Query 036210
Match_columns 211
No_of_seqs 175 out of 1939
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 10:32:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036210.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036210hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 2.5E-52 5.5E-57 359.0 18.0 196 1-203 293-488 (489)
2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.3E-52 7.1E-57 355.4 17.4 197 2-203 302-499 (499)
3 PLN02971 tryptophan N-hydroxyl 100.0 3.8E-51 8.3E-56 359.1 19.4 204 1-208 334-539 (543)
4 PLN03234 cytochrome P450 83B1; 100.0 1.1E-50 2.3E-55 353.2 18.8 201 1-202 295-498 (499)
5 PLN02394 trans-cinnamate 4-mon 100.0 2.4E-50 5.2E-55 351.3 18.8 199 2-203 301-502 (503)
6 PLN02183 ferulate 5-hydroxylas 100.0 3.1E-50 6.6E-55 351.6 18.4 200 2-203 312-512 (516)
7 PTZ00404 cytochrome P450; Prov 100.0 8.7E-50 1.9E-54 346.1 18.9 191 2-202 291-482 (482)
8 KOG0159 Cytochrome P450 CYP11/ 100.0 3.3E-50 7.1E-55 338.1 14.2 195 1-203 323-518 (519)
9 PLN03112 cytochrome P450 famil 100.0 2.7E-49 5.9E-54 345.5 19.9 207 1-208 303-513 (514)
10 KOG0157 Cytochrome P450 CYP4/C 100.0 1.7E-49 3.7E-54 344.9 17.9 195 2-203 299-496 (497)
11 PLN02169 fatty acid (omega-1)- 100.0 1.7E-49 3.6E-54 345.6 17.4 190 2-203 309-500 (500)
12 PLN02966 cytochrome P450 83A1 100.0 3E-49 6.5E-54 344.4 18.9 199 1-199 296-497 (502)
13 PLN00110 flavonoid 3',5'-hydro 100.0 5.5E-49 1.2E-53 342.8 19.3 199 1-203 296-497 (504)
14 PLN02687 flavonoid 3'-monooxyg 100.0 6.9E-49 1.5E-53 343.2 19.8 201 2-203 305-509 (517)
15 PLN00168 Cytochrome P450; Prov 100.0 6.5E-49 1.4E-53 343.5 18.2 199 2-204 314-518 (519)
16 PLN02500 cytochrome P450 90B1 100.0 1.3E-48 2.8E-53 339.5 17.1 171 1-172 286-467 (490)
17 PLN02290 cytokinin trans-hydro 100.0 1.9E-48 4.1E-53 340.4 17.5 191 2-203 324-515 (516)
18 PLN03195 fatty acid omega-hydr 100.0 1.1E-48 2.3E-53 341.9 15.9 194 2-202 300-515 (516)
19 PLN02738 carotene beta-ring hy 100.0 4.4E-48 9.6E-53 343.5 19.0 197 2-205 399-597 (633)
20 PF00067 p450: Cytochrome P450 100.0 1.2E-48 2.6E-53 332.9 13.7 171 2-172 270-440 (463)
21 PLN03018 homomethionine N-hydr 100.0 9.8E-48 2.1E-52 336.6 19.6 203 1-207 321-528 (534)
22 PLN02426 cytochrome P450, fami 100.0 4.9E-48 1.1E-52 336.4 17.5 197 2-203 301-500 (502)
23 PLN02655 ent-kaurene oxidase 100.0 5.6E-48 1.2E-52 333.6 17.3 196 1-203 269-464 (466)
24 PLN02774 brassinosteroid-6-oxi 100.0 4.4E-47 9.6E-52 327.8 17.0 187 2-199 272-461 (463)
25 PLN03141 3-epi-6-deoxocathaste 100.0 9.5E-47 2.1E-51 324.8 17.1 189 1-203 258-450 (452)
26 PLN02936 epsilon-ring hydroxyl 100.0 9.4E-47 2E-51 327.7 16.8 197 1-204 285-483 (489)
27 PLN02196 abscisic acid 8'-hydr 100.0 7.5E-46 1.6E-50 320.1 16.1 186 2-199 272-460 (463)
28 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-45 2.9E-50 320.3 16.7 191 2-204 295-489 (490)
29 PLN02987 Cytochrome P450, fami 100.0 9.6E-45 2.1E-49 313.6 18.2 193 2-204 275-470 (472)
30 KOG0684 Cytochrome P450 [Secon 100.0 2.8E-43 6.1E-48 290.7 14.3 196 2-203 281-485 (486)
31 COG2124 CypX Cytochrome P450 [ 100.0 3.7E-39 8E-44 274.4 13.4 144 2-172 244-387 (411)
32 PLN02648 allene oxide synthase 100.0 1.6E-38 3.4E-43 274.6 14.8 164 5-172 283-462 (480)
33 PF05952 ComX: Bacillus compet 51.8 17 0.00037 22.0 2.4 24 15-38 3-26 (57)
34 PF08492 SRP72: SRP72 RNA-bind 51.2 11 0.00025 22.9 1.6 8 116-123 44-51 (59)
35 PF12508 DUF3714: Protein of u 49.5 17 0.00037 28.1 2.7 44 52-97 51-94 (200)
36 PF09201 SRX: SRX; InterPro: 49.3 14 0.0003 26.7 2.0 22 143-164 19-40 (148)
37 COG1759 5-formaminoimidazole-4 37.0 84 0.0018 26.3 4.9 70 56-158 275-351 (361)
38 PRK06789 flagellar motor switc 36.8 38 0.00082 21.7 2.4 40 59-98 21-62 (74)
39 PF08285 DPM3: Dolichol-phosph 34.4 60 0.0013 21.6 3.2 27 13-39 55-81 (91)
40 KOG3506 40S ribosomal protein 32.2 21 0.00045 21.3 0.6 10 136-145 13-22 (56)
41 PF14129 DUF4296: Domain of un 31.1 1.3E+02 0.0029 19.5 4.5 35 5-39 44-78 (87)
42 PF14483 Cut8_M: Cut8 dimerisa 29.1 94 0.002 17.0 2.8 21 13-33 14-35 (38)
43 PF14550 Peptidase_U35_2: Puta 29.0 37 0.00081 24.0 1.5 21 77-97 72-92 (122)
44 PF07849 DUF1641: Protein of u 28.3 78 0.0017 17.7 2.5 18 15-32 13-30 (42)
45 TIGR03779 Bac_Flav_CT_M Bacter 25.0 63 0.0014 28.0 2.5 21 78-98 278-298 (410)
46 PRK05933 type III secretion sy 21.7 69 0.0015 26.8 2.0 43 56-98 317-362 (372)
47 KOG3302 TATA-box binding prote 21.7 33 0.00071 26.3 0.2 56 113-168 50-116 (200)
48 PF01629 DUF22: Domain of unkn 21.1 72 0.0016 22.2 1.7 35 86-120 61-95 (112)
49 PF14459 Prok-E2_C: Prokaryoti 20.8 37 0.0008 23.5 0.2 16 132-147 105-120 (131)
50 PRK13467 F0F1 ATP synthase sub 20.5 1.8E+02 0.0039 18.1 3.3 25 11-35 20-44 (66)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-52 Score=358.95 Aligned_cols=196 Identities=58% Similarity=1.059 Sum_probs=178.8
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
||++||+|||++++.|++.+|++||++|+|+++||+++++.++.++.+|+.+|||++|+|+|++|++|++|+.++|.+++
T Consensus 293 dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~ 372 (489)
T KOG0156|consen 293 DLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE 372 (489)
T ss_pred HHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC
Confidence 68999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
|+.|+||.|||||.|+++.+++|+||++|+||++|+||||++++ +.+.....++|||.|+|.|||..+|.+++.++++.
T Consensus 373 d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~ 451 (489)
T KOG0156|consen 373 DTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLAN 451 (489)
T ss_pred CeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999974 22335678999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
++++|+|+++.+ .+++... +.++..+.|+.+... +|.
T Consensus 452 llq~F~w~~~~~----~~d~~e~-~~~~~~~~pl~~~~~-~r~ 488 (489)
T KOG0156|consen 452 LLQRFDWKLPGG----KVDMEEA-GLTLKKKKPLKAVPV-PRL 488 (489)
T ss_pred HHheeeeecCCC----CCCCccc-ccceecCCcceeeee-cCC
Confidence 999999998765 3455555 355666778888777 664
No 2
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-52 Score=355.35 Aligned_cols=197 Identities=33% Similarity=0.557 Sum_probs=176.6
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||.||||++|+.++|+||+||++|+||++||++++.+...++++.+.+|+||++||+||||+||+++. ..|.+++|
T Consensus 302 Fl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~-~~R~C~k~ 380 (499)
T KOG0158|consen 302 FLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPF-LNRECTKD 380 (499)
T ss_pred HHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCccc-ccceecCc
Confidence 57899999999999999999999999999999999997765559999999999999999999999999998 78999999
Q ss_pred eeec-CeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 82 CRVA-GYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 82 ~~i~-g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
.+++ ++.||||+.|.++.+++||||++||||++|+||||.+++.+ ...+..|+|||.|||+|+|++||.+|+|+.|++
T Consensus 381 ~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~-~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~ 459 (499)
T KOG0158|consen 381 YEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEENNK-SRHPGAYLPFGVGPRNCIGMRFALMEAKLALAH 459 (499)
T ss_pred eecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCccc-ccCCccccCCCCCccccHHHHHHHHHHHHHHHH
Confidence 9999 99999999999999999999999999999999999987644 446679999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
||++|+++..+. +..+ ......+.++.++.++.+.+. +|.
T Consensus 460 lL~~f~~~~~~~-t~~~-~~~~~~~~~l~pk~gi~Lkl~-~r~ 499 (499)
T KOG0158|consen 460 LLRNFSFEVCPT-TIIP-LEGDPKGFTLSPKGGIWLKLE-PRD 499 (499)
T ss_pred HHhhCEEecCCc-ccCc-ccCCccceeeecCCceEEEEE-eCC
Confidence 999999998773 3222 222223677888889999988 763
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=3.8e-51 Score=359.14 Aligned_cols=204 Identities=41% Similarity=0.785 Sum_probs=180.3
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+|+++||+++++.++.++.+++.+|||++|||+|+||++|+++...+|.+.+
T Consensus 334 ~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~ 413 (543)
T PLN02971 334 ELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALS 413 (543)
T ss_pred HHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCC
Confidence 47899999999999999999999999999999999999988778899999999999999999999999999878899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC--CCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID--VKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
|+.++||.||||+.|+++.+++|||+++|+||++|+||||+++..+ ....++.|+|||.|+|.|+|++||++|+++++
T Consensus 414 d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~l 493 (543)
T PLN02971 414 DTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMML 493 (543)
T ss_pred CeeECCEEECCCCEEEECcHHhcCChhhCCCccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999975432 12345689999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCCCCcc
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLSLHLY 208 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 208 (211)
++|+++|+|+++++.. .+++.+.++ ++..+.++.+.+. +|....+|
T Consensus 494 a~ll~~f~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 539 (543)
T PLN02971 494 ARLLQGFKWKLAGSET--RVELMESSH-DMFLSKPLVMVGE-LRLSEDLY 539 (543)
T ss_pred HHHHHhCEEEeCCCCC--CcchhhhcC-cccccccceeeee-ecCCcccc
Confidence 9999999999876432 455655666 5544558899998 88665565
No 4
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=1.1e-50 Score=353.18 Aligned_cols=201 Identities=48% Similarity=0.930 Sum_probs=178.9
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+++++|+++++++.+.++.+++.+|||++|||+|+||++|+++...+|.+.+
T Consensus 295 ~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~ 374 (499)
T PLN03234 295 DIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIA 374 (499)
T ss_pred HHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccCCcccCC
Confidence 46899999999999999999999999999999999999987777889999999999999999999999999866899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCC--CCCCCcceeccCCCCCCCccHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNID--VKGHDFQLLPFGSGRRICPGYALGLKVIQST 157 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~ 157 (211)
|++++|+.|||||.|.++.+.+||||++| +||++|+||||+++... ....+..|+|||.|+|+|+|+++|++|++++
T Consensus 375 d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 454 (499)
T PLN03234 375 DAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIP 454 (499)
T ss_pred CeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHH
Confidence 99999999999999999999999999999 89999999999975432 2234568999999999999999999999999
Q ss_pred HHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCc
Q 036210 158 LANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPR 202 (211)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (211)
++.|+++|+|+++++.....+.....+++...++.++.+.++ +|
T Consensus 455 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 498 (499)
T PLN03234 455 FANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPT-KH 498 (499)
T ss_pred HHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEee-cC
Confidence 999999999999875333344555567888788888888888 65
No 5
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00 E-value=2.4e-50 Score=351.28 Aligned_cols=199 Identities=38% Similarity=0.775 Sum_probs=173.4
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++|+|++||++|++|++||+++++.+..++.+++.+|||++|||+|+||++|+++...+|.+.+|
T Consensus 301 ~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d 380 (503)
T PLN02394 301 INVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLED 380 (503)
T ss_pred HHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCC
Confidence 56899999999999999999999999999999999999876667888999999999999999999999999778999999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC--CCCCCcceeccCCCCCCCccHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID--VKGHDFQLLPFGSGRRICPGYALGLKVIQSTLA 159 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~ 159 (211)
+.++|+.||+||.|.++.+++|||+++|+||++|+||||+++++. .......|+|||.|+|+|+|++||++|++++++
T Consensus 381 ~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la 460 (503)
T PLN02394 381 AKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLG 460 (503)
T ss_pred cccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975432 122356899999999999999999999999999
Q ss_pred HHHhhCeeeccCCCCCCCCCcccccc-eeeccCCCeEEEecCCcC
Q 036210 160 NLLYGFEWKLPGDMKNEDLDMEDRFG-LTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~ 203 (211)
+++++|+|++.++.+ .++....++ +....+.++.+.+. ||.
T Consensus 461 ~ll~~f~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~r~ 502 (503)
T PLN02394 461 RLVQNFELLPPPGQS--KIDVSEKGGQFSLHIAKHSTVVFK-PRS 502 (503)
T ss_pred HHHHHceeEeCCCCC--cCccccccCceeeccCCCceEEee-cCC
Confidence 999999999866531 234444453 44434448888888 875
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=3.1e-50 Score=351.64 Aligned_cols=200 Identities=49% Similarity=0.914 Sum_probs=173.9
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++++|++||++|+|+++|++++++.++.++.+++.+|||++|||+|+||++|+++.. .|.+.+|
T Consensus 312 ~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~-~r~~~~d 390 (516)
T PLN02183 312 VMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL-LHETAED 390 (516)
T ss_pred HHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce-eeeccCc
Confidence 678999999999999999999999999999999999998666678999999999999999999999999984 5899999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC-CCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID-VKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
++++|+.|||||.|.++.+++|||+++|+||++|+||||++++.. .....+.|+|||.|+|+|+|++||++|+++++++
T Consensus 391 ~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ 470 (516)
T PLN02183 391 AEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAH 470 (516)
T ss_pred eeECCEEECCCCEEEEehhhhcCCccccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975431 1234568999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
|+++|++++.++......+....++.+.....++.+.++ +|.
T Consensus 471 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~ 512 (516)
T PLN02183 471 LLHCFTWELPDGMKPSELDMNDVFGLTAPRATRLVAVPT-YRL 512 (516)
T ss_pred HHheeEEEcCCCCCCCCCChhhccccccccCCCcEEEee-cCC
Confidence 999999998765322224444455655545568888888 873
No 7
>PTZ00404 cytochrome P450; Provisional
Probab=100.00 E-value=8.7e-50 Score=346.14 Aligned_cols=191 Identities=30% Similarity=0.565 Sum_probs=169.1
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++++|++||++|+||++|++++++++..++.+++.+|||++|||+|+||++|+++...+|.+.+|
T Consensus 291 ~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d 370 (482)
T PTZ00404 291 FFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGLPRSTSND 370 (482)
T ss_pred HHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcCCCCCCccccccChHHHHHHHHHHHhcCCcccccceeccCC
Confidence 67899999999999999999999999999999999999876667899999999999999999999999997678999999
Q ss_pred eee-cCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 82 CRV-AGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 82 ~~i-~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
+++ +|+.||+|+.|.++.+++||||++|+||++|+||||+++. .+..|+|||.|+|.|+|++||++|+++++++
T Consensus 371 ~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ 445 (482)
T PTZ00404 371 IIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSN 445 (482)
T ss_pred EEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999998642 3458999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCc
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPR 202 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (211)
++++|+|+++++. +.+.....++++.+ .++.+.++ +|
T Consensus 446 ll~~f~~~~~~~~---~~~~~~~~~~~~~~-~~~~v~~~-~R 482 (482)
T PTZ00404 446 IILNFKLKSIDGK---KIDETEEYGLTLKP-NKFKVLLE-KR 482 (482)
T ss_pred HHHhcEEecCCCC---CCCcccccceeecC-CCceeeee-cC
Confidence 9999999986542 22222234555554 46788877 65
No 8
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-50 Score=338.10 Aligned_cols=195 Identities=34% Similarity=0.580 Sum_probs=179.8
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGK-DRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVAR 79 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~ 79 (211)
||++||.|||++++.|++|+|++||++|++|++|+.+++.. +..++.+++.+||||+|||||++||+|.++. ..|+..
T Consensus 323 dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~-~~R~l~ 401 (519)
T KOG0159|consen 323 DLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPG-NGRVLP 401 (519)
T ss_pred HHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceeccccc-cccccc
Confidence 68899999999999999999999999999999999999987 5778889999999999999999999999998 679999
Q ss_pred CCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHH
Q 036210 80 DDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLA 159 (211)
Q Consensus 80 ~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~ 159 (211)
+|.+++||.|||||.|.++.+.+.+||++|++|++|+||||++++. .+.+++.++|||.|+|+|+||+||.+||.+.++
T Consensus 402 ~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLa 480 (519)
T KOG0159|consen 402 KDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLA 480 (519)
T ss_pred hhceeccceecCCCeEEEeehhhccChhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998763 345778999999999999999999999999999
Q ss_pred HHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 160 NLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+++++|+++...+. ++...+.+++.|..++.+.++ +|.
T Consensus 481 rllr~f~V~~~~~~-----pv~~~~~~il~P~~~l~f~f~-~r~ 518 (519)
T KOG0159|consen 481 RLLRNFKVEFLHEE-----PVEYVYRFILVPNRPLRFKFR-PRN 518 (519)
T ss_pred HHHHhcceeecCCC-----CccceeEEEEcCCCCcceeee-eCC
Confidence 99999999986642 456667788889999999998 775
No 9
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=2.7e-49 Score=345.52 Aligned_cols=207 Identities=42% Similarity=0.864 Sum_probs=180.8
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+++++||++++++++.++.+++.+|||++|||+|++|++|+++..++|.+.+
T Consensus 303 ~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~ 382 (514)
T PLN03112 303 DMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLR 382 (514)
T ss_pred HHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCcccccccccCC
Confidence 36899999999999999999999999999999999999987777899999999999999999999999999867899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC---C-CCCCcceeccCCCCCCCccHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID---V-KGHDFQLLPFGSGRRICPGYALGLKVIQS 156 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~---~-~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~ 156 (211)
|++++|+.|||||.|.++.+++|+||++|+||++|+||||+.+... . ....+.|+|||.|+|+|+|++||++|+++
T Consensus 383 d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~ 462 (514)
T PLN03112 383 ATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLM 462 (514)
T ss_pred CeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998754211 1 12245799999999999999999999999
Q ss_pred HHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCCCCcc
Q 036210 157 TLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLSLHLY 208 (211)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 208 (211)
++++++++|+|++.++...++......+++.+++..++.+.+. ||...+.|
T Consensus 463 ~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ 513 (514)
T PLN03112 463 ALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVAT-PRLAPHLY 513 (514)
T ss_pred HHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEee-cCCccccc
Confidence 9999999999998755322334444556677667778999999 99766654
No 10
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-49 Score=344.87 Aligned_cols=195 Identities=34% Similarity=0.621 Sum_probs=172.7
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC-CCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRW-VEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
|++||+|||+++++|++++|+.||++|+++++|+.++++++.. .+.....+|+|+++||+|||||+|++|. ..|.+.+
T Consensus 299 f~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~-~~R~~~~ 377 (497)
T KOG0157|consen 299 FMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPL-VARKATK 377 (497)
T ss_pred heeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCch-hhcccCC
Confidence 7899999999999999999999999999999999999975432 2333333699999999999999999998 6799999
Q ss_pred Ceeec-CeeecCCCEEecchHHhcCCCCCCC-CCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 81 DCRVA-GYDILRNTRVVVNVWAIGRDPTMWE-KPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 81 d~~i~-g~~ip~gt~v~~~~~~~~~d~~~~~-~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
|+.++ |+.||||+.|.++.+++|||+++|+ ||++||||||+++......+++.|+|||+|+|+|+|++||++||++++
T Consensus 378 d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l 457 (497)
T KOG0157|consen 378 DVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVL 457 (497)
T ss_pred CeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHH
Confidence 99995 8999999999999999999999996 999999999997643335567899999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
++++++|+|++..+.. ......+++.++.++.+.++ +|.
T Consensus 458 ~~ll~~f~~~~~~~~~-----~~~~~~~~l~~~~gl~v~~~-~r~ 496 (497)
T KOG0157|consen 458 AHLLRRFRIEPVGGDK-----PKPVPELTLRPKNGLKVKLR-PRG 496 (497)
T ss_pred HHHHHheEEEecCCCC-----ceeeeEEEEEecCCeEEEEE-eCC
Confidence 9999999999876631 45567888899999999999 775
No 11
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00 E-value=1.7e-49 Score=345.63 Aligned_cols=190 Identities=25% Similarity=0.504 Sum_probs=164.0
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++|+|++||++|+|+++||++++ +.+++.+|||++|||+|+||++|+++...++.+.+|
T Consensus 309 ~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~ 382 (500)
T PLN02169 309 LVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPD 382 (500)
T ss_pred HHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCC
Confidence 67899999999999999999999999999999999864 568899999999999999999999998654444455
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCCCC-CCCcceeccCCCCCCCccHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNIDVK-GHDFQLLPFGSGRRICPGYALGLKVIQSTLA 159 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~ 159 (211)
+.++|+.||||+.|.++.+++|||+++| +||++|+||||+++++... ..++.|+|||+|+|+|+|++||++|++++++
T Consensus 383 ~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la 462 (500)
T PLN02169 383 VLPSGHKVDAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVAL 462 (500)
T ss_pred CccCCEEECCCCEEEEcHHHhhCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 5569999999999999999999999999 8999999999997643322 2357899999999999999999999999999
Q ss_pred HHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 160 NLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+|+++|+|++.++. +.....++++.++.++.++++ +|.
T Consensus 463 ~ll~~f~~~~~~~~-----~~~~~~~~~l~~~~gl~l~l~-~~~ 500 (500)
T PLN02169 463 EIIKNYDFKVIEGH-----KIEAIPSILLRMKHGLKVTVT-KKI 500 (500)
T ss_pred HHHHHCEEEEcCCC-----CcccccceEEecCCCEEEEEE-eCC
Confidence 99999999986542 223344567788889999988 763
No 12
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=3e-49 Score=344.36 Aligned_cols=199 Identities=47% Similarity=0.911 Sum_probs=170.4
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC--CCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceec
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKD--RWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVA 78 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~ 78 (211)
++++||+|||+++++|++|+|++||++|+|+++|++++++.+ ..++.+++.+|||++|||+|+||++|+++...+|.+
T Consensus 296 ~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~ 375 (502)
T PLN02966 296 DIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRAC 375 (502)
T ss_pred HHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCcccccCccc
Confidence 468999999999999999999999999999999999998743 346889999999999999999999999998678999
Q ss_pred CCCeeecCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHH
Q 036210 79 RDDCRVAGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQST 157 (211)
Q Consensus 79 ~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~ 157 (211)
.+|+.++|+.||+||.|.++.+++||||++| +||++|+||||++++......+..|+|||.|+|+|+|++||++|++++
T Consensus 376 ~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~ 455 (502)
T PLN02966 376 IQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVP 455 (502)
T ss_pred CCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999754322234568999999999999999999999999
Q ss_pred HHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEec
Q 036210 158 LANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPS 199 (211)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (211)
++.|+++|+|++.++.....++.....++...++.++.+..+
T Consensus 456 la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (502)
T PLN02966 456 YANLLLNFNFKLPNGMKPDDINMDVMTGLAMHKSQHLKLVPE 497 (502)
T ss_pred HHHHHHhceeeCCCCCCcccCCcccccCeeeccCCCeEEEEE
Confidence 999999999998765322234444555665544445554444
No 13
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=5.5e-49 Score=342.76 Aligned_cols=199 Identities=49% Similarity=1.017 Sum_probs=176.4
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+|+++|++++++++..++.+++.+|||+++||+|+||++|+++..++|.+.+
T Consensus 296 ~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 375 (504)
T PLN00110 296 NLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQ 375 (504)
T ss_pred hhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCcccccccccCC
Confidence 46899999999999999999999999999999999999987777889999999999999999999999999877899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCC---CCCCcceeccCCCCCCCccHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDV---KGHDFQLLPFGSGRRICPGYALGLKVIQST 157 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~---~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~ 157 (211)
|++++|+.||+|+.|.++.+++|+|+++|+||++|+||||++++... ....+.|+|||.|+|.|+|++||++|++++
T Consensus 376 d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~ 455 (504)
T PLN00110 376 ACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYI 455 (504)
T ss_pred CeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999653211 112357999999999999999999999999
Q ss_pred HHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 158 LANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+++|+++|+|++.++. +.+.....++++.++.++.+.++ +|.
T Consensus 456 la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~r~ 497 (504)
T PLN00110 456 LGTLVHSFDWKLPDGV---ELNMDEAFGLALQKAVPLSAMVT-PRL 497 (504)
T ss_pred HHHHHHhceeecCCCC---ccCcccccccccccCCCceEeec-cCC
Confidence 9999999999986652 23333445677778889999998 873
No 14
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=6.9e-49 Score=343.17 Aligned_cols=201 Identities=50% Similarity=0.995 Sum_probs=176.9
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++++|++||++|+++++|++++++.++.++.+++.+|||++|||+|+||++|+++..++|.+.+|
T Consensus 305 ~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d 384 (517)
T PLN02687 305 LFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEE 384 (517)
T ss_pred HhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCC
Confidence 67899999999999999999999999999999999998877778899999999999999999999999998778999999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC----CCCCCcceeccCCCCCCCccHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID----VKGHDFQLLPFGSGRRICPGYALGLKVIQST 157 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~ 157 (211)
++++|+.||+|+.|.++.+++|+|+++|+||++|+||||++++.. ....++.|+|||.|+|.|+|++||++|++++
T Consensus 385 ~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~ 464 (517)
T PLN02687 385 CEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLL 464 (517)
T ss_pred eeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999999999975321 1223457999999999999999999999999
Q ss_pred HHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 158 LANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+++|+++|+|++.++....+.+....+++.+.+..++.+.++ +|.
T Consensus 465 la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~R~ 509 (517)
T PLN02687 465 TATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPR-PRL 509 (517)
T ss_pred HHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeec-cCC
Confidence 999999999998765322233334455666667778999999 884
No 15
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=6.5e-49 Score=343.48 Aligned_cols=199 Identities=36% Similarity=0.659 Sum_probs=172.3
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKD-RWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
+++||+|||+++++|++++|++||++|+|+++||+++++.+ +.++.+++.+|||++|||+|++|++|+++..++|.+.+
T Consensus 314 l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~ 393 (519)
T PLN00168 314 FLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAE 393 (519)
T ss_pred HHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCC
Confidence 67899999999999999999999999999999999998753 56788999999999999999999999998877899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC-----CCCCCcceeccCCCCCCCccHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID-----VKGHDFQLLPFGSGRRICPGYALGLKVIQ 155 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~ 155 (211)
|++++|+.||||+.|.++.+++||||++|+||++|+||||++++.. ....++.|+|||.|+|+|+|++||++|++
T Consensus 394 d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~ 473 (519)
T PLN00168 394 DMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLE 473 (519)
T ss_pred CccCCCEEECCCCEEEEChHHHhcCccccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999974311 11234579999999999999999999999
Q ss_pred HHHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCC
Q 036210 156 STLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLS 204 (211)
Q Consensus 156 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (211)
+++++|+++|+|++.++. ..+.....+++..++.++.+.++ +|.+
T Consensus 474 ~~la~ll~~f~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~R~~ 518 (519)
T PLN00168 474 YFVANMVREFEWKEVPGD---EVDFAEKREFTTVMAKPLRARLV-PRRT 518 (519)
T ss_pred HHHHHHHHHccceeCCCC---cCChhhhceeEEeecCCcEEEEE-eccC
Confidence 999999999999986642 22332233445555667888888 7754
No 16
>PLN02500 cytochrome P450 90B1
Probab=100.00 E-value=1.3e-48 Score=339.51 Aligned_cols=171 Identities=28% Similarity=0.487 Sum_probs=155.3
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-----CCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCc
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIG-----KDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLP 75 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~-----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~ 75 (211)
++++||+|||+++++|++++|++||++|+|+++|++++++ .+..++.+++.+|||++|||+|+||++|+++. .+
T Consensus 286 ~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~-~~ 364 (490)
T PLN02500 286 SLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRF-LH 364 (490)
T ss_pred HHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccC-ee
Confidence 3689999999999999999999999999999999999864 23357889999999999999999999999998 57
Q ss_pred eecCCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCC------CCCcceeccCCCCCCCccHHH
Q 036210 76 RVARDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVK------GHDFQLLPFGSGRRICPGYAL 149 (211)
Q Consensus 76 r~~~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~l 149 (211)
|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++++.... ..++.|+|||.|+|.|+|++|
T Consensus 365 R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~ 444 (490)
T PLN02500 365 RKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSEL 444 (490)
T ss_pred eEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHH
Confidence 99999999999999999999999999999999999999999999997542211 235689999999999999999
Q ss_pred HHHHHHHHHHHHHhhCeeeccCC
Q 036210 150 GLKVIQSTLANLLYGFEWKLPGD 172 (211)
Q Consensus 150 A~~e~~~~l~~ll~~f~~~~~~~ 172 (211)
|++|+++++++|+++|+|++.++
T Consensus 445 A~~el~~~la~ll~~f~~~~~~~ 467 (490)
T PLN02500 445 AKLEMAVFIHHLVLNFNWELAEA 467 (490)
T ss_pred HHHHHHHHHHHHHhccEEEEcCC
Confidence 99999999999999999998665
No 17
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=1.9e-48 Score=340.36 Aligned_cols=191 Identities=27% Similarity=0.479 Sum_probs=169.3
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++++|++||++|+|+++|++++++++ .++.+++.+|||++|||+|+||++|+++. .+|.+.+|
T Consensus 324 ~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~-~~R~~~~d 401 (516)
T PLN02290 324 FFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATL-LPRMAFED 401 (516)
T ss_pred HHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCccc-cceeecCC
Confidence 67899999999999999999999999999999999998865 67899999999999999999999999986 78999999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
++++|+.||+||.|.++.+++||||++| +||++|+||||++++. .....|+|||.|+|.|+|++||++|++++++.
T Consensus 402 ~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ 478 (516)
T PLN02290 402 IKLGDLHIPKGLSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAM 478 (516)
T ss_pred eeECCEEECCCCEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 8999999999995421 12347999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
|+++|++++.++.. ......++..|..++.++++ +|.
T Consensus 479 ll~~f~~~~~~~~~-----~~~~~~~~~~p~~~~~~~~~-~~~ 515 (516)
T PLN02290 479 LISKFSFTISDNYR-----HAPVVVLTIKPKYGVQVCLK-PLN 515 (516)
T ss_pred HHHhceEeeCCCcc-----cCccceeeecCCCCCeEEEE-eCC
Confidence 99999999866421 11122466778888888888 764
No 18
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00 E-value=1.1e-48 Score=341.92 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=163.5
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--------------------CCCCCcccCCCChhHHHHHH
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGK--------------------DRWVEEKDIVNLPYIEAIVK 61 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~--------------------~~~~~~~~~~~l~~l~a~i~ 61 (211)
+++||+|||+++++|++|+|++||++|+||++|++++.++ ++.++.+++.+|||++|||+
T Consensus 300 ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~ 379 (516)
T PLN03195 300 FVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVIT 379 (516)
T ss_pred HHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHH
Confidence 6789999999999999999999999999999999987643 23467889999999999999
Q ss_pred HHhcCCCCCCCCCceecCCCee-ecCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCCCCCCCcceeccCC
Q 036210 62 ETMRLHPVAPLLLPRVARDDCR-VAGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNIDVKGHDFQLLPFGS 139 (211)
Q Consensus 62 E~lRl~p~~~~~~~r~~~~d~~-i~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~ 139 (211)
|+||++|+++... |.+.+|.. ++|+.||||+.|.++.+++||||++| +||++|+||||++++......++.|+|||.
T Consensus 380 EtLRl~p~~p~~~-r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~ 458 (516)
T PLN03195 380 ETLRLYPAVPQDP-KGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQA 458 (516)
T ss_pred HHhhcCCCCcchh-hhhccCcCcCCCcEECCCCEEEEehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCC
Confidence 9999999999854 54555544 59999999999999999999999999 999999999999643211234567999999
Q ss_pred CCCCCccHHHHHHHHHHHHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCc
Q 036210 140 GRRICPGYALGLKVIQSTLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPR 202 (211)
Q Consensus 140 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (211)
|+|+|+|++||++|++++++.++++|++++.++. + .......+..++.++.+.++ +|
T Consensus 459 G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~---~--~~~~~~~~~~~~~~~~v~~~-~r 515 (516)
T PLN03195 459 GPRICLGKDSAYLQMKMALALLCRFFKFQLVPGH---P--VKYRMMTILSMANGLKVTVS-RR 515 (516)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCC---c--ceeeeeeEEecCCCEEEEEE-eC
Confidence 9999999999999999999999999999986542 2 22233345567778888888 66
No 19
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00 E-value=4.4e-48 Score=343.46 Aligned_cols=197 Identities=28% Similarity=0.532 Sum_probs=171.3
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++++|++||++|+||++|+++++++ ..++.+++.+||||+|||+|+||++|+++. ..|.+.+|
T Consensus 399 ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~~-~~~t~edL~kLPYL~AVIkEtLRL~p~~p~-~~R~a~~d 476 (633)
T PLN02738 399 MLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGD-RFPTIEDMKKLKYTTRVINESLRLYPQPPV-LIRRSLEN 476 (633)
T ss_pred HHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC-CCCCHHHHccCHHHHHHHHHHHhcCCCccc-cceeeccC
Confidence 6789999999999999999999999999999999999874 567899999999999999999999999998 55888999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCC--CCCCCCcceeccCCCCCCCccHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNI--DVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLA 159 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~ 159 (211)
.+++|+.||+||.|.++.+.+||||++|+||++|+||||+.+.. .....+..|+|||.|+|+|+|++||++|++++++
T Consensus 477 ~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA 556 (633)
T PLN02738 477 DMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATA 556 (633)
T ss_pred ceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999985321 1123456799999999999999999999999999
Q ss_pred HHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCCC
Q 036210 160 NLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLSL 205 (211)
Q Consensus 160 ~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (211)
.|+++|+|++..+.. + +....+.+..+..++.++++ +|...
T Consensus 557 ~Llr~F~~el~~~~~--~--~~~~~~~~~~p~~~l~v~l~-~R~~~ 597 (633)
T PLN02738 557 MLVRRFDFQLAPGAP--P--VKMTTGATIHTTEGLKMTVT-RRTKP 597 (633)
T ss_pred HHHHhCeeEeCCCCC--C--cccccceEEeeCCCcEEEEE-ECCCC
Confidence 999999999876531 2 22233456666778888888 77553
No 20
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00 E-value=1.2e-48 Score=332.94 Aligned_cols=171 Identities=43% Similarity=0.783 Sum_probs=157.1
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+.+++|++++|++||++|++|++|++++.++.+.++.+++.+||||+|||+|++|++|+++..++|.+.+|
T Consensus 270 ~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d 349 (463)
T PF00067_consen 270 LLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSLPRVATED 349 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999776778899999999999999999999999996688999999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLANL 161 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l 161 (211)
++++|+.||||+.|.++.+++|+|+++|+||++|+|+||++.+.........|+|||.|+|.|+|++||++|++++++.|
T Consensus 350 ~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~l 429 (463)
T PF00067_consen 350 VTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKL 429 (463)
T ss_dssp EEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998875223455689999999999999999999999999999
Q ss_pred HhhCeeeccCC
Q 036210 162 LYGFEWKLPGD 172 (211)
Q Consensus 162 l~~f~~~~~~~ 172 (211)
|++|+|++.++
T Consensus 430 l~~f~~~~~~~ 440 (463)
T PF00067_consen 430 LRRFDFELVPG 440 (463)
T ss_dssp HHHEEEEESTT
T ss_pred HHhCEEEECCC
Confidence 99999999665
No 21
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=9.8e-48 Score=336.56 Aligned_cols=203 Identities=37% Similarity=0.678 Sum_probs=174.4
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+++++||+++++.++.++.+++.+|||++|||+|+||++|+++...+|.+.+
T Consensus 321 ~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~ 400 (534)
T PLN03018 321 EFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQ 400 (534)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCC
Confidence 36789999999999999999999999999999999999987777888999999999999999999999999866899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCC-----CCCCcceeccCCCCCCCccHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDV-----KGHDFQLLPFGSGRRICPGYALGLKVIQ 155 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~lA~~e~~ 155 (211)
|+.++|+.||||+.|.++.+++|+||++|+||++|+||||++.++.. ...+..|+|||.|+|.|+|++||.+|++
T Consensus 401 d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~ 480 (534)
T PLN03018 401 DTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMV 480 (534)
T ss_pred CeeECCEEECCCCEEEEChHHhcCCcccCCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 1234679999999999999999999999
Q ss_pred HHHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCCCCc
Q 036210 156 STLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLSLHL 207 (211)
Q Consensus 156 ~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 207 (211)
+++++|+++|+|++.++. .+++.....+.+.. +.++.+.++ +|....+
T Consensus 481 ~~la~ll~~f~~~~~~~~--~~~~~~~~~~~~~~-p~~~~v~~~-~R~~~~~ 528 (534)
T PLN03018 481 MMLARFLQGFNWKLHQDF--GPLSLEEDDASLLM-AKPLLLSVE-PRLAPNL 528 (534)
T ss_pred HHHHHHHHhceEEeCCCC--CCCCccccccceec-CCCeEEEEE-ecccccc
Confidence 999999999999986542 12333333344444 458999999 8853333
No 22
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00 E-value=4.9e-48 Score=336.39 Aligned_cols=197 Identities=27% Similarity=0.420 Sum_probs=169.3
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKD-RWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
+++||+|||+++++|++|+|++||++|+||++|++++.+++ ..++.+++.+|||++|||+|+||++|+++.. .|.+.+
T Consensus 301 ~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~-~r~~~~ 379 (502)
T PLN02426 301 FLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAALYESMRLFPPVQFD-SKFAAE 379 (502)
T ss_pred HHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCCCCCCHHHHhcChHHHHHHHHHHhCCCCCCCc-ceeecc
Confidence 67899999999999999999999999999999999988753 3578999999999999999999999999985 588888
Q ss_pred Ceee-cCeeecCCCEEecchHHhcCCCCCC-CCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 81 DCRV-AGYDILRNTRVVVNVWAIGRDPTMW-EKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 81 d~~i-~g~~ip~gt~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
|..+ +|+.||+||.|.++.+++|||+++| +||++|+||||+++.......++.++|||.|+|.|+|+++|++|+++++
T Consensus 380 d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~l 459 (502)
T PLN02426 380 DDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVA 459 (502)
T ss_pred CCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHH
Confidence 8776 8999999999999999999999999 9999999999997431112345679999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+.++++|++++..+.. + ......++++.++.++.++++ +|.
T Consensus 460 a~ll~~f~~~~~~~~~--~-~~~~~~~~~~~~~~gl~v~~~-~r~ 500 (502)
T PLN02426 460 VAVVRRFDIEVVGRSN--R-APRFAPGLTATVRGGLPVRVR-ERV 500 (502)
T ss_pred HHHHHHceEEEecCCC--C-CCcccceeEEecCCCEEEEEE-Ecc
Confidence 9999999999864321 1 122234567788888999998 663
No 23
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=5.6e-48 Score=333.64 Aligned_cols=196 Identities=34% Similarity=0.671 Sum_probs=173.6
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++++|++||++|+++++||+++++.+. ++.+++.++||+++|++|+||++|+++...+|.+.+
T Consensus 269 ~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~ 347 (466)
T PLN02655 269 EPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHE 347 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCC
Confidence 3678999999999999999999999999999999999988654 889999999999999999999999999877899999
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLAN 160 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~ 160 (211)
|++++|+.||||+.|+++.+++|||+++|+||++|+||||++.+... ...+.++|||.|+|.|+|++||..|+++++++
T Consensus 348 d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ 426 (466)
T PLN02655 348 DTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIAR 426 (466)
T ss_pred CcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999754321 22367999999999999999999999999999
Q ss_pred HHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 161 LLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 161 ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
||++|+|++.++.. +.....+++..++.++.+.++ +|.
T Consensus 427 ll~~f~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~r~ 464 (466)
T PLN02655 427 LVQEFEWRLREGDE----EKEDTVQLTTQKLHPLHAHLK-PRG 464 (466)
T ss_pred HHHHeEEEeCCCCc----cccchhheeEeecCCcEEEEe-ecC
Confidence 99999999866521 123345666777778999888 765
No 24
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00 E-value=4.4e-47 Score=327.78 Aligned_cols=187 Identities=26% Similarity=0.436 Sum_probs=161.9
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---CCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceec
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGK---DRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVA 78 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~ 78 (211)
+++||+|||+++++|++++|++||++|+++++|++++++. +..++.+++.++||++|||+|+||++|+++. ..|.+
T Consensus 272 ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~-~~R~~ 350 (463)
T PLN02774 272 ILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNG-VLRKT 350 (463)
T ss_pred HHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCC-ccccc
Confidence 6789999999999999999999999999999999999753 3457889999999999999999999999986 66999
Q ss_pred CCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 79 RDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 79 ~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
.+|++++|+.||||+.|+++.+.+|+|+++|+||++|+||||++++. . ....|+|||+|+|.|+|++||.+|+++++
T Consensus 351 ~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~--~-~~~~~lpFG~G~r~C~G~~~A~~e~~~~l 427 (463)
T PLN02774 351 TQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSL--E-SHNYFFLFGGGTRLCPGKELGIVEISTFL 427 (463)
T ss_pred CCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCc--C-CCccccCcCCCCCcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999996542 1 12369999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEec
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPS 199 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (211)
+.|+++|+|++.++.. . .. .. ...++.++.++++
T Consensus 428 a~Ll~~f~~~~~~~~~--~---~~-~~-~~~p~~g~~~~~~ 461 (463)
T PLN02774 428 HYFVTRYRWEEVGGDK--L---MK-FP-RVEAPNGLHIRVS 461 (463)
T ss_pred HHHHHhceEEECCCCc--c---cc-CC-CCCCCCCceEEee
Confidence 9999999999876521 1 11 11 2235566777665
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00 E-value=9.5e-47 Score=324.84 Aligned_cols=189 Identities=25% Similarity=0.392 Sum_probs=166.3
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC----CCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCce
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIG----KDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPR 76 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~----~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r 76 (211)
++++||+|||+++++|++++|++||++|+++++|+.++.+ .+..++.+++.+|||++|||+|+||++|+++. .+|
T Consensus 258 ~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~-~~R 336 (452)
T PLN03141 258 DMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIING-VMR 336 (452)
T ss_pred HHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCC-cce
Confidence 4678999999999999999999999999999999988763 23346788899999999999999999999875 679
Q ss_pred ecCCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHH
Q 036210 77 VARDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQS 156 (211)
Q Consensus 77 ~~~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~ 156 (211)
.+.+|++++||.||||+.|.++.+++|+|+++|+||++|+||||++++. .+..|+|||.|+|.|+|++||.+|+++
T Consensus 337 ~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~ 412 (452)
T PLN03141 337 KAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASI 412 (452)
T ss_pred eecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997532 345799999999999999999999999
Q ss_pred HHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 157 TLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 157 ~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
+++.|+++|+|+++++. . . ...++.+..++.+.++ +|.
T Consensus 413 ~la~ll~~f~~~~~~~~---~--~---~~~~~~~~~~~~~~~~-~~~ 450 (452)
T PLN03141 413 FLHHLVTRFRWVAEEDT---I--V---NFPTVRMKRKLPIWVT-RID 450 (452)
T ss_pred HHHHHHhcCeeecCCCC---e--e---ecccccCCCCceEEEE-eCC
Confidence 99999999999976542 1 1 1235677778889988 774
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=100.00 E-value=9.4e-47 Score=327.72 Aligned_cols=197 Identities=34% Similarity=0.549 Sum_probs=169.8
Q ss_pred CceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 1 DLLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 1 ~l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
++++||+|||+++++|++|+|++||++|+++++|++++++. ...+.+++.+|||++|||+|++|++|+++...+|.+.+
T Consensus 285 ~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~ 363 (489)
T PLN02936 285 SMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVE 363 (489)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccC
Confidence 36789999999999999999999999999999999999875 34688889999999999999999999998878788888
Q ss_pred CeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCC--CCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 81 DCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNID--VKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 81 d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
|+.++|+.||+|+.|+++.+++|+|+++|+||++|+||||+.++.. ....+..|+|||.|+|.|+|++||++|+++++
T Consensus 364 ~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~l 443 (489)
T PLN02936 364 DVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVAL 443 (489)
T ss_pred ccccCCeEECCCCEEEecHHhccCChhhCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999999999965421 12234579999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCC
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLS 204 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (211)
++|+++|+++++++. ... ...+.+..++.++.++++ +|..
T Consensus 444 a~ll~~f~~~~~~~~---~~~--~~~~~~~~~~~~~~v~~~-~R~~ 483 (489)
T PLN02936 444 AVLLQRLDLELVPDQ---DIV--MTTGATIHTTNGLYMTVS-RRRV 483 (489)
T ss_pred HHHHHhCeEEecCCC---ccc--eecceEEeeCCCeEEEEE-eeeC
Confidence 999999999987542 122 223455556668888888 7754
No 27
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00 E-value=7.5e-46 Score=320.13 Aligned_cols=186 Identities=24% Similarity=0.428 Sum_probs=163.1
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC---CCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceec
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGK---DRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVA 78 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~ 78 (211)
+++||+|||+++++|++++|++||++|+++++|++++.+. +..++.+++.++||++|+|+|++|++|+++.. .|.+
T Consensus 272 ~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~-~R~~ 350 (463)
T PLN02196 272 VIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT-FREA 350 (463)
T ss_pred HHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc-ceee
Confidence 6789999999999999999999999999999999998763 34578889999999999999999999999884 5999
Q ss_pred CCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 79 RDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 79 ~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
.+|+.++|+.||||+.|.++.+++|+|+++|+||++|+||||++.. .+..++|||.|+|.|+|+++|++|+++++
T Consensus 351 ~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~l 425 (463)
T PLN02196 351 VEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLI 425 (463)
T ss_pred ccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999632 34579999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEec
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPS 199 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (211)
+.|+++|+|++.++. .+. .+..+..|+..+.++++
T Consensus 426 a~ll~~f~~~~~~~~----~~~--~~~~~~~p~~~~~~~~~ 460 (463)
T PLN02196 426 HHLTTKYRWSIVGTS----NGI--QYGPFALPQNGLPIALS 460 (463)
T ss_pred HHHHHhcEEEEcCCC----Cce--EEcccccCCCCceEEEe
Confidence 999999999986542 122 23333456667777765
No 28
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00 E-value=1.3e-45 Score=320.32 Aligned_cols=191 Identities=27% Similarity=0.430 Sum_probs=166.1
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCC----CCCCcccCCCChhHHHHHHHHhcCCCCCCCCCcee
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKD----RWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRV 77 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~----~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~ 77 (211)
+++||+|||+++++|++++|++||++|+|+++|++++++.. ..++.+++.++||++|+|+|++|++|+++. .+|.
T Consensus 295 ~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~-~~R~ 373 (490)
T PLN02302 295 YLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLT-VFRE 373 (490)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCccc-chhc
Confidence 67899999999999999999999999999999999987642 126788999999999999999999999987 5688
Q ss_pred cCCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHH
Q 036210 78 ARDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQST 157 (211)
Q Consensus 78 ~~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~ 157 (211)
+.+|++++|+.||||+.|.++.+++|+|+++|+||++|+||||++.. ..+..++|||.|+|.|+|++||.+|++++
T Consensus 374 ~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~----~~~~~~~pFG~G~r~C~G~~lA~~e~~~~ 449 (490)
T PLN02302 374 AKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYT----PKAGTFLPFGLGSRLCPGNDLAKLEISIF 449 (490)
T ss_pred ccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCC----CCCCCccCCCCCCcCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999643 23457999999999999999999999999
Q ss_pred HHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCC
Q 036210 158 LANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLS 204 (211)
Q Consensus 158 l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (211)
++.++++|+|++.++. .++. ......|..++.++++ +|.+
T Consensus 450 la~ll~~f~~~~~~~~----~~~~--~~~~~~p~~~~~~~~~-~~~~ 489 (490)
T PLN02302 450 LHHFLLGYRLERLNPG----CKVM--YLPHPRPKDNCLARIT-KVAS 489 (490)
T ss_pred HHHHHhcCeeEEcCCC----Ccce--eCCCCCCCCCceEEEE-eccC
Confidence 9999999999986542 1222 2223566778888888 6654
No 29
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00 E-value=9.6e-45 Score=313.63 Aligned_cols=193 Identities=25% Similarity=0.389 Sum_probs=168.6
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC---CCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceec
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIG---KDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVA 78 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~---~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~ 78 (211)
+++||+|||+.+++|++++|++||++|+++++|++++.+ ++..++.+++.++||++|+++|++|++|+++. .+|.+
T Consensus 275 l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~-~~R~~ 353 (472)
T PLN02987 275 LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGG-IFRRA 353 (472)
T ss_pred HHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCC-ccccC
Confidence 578999999999999999999999999999999999875 23456788899999999999999999999975 67999
Q ss_pred CCCeeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 79 RDDCRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 79 ~~d~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
.+|++++|+.||+|+.|+++.+.+|+|+++|+||++|+||||++++.. ...+..++|||.|+|.|+|++||.+|+++++
T Consensus 354 ~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~-~~~~~~~l~FG~G~r~C~G~~lA~~e~~~~l 432 (472)
T PLN02987 354 MTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGT-TVPSNVFTPFGGGPRLCPGYELARVALSVFL 432 (472)
T ss_pred CCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCC-CCCCcceECCCCCCcCCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999975422 2234579999999999999999999999999
Q ss_pred HHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcCC
Q 036210 159 ANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRLS 204 (211)
Q Consensus 159 ~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (211)
+.|+++|+|+++++. +.. +..++.|..++.++++ +|.+
T Consensus 433 a~ll~~f~~~~~~~~-----~~~--~~~~~~p~~~~~~~~~-~r~~ 470 (472)
T PLN02987 433 HRLVTRFSWVPAEQD-----KLV--FFPTTRTQKRYPINVK-RRDV 470 (472)
T ss_pred HHHHhceEEEECCCC-----cee--ecccccCCCCceEEEE-eccc
Confidence 999999999986552 222 2346677778899988 7754
No 30
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-43 Score=290.69 Aligned_cols=196 Identities=31% Similarity=0.568 Sum_probs=173.7
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCC-CCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRW-VEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARD 80 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~-~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~ 80 (211)
+++||..||+.+..|++++|++|||+++.+++|+.++++++.. ++.+++++||.|++||+|||||+||.+. .-|.+.+
T Consensus 281 ~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~-~~R~v~~ 359 (486)
T KOG0684|consen 281 LLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHS-LMRKVHE 359 (486)
T ss_pred HHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccCCCCCHHHHhcchHHHHHHHHHHhcCCchhh-HHHhhcc
Confidence 3789999999999999999999999999999999999988655 8999999999999999999999998887 5599999
Q ss_pred CeeecC----eeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCC----CCCcceeccCCCCCCCccHHHHHH
Q 036210 81 DCRVAG----YDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVK----GHDFQLLPFGSGRRICPGYALGLK 152 (211)
Q Consensus 81 d~~i~g----~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~----~~~~~~~~Fg~G~r~C~G~~lA~~ 152 (211)
|.++.+ |.||+|..|.++...+|+||++|+||+.|+|+||++++++.+ .-.+.+||||+|.|.|||++||.+
T Consensus 360 D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~ 439 (486)
T KOG0684|consen 360 DLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYL 439 (486)
T ss_pred ceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHH
Confidence 999987 999999999999999999999999999999999998765442 234567999999999999999999
Q ss_pred HHHHHHHHHHhhCeeeccCCCCCCCCCcccccceeeccCCCeEEEecCCcC
Q 036210 153 VIQSTLANLLYGFEWKLPGDMKNEDLDMEDRFGLTMSRKTPLVVVPSKPRL 203 (211)
Q Consensus 153 e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (211)
|++.++..+|+.|++++.++ ..+.+++. .+++.|..++.++-+ .|+
T Consensus 440 eIk~~~~l~L~~fdleLid~-~~P~~d~s---~~v~~P~g~v~irYK-~R~ 485 (486)
T KOG0684|consen 440 EIKQFISLLLRHFDLELIDG-PFPEVDYS---RMVMQPEGDVRIRYK-RRP 485 (486)
T ss_pred HHHHHHHHHHHHcceeecCC-CCCCCCHH---HhhcCCCCCceEEEe-ecC
Confidence 99999999999999999886 22334433 347788888989888 664
No 31
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-39 Score=274.40 Aligned_cols=144 Identities=42% Similarity=0.703 Sum_probs=136.6
Q ss_pred ceeccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCC
Q 036210 2 LLTAGTDTSAISVEWAMSELLKNPEAIQKATEELDRVIGKDRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDD 81 (211)
Q Consensus 2 l~~ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d 81 (211)
+++||+|||+++++|++|.|++||++++++++|.+. +|+.++++|+||++|+++. .+|.+++|
T Consensus 244 ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~v~E~LR~~ppv~~-~~R~~~~d 306 (411)
T COG2124 244 LLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAVVEETLRLYPPVPL-ARRVATED 306 (411)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHHHHHHHHhCCchhc-cceeccCC
Confidence 578999999999999999999999999999998864 7899999999999999998 88999999
Q ss_pred eeecCeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceeccCCCCCCCccHHHHHHHHHHHHHHH
Q 036210 82 CRVAGYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGYALGLKVIQSTLANL 161 (211)
Q Consensus 82 ~~i~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l~~l 161 (211)
++++|+.||+|+.|+++.+++||||++|++|++|+|+||. ..++|||+|+|.|+|..||++|++++++.+
T Consensus 307 ~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG~G~H~ClG~~lA~~E~~~~l~~l 376 (411)
T COG2124 307 VELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFGGGPHRCLGAALARLELKVALAEL 376 (411)
T ss_pred EeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCCCCCccccCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 368999999999999999999999999999
Q ss_pred HhhCeeeccCC
Q 036210 162 LYGFEWKLPGD 172 (211)
Q Consensus 162 l~~f~~~~~~~ 172 (211)
+++|++....+
T Consensus 377 l~r~~~~~~~~ 387 (411)
T COG2124 377 LRRFPLLLLAE 387 (411)
T ss_pred HHhCchhhcCC
Confidence 99999876554
No 32
>PLN02648 allene oxide synthase
Probab=100.00 E-value=1.6e-38 Score=274.60 Aligned_cols=164 Identities=19% Similarity=0.344 Sum_probs=142.0
Q ss_pred ccccchHHHHHHHHHHHHhCHH-HHHHHHHHHHHHhCC-CCCCCcccCCCChhHHHHHHHHhcCCCCCCCCCceecCCCe
Q 036210 5 AGTDTSAISVEWAMSELLKNPE-AIQKATEELDRVIGK-DRWVEEKDIVNLPYIEAIVKETMRLHPVAPLLLPRVARDDC 82 (211)
Q Consensus 5 ag~~tt~~~l~~~~~~l~~~p~-~~~~l~~Ei~~~~~~-~~~~~~~~~~~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d~ 82 (211)
+|++|++++++|++|+|++||+ +|++|++|++++++. ++.++.+++.+|||+++||+|+||++|+++.. .|.+.+|+
T Consensus 283 ~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~-~r~a~~d~ 361 (480)
T PLN02648 283 NAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ-YGRAREDF 361 (480)
T ss_pred HhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc-cceecCCE
Confidence 3456667899999999999995 999999999999863 44678899999999999999999999999984 47788999
Q ss_pred eec----CeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCCCCCcceecc---------CCCCCCCccHHH
Q 036210 83 RVA----GYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVKGHDFQLLPF---------GSGRRICPGYAL 149 (211)
Q Consensus 83 ~i~----g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~l 149 (211)
+++ |+.||||+.|.++.+.+|+|+++|+||++|+|+||++++... ...+++| |+|+|.|+|++|
T Consensus 362 ~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~~---~~~~~~f~~g~~~~~~G~G~R~C~G~~~ 438 (480)
T PLN02648 362 VIESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGEK---LLKYVFWSNGRETESPTVGNKQCAGKDF 438 (480)
T ss_pred EEecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCccc---cccccccCCCcccCCCCCCCccCccHHH
Confidence 996 799999999999999999999999999999999998653211 1233444 677899999999
Q ss_pred HHHHHHHHHHHHHhhCe-eeccCC
Q 036210 150 GLKVIQSTLANLLYGFE-WKLPGD 172 (211)
Q Consensus 150 A~~e~~~~l~~ll~~f~-~~~~~~ 172 (211)
|++|++++++.|+++|+ |++.++
T Consensus 439 A~~e~~~~la~Ll~~f~~~~l~~~ 462 (480)
T PLN02648 439 VVLVARLFVAELFLRYDSFEIEVD 462 (480)
T ss_pred HHHHHHHHHHHHHHHhCEEeecCC
Confidence 99999999999999998 998665
No 33
>PF05952 ComX: Bacillus competence pheromone ComX; InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible. DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=51.77 E-value=17 Score=21.97 Aligned_cols=24 Identities=25% Similarity=0.372 Sum_probs=18.4
Q ss_pred HHHHHHHHhCHHHHHHHHHHHHHH
Q 036210 15 EWAMSELLKNPEAIQKATEELDRV 38 (211)
Q Consensus 15 ~~~~~~l~~~p~~~~~l~~Ei~~~ 38 (211)
.-++.||.+||++.++|.+.-...
T Consensus 3 Q~iV~YLv~nPevl~kl~~g~asL 26 (57)
T PF05952_consen 3 QEIVNYLVQNPEVLEKLKEGEASL 26 (57)
T ss_pred HHHHHHHHHChHHHHHHHcCCeeE
Confidence 346889999999999998644433
No 34
>PF08492 SRP72: SRP72 RNA-binding domain; InterPro: IPR013699 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=51.20 E-value=11 Score=22.92 Aligned_cols=8 Identities=38% Similarity=0.887 Sum_probs=6.3
Q ss_pred CCCCccCC
Q 036210 116 RPHRFIDK 123 (211)
Q Consensus 116 ~P~R~l~~ 123 (211)
||||||..
T Consensus 44 DPERWLP~ 51 (59)
T PF08492_consen 44 DPERWLPK 51 (59)
T ss_pred CccccCch
Confidence 78899854
No 35
>PF12508 DUF3714: Protein of unknown function (DUF3714) ; InterPro: IPR022187 Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=49.46 E-value=17 Score=28.09 Aligned_cols=44 Identities=18% Similarity=0.122 Sum_probs=32.1
Q ss_pred CChhHHHHHHHHhcCCCCCCCCCceecCCCeeecCeeecCCCEEec
Q 036210 52 NLPYIEAIVKETMRLHPVAPLLLPRVARDDCRVAGYDILRNTRVVV 97 (211)
Q Consensus 52 ~l~~l~a~i~E~lRl~p~~~~~~~r~~~~d~~i~g~~ip~gt~v~~ 97 (211)
.-..+.|||.|+.-+..-.. +.-...+|+.++|..|||||.++.
T Consensus 51 ~~n~I~A~V~~~qtv~~Gs~--vrlRLle~i~i~g~~IPkgt~l~G 94 (200)
T PF12508_consen 51 EKNTIRAVVDGTQTVVDGSR--VRLRLLEDIQIGGILIPKGTYLYG 94 (200)
T ss_pred CCCeEEEEEecceEEeCCCE--EEEEEcCceEECCEEeCCCCEEEE
Confidence 34557789999887654432 323456899999999999998775
No 36
>PF09201 SRX: SRX; InterPro: IPR015284 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel. This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=49.27 E-value=14 Score=26.66 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=16.5
Q ss_pred CCccHHHHHHHHHHHHHHHHhh
Q 036210 143 ICPGYALGLKVIQSTLANLLYG 164 (211)
Q Consensus 143 ~C~G~~lA~~e~~~~l~~ll~~ 164 (211)
+|.|+.||..++-.+|.+++..
T Consensus 19 N~~gKKFsE~QiN~FIs~lIts 40 (148)
T PF09201_consen 19 NCLGKKFSETQINAFISHLITS 40 (148)
T ss_dssp ETTS----HHHHHHHHHHHHHS
T ss_pred cccchHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999954
No 37
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and metabolism]
Probab=36.98 E-value=84 Score=26.31 Aligned_cols=70 Identities=24% Similarity=0.383 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCCCCC---CCCCceecCCCeeec----CeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCccCCCCCCC
Q 036210 56 IEAIVKETMRLHPVA---PLLLPRVARDDCRVA----GYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRFIDKNIDVK 128 (211)
Q Consensus 56 l~a~i~E~lRl~p~~---~~~~~r~~~~d~~i~----g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~ 128 (211)
-+.+++.+..+.||+ |+-+.-..+.|..+= .-+|..||.|.++
T Consensus 275 ger~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~------------------------------ 324 (361)
T COG1759 275 GERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMG------------------------------ 324 (361)
T ss_pred HHHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccC------------------------------
Confidence 356777777888865 343445555664331 3456677655442
Q ss_pred CCCcceeccCCCCCCCccHHHHHHHHHHHH
Q 036210 129 GHDFQLLPFGSGRRICPGYALGLKVIQSTL 158 (211)
Q Consensus 129 ~~~~~~~~Fg~G~r~C~G~~lA~~e~~~~l 158 (211)
+++++++-||.+ +-.|+++|. |++.++
T Consensus 325 GspYs~l~~~~p--ms~GrRIA~-EIk~A~ 351 (361)
T COG1759 325 GSPYSNLYWGEP--MSTGRRIAR-EIKEAI 351 (361)
T ss_pred CCcchhhhcCCC--cchhhHHHH-HHHHHH
Confidence 234555666554 668999998 776654
No 38
>PRK06789 flagellar motor switch protein; Validated
Probab=36.77 E-value=38 Score=21.70 Aligned_cols=40 Identities=8% Similarity=0.089 Sum_probs=31.5
Q ss_pred HHHHHhcCCCCCCCCCceecCCC--eeecCeeecCCCEEecc
Q 036210 59 IVKETMRLHPVAPLLLPRVARDD--CRVAGYDILRNTRVVVN 98 (211)
Q Consensus 59 ~i~E~lRl~p~~~~~~~r~~~~d--~~i~g~~ip~gt~v~~~ 98 (211)
-++|.+.+.+.....+-+.+.+. +.++|..|.+|..|.++
T Consensus 21 ~i~dll~L~~Gsvi~Ldk~~~epvdI~vNg~lia~GEvVvv~ 62 (74)
T PRK06789 21 KIEDLLHITKGTLYRLENSTKNTVRLMLENEEIGTGKILTKN 62 (74)
T ss_pred EHHHHhcCCCCCEEEeCCcCCCCEEEEECCEEEeEEeEEEEC
Confidence 36788999888777676777665 56689999999988865
No 39
>PF08285 DPM3: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3); InterPro: IPR013174 This family corresponds to subunit 3 of dolichol-phosphate mannosyltransferase, an enzyme which generates mannosyl donors for glycosylphosphatidylinositols, N-glycan and protein O- and C-mannosylation. DPM3 is an integral membrane protein and plays a role in stabilising the dolichol-phosphate mannosyl transferase complex [].
Probab=34.42 E-value=60 Score=21.65 Aligned_cols=27 Identities=15% Similarity=0.350 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 036210 13 SVEWAMSELLKNPEAIQKATEELDRVI 39 (211)
Q Consensus 13 ~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 39 (211)
++.|.+...-..|+..+.|.+||+++-
T Consensus 55 ~lgy~v~tFnDcpeA~~eL~~eI~eAK 81 (91)
T PF08285_consen 55 TLGYGVATFNDCPEAAKELQKEIKEAK 81 (91)
T ss_pred HHHHhhhccCCCHHHHHHHHHHHHHHH
Confidence 455677777789999999999998863
No 40
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=32.24 E-value=21 Score=21.30 Aligned_cols=10 Identities=50% Similarity=1.102 Sum_probs=8.6
Q ss_pred ccCCCCCCCc
Q 036210 136 PFGSGRRICP 145 (211)
Q Consensus 136 ~Fg~G~r~C~ 145 (211)
+||-|.|.|-
T Consensus 13 kfg~GsrsC~ 22 (56)
T KOG3506|consen 13 KFGQGSRSCR 22 (56)
T ss_pred ccCCCCccee
Confidence 5999999995
No 41
>PF14129 DUF4296: Domain of unknown function (DUF4296)
Probab=31.10 E-value=1.3e+02 Score=19.50 Aligned_cols=35 Identities=14% Similarity=0.178 Sum_probs=28.5
Q ss_pred ccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 036210 5 AGTDTSAISVEWAMSELLKNPEAIQKATEELDRVI 39 (211)
Q Consensus 5 ag~~tt~~~l~~~~~~l~~~p~~~~~l~~Ei~~~~ 39 (211)
--+..++..+.-.+.+-++||+...++.+.+.+-+
T Consensus 44 kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL 78 (87)
T PF14129_consen 44 KKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL 78 (87)
T ss_pred HHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 34667778888888899999999999999887654
No 42
>PF14483 Cut8_M: Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=29.06 E-value=94 Score=17.01 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=14.6
Q ss_pred HHHHHHHHHH-hCHHHHHHHHH
Q 036210 13 SVEWAMSELL-KNPEAIQKATE 33 (211)
Q Consensus 13 ~l~~~~~~l~-~~p~~~~~l~~ 33 (211)
.+...+..++ +||++++.++.
T Consensus 14 qL~~lL~~l~~~HPei~~~i~~ 35 (38)
T PF14483_consen 14 QLQSLLQSLCERHPEIQQEIRS 35 (38)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHT
T ss_pred HHHHHHHHHHHhChhHHHHHHh
Confidence 4555666666 99998887763
No 43
>PF14550 Peptidase_U35_2: Putative phage protease XkdF
Probab=29.04 E-value=37 Score=24.02 Aligned_cols=21 Identities=33% Similarity=0.449 Sum_probs=17.5
Q ss_pred ecCCCeeecCeeecCCCEEec
Q 036210 77 VARDDCRVAGYDILRNTRVVV 97 (211)
Q Consensus 77 ~~~~d~~i~g~~ip~gt~v~~ 97 (211)
.++.|..++|-.||+|+.|..
T Consensus 72 I~~~d~~~~g~~i~~GtWv~~ 92 (122)
T PF14550_consen 72 IAPEDMEIGGETIPKGTWVVG 92 (122)
T ss_pred ecCCCcccCCeeecceEEEEE
Confidence 456689999999999999854
No 44
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=28.32 E-value=78 Score=17.66 Aligned_cols=18 Identities=11% Similarity=0.311 Sum_probs=15.2
Q ss_pred HHHHHHHHhCHHHHHHHH
Q 036210 15 EWAMSELLKNPEAIQKAT 32 (211)
Q Consensus 15 ~~~~~~l~~~p~~~~~l~ 32 (211)
.|.+.-++++||+|.-|.
T Consensus 13 l~gl~~~l~DpdvqrgL~ 30 (42)
T PF07849_consen 13 LFGLLRALRDPDVQRGLG 30 (42)
T ss_pred HHHHHHHHcCHHHHHHHH
Confidence 478888999999998775
No 45
>TIGR03779 Bac_Flav_CT_M Bacteroides conjugative transposon TraM protein. Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage.
Probab=24.97 E-value=63 Score=27.96 Aligned_cols=21 Identities=10% Similarity=0.003 Sum_probs=16.5
Q ss_pred cCCCeeecCeeecCCCEEecc
Q 036210 78 ARDDCRVAGYDILRNTRVVVN 98 (211)
Q Consensus 78 ~~~d~~i~g~~ip~gt~v~~~ 98 (211)
..+|+.++|..||+||.|+..
T Consensus 278 Lle~~~v~~~~ipkgt~l~g~ 298 (410)
T TIGR03779 278 LLEPIQAGDLVIPKGTVLYGT 298 (410)
T ss_pred EcCceeeCCEEecCCCEEEEE
Confidence 346788899999999987753
No 46
>PRK05933 type III secretion system protein; Validated
Probab=21.74 E-value=69 Score=26.80 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCCCCCCCceec---CCCeeecCeeecCCCEEecc
Q 036210 56 IEAIVKETMRLHPVAPLLLPRVA---RDDCRVAGYDILRNTRVVVN 98 (211)
Q Consensus 56 l~a~i~E~lRl~p~~~~~~~r~~---~~d~~i~g~~ip~gt~v~~~ 98 (211)
..--|+|.++|.+.....+-|.+ .-|+.++|..|.+|..|.++
T Consensus 317 T~l~IkELL~L~~GSVIeLDk~a~GEpVDI~VNGrLIARGEVVVVd 362 (372)
T PRK05933 317 YSLSVGEFLKLGPGSILQFDGVHPTLGVDIILNGAKVGRGEIIALG 362 (372)
T ss_pred ccccHHHHhccCCCCEEEeCCcCCCCCEEEEECCEEEeeeeEEEEC
Confidence 45568999999988766564443 33577899999999998875
No 47
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=21.67 E-value=33 Score=26.32 Aligned_cols=56 Identities=20% Similarity=0.377 Sum_probs=31.6
Q ss_pred CCcCCCCccCCCCCCCCCCcceeccCCCCCCCccH-----------HHHHHHHHHHHHHHHhhCeee
Q 036210 113 NEFRPHRFIDKNIDVKGHDFQLLPFGSGRRICPGY-----------ALGLKVIQSTLANLLYGFEWK 168 (211)
Q Consensus 113 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~-----------~lA~~e~~~~l~~ll~~f~~~ 168 (211)
.+|+|.||-.---........-.-|++|+=.|-|. .+|+...++-...-+.+|++.
T Consensus 50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~ 116 (200)
T KOG3302|consen 50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKIN 116 (200)
T ss_pred cccCcccccEEEEEEcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeE
Confidence 57899998421101111223457899999999963 344444444444445555554
No 48
>PF01629 DUF22: Domain of unknown function DUF22; InterPro: IPR002572 This region is found in 1 to 3 copies in archaeal proteins whose function is unknown. It only appears in multiple copies in proteins from Archaeoglobus fulgidus.
Probab=21.12 E-value=72 Score=22.21 Aligned_cols=35 Identities=17% Similarity=0.069 Sum_probs=23.5
Q ss_pred CeeecCCCEEecchHHhcCCCCCCCCCCCcCCCCc
Q 036210 86 GYDILRNTRVVVNVWAIGRDPTMWEKPNEFRPHRF 120 (211)
Q Consensus 86 g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~P~R~ 120 (211)
...||++|.+..+.+.-|.-...-.=-++..|-++
T Consensus 61 ~I~iP~~tIv~p~~~~rha~G~vi~v~e~~~p~~v 95 (112)
T PF01629_consen 61 KIEIPPNTIVMPCAYMRHALGSVIDVGEEGPPRPV 95 (112)
T ss_pred EEecCCCCEEEEchHhhccCccEEEEEeccCceee
Confidence 47799999999999988876655432233334443
No 49
>PF14459 Prok-E2_C: Prokaryotic E2 family C
Probab=20.77 E-value=37 Score=23.47 Aligned_cols=16 Identities=31% Similarity=0.507 Sum_probs=13.4
Q ss_pred cceeccCCCCCCCccH
Q 036210 132 FQLLPFGSGRRICPGY 147 (211)
Q Consensus 132 ~~~~~Fg~G~r~C~G~ 147 (211)
...+|||.|.-.|.|.
T Consensus 105 ss~~p~GaGaAaC~aA 120 (131)
T PF14459_consen 105 SSNNPFGAGAAACFAA 120 (131)
T ss_pred cccCCcCccHHHHHHH
Confidence 4679999999999875
No 50
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=20.49 E-value=1.8e+02 Score=18.15 Aligned_cols=25 Identities=12% Similarity=0.174 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHH
Q 036210 11 AISVEWAMSELLKNPEAIQKATEEL 35 (211)
Q Consensus 11 ~~~l~~~~~~l~~~p~~~~~l~~Ei 35 (211)
+...+..+--++++||.+.+++.-.
T Consensus 20 G~v~~~a~e~iaRqPE~~~~i~~~m 44 (66)
T PRK13467 20 GFLMANLFKSAARQPEMIGQLRSLM 44 (66)
T ss_pred HHHHHHHHHHHHcChhHHHhHHHHH
Confidence 3445567788999999999988643
Done!