Query 036217
Match_columns 196
No_of_seqs 54 out of 56
Neff 3.4
Searched_HMMs 13730
Date Mon Mar 25 18:08:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036217.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036217hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1h9aa2 d.81.1.5 (A:182-412,A: 40.6 2.1 0.00016 35.1 -0.7 20 34-53 53-72 (290)
2 d1qkia2 d.81.1.5 (A:200-434,A: 37.5 2.5 0.00018 34.9 -0.8 21 33-53 57-77 (297)
3 d1aiea_ a.53.1.1 (A:) p53 tetr 22.3 23 0.0017 20.4 1.9 14 27-40 6-19 (31)
4 d2fnaa1 a.4.5.11 (A:284-356) H 19.2 19 0.0014 24.1 1.3 20 168-188 9-29 (73)
5 d2nn6c2 d.101.1.1 (C:188-276) 15.9 79 0.0057 20.1 3.9 30 109-138 55-84 (89)
6 d2nn6a2 d.101.1.1 (A:185-302) 15.0 83 0.0061 21.3 4.0 31 109-139 57-87 (118)
7 d1r59o2 c.55.1.4 (O:257-491) G 14.9 29 0.0021 26.3 1.5 18 161-178 116-133 (235)
8 d2nn6e2 d.101.1.1 (E:192-285) 14.4 93 0.0068 20.1 4.0 30 109-138 55-84 (94)
9 d2je6a2 d.101.1.1 (A:192-275) 12.8 85 0.0062 19.6 3.2 30 108-137 53-82 (84)
10 d1kwga2 c.1.8.1 (A:1-393) A4 b 11.5 1.8E+02 0.013 20.3 5.0 72 112-183 278-354 (393)
No 1
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]}
Probab=40.57 E-value=2.1 Score=35.05 Aligned_cols=20 Identities=25% Similarity=0.335 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHhcccccCCc
Q 036217 34 FEMIQSHLSLVLGERLVGPL 53 (196)
Q Consensus 34 lEMI~eHL~~ilG~r~~~~~ 53 (196)
-+||||||..||..-+.-++
T Consensus 53 RDmvQNHLlQll~lvaMe~P 72 (290)
T d1h9aa2 53 LDMIQNHTMQIVGWLAMEKP 72 (290)
T ss_dssp HHTTTTHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHhCcc
Confidence 48999999999998865544
No 2
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.53 E-value=2.5 Score=34.93 Aligned_cols=21 Identities=19% Similarity=0.132 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHhcccccCCc
Q 036217 33 AFEMIQSHLSLVLGERLVGPL 53 (196)
Q Consensus 33 alEMI~eHL~~ilG~r~~~~~ 53 (196)
.-+||||||..+|..-++-++
T Consensus 57 lRDmvQNHllQll~lvaME~P 77 (297)
T d1qkia2 57 IRDVMQNHLLQMLCLVAMEKP 77 (297)
T ss_dssp HHHTTTTHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHHHHHhCCc
Confidence 358999999999998765444
No 3
>d1aiea_ a.53.1.1 (A:) p53 tetramerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.30 E-value=23 Score=20.38 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=12.3
Q ss_pred ccCCHHHHHHHHHH
Q 036217 27 SVHSPEAFEMIQSH 40 (196)
Q Consensus 27 siHS~EalEMI~eH 40 (196)
.|++.|-+||.||-
T Consensus 6 ~irgr~rfemfrel 19 (31)
T d1aiea_ 6 QIRGRERFEMFREL 19 (31)
T ss_dssp CCCSHHHHHHHHHH
T ss_pred EeccHHHHHHHHHH
Confidence 68999999999973
No 4
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=19.16 E-value=19 Score=24.12 Aligned_cols=20 Identities=15% Similarity=0.424 Sum_probs=14.5
Q ss_pred HHHHHHHhhccccc-ccccccc
Q 036217 168 MLVLEAVAFGSFMW-DSESYVE 188 (196)
Q Consensus 168 rLVLEAVaFGSFLW-DvEsyVd 188 (196)
+.||+|+|+|+ =| ++-.||+
T Consensus 9 ~~ILkaia~G~-rWs~IK~yle 29 (73)
T d2fnaa1 9 LNIMRTLSKCG-KWSDVKRALE 29 (73)
T ss_dssp HHHHHHHTTCB-CHHHHHHHHH
T ss_pred HHHHHHHHccC-cHHHHHHHHH
Confidence 57999999997 46 4455553
No 5
>d2nn6c2 d.101.1.1 (C:188-276) Exosome complex exonuclease RRP43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.95 E-value=79 Score=20.13 Aligned_cols=30 Identities=10% Similarity=0.005 Sum_probs=25.1
Q ss_pred ccCHHHHHHHHhhhhHHHHHHHHHhhhhhc
Q 036217 109 YLDAETLQRYATIRSKEAISLIEKQTQALF 138 (196)
Q Consensus 109 ~FD~eTLqr~A~iRSkEav~lIEkht~ALF 138 (196)
.|++++|++|..+=.+.+-.|.+..-+||=
T Consensus 55 ~l~~~~l~~~~~~A~~~~~~l~~~l~~al~ 84 (89)
T d2nn6c2 55 GLTGAKLQDCMSRAVTRHKEVKKLMDEVIK 84 (89)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999988888888888888777763
No 6
>d2nn6a2 d.101.1.1 (A:185-302) Exosome complex exonuclease RRP45 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.00 E-value=83 Score=21.34 Aligned_cols=31 Identities=19% Similarity=0.168 Sum_probs=26.5
Q ss_pred ccCHHHHHHHHhhhhHHHHHHHHHhhhhhcC
Q 036217 109 YLDAETLQRYATIRSKEAISLIEKQTQALFG 139 (196)
Q Consensus 109 ~FD~eTLqr~A~iRSkEav~lIEkht~ALFG 139 (196)
.|++++|++|..+=.+.+-.|.+..-.||-.
T Consensus 57 ~l~~~~l~~~~~~A~~~~~el~~~i~~aLk~ 87 (118)
T d2nn6a2 57 MLLKDQVLRCSKIAGVKVAEITELILKALEN 87 (118)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999999998888888888888888855
No 7
>d1r59o2 c.55.1.4 (O:257-491) Glycerol kinase {Enterococcus casseliflavus [TaxId: 37734]}
Probab=14.92 E-value=29 Score=26.32 Aligned_cols=18 Identities=33% Similarity=0.294 Sum_probs=15.1
Q ss_pred EechhhHHHHHHHHhhcc
Q 036217 161 VTFLGLTMLVLEAVAFGS 178 (196)
Q Consensus 161 isfs~LkrLVLEAVaFGS 178 (196)
.+-..+-|.|||+|||+.
T Consensus 116 ~~~~~l~rAvlEgiaf~~ 133 (235)
T d1r59o2 116 TTKEDFVRATLQAVAYQS 133 (235)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 456778899999999984
No 8
>d2nn6e2 d.101.1.1 (E:192-285) Exosome complex exonuclease RRP42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.45 E-value=93 Score=20.05 Aligned_cols=30 Identities=13% Similarity=0.122 Sum_probs=26.6
Q ss_pred ccCHHHHHHHHhhhhHHHHHHHHHhhhhhc
Q 036217 109 YLDAETLQRYATIRSKEAISLIEKQTQALF 138 (196)
Q Consensus 109 ~FD~eTLqr~A~iRSkEav~lIEkht~ALF 138 (196)
.|++++++.|..+=.+-+..|.+..-+||=
T Consensus 55 ~l~~~~i~~~i~~A~~~~~el~~~l~~~L~ 84 (94)
T d2nn6e2 55 SLDPESIFEMMETGKRVGKVLHASLQSVVH 84 (94)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999988888873
No 9
>d2je6a2 d.101.1.1 (A:192-275) Exosome complex exonuclease 2, ECX2 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=12.79 E-value=85 Score=19.56 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=26.0
Q ss_pred hccCHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 036217 108 MYLDAETLQRYATIRSKEAISLIEKQTQAL 137 (196)
Q Consensus 108 m~FD~eTLqr~A~iRSkEav~lIEkht~AL 137 (196)
-.|+++.+.+|-.+=.+.+..|++..-+||
T Consensus 53 ~~~~~~~i~~~i~~A~~~~~~l~~~l~~~l 82 (84)
T d2je6a2 53 GSMSLQDIDQAENTARSTAVKLLEELKKHL 82 (84)
T ss_dssp SCEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 359999999999999999999998887775
No 10
>d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]}
Probab=11.54 E-value=1.8e+02 Score=20.31 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=39.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHhhhhhcCCCceeecCCCCcccCCCceEEEechhhHHHHHHHHhhcc-----ccccc
Q 036217 112 AETLQRYATIRSKEAISLIEKQTQALFGRPDIRVLEDGSIDTSKDEVISVTFLGLTMLVLEAVAFGS-----FMWDS 183 (196)
Q Consensus 112 ~eTLqr~A~iRSkEav~lIEkht~ALFG~p~i~i~~~Gsv~~~~de~i~isfs~LkrLVLEAVaFGS-----FLWDv 183 (196)
++.....++........+.-.-..++-+.+-..+...|......|..-.-...-+++-+++|+|-|. |.|..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~aia~G~~~~gy~~W~~ 354 (393)
T d1kwga2 278 PEEKLRYARTGHPDVAAFHHDLYRGVGRGRFWVMEQQPGPVNWAPHNPSPAPGMVRLWTWEALAHGAEVVSYFRWRQ 354 (393)
T ss_dssp HHHHHHTTTTCCTTHHHHHHHHHHHHTTTCEEEEEECCSCCSSSSSCCCCCTTHHHHHHHHHHHTTCSCEEEECSBC
T ss_pred ccccccccccCCccHHHHHHHHHHHhcCCCCceeeeccccccccccCCCCChHHHHHHHHHHHHCCCCEEEEeEecC
Confidence 3333343444344444444444445555555555555443333333333345678888999999997 88853
Done!