Query 036220
Match_columns 522
No_of_seqs 271 out of 2192
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:12:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vte_A Tetrahydrocannabinolic 100.0 3.7E-88 1.3E-92 721.5 49.9 500 13-515 3-515 (518)
2 3fw9_A Reticuline oxidase; BI- 100.0 3.6E-85 1.2E-89 697.0 49.6 484 16-513 1-494 (495)
3 3tsh_A Pollen allergen PHL P 4 100.0 2E-80 6.8E-85 666.3 43.9 491 11-516 5-499 (500)
4 3rja_A Carbohydrate oxidase; p 100.0 4.1E-75 1.4E-79 618.5 41.3 456 16-514 2-473 (473)
5 3pop_A GILR oxidase; FAD bindi 100.0 1.8E-71 6.1E-76 593.1 40.0 451 31-512 8-501 (501)
6 2wdx_A Putative hexose oxidase 100.0 2.5E-68 8.7E-73 573.0 42.4 458 17-512 23-523 (523)
7 2ipi_A Aclacinomycin oxidoredu 100.0 6.4E-67 2.2E-71 562.3 44.0 459 16-513 20-520 (521)
8 2y3s_A TAML; oxidoreductase; H 100.0 5E-67 1.7E-71 563.4 43.0 466 16-514 16-529 (530)
9 1zr6_A Glucooligosaccharide ox 100.0 5.2E-67 1.8E-71 561.2 40.6 459 12-514 4-480 (503)
10 2bvf_A 6-hydroxy-D-nicotine ox 100.0 1.1E-64 3.6E-69 538.6 37.6 432 32-512 13-456 (459)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.9E-39 6.4E-44 350.7 35.3 218 13-249 30-259 (534)
12 2exr_A Cytokinin dehydrogenase 100.0 6.3E-34 2.2E-38 306.0 36.2 197 54-256 53-259 (524)
13 3pm9_A Putative oxidoreductase 100.0 1.8E-34 6.2E-39 306.1 26.9 204 54-261 43-253 (476)
14 4bby_A Alkyldihydroxyacetoneph 100.0 8.6E-34 2.9E-38 312.8 24.3 204 55-259 198-408 (658)
15 2uuu_A Alkyldihydroxyacetoneph 100.0 7.7E-32 2.6E-36 292.2 21.3 199 60-259 135-338 (584)
16 4feh_A Oxidoreductase DPRE1; a 100.0 6.7E-31 2.3E-35 278.8 22.4 198 54-261 35-238 (481)
17 1wvf_A 4-cresol dehydrogenase 100.0 8.1E-30 2.8E-34 274.5 24.6 200 60-263 54-268 (520)
18 2i0k_A Oxidoreductase; MIX alp 100.0 1.2E-29 4E-34 274.7 18.3 198 34-241 12-227 (561)
19 1e8g_A Vanillyl-alcohol oxidas 100.0 2.7E-28 9.1E-33 264.5 25.7 200 59-263 67-300 (560)
20 3js8_A Cholesterol oxidase; ch 100.0 4E-29 1.4E-33 265.3 17.9 192 38-239 11-221 (540)
21 2vfr_A Xylitol oxidase, aldito 100.0 8E-29 2.7E-33 260.2 16.7 175 54-241 12-189 (422)
22 1f0x_A DLDH, D-lactate dehydro 100.0 2.8E-28 9.7E-33 262.6 16.2 199 59-260 42-297 (571)
23 3tx1_A UDP-N-acetylenolpyruvoy 99.9 6.4E-26 2.2E-30 227.9 13.8 164 59-237 51-217 (322)
24 3i99_A UDP-N-acetylenolpyruvoy 99.9 1.7E-25 5.8E-30 227.0 13.0 165 59-237 27-199 (357)
25 1hsk_A UDP-N-acetylenolpyruvoy 99.9 7.5E-25 2.5E-29 221.5 13.6 160 59-235 45-209 (326)
26 1uxy_A MURB, uridine diphospho 99.9 6.1E-24 2.1E-28 215.1 16.6 165 59-237 11-183 (340)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.9 5.9E-23 2E-27 200.8 8.3 159 54-236 13-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.7E-19 9.3E-24 169.9 11.7 118 122-245 1-124 (219)
29 1ffv_C CUTM, flavoprotein of c 98.4 5.6E-07 1.9E-11 88.8 9.3 156 62-235 4-177 (287)
30 1n62_C Carbon monoxide dehydro 97.7 0.00012 4.1E-09 72.1 10.6 155 62-234 4-176 (288)
31 2w3s_A Xanthine dehydrogenase; 97.5 6.6E-05 2.3E-09 78.6 5.7 153 65-234 179-345 (462)
32 3nvz_B Xanthine dehydrogenase/ 96.8 0.003 1E-07 62.6 8.9 154 62-233 9-189 (305)
33 1t3q_C Quinoline 2-oxidoreduct 96.6 0.0032 1.1E-07 61.8 7.2 153 62-233 4-174 (288)
34 3hrd_C Nicotinate dehydrogenas 92.9 0.19 6.4E-06 49.3 7.2 152 63-233 3-177 (296)
35 2vfr_A Xylitol oxidase, aldito 92.7 0.071 2.4E-06 55.1 4.0 69 419-507 346-414 (422)
36 1rm6_B 4-hydroxybenzoyl-COA re 89.7 0.65 2.2E-05 46.0 7.4 77 62-145 5-84 (324)
37 4bby_A Alkyldihydroxyacetoneph 88.9 0.64 2.2E-05 50.8 7.3 29 478-506 625-654 (658)
38 1wvf_A 4-cresol dehydrogenase 86.4 0.93 3.2E-05 48.0 6.5 33 479-511 481-514 (520)
39 3unc_A Xanthine dehydrogenase/ 73.6 4.2 0.00014 47.9 6.7 79 62-147 232-313 (1332)
40 4feh_A Oxidoreductase DPRE1; a 67.0 26 0.00088 36.4 10.3 28 478-507 446-473 (481)
41 1e8g_A Vanillyl-alcohol oxidas 64.0 7.9 0.00027 41.2 5.8 25 486-510 523-547 (560)
42 2uuu_A Alkyldihydroxyacetoneph 53.8 14 0.00049 39.4 5.6 29 478-506 551-580 (584)
43 2i0k_A Oxidoreductase; MIX alp 50.1 6.3 0.00022 41.9 2.1 22 486-507 533-554 (561)
44 1f0x_A DLDH, D-lactate dehydro 44.8 12 0.00042 39.8 3.3 32 484-516 535-566 (571)
45 3js8_A Cholesterol oxidase; ch 40.8 10 0.00034 40.1 1.8 23 485-507 511-533 (540)
46 3zyv_A AOH1; oxidoreductase, m 35.6 25 0.00086 41.4 4.3 80 64-148 241-321 (1335)
47 1wn2_A Peptidyl-tRNA hydrolase 32.1 76 0.0026 26.1 5.6 38 60-97 53-91 (121)
48 1xty_A PTH, peptidyl-tRNA hydr 31.8 78 0.0027 26.0 5.6 42 54-97 48-90 (120)
49 2zv3_A PTH, peptidyl-tRNA hydr 31.5 75 0.0026 25.9 5.4 42 54-97 43-85 (115)
50 1rlk_A Hypothetical protein TA 30.9 76 0.0026 25.9 5.4 42 54-97 45-87 (117)
51 1rzw_A Protein AF2095(GR4); be 29.0 69 0.0023 26.5 4.7 42 54-97 42-84 (123)
52 1q7s_A BIT1, protein CGI-147; 25.0 1.3E+02 0.0045 24.4 5.8 41 54-96 45-86 (117)
No 1
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=100.00 E-value=3.7e-88 Score=721.52 Aligned_cols=500 Identities=49% Similarity=0.947 Sum_probs=425.5
Q ss_pred ccccHHhhhcccCCCCCCCcc-eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEE
Q 036220 13 LLDNFSKCLSVNSELYVPSST-FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRV 91 (522)
Q Consensus 13 ~~~~l~~c~~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~ 91 (522)
..++|.+||+....++.++++ |++|+|+.|+.++.++.+|.||+......|.+||+|+|++||+++|++|+++++||.+
T Consensus 3 ~~~~f~~c~~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~v 82 (518)
T 3vte_A 3 PRENFLKCFSKHIPNNVANPKLVYTQHDQLYMSILNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRT 82 (518)
T ss_dssp HHHHHHHHHHHHCCC----CCCEECTTSTTHHHHHHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEE
T ss_pred hhHHHHHHHHhcCCccCCCCceEECCCCcchHHHHhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEE
Confidence 346799999998777778888 9999999999998788999999998899999999999999999999999999999999
Q ss_pred EeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhC
Q 036220 92 RSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITG 171 (522)
Q Consensus 92 ~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~g 171 (522)
||||||+.+.+... +.++++|||++||+|++|+++.+|+||||+++++|+++|.++|+++.+++|.|++|||||+++|
T Consensus 83 rggGh~~~g~~~~~--~~~gvvIdl~~l~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~g 160 (518)
T 3vte_A 83 RSGGHDAEGMSYIS--QVPFVVVDLRNMHSIKIDVHSQTAWVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSG 160 (518)
T ss_dssp ESSCCCTTCTTTCC--SSSEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHT
T ss_pred ECCCcCCCCCccCC--CCCeEEEECCCCceeEEeCCCCEEEEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCC
Confidence 99999998876432 1368999999999999999999999999999999999999998789999999999999999999
Q ss_pred CCCCCcccccCccccceeEEEEEccCCcEecccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechH-H
Q 036220 172 GAYGSMMRKYGLGADNVVDARIVDASGRILDREAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLE-Q 250 (522)
Q Consensus 172 gg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~-~ 250 (522)
||+|+++++||+++|+|+++|||++||++++.+.+++|||||+|||++|+|||||+++||++|.|+.+..|.+.+..+ +
T Consensus 161 Gg~G~~s~~~G~~~D~V~~~evV~adG~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~~~~~~~~~~ 240 (518)
T 3vte_A 161 GGYGALMRNYGLAADNIIDAHLVNVDGKVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIFSVKKNMEIH 240 (518)
T ss_dssp CCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEEEEEECCCHH
T ss_pred CCCccccCCCCchhheEEEEEEEccCCeEEEeeccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEEEEEecCCHH
Confidence 999999999999999999999999999999755568999999999855899999999999999999888888877543 5
Q ss_pred HHHHHHHHHHHHHhhccccceEEEEEEEecCC---CCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcCccccccH
Q 036220 251 CATKLLHRWQEVADKLDEDLFIRVIIQVANAG---PKGEKTVTTSYNSLFLGGAERLLKVVEESFPELGLTKKDCTETSW 327 (522)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (522)
++.+++.+|+++.+++|+++++.+.+...++. +.+...+.+.+.++|+|+.+++.+.|.+.|++++....++.+++|
T Consensus 241 ~~~~~l~~~~~~~~~~p~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~w 320 (518)
T 3vte_A 241 GLVKLFNKWQNIAYKYDKDLVLMTHFITKNITDNHGKNKTTVHGYFSSIFHGGVDSLVDLMNKSFPELGIKKTDCKEFSW 320 (518)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEEEEEEEESCC-------CEEEEEEEEEEESCHHHHHHHHHHHCGGGCCCGGGEEEECH
T ss_pred HHHHHHHHHHHHHHcCCHhHeEEEEEcccCCCCCCCcCCCceEEEEEEEEeCCHHHHhhhhhhhhhhcCCCccceeecch
Confidence 67889999999999999999999888753211 112233467889999999999999998888888876677889999
Q ss_pred HHHHHHHhcCCCC-CC---ccccccCCccccccccccccCcCCCCCHHHHHHHHHHHhcC--CCceEEEEecCCccCCCC
Q 036220 328 IKSVLYIAGYPSN-TP---PEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLLGE--DSPLMIWTPYGGMMSKIS 401 (522)
Q Consensus 328 ~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~~--~~~~i~~~~~Gga~~~~~ 401 (522)
++.+.+++.++.+ .+ ++.+.++......+||.||+|+.++++++.++.+++++.+. +.+.+.++++||++++++
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~v~~~~~GGa~~~v~ 400 (518)
T 3vte_A 321 IDTTIFYSGVVNFNTANFKKEILLDRSAGKKTAFSIKLDYVKKPIPETAMVKILEKLYEEDVGAGMYVLYPYGGIMEEIS 400 (518)
T ss_dssp HHHHHHTSSSCCC-----CGGGGGCTTCSCCBEEEEEEEEESSCCCHHHHHHHHHGGGGSCTTTEEEEEEECCGGGGTSC
T ss_pred hhhhhhhhcCCccCCccchhhhhccCCcCcccceeeechhcccCCCHHHHHHHHHHHHhCCCCCeEEEEeecCccccCCC
Confidence 9988887655432 23 44455554344457788999998899999999999988763 357889999999999999
Q ss_pred CCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccC-CC-CCCCcccccchh
Q 036220 402 ESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLG-MN-KNGSSFIKSSVW 479 (522)
Q Consensus 402 ~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~-~~-~~~~~~~~~~~~ 479 (522)
.++|||+||++.+|.+++.+.|.+ ++.++++.+|++++++.|.|+.+..+.++|+||.|.+++ .. ..|.+++.++.|
T Consensus 401 ~~~TAf~hR~~~~~~~~~~~~w~~-~~~~~~~~~w~~~~~~~~~p~~~~~~~g~YvNy~D~dl~~~~~~~~~~~~~~~~w 479 (518)
T 3vte_A 401 ESAIPFPHRAGIMYELWYTASWEK-QEDNEKHINWVRSVYNFTTPYVSQNPRLAYLNYRDLDLGKTNHASPNNYTQARIW 479 (518)
T ss_dssp TTSSSCCCCTTCCEEEEEEEEECC-TTTHHHHHHHHHHHHHHTGGGSCCTTCCCCTTSCCGGGCCCCTTSCCCHHHHHHH
T ss_pred CCCCcccccCcceEEEEEEEecCC-cchhHHHHHHHHHHHHHhccccCCCCccccccCCCccccccccccccchhhhhhH
Confidence 999999999955899999999974 667788999999999999998655567899999998875 21 112234445579
Q ss_pred hhhhccccHHHHHHhhhhcCCCCccccCCCCCCCCC
Q 036220 480 GYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPPLPL 515 (522)
Q Consensus 480 ~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~~~~ 515 (522)
++.|||+||+||++||+||||+|||+++|||+|.+.
T Consensus 480 ~~~Yyg~N~~RL~~vK~~yDP~n~F~~~QsI~p~~~ 515 (518)
T 3vte_A 480 GEKYFGKNFNRLVKVKTKVDPNNFFRNEQSIPPLPP 515 (518)
T ss_dssp HHHHSSTHHHHHHHHHHHHCTTCCSCCTTCCCCCCT
T ss_pred HHHHhHhHHHHHHHHHhhcCchhcccCCCCCCCCCC
Confidence 999999999999999999999999999999999765
No 2
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=100.00 E-value=3.6e-85 Score=697.04 Aligned_cols=484 Identities=44% Similarity=0.793 Sum_probs=416.4
Q ss_pred cHHhhhcccCCCCCCCcc-eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeC
Q 036220 16 NFSKCLSVNSELYVPSST-FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSG 94 (522)
Q Consensus 16 ~l~~c~~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~gg 94 (522)
+|.+||+....++ ++ |++|+|+.|+.++.++.+|.||+....+.|.+|++|+|++||+++|++|+++++||++|||
T Consensus 1 ~~~~cl~~~~~~~---~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGg 77 (495)
T 3fw9_A 1 DLLSCLTFNGVRN---HTVFSADSDSDFNRFLHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSG 77 (495)
T ss_dssp CHHHHHHHTTCCC---EEECCCCTTCHHHHHHHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESS
T ss_pred ChhHHHhhcCCCC---CCeEECCCCCchHHHHhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4789999976532 56 9999999999998778999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCC
Q 036220 95 GHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAY 174 (522)
Q Consensus 95 Gh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~ 174 (522)
|||+.|.+...+ .+++||||++|++|++|+++.+|+||||+++.+|+++|.++|+++.+++|.|+++||||+++|||+
T Consensus 78 Gh~~~g~~~~~~--~ggvvIdl~~m~~i~vd~~~~~v~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgigG~~~gGg~ 155 (495)
T 3fw9_A 78 GHSYEGLSYTSD--TPFILIDLMNLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGF 155 (495)
T ss_dssp CCCTTCTTSCCS--SCEEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHCSSEECCCCSCTTCBHHHHHHTCCC
T ss_pred CcCCCCccccCC--CCeEEEECCCCCcEEEeCCCCEEEEcCCCCHHHHHHHHHHhcCCceeccCCCCCCeEeeeccCCCC
Confidence 999988876543 258999999999999999999999999999999999999997778899999999999999999999
Q ss_pred CCcccccCccccceeEEEEEccCCcEecccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechH-HHHH
Q 036220 175 GSMMRKYGLGADNVVDARIVDASGRILDREAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLE-QCAT 253 (522)
Q Consensus 175 g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~-~~~~ 253 (522)
|+.+++||+++|+|++++||++||++++.+.+++||||++|||++|+|||||+++||++|.|+....+.+.++.+ +++.
T Consensus 156 G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~a~ 235 (495)
T 3fw9_A 156 GMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEAT 235 (495)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTCCEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEEEEEEEECHHHHH
T ss_pred cccccCCCchhheEEEEEEEcCCCCEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEEEEeecCcHHHHH
Confidence 999999999999999999999999999855568999999999665899999999999999999888887777543 5678
Q ss_pred HHHHHHHHHHhhccccceEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcCccccccHHHHHHH
Q 036220 254 KLLHRWQEVADKLDEDLFIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPELGLTKKDCTETSWIKSVLY 333 (522)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (522)
+++.+|+++.+++|+++++.+..... .....+.+.++|+|+++++.+.|.+.|+.+++...++.+++|++.+.+
T Consensus 236 ~~l~~~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~G~~~~~~~~l~~~~~~lg~~~~~~~~~~~~~~~~~ 309 (495)
T 3fw9_A 236 SLLHKWQFVAEELEEDFTLSVLGGAD------EKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAY 309 (495)
T ss_dssp HHHHHHHHHHHHSCTTEEEEEEEEEE------TTEEEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHHHHH
T ss_pred HHHHHHHHHHhcCChhHeEEEEEcCC------CCceEEEEEEEEeCCHHHHHHHHHHhhhhcCCCccceEEcCHHHHHHH
Confidence 89999999999999999988764311 223467888999999999999998878888876677889999998887
Q ss_pred HhcCCCCCCccccccCCcc-ccccccccccCcCCCCCHHHHHHHHHHHhcCCCceEEEEecCCccCCCCCCCCCCcccCC
Q 036220 334 IAGYPSNTPPEVLLQGKSL-FKNYFKAKSDFVKDPIPETALEGLWKRLLGEDSPLMIWTPYGGMMSKISESEIPFPHRKG 412 (522)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~-~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~~~~~~i~~~~~Gga~~~~~~~~tAf~~R~~ 412 (522)
++++.. ++.+.++... .+.+||.||.|+.++++++.++.+++.+.+.+.+.+.++++||++++++.++|||+||++
T Consensus 310 ~~~~~~---~~~l~~~~~~~~~~~~~~ks~~~~~~l~~~~i~~l~~~~~~~~~~~~~~~~~GGa~~~v~~~~TAf~hR~~ 386 (495)
T 3fw9_A 310 LAGLET---VSQLNNRFLKFDERAFKTKVDLTKEPLPSKAFYGLLERLSKEPNGFIALNGFGGQMSKISSDFTPFPHRSG 386 (495)
T ss_dssp HTTCSC---GGGGGCTTSCSCCCEEEEEEEECSSCCCHHHHHHHHHHHHHCTTEEEEEEECCGGGGTSCTTTSSCCCCTT
T ss_pred Hhcccc---hhhhcCCCCCccCcceeEeehhhcCCCCHHHHHHHHHHHhhCCCcEEEecccCCccccCCCCCCCccccCc
Confidence 764331 3334444322 345788999999989999999999999887677789999999999999999999999985
Q ss_pred ceEEEEEEEecCC-CchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCC------CCcccccchhhhhhcc
Q 036220 413 TLFKIQYVSTWQD-GEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKN------GSSFIKSSVWGYKYFK 485 (522)
Q Consensus 413 ~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~------~~~~~~~~~~~~~yyg 485 (522)
.+|.+++.+.|.+ +++.+++..+|++++++.+.|+.+..++++|+||.|.+++..+. |.+++.++.|++.|||
T Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~w~~~~~~~~~p~~~~~~~~~Y~Ny~d~dl~~~~~~~~~~~~~~~~~~~~w~~~Yyg 466 (495)
T 3fw9_A 387 TRLMVEYIVAWNQSEQKKKTEFLDWLEKVYEFMKPFVSKNPRLGYVNHIDLDLGGIDWGNKTVVNNAIEISRSWGESYFL 466 (495)
T ss_dssp CCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHGGGSCCSSCCCCGGGCCGGGCCCCTTCHHHHHTHHHHHHHHHHHHHG
T ss_pred cceEEEEEEecCCCCcchhHHHHHHHHHHHHHHhhhccCCCcccccCccCccccccccccccccccccchhhhhHHHHhH
Confidence 6899999999963 13567788999999999999997555578999999998752110 1122334579999999
Q ss_pred ccHHHHHHhhhhcCCCCccccCCCCCCC
Q 036220 486 DNFNRLVKVKTKVDPDNFFRHEQSIPPL 513 (522)
Q Consensus 486 ~n~~RL~~IK~kyDP~~vF~~~q~i~~~ 513 (522)
+||+||++||+||||+|||+++|+|+|.
T Consensus 467 ~n~~RL~~vK~~yDP~n~F~~~qsI~p~ 494 (495)
T 3fw9_A 467 SNYERLIRAKTLIDPNNVFNHPQSIPPM 494 (495)
T ss_dssp GGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred hHHHHHHHHHHhhCcHhhCCCCCCCCCC
Confidence 9999999999999999999999999985
No 3
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2e-80 Score=666.27 Aligned_cols=491 Identities=44% Similarity=0.856 Sum_probs=405.3
Q ss_pred cCccccHHhhhcccCCCCCCCcceecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEE
Q 036220 11 ASLLDNFSKCLSVNSELYVPSSTFFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLR 90 (522)
Q Consensus 11 ~~~~~~l~~c~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~ 90 (522)
++..+++.+||+..+.+ ..|++|+++.|.+++.++.+|.||+.....+|.+||+|+|++||+++|++|+++++||+
T Consensus 5 ~~~~~~f~~~L~~~~~~----~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~ 80 (500)
T 3tsh_A 5 PAAKEDFLGCLVKEIPP----RLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIR 80 (500)
T ss_dssp ----CHHHHHHHHHSCG----GGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHhhCCC----CEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEE
Confidence 35667899999987642 22999999999999988999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhh
Q 036220 91 VRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHIT 170 (522)
Q Consensus 91 ~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ 170 (522)
+|||||++.|.+......+++++|||++||+|++|+++++++||+|+++++|+++|.++|+.+.+++|.|++|||||+++
T Consensus 81 ~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~ 160 (500)
T 3tsh_A 81 VRSGGHDYEGLSYRSLQPETFAVVDLNKMRAVWVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFA 160 (500)
T ss_dssp EESSCCCTTCTTTCCSSSCCEEEEECTTCCCEEEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHH
T ss_pred EEcCCcCCCCCcCCCCCcCCeEEEECcCCCCEEECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccc
Confidence 99999999987754322346899999999999999999999999999999999999999988889999999999999999
Q ss_pred CCCCCCcccccCccccceeEEEEEccCCcEecccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechHH
Q 036220 171 GGAYGSMMRKYGLGADNVVDARIVDASGRILDREAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQ 250 (522)
Q Consensus 171 ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~ 250 (522)
|||+|..+++||+++|+|+++|||++||++++.+.+++||||++|||++|+|||||+++||++|.|+.+..+...+...+
T Consensus 161 ~gg~g~~~~~~G~~~d~v~~~~vV~a~G~i~~~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~~~~~~~~~~ 240 (500)
T 3tsh_A 161 GGGFGMLLRKYGIAAENVIDVKLVDANGKLHDKKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTIFKISKTVSE 240 (500)
T ss_dssp TCCCCTTHHHHCCGGGGEEEEEEECTTSCEECHHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEEEEEEEETTT
T ss_pred cccCCccccccCChhhheeeEEEECCCceEEECCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEEEEEecCcHH
Confidence 99999999999999999999999999999998666789999999988878999999999999999998877777766556
Q ss_pred HHHHHHHHHHHHHhhccccceEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCCCcCccccccHHHH
Q 036220 251 CATKLLHRWQEVADKLDEDLFIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPELGLTKKDCTETSWIKS 330 (522)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 330 (522)
.+.+++.+|+.+.+++|+++...+.... ....+.++|+|+.+++...+...++.++.....+..++|.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 310 (500)
T 3tsh_A 241 GAVDIINKWQVVAPQLPADLMIRIIAQG----------PKATFEAMYLGTCKTLTPLMSSKFPELGMNPSHCNEMSWIQS 310 (500)
T ss_dssp THHHHHHHHHHHGGGSCTTEEEEEEESS----------SEEEEEEEESSCHHHHHHHHHHHCGGGCCCGGGCEEECHHHH
T ss_pred HHHHHHHHHHHhhhccChhhEEEEEecC----------CCcEEEEEEecchhhhhhhhhhcchhccCCccccchhhhhcc
Confidence 6778999999999999998877655431 145677899999999888888777777776666777888876
Q ss_pred HHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHhcCC-CceEEEEecCCccCCCCCCCCCCcc
Q 036220 331 VLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLLGED-SPLMIWTPYGGMMSKISESEIPFPH 409 (522)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~~~-~~~i~~~~~Gga~~~~~~~~tAf~~ 409 (522)
..+..........+.+.++......+.+.++.++.++++++.++.+++.+...+ ...+.++++||+++++++++++|+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gga~~~~~~~ata~~~ 390 (500)
T 3tsh_A 311 IPFVHLGHRDALEDDLLNRQNSFKPFAEYKSDYVYQPFPKTVWEQILNTWLVKPGAGIMIFDPYGATISATPESATPFPH 390 (500)
T ss_dssp HHHHHHCCSSCHHHHHHCCCCCCCCEEEEEEEEECSCCCHHHHHHHHHTGGGSTTCCEEEEEECCHHHHHSCTTSSSCCC
T ss_pred chhhhhccccccccccccccccccchhhhhhhhhcccCcHHHHHHHHHHhhcCCCceEEEEcccCccccCCCCccCcCcc
Confidence 655432221111122223322233344556677777788888888888765544 4677889999999999999999999
Q ss_pred cCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCCC---Ccccccchhhhhhccc
Q 036220 410 RKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKNG---SSFIKSSVWGYKYFKD 486 (522)
Q Consensus 410 R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~---~~~~~~~~~~~~yyg~ 486 (522)
|++.++++++...|. +++.+++..+|++++++.+.++.+..+.++|+||+|.+++..... ..+...++|++.|||+
T Consensus 391 R~~~l~~i~~~~~w~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~Ny~D~dlg~~~~~~~~~~~~~~~~w~~~Y~g~ 469 (500)
T 3tsh_A 391 RKGVLFNIQYVNYWF-APGAAAAPLSWSKDIYNYMEPYVSKNPRQAYANYRDIDLGRNEVVNDVSTYASGKVWGQKYFKG 469 (500)
T ss_dssp CTTCCEEEEEEEEEC-STTCCHHHHHHHHHHHHHHGGGSCCSSCCCCTTSCCGGGCCCCEETTEECHHHHHHHHHHHHGG
T ss_pred cCCcEEEEEEEEecC-CcchhHHHHHHHHHHHHHHHHHhcCCCCeEEeccccccccccccccccccccccchHHHHhhhH
Confidence 997788999999997 366778889999999999999876666789999999987632110 0122335799999999
Q ss_pred cHHHHHHhhhhcCCCCccccCCCCCCCCCc
Q 036220 487 NFNRLVKVKTKVDPDNFFRHEQSIPPLPLC 516 (522)
Q Consensus 487 n~~RL~~IK~kyDP~~vF~~~q~i~~~~~~ 516 (522)
||+||++||+||||+|||+++|||||....
T Consensus 470 Ny~RL~~IK~kyDP~nvF~~~qsI~Pl~~~ 499 (500)
T 3tsh_A 470 NFERLAITKGKVDPTDYFRNEQSIPPLIKK 499 (500)
T ss_dssp GHHHHHHHHHHHCTTCCSCCTTSCCCCCC-
T ss_pred HHHHHHHHHHHhCcccccCCCCCCCCCCCC
Confidence 999999999999999999999999997653
No 4
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=4.1e-75 Score=618.52 Aligned_cols=456 Identities=24% Similarity=0.422 Sum_probs=371.0
Q ss_pred cHHhhhcccCCCCCCCcceecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCC
Q 036220 16 NFSKCLSVNSELYVPSSTFFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGG 95 (522)
Q Consensus 16 ~l~~c~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggG 95 (522)
+|.+||+.+... |++|+|+.|+.++ .. |+....+.|.+|++|+|++||+++|++|+++++||.+||||
T Consensus 2 ~l~~cl~~~~~~------v~~p~~~~y~~~~--~~----~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggG 69 (473)
T 3rja_A 2 AIEACLSAAGVP------IDIPGTADYERDV--EP----FNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGG 69 (473)
T ss_dssp HHHHHHHHTTCC------BCCTTSHHHHHHT--CC----SBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred hHHHHHHhCCCc------EECCCCCchHHHH--HH----hhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCC
Confidence 488999997543 9999999999874 33 44444579999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCCeEEEEcCCCCCeE-EeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCC
Q 036220 96 HDYEGLSYVSETETPFIIVDLAKLRSVK-VDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAY 174 (522)
Q Consensus 96 h~~~~~~~~~d~~~~givIdl~~l~~i~-~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~ 174 (522)
||+.+.+... ..++++|||++||+|. +|+++.+|+||+|+++.+|+++|.++| .+.++.|.|+++||||+++|||+
T Consensus 70 h~~~g~~~~~--~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l~~~l~~~G-~~~~p~G~~~~vgvgG~~~ggg~ 146 (473)
T 3rja_A 70 HSYASFGFGG--ENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHLATVLNDKY-GRAISHGTCPGVGISGHFAHGGF 146 (473)
T ss_dssp CCTTCGGGTS--SSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHHH-SEECCCCSCTTCBHHHHHHTCCC
T ss_pred CCCCCCcccC--CCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHHHHHHHHcC-CEEeccCCCCCcEeeeeccCCCC
Confidence 9998654322 1357999999999996 999999999999999999999999997 37788999999999999999999
Q ss_pred CCcccccCccccceeEEEEEccCCcEec-ccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechH--HH
Q 036220 175 GSMMRKYGLGADNVVDARIVDASGRILD-REAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLE--QC 251 (522)
Q Consensus 175 g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~--~~ 251 (522)
|+.+++||+++|+|+++|||++||++++ .+.+++||||++|||+ |+|||||+++||++|.|+....+.+.+... ++
T Consensus 147 G~~~~~~G~~~D~v~~~~vV~a~G~v~~~~~~~~~dLf~a~rG~~-g~~GIVt~~~l~l~p~p~~~~~~~~~~~~~~~~~ 225 (473)
T 3rja_A 147 GFSSHMHGLAVDSVVGVTVVLADGRIVEASATENADLFWGIKGAG-SNFGIVAVWKLATFPAPKVLTRFGVTLNWKNKTS 225 (473)
T ss_dssp CTTHHHHCCGGGGEEEEEEECTTSCEEEEETTBSHHHHHHHHHHG-GGTCEEEEEEEECEECCSCEEEEEEECCCCSHHH
T ss_pred CcccccccchHhheeeEEEEecCCeEEEeCCCCCcchhhcccCCC-CceEEEEEEEEEEEeCCCceEEEEEEecCccHHH
Confidence 9999999999999999999999999997 5567899999999997 899999999999999998888887777653 34
Q ss_pred HHHHHHHHHHHHh-hccccceEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCC-CCcCccc-cccHH
Q 036220 252 ATKLLHRWQEVAD-KLDEDLFIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPELG-LTKKDCT-ETSWI 328 (522)
Q Consensus 252 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~-~~~~~ 328 (522)
+.+++++|+++.. ++|+++++.+.+. . + . .+.+.++|+|+++++.+++++++..++ +...++. +++|+
T Consensus 226 ~~~~~~~~~~~~~~~~p~~l~~~~~~~-~-~---~----~~~~~~~~~G~~~~~~~~l~pl~~~~p~~~~~~~~~~~~~~ 296 (473)
T 3rja_A 226 ALKGIEAVEDYARWVAPREVNFRIGDY-G-A---G----NPGIEGLYYGTPEQWRAAFQPLLDTLPAGYVVNPTTSLNWI 296 (473)
T ss_dssp HHHHHHHHHHHHHHTCCTTEEEEEEES-S-S---S----CCEEEEEEESCHHHHHHHHHHHHTTSCTTCEECCCEEECHH
T ss_pred HHHHHHHHHHHhhhCCChhHEEEEEEc-C-C---C----cEEEEEEecCCHHHHHHHHHHHHHhCCCCcceeeecccCHH
Confidence 7789999999987 8999998887764 1 1 1 267788999999999988887544333 3445677 89999
Q ss_pred HHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHhcCC------CceEEEEecCC---ccCC
Q 036220 329 KSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLLGED------SPLMIWTPYGG---MMSK 399 (522)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~~~------~~~i~~~~~Gg---a~~~ 399 (522)
+...++.... ..+.... . ....|+.|+.+. ++++++.++.+++.+.+.. .+.++++++|| ++++
T Consensus 297 ~~~~~~~~~~---~~~~~~~--~-~~~~~~~ks~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~ai~~ 369 (473)
T 3rja_A 297 ESVLSYSNFD---HVDFITP--Q-PVENFYAKSLTL-KSIKGDAVKNFVDYYFDVSNKVKDRFWFYQLDVHGGKNSQVTK 369 (473)
T ss_dssp HHHHHTSSSS---CCCCSSC--C-CCBEEEEEEEEE-SCCTTHHHHHHHHHHHHTGGGCCSSEEEEEEEECCSTTCGGGG
T ss_pred HHHHhhhcCC---CcccccC--C-CCCcceEecccc-CCCCHHHHHHHHHHHHhcCCCCCCcceEEEEEecCCcchhhcC
Confidence 9876654211 1111100 0 023466778775 4699999999999885421 13578999998 6778
Q ss_pred CCCCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCCCCcccccchh
Q 036220 400 ISESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKNGSSFIKSSVW 479 (522)
Q Consensus 400 ~~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~ 479 (522)
+++++|||+||+ ..|.+++...|.++++.+++..+|++++++.+.+.....+.++|+||+|.+++ ..+|
T Consensus 370 v~~~~TAf~hR~-~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~YvNy~d~~~~----------~~~~ 438 (473)
T 3rja_A 370 VTNAETAYPHRD-KLWLIQFYDRYDNNQTYPETSFKFLDGWVNSVTKALPKSDWGMYINYADPRMD----------RDYA 438 (473)
T ss_dssp SCTTTSSCCCTT-CSEEEEEEEEECTTSCCCTTTHHHHHHHHHHHHTTSCGGGEECCGGGCCCSSC----------HHHH
T ss_pred CCCCCCccccCC-ccEEEEEEEEeCCCCccchHHHHHHHHHHHHHHhhCCCCCCceEecCCCcccc----------chhH
Confidence 899999999999 68999999999632344556678888877776544322345899999998864 1369
Q ss_pred hhhhccccHHHHHHhhhhcCCCCccccCCCCCCCC
Q 036220 480 GYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPPLP 514 (522)
Q Consensus 480 ~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~~~ 514 (522)
++.|||+||+||++||+||||+|+|+++|||+|.+
T Consensus 439 ~~~yyg~n~~RL~~vK~kyDP~n~F~~~qsI~p~~ 473 (473)
T 3rja_A 439 TKVYYGENLARLQKLKAKFDPTDRFYYPQAVRPVK 473 (473)
T ss_dssp HHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHhhccCchhhCCCCcCCCCCC
Confidence 99999999999999999999999999999999975
No 5
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=100.00 E-value=1.8e-71 Score=593.07 Aligned_cols=451 Identities=22% Similarity=0.384 Sum_probs=351.1
Q ss_pred Ccc-eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCC
Q 036220 31 SST-FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETET 109 (522)
Q Consensus 31 ~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~ 109 (522)
+.+ |++|+|+.|++++ ..||.||. ..|.+||.|+|++||+++|++|+++++||++||||||+.+.+...+
T Consensus 8 ~~~~~~~p~~~~y~~~~--~~~n~~~~----~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~--- 78 (501)
T 3pop_A 8 VPPFTVGREDPRYIELS--HSDNHRFV----VEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPR--- 78 (501)
T ss_dssp -CCEEEETTSTTHHHHT--CCSCTTSC----CCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSC---
T ss_pred CCCceECCCCcchHHHH--HHHhhccC----CCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCC---
Confidence 566 9999999999985 35666664 5999999999999999999999999999999999999998776542
Q ss_pred CeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHh-cCCcceecCCCCCCccchhhhhCCCCCCcccccCccccce
Q 036220 110 PFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISE-KSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNV 188 (522)
Q Consensus 110 ~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v 188 (522)
++++|||++||+|++|+++.+|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|+++++||+++|+|
T Consensus 79 ~gvvIdl~~l~~i~vd~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~G~~~~~~G~~~D~v 156 (501)
T 3pop_A 79 RDLVLDLHNLHAIGPAADGAGVRVGSGATVDQVQKALFRRWN--AALPLGACSAVGMGGLVAGGGYGPLSRQLGLVVDHL 156 (501)
T ss_dssp CSEEEECTTCCCEEECTTSSSEEEETTCBHHHHHHHHHHHHS--BCCCCCSBTTCBHHHHHHHCCCCTTHHHHCCGGGGE
T ss_pred CEEEEEecccCCeEEcCCCCEEEEECCcCHHHHHHHHHhhcC--eEeCCCCCCCceEeeccccCCCcccccccccHHHhE
Confidence 579999999999999999999999999999999999975 55 678899999999999999999999999999999999
Q ss_pred eEEEEEc--cCCc--Eecc----cCCCcchhhhhhccCCCceEEEEEEEEEE----------EecC-ceEEEEEEEechH
Q 036220 189 VDARIVD--ASGR--ILDR----EAMGEDFFWAIRGGGGASFGVILAWKIKL----------VPVP-ATVTVFTVTKTLE 249 (522)
Q Consensus 189 ~~~~vv~--~~G~--~~~~----~~~~~dl~~a~rg~~~g~~Givt~~~lk~----------~p~p-~~~~~~~~~~~~~ 249 (522)
+++|||+ +||+ +++. +.+|+|||||+||||+|+|||||+++||+ +|.+ ..+..+.+.|+..
T Consensus 157 ~~~evV~~da~G~~~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~~~~~~~~~~~~p~~~~~v~~~~~~~~~~ 236 (501)
T 3pop_A 157 HAVEVAVVDESRTVRLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRSPEHLATEPVGLPRAAGRLHVQKVVFPWA 236 (501)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECCCTTTCBTTTTBCBCCSEEEEEEEEEEGG
T ss_pred EEEEEEEecCCCCEEEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEeccccCCChhhcCCCCceEEEEEEEEchh
Confidence 9999999 8999 4432 35689999999998669999999999999 6654 4566666666542
Q ss_pred ----HHHHHHHHHHHHHHh--hccccc--eEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCc----CC-
Q 036220 250 ----QCATKLLHRWQEVAD--KLDEDL--FIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPE----LG- 316 (522)
Q Consensus 250 ----~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~----~~- 316 (522)
+.+.+++..|++|.. ..|++. .+...+..... ... .+.+..+|.|+.++..+++++++.. ++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~g~ 311 (501)
T 3pop_A 237 MIDETSFVTVMRRFFEWHERHSEPGSPESSLFATFFVNHV---SSG--VLQLMVQQDADVDPEGEILARFVASLTEGTGV 311 (501)
T ss_dssp GCCHHHHHHHHHHHHHHHHHSCCTTCGGGGEEEEEEEECG---GGC--EEEEEEEEETTTCTTCHHHHHHHHHHHTTSSC
T ss_pred hcCHHHHHHHHHHHHHHHhhccCCCccccceEEEEEecCC---CCC--eEEEEEEEeCChHHHHHHHHHHHHhhhhccCC
Confidence 234678888888865 345443 23333322210 111 3456667888876655555443321 22
Q ss_pred CCcCccccccHHHHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHhcC---CCceEEEEec
Q 036220 317 LTKKDCTETSWIKSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLLGE---DSPLMIWTPY 393 (522)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~~---~~~~i~~~~~ 393 (522)
.+..++.+++|.+...+.. .+.+ .. ....+++.|+.++.++++++.++.+++.+... +.+.++++++
T Consensus 312 ~p~~~~~~~~~~~~~~~~~-~~~~---~~------~~~~~~~~ks~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 381 (501)
T 3pop_A 312 VGIPRGGVMSWLTGTRYMS-QADC---GD------VMGARSASKSAYHRAAPTDEQLSVLHRHLHADHPGQASYVMFNSY 381 (501)
T ss_dssp CCEEEEEEEEHHHHHHHTC-BCSC---GG------GTTCEEEEEEEEESSCCCHHHHHHHHHHHTSSSCCTTEEEEEEEC
T ss_pred CccceeEEeCHHHHHhhhc-CCCC---Cc------ccccccceecccccCCCCHHHHHHHHHHHHhcCCCCceEEEEEec
Confidence 1122367889988665432 1110 00 00134677888888789999999999998753 2367889999
Q ss_pred CCccCCCCCCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhcccccc------CCCCceeccccCcccCCC
Q 036220 394 GGMMSKISESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMGPYVS------MLPRAAYVNYRDLDLGMN 467 (522)
Q Consensus 394 Gga~~~~~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~g~Y~Ny~d~~~~~~ 467 (522)
||+++++++++|||+||+ ..|++++...|. +++.++++.+|++++++.+.++.+ ..+.++|+||+|.+++..
T Consensus 382 GGav~~v~~~~TAf~hR~-~~~~~~~~~~w~-~~~~~~~~~~w~~~~~~~~~~~~~g~p~~~~~~~gaYvNy~d~dl~~~ 459 (501)
T 3pop_A 382 GGEINRRGPSDAAVPQRD-SVVKSSWFSAWQ-DAELDELHLGWLRGLYEEFFAGTGGVPVTGGRTDGCYINYPDADLLDP 459 (501)
T ss_dssp CGGGGGSCTTTSSCCCCS-CSEEEEEEEEES-CGGGHHHHHHHHHHHHHHHTGGGTTSCCTTSSBCCCCTTSCCGGGGCT
T ss_pred CcccccCCCCCCCccCcC-ccEEEEEEEEeC-CcchHHHHHHHHHHHHHHHHHhhcCCCCcCCCCCceeccCCCcccccc
Confidence 999999999999999999 689999999997 366778899999999999876531 224689999999987632
Q ss_pred CCCCcccccchhhhhhccccHHHHHHhhhhcCCCCccccCCCCCC
Q 036220 468 KNGSSFIKSSVWGYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPP 512 (522)
Q Consensus 468 ~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~ 512 (522)
+.+ +.+..|++.|||+||+||++||+||||+|+|+++|||+|
T Consensus 460 ~~~---~~~~~w~~~Yyg~N~~RL~~vK~kyDP~n~F~~~qsI~p 501 (501)
T 3pop_A 460 ARN---RSGEPWHHLYYKDNYARLRSAKRAWDPLNTFHHSMSIGL 501 (501)
T ss_dssp TTC---CSSCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred ccc---cccchHHHHHhHhHHHHHHHHHHHhCcccccCCCCCCCC
Confidence 111 112359999999999999999999999999999999997
No 6
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=100.00 E-value=2.5e-68 Score=573.00 Aligned_cols=458 Identities=25% Similarity=0.446 Sum_probs=344.8
Q ss_pred HHhhhcccCCCCCCCcceecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCC
Q 036220 17 FSKCLSVNSELYVPSSTFFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGH 96 (522)
Q Consensus 17 l~~c~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh 96 (522)
...||..... .|++|+|+.|+.++ ...||.||. ..|.+||+|+|++||+++|++|+++++||.+|||||
T Consensus 23 ~~~~l~~~~~------~v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh 91 (523)
T 2wdx_A 23 GERCLPPAGP------VKVTPDDPRYLNLK-LRGANSRFN----GEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGH 91 (523)
T ss_dssp ---CCCCCCC------EEECTTSTTHHHHH-TCSSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCC
T ss_pred chhhcccCCC------eEECCCCcchHHHH-hhhhhhccc----CCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCC
Confidence 3488887542 29999999999986 356788885 489999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHh-cCCcceecCCCCCCccchhhhhCCCCC
Q 036220 97 DYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISE-KSKTHGFPAGLCTSLGVGGHITGGAYG 175 (522)
Q Consensus 97 ~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~ggg~g 175 (522)
|+.+.+... .++++|||++||+|++|+++.+|+||+|+++.+|+++|.+ +| +.++.|.|++|||||+++|||+|
T Consensus 92 ~~~g~~~~~---~~gvvIdl~~m~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~g 166 (523)
T 2wdx_A 92 CFEDFVDNP---DVKVIIDMSLLTEIAYDPSMNAFLIEPGNTLSEVYEKLYLGWN--VTIPGGVCGGVGVGGHICGGGYG 166 (523)
T ss_dssp CSSSSSSST---TCCEEEECTTCCCEEEETTTTEEEECTTCBHHHHHHHHHHHHS--CCCCCCCCTTCBHHHHHHHTCCC
T ss_pred CCCCCccCC---CCeEEEEcccCCCEEEcCCCCEEEEcCCCCHHHHHHHHHHhcC--eEEccCCCCCCeeCccccCCCCC
Confidence 999866543 2579999999999999999999999999999999999985 76 57888999999999999999999
Q ss_pred CcccccCccccceeEEEEEccC--CcEec---ccC-CCcc--hhhhhhccCCCceEEEEEEEEEE-----------EecC
Q 036220 176 SMMRKYGLGADNVVDARIVDAS--GRILD---REA-MGED--FFWAIRGGGGASFGVILAWKIKL-----------VPVP 236 (522)
Q Consensus 176 ~~~~~~G~~~d~v~~~~vv~~~--G~~~~---~~~-~~~d--l~~a~rg~~~g~~Givt~~~lk~-----------~p~p 236 (522)
+++++||+++|+|+++|||++| |+++. ... +++| ||||+|||++|+|||||+++||+ +|.|
T Consensus 167 ~~s~~~G~~~D~v~~~evV~~d~~G~v~~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~ 246 (523)
T 2wdx_A 167 PLSRQFGSVVDYLYAVEVVVVNKQGKARVIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKP 246 (523)
T ss_dssp TTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCC
T ss_pred cccccccChhheEEEEEEEEecCCccEEEEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCC
Confidence 9999999999999999999955 99753 222 4555 99999987668999999999999 9987
Q ss_pred c-eEEEEEEEechH----HHHHHHHHHHHHHHhh--ccccc--eEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHH
Q 036220 237 A-TVTVFTVTKTLE----QCATKLLHRWQEVADK--LDEDL--FIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKV 307 (522)
Q Consensus 237 ~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 307 (522)
+ .+..+.+.|+.. +...++++.|++|... .|++. .+...+...+. ..+...+.+.+..+|.|+.++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~g~~~~~~~~ 325 (523)
T 2wdx_A 247 PATLLTSTVTFDWAGMTEAAFSRLLRNHGEWYERNSGPDSPYTGLWSQLMIGNE-VPGMGESGFMMPIQVDATRPDARRL 325 (523)
T ss_dssp CSEEEEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEECC-CTTCTTCSEEEEEEEETTSTTHHHH
T ss_pred cccEEEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCccccceEEEEEeccC-CCCCcceeEEEEEEEeCCHHHHHHH
Confidence 6 456666776542 3346788888888654 45552 23333322211 1121112355667788887666655
Q ss_pred HHhhCC---c-CC-CCcCccccccHHHHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHhc
Q 036220 308 VEESFP---E-LG-LTKKDCTETSWIKSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLLG 382 (522)
Q Consensus 308 l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~~ 382 (522)
+++++. . ++ +....+..++|.+.... .... ..+++.++.++.+.++++.+..+++.+..
T Consensus 326 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~---~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 389 (523)
T 2wdx_A 326 LDAHIEAVIDGVPPAEVPEPIEQRWLASTPG-------------RGGR---GPASKTKAGYLRKRLTDRQIQAVYENMTH 389 (523)
T ss_dssp HHHHHHHHHTTCTTCBCCCCEEEETTSSCCC-------------CCSS---CCEEEEEEEEESSCCCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhcCCCccccceeccHHHHHHh-------------hcCC---CCceeeecccccCCCCHHHHHHHHHHHHh
Confidence 554322 1 23 22233445565431100 0000 11345567777666888899999998865
Q ss_pred C---CCceEEEEecCCccCCCCCCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhcc------ccccCCCC
Q 036220 383 E---DSPLMIWTPYGGMMSKISESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMG------PYVSMLPR 453 (522)
Q Consensus 383 ~---~~~~i~~~~~Gga~~~~~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~------~~~~~~~~ 453 (522)
. +.+.+.++.+||++++++.++++|+||+ ..|++++...|.+ ++.+++..+|++++++.+. |+.+....
T Consensus 390 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~l~~~~~g~p~~~~~~~ 467 (523)
T 2wdx_A 390 MDGIDYGAVWLIGYGGKVNTVDPAATALPQRD-AILKVNYITGWAN-PGNEAKHLTWVRKLYADVYAETGGVPVPNDVSD 467 (523)
T ss_dssp CTTCSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESS-GGGHHHHHHHHHHHHHHHTGGGTTSCCSCSSBC
T ss_pred cCCCCceEEEEEecCCccccCCCccccccccC-ceEEEEEEEEcCC-CccHHHHHHHHHHHHHHHHhhhcCCCccCCCCC
Confidence 3 2356788999999999999999999999 6899999999974 5667888999999999887 32111135
Q ss_pred ceeccccCcccCCCCCCCcccccchhhhhhccccHHHHHHhhhhcCCCCccccCCCCCC
Q 036220 454 AAYVNYRDLDLGMNKNGSSFIKSSVWGYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPP 512 (522)
Q Consensus 454 g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~ 512 (522)
++|+||+|.+++..+.|.+. ..|++.|||+||+||++||+||||+|||+++|+|+|
T Consensus 468 g~Y~Ny~d~~~~~~~~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~~vF~~~qsI~p 523 (523)
T 2wdx_A 468 GAYINYPDSDLADPGLNTSG---VPWHDLYYKGNHPRLRKVKAAYDPRNHFHHALSIRP 523 (523)
T ss_dssp CCCTTSCCGGGGCTTTCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCC
T ss_pred cceecCCcccccccccccch---hHHHHHHHHHHHHHHHHHHHHhCcHhhcCCCCCCCC
Confidence 79999999987521111111 139999999999999999999999999999999987
No 7
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=100.00 E-value=6.4e-67 Score=562.32 Aligned_cols=459 Identities=23% Similarity=0.432 Sum_probs=340.7
Q ss_pred cHHhhhcccCCCCCCCcceecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCC
Q 036220 16 NFSKCLSVNSELYVPSSTFFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGG 95 (522)
Q Consensus 16 ~l~~c~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggG 95 (522)
+...|+...... |++|+|+.|+.++ ...||.||. ..|.+||.|+|++||+++|++|+++++||.+||||
T Consensus 20 ~~~~~~~~~~~~------v~~p~d~~Y~~~~-~~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggG 88 (521)
T 2ipi_A 20 DGGACGARTALV------KVDRVDRRYQDLV-TRGFNGRFR----GRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGG 88 (521)
T ss_dssp ---------CCC------EEESSSTTHHHHH-TCCSCTTCC----CCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSC
T ss_pred cccccccCCCCe------EECCCCcchHHHH-hcccccccc----CCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCC
Confidence 566787775422 9999999999986 346788885 48999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHH-hcCCcceecCCCCCCccchhhhhCCCC
Q 036220 96 HDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRIS-EKSKTHGFPAGLCTSLGVGGHITGGAY 174 (522)
Q Consensus 96 h~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~-~~g~~~~~~~g~~~~vgigG~~~ggg~ 174 (522)
||+.+.+... .++++|||++||+|++|+++.+|+||+|+++.+|+++|. ++| +.+++|.|++|||||+++|||+
T Consensus 89 h~~~g~~~~~---~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~gGg~ 163 (521)
T 2ipi_A 89 HCFEGFVDDP---AVRAVIDMSQMRQVFYDSGKRAFAVEPGATLGETYRALYLDWG--VTIPAGVCPQVGVGGHVLGGGY 163 (521)
T ss_dssp CCTTCGGGCT---TCCEEEECTTCCCEEEETTTTEEEECTTSBHHHHHHHHHHHHS--BCCCCCSCTTCBHHHHTTTTCC
T ss_pred cCCCCCcccC---CCeEEEecccCCCeEEeCCCCEEEEeCCcCHHHHHHHHHHhcC--ceeCCCCCCCcccCCcccCCCC
Confidence 9998865433 257999999999999999999999999999999999997 675 5678899999999999999999
Q ss_pred CCcccccCccccceeEEEEEccC--CcEec---ccC-CCc--chhhhhhccCCCceEEEEEEEEEE-----------Eec
Q 036220 175 GSMMRKYGLGADNVVDARIVDAS--GRILD---REA-MGE--DFFWAIRGGGGASFGVILAWKIKL-----------VPV 235 (522)
Q Consensus 175 g~~~~~~G~~~d~v~~~~vv~~~--G~~~~---~~~-~~~--dl~~a~rg~~~g~~Givt~~~lk~-----------~p~ 235 (522)
|+++++||+++|+|+++|||++| |+++. ... +++ |||||+|||++|+|||||+++||+ +|.
T Consensus 164 g~~s~~~G~~~D~v~~~evV~~d~~G~i~~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~ 243 (521)
T 2ipi_A 164 GPLSRRDGVVADHLYAVEVVVVDASGRARKVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPK 243 (521)
T ss_dssp CTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCB
T ss_pred CccccccccHhhcEEEEEEEEecCCccEEEEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCC
Confidence 99999999999999999999977 98742 222 455 499999997668999999999999 998
Q ss_pred Cc-eEEEEEEEechH----HHHHHHHHHHHHHHhh--ccccc--eEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHH
Q 036220 236 PA-TVTVFTVTKTLE----QCATKLLHRWQEVADK--LDEDL--FIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLK 306 (522)
Q Consensus 236 p~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 306 (522)
|+ .+..+.+.|+.. +...++++.|+++... .|++. .+...+.... .... .+.+...|.|+.++..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~l~~~~~~~~---~~~~--~~~~~~~~~g~~~~~~~ 318 (521)
T 2ipi_A 244 APTSTLRHIVTWDWSALTEEAFTRIIDNHGAWHQSNSAAGTPYASMHSVFYLNS---RAAG--QILLDIQIDGGLDGAEA 318 (521)
T ss_dssp CCSCEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSSSSGGGGCEEEEEEEC---TTSC--EEEEEEEEETTSTTHHH
T ss_pred CCceEEEEEEEecccccCHHHHHHHHHHHHHHHHhccCCCccccceEEEEEecc---CCCC--ceEEEEEeccCHHHHHH
Confidence 75 345555555431 2346788888888654 44441 2333332221 1111 24455668888766655
Q ss_pred HHHhhCC---c-CC-CCcCccccccHHHHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHh
Q 036220 307 VVEESFP---E-LG-LTKKDCTETSWIKSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLL 381 (522)
Q Consensus 307 ~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~ 381 (522)
.+++.+. . ++ +....+..++|.+........ . .. ..+++.++.++.++++++.+..+++.+.
T Consensus 319 ~l~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--------~~-~~~~~~~s~~~~~~~~~~~i~~~~~~~~ 385 (521)
T 2ipi_A 319 LLNDFVAAVNEGTGVEPAVQRSTEPWLRATLANKFD----T--------GG-FDRTKSKGAYLRKPWTAAQAATLYRHLS 385 (521)
T ss_dssp HHHHHHHHHTTTCSSCCEEEEEEECHHHHHTCCCCC----C--------TT-CCEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCccceeeecCHHHHHHhhcCC----C--------CC-CccceeeccccccCCCHHHHHHHHHHHH
Confidence 5544221 1 23 223345567887743221100 0 00 0123446666666788899999999987
Q ss_pred cCC--CceEEEEecCCccCCCCCCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhcccccc------CCCC
Q 036220 382 GED--SPLMIWTPYGGMMSKISESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMGPYVS------MLPR 453 (522)
Q Consensus 382 ~~~--~~~i~~~~~Gga~~~~~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~ 453 (522)
..+ .+.+.++++||++++++.++++|+||+ ..+++++...|.+ ++.+++..+|++++++.+..... ....
T Consensus 386 ~~~~~~~~~~~~~~GG~v~~~~~~~ta~~~R~-~~~~~~~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 463 (521)
T 2ipi_A 386 ADSQVWGEVSLYSYGGKVNSVPETATATAQRD-SIIKVWMSATWMD-PAHDDANLAWIREIYREIFATTGGVPVPDDRTE 463 (521)
T ss_dssp SCCSSEEEEEEEECCGGGGGSCTTTSSCCCCS-CSEEEEEEEEESC-GGGHHHHHHHHHHHHHHHTTTTTSSCCSSSSBC
T ss_pred hCCCCceEEEEEecCCcccCCCCccccccccc-hhhhcceeEecCC-CCchHHHHHHHHHHHHHHHhhhcCCCcccCCCC
Confidence 643 357788999999999998999999999 6899999999974 56677889999999998873211 1135
Q ss_pred ceeccccCcccCCCCCCCcccccchhhhhhccccHHHHHHhhhhcCCCCccccCCCCCCC
Q 036220 454 AAYVNYRDLDLGMNKNGSSFIKSSVWGYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPPL 513 (522)
Q Consensus 454 g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~~ 513 (522)
++|+||+|.+++..+.+.+ ...|++.|||+||+||++||+||||+|||+++|+|+|.
T Consensus 464 g~Y~Ny~d~~~~~~~~~~~---~~~~~~~y~g~n~~RL~~iK~kyDP~~vF~~~qsI~p~ 520 (521)
T 2ipi_A 464 GTFINYPDVDLVDERWNTS---GVPWYTLYYKGNYPRLQKVKARWDPRDVFRHALSVRPP 520 (521)
T ss_dssp CCCTTSCCGGGGCTTTSCC---SCCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCC
T ss_pred ceEeCCCCccccccccccc---hhhHHHhhhhhHHHHHHHHHHHhCCcCEecCCCCCCCC
Confidence 7999999998752110111 12499999999999999999999999999999999985
No 8
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=100.00 E-value=5e-67 Score=563.36 Aligned_cols=466 Identities=26% Similarity=0.443 Sum_probs=341.0
Q ss_pred cHHhhhcccCCCCCCCc-c--eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEE
Q 036220 16 NFSKCLSVNSELYVPSS-T--FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVR 92 (522)
Q Consensus 16 ~l~~c~~~~~~~~~~~~-~--v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ 92 (522)
+++.|-......+ .++ + |++|+|+.|+.++ ..||.||. ..|.+||.|+|++||+++|++|+++++||.+|
T Consensus 16 ~~~~~~~~~~~~~-~~~~~~~v~~p~~~~Y~~~~--~~~n~~~~----~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ 88 (530)
T 2y3s_A 16 DIPTTENLYFQGS-EFMKHIDSVAPGDIRYEDLR--RGENLRFV----GDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVR 88 (530)
T ss_dssp -------------------CCEECTTSTTHHHHT--CCSCTTCC----CCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cchhHHHHHhhhh-hccCCceEECCCCccHHHHH--hHhhhhcc----CCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE
Confidence 4566665543221 122 2 8999999999985 35677774 58999999999999999999999999999999
Q ss_pred eCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHh-cCCcceecCCCCCCccchhhhhC
Q 036220 93 SGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISE-KSKTHGFPAGLCTSLGVGGHITG 171 (522)
Q Consensus 93 ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~-~g~~~~~~~g~~~~vgigG~~~g 171 (522)
|||||+.+.+... .++++|||++||+|++|+++.+|+||||+++.+|+++|.+ +| +.++.|.|++|||||+++|
T Consensus 89 ggGh~~~g~~~~~---~~gvvIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~~G--l~~~~G~~~~vgvgG~~~g 163 (530)
T 2y3s_A 89 SGGHCYEDFVANS---DVRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWG--VTLPGGACPDVGAGGHILG 163 (530)
T ss_dssp SSCCCSSSTTTCT---TCCEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHHHHS--CCCCCCSCTTCBHHHHHHT
T ss_pred CCCCCCCCCcccC---CCeEEEEcccCCCEEEcCCCCEEEEeCCCCHHHHHHHHHhhcC--eEEeCCCCCCCCcCCCcCC
Confidence 9999998866543 2579999999999999999999999999999999999985 76 5788899999999999999
Q ss_pred CCCCCcccccCccccceeEEEEEc--cCCcEec---ccC-CCcc--hhhhhhccCCCceEEEEEEEEEE-----------
Q 036220 172 GAYGSMMRKYGLGADNVVDARIVD--ASGRILD---REA-MGED--FFWAIRGGGGASFGVILAWKIKL----------- 232 (522)
Q Consensus 172 gg~g~~~~~~G~~~d~v~~~~vv~--~~G~~~~---~~~-~~~d--l~~a~rg~~~g~~Givt~~~lk~----------- 232 (522)
||+|+++++||+++|+|+++|||+ ++|+++. ..+ +++| ||||+|||++|+|||||+++||+
T Consensus 164 Gg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l~~~~~~~~~~~ 243 (530)
T 2y3s_A 164 GGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGR 243 (530)
T ss_dssp TCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECCCCSSCCSCGGG
T ss_pred CCCCcccccccchhhheeeEEEEEecCCCcEEEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEeecccCcccccc
Confidence 999999999999999999999999 5599742 322 4554 99999998668999999999999
Q ss_pred -EecCc-eEEEEEEEech----HHHHHHHHHHHHHHHhh--ccccc--eEEEEEEEecCCCCCCceEEEEEEEEEeCCHH
Q 036220 233 -VPVPA-TVTVFTVTKTL----EQCATKLLHRWQEVADK--LDEDL--FIRVIIQVANAGPKGEKTVTTSYNSLFLGGAE 302 (522)
Q Consensus 233 -~p~p~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 302 (522)
+|.|+ .+..+.+.|+. .+...++++.|+++... .|++. .....+.... .... .+.+...|.|+.+
T Consensus 244 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~g~~~ 318 (530)
T 2y3s_A 244 LLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCDLYSVLALTR---SQSG--ALAMTTQLDATGP 318 (530)
T ss_dssp SSCCCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHHHHSCSTTCGGGGEEEEEEEEC---GGGS--EEEEEEEEECCST
T ss_pred ccCCCCceEEEEEEEecccccCHHHHHHHHHHHHHHhhhcCCCCcccceeEEEEEecc---CCCC--cEEEEEEEeCCHH
Confidence 88875 45555555543 13346788888887654 45442 2333332221 0111 3445567888876
Q ss_pred HHHHHHHhhCC---c-CC-CCcCccccccHHHHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHH
Q 036220 303 RLLKVVEESFP---E-LG-LTKKDCTETSWIKSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLW 377 (522)
Q Consensus 303 ~~~~~l~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~ 377 (522)
+..+.+++.+. . ++ +....+..++|.+..........+ . .. .+++.++.++.++++++.++.++
T Consensus 319 ~~~~~l~p~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~-~r~~~~s~~~~~~~~~~~i~~~~ 387 (530)
T 2y3s_A 319 DAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDG--------D--MT-GRAKIKAAYARRSFDDRQIGTLY 387 (530)
T ss_dssp THHHHHHHHHHHHHTTCSSCCEEEEEEEEHHHHTTCHHHHCCC--------C--CC-SEEEEEEEEESSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCccceeeeccHHHHHHhhcCCCCC--------c--cc-ccceeeccccccCCCHHHHHHHH
Confidence 66555554221 1 33 223445667887643222110000 0 00 23455677776678889999999
Q ss_pred HHHhcCC----CceEEEEecCCccCCCCCCCCCCcccCCceEEEEEEEecCCCchhhhHHHHHHHHHHHhcc------cc
Q 036220 378 KRLLGED----SPLMIWTPYGGMMSKISESEIPFPHRKGTLFKIQYVSTWQDGEKNATKHIDWIRRLYNYMG------PY 447 (522)
Q Consensus 378 ~~~~~~~----~~~i~~~~~Gga~~~~~~~~tAf~~R~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~------~~ 447 (522)
+.+...+ .+.+.++++||++++++.+++||+||+ ..|++++...|.+ ++.+++..+|++++++.+. |+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~GGav~~~~~~~ta~~~R~-~~~~~~~~~~w~~-~~~~~~~~~w~~~~~~~l~~~~~g~p~ 465 (530)
T 2y3s_A 388 TRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRD-SILKIVYVTTWED-PAQDPVHVRWIRELYRDVYADTGGVPV 465 (530)
T ss_dssp HHHHCSSSCCTTCEEEEEECCGGGGGSCTTSSSCCCCS-CSEEEEEEEEECC-TTCHHHHHHHHHHHHHHHTGGGTTSCC
T ss_pred HHHHhcCCCCCceEEEEEecCCccccCCCCcCcccccc-cceeEEEEEecCC-CcchHHHHHHHHHHHHHHHhhhcCCCc
Confidence 9887532 367889999999999999999999999 6899999999974 5567788999999999887 32
Q ss_pred ccCCCCceeccccCcccCCCCCCCcccccchhhhhhccccHHHHHHhhhhcCCCCccccCCCCCCCC
Q 036220 448 VSMLPRAAYVNYRDLDLGMNKNGSSFIKSSVWGYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPPLP 514 (522)
Q Consensus 448 ~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~~~ 514 (522)
.+....|+|+||+|.+++..+.|.+. ..|++.|||+||+||++||+||||+|||+++|+|+|.|
T Consensus 466 ~~~~~~g~Y~Ny~d~~~~~~~~~~s~---~~~~~~yyg~n~~RL~~iK~kyDP~nvF~~~q~I~p~~ 529 (530)
T 2y3s_A 466 PGGAADGAYVNYPDVDLADEEWNTSG---VPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP 529 (530)
T ss_dssp TTTTBCCCCTTSCCGGGGCTTTCCSS---CCHHHHHHGGGHHHHHHHHHHHCTTCCSCCTTCCCCCC
T ss_pred ccCCCCceEeCCcCccccccccccch---hHHHHHHHHHHHHHHHHHHHHhCchhhcCCCCCCCCCC
Confidence 11113579999999987521111111 24999999999999999999999999999999999864
No 9
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=100.00 E-value=5.2e-67 Score=561.16 Aligned_cols=459 Identities=23% Similarity=0.436 Sum_probs=354.1
Q ss_pred CccccHHhhhcccCCCCCCCcceecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEE
Q 036220 12 SLLDNFSKCLSVNSELYVPSSTFFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRV 91 (522)
Q Consensus 12 ~~~~~l~~c~~~~~~~~~~~~~v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~ 91 (522)
...+.|+.||...... ++.|+++.|+... . +|+......|.+||+|+|++||+++|++|+++++||.+
T Consensus 4 ~~~~~l~~~l~~~~~~------~~~~~~~~y~~~~--~----~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v 71 (503)
T 1zr6_A 4 AEFNSINACLAAADVE------FHEEDSEGWDMDG--T----AFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISA 71 (503)
T ss_dssp CTTCHHHHHHHHTTCE------ECCTTSHHHHHHT--S----CSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHhhCcCCce------ecCCCccchHHHh--h----hhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEE
Confidence 3456799999864321 7889999999763 2 45544456999999999999999999999999999999
Q ss_pred EeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhC
Q 036220 92 RSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITG 171 (522)
Q Consensus 92 ~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~g 171 (522)
||||||+.+.+... ..++++|||++||+|++| ++++|+||||+++.+|+++|.+++ ++.++.|.|+++||||+++|
T Consensus 72 ~ggGh~~~~~~~~~--~~~gvvIdl~~l~~i~~d-~~~~v~v~aG~~~~~l~~~l~~~~-gl~~~~G~~~~vgvgG~~~g 147 (503)
T 1zr6_A 72 KGGGHSYGSYGFGG--EDGHLMLELDRMYRVSVD-DNNVATIQGGARLGYTALELLDQG-NRALSHGTCPAVGVGGHVLG 147 (503)
T ss_dssp ESSCCCTTCTTTTS--SSSCEEEECTTCCCEEEC-TTSCEEEETTCBHHHHHHHHHHTT-SEECCCCSCTTSBHHHHHHH
T ss_pred ECCCcCCCCCcccC--CCCcEEEECccCCCEEEC-CCCeEEEecCCCHHHHHHHHHHcC-CEEeCCCCCCcCchhhhhcC
Confidence 99999998765431 125899999999999999 888999999999999999998875 57888999999999999999
Q ss_pred CCCCCcccccCccccceeEEEEEccCCcEec-ccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEech-H
Q 036220 172 GAYGSMMRKYGLGADNVVDARIVDASGRILD-REAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTL-E 249 (522)
Q Consensus 172 gg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~-~ 249 (522)
||+|+++++||+++|+|+++|||++||++++ .+.+|+|||||+|||+ |+|||||+++||++|.|+....+.+.+.. .
T Consensus 148 Gg~g~~s~~~G~~~D~v~~~~vV~a~G~i~~~~~~~~~dL~~a~rG~~-g~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~ 226 (503)
T 1zr6_A 148 GGYGFATHTHGLTLDWLIGATVVLADASIVHVSETENADLFWALRGGG-GGFAIVSEFEFNTFEAPEIITTYQVTTTWNR 226 (503)
T ss_dssp CCCSTTHHHHCCGGGGEEEEEEECTTSCEEEEBTTBSHHHHHHHTTCC-SSSCEEEEEEECCEECCSCEEEEEEEECCCH
T ss_pred CCCCcccccccChhheEEEEEEEecCCCEEEeCCCCCccHHHHHhccC-CCcEEEEEEEEEEEecCceeEEEEEEEeCCH
Confidence 9999999999999999999999999999997 5567899999999999 79999999999999999876666666644 3
Q ss_pred HHHHHHHHHHHHHHhh-ccccceEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCCC--CcCcccccc
Q 036220 250 QCATKLLHRWQEVADK-LDEDLFIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPELGL--TKKDCTETS 326 (522)
Q Consensus 250 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~~--~~~~~~~~~ 326 (522)
+.+.+++++|+++... +|++++..+.+.. . .+.+.++|+|+.++..+.+++++..++. ....+..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------~--~~~~~~~~~g~~~~~~~~l~pl~~~~~~~~~~~~~~~~~ 296 (503)
T 1zr6_A 227 KQHVAGLKALQDWAQNTMPRELSMRLEINA--------N--ALNWEGNFFGNAKDLKKILQPIMKKAGGKSTISKLVETD 296 (503)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTBCCEEEEET--------T--EEEEEEEESSCHHHHHHHHHHHHHHTTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhcCChhHEEEEEEeC--------C--eEEEEEEEECCHHHHHHHHHHHHHhcCcCCCcCceeeCC
Confidence 4567889999998876 8888877766542 1 4566788999998888777765433333 123345677
Q ss_pred HHHHHHHHhcCCCCCCccccccCCccccccccccccCcCCCCCHHHHHHHHHHHh-cCC-C----ceEEEEecCC---cc
Q 036220 327 WIKSVLYIAGYPSNTPPEVLLQGKSLFKNYFKAKSDFVKDPIPETALEGLWKRLL-GED-S----PLMIWTPYGG---MM 397 (522)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~s~~~~~~l~~~~i~~l~~~~~-~~~-~----~~i~~~~~Gg---a~ 397 (522)
|.+....+.. ...... ......+..++.++.+..+ ++++.++.+++.+. ..+ . +.+.++++|| ++
T Consensus 297 ~~~~~~~~~~---~~~~~~--~~p~g~~~~~~~~s~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~~~av 370 (503)
T 1zr6_A 297 WYGQINTYLY---GADLNI--TYNYDVHEYFYANSLTAPR-LSDEAIQAFVDYKFDNSSVRPGRGWWIQWDFHGGKNSAL 370 (503)
T ss_dssp HHHHHTTSCT---TCCSSC--SSCCCCCBCEEEEEEEESS-CCHHHHHHHHHHHHHSCCCCTTEEEEEEEEECCSTTCSG
T ss_pred HHHHHHHHcC---CCcccc--cCCCCccccceecccchhh-CCHHHHHHHHHHHHhhCCCCCCcceEEEEEEcCCchhhh
Confidence 8764322211 100000 0011112235566777665 88889999999887 532 1 3577899999 88
Q ss_pred CCCCCCCCCCcccCCceEEEEEEEecC----CCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCCCCcc
Q 036220 398 SKISESEIPFPHRKGTLFKIQYVSTWQ----DGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKNGSSF 473 (522)
Q Consensus 398 ~~~~~~~tAf~~R~~~~~~~~~~~~w~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~ 473 (522)
.+++.++++|+||+ ..|++++...|. ++++.+++..+|++++.+.+.........|+|+||+|.+++
T Consensus 371 ~~~~~~~ta~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Nyad~~~~-------- 441 (503)
T 1zr6_A 371 AAVSNDETAYAHRD-QLWLWQFYDSIYDYENNTSPYPESGFEFMQGFVATIEDTLPEDRKGKYFNYADTTLT-------- 441 (503)
T ss_dssp GGSCTTTSSCCCTT-CSEEEEEEEEETTTTTCCTTTTTSCHHHHHHHHHHHHTTSCGGGCBCCGGGCCTTCC--------
T ss_pred cCCCcccCCccccc-ceeEEEEEeeeccccCCCccchHHHHHHHHHHHHHHHhhCCCCCCceeccCCCcccc--------
Confidence 88888999999998 688888866661 12333455567777777665543211123799999998753
Q ss_pred cccchhhhhhccccHHHHHHhhhhcCCCCccccCCCCCCCC
Q 036220 474 IKSSVWGYKYFKDNFNRLVKVKTKVDPDNFFRHEQSIPPLP 514 (522)
Q Consensus 474 ~~~~~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~q~i~~~~ 514 (522)
..+|++.|||+||+||++||+||||+|||+++|+|+|..
T Consensus 442 --~~~~~~~~yG~n~~RL~~iK~kyDP~~vF~~~~~i~~~~ 480 (503)
T 1zr6_A 442 --KEEAQKLYWRGNLEKLQAIKAKYDPEDVFGNVVSVEPIA 480 (503)
T ss_dssp --HHHHHHHHHGGGHHHHHHHHHHHCTTCTTCCTTSCCCCC
T ss_pred --cchHHHHHHHhHHHHHHHHHHHhCchhhcCCCCCCCchh
Confidence 126999999999999999999999999999999999853
No 10
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=1.1e-64 Score=538.62 Aligned_cols=432 Identities=20% Similarity=0.310 Sum_probs=332.8
Q ss_pred cc-eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCC
Q 036220 32 ST-FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETP 110 (522)
Q Consensus 32 ~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~ 110 (522)
++ |++|+++.|+.++. +|+......|.+|+.|+|++||+++|++|+++++|+.+||||||+.+.+... +
T Consensus 13 ~~~v~~p~~~~y~~~~~------~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~~~----~ 82 (459)
T 2bvf_A 13 QGEVIYPDDSGFDAIAN------IWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYATND----G 82 (459)
T ss_dssp SSEEECTTSTTHHHHHC------CSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTCCS----S
T ss_pred CceEECCCCccHHHHHH------HhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccccC----C
Confidence 44 99999999998642 4666566799999999999999999999999999999999999998766433 5
Q ss_pred eEEEEcCCCCCeEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeE
Q 036220 111 FIIVDLAKLRSVKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVD 190 (522)
Q Consensus 111 givIdl~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~ 190 (522)
+++|||++||+|++|+++.+|+||||+++.+|+++|.++| +.+++|.|+++||||+++|||+|+++++||+++|+|++
T Consensus 83 gvvi~l~~l~~i~~d~~~~~v~v~aG~~~~~l~~~l~~~G--l~~~~g~~~~~gi~G~~~gGg~g~~~~~~G~~~d~v~~ 160 (459)
T 2bvf_A 83 GIVLDLRLMNSIHIDTAGSRARIGGGVISGDLVKEAAKFG--LAAVTGMHPKVGFCGLALNGGVGFLTPKYGLASDNILG 160 (459)
T ss_dssp SEEEECTTCCCEEEETTTTEEEEETTCBHHHHHHHHHTTT--EEECCCSCTTSBHHHHHTTCCCCTTHHHHCCGGGGEEE
T ss_pred eEEEECCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHcC--CEecCCCCCCcccceeecCCCCccccccccCHhHhEEE
Confidence 7999999999999999999999999999999999999986 67888999999999999999999999999999999999
Q ss_pred EEEEccCCcEec-ccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechHHHHH--HHHHHHHHHHhhcc
Q 036220 191 ARIVDASGRILD-REAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCAT--KLLHRWQEVADKLD 267 (522)
Q Consensus 191 ~~vv~~~G~~~~-~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 267 (522)
+|||++||++++ .+.+|+||||++|||+ |+|||||+++||++|.|+....+.+.++.. .+. ++++.|+++...+|
T Consensus 161 ~~vV~~~G~i~~~~~~~~~dLf~a~rg~~-g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 238 (459)
T 2bvf_A 161 ATLVTATGDVIYCSDDERPELFWAVRGAG-PNFGVVTEVEVQLYELPRKMLAGFITWAPS-VSELAGLLTSLLDALNEMA 238 (459)
T ss_dssp EEEECTTSCEEEEESSSSHHHHHHHHHHG-GGTCEEEEEEEEEEECCCCEEEEEEEECCC-HHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCeEEEeCCCCChhhHhHhhccC-CccEEEEEEEEEEEECCCcEEEEEEEechH-HhhHHHHHHHHHHHHHhCc
Confidence 999999999997 5567899999999988 899999999999999976666666666542 234 78888998887777
Q ss_pred ccceEEEEEEEecCCCCCCceEEEEEEEEEeCCHHHHHHHHHhhCCcCC-CCcCccccccHHHHHHHHh---cCCCCCCc
Q 036220 268 EDLFIRVIIQVANAGPKGEKTVTTSYNSLFLGGAERLLKVVEESFPELG-LTKKDCTETSWIKSVLYIA---GYPSNTPP 343 (522)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 343 (522)
+.+...+ .... ...+. ..+.+...|.|+.++..+.+++. .+++ .....+..++|.+...... .++
T Consensus 239 ~~~~~~~-~~~~--~~~~~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 307 (459)
T 2bvf_A 239 DHIYPSV-FVGV--DENRA--PSVTVCVGHLGGLDIAERDIARL-RGLGRTVSDSIAVRSYDEVVALNAEVGSFE----- 307 (459)
T ss_dssp TTCCCEE-EEEE--CTTCC--EEEEEEEECCSCHHHHHHHHHHH-HTTSCCSEECCEEECHHHHHHHHHHHSCCC-----
T ss_pred Hhhcccc-ccCc--ccCCC--ceEEEEEEEeCCHHHHHHHHHHH-HHhCcchhcceeecCHHHHHhcccccccCC-----
Confidence 7764433 2111 11122 34556678899988777777653 3443 2233456678876433211 111
Q ss_pred cccccCCccccccccc-cccCcCCCCCHHHHHHHHHHHhcCC-Cc-eEEEEecCCccCCCCCCCCCCcccCCceEEEEEE
Q 036220 344 EVLLQGKSLFKNYFKA-KSDFVKDPIPETALEGLWKRLLGED-SP-LMIWTPYGGMMSKISESEIPFPHRKGTLFKIQYV 420 (522)
Q Consensus 344 ~~~~~~~~~~~~~f~~-~s~~~~~~l~~~~i~~l~~~~~~~~-~~-~i~~~~~Gga~~~~~~~~tAf~~R~~~~~~~~~~ 420 (522)
.. ...+.. ++.++.+.++.+.++.+++.+.+.+ .. .+.++.+||++.+ .+.+||+||+ ..| +++.
T Consensus 308 -------~~-~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~--~~~ta~~~R~-~~~-~~~~ 375 (459)
T 2bvf_A 308 -------DG-MSNLWIDREIAMPNARFAEAIAGNLDKFVSEPASGGSVKLEIEGMPFGN--PKRTPARHRD-AMG-VLAL 375 (459)
T ss_dssp -------CS-CEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTTTEEEEEEEECCCCCC--TTCCSSCCCS-SCE-EEEE
T ss_pred -------CC-CcceEeccccccCCCCCHHHHHHHHHHHhhCCCCCceeEEEEeCCccCC--CCCCCcccCC-cce-EEEE
Confidence 01 112222 4555542345566666666655433 32 3444555887766 5679999999 567 8889
Q ss_pred EecCCCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCCCCcccccchhhhhhcccc-HHHHHHhhhhcC
Q 036220 421 STWQDGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKNGSSFIKSSVWGYKYFKDN-FNRLVKVKTKVD 499 (522)
Q Consensus 421 ~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~yyg~n-~~RL~~IK~kyD 499 (522)
..|.+..+.++...+|++.+.+.+.++......|+|+||+|.+. .+|.+.|||+| |+||++||+|||
T Consensus 376 ~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~g~Y~N~~d~~~------------~~~~~~~yG~~n~~rL~~iK~kyD 443 (459)
T 2bvf_A 376 AEWSGAAPGSEKYPELARELDAALLRAGVTTSGFGLLNNNSEVT------------AEMVAEVYKPEVYSRLAAVKREYD 443 (459)
T ss_dssp EEECTTSTTTTHHHHHHHHHHHHHHHTTCEEEEECCGGGCSSCC------------HHHHHHHHCHHHHHHHHHHHHHHC
T ss_pred EEeCCCccchHHHHHHHHHHHHHhcccccCCCCCeeeCCCCCcc------------hHHHHHHhCcchHHHHHHHHHHhC
Confidence 99974222566788999999999998742113579999999862 26999999987 999999999999
Q ss_pred CCCccccCCCCCC
Q 036220 500 PDNFFRHEQSIPP 512 (522)
Q Consensus 500 P~~vF~~~q~i~~ 512 (522)
|+|+|+++|+|+|
T Consensus 444 P~~vF~~~~~I~p 456 (459)
T 2bvf_A 444 PENRFRHNYNIDP 456 (459)
T ss_dssp TTCCCCSSSCCCC
T ss_pred cccccCCCCCCCC
Confidence 9999999999998
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=100.00 E-value=1.9e-39 Score=350.68 Aligned_cols=218 Identities=17% Similarity=0.210 Sum_probs=172.9
Q ss_pred ccccHHhhhcccCCCCCCCcc-eecCCCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHH--c-CCe
Q 036220 13 LLDNFSKCLSVNSELYVPSST-FFSQNNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKE--L-GVH 88 (522)
Q Consensus 13 ~~~~l~~c~~~~~~~~~~~~~-v~~p~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~--~-~~~ 88 (522)
.++.|.+||+.... .+ |.. +...+... ...|+......|.+|++|+|++||+++|++|++ + ++|
T Consensus 30 ~~~~~~~~l~~~~~-----~~~v~~-~~~~~~~~------~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~ 97 (534)
T 1w1o_A 30 RGRPWPASLAALAL-----DGKLRT-DSNATAAA------STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYT 97 (534)
T ss_dssp ----------CTTT-----TTCEEC-SHHHHHHT------SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCC
T ss_pred chHHHHHHHHhcCC-----CceEec-CHHHHHHH------hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCce
Confidence 45578888887432 22 444 22233322 224655566799999999999999999999998 6 999
Q ss_pred EEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe------EEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecC-CCCC
Q 036220 89 LRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV------KVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPA-GLCT 161 (522)
Q Consensus 89 v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i------~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~-g~~~ 161 (522)
|.++|||||+.|.+... ++++|||++||+| ++|+++.+|+||||+++.+|++++.++|+ ..+. +...
T Consensus 98 v~~~G~G~~~~g~~~~~----~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl--~~~~~~~~~ 171 (534)
T 1w1o_A 98 IAFRGRGHSLMGQAFAP----GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGV--APRSWTDYL 171 (534)
T ss_dssp EEEESSCCCSSSTTCCT----TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTE--EESCCCSSC
T ss_pred EEEECCCCCCCCCcCCC----CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCC--cccCCCCCC
Confidence 99999999999877654 5799999999985 88888899999999999999999999874 3333 4446
Q ss_pred CccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec-ccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEE
Q 036220 162 SLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD-REAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVT 240 (522)
Q Consensus 162 ~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~ 240 (522)
.++|||.++++|.|..+.+||.++|+|+++|||++||++++ ...+|+||||++|||+ |+|||||+++||++|.|+...
T Consensus 172 ~~tvGG~v~~~g~g~~~~~yG~~~d~v~~~evV~~dG~v~~~~~~~~~dL~~~~rGs~-G~~GIVt~~~l~l~p~~~~~~ 250 (534)
T 1w1o_A 172 YLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGL-GQFGVITRARIAVEPAPARAR 250 (534)
T ss_dssp CSBHHHHHTTCCCSTTHHHHCCGGGSEEEEEEEETTSCEEEEESSSSHHHHHHHTTCT-TCSEEEEEEEEEEEECCSEEE
T ss_pred CEEeceeccCCCccccccccccHhhhEEEEEEEeCCccEEEECCCCChhhHhhhcCCC-CCcEEEEEEEEEEEECCcceE
Confidence 78999999999999999999999999999999999999997 5557899999999998 899999999999999998766
Q ss_pred EEEEEechH
Q 036220 241 VFTVTKTLE 249 (522)
Q Consensus 241 ~~~~~~~~~ 249 (522)
.+.+.+...
T Consensus 251 ~~~~~~~~~ 259 (534)
T 1w1o_A 251 WVRFVYTDF 259 (534)
T ss_dssp EEEEEESCH
T ss_pred EEEEEeCCH
Confidence 666666543
No 12
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=100.00 E-value=6.3e-34 Score=306.02 Aligned_cols=197 Identities=21% Similarity=0.284 Sum_probs=165.8
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeC-----C
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKE-LGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDI-----D 127 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~-~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~-----~ 127 (522)
.|+......|.+|++|+|++||+++|++|++ +++||++||||||+.|.+... ++++|||++||+|++++ +
T Consensus 53 d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~----~gvvidl~~m~~i~i~~~~~~~~ 128 (524)
T 2exr_A 53 DFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE----GGLVVDMSTTAENHFEVGYLSGG 128 (524)
T ss_dssp CTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT----TSEEEEGGGGTTSCEEEEECCSS
T ss_pred cccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC----CEEEEECcCCCCcEEeecccCCC
Confidence 4655556789999999999999999999996 999999999999999877654 47999999999997776 5
Q ss_pred C--CEEEEcCCCcHHHHHHHHH-hcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec-c
Q 036220 128 D--NSAWVQAGATIGEVYYRIS-EKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD-R 203 (522)
Q Consensus 128 ~--~~v~v~aG~~~~~l~~~l~-~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~ 203 (522)
+ .+|+||||+++.++++++. ++|+. ....+..+.++|||+++++|.|..+.+||.++|+|+++|||++||++++ .
T Consensus 129 ~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~va~ng~G~~~~~yG~~~d~V~~l~vV~~dG~v~~~~ 207 (524)
T 2exr_A 129 DATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTLSNAGVSGQAFRYGPQTSNVTELDVVTGNGDVVTCS 207 (524)
T ss_dssp SSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHHTTCCCCTTHHHHCCGGGSEEEEEEEETTSCEEEEE
T ss_pred CCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccCCCCCCcccccccCcHhhhEEEEEEEecCCeEEEEC
Confidence 5 7999999999999866655 88742 1222445678999999999999999999999999999999999999997 4
Q ss_pred cCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHH
Q 036220 204 EAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLL 256 (522)
Q Consensus 204 ~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~ 256 (522)
..+++||||++|||. |+|||||+++||++|.|+....+.+.|...+++.+.+
T Consensus 208 ~~~~~dL~~~~~Gs~-GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~ 259 (524)
T 2exr_A 208 EIENSELFFSVLGGL-GQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDA 259 (524)
T ss_dssp SSSSHHHHHHHTTCT-TSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHH
T ss_pred CCCChhHHhHhhcCC-CccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHH
Confidence 456899999999998 9999999999999999987766667765444444433
No 13
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.8e-34 Score=306.08 Aligned_cols=204 Identities=24% Similarity=0.295 Sum_probs=177.1
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe-EEeCCCCEEE
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV-KVDIDDNSAW 132 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~v~ 132 (522)
.|+......|.+|++|+|++||+++|++|+++++|++++|||||+.|.+...+ ++++|||++||+| ++|+++.+++
T Consensus 43 d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~---ggvvIdl~~m~~i~~id~~~~~v~ 119 (476)
T 3pm9_A 43 EERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHN---GEVVISLKRMDKIREIDTSSNTIT 119 (476)
T ss_dssp CTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCS---SCEEEECTTCCCEEEEETTTTEEE
T ss_pred ccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCC---CcEEEEeeCCCceEEEcCCCCeEE
Confidence 46555567999999999999999999999999999999999999998776642 5899999999998 8999999999
Q ss_pred EcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec------ccCC
Q 036220 133 VQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD------REAM 206 (522)
Q Consensus 133 v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~------~~~~ 206 (522)
||||+++.+|++++.++|+.+.+..+.+..++|||++++++.|..+.+||.++|+|+++|||++||++++ .+..
T Consensus 120 V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~~yG~~~d~V~~levV~~dG~v~~~~~~~~k~~~ 199 (476)
T 3pm9_A 120 VEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNT 199 (476)
T ss_dssp EETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEECTTSCEEECCCCCSCCCS
T ss_pred ECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCcccccCcHHHheeEEEEEccCCeEEEcCCcccCCCC
Confidence 9999999999999999986444445777789999999999999999999999999999999999999985 1335
Q ss_pred CcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHHHHHHH
Q 036220 207 GEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLLHRWQE 261 (522)
Q Consensus 207 ~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (522)
++||+|+++|+. |+|||||+++||++|.|+....+.+.++..+++.+++..+++
T Consensus 200 g~dl~~l~~Gs~-GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 200 GYDLRDLFIGAE-GTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp SCCCHHHHTTST-TSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CcCHHHHhccCC-CCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 789999999988 899999999999999998777777777655555566655544
No 14
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=8.6e-34 Score=312.81 Aligned_cols=204 Identities=23% Similarity=0.220 Sum_probs=177.5
Q ss_pred cCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccC-CCCCCeEEEEcCCCCCe-EEeCCCCEEE
Q 036220 55 YLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVS-ETETPFIIVDLAKLRSV-KVDIDDNSAW 132 (522)
Q Consensus 55 ~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~-d~~~~givIdl~~l~~i-~~d~~~~~v~ 132 (522)
|.......|.+||+|+|++||+++|++|+++++||+++|||||+.|..... +...++|+|||++||+| +||+++.+++
T Consensus 198 ~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~at 277 (658)
T 4bby_A 198 REGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAH 277 (658)
T ss_dssp HSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEE
T ss_pred hCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEE
Confidence 445556799999999999999999999999999999999999988655432 22246899999999998 9999999999
Q ss_pred EcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec-----ccCCC
Q 036220 133 VQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD-----REAMG 207 (522)
Q Consensus 133 v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-----~~~~~ 207 (522)
||||+++.+|.++|.++|+.+.+.+++...++|||++++++.|+.+.+||.+.|+|+++|||++||++++ ....+
T Consensus 278 VeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~rYG~~~d~VlgleVVlpdG~i~~~~~~~k~~aG 357 (658)
T 4bby_A 278 VEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKNIYGNIEDLVVHMKVVTPRGVIEKSCQGPRMSTG 357 (658)
T ss_dssp EETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEEECSCCCSSCCSS
T ss_pred EecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCccCcCCHHHheeeEEEEeCCCcccccccccccCCC
Confidence 9999999999999999987666667888889999999999999999999999999999999999999985 23457
Q ss_pred cchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHHHHH
Q 036220 208 EDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLLHRW 259 (522)
Q Consensus 208 ~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (522)
+||+|.++|+. |+|||||+++||++|.|+....+.+.|+..+++.+++..+
T Consensus 358 yDL~~L~iGSE-GTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i 408 (658)
T 4bby_A 358 PDIHHFIMGSE-GTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREI 408 (658)
T ss_dssp SCTHHHHTTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred cCHHHHhccCC-CcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHH
Confidence 99999999998 9999999999999999998877777776555555554443
No 15
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.98 E-value=7.7e-32 Score=292.19 Aligned_cols=199 Identities=21% Similarity=0.262 Sum_probs=167.7
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCc
Q 036220 60 MPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV-KVDIDDNSAWVQAGAT 138 (522)
Q Consensus 60 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~v~v~aG~~ 138 (522)
...|.+|++|+|++||+++|++|+++++||+++|||||+.|.+...++..++++|||++||+| ++|+++.+|+||||++
T Consensus 135 ~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~ 214 (584)
T 2uuu_A 135 KNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIM 214 (584)
T ss_dssp CCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCB
T ss_pred CCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCc
Confidence 458999999999999999999999999999999999999876654322236799999999998 8999999999999999
Q ss_pred HHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec----ccCCCcchhhhh
Q 036220 139 IGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD----REAMGEDFFWAI 214 (522)
Q Consensus 139 ~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~----~~~~~~dl~~a~ 214 (522)
+.+|+++|.++|+.+...++....++|||++++++.|+.+.+||.++|+|+++|||++||++++ ....++||+|++
T Consensus 215 ~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~~yG~~~d~V~~levVl~dG~i~~~~~~~~~~g~dl~~~~ 294 (584)
T 2uuu_A 215 GPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSDKYGDIEDMAVSFRTVTPTGTLELRNGARSGAGINYKHII 294 (584)
T ss_dssp HHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHHHHCCHHHHEEEEEEEETTEEECCC-------CCCTHHHH
T ss_pred HHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCcccccCcCcHHHheeeEEEEeCCCCEEECCccccCCCcchhhhh
Confidence 9999999999975433333334567999999999999999999999999999999999999886 334689999999
Q ss_pred hccCCCceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHHHHH
Q 036220 215 RGGGGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLLHRW 259 (522)
Q Consensus 215 rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (522)
+|+. |+|||||+++||++|.|+....+.+.++..+++.+++..+
T Consensus 295 ~Gse-GtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~ 338 (584)
T 2uuu_A 295 LGSE-GTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQI 338 (584)
T ss_dssp TTCT-TSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHH
T ss_pred ccCC-CCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHH
Confidence 9998 8999999999999999997777777776444444444444
No 16
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.97 E-value=6.7e-31 Score=278.82 Aligned_cols=198 Identities=17% Similarity=0.237 Sum_probs=167.3
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHc--CCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe-EEeCCCCE
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKEL--GVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV-KVDIDDNS 130 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~--~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~ 130 (522)
+|.. ....|.+|+.|+|++||+++|++|+++ ++|+.++|+|||+.+.+... ++++|||++||+| ++|+++++
T Consensus 35 ~W~~-~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~~----~gvvIdl~~l~~i~~~d~~~~~ 109 (481)
T 4feh_A 35 GWGR-TAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNG----GGLVIDMTPLNTIHSIDADTKL 109 (481)
T ss_dssp CTTC-CSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCCT----TSEEEECTTCCCEEEEETTTTE
T ss_pred cccC-CCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCCc----CeEEEECccCCCceEEcCCCCE
Confidence 4743 477999999999999999999999999 79999999999997655433 5799999999998 99999999
Q ss_pred EEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec-ccC-CCc
Q 036220 131 AWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD-REA-MGE 208 (522)
Q Consensus 131 v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~-~~~ 208 (522)
|+||||+++.+|+++|.++|+.+...+|. ..++|||.+++|++|..+.+||.++|+|+++|||++||++++ ... +++
T Consensus 110 v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s~~~~~~ 188 (481)
T 4feh_A 110 VDIDAGVNLDQLMKAALPFGLWVPVLPGT-RQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDA 188 (481)
T ss_dssp EEEETTCBHHHHHHHHGGGTEECSCCCSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEECSSSTTH
T ss_pred EEEcCCccHHHHHHHHHHcCCEEEEeCCc-CccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeCCCCCCh
Confidence 99999999999999999998644333455 468899999999999999999999999999999999999997 555 689
Q ss_pred chhhhhhccCCCceEEEEEEEEEEEecCceEEEE-EEEechHHHHHHHHHHHHH
Q 036220 209 DFFWAIRGGGGASFGVILAWKIKLVPVPATVTVF-TVTKTLEQCATKLLHRWQE 261 (522)
Q Consensus 209 dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~-~~~~~~~~~~~~~~~~~~~ 261 (522)
||||++|||. |+|||||+++||++|.|+..... ...+. ...++++.+++
T Consensus 189 dLf~a~rgs~-G~~GIIt~~tl~l~p~~~~~~~~~~~~~~---~l~~~~~~~~~ 238 (481)
T 4feh_A 189 ELFWATVGGN-GLTGIIMRATIEMTPTSTAYFIADGDVTA---SLDETIALHSD 238 (481)
T ss_dssp HHHHHHTTCT-TTTCEEEEEEEECEECSCSEEEEEEEECS---SHHHHHHHHSS
T ss_pred HHHHHhhccC-CCceEEEEEEEEEEeCCccEEEEEEEeCC---CHHHHHHHHHH
Confidence 9999999998 89999999999999988644332 23332 23455555543
No 17
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.97 E-value=8.1e-30 Score=274.46 Aligned_cols=200 Identities=22% Similarity=0.291 Sum_probs=165.1
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCcccCCCCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCC
Q 036220 60 MPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYE-GLSYVSETETPFIIVDLAKLRSV-KVDIDDNSAWVQAGA 137 (522)
Q Consensus 60 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~-~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~v~v~aG~ 137 (522)
...|.+|++|+|++||+++|++|+++++||.++|+|||+. |.+... ..++++|||++||+| ++|+++.+|+||||+
T Consensus 54 ~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~--~~~gvvidl~~m~~i~~id~~~~~v~v~aGv 131 (520)
T 1wvf_A 54 AHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPV--QRGQVILDLKKMNKIIKIDPEMCYALVEPGV 131 (520)
T ss_dssp GGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCS--STTCEEEECTTCCCEEEEETTTTEEEECTTC
T ss_pred CCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCC--CCCeEEEECCCCCceEEECCCCCEEEECCCC
Confidence 4589999999999999999999999999999999999986 654431 125899999999999 999999999999999
Q ss_pred cHHHHHHHHHhcCCcceec-CCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEeccc---CCCcchhhh
Q 036220 138 TIGEVYYRISEKSKTHGFP-AGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILDRE---AMGEDFFWA 213 (522)
Q Consensus 138 ~~~~l~~~l~~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~---~~~~dl~~a 213 (522)
++.+|+++|.++|+.+... .+....+||||.++++|.|.. +||.++|+|+++|||++||++++.. ..++|+|++
T Consensus 132 ~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~--~yG~~~d~v~~~evV~~dG~v~~~~~~~~~~~~l~~~ 209 (520)
T 1wvf_A 132 TFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT--PYGEHFMMQCGMEVVLANGDVYRTGMGGVPGSNTWQI 209 (520)
T ss_dssp CHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS--TTCBGGGGEEEEEEECTTSCEEECGGGGSTTCSCTTT
T ss_pred CHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc--cccchhhcEeeeEEEcCCCcEEEeCCCcCCCchhHhh
Confidence 9999999999998643221 123347899999999998876 9999999999999999999999632 357898777
Q ss_pred hhccCC---------CceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHHHHHHHHH
Q 036220 214 IRGGGG---------ASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLLHRWQEVA 263 (522)
Q Consensus 214 ~rg~~~---------g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (522)
.||+.+ ++|||||+++||++|.|+....+.+.|+..+++.++++.++++.
T Consensus 210 ~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~~~~~~f~~~~~~~~~~~~~~~~~ 268 (520)
T 1wvf_A 210 FKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFKPFEVIFEDEADIVEIVDALRPLR 268 (520)
T ss_dssp CSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred hcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 777652 48999999999999999977777777765445555566666554
No 18
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.96 E-value=1.2e-29 Score=274.75 Aligned_cols=198 Identities=14% Similarity=0.121 Sum_probs=166.4
Q ss_pred eecC-CCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCC-CCCe
Q 036220 34 FFSQ-NNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSET-ETPF 111 (522)
Q Consensus 34 v~~p-~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~-~~~g 111 (522)
|++| +++.|+... .+|+......|.+|+.|+|++||+++|++|+++++||.++|+|||+.+.+...+. ..++
T Consensus 12 ~~~p~~~~~y~~~~------~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~g 85 (561)
T 2i0k_A 12 PNFPNDIALFQQAY------QNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKV 85 (561)
T ss_dssp TTCCTTSCCEEEEE------ECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTE
T ss_pred eecCCCCHhHHHHH------hhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCe
Confidence 7888 999999752 2577767779999999999999999999999999999999999999765443321 1258
Q ss_pred EEEEc-CCCCCeEEeC--CCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCc----------c
Q 036220 112 IIVDL-AKLRSVKVDI--DDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSM----------M 178 (522)
Q Consensus 112 ivIdl-~~l~~i~~d~--~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~----------~ 178 (522)
++||| ++||+|++|+ ++++|+||||+++.+|.++|.++|+.+++.++. +.++|||.+++|++|.+ +
T Consensus 86 vvIdl~~~l~~i~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~TvGG~i~~~~~G~~l~~gG~~~~s~ 164 (561)
T 2i0k_A 86 ILADTMTHLNGITVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAP-GVLSIGGALAVNAHGAALPAVGQTTLPG 164 (561)
T ss_dssp EEEECTTTSCCEEEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSC-TTCBHHHHHHTTCCCSCCCCTTCCCCTT
T ss_pred EEEechhhCCceEecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCC-CCcccCCCcccCCcccccccCCcccccc
Confidence 99999 8999999998 788999999999999999999998654443444 66899999998888876 7
Q ss_pred cccCccccceeEEEEEccCCc---EecccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEE
Q 036220 179 RKYGLGADNVVDARIVDASGR---ILDREAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTV 241 (522)
Q Consensus 179 ~~~G~~~d~v~~~~vv~~~G~---~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~ 241 (522)
.+||.++|+|+++|||++||+ +++...+++||+|+++|.| . ||||+++||++|.++....
T Consensus 165 ~~~G~~~d~V~~~evV~~dG~~~~~~~~~~~~~dl~~a~~g~G--~-giIt~~tl~l~p~~~~~~~ 227 (561)
T 2i0k_A 165 HTYGSLSNLVTELTAVVWNGTTYALETYQRNDPRITPLLTNLG--R-CFLTSVTMQAGPNFRQRCQ 227 (561)
T ss_dssp CCSSCGGGGEEEEEEEEECSSSEEEEEEETTSGGGHHHHSCTT--S-SCEEEEEEECEECCEEEEE
T ss_pred cccccHhheEEEEEEEeCCCCEEEeeeccCCCccHHHHHhcCC--C-EEEEEEEEEEEECCceEEE
Confidence 789999999999999999999 6653345789999998554 3 8999999999999875443
No 19
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=2.7e-28 Score=264.47 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=164.5
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC-CCccc-CCCCCCeEEEEc-CCCCCe-EEeCCCCEEEEc
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYE-GLSYV-SETETPFIIVDL-AKLRSV-KVDIDDNSAWVQ 134 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~-~~~~~-~d~~~~givIdl-~~l~~i-~~d~~~~~v~v~ 134 (522)
....|.+||+|+|++||+++|++|+++++||+++|+|||+. |.+.. . .++++||| ++||+| ++|+++.+|+||
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~---~~gvvidl~~~mn~il~id~~~~~v~v~ 143 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRV---SGSVVLDMGKNMNRVLEVNVEGAYCVVE 143 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSS---TTCEEEECTTTCCCEEEEETTTTEEEEC
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCc---CCEEEEEchHhcCCeEEEcCCCCEEEEe
Confidence 34689999999999999999999999999999999999986 54442 2 15799999 999998 999999999999
Q ss_pred CCCcHHHHHHHHHhcCCc--ceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEeccc---CCCc-
Q 036220 135 AGATIGEVYYRISEKSKT--HGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILDRE---AMGE- 208 (522)
Q Consensus 135 aG~~~~~l~~~l~~~g~~--~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~~~---~~~~- 208 (522)
||+++.+|.++|.++|+. +.+.++.....||||.++++|.|.. +||.++|+|+++|||++||++++.. ..++
T Consensus 144 aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~--~yG~~~d~v~~l~vVl~dG~v~~~~~~~~~~~~ 221 (560)
T 1e8g_A 144 PGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT--PYGDHWMMHSGMEVVLANGELLRTGMGALPDPK 221 (560)
T ss_dssp TTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS--TTCBTGGGEEEEEEEETTSCEEECGGGGSCCCC
T ss_pred CCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc--cceeHHHheeeeEEEeCCCCEEEecCcccCccc
Confidence 999999999999999875 4444455556889999999888865 9999999999999999999999622 1221
Q ss_pred --------------chhhhhhcc----------CCCceEEEEEEEEEEEecCceEEEEEEEechHHHHHHHHHHHHHHH
Q 036220 209 --------------DFFWAIRGG----------GGASFGVILAWKIKLVPVPATVTVFTVTKTLEQCATKLLHRWQEVA 263 (522)
Q Consensus 209 --------------dl~~a~rg~----------~~g~~Givt~~~lk~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (522)
+++|+++++ .+|+|||||+++||++|.|+....+.+.|+..+++.+++..++++.
T Consensus 222 ~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~~ 300 (560)
T 1e8g_A 222 RPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGYQSYLITLPKDGDLKQAVDIIRPLR 300 (560)
T ss_dssp CGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCEEEEEEEECSTTHHHHHHHHHHHHH
T ss_pred ccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCceEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 566666543 2379999999999999999987777777765555666666666654
No 20
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.96 E-value=4e-29 Score=265.29 Aligned_cols=192 Identities=13% Similarity=0.133 Sum_probs=156.2
Q ss_pred CCccchhHHhhcccccccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCC-CCCCeEEEEc
Q 036220 38 NNSSFSSILESSAQNLRYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSE-TETPFIIVDL 116 (522)
Q Consensus 38 ~~~~y~~~~~~~~~n~r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d-~~~~givIdl 116 (522)
+.+.|+... .+|+......|.+|++|+|++||+++|++|+++++||+++|+|||+.+.....+ ...++++|||
T Consensus 11 ~i~~y~~~~------~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdl 84 (540)
T 3js8_A 11 EIPLYKQSF------KNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDT 84 (540)
T ss_dssp TSCCEEEEE------ECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEET
T ss_pred ccchhccee------eccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEEC
Confidence 555666542 248888888999999999999999999999999999999999999864332111 0136899999
Q ss_pred C-CCCCeEEeCC--CCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCc----------ccccCc
Q 036220 117 A-KLRSVKVDID--DNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSM----------MRKYGL 183 (522)
Q Consensus 117 ~-~l~~i~~d~~--~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~----------~~~~G~ 183 (522)
+ +||+|++|++ ..+|+||||+++.+|+++|.++|+.+...+| .+.++|||.+++|++|.. +++||.
T Consensus 85 s~~Ln~I~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~g-i~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~ 163 (540)
T 3js8_A 85 TRYLTAMSIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPA-PGDLTLGGVLAINGHGTAIPAKGERRLAGASYGS 163 (540)
T ss_dssp TTTCCCEEEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCS-CSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSC
T ss_pred cCcCCCEEECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCC-CCCeEEcccccCCCCccccccccccccccccccc
Confidence 5 7999999985 5799999999999999999999754322244 466899999999999986 689999
Q ss_pred cccceeEEEEEccCCc-----EecccCCCcchhhhhhccCCCceEEEEEEEEEEEecCceE
Q 036220 184 GADNVVDARIVDASGR-----ILDREAMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATV 239 (522)
Q Consensus 184 ~~d~v~~~~vv~~~G~-----~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~ 239 (522)
++|+|++++||++||+ +++...+++|| |++|+|. |. ||||+++||++|.++..
T Consensus 164 ~~D~V~~levV~adG~~~~~~i~~~s~~~~DL-~a~r~G~-G~-gIVTevtlrl~P~~~l~ 221 (540)
T 3js8_A 164 ISNLVLSLTAVVYDKASGAYALRKFARNDPQI-APLLAHV-GR-SLIVEATLQAAPNQRLR 221 (540)
T ss_dssp GGGGEEEEEEEEEETTTTEEEEEEEETTSGGG-HHHHTCT-TS-SCEEEEEEEEEECCEEE
T ss_pred HHHhEEEEEEEcCCCCCceeeEEEeCCCChhH-HHHHhcC-CC-eEEEEEEEEEEECCceE
Confidence 9999999999999998 66543468998 4556666 55 59999999999988644
No 21
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.96 E-value=8e-29 Score=260.22 Aligned_cols=175 Identities=19% Similarity=0.238 Sum_probs=154.7
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe-EEeCCCCEEE
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV-KVDIDDNSAW 132 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~v~ 132 (522)
+|+......|.+|+.|+|++||+++|++| +|+.++|||||+.+.+... .++++|||++||+| ++|+++++|+
T Consensus 12 ~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~---~~g~vi~l~~l~~i~~~d~~~~~v~ 84 (422)
T 2vfr_A 12 NWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPG---DGGVLLSLAGLPSVVDVDTAARTVR 84 (422)
T ss_dssp CSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCC---TTCEEECSTTSCCCEEEETTTTEEE
T ss_pred cCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCC---CCcEEEEhhhCCCcEEEcCCCCEEE
Confidence 47776778999999999999999999998 8999999999998877621 35899999999997 9999999999
Q ss_pred EcCCCcHHHHHHHHHhcCCcceec-CCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEec-ccCCCcch
Q 036220 133 VQAGATIGEVYYRISEKSKTHGFP-AGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRILD-REAMGEDF 210 (522)
Q Consensus 133 v~aG~~~~~l~~~l~~~g~~~~~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~~-~~~~~~dl 210 (522)
||||+++.+|.++|.++|+. ++ .+..+.++|||.+++|++|.. .+||.++|+|+++|+|++||++++ ...+++
T Consensus 85 v~aG~~l~~l~~~l~~~Gl~--l~~~~~~~~~tvGG~i~~~~~G~~-~~~G~~~d~v~~~~vv~~~G~~~~~~~~~~~-- 159 (422)
T 2vfr_A 85 VGGGVRYAELARVVHARGLA--LPNMASLPHISVAGSVATGTHGSG-VGNGSLASVVREVELVTADGSTVVIARGDER-- 159 (422)
T ss_dssp EETTCBHHHHHHHHHHTTEE--CSCCCSSSCSBHHHHHHHTCCCCC-TTCCCGGGGEEEEEEECTTSCEEEEETTSTT--
T ss_pred EcCCCCHHHHHHHHHHcCCc--ccCCCCCCCeeHHHHHhcCCCCCC-cccCcHHHheEEEEEEeCCCCEEEeCCCCCC--
Confidence 99999999999999999864 44 477788999999999999976 699999999999999999999997 444455
Q ss_pred hhhhhccCCCceEEEEEEEEEEEecCceEEE
Q 036220 211 FWAIRGGGGASFGVILAWKIKLVPVPATVTV 241 (522)
Q Consensus 211 ~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~ 241 (522)
||+++|+. |++||||+++||++|.|+....
T Consensus 160 f~~~~g~~-G~lGvit~~~l~l~p~~~~~~~ 189 (422)
T 2vfr_A 160 FGGAVTSL-GALGVVTSLTLDLEPAYEMEQH 189 (422)
T ss_dssp GGGTSSCT-TTTCEEEEEEEECEECCEEEEE
T ss_pred cceEEecC-CCCEEEEEEEEEEEecCceEEE
Confidence 89999988 8999999999999999875543
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.95 E-value=2.8e-28 Score=262.55 Aligned_cols=199 Identities=12% Similarity=0.112 Sum_probs=163.6
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCC--CeEEEEcCCCCCe-EEeCCCCEEEEcC
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETET--PFIIVDLAKLRSV-KVDIDDNSAWVQA 135 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~--~givIdl~~l~~i-~~d~~~~~v~v~a 135 (522)
....|.+||+|+|++||+++|++|+++++||.++|||||+.|.+...+++. ++++|||++||+| ++|+ +++|+|||
T Consensus 42 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~a 120 (571)
T 1f0x_A 42 GQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYP 120 (571)
T ss_dssp CBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECT
T ss_pred cCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECC-CCeEEEcC
Confidence 346899999999999999999999999999999999999998776652111 3899999999998 7984 57999999
Q ss_pred CCcHHHHHHHHHhcCCcceecC-CCCCCccchhhhhCCCCCCcccccCcccc----------------ceeEEEEEccCC
Q 036220 136 GATIGEVYYRISEKSKTHGFPA-GLCTSLGVGGHITGGAYGSMMRKYGLGAD----------------NVVDARIVDASG 198 (522)
Q Consensus 136 G~~~~~l~~~l~~~g~~~~~~~-g~~~~vgigG~~~ggg~g~~~~~~G~~~d----------------~v~~~~vv~~~G 198 (522)
|+++.+|.++|.++|+.+.... +.|..++|||.+++++.|..+.+||.++| +|+++|||++||
T Consensus 121 Gv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~~yG~~~d~~~~~~~~~~~~l~~~~vl~levVl~dG 200 (571)
T 1f0x_A 121 GTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPE 200 (571)
T ss_dssp TCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTTSCSSCCSCEEEEEECTTSCEEEEECSSBCCCSSHH
T ss_pred CcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCcccccCCCchhhhhhhheeccCCceEEEEeeeEEEEcCCC
Confidence 9999999999999975221122 34445689999999999999999999999 999999999999
Q ss_pred cEec-c-----------------cCCCc-----------------chhhhh--hccCCCceEEEEEEEEEEEecCceEEE
Q 036220 199 RILD-R-----------------EAMGE-----------------DFFWAI--RGGGGASFGVILAWKIKLVPVPATVTV 241 (522)
Q Consensus 199 ~~~~-~-----------------~~~~~-----------------dl~~a~--rg~~~g~~Givt~~~lk~~p~p~~~~~ 241 (522)
++++ . ...++ ||+|++ +||. |+||| |+++||++|.|+....
T Consensus 201 ~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~Gse-GtlGV-t~~tl~l~p~p~~~~~ 278 (571)
T 1f0x_A 201 QILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCA-GKLAV-FAVRLDTFEAEKNQQV 278 (571)
T ss_dssp HHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCT-TSSEE-EEEEEECEECCSSCEE
T ss_pred cEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCC-CceeE-EEEEEEEEecCCeEEE
Confidence 9885 2 11223 988888 9888 89999 9999999999987777
Q ss_pred EEEEechHHHHHHHHHHHH
Q 036220 242 FTVTKTLEQCATKLLHRWQ 260 (522)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (522)
+.+.++..+++.+++..+.
T Consensus 279 ~~~~~~~~~~a~~~~~~~~ 297 (571)
T 1f0x_A 279 FYIGTNQPEVLTEIRRHIL 297 (571)
T ss_dssp EEEEESCHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHH
Confidence 7777765455555555444
No 23
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.93 E-value=6.4e-26 Score=227.89 Aligned_cols=164 Identities=17% Similarity=0.162 Sum_probs=134.8
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCc
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~ 138 (522)
....|.+++.|+|++||+++|++|+++++|+.++|+|||+...... .++++|||++|++|++| +.+|+|+||++
T Consensus 51 igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~----~~gvvI~l~~~~~I~~d--~~~v~v~aG~~ 124 (322)
T 3tx1_A 51 TGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGG----IRGVILHLDLLQTIERN--NTQIVAMSGAK 124 (322)
T ss_dssp CCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTC----EEEEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCC----CCeEEEECCCCCcEEEC--CCEEEEecCcC
Confidence 4468999999999999999999999999999999999998743222 35899999999999886 45999999999
Q ss_pred HHHHHHHHHhcCC-cceecCCCCCCccchhhhhCCCCCCccccc-CccccceeEEEEEccCCcEecccCCCcchhhhhhc
Q 036220 139 IGEVYYRISEKSK-THGFPAGLCTSLGVGGHITGGAYGSMMRKY-GLGADNVVDARIVDASGRILDREAMGEDFFWAIRG 216 (522)
Q Consensus 139 ~~~l~~~l~~~g~-~~~~~~g~~~~vgigG~~~ggg~g~~~~~~-G~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rg 216 (522)
|.+|++++.++|+ ++.+..|.+.+ |||.+..++.| | |.++|+|++++||++||++++.. ++|++|+||+
T Consensus 125 ~~~l~~~l~~~Gl~Gle~~~giPgT--VGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~i~~~~--~~~~~~~yR~ 195 (322)
T 3tx1_A 125 LIDTAKFALNESLSGLEFACGIPGS--IGGALHMNAGA-----YGGEISDVLEAATVLTQTGELKKLK--RSELKAAYRF 195 (322)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCSB--HHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEE--GGGCC--CC-
T ss_pred HHHHHHHHHHcCCcccccCCCCcch--hHHHHHhCccC-----cccchHhhEEEEEEEcCCCCEEEec--hHHcCcchhh
Confidence 9999999999987 56678888765 55666543322 4 78999999999999999999744 3599999998
Q ss_pred cCCC-ceEEEEEEEEEEEecCc
Q 036220 217 GGGA-SFGVILAWKIKLVPVPA 237 (522)
Q Consensus 217 ~~~g-~~Givt~~~lk~~p~p~ 237 (522)
+..+ ++||||+++||++|.|+
T Consensus 196 s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 196 STIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp CTTTGGGCEEEEEEEECEECCH
T ss_pred cccCCCCEEEEEEEEEEEeCCH
Confidence 7644 57899999999999873
No 24
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.92 E-value=1.7e-25 Score=227.04 Aligned_cols=165 Identities=14% Similarity=0.017 Sum_probs=141.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeC--CCCEEEEcCC
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDI--DDNSAWVQAG 136 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~--~~~~v~v~aG 136 (522)
....|.+++.|+|++||+++|++|+++++|+.++|+|||..+... . +|+||+++ |++|++++ ++.+|+|+||
T Consensus 27 igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~-~----~GvVI~l~-~~~i~v~~~~~~~~v~v~AG 100 (357)
T 3i99_A 27 IEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH-Y----TGMIVVNR-LNGIEHQQDDDYHRLHVAGG 100 (357)
T ss_dssp CSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC-E----EEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC-C----CeEEEEcC-CCceEEeccCCceEEEEeCC
Confidence 446789999999999999999999999999999999999874332 2 58999998 99998854 4568999999
Q ss_pred CcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCc-cccceeEEEEEcc-CCcEecccCCCcchhhhh
Q 036220 137 ATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGL-GADNVVDARIVDA-SGRILDREAMGEDFFWAI 214 (522)
Q Consensus 137 ~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~dl~~a~ 214 (522)
++|.+|.+++.++|+ .|.+..+||+|.+ ||+.+++.+.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 101 ~~~~~l~~~a~~~Gl-----~GlE~l~gIPGtV-GGav~~NaGaYG~e~~d~v~~vevv~~~~G~i~~~~--~~dl~f~Y 172 (357)
T 3i99_A 101 EDWPSLVSWCVEQGI-----GGLENLALIPGCA-GSAPIQNIGAYGVEFKDVCDYVEYLCLETGTVKRLT--MEECQFGY 172 (357)
T ss_dssp SBHHHHHHHHHHTTC-----TTCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGCCBT
T ss_pred CcHHHHHHHHHHcCC-----cCccccCCCCchh-HHHHHhchhhhhhhHHhhEeEEEEEECCCCcEEEEe--HHHcCccc
Confidence 999999999999985 4666667777754 8899999999997 8999999999999 89999754 35999999
Q ss_pred hccCC----CceEEEEEEEEEEEecCc
Q 036220 215 RGGGG----ASFGVILAWKIKLVPVPA 237 (522)
Q Consensus 215 rg~~~----g~~Givt~~~lk~~p~p~ 237 (522)
|++.. +++||||+++||++|.++
T Consensus 173 R~s~~~~~~g~~gIIt~v~f~L~p~~~ 199 (357)
T 3i99_A 173 RDSIFKHQLYQKAVVTAVGLKFAKAWQ 199 (357)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred ccccCCCccCCCEEEEEEEEEEEeCCc
Confidence 98754 379999999999999764
No 25
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.92 E-value=7.5e-25 Score=221.48 Aligned_cols=160 Identities=21% Similarity=0.209 Sum_probs=134.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEEEcCCCc
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~v~aG~~ 138 (522)
....|.+|++|+|++||+++|++|+++++|+.++|||||+.+..... ++++|||++||+|++| +.+++||||++
T Consensus 45 ~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~----~gvvI~l~~m~~i~id--~~~v~v~aGv~ 118 (326)
T 1hsk_A 45 TGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI----RGIVISLLSLDHIEVS--DDAIIAGSGAA 118 (326)
T ss_dssp CCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE----EEEEEECTTCCCEEEE--TTEEEEETTSB
T ss_pred cCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC----CeEEEEeCCCCceEEc--CCEEEEeCCCc
Confidence 34589999999999999999999999999999999999987544322 5899999999999887 36999999999
Q ss_pred HHHHHHHHHhcCC-cceecCCCCCCccchhhhhCCCCCCcccccC-ccccceeEEEEEccCCcEecccCCCcchhhhhhc
Q 036220 139 IGEVYYRISEKSK-THGFPAGLCTSLGVGGHITGGAYGSMMRKYG-LGADNVVDARIVDASGRILDREAMGEDFFWAIRG 216 (522)
Q Consensus 139 ~~~l~~~l~~~g~-~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dl~~a~rg 216 (522)
+.+|++++.++|+ ++.+.++.++ +|||.+.+++.| || .++|+|++++||++||++++.... |++|+||.
T Consensus 119 ~~~l~~~l~~~Gl~gLe~~~~~Pg--tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~i~~~~~~--~~~~gyr~ 189 (326)
T 1hsk_A 119 IIDVSRVARDYALTGLEFACGIPG--SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGSLIKLTTK--ELELDYRN 189 (326)
T ss_dssp HHHHHHHHHHTTEESCGGGTTCCS--BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSCEEEEETT--TTTCBTTB
T ss_pred HHHHHHHHHHCCCccccccCCCcc--hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCCEEEEChH--HcCCCccc
Confidence 9999999999986 4545566554 588888765544 88 999999999999999999874432 88999997
Q ss_pred cC---CCceEEEEEEEEEEEec
Q 036220 217 GG---GASFGVILAWKIKLVPV 235 (522)
Q Consensus 217 ~~---~g~~Givt~~~lk~~p~ 235 (522)
+. +| ||||+++||++|.
T Consensus 190 ~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 190 SIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp CHHHHTT--CEEEEEEEECEEC
T ss_pred cccCCCC--EEEEEEEEEEEcC
Confidence 42 13 9999999999997
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.91 E-value=6.1e-24 Score=215.08 Aligned_cols=165 Identities=14% Similarity=0.053 Sum_probs=139.9
Q ss_pred CCCCceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeE-EeCCC-CEEEEcCC
Q 036220 59 SMPKPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVK-VDIDD-NSAWVQAG 136 (522)
Q Consensus 59 ~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~-~d~~~-~~v~v~aG 136 (522)
....|.+++.|+|++||+++|++|+++++|+.++|||||...... .+|+||+|+ |++|. ++.++ .+++|+||
T Consensus 11 igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-----~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 11 IDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-----YRGTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp CCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-----EEEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-----CCeEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 345799999999999999999999999999999999999874332 258999996 99984 56565 68999999
Q ss_pred CcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCc-cccceeEEEEEcc-CCcEecccCCCcchhhhh
Q 036220 137 ATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGL-GADNVVDARIVDA-SGRILDREAMGEDFFWAI 214 (522)
Q Consensus 137 ~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~-~~d~v~~~~vv~~-~G~~~~~~~~~~dl~~a~ 214 (522)
++|.+|.+++.++|+ .|.+..+||+|.+ ||+..++.+.||. ++|+|+++++|++ +|++++.. +.|++|+|
T Consensus 85 ~~~~~l~~~~~~~Gl-----~Gle~~~gIPGtV-GGa~~~NaGayG~ei~d~v~~v~vv~~~~G~v~~~~--~~d~~~gY 156 (340)
T 1uxy_A 85 ENWHRLVKYTLQEGM-----PGLENLALIPGCV-GSSPIQNIGAYGVELQRVCAYVDSVELATGKQVRLT--AKECRFGY 156 (340)
T ss_dssp SBHHHHHHHHHHTTC-----CSCGGGTTCCSBG-GGTTTTTCEETTEEGGGTEEEEEEEETTTTEEEEEE--TGGGTCBT
T ss_pred CCHHHHHHHHHHCCC-----CccccccCCccch-hHHHHhccccchhhHHhheeEEEEEECCCCcEEEEe--HHHhcccc
Confidence 999999999999985 4556666777744 8899999999995 8999999999996 99998744 35999999
Q ss_pred hccCC----CceEEEEEEEEEEEecCc
Q 036220 215 RGGGG----ASFGVILAWKIKLVPVPA 237 (522)
Q Consensus 215 rg~~~----g~~Givt~~~lk~~p~p~ 237 (522)
|++.. +++||||+++||+.|.+.
T Consensus 157 R~s~~~~~~~~~gIVt~v~~~L~~~~~ 183 (340)
T 1uxy_A 157 RDSIFKHEYQDRFAIVAVGLRLPKEWQ 183 (340)
T ss_dssp TBCGGGTTTTTTEEEEEEEEEEESSCC
T ss_pred CcCccCCcCCCCEEEEEEEEEEEcCCC
Confidence 98742 359999999999999764
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.87 E-value=5.9e-23 Score=200.79 Aligned_cols=159 Identities=18% Similarity=0.188 Sum_probs=128.0
Q ss_pred ccCCCCCC-CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCeEEeCCCCEEE
Q 036220 54 RYLVPSMP-KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSVKVDIDDNSAW 132 (522)
Q Consensus 54 r~~~~~~~-~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i~~d~~~~~v~ 132 (522)
+|+..... .|. ++.|+|++||+++| ++|+.++|+|||+.+...+. .+++||+|++|++|++|. +
T Consensus 13 ~~tt~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~---~~GvVI~l~~~~~I~vd~-----~ 77 (268)
T 2gqt_A 13 DYTTLGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGV---PERVIRLAGEFQTYDLKG-----W 77 (268)
T ss_dssp GGSSSCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCC---SSEEEEECGGGGCBCTTS-----E
T ss_pred HhcccccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCc---CCeEEEEcCCCCCcEEcC-----E
Confidence 34443333 455 99999999999999 89999999999987533322 238999999999998752 9
Q ss_pred EcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccC-ccccceeEEEEEccCCcEecccCCCcchh
Q 036220 133 VQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYG-LGADNVVDARIVDASGRILDREAMGEDFF 211 (522)
Q Consensus 133 v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G-~~~d~v~~~~vv~~~G~~~~~~~~~~dl~ 211 (522)
|+||++|.+|.+++.++|+ .|.+..++|+|. .||+..++++.|| .++|+|++++|| +||++++... .|++
T Consensus 78 v~aG~~~~~l~~~~~~~Gl-----~Gle~~~giPGt-vGGav~~NaGayG~e~~d~v~~v~vv-~~G~v~~~~~--~~l~ 148 (268)
T 2gqt_A 78 VGAGTLLPLLVQEAARAGL-----SGLEGLLGIPAQ-VGGAVKMNAGTRFGEMADALEAVEVF-HDGAFHVYCP--EELG 148 (268)
T ss_dssp EETTSBHHHHHHHHHHTTE-----ESCGGGTTCCCB-HHHHHHTTCEETTEEGGGGEEEEEEE-ETTEEEEECG--GGSC
T ss_pred EECCCCHHHHHHHHHHcCC-----cCCccccCccch-hHHHHHhccccCchhHHhheeEEEEE-CCCcEEEEch--HHcc
Confidence 9999999999999999975 355666677764 4777888889999 689999999999 9999997443 4899
Q ss_pred hhhhccCCCceEEEEEEEEEEEecC
Q 036220 212 WAIRGGGGASFGVILAWKIKLVPVP 236 (522)
Q Consensus 212 ~a~rg~~~g~~Givt~~~lk~~p~p 236 (522)
|+||++....-||||+++||++|.+
T Consensus 149 ~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 149 FGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp CBTTBCCCSTTCEEEEEEECCEECC
T ss_pred cccCCCCcCCCceEEEEEEEEEeCC
Confidence 9999876322249999999999974
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.79 E-value=2.7e-19 Score=169.91 Aligned_cols=118 Identities=19% Similarity=0.225 Sum_probs=100.0
Q ss_pred eEEeCCCCEEEEcCCCcHHHHHHHHHhcCCcceecCCCCCCccchhhhhCCCCCCcccccCccccceeEEEEEccCCcEe
Q 036220 122 VKVDIDDNSAWVQAGATIGEVYYRISEKSKTHGFPAGLCTSLGVGGHITGGAYGSMMRKYGLGADNVVDARIVDASGRIL 201 (522)
Q Consensus 122 i~~d~~~~~v~v~aG~~~~~l~~~l~~~g~~~~~~~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~~~~vv~~~G~~~ 201 (522)
|++|+++.+|+|+||+++.+|++++.++|+.+...+|.++. +|||++++|++| .+||.. |+|++++||++||+++
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~-tVGG~v~~nagG---~~yG~~-D~V~~vevV~~dG~i~ 75 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPG-GVGGLVARGGFA---QTFFFP-AEVLGLTFRTPKGRRV 75 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTT-HHHHHHHTTCSS---BSSCGG-GGEEEEEEECTTSCEE
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCC-chhheeccCccc---ccCCCc-cEEEEEEEEeCCCCEE
Confidence 47899999999999999999999999987543333455565 999999999998 899999 9999999999999998
Q ss_pred c-cc-----CCCcchhhhhhccCCCceEEEEEEEEEEEecCceEEEEEEE
Q 036220 202 D-RE-----AMGEDFFWAIRGGGGASFGVILAWKIKLVPVPATVTVFTVT 245 (522)
Q Consensus 202 ~-~~-----~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~p~~~~~~~~~ 245 (522)
+ .. ..++||||+++|+. |+|||||+++||++|.|+....+.+.
T Consensus 76 ~~~~~~~kn~~gydl~~~~~Gs~-G~lGIVt~~tlrl~p~~~~~~~~~~~ 124 (219)
T 2yvs_A 76 RAGGVVVKNVQGYDLVRLFVGSF-GLLGRAEEVVLRLRPGRAQAFLRRPF 124 (219)
T ss_dssp EEECSSCSSSSCSCHHHHHTTCT-TTTCEEEEEEEECEECSEEEEEEEEC
T ss_pred EECCccccCCCCcchHHHhccCC-CceEEEEEEEEEEEECCcccEEEEEe
Confidence 6 21 24589999999887 89999999999999998866554443
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.42 E-value=5.6e-07 Score=88.83 Aligned_cols=156 Identities=16% Similarity=0.152 Sum_probs=103.2
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAK---LRSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~---l~~i~~d~~~~~v~v~aG~~ 138 (522)
.+-.++.|+|.+|+.++++. ++.+..+.|||+|....- .......+++||+++ |+.|+.+ +..+++|+|++
T Consensus 4 ~~~~~~~P~s~~ea~~ll~~---~~~~~~ilaGGT~ll~~~-~~~~~~~~~lIdl~~i~eL~~i~~~--~~~l~iGA~~t 77 (287)
T 1ffv_C 4 PRFEYHAPKSVGEAVALLGQ---LGSDAKLLAGGHSLLPMM-KLRFAQPEHLIDINRIPELRGIREE--GSTVVIGAMTV 77 (287)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGCCEEEE--TTEEEEETTCB
T ss_pred CcceEECCCCHHHHHHHHHh---cCCCCEEEECchHHHHHH-hcCCCCCCEEEECCCChhhcceEec--CCEEEEccCCc
Confidence 45568999999999999875 346899999999964210 011122579999984 6777764 45799999999
Q ss_pred HHHHHHH-HHhcCC-ccee----cCCC--CCCccchhhhhCCCCCCcccccCcccccee-------EEEEEccCCcEecc
Q 036220 139 IGEVYYR-ISEKSK-THGF----PAGL--CTSLGVGGHITGGAYGSMMRKYGLGADNVV-------DARIVDASGRILDR 203 (522)
Q Consensus 139 ~~~l~~~-l~~~g~-~~~~----~~g~--~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~~~ 203 (522)
+.+|.+. +.++++ +|.. ..|. -+..+|||.+..+.. ..|.+. .+++..++| .++.
T Consensus 78 l~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~---------~~D~~~~l~Al~A~v~~~~~~G-~r~i 147 (287)
T 1ffv_C 78 ENDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDP---------GNDHPALSIAVEAHFVLEGPNG-RRTV 147 (287)
T ss_dssp HHHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCT---------TCSHHHHHHHTTCEEEEEETTE-EEEE
T ss_pred HHHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCC---------cHHHHHHHHHcCcEEEEEcCCc-eEEE
Confidence 9999963 333333 2221 1221 113578999987642 345543 588899999 3433
Q ss_pred cCCCcchhhhhhccCCCceEEEEEEEEEEEec
Q 036220 204 EAMGEDFFWAIRGGGGASFGVILAWKIKLVPV 235 (522)
Q Consensus 204 ~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p~ 235 (522)
+. .|+|+++|-.....-.|||+++|.+.+.
T Consensus 148 ~~--~df~~g~~~t~l~~~eii~~i~ip~~~~ 177 (287)
T 1ffv_C 148 PA--DGFFLGTYMTLLEENEVMVEIRVPAFAQ 177 (287)
T ss_dssp ES--TTTEEETTEESCCTTCEEEEEEEECCCT
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 32 3899888743323336999999987653
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.74 E-value=0.00012 Score=72.10 Aligned_cols=155 Identities=19% Similarity=0.150 Sum_probs=96.6
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAK---LRSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~---l~~i~~d~~~~~v~v~aG~~ 138 (522)
.+-.++.|+|.+|+.++++. ++-+..+.+||++....- .........+||+++ |+.|+. +++.+++||+++
T Consensus 4 ~~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~-k~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~~t 77 (288)
T 1n62_C 4 GSFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIM-KTRLATPEHLVDLRDIGDLVGIRE--EGTDVVIGAMTT 77 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHH-HTTSCCCSEEEECTTCGGGSCEEE--ETTEEEEETTCB
T ss_pred CceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHH-hcCCCCCCEEEECCCChhhcceEe--cCCEEEEccCCc
Confidence 45568999999999998863 344689999999954210 000012469999986 566765 455899999999
Q ss_pred HHHHHH--HHHhcCCcceecCCCC------CCccchhhhhCCCCCCcccccCcccccee-------EEEEEccCCcEecc
Q 036220 139 IGEVYY--RISEKSKTHGFPAGLC------TSLGVGGHITGGAYGSMMRKYGLGADNVV-------DARIVDASGRILDR 203 (522)
Q Consensus 139 ~~~l~~--~l~~~g~~~~~~~g~~------~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~~~ 203 (522)
+.+|.+ .+.++-..|.-..... +..+|||.+..+. ...|.+. .+++..++|+ .+.
T Consensus 78 ~~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~---------p~sD~~~~L~Al~A~v~l~~~~G~-r~v 147 (288)
T 1n62_C 78 QHALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGD---------PGNDMPALMQCLGAAYELTGPEGA-RIV 147 (288)
T ss_dssp HHHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCC---------TTCSHHHHHHHHTCEEEEEETTEE-EEE
T ss_pred HHHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCC---------CchHHHHHHHHhCcEEEEEeCCcc-EEE
Confidence 999995 4444210111101111 1247899998762 2456554 6677788884 322
Q ss_pred cCCCcchhhhhhccCCCceEEEEEEEEEEEe
Q 036220 204 EAMGEDFFWAIRGGGGASFGVILAWKIKLVP 234 (522)
Q Consensus 204 ~~~~~dl~~a~rg~~~g~~Givt~~~lk~~p 234 (522)
.- .|+|.+++-.....--|||++.|...+
T Consensus 148 ~~--~df~~g~~~t~l~~~eil~~i~ip~~~ 176 (288)
T 1n62_C 148 AA--RDYYQGAYFTAIEPGELLTAIRIPVPP 176 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEECCC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEeCCCC
Confidence 22 277777652221233689999987654
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.54 E-value=6.6e-05 Score=78.65 Aligned_cols=153 Identities=16% Similarity=0.127 Sum_probs=100.8
Q ss_pred EEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCC---CCCeEEeCCCCEEEEcCCCcHHH
Q 036220 65 FIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAK---LRSVKVDIDDNSAWVQAGATIGE 141 (522)
Q Consensus 65 ~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~---l~~i~~d~~~~~v~v~aG~~~~~ 141 (522)
.++.|+|.+|+.++++.. . +..+.+||++....-. .......++||+++ |+.|+.+ +..+++||++++.+
T Consensus 179 ~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k-~~~~~~~~lIdl~~i~eL~~I~~~--~~~l~IGA~vtl~~ 251 (462)
T 2w3s_A 179 PAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVT-KALRDLPEVAFLSHCKDLAQIRET--PDGYGIGAGVTIAA 251 (462)
T ss_dssp CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHH-TSCCCCCSEEECTTCGGGSCEEEE--TTEEEEETTCBHHH
T ss_pred EEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhh-ccCCCCCEEEEcCCChhhCcEEEc--CCEEEEccCCcHHH
Confidence 467899999999988652 2 5788999999763210 11113568999987 6778765 44799999999999
Q ss_pred HHHHHHhcCCc-c----eecCC--CCCCccchhhhhCCCCCCcccccCcccccee----EEEEEccCCcEecccCCCcch
Q 036220 142 VYYRISEKSKT-H----GFPAG--LCTSLGVGGHITGGAYGSMMRKYGLGADNVV----DARIVDASGRILDREAMGEDF 210 (522)
Q Consensus 142 l~~~l~~~g~~-~----~~~~g--~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~----~~~vv~~~G~~~~~~~~~~dl 210 (522)
|.+.+.+ .+. | ....+ .-+..+|||.+..+..+ +-...-++ .+++..++|+ ++.+- .|+
T Consensus 252 l~~~l~~-~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~------sD~~~~L~ALdA~v~l~~~~G~-R~vp~--~dF 321 (462)
T 2w3s_A 252 LRAFAEG-PHPALAGLLRRFASEQVRQVATIGGNIANGSPI------GDGPPALIAMGASLTLRRGQER-RRMPL--EDF 321 (462)
T ss_dssp HHHHHTT-TCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT------CSHHHHHHHTTCEEEEEBTTBC-CCCBG--GGG
T ss_pred HHHHHHH-HhHHHHHHHHHhCChhheeeEEcccccccCCCc------chHHHHHHHcCCEEEEEeCCce-EEEEH--HHh
Confidence 9988433 231 1 11111 11235799999887632 44555666 7888888884 33332 388
Q ss_pred hhhhhccCCCceEEEEEEEEEEEe
Q 036220 211 FWAIRGGGGASFGVILAWKIKLVP 234 (522)
Q Consensus 211 ~~a~rg~~~g~~Givt~~~lk~~p 234 (522)
|.++|-.....-.|||++.|...+
T Consensus 322 ~~g~~~t~L~~~Eii~~i~iP~~~ 345 (462)
T 2w3s_A 322 FLEYRKQDRRPGEFVESVTLPKSA 345 (462)
T ss_dssp EEETTEESCCTTCEEEEEEEESCC
T ss_pred hcccccccCCCCcEEEEEEEecCC
Confidence 888764322233699999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=96.84 E-value=0.003 Score=62.57 Aligned_cols=154 Identities=13% Similarity=0.012 Sum_probs=91.6
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKL---RSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l---~~i~~d~~~~~v~v~aG~~ 138 (522)
.+...+.|+|.+|+.++++. +. ...+.+||++....-.. +......+||++++ +.|+. +++.+++||+++
T Consensus 9 ~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~-~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 81 (305)
T 3nvz_B 9 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKF-KNQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 81 (305)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHH-SCCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhc-CCCCCCEEEECCCChhhcceEE--CCCeEEEccCCc
Confidence 45678999999999888753 22 36788999996421100 01124589999965 55655 456899999999
Q ss_pred HHHHHHHHHhc----C------C-cce----ecC--CCCCCccchhhhhCCCCCCcccccCccccce---e----EEEEE
Q 036220 139 IGEVYYRISEK----S------K-THG----FPA--GLCTSLGVGGHITGGAYGSMMRKYGLGADNV---V----DARIV 194 (522)
Q Consensus 139 ~~~l~~~l~~~----g------~-~~~----~~~--g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v---~----~~~vv 194 (522)
+.++.+.+.++ . . .|. ..+ -.-+..+|||.+..+.. ..|.. + .+++.
T Consensus 82 ~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p---------~sD~~~~L~AldA~v~l~ 152 (305)
T 3nvz_B 82 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASP---------ISDLNPVFMASGTKLTIV 152 (305)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCT---------TCSSHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCC---------chHHHHHHHHcCCEEEEE
Confidence 99999876532 0 0 000 001 11124578999977643 23432 2 56777
Q ss_pred ccCCcEecccCCCcchhhhhhccCCCceEEEEEEEEEEE
Q 036220 195 DASGRILDREAMGEDFFWAIRGGGGASFGVILAWKIKLV 233 (522)
Q Consensus 195 ~~~G~~~~~~~~~~dl~~a~rg~~~g~~Givt~~~lk~~ 233 (522)
.++|+....- ..|+|-+++--....--|||++.|...
T Consensus 153 ~~~G~R~vp~--~~df~~g~~~t~l~~~Eil~~I~iP~~ 189 (305)
T 3nvz_B 153 SRGTRRTVPM--DHTFFPSYRKTLLGPEEILLSIEIPYS 189 (305)
T ss_dssp ETTEEEEEEC--CGGGCCSTTCCSCCTTCEEEEEEEECC
T ss_pred cCCCcEEEEe--ehHhhcCcccccCCCCcEEEEEEecCC
Confidence 7888532211 115666554221122259999988643
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.61 E-value=0.0032 Score=61.76 Aligned_cols=153 Identities=16% Similarity=0.056 Sum_probs=91.7
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKL---RSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l---~~i~~d~~~~~v~v~aG~~ 138 (522)
.|-.++.|+|.+|+.++++. +-...+.+||++....-... ......+||++++ +.|+. +++.+++|++++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~-~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFR-LVYPSCLVDLRNVSELFEISQ--SAGILSVGAMVT 76 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTT-CCCCSEEEECTTCGGGGCEEE--ETTEEEEETTCB
T ss_pred CCceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcC-CCCCCEEEECCCChhhcCeEE--cCCEEEEcCCCc
Confidence 45568999999999998863 23467889999953111000 0113589999974 55655 456899999999
Q ss_pred HHHHHH--HHHhcCCcce-----ec-CCCCCCccchhhhhCCCCCCcccccCcccccee-------EEEEEccCCcEecc
Q 036220 139 IGEVYY--RISEKSKTHG-----FP-AGLCTSLGVGGHITGGAYGSMMRKYGLGADNVV-------DARIVDASGRILDR 203 (522)
Q Consensus 139 ~~~l~~--~l~~~g~~~~-----~~-~g~~~~vgigG~~~ggg~g~~~~~~G~~~d~v~-------~~~vv~~~G~~~~~ 203 (522)
+.+|.+ .+.++-..|. +. .-.-+..+|||.+..+- ...|... .+++..++|+...
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~---------p~sD~~~~L~Al~A~v~l~~~~g~R~v- 146 (288)
T 1t3q_C 77 HFRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHAD---------AGAEMPFLMATLGATMYIASSAGVRSV- 146 (288)
T ss_dssp HHHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTC---------TTCHHHHHHHHTTCEEEEEETTEEEEE-
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCC---------CcHHHHHHHHHcCcEEEEEcCCceEEE-
Confidence 999986 3433210110 00 01112347899987542 1356655 6777778885322
Q ss_pred cCCCcchhhhhhccCCCceEEEEEEEEEEE
Q 036220 204 EAMGEDFFWAIRGGGGASFGVILAWKIKLV 233 (522)
Q Consensus 204 ~~~~~dl~~a~rg~~~g~~Givt~~~lk~~ 233 (522)
.- .|+|.+++--....--|||++.|...
T Consensus 147 p~--~dF~~g~~~t~L~~~Eil~~I~iP~~ 174 (288)
T 1t3q_C 147 SA--TDFMKGHYFTDLEAGEVLVRVEIPIP 174 (288)
T ss_dssp EH--HHHEEETTEESCCTTCEEEEEEEECC
T ss_pred EH--HHHhcCcccccCCCCCEEEEEEecCC
Confidence 21 26666554211122368999988643
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=92.89 E-value=0.19 Score=49.30 Aligned_cols=152 Identities=16% Similarity=0.175 Sum_probs=85.1
Q ss_pred ceEEEecCCHHHHHHHHHHHHHcCC-eEEEEeCCCCCCCCcccCCCCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCc
Q 036220 63 PEFIFTPLYEAHVQAAVICCKELGV-HLRVRSGGHDYEGLSYVSETETPFIIVDLAKL---RSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 63 p~~vv~P~t~~dv~~~v~~a~~~~~-~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l---~~i~~d~~~~~v~v~aG~~ 138 (522)
|-.++.|+|.+|+.++++ +++- ...+.+||++....-. ........+||++++ +.|+. +++.+++||+++
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k-~~~~~~~~lIdl~~i~eL~~I~~--~~~~l~IGA~vt 76 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEIN-DRWEKPDVVIDIKKLKELEYIRV--EENTIHIGALST 76 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHH-TTSCCCSEEEECTTCGGGCCEEE--CSSEEEEETTCB
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhh-cCCCCCCeEEEcccChhhcceEE--cCCeEEEccCCc
Confidence 446789999999988764 3332 4678899999642110 000124589999975 55554 466899999999
Q ss_pred HHHHHHH--HHhcCCc-ce--ecC-C---CCCCccchhhhhCCCCCCcccccCccccce-----e--EEEEEccCCcEec
Q 036220 139 IGEVYYR--ISEKSKT-HG--FPA-G---LCTSLGVGGHITGGAYGSMMRKYGLGADNV-----V--DARIVDASGRILD 202 (522)
Q Consensus 139 ~~~l~~~--l~~~g~~-~~--~~~-g---~~~~vgigG~~~ggg~g~~~~~~G~~~d~v-----~--~~~vv~~~G~~~~ 202 (522)
+.++.+. +.++ .. |. ... + .-+..+|||.+..+.. ..|.. + .+++..++|+...
T Consensus 77 ~~~l~~~~~~~~~-~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p---------~sD~~~~LlAldA~v~l~~~~g~R~v 146 (296)
T 3hrd_C 77 FTQIENHPFIRSH-VRALYKAASQVGSPQIRNLGTIGGNLSTSSV---------AGDGVSAMTTLDATVVLESVRGTRQM 146 (296)
T ss_dssp HHHHHHCHHHHHH-CHHHHHHHHTSSCHHHHHHCBHHHHHHHTCT---------TCHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred HHHHHhChhhhhH-hHHHHHHHHHhCCHHHhcceehhhhhccCCC---------chHHHHHHHHhCcEEEEEcCCceEEE
Confidence 9999742 2221 10 00 000 1 1123579999975432 23432 2 3445556674222
Q ss_pred ccCCCcchhhhhh---ccCCCceEEEEEEEEEEE
Q 036220 203 REAMGEDFFWAIR---GGGGASFGVILAWKIKLV 233 (522)
Q Consensus 203 ~~~~~~dl~~a~r---g~~~g~~Givt~~~lk~~ 233 (522)
+-+ |+|-+.+ --....--|||++.|...
T Consensus 147 -p~~--dF~~g~~~~~~t~L~~~Eil~~I~iP~~ 177 (296)
T 3hrd_C 147 -KLT--DFFDGEGFKRRNALEADEIMTEVIIDRP 177 (296)
T ss_dssp -EHH--HHHHCCSSSSSSSCCTTCEEEEEEEECC
T ss_pred -EHH--HHhcccccccccCCCCCcEEEEEEecCC
Confidence 211 5554432 111122359999988543
No 35
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=92.65 E-value=0.071 Score=55.07 Aligned_cols=69 Identities=13% Similarity=0.236 Sum_probs=40.7
Q ss_pred EEEecCCCchhhhHHHHHHHHHHHhccccccCCCCceeccccCcccCCCCCCCcccccchhhhhhccccHHHHHHhhhhc
Q 036220 419 YVSTWQDGEKNATKHIDWIRRLYNYMGPYVSMLPRAAYVNYRDLDLGMNKNGSSFIKSSVWGYKYFKDNFNRLVKVKTKV 498 (522)
Q Consensus 419 ~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~Y~Ny~d~~~~~~~~~~~~~~~~~~~~~yyg~n~~RL~~IK~ky 498 (522)
+...|..+ .+...++++.+.+.+..+-+ .-|-.+ |.... .+.+. ..|+ +++++++||++|
T Consensus 346 l~~~~~~~---~~~~~~~~~~~~~lv~~~gG----~~~wgk-~~~~~----------~~~~~-~~Yp-~~~~f~~vk~~~ 405 (422)
T 2vfr_A 346 AHFTWVED---TAAVLPVVRRLEEALVPFAA----RPHWGK-VFTVP----------AGELR-ALYP-RLADFGALAGAL 405 (422)
T ss_dssp EEEEECSC---HHHHHHHHHHHHHHHGGGTC----EECTTS-CCCCC----------HHHHH-TTCT-THHHHHHHHHHH
T ss_pred EEEecCCC---chhHHHHHHHHHHHHHHcCC----cccccc-cCCCC----------HHHHH-HHCc-CHHHHHHHHHHh
Confidence 34446522 34455677777776666521 112222 22211 11233 4456 899999999999
Q ss_pred CCCCccccC
Q 036220 499 DPDNFFRHE 507 (522)
Q Consensus 499 DP~~vF~~~ 507 (522)
||+|+|++.
T Consensus 406 DP~g~f~n~ 414 (422)
T 2vfr_A 406 DPAGKFTNA 414 (422)
T ss_dssp CTTCTTCCH
T ss_pred CCCCccCCH
Confidence 999999864
No 36
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=89.74 E-value=0.65 Score=45.96 Aligned_cols=77 Identities=19% Similarity=0.121 Sum_probs=52.9
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKL---RSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l---~~i~~d~~~~~v~v~aG~~ 138 (522)
.|-.++.|+|.+|+.++++. -.-.+.+||+++...-. ........+||++++ +.|+.++ ++.+++||+++
T Consensus 5 ~~f~y~~P~sl~ea~~ll~~-----~~a~~lAGGT~l~~~~k-~~~~~p~~lIdi~~i~eL~~I~~~~-~~~l~IGA~vt 77 (324)
T 1rm6_B 5 TDFRTHRPATLADAVNALAA-----EATLPLGAGTDLLPNLR-RGLGHPAALVDLTGIDGLATISTLA-DGSLRIGAGAT 77 (324)
T ss_dssp CCCEEECCSSHHHHHHHTTS-----TTEEEESSCTTHHHHHH-TTSCCCSEEEECTTSTTTTCEEECT-TSCEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhC-----CCCEEEECchhHHHHHh-ccCCCCCEEEECCCChhhcceEECC-CCeEEEccCCc
Confidence 34457899999999988762 24788899998632100 000124589999875 5566543 34699999999
Q ss_pred HHHHHHH
Q 036220 139 IGEVYYR 145 (522)
Q Consensus 139 ~~~l~~~ 145 (522)
+.+|.+.
T Consensus 78 ~~~l~~~ 84 (324)
T 1rm6_B 78 LEAIAEH 84 (324)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999864
No 37
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=88.92 E-value=0.64 Score=50.77 Aligned_cols=29 Identities=34% Similarity=0.511 Sum_probs=25.0
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCCCCcccc
Q 036220 478 VWGYKYFK-DNFNRLVKVKTKVDPDNFFRH 506 (522)
Q Consensus 478 ~~~~~yyg-~n~~RL~~IK~kyDP~~vF~~ 506 (522)
.|...+|| ..++.|++||+.|||+|+|+-
T Consensus 625 ~~l~~~~g~~~l~lmr~IK~a~DP~gILNP 654 (658)
T 4bby_A 625 QWLKESISDVGFGMLKSVKDYVDPTNIFGN 654 (658)
T ss_dssp GGHHHHHCHHHHHHHHHHHHHHSTTCSSCS
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCcccCCCC
Confidence 57777887 479999999999999999974
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=86.39 E-value=0.93 Score=47.98 Aligned_cols=33 Identities=18% Similarity=0.086 Sum_probs=25.2
Q ss_pred hhhhhcccc-HHHHHHhhhhcCCCCccccCCCCC
Q 036220 479 WGYKYFKDN-FNRLVKVKTKVDPDNFFRHEQSIP 511 (522)
Q Consensus 479 ~~~~yyg~n-~~RL~~IK~kyDP~~vF~~~q~i~ 511 (522)
|...+||++ ++-+++||+.+||+|+|+-..-+.
T Consensus 481 ~~~~~~g~~~~~lmr~IK~a~DP~~IlNPGki~~ 514 (520)
T 1wvf_A 481 RVAQSYGPVKRKLEHAIKRAVDPNNILAPGRSGI 514 (520)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCCBCTTGGGC
T ss_pred hhhhhcCHHHHHHHHHHHHHcCCCCCCCCCcCCC
Confidence 447788876 566699999999999998654443
No 39
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=73.64 E-value=4.2 Score=47.86 Aligned_cols=79 Identities=8% Similarity=-0.071 Sum_probs=54.1
Q ss_pred CceEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCC---CCeEEeCCCCEEEEcCCCc
Q 036220 62 KPEFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKL---RSVKVDIDDNSAWVQAGAT 138 (522)
Q Consensus 62 ~p~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l---~~i~~d~~~~~v~v~aG~~ 138 (522)
.+...++|.|.+|+.++++. +. .-.+.+||++..-.-... ......+||++++ +.|+. ++..+++||+++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~~~k~~-~~~~~~lIdl~~i~EL~~I~~--~~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFK-NQLFPMIICPAWIPELNAVEH--GPEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHS-CCCCSEEEECTTCGGGGCEEE--CSSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHHHhhcC-CCCCCeEEEcCCCHHhCceEE--eCCEEEEEecCh
Confidence 45568999999999887753 21 346778998854211100 0113479999975 45555 456799999999
Q ss_pred HHHHHHHHH
Q 036220 139 IGEVYYRIS 147 (522)
Q Consensus 139 ~~~l~~~l~ 147 (522)
+.+|.+.+.
T Consensus 305 l~~l~~~l~ 313 (1332)
T 3unc_A 305 LSSVEKTLL 313 (1332)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998764
No 40
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=66.98 E-value=26 Score=36.41 Aligned_cols=28 Identities=25% Similarity=0.492 Sum_probs=23.2
Q ss_pred hhhhhhccccHHHHHHhhhhcCCCCccccC
Q 036220 478 VWGYKYFKDNFNRLVKVKTKVDPDNFFRHE 507 (522)
Q Consensus 478 ~~~~~yyg~n~~RL~~IK~kyDP~~vF~~~ 507 (522)
.+...| .++++.++||+++||+++|.+.
T Consensus 446 ~~~~~Y--P~~~~F~~lr~~~DP~g~F~n~ 473 (481)
T 4feh_A 446 TFHAMY--PRVDEWISVRRKVDPLRVFASD 473 (481)
T ss_dssp HHHHHC--TTHHHHHHHHHHHCTTCCBCCH
T ss_pred HHHHhC--cCHHHHHHHHHhhCCccccCCH
Confidence 455444 7899999999999999999764
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=64.05 E-value=7.9 Score=41.18 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=20.9
Q ss_pred ccHHHHHHhhhhcCCCCccccCCCC
Q 036220 486 DNFNRLVKVKTKVDPDNFFRHEQSI 510 (522)
Q Consensus 486 ~n~~RL~~IK~kyDP~~vF~~~q~i 510 (522)
..++-+++||+.+||+|+|+-..-+
T Consensus 523 ~~~~lm~~iK~~~DP~gILNPGk~~ 547 (560)
T 1e8g_A 523 SFLRFNEVLKNAVDPNGIIAPGKSG 547 (560)
T ss_dssp HHHHHHHHHHHHHCTTCCBCTTGGG
T ss_pred HHHHHHHHHHHHcCccCCCCCCccc
Confidence 4688899999999999999865444
No 42
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=53.79 E-value=14 Score=39.41 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=18.9
Q ss_pred hhhhhhcc-ccHHHHHHhhhhcCCCCcccc
Q 036220 478 VWGYKYFK-DNFNRLVKVKTKVDPDNFFRH 506 (522)
Q Consensus 478 ~~~~~yyg-~n~~RL~~IK~kyDP~~vF~~ 506 (522)
.|....+| ..++=+++||+.+||+|+|+-
T Consensus 551 ~~l~~~~g~~~~~lmr~iK~a~DP~gIlNP 580 (584)
T 2uuu_A 551 PWMTRYATRGWINVYRSLKETIDPKDICNP 580 (584)
T ss_dssp --------CTHHHHHHHHHHHHCTTCCBSC
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCCCcCCCC
Confidence 46666676 468999999999999999974
No 43
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=50.11 E-value=6.3 Score=41.94 Aligned_cols=22 Identities=18% Similarity=0.453 Sum_probs=20.6
Q ss_pred ccHHHHHHhhhhcCCCCccccC
Q 036220 486 DNFNRLVKVKTKVDPDNFFRHE 507 (522)
Q Consensus 486 ~n~~RL~~IK~kyDP~~vF~~~ 507 (522)
.++++.+++|+++||+++|.+.
T Consensus 533 p~~~~f~~~r~~~DP~g~F~n~ 554 (561)
T 2i0k_A 533 ENWDTARARYNQIDPHRVFTNG 554 (561)
T ss_dssp SSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCHHHHHHHHHhcCCCCccCCH
Confidence 8999999999999999999865
No 44
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=44.77 E-value=12 Score=39.79 Aligned_cols=32 Identities=19% Similarity=0.101 Sum_probs=23.9
Q ss_pred ccccHHHHHHhhhhcCCCCccccCCCCCCCCCc
Q 036220 484 FKDNFNRLVKVKTKVDPDNFFRHEQSIPPLPLC 516 (522)
Q Consensus 484 yg~n~~RL~~IK~kyDP~~vF~~~q~i~~~~~~ 516 (522)
|++... |++||+++||.|+|+-...+.|-..+
T Consensus 535 ~~~~~~-m~~iK~~~DP~~ilNPGk~~t~~~~~ 566 (571)
T 1f0x_A 535 YKAPET-LQKFYRENDPTNSMNPGIGKTSKRKN 566 (571)
T ss_dssp SCCCHH-HHHHHHHHCTTCCBSTTTTTCCCSSC
T ss_pred cCCHHH-HHHHHHHhCCCCCCCCCcCcCCcccc
Confidence 344444 99999999999999877766664433
No 45
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=40.82 E-value=10 Score=40.12 Aligned_cols=23 Identities=17% Similarity=0.291 Sum_probs=21.2
Q ss_pred cccHHHHHHhhhhcCCCCccccC
Q 036220 485 KDNFNRLVKVKTKVDPDNFFRHE 507 (522)
Q Consensus 485 g~n~~RL~~IK~kyDP~~vF~~~ 507 (522)
|+|++.-++++.++||+++|.++
T Consensus 511 ~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 511 AANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp GGSHHHHHHHHHHHCTTCCSCCH
T ss_pred CCCHHHHHHHHHhcCCCcccCCH
Confidence 68999999999999999999764
No 46
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=35.58 E-value=25 Score=41.42 Aligned_cols=80 Identities=11% Similarity=0.033 Sum_probs=49.4
Q ss_pred eEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCcccCCCCCCeEEEEcCCCCCe-EEeCCCCEEEEcCCCcHHHH
Q 036220 64 EFIFTPLYEAHVQAAVICCKELGVHLRVRSGGHDYEGLSYVSETETPFIIVDLAKLRSV-KVDIDDNSAWVQAGATIGEV 142 (522)
Q Consensus 64 ~~vv~P~t~~dv~~~v~~a~~~~~~v~~~ggGh~~~~~~~~~d~~~~givIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l 142 (522)
...+.|.|.+|+.++...- -+-+ +..|++...-.-...+ ..-.++|++.+...+ .+..++..+++||+|++.++
T Consensus 241 ~~w~~P~tl~el~~l~~~~--p~a~--lvaGnT~~gl~~~~~~-~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKH--PSAP--LVIGNTYLGLHMKFTD-VSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHC--TTSC--BCSSCTTHHHHHC--C-CCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred ceEecCCCHHHHHHHHHHC--CCCe--EEEecccceeeEeecC-CCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 3468999999998875421 1233 4456665321000111 113488998864443 34445668999999999999
Q ss_pred HHHHHh
Q 036220 143 YYRISE 148 (522)
Q Consensus 143 ~~~l~~ 148 (522)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887764
No 47
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=32.15 E-value=76 Score=26.12 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=32.3
Q ss_pred CCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 036220 60 MPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGHD 97 (522)
Q Consensus 60 ~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 97 (522)
...|..|+++.+++++.++.+.|.+.|+|. .++=.|+.
T Consensus 53 ~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 53 EGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 468899999999999999999999999986 45566663
No 48
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=31.80 E-value=78 Score=25.95 Aligned_cols=42 Identities=10% Similarity=0.190 Sum_probs=34.3
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGHD 97 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 97 (522)
+|.. ...|..|+.+.+++++.++.+.|++.|+|. .++=.|+.
T Consensus 48 ~W~~--~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 90 (120)
T 1xty_A 48 EWLH--QGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKT 90 (120)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSSS
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 5643 468999999999999999999999999996 45556653
No 49
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=31.45 E-value=75 Score=25.87 Aligned_cols=42 Identities=14% Similarity=0.197 Sum_probs=32.7
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGHD 97 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 97 (522)
+|. ....|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 43 ~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~T 85 (115)
T 2zv3_A 43 EWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGHT 85 (115)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC--
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCce
Confidence 464 3568999999999999999999999999986 45555553
No 50
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=30.85 E-value=76 Score=25.89 Aligned_cols=42 Identities=7% Similarity=0.071 Sum_probs=34.0
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGHD 97 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 97 (522)
+|. ....|..|+.+.+++++.++.+.|++.|+|. .++-.|+.
T Consensus 45 ~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 45 EWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 464 3468999999999999999999999999986 45556553
No 51
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=28.97 E-value=69 Score=26.52 Aligned_cols=42 Identities=12% Similarity=0.130 Sum_probs=33.8
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCCC
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGHD 97 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh~ 97 (522)
+|.. ...+..|+.+.+++++.++.+.|++.|+|. .|+-.|+.
T Consensus 42 ~W~~--~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 42 KWLD--EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HTGG--GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 4632 347899999999999999999999999986 45566654
No 52
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=24.95 E-value=1.3e+02 Score=24.44 Aligned_cols=41 Identities=17% Similarity=0.314 Sum_probs=33.1
Q ss_pred ccCCCCCCCceEEEecCCHHHHHHHHHHHHHcCCeE-EEEeCCC
Q 036220 54 RYLVPSMPKPEFIFTPLYEAHVQAAVICCKELGVHL-RVRSGGH 96 (522)
Q Consensus 54 r~~~~~~~~p~~vv~P~t~~dv~~~v~~a~~~~~~v-~~~ggGh 96 (522)
+|.. ...|..+++..+++++.++.+.|.+.|+|. .++=.|+
T Consensus 45 ~W~~--~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 45 QWEY--CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp HHHH--TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred HHHh--CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 4643 346899999999999999999999999985 4555665
Done!