1| hypothetical protein TRIVIDRAFT_176419 [Trichoderma virens Gv29-8]
Length = 379
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF--QVMERAKE 62
N RG FV YV + A+ A EA+++ S+ HD+I+++ T M RA+E
Sbjct: 186 NSRGVGFVTYVNEANAEFAKEAMAHQ---------SLDHDEILNVRWATADPNPMARARE 236
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE +R A+F E+ G + K+RK
Sbjct: 237 ARRIEEQAAEAIRRALPAEFVAEIEG--KDPEARKRRK 272
>gi|126310751|ref|XP_001371554.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|402080147|gb|EJT75292.1| RNP domain-containing protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 509
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 166 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 197
>gi|355714554|gb|AES05042.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 314
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 170 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 201
>gi|27803030|emb|CAD60733.1| unnamed protein product [Podospora anserina]
Length = 516
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 162 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 193
>gi|297293557|ref|XP_001092238.2| PREDICTED: probable RNA-binding protein 46 [Macaca mulatta]
Length = 709
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHLY-GRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 270 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 326
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 327 EKKKEEILDEMKKVT 341
>gi|449272006|gb|EMC82136.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Columba livia]
Length = 216
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|326911410|ref|XP_003202052.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Meleagris gallopavo]
Length = 216
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E AL +L+ T L GR + ++A
Sbjct: 276 GRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 314
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E AL +L+ T L GR + ++A
Sbjct: 274 GRSRGYGFVCYSTKEEMDEALSSLNGTELEGREIRVNLA 312
>gi|348580335|ref|XP_003475934.1| PREDICTED: probable RNA-binding protein 46-like [Cavia porcellus]
Length = 436
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 92 MEFSGENRGYAFVTYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 148
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 149 EKKKEEILDEIKKVT 163
>gi|312380239|gb|EFR26295.1| hypothetical protein AND_07754 [Anopheles darlingi]
Length = 1134
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD-QIISIIAPTFQVMERAKEGES 65
RGF FV++ +Q AQNA++ L+ GR L VA+D + + P ++ AK
Sbjct: 45 RGFGFVQFHDEQSAQNAIKGLNGKVFSGRKLNVKVANDNRAKKGLLPRGHPLQGAKTAAP 104
Query: 66 LEELRARTA 74
LR R+
Sbjct: 105 SGPLRDRSP 113
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+ FV Y T+ E +NAL +L+ L GR + S+A
Sbjct: 242 GRSRGYGFVCYATRSEMENALVSLNGVELEGRAMRVSLAQ 281
>gi|50728210|ref|XP_416034.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Gallus gallus]
Length = 216
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|126339500|ref|XP_001362144.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Monodelphis domestica]
Length = 217
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|363745135|ref|XP_423964.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Gallus gallus]
Length = 158
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 126 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 157
>gi|432854494|ref|XP_004067928.1| PREDICTED: nucleolin-like isoform 1 [Oryzias latipes]
Length = 698
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ ++A+ ALE +NT + GR +
Sbjct: 494 GRPKGFAFIEFENAEDAKEALENFNNTEIEGRSI 527
>gi|395538109|ref|XP_003771028.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Sarcophilus harrisii]
Length = 217
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|355715816|gb|AES05411.1| RNA binding motif protein 46 [Mustela putorius furo]
Length = 149
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVMERAKE 62
G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + + K+
Sbjct: 36 GENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPKEKKK 92
Query: 63 GESLEELRARTAAQFTDEVNGFQNSTKLSKKR 94
E L+E++ T +V + ++T +K R
Sbjct: 93 EEILDEMKKVTEG--VVDVIVYPSATDKTKNR 122
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV ++ K++A++A++A+ L GR L +A
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|224093656|ref|XP_002196012.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Taeniopygia guttata]
Length = 216
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|84996673|ref|XP_953058.1| RNA-binding protein [Theileria annulata strain Ankara]
gi|65304054|emb|CAI76433.1| RNA-binding protein, putative [Theileria annulata]
Length = 245
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
RGF FVE+ K +A +A+ A+ NT L G + +A D+ S
Sbjct: 48 RGFGFVEFYDKADALDAVRAMDNTELDGSVITCCIAQDRRKS 89
>gi|111185612|gb|AAI19438.1| Puf60 protein [Mus musculus]
gi|152060991|gb|AAI48275.1| Puf60 protein [Mus musculus]
Length = 241
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 83 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 114
>gi|336467389|gb|EGO55553.1| hypothetical protein NEUTE1DRAFT_95731 [Neurospora tetrasperma FGSC
2508]
gi|350287968|gb|EGZ69204.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 434
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 82 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 113
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV Y EA A++AL+N GR + A D+
Sbjct: 40 GRSRGFGFVRYANDAEADAAMQALNNEEFDGRRIRVDKASDR 81
>gi|158706381|sp|Q4R2Z0.2|RBM46_MACFA RecName: Full=Probable RNA-binding protein 46; AltName:
Full=RNA-binding motif protein 46
Length = 485
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYG--RHLIFSVAHDQ 45
G RG AFV+Y T+QEA A+ +L +T + G R LI +A D+
Sbjct: 240 GRFRGIAFVQYNTRQEAAAAIRSLHDTPMEGVPRPLIVKLADDK 283
>gi|340383281|ref|XP_003390146.1| PREDICTED: hypothetical protein LOC100639457 [Amphimedon
queenslandica]
Length = 640
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
M+ G +GF + ++ +K AQNA++ LS T L GR++ +A+ +
Sbjct: 432 MRDGRPKGFGYADFSSKSVAQNAIKTLSETDLLGRNVRLDLANSR 476
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV Y + +E +NA+ L + L GR + +VA +
Sbjct: 215 GRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIRVTVAESK 256
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G RGF FV Y + +EA +A++A+ L+GR +
Sbjct: 78 GRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRV 111
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y +EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y + EAQ A+E L + GR ++ A
Sbjct: 54 GDSRGFAFVRYKYQDEAQKAVEKLDGRVVDGREIMVRFA 92
>gi|321462371|gb|EFX73395.1| hypothetical protein DAPPUDRAFT_307711 [Daphnia pulex]
Length = 313
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 29/42 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
HRGF+F+EY ++A A++ ++++ L+G+ + ++A + I
Sbjct: 49 HRGFSFIEYELAEDAAAAIDNMNDSELFGKTITVNIARPRKI 90
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + + +EA +A++AL L+GR + + A D+
Sbjct: 78 GRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|119625308|gb|EAX04903.1| hypothetical protein MGC27016, isoform CRA_b [Homo sapiens]
gi|193785107|dbj|BAG54260.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+ FV++ ++ A A+E L+N+H GR L VAH
Sbjct: 227 GTSRGYGFVQFAAQESADIAIENLNNSHFEGRQL--HVAH 264
>gi|332217539|ref|XP_003257916.1| PREDICTED: probable RNA-binding protein 46 isoform 2 [Nomascus
leucogenys]
Length = 470
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|327272940|ref|XP_003221242.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Anolis carolinensis]
Length = 216
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K+ AQN AL+N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCSRALNNKQLFGRVIKASIAID 88
>gi|449265844|gb|EMC76974.1| La-related protein 7 [Columba livia]
Length = 585
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSN 29
GN +GFAFVE+ TK++A+ A+E L+N
Sbjct: 162 GNPKGFAFVEFETKEQAEKAIEFLNN 187
>gi|380028093|ref|XP_003697746.1| PREDICTED: probable RNA-binding protein 18-like [Apis florea]
Length = 212
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV Y T Q+A+ A +AL N + +++I AH
Sbjct: 72 GQPRGYAFVTYKTIQDAKTAKDALHNLKVGAKNIIVRWAH 111
>gi|344267834|ref|XP_003405770.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1-like [Loxodonta africana]
Length = 217
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
+G AF+ ++ K+ AQN A++N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKESAQNCTRAINNKQLFGRMIKASIAIDN 89
>gi|344239872|gb|EGV95975.1| putative RNA-binding protein 46 [Cricetulus griseus]
Length = 503
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 108 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 164
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 165 EKKKEEILDEMKKVT 179
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+G+ F+EY T Q AQ+A+ A++ L G+HL
Sbjct: 264 HKGYGFIEYGTVQAAQDAISAMNLFDLGGQHL 295
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G RGF FV Y + +EA +A++AL L+GR +
Sbjct: 78 GRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRV 111
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FV + T +EAQ AL L+ T L+GR L ++A
Sbjct: 346 GLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQ 385
>gi|149048270|gb|EDM00846.1| similar to hypothetical protein MGC27016 (predicted) [Rattus
norvegicus]
Length = 468
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|114596513|ref|XP_528865.2| PREDICTED: probable RNA-binding protein 46 isoform 2 [Pan
troglodytes]
gi|397504054|ref|XP_003822624.1| PREDICTED: probable RNA-binding protein 46 [Pan paniscus]
gi|402870690|ref|XP_003899339.1| PREDICTED: probable RNA-binding protein 46 [Papio anubis]
Length = 470
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|116181372|ref|XP_001220535.1| hypothetical protein CHGG_01314 [Chaetomium globosum CBS 148.51]
gi|88185611|gb|EAQ93079.1| hypothetical protein CHGG_01314 [Chaetomium globosum CBS 148.51]
Length = 317
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIIS 48
G + G+ F E+ T++EA ALEAL + L+ R + + + S
Sbjct: 58 GRNPGYCFAEFTTREEADRALEALPGSALFNRQIKVGPCNPKTPS 102
>gi|432854500|ref|XP_004067931.1| PREDICTED: nucleolin-like isoform 4 [Oryzias latipes]
Length = 655
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ ++A+ ALE +NT + GR +
Sbjct: 451 GRPKGFAFIEFENAEDAKEALENFNNTEIEGRSI 484
>gi|365991313|ref|XP_003672485.1| hypothetical protein NDAI_0K00510 [Naumovozyma dairenensis CBS 421]
gi|343771261|emb|CCD27242.1| hypothetical protein NDAI_0K00510 [Naumovozyma dairenensis CBS 421]
Length = 452
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 30/43 (69%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
+K+ ++R FA+++ +K++AQ+ ++ L+N L G L+ +++
Sbjct: 150 LKYNSNRRFAYIDLCSKEDAQSVIQNLNNMDLNGYKLVVKISN 192
>gi|326926008|ref|XP_003209198.1| PREDICTED: nucleolin-like [Meleagris gallopavo]
Length = 425
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +G+AFVE+ T ++A+ AL + +NT + GR +
Sbjct: 235 GRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAI 268
>gi|189465920|ref|ZP_03014705.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
gi|189434184|gb|EDV03169.1| hypothetical protein BACINT_02283 [Bacteroides intestinalis DSM
17393]
Length = 128
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE +E Q A++ L+ T G+++ SVA
Sbjct: 39 GRSRGFGFVEMPNDEEGQKAIDTLNETEFEGKNIAVSVAR 78
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus
scrofa]
Length = 362
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 53 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 84
>gi|194208379|ref|XP_001500866.2| PREDICTED: probable RNA-binding protein 46 [Equus caballus]
Length = 532
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHLY-GRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + GR + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGRFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|344236628|gb|EGV92731.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 271
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 109 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 140
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ + ++A+ A+++ +NT + GR +
Sbjct: 498 GRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSI 531
>gi|189091838|ref|XP_001929752.1| hypothetical protein [Podospora anserina S mat+]
gi|188219272|emb|CAP49252.1| unnamed protein product [Podospora anserina S mat+]
Length = 488
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 134 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 165
>gi|118790804|ref|XP_318826.3| AGAP009742-PA [Anopheles gambiae str. PEST]
gi|116118108|gb|EAA14228.3| AGAP009742-PA [Anopheles gambiae str. PEST]
Length = 174
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++AL+A+ L GR L +A
Sbjct: 63 RGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMAR 99
>gi|432854496|ref|XP_004067929.1| PREDICTED: nucleolin-like isoform 2 [Oryzias latipes]
Length = 651
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ ++A+ ALE +NT + GR +
Sbjct: 447 GRPKGFAFIEFENAEDAKEALENFNNTEIEGRSI 480
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|340519275|gb|EGR49514.1| predicted protein [Trichoderma reesei QM6a]
Length = 403
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF--QVMERAKE 62
N RG FV YV + A+ A EA+++ S+ HD+++++ T M RA+E
Sbjct: 209 NQRGVGFVTYVNEANAEFAKEAMAHQ---------SLDHDEVLNVRWATADPNPMARARE 259
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE +R A+F E+ G + K+RK
Sbjct: 260 ARRIEEQAAEAIRRALPAEFVAEIEG--KDPEARKRRK 295
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF F+ Y + +EA +A++AL L+GR + + A+++
Sbjct: 80 GRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|194380344|dbj|BAG63939.1| unnamed protein product [Homo sapiens]
Length = 485
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|148683481|gb|EDL15428.1| mCG21951 [Mus musculus]
Length = 468
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V + Q AL+ L+ + L+GR L S
Sbjct: 124 KFGQPKGFAYVEFVEVEAVQEALQ-LNESELHGRQLKVS 161
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y + EAQ A+E L + GR ++ A
Sbjct: 55 GDSRGFAFVRYKYEDEAQKAVERLDGRLVDGREIMVQFA 93
>gi|312130254|ref|YP_003997594.1| rnp-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
gi|311906800|gb|ADQ17241.1| RNP-1 like RNA-binding protein [Leadbetterella byssophila DSM
17132]
Length = 90
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FVE EAQ A+ L+ T L GR ++ VA
Sbjct: 39 GRSKGFGFVEMPNDAEAQAAINGLNETELDGRTIVVKVAE 78
>gi|303324711|pdb|2KXF|A Chain A, Solution Structure Of The First Two Rrm Domains Of
Fbp-Interacting Repressor (Fir)
gi|303324712|pdb|2KXH|A Chain A, Solution Structure Of The First Two Rrm Domains Of Fir
In The Complex With Fbp Nbox Peptide
Length = 199
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 54 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 85
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
KFG +GFA+VE+V + Q AL LS + L+GR L
Sbjct: 123 KFGQPKGFAYVEFVETEAVQEAL-LLSESELHGRQL 157
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ + ++A+ A+++ +NT + GR +
Sbjct: 499 GRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSI 532
>gi|429862689|gb|ELA37325.1| peptidyl prolyl cis-trans isomerase [Colletotrichum
gloeosporioides Nara gc5]
Length = 151
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VEY ++A+ A++ + + +GR L S A
Sbjct: 52 HRGFAYVEYEDIEDAKEAIDNMDQSEFFGRVLKVSAA 88
>gi|300794578|ref|NP_001179648.1| probable RNA-binding protein 46 [Bos taurus]
gi|296478817|tpg|DAA20932.1| TPA: RNA binding motif protein 46 [Bos taurus]
gi|440907847|gb|ELR57939.1| Putative RNA-binding protein 46 [Bos grunniens mutus]
Length = 533
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAFVE+ + ++A+ A+++ +NT + GR +
Sbjct: 498 GRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSI 531
>gi|240849499|ref|NP_001155685.1| serine/arginine rich splicing factor-like [Acyrthosiphon pisum]
gi|239790824|dbj|BAH71947.1| ACYPI006902 [Acyrthosiphon pisum]
Length = 153
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV + K++A++AL+A+ L GR L +A
Sbjct: 55 RGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMAR 91
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319289|gb|EFH49711.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 202
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V + Q AL+ L+ + L+GR L S
Sbjct: 124 KFGQPKGFAYVEFVEVEAVQEALQ-LNESELHGRQLKVS 161
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|380472149|emb|CCF46923.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 152
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VEY ++A+ A++ + + +GR + S A
Sbjct: 52 HRGFAYVEYEDAEDAKEAIDNMDQSEFFGRVIKVSAA 88
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A +A++ ++++ L GR + ++A
Sbjct: 46 HRGFAFIEYENYEDAASAIDNMNDSELCGRTIRVNLA 82
>gi|170088360|ref|XP_001875403.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650603|gb|EDR14844.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 167
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFV Y + +AQ+A++ + L+GR + ++A
Sbjct: 73 HRGFAFVTYGSSSDAQDAIDNMDMNELHGRVIKVNLA 109
>gi|47212475|emb|CAF90271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSV 41
H+GFAFVEY + AQ ALE +++ L GR++ SV
Sbjct: 156 HKGFAFVEYEMPEAAQLALEQMNSVVLGGRNIKASV 191
>gi|395331590|gb|EJF63971.1| hypothetical protein DICSQDRAFT_168016 [Dichomitus squalens
LYAD-421 SS1]
Length = 325
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV+Y K +A+ AL ++ L GR L+ + A+
Sbjct: 102 GKPRGYAFVQYSNKDDAEKALTHANDKLLRGRKLVVTYAN 141
>gi|335293716|ref|XP_003357034.1| PREDICTED: probable RNA-binding protein 46 isoform 2 [Sus scrofa]
Length = 485
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|134025329|gb|AAI35084.1| LOC562370 protein [Danio rerio]
Length = 379
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 132 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 163
>gi|427719544|ref|YP_007067538.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
gi|427351980|gb|AFY34704.1| RNP-1 like RNA-binding protein [Calothrix sp. PCC 7507]
Length = 101
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RGF FVE T+ E A+EAL N GR L + A +I
Sbjct: 39 GRVRGFGFVEMETEAEETKAIEALDNAEWMGRSLKVNKAKPKI 81
>gi|169404577|pdb|2QFJ|A Chain A, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
gi|169404578|pdb|2QFJ|B Chain B, Crystal Structure Of First Two Rrm Domains Of Fir Bound To
Ssdna From A Portion Of Fuse
Length = 216
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 69 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 100
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G RGF FV Y + +EA +A++A+ L+GR +
Sbjct: 78 GRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRV 111
>gi|432854498|ref|XP_004067930.1| PREDICTED: nucleolin-like isoform 3 [Oryzias latipes]
Length = 694
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ ++A+ ALE +NT + GR +
Sbjct: 490 GRPKGFAFIEFENAEDAKEALENFNNTEIEGRSI 523
>gi|312373610|gb|EFR21320.1| hypothetical protein AND_17210 [Anopheles darlingi]
Length = 170
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
RGFAFV + K++A++AL+A+ L GR L +A
Sbjct: 56 RGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMA 91
>gi|261855638|ref|YP_003262921.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
gi|261836107|gb|ACX95874.1| RNP-1 like RNA-binding protein [Halothiobacillus neapolitanus c2]
Length = 98
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M G +GFAFVE K A+E L NT L GR++
Sbjct: 37 MATGRSKGFAFVEMADKAAGMTAIEQLDNTDLNGRNI 73
>gi|189499100|ref|YP_001958570.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
gi|189494541|gb|ACE03089.1| RNP-1 like RNA-binding protein [Chlorobium phaeobacteroides BS1]
Length = 90
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GF FVE EAQNA+++L ++ L GR +
Sbjct: 39 GRSKGFGFVEMPNDDEAQNAIDSLHDSDLNGRSI 72
>gi|296195353|ref|XP_002745373.1| PREDICTED: probable RNA-binding protein 46 [Callithrix jacchus]
Length = 485
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHL-YGRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 94 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 150
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 151 EKKKEEILDEMKKVT 165
>gi|224156534|ref|XP_002199861.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like, partial
[Taeniopygia guttata]
Length = 156
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 53 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 84
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV ++ K++A++A++A+ L GR L +A
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|307187764|gb|EFN72736.1| Probable RNA-binding protein 18 [Camponotus floridanus]
Length = 212
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV Y T Q+A+ A +AL N + +++I AH
Sbjct: 72 GQPRGYAFVTYKTIQDAKTAKDALHNLKVGAKNIIVRWAH 111
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE+V + Q AL+ L+ + L+GR L S
Sbjct: 124 KFGQPKGFAYVEFVEVEAVQEALQ-LNESELHGRQLKVS 161
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV + + + A +AL A+ L GR++ S A+D+
Sbjct: 74 GRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115
>gi|351713220|gb|EHB16139.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 264
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K AQN A++N L+GR + S+A D
Sbjct: 161 SKGVAFILFLDKDSAQNCTRAINNKQLFGRVIKASIAID 199
>gi|351710775|gb|EHB13694.1| Zinc finger CCHC-type and RNA-binding motif-containing protein 1
[Heterocephalus glaber]
Length = 207
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K AQN A++N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKNSAQNCTRAINNKQLFGRAIKASIAID 88
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF FV Y T E Q A+ L T + GR + +VA
Sbjct: 221 GRSRGFGFVTYGTSDEVQKAVSNLDGTDMDGRQIRVTVA 259
>gi|195621804|gb|ACG32732.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 260
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A +A++ ++++ L GR + ++A
Sbjct: 46 HRGFAFIEYENYEDAASAIDNMNDSELCGRTIRVNLA 82
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
RGFAF+ Y ++E++NA+E + L GR + VA ++
Sbjct: 157 RGFAFLSYANEEESKNAMEGMHGKFLDGRVIFVEVAKRKV 196
>gi|340905324|gb|EGS17692.1| putative nucleolar protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 834
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGF FV + +A A E L N + GRHL +AH
Sbjct: 87 RGFGFVAFTDPDDALEAKEKLQNFYFEGRHLKLDIAH 123
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea
mays]
Length = 248
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G+ RGFAFV Y EAQ A++ L ++ GR+++ A+
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFAN 93
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|389637404|ref|XP_003716339.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642158|gb|EHA50020.1| RNP domain-containing protein [Magnaporthe oryzae 70-15]
Length = 428
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 81 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 112
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 197 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 233
>gi|310794589|gb|EFQ30050.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 152
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VEY ++A+ A++ + + +GR + S A
Sbjct: 52 HRGFAYVEYEDAEDAKEAIDNMDQSEFFGRVIKVSAA 88
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A +A++ ++++ L GR + ++A
Sbjct: 46 HRGFAFIEYENYEDAASAIDNMNDSELCGRTIRVNLA 82
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|385808623|ref|YP_005845019.1| RRM domain-containing protein [Ignavibacterium album JCM 16511]
gi|383800671|gb|AFH47751.1| RRM domain protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
+GF FVE+ T+ EA A+ AL+ + + GR++I S A +
Sbjct: 43 SKGFGFVEFETEAEASAAINALNGSEVKGRNIIVSEAKPK 82
>gi|350409810|ref|XP_003488851.1| PREDICTED: probable RNA-binding protein 18-like [Bombus impatiens]
Length = 203
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV Y T Q+A+ A +AL N + +++I AH
Sbjct: 63 GQPRGYAFVTYKTIQDAKTAKDALHNLKVGSKNIIVRWAH 102
>gi|341038578|gb|EGS23570.1| putative cyclophilin protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 153
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFA+VE+ ++A+ A++ + + L+GR + S A
Sbjct: 54 HRGFAYVEFEDPEDAKEAIDNMDQSELFGRVIKVSAA 90
>gi|340718607|ref|XP_003397756.1| PREDICTED: probable RNA-binding protein 18-like [Bombus
terrestris]
Length = 196
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFV Y T Q+A+ A +AL N + +++I AH
Sbjct: 56 GQPRGYAFVTYKTIQDAKTAKDALHNLKVGSKNIIVRWAH 95
>gi|299739068|ref|XP_002910157.1| hypothetical protein CC1G_15434 [Coprinopsis cinerea okayama7#130]
gi|298403607|gb|EFI26663.1| hypothetical protein CC1G_15434 [Coprinopsis cinerea okayama7#130]
Length = 499
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RG+AFVEY +EA AL L GR L+ + AH
Sbjct: 153 GKPRGYAFVEYGVPEEAAKALSIAHGKLLRGRKLVVTFAH 192
>gi|336259093|ref|XP_003344351.1| hypothetical protein SMAC_08294 [Sordaria macrospora k-hell]
gi|380092698|emb|CCC09451.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 433
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 83 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 114
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|357421081|ref|YP_004928530.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
gi|354803591|gb|AER40705.1| RNP-1 RNA-binding protein [Blattabacterium sp. (Mastotermes
darwiniensis) str. MADAR]
Length = 89
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+GF F+E ++ A+ A+E L+ T GR++I SVA
Sbjct: 47 KGFGFIEMSNEENAKKAIEKLNGTEFMGRNIIVSVA 82
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE ++ L GR++
Sbjct: 181 HKGFAFVEYEIPEAAQLALEQMNGVMLGGRNI 212
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 91 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 129
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFVE+ ++A A++ ++++ L+GR + ++A
Sbjct: 47 HRGFAFVEFEQAEDAAAAIDNMNDSELFGRTIRVNIA 83
>gi|195150527|ref|XP_002016202.1| GL11464 [Drosophila persimilis]
gi|194110049|gb|EDW32092.1| GL11464 [Drosophila persimilis]
Length = 302
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A +A++ ++++ L GR + ++A
Sbjct: 46 HRGFAFIEYEQAEDAASAIDNMNDSELCGRTIRVNLA 82
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|395328720|gb|EJF61110.1| hypothetical protein DICSQDRAFT_161593 [Dichomitus squalens
LYAD-421 SS1]
Length = 425
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII---SIIAPTFQVMERA 60
G +G+AFV++ + A +AL N HL GR L+ A + + AP + +
Sbjct: 287 GKCKGWAFVDFTATEHATSALTNPRNHHLNGRKLVVEYASPEAVRRGGGGAPREKKPKEV 346
Query: 61 KEGESLEELRARTAAQFTDEVNGFQNSTKLSKKR 94
+G E +T EV G + + K+R
Sbjct: 347 GQGMKRERPARKTKDDTEKEVGGKEAERPMKKRR 380
>gi|396499673|ref|XP_003845532.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
gi|312222113|emb|CBY02053.1| hypothetical protein LEMA_P008400.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 129 GMSKGCGIVEYATREQAQNAVSTLSNQNLMGR 160
>gi|226293434|gb|EEH48854.1| RNP domain-containing protein [Paracoccidioides brasiliensis Pb18]
Length = 478
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 137 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 168
>gi|171680237|ref|XP_001905064.1| hypothetical protein [Podospora anserina S mat+]
gi|170939745|emb|CAP64971.1| unnamed protein product [Podospora anserina S mat+]
Length = 176
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y +AQ A+ A+ N GR + A D
Sbjct: 40 GRSRGFGFVRYTNPDDAQKAISAMKNIEFDGRQIRVDKASD 80
>gi|116790938|gb|ABK25797.1| unknown [Picea sitchensis]
Length = 300
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|395841539|ref|XP_003793592.1| PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing
protein 1 [Otolemur garnettii]
Length = 217
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AF+ ++ K AQN A++N L+GR + S+A D
Sbjct: 51 KGVAFILFLDKDSAQNCTRAINNKQLFGRMIKASIAID 88
>gi|302761116|ref|XP_002963980.1| hypothetical protein SELMODRAFT_142186 [Selaginella
moellendorffii]
gi|300167709|gb|EFJ34313.1| hypothetical protein SELMODRAFT_142186 [Selaginella
moellendorffii]
Length = 174
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
HRGF FV Y+ + +A A++ + N+ L+G+ L + A
Sbjct: 48 HRGFGFVTYLERDDAAAAMDNMHNSELFGKVLTVNYAQ 85
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G +GF FV + T +EAQ AL L+ T L+GR L ++A
Sbjct: 346 GLSKGFGFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQ 385
>gi|269859929|ref|XP_002649688.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
gi|220066883|gb|EED44353.1| RNA-binding protein MRD1 [Enterocytozoon bieneusi H348]
Length = 421
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF F+ + + +E SN HLYGR L+ A
Sbjct: 381 GRSRGFGFITFEDPKTIDKIIEQCSNMHLYGRRLVLEKAQ 420
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTFQVMERAKEG 63
G RGF FV + T Q+ + AL+ ++ + GR L ++A ++ AP+ + EG
Sbjct: 131 GRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNLA-----AVKAPSSPSVTEENEG 185
Query: 64 ESLE 67
S++
Sbjct: 186 SSVD 189
>gi|330913095|ref|XP_003296184.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
gi|311331880|gb|EFQ95720.1| hypothetical protein PTT_05285 [Pyrenophora teres f. teres 0-1]
Length = 481
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ +LSN +L GR
Sbjct: 131 GMSKGCGIVEYATREQAQNAVASLSNQNLMGR 162
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 178 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 209
>gi|125808073|ref|XP_001360625.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
gi|54635797|gb|EAL25200.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
Length = 302
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAF+EY ++A +A++ ++++ L GR + ++A
Sbjct: 46 HRGFAFIEYEQAEDAASAIDNMNDSELCGRTIRVNLA 82
>gi|452821788|gb|EME28814.1| hypothetical protein Gasu_37050 [Galdieria sulphuraria]
Length = 124
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIA 51
HRGFAF+E+ ++A +A E + ++ ++GR L VA+ + SI A
Sbjct: 44 HRGFAFIEFELPEDAASAKENMDDSEMFGRRL--RVAYTRPSSIGA 87
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RG+ FV Y TK E + ALE ++ L GR + S+A +
Sbjct: 231 GKSRGYGFVSYSTKSEMETALETINELELEGRVIRVSLAEGK 272
>gi|167560891|ref|NP_001107973.1| zinc finger CCHC-type and RNA binding motif 1 [Xenopus (Silurana)
tropicalis]
gi|165970829|gb|AAI58311.1| zcrb1 protein [Xenopus (Silurana) tropicalis]
Length = 215
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AFV ++ K+ +QN + L+N L+GR + S+A D
Sbjct: 51 KGVAFVLFLDKESSQNCVRGLNNKQLFGRAIKASIAID 88
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
HRGFAFVE+ ++A A++ ++++ L+GR + +VA
Sbjct: 47 HRGFAFVEFEQAEDAVAAIDNMNDSELFGRTIRVNVA 83
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|442771473|gb|AGC72159.1| RNA-binding protein [uncultured bacterium A1Q1_fos_560]
Length = 98
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FVE EAQ A+ AL+ T GR L + A Q
Sbjct: 41 GQSRGFGFVEMSGDSEAQAAINALNGTQFGGRTLTVNEARPQ 82
>gi|357148211|ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
distachyon]
Length = 283
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAVDRLDGRNVDGRNIMVQFA 92
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGFAFVEY + AQ A++ L+ T GR+L + A+
Sbjct: 44 GRPRGFAFVEYTDESGAQRAVQELNGTSFNGRNLRVNFAN 83
>gi|38346812|emb|CAD41379.2| OSJNBa0088A01.19 [Oryza sativa Japonica Group]
Length = 92
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
RGFAF+ Y +++E++NA+E + L GR + VA +
Sbjct: 51 RGFAFLSYASEEESKNAMEGMQGKFLDGRVIFVEVARQR 89
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|449299089|gb|EMC95103.1| hypothetical protein BAUCODRAFT_123579 [Baudoinia compniacensis
UAMH 10762]
Length = 145
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
HRGF +VE+ ++A+ A++ + + LYGR + + A Q
Sbjct: 52 HRGFGYVEFALPEDAREAIDNMDQSELYGRVIKVNQAKPQ 91
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G +GFAFVE T+ EA+ A+E L+ L GR + S A Q
Sbjct: 41 GRSKGFAFVEMSTETEARAAIEKLNGMDLAGRAMNISEAKPQ 82
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 25/34 (73%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GFAF+E+ + ++A+ A+++ +NT + GR +
Sbjct: 507 GRAKGFAFIEFSSVEDAKEAMDSCNNTEIEGRSI 540
>gi|242015115|ref|XP_002428219.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
gi|212512780|gb|EEB15481.1| RNA recognition motif containing protein, putative [Pediculus
humanus corporis]
Length = 221
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
+G AFV ++ K++AQN + L+ ++GR L S+A D
Sbjct: 53 KGVAFVLFLKKEDAQNCCKMLNGKEMFGRTLKASIASD 90
>gi|358392437|gb|EHK41841.1| hypothetical protein TRIATDRAFT_134691 [Trichoderma atroviride IMI
206040]
Length = 356
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 5 NHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF--QVMERAKE 62
N RG AFV YV + A+ A EA+++ S+ HD+++++ T M RA+E
Sbjct: 165 NSRGVAFVTYVNEANAEFAKEAMAHQ---------SLDHDEVLNVRWATEDPNPMARARE 215
Query: 63 GESLEE-----LRARTAAQFTDEVNGFQNSTKLSKKRK 95
+EE +R A++ E+ G ++ K+RK
Sbjct: 216 ARRIEEQAAEAIRRALPAEYIAEIEGKDPESR--KRRK 251
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E A+E L+ T + GR + ++A
Sbjct: 379 GRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 417
>gi|237844761|ref|XP_002371678.1| RNA recognition motif domain-containing protein [Toxoplasma
gondii ME49]
gi|211969342|gb|EEB04538.1| RNA recognition motif domain-containing protein [Toxoplasma
gondii ME49]
gi|221480864|gb|EEE19285.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 274
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLY 33
RG+AFV Y T +AQNA+EAL+ HL+
Sbjct: 46 RGWAFVTYETVYDAQNAIEALNEKHLF 72
>gi|88601667|ref|YP_501845.1| RNA recognition motif-containing protein [Methanospirillum
hungatei JF-1]
gi|88187129|gb|ABD40126.1| RNA-binding region RNP-1 (RNA recognition motif)
[Methanospirillum hungatei JF-1]
Length = 103
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
++GF FVE T +EAQ AL+AL++T GR +
Sbjct: 38 NKGFGFVEMGTSEEAQAALDALNDTEFDGRTM 69
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu
rubripes]
Length = 229
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
RGFAFV ++ K++A++A++A+ L GR L +A
Sbjct: 55 RGFAFVRFLDKRDAEDAMDAMDGALLDGRELRVQMAR 91
>gi|168015818|ref|XP_001760447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688461|gb|EDQ74838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+ G RGFAFV Y EAQ A+E L + GR+++ A
Sbjct: 52 RTGESRGFAFVRYKYADEAQKAIERLDGRTVDGRNIVVQSA 92
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 112 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 143
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RGF F+ Y +++A +A+ AL L+GR+L S A
Sbjct: 69 GRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAA 107
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L ++ GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRNVDGRNIMVQFA 92
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHD 44
G RGF FV Y ++AQ A++A++N GR + A D
Sbjct: 40 GRSRGFGFVRYSQDEDAQKAIDAMNNVEFDGRTIRVDRASD 80
>gi|297805686|ref|XP_002870727.1| hypothetical protein ARALYDRAFT_355983 [Arabidopsis lyrata subsp.
lyrata]
gi|297316563|gb|EFH46986.1| hypothetical protein ARALYDRAFT_355983 [Arabidopsis lyrata subsp.
lyrata]
Length = 552
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAPTF 54
G H G+ FVE+ + EA+ ALE S +L+G + +A+ + + P +
Sbjct: 88 GKHSGYGFVEFASANEAKKALEKKSGEYLHGHRIFLHLANYKKPAYFLPKY 138
>gi|302768509|ref|XP_002967674.1| hypothetical protein SELMODRAFT_69014 [Selaginella
moellendorffii]
gi|300164412|gb|EFJ31021.1| hypothetical protein SELMODRAFT_69014 [Selaginella
moellendorffii]
Length = 138
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
HRGF FV Y+ + +A A++ + N+ L+G+ L + A
Sbjct: 36 HRGFGFVTYLERDDAAAAMDNMHNSELFGKVLTVNYAQ 73
>gi|95007498|emb|CAJ20722.1| RNA-binding protein, putative [Toxoplasma gondii RH]
Length = 399
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLY 33
RG+AFV Y T +AQNA+EAL+ HL+
Sbjct: 46 RGWAFVTYETVYDAQNAIEALNEKHLF 72
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea
mays]
Length = 274
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G+ RGFAFV Y EAQ A++ L + GR+++ A
Sbjct: 54 GDSRGFAFVRYKYADEAQKAIDRLDGRDVDGRNIMVQFA 92
>gi|449451417|ref|XP_004143458.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449496421|ref|XP_004160130.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
KFG+ +GFA+VE+V + Q AL L+ T L+GR L
Sbjct: 118 KFGHPKGFAYVEFVEAEAIQEAL-LLNETELHGRQL 152
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E A+E L+ T + GR + ++A
Sbjct: 263 GRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 301
>gi|320031479|gb|EFW13442.1| hypothetical protein CPSG_09988 [Coccidioides posadasii str.
Silveira]
Length = 382
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 50 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 81
>gi|210075933|ref|XP_503927.2| YALI0E14058p [Yarrowia lipolytica]
gi|199426916|emb|CAG79520.2| YALI0E14058p [Yarrowia lipolytica CLIB122]
Length = 417
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
M G +G VEY T++EA+NA+ L+N L GR
Sbjct: 123 MPNGRSKGCGIVEYSTREEAENAVNTLTNQELMGR 157
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH 43
G RGF FVE + QEAQ A+ L+ + GR+L+ + A
Sbjct: 41 GRSRGFGFVEMGSDQEAQAAIAGLNGKEMDGRNLMVNEAR 80
>gi|387169522|gb|AFJ66183.1| hypothetical protein 11M19.19 [Arabidopsis halleri]
Length = 228
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISI 49
KFG +GFA+VE+V + QN+L L+ + L+GR + S + +
Sbjct: 140 KFGQPKGFAYVEFVEVEAVQNSL-ILNESELHGRQIKVSAKRTNVPGM 186
>gi|387907184|ref|YP_006337520.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
gi|387582077|gb|AFJ90855.1| RNA-binding protein [Blattabacterium sp. (Blaberus giganteus)]
Length = 90
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
+GF F+E ++ A+ A+E L+ T L GR++I S A
Sbjct: 47 KGFGFIEMSNEENAKQAIEKLNGTELMGRNIIVSAA 82
>gi|384253327|gb|EIE26802.1| hypothetical protein COCSUDRAFT_46235 [Coccomyxa subellipsoidea
C-169]
Length = 467
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA---HD 44
G +GFAF+EY Q AQ+A+ L L GR +I A HD
Sbjct: 16 GRQKGFAFIEYYDWQTAQSAIRNLDGYDLNGRKVIVKFAEKDHD 59
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G+ RG+ FV + ++ +AQNA++++ L GR L
Sbjct: 198 MQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPL 234
>gi|255074381|ref|XP_002500865.1| predicted protein [Micromonas sp. RCC299]
gi|226516128|gb|ACO62123.1| predicted protein [Micromonas sp. RCC299]
Length = 216
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSV 41
K+ N +GFA+VE++ QNA++ L++T ++GR L S
Sbjct: 117 KYDNPKGFAYVEFLEADAVQNAIK-LTDTEIHGRKLRVSA 155
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 2 KFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFS 40
KFG +GFA+VE++ + Q AL AL+ + L+GR L S
Sbjct: 125 KFGQPKGFAYVEFLEVEAVQEAL-ALNESELHGRQLKVS 162
>gi|452004844|gb|EMD97300.1| hypothetical protein COCHEDRAFT_1164036 [Cochliobolus
heterostrophus C5]
Length = 475
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 133 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 164
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 188 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 219
>gi|432112328|gb|ELK35127.1| Putative RNA-binding protein 18 [Myotis davidii]
Length = 147
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQI 46
G RG+ FV + TKQEA+ A++ L+ + + L+ A Q+
Sbjct: 66 GQPRGYCFVNFETKQEAEQAIQCLNGKLVLSKKLVVRWARAQV 108
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVA 42
G RG+ FV Y TK+E A+E L+ T + GR + ++A
Sbjct: 262 GRSRGYGFVCYSTKEEMDQAIETLNGTEIEGREIRVNLA 300
>gi|148927167|ref|ZP_01810792.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
gi|147887382|gb|EDK72831.1| RNP-1 like RNA-binding protein [candidate division TM7 genomosp.
GTL1]
Length = 108
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
G +GF FV YV ++A A++ L N+ L GR++
Sbjct: 41 GRSKGFGFVTYVNDEDADTAIKELDNSELDGRNI 74
>gi|429852984|gb|ELA28088.1| rnp domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 415
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 83 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 114
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
M+ G RG+ FV + +++EAQ A++A+ L GR L
Sbjct: 167 MQTGGSRGYGFVSFGSQEEAQKAMDAMQGHELNGRPL 203
>gi|303281722|ref|XP_003060153.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458808|gb|EEH56105.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 123
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQII 47
+RGF FV + K +A+ A+E + N LYGR + + A Q I
Sbjct: 36 NRGFGFVTFEEKDDAKEAMENMHNAELYGRVIRCNYAKPQAI 77
>gi|88602845|ref|YP_503023.1| RNA recognition motif-containing protein [Methanospirillum
hungatei JF-1]
gi|88188307|gb|ABD41304.1| RNA-binding region RNP-1 (RNA recognition motif)
[Methanospirillum hungatei JF-1]
Length = 112
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 MKFGNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
+K +GF FVE + +EAQNA+++L+ T GR L
Sbjct: 33 VKLIEQKGFGFVEMSSSEEAQNAMDSLNQTEFGGRTL 69
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
G RGF FV Y + EA A++A++N GR + A D+
Sbjct: 40 GRSRGFGFVRYAQETEADAAMQAMNNEEFDGRRIRVDKASDR 81
>gi|451853414|gb|EMD66708.1| hypothetical protein COCSADRAFT_158789 [Cochliobolus sativus
ND90Pr]
Length = 477
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGR 35
G +G VEY T+++AQNA+ LSN +L GR
Sbjct: 130 GMSKGCGIVEYATREQAQNAVATLSNQNLMGR 161
>gi|367009880|ref|XP_003679441.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
gi|359747099|emb|CCE90230.1| hypothetical protein TDEL_0B01010 [Torulaspora delbrueckii]
Length = 210
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNT-HLYGRHL------IFSVAHDQIISIIAPTFQVME 58
H+GFAFVE+ T ++ Q ++ L+NT LY R L + S D I I P +V
Sbjct: 50 HQGFAFVEFYTPEDCQYVVQLLNNTVQLYDRFLKVRKANVQSSGSDTIDVTIQPIAKVFV 109
Query: 59 RAKEGESLEELRARTAAQF 77
+ + E +R +F
Sbjct: 110 KNLDPSIDEPHLSRLFGKF 128
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 132 HKGFAFVEYEMPEAAQLALEQMNSVVLGGRNI 163
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 7 RGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIAP 52
RGFAF+ Y T++E+Q A+E + L GR + VA + S +AP
Sbjct: 129 RGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPR--SELAP 172
>gi|426345799|ref|XP_004040586.1| PREDICTED: probable RNA-binding protein 46 [Gorilla gorilla
gorilla]
Length = 514
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 1 MKF-GNHRGFAFVEYVTKQEAQNALEALSNTHLY-GRHLIFSVAHDQIISIIAPTFQVME 58
M+F G +RG+AFV Y TK+EAQ A+ L+N + G+ + V+ D I + +
Sbjct: 75 MEFSGENRGYAFVMYTTKEEAQLAIRILNNYEIRPGKFIGVCVSLDNCRLFIG---AIPK 131
Query: 59 RAKEGESLEELRART 73
K+ E L+E++ T
Sbjct: 132 EKKKEEILDEMKKVT 146
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHL 37
H+GFAFVEY + AQ ALE +++ L GR++
Sbjct: 192 HKGFAFVEYEVPEAAQLALEQMNSVMLGGRNI 223
>gi|340376678|ref|XP_003386859.1| PREDICTED: probable RNA-binding protein 18-like [Amphimedon
queenslandica]
Length = 227
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAH-DQII 47
G RG+ F+EY T++EA+ A E ++ G+++I A DQ I
Sbjct: 96 GEPRGYCFIEYSTREEAEKAKETMNGKVALGKNIIVDWARPDQYI 140
>gi|330936367|ref|XP_003305362.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
gi|311317661|gb|EFQ86548.1| hypothetical protein PTT_18177 [Pyrenophora teres f. teres 0-1]
Length = 1266
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 4 GNHRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQ 45
GN+RGF +V Y TK+ A A+ + ++G L+ +A D+
Sbjct: 1032 GNNRGFCYVVYETKESADAAVAEMHEKEMWGLKLMVEIATDR 1073
>gi|126330203|ref|XP_001365208.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Monodelphis
domestica]
Length = 301
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 6 HRGFAFVEYVTKQEAQNALEALSNTHLYGRHLIFSVAHDQIISIIA--PTFQVMERAKE- 62
HRGFAFVE+ ++A A++ ++ + L+GR + ++A I + P + E K+
Sbjct: 46 HRGFAFVEFELAEDAAAAIDNMNESELFGRTIRVNLAKPMKIKEGSSRPVWSDDEWLKKF 105
Query: 63 -GESLEELRARTAAQ 76
G++LEE + A++
Sbjct: 106 SGKTLEENKEEGASE 120
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,492,276,031
Number of Sequences: 23463169
Number of extensions: 47137763
Number of successful extensions: 263101
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 260191
Number of HSP's gapped (non-prelim): 2861
length of query: 112
length of database: 8,064,228,071
effective HSP length: 80
effective length of query: 32
effective length of database: 6,187,174,551
effective search space: 197989585632
effective search space used: 197989585632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)