Query 036222
Match_columns 298
No_of_seqs 175 out of 1407
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 10:39:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036222.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036222hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 5E-41 1.1E-45 319.5 21.6 222 68-295 123-349 (371)
2 PRK14296 chaperone protein Dna 100.0 6.5E-39 1.4E-43 309.3 23.7 227 68-296 130-361 (372)
3 PRK14288 chaperone protein Dna 100.0 5.5E-39 1.2E-43 309.5 22.9 222 68-295 121-344 (369)
4 PTZ00037 DnaJ_C chaperone prot 100.0 7.7E-39 1.7E-43 312.5 23.7 223 68-295 131-365 (421)
5 PRK14286 chaperone protein Dna 100.0 4.2E-38 9.2E-43 303.6 23.8 224 68-296 131-357 (372)
6 PRK14295 chaperone protein Dna 100.0 1.1E-37 2.3E-42 302.4 23.5 222 68-295 147-371 (389)
7 PRK14278 chaperone protein Dna 100.0 1.2E-37 2.6E-42 301.1 23.0 226 68-295 120-349 (378)
8 PRK14284 chaperone protein Dna 100.0 9E-38 1.9E-42 303.2 21.5 223 68-295 139-365 (391)
9 PRK14279 chaperone protein Dna 100.0 2E-37 4.3E-42 300.8 22.9 221 68-295 154-377 (392)
10 PRK14298 chaperone protein Dna 100.0 2.7E-37 5.9E-42 298.4 21.6 225 68-295 122-350 (377)
11 PRK14281 chaperone protein Dna 100.0 3.7E-37 7.9E-42 299.4 22.5 220 68-295 144-371 (397)
12 PRK14287 chaperone protein Dna 100.0 3E-37 6.5E-42 297.6 21.6 223 68-295 119-347 (371)
13 PRK14285 chaperone protein Dna 100.0 5.7E-37 1.2E-41 295.1 22.0 224 68-296 127-353 (365)
14 PRK14301 chaperone protein Dna 100.0 8.3E-37 1.8E-41 294.8 23.1 222 68-295 125-349 (373)
15 PRK14277 chaperone protein Dna 100.0 6.3E-37 1.4E-41 296.8 22.2 219 68-295 136-364 (386)
16 PRK14280 chaperone protein Dna 100.0 7.4E-37 1.6E-41 295.4 21.9 221 68-295 124-352 (376)
17 PRK14300 chaperone protein Dna 100.0 1.1E-36 2.4E-41 293.9 22.9 223 68-295 126-351 (372)
18 PRK14276 chaperone protein Dna 100.0 6.1E-37 1.3E-41 296.4 20.0 221 68-295 127-355 (380)
19 PRK14291 chaperone protein Dna 100.0 2.8E-36 6.1E-41 291.9 22.9 221 69-295 138-369 (382)
20 PRK14297 chaperone protein Dna 100.0 2E-36 4.4E-41 292.7 21.8 220 68-296 129-358 (380)
21 PRK14294 chaperone protein Dna 100.0 3.6E-36 7.8E-41 289.7 22.4 223 68-296 125-350 (366)
22 PRK10767 chaperone protein Dna 100.0 4.7E-36 1E-40 289.4 22.4 221 69-295 124-347 (371)
23 PRK14282 chaperone protein Dna 100.0 6.9E-36 1.5E-40 288.0 23.5 227 68-296 133-363 (369)
24 PRK10266 curved DNA-binding pr 100.0 1.7E-35 3.7E-40 278.8 23.7 177 115-296 115-293 (306)
25 TIGR02349 DnaJ_bact chaperone 100.0 1.8E-35 3.8E-40 283.7 22.8 221 68-297 124-354 (354)
26 PRK14293 chaperone protein Dna 100.0 3E-35 6.5E-40 284.1 22.6 227 68-296 124-354 (374)
27 PRK14299 chaperone protein Dna 100.0 4E-35 8.7E-40 274.5 21.7 161 114-296 126-286 (291)
28 PRK14290 chaperone protein Dna 100.0 9.4E-35 2E-39 279.8 23.5 219 68-295 130-355 (365)
29 PRK14283 chaperone protein Dna 100.0 4.6E-35 1E-39 283.1 20.9 221 68-295 127-355 (378)
30 PRK14289 chaperone protein Dna 100.0 6.6E-35 1.4E-39 282.8 21.5 226 68-296 135-364 (386)
31 PRK14292 chaperone protein Dna 100.0 3E-34 6.5E-39 276.8 22.1 224 68-295 120-347 (371)
32 TIGR03835 termin_org_DnaJ term 100.0 3.2E-32 6.8E-37 275.0 19.5 159 117-280 656-816 (871)
33 KOG0712 Molecular chaperone (D 100.0 4.1E-30 8.8E-35 242.0 13.9 177 115-294 98-337 (337)
34 PF01556 CTDII: DnaJ C termina 99.9 6.2E-23 1.4E-27 157.4 7.3 81 208-289 1-81 (81)
35 KOG0713 Molecular chaperone (D 99.1 1.4E-11 3.1E-16 115.8 0.1 170 114-284 123-328 (336)
36 PRK14289 chaperone protein Dna 99.0 4.1E-09 8.8E-14 102.7 13.7 148 115-291 125-282 (386)
37 PRK14282 chaperone protein Dna 99.0 7.7E-10 1.7E-14 107.2 8.5 87 114-212 272-359 (369)
38 PF01556 CTDII: DnaJ C termina 99.0 5.8E-10 1.3E-14 85.4 6.1 74 119-204 1-76 (81)
39 PRK14290 chaperone protein Dna 99.0 1.7E-09 3.8E-14 104.6 8.3 86 114-212 266-352 (365)
40 PRK14299 chaperone protein Dna 98.9 3.5E-09 7.6E-14 99.5 8.9 73 202-283 125-197 (291)
41 PRK14293 chaperone protein Dna 98.9 2E-08 4.3E-13 97.5 14.1 56 234-291 216-271 (374)
42 PRK14294 chaperone protein Dna 98.9 3.5E-09 7.7E-14 102.5 8.3 86 114-212 260-346 (366)
43 PRK14285 chaperone protein Dna 98.9 4.3E-09 9.3E-14 101.9 8.0 85 115-211 263-348 (365)
44 PRK14284 chaperone protein Dna 98.9 6.4E-09 1.4E-13 101.5 8.7 87 114-211 274-361 (391)
45 PRK10767 chaperone protein Dna 98.9 6.3E-09 1.4E-13 100.9 8.0 87 114-213 258-345 (371)
46 PRK14298 chaperone protein Dna 98.8 5.7E-09 1.2E-13 101.4 7.7 87 114-213 261-348 (377)
47 PRK14296 chaperone protein Dna 98.8 1.3E-07 2.8E-12 91.9 16.1 151 105-283 103-269 (372)
48 COG0484 DnaJ DnaJ-class molecu 98.8 1.1E-08 2.5E-13 98.3 8.0 84 114-210 260-344 (371)
49 PRK14287 chaperone protein Dna 98.8 1.1E-08 2.3E-13 99.3 7.8 85 114-211 258-343 (371)
50 TIGR02349 DnaJ_bact chaperone 98.8 1.4E-08 3.1E-13 97.7 8.2 84 114-210 263-347 (354)
51 PRK14301 chaperone protein Dna 98.8 1.8E-08 3.9E-13 97.8 8.3 84 114-210 260-344 (373)
52 PRK14300 chaperone protein Dna 98.8 1.8E-08 4E-13 97.7 8.3 85 114-210 261-346 (372)
53 PRK10266 curved DNA-binding pr 98.8 2.6E-08 5.6E-13 94.2 9.0 74 204-280 115-201 (306)
54 PRK14279 chaperone protein Dna 98.8 2.3E-08 5E-13 97.7 8.3 83 114-209 289-371 (392)
55 PRK14288 chaperone protein Dna 98.7 2.2E-08 4.8E-13 97.1 8.1 85 114-210 254-339 (369)
56 PRK14295 chaperone protein Dna 98.7 2.9E-08 6.4E-13 96.9 8.4 82 114-207 282-363 (389)
57 PRK14286 chaperone protein Dna 98.7 3.6E-08 7.9E-13 95.7 8.4 85 114-210 266-351 (372)
58 PRK14291 chaperone protein Dna 98.7 6.9E-08 1.5E-12 94.0 10.0 75 114-200 271-346 (382)
59 PRK14276 chaperone protein Dna 98.7 3.9E-08 8.6E-13 95.7 7.9 83 114-209 266-349 (380)
60 PRK14281 chaperone protein Dna 98.7 5.2E-08 1.1E-12 95.4 8.1 83 114-209 282-365 (397)
61 KOG0714 Molecular chaperone (D 98.7 1.6E-07 3.5E-12 85.8 10.7 145 115-260 157-305 (306)
62 PRK14278 chaperone protein Dna 98.7 6.7E-08 1.5E-12 94.0 8.4 85 114-210 259-344 (378)
63 PRK14280 chaperone protein Dna 98.7 6.3E-08 1.4E-12 94.1 8.1 82 114-208 263-345 (376)
64 PRK14297 chaperone protein Dna 98.6 6.4E-08 1.4E-12 94.2 7.8 82 114-208 268-350 (380)
65 PRK14292 chaperone protein Dna 98.6 6.7E-08 1.5E-12 93.7 6.9 84 114-210 258-342 (371)
66 PRK14277 chaperone protein Dna 98.6 1.5E-07 3.1E-12 91.9 8.0 83 114-209 275-358 (386)
67 PRK14283 chaperone protein Dna 98.5 1.9E-07 4.2E-12 90.8 8.1 83 114-209 266-349 (378)
68 PTZ00037 DnaJ_C chaperone prot 98.5 2.9E-07 6.3E-12 90.8 7.5 85 114-210 270-360 (421)
69 KOG0715 Molecular chaperone (D 98.4 5.9E-07 1.3E-11 84.4 5.9 139 67-219 144-288 (288)
70 TIGR03835 termin_org_DnaJ term 98.3 1.2E-06 2.7E-11 90.4 8.2 72 114-198 742-813 (871)
71 KOG0712 Molecular chaperone (D 97.8 0.00015 3.3E-09 69.3 10.0 74 115-200 249-324 (337)
72 COG2214 CbpA DnaJ-class molecu 88.0 1.5 3.3E-05 37.6 6.3 78 119-209 150-227 (237)
73 KOG0715 Molecular chaperone (D 68.5 12 0.00025 35.4 5.7 179 74-283 80-272 (288)
74 PF12991 DUF3875: Domain of un 50.1 19 0.00041 25.5 2.7 25 266-290 26-52 (54)
75 PRK14051 negative regulator Gr 42.2 1.4E+02 0.003 24.4 6.8 71 187-260 47-119 (123)
76 cd02639 R3H_RRM R3H domain of 41.0 37 0.0008 24.5 3.2 23 273-295 17-39 (60)
77 cd06007 R3H_DEXH_helicase R3H 35.7 47 0.001 23.8 3.0 24 273-296 16-39 (59)
78 KOG2724 Nuclear pore complex c 33.7 70 0.0015 32.0 4.8 84 189-275 370-455 (487)
79 cd02640 R3H_NRF R3H domain of 33.7 51 0.0011 23.7 3.0 24 273-296 17-40 (60)
80 COG2214 CbpA DnaJ-class molecu 33.0 1.1E+02 0.0025 25.7 5.7 71 208-282 150-220 (237)
81 TIGR02642 phage_xxxx uncharact 31.2 54 0.0012 29.1 3.3 31 146-177 120-150 (186)
82 PF12791 RsgI_N: Anti-sigma fa 30.2 1.2E+02 0.0027 20.8 4.5 36 223-259 5-40 (56)
83 cd02641 R3H_Smubp-2_like R3H d 29.2 64 0.0014 23.0 2.9 23 274-296 18-40 (60)
84 KOG0315 G-protein beta subunit 27.9 48 0.001 31.2 2.5 32 211-242 18-50 (311)
85 PF08774 VRR_NUC: VRR-NUC doma 25.4 1.1E+02 0.0024 23.4 3.9 27 270-296 62-89 (100)
86 COG5435 Uncharacterized conser 24.6 1.2E+02 0.0027 25.9 4.2 31 266-296 108-138 (147)
87 TIGR00013 taut 4-oxalocrotonat 24.4 1.1E+02 0.0024 21.2 3.4 24 272-296 3-26 (63)
88 TIGR03561 organ_hyd_perox pero 24.2 1.3E+02 0.0028 24.6 4.3 28 270-298 91-118 (134)
89 TIGR03549 conserved hypothetic 21.6 1.1E+02 0.0023 32.8 3.9 27 271-297 85-111 (718)
90 PF02963 EcoRI: Restriction en 20.9 34 0.00073 31.1 0.1 39 225-263 162-200 (257)
91 PF04246 RseC_MucC: Positive r 20.7 1.9E+02 0.0041 23.6 4.6 26 75-100 4-29 (135)
92 PHA02902 putative IMV membrane 20.5 84 0.0018 23.2 2.0 43 255-297 27-69 (70)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-41 Score=319.47 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=201.3
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEE--EEEehHhHhcCcEEEEEEeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKK--LECTLEELCFGCTKKIKITRDA 145 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~--l~vsLeea~~G~~k~I~i~r~~ 145 (298)
-.+|.+++.|+..+|+.+....|..|.+.|..+++++..|+.|.|. |.-.... ..+..+..|..|..+-.+....
T Consensus 123 ~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~---G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~p 199 (371)
T COG0484 123 EITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGS---GQVRTVQRTGFFSFQQTCPTCNGTGKIIKDP 199 (371)
T ss_pred EeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCc---CeEEEEEeeeEEEEEEECCCCccceeECCCC
Confidence 4789999999999999999999999999999999999999999887 3323333 6677777888888877776555
Q ss_pred e--cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcC
Q 036222 146 I--TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALT 222 (298)
Q Consensus 146 ~--c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~ 222 (298)
| |...+.+.+.++++|+||+|+.+|++|+++|+|++++++ ++|||||.|.|++|+.|.|+|+|||++++|++.+|++
T Consensus 200 C~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~Aal 279 (371)
T COG0484 200 CGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAAL 279 (371)
T ss_pred CCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhc
Confidence 4 666678999999999999999999999999999998855 7899999999999999999999999999999999999
Q ss_pred CCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 223 GCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 223 G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
|+++.||||||+ ++|+||+ ++|+|++++|+|+|||...+ ..+|||||+++|++|++|+.+|+++|+++.+
T Consensus 280 G~~i~vptl~g~-~~l~ip~-Gtq~G~~~rl~gkG~p~~~~-~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~ 349 (371)
T COG0484 280 GGEIEVPTLDGR-VKLKIPA-GTQTGEVFRLRGKGMPKLRS-GGRGDLYVRVKVETPKNLSDEQKELLEEFAK 349 (371)
T ss_pred CCEEEEEecCCC-EEEecCC-CCccCcEEEEcCCCccccCC-CCcCCEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 999999999998 9999999 99999999999999998765 5679999999999999999999999999986
No 2
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.5e-39 Score=309.26 Aligned_cols=227 Identities=14% Similarity=0.194 Sum_probs=188.7
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEE-EEEEehHhHhcCcEEEEEEeeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEK-KLECTLEELCFGCTKKIKITRDAI 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~-~l~vsLeea~~G~~k~I~i~r~~~ 146 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|....-..... .+.+.....|.-|..+-.+.+..|
T Consensus 130 ~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C 209 (372)
T PRK14296 130 YLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKC 209 (372)
T ss_pred eccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccc
Confidence 4689999999999999999999999999999888888899999887321100000 011122223444433333334433
Q ss_pred --cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCC-CCCCccEEEEEEEeccCccccc-ccceeEEEEEChhhhcC
Q 036222 147 --TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVP-GTQPADIIFLIAEKRHHLFRRD-GDDLELAVEIPLVKALT 222 (298)
Q Consensus 147 --c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~-~~~~GDL~v~I~vk~h~~F~R~-G~DL~~~~~Isl~eAl~ 222 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+ |+||+++++|+|.+||+
T Consensus 210 ~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAll 289 (372)
T PRK14296 210 KNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAIL 289 (372)
T ss_pred cCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhC
Confidence 5666788889999999999999999999999999875 4578999999999999999995 89999999999999999
Q ss_pred CCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 223 GCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 223 G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
|+++.|+||||+ +.|+||+ ++++|++++|+|+|||...+++.+|||||+|+|.||+.||++|+++|+++++.
T Consensus 290 G~~~~i~tldG~-~~v~ip~-~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l~~~ 361 (372)
T PRK14296 290 GNEIIIKTLDGD-IKYKLPK-SINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQIYEQ 361 (372)
T ss_pred CCEEEeeCCCCC-EEEEECC-ccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 999999999998 8999999 99999999999999996554567899999999999999999999999999864
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.5e-39 Score=309.47 Aligned_cols=222 Identities=18% Similarity=0.245 Sum_probs=187.0
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++.....|..|.+++...+ .+..|..|.|.... ......+.+...|.-|..+-.+.+..|
T Consensus 121 ~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~~~~~C~ 196 (369)
T PRK14288 121 ELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDK-ALETCKQCNGQGQV---FMRQGFMSFAQTCGACQGKGKIIKTPCQ 196 (369)
T ss_pred cccHHHHhCCeEEEEEEEeeccCCCCCCcccCCC-CCcCCCCCCCCcEE---EEEeceEEEEEecCCCCCCceEccccCc
Confidence 4699999999999999999999999999887664 56789999876321 111111222223433333333333333
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCCe
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGCT 225 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 225 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++.+|||+|+|++++|+.|+|+|+||+++++|+|.+||+|++
T Consensus 197 ~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~ 276 (369)
T PRK14288 197 ACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHT 276 (369)
T ss_pred cCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCE
Confidence 5666788899999999999999999999999999987778999999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 226 ISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 226 i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+.|+||||+.++|+||+ ++++|++++|+|+|||..+. ..+|||||+|+|.||+.|+++|+++|+++++
T Consensus 277 i~v~tLdG~~l~i~i~~-~~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 344 (369)
T PRK14288 277 IKVPSLKGDELELKIPR-NARDRQTFAFRNEGVKHPES-SYRGSLIVELQVIYPKSLNKEQQELLEKLHA 344 (369)
T ss_pred EEeecCCCCEEEEEeCC-CCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999888999999 99999999999999997653 4689999999999999999999999999985
No 4
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=312.54 Aligned_cols=223 Identities=25% Similarity=0.425 Sum_probs=187.8
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCC------CCCEE--EEEEEehHhHhcCcEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVK------PPAVE--KKLECTLEELCFGCTKKI 139 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~k------g~di~--~~l~vsLeea~~G~~k~I 139 (298)
..+|.+++.|+..+|+....+.|..|.+++... ..+..|..|.|.... +. +. ....|+ .|.|.-+.+
T Consensus 131 ~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~-~~~~~C~~C~G~G~~~~~~~~g~-~~~q~~~~C~---~C~G~G~~i 205 (421)
T PTZ00037 131 KVTLEQIYNGAMRKLAINKDVICANCEGHGGPK-DAFVDCKLCNGQGIRVQIRQMGS-MIHQTQSTCN---SCNGQGKII 205 (421)
T ss_pred eeeHHHHhCCCceEEEeeccccccccCCCCCCC-CCCccCCCCCCCCeEEEEEeecc-eeeEEEEeCC---CCCCcceec
Confidence 468999999999999999999999999999754 356789999877321 11 11 112222 344433332
Q ss_pred EE-eeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChh
Q 036222 140 KI-TRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLV 218 (298)
Q Consensus 140 ~i-~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~ 218 (298)
.. .....|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++.+|||||+|.+++|+.|+|+|+||+++++|+|.
T Consensus 206 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~ 285 (421)
T PTZ00037 206 PESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLY 285 (421)
T ss_pred cccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHH
Confidence 21 12234666778999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred hhcCCCeEEEeCCCCcEEEEEcCC-ccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHhhhh
Q 036222 219 KALTGCTISVPLLGGEKMDLSIDD-EIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFP--TELTDEQRSNVLGILE 295 (298)
Q Consensus 219 eAl~G~~i~I~tldG~~i~v~ip~-~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P--~~Ls~~qr~~l~~il~ 295 (298)
+||+|+++.|+||||+.+.|++|+ +++++|++++|+|+|||..++++.+|||||+|+|.|| +.||++|+++|++||+
T Consensus 286 eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~ 365 (421)
T PTZ00037 286 EALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP 365 (421)
T ss_pred HHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhcc
Confidence 999999999999999989999987 2499999999999999987655679999999999999 9999999999999986
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.2e-38 Score=303.64 Aligned_cols=224 Identities=21% Similarity=0.375 Sum_probs=191.7
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..+|++...+.|..|.+.+...+..+..|..|.|.... +...-.+.+...|.-|..+-.+.+..|
T Consensus 131 ~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v---~~~~G~~~~~~~C~~C~G~G~~~~~~C~ 207 (372)
T PRK14286 131 EVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQI---RRTQGFFSVATTCPTCRGKGTVISNPCK 207 (372)
T ss_pred EEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEE---EEEeceEEEEEeCCCCCceeeEecccCC
Confidence 4689999999999999999999999999998887777899999877321 111111223335555555544444444
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||||+|++++|+.|+|+|+||++++.|+|.+|++|+
T Consensus 208 ~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~ 287 (372)
T PRK14286 208 TCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGA 287 (372)
T ss_pred CCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCC
Confidence 666678888999999999999999999999999987754 679999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
++.|+||||+.+.|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.|+++|+++|+++++.
T Consensus 288 ~~~i~tldG~~i~v~ip~-g~~~g~~~ri~G~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~~ 357 (372)
T PRK14286 288 EIEVPTIDGKKAKMKIPE-GTESGQVFRLKGHGMPYLGA-YGKGDQHVIVKIEIPKKITRRQRELIEEFARE 357 (372)
T ss_pred EEEEeCCCCCEEEEEeCC-ccCCCcEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 999999999989999999 99999999999999998653 46899999999999999999999999999864
No 6
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-37 Score=302.40 Aligned_cols=222 Identities=23% Similarity=0.376 Sum_probs=190.4
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|.... +.....+.+...|.-|..+-.+.+..|
T Consensus 147 ~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~~~~~C~ 223 (389)
T PRK14295 147 TLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQV---SRNSGGFSLSEPCPDCKGRGLIADDPCL 223 (389)
T ss_pred EEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEE---EEEecceEEEEecCCCcceeEEeccCCC
Confidence 4689999999999999999999999999999888878899999876321 111111223334555555554544444
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+.+ .+|||+|+|.+++|+.|+|+|+||+++++|+|.+|++|+
T Consensus 224 ~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~ 303 (389)
T PRK14295 224 VCKGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGA 303 (389)
T ss_pred CCCCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCC
Confidence 566678888999999999999999999999999986644 789999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++|+||||+.+.|+||+ ++++|++++|+|+|||.. .+.+|||||+|+|.||+.||++|+++|+++++
T Consensus 304 ~~~I~tldG~~~~v~ip~-g~~~g~~iri~G~G~p~~--~~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 304 EVRVPTLGGPPVTVKLPP-GTPNGRVLRVRGKGAVRK--DGTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred eEEEECCCCCEEEEEECC-ccCCCcEEEECCCCcCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999889999999 999999999999999974 25689999999999999999999999999986
No 7
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-37 Score=301.09 Aligned_cols=226 Identities=21% Similarity=0.335 Sum_probs=187.2
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEE-EEEEehHhHhcCcEEEEEEeeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEK-KLECTLEELCFGCTKKIKITRDAI 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~-~l~vsLeea~~G~~k~I~i~r~~~ 146 (298)
..+|.+++.|+..++++.....|..|.+.+...+..+..|..|.|....-..... .-.+.....|.-|..+-.+.+..|
T Consensus 120 ~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C 199 (378)
T PRK14278 120 RLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPC 199 (378)
T ss_pred EEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCC
Confidence 4689999999999999999999999999998888778899999877321000000 001111223333333333333333
Q ss_pred --cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 147 --TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 147 --c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
|...+++.+.++++|.||||+.+|++|+|+|+|++.+++ .+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|
T Consensus 200 ~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G 279 (378)
T PRK14278 200 HECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALG 279 (378)
T ss_pred CCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcC
Confidence 566678889999999999999999999999999998765 67999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++.|+|||+..+.|.||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.||++|+++|+++++
T Consensus 280 ~~~~i~tld~~~i~v~ip~-g~~~g~~lrl~g~G~p~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~ 349 (378)
T PRK14278 280 TTVTVEAILDGPSEITIPP-GTQPGSVITLRGRGMPHLRS-GGRGDLHAHVEVVVPTRLDHEDIELLRELKA 349 (378)
T ss_pred CeEEEecCCCCeEEEEeCC-CcCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 9999999977679999999 99999999999999997653 5689999999999999999999999999985
No 8
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9e-38 Score=303.18 Aligned_cols=223 Identities=22% Similarity=0.322 Sum_probs=189.0
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++.....|..|.+++...+..+..|+.|.|.... +...-.+.+...|.-|..+-.+.+..|
T Consensus 139 ~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v---~~~~G~~~~~~~C~~C~G~G~~~~~~C~ 215 (391)
T PRK14284 139 TLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQV---VQSRGFFSMASTCPECGGEGRVITDPCS 215 (391)
T ss_pred EEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEE---EEEeceEEEEEECCCCCCCCcccCCcCC
Confidence 4689999999999999999999999999999888888899999887321 111111222334444444433434444
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||||+|++++|+.|+|+|+||+++++|+|.+|++|+
T Consensus 216 ~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~ 295 (391)
T PRK14284 216 VCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGM 295 (391)
T ss_pred CCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCC
Confidence 555567888899999999999999999999999998754 789999999999999999999999999999999999999
Q ss_pred eEEEeCCC-CcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 225 TISVPLLG-GEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 225 ~i~I~tld-G~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++|+||| |..++|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.+|+.|+++|+++|+++++
T Consensus 296 ~~~v~tld~g~~i~v~Ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 365 (391)
T PRK14284 296 KKEIPTLLKEGTCRLTIPE-GIQSGTILKVRGQGFPNVHG-KGRGDLLVRISVETPQNLSEEQKELLRQFAA 365 (391)
T ss_pred eEEEeecCCCcEEEEEECC-ccCCCeEEEECCCCCCCCCC-CCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999 6679999999 99999999999999998653 4689999999999999999999999999985
No 9
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-37 Score=300.76 Aligned_cols=221 Identities=20% Similarity=0.364 Sum_probs=190.4
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+.+...+..+..|+.|.|.... +.....+.....|.-|..+-.+.+..|
T Consensus 154 ~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~i~~~C~ 230 (392)
T PRK14279 154 TLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVI---SRNQGAFGFSEPCTDCRGTGSIIEDPCE 230 (392)
T ss_pred EEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEE---EEEecceEEEEecCCCCceeEEeCCcCC
Confidence 4689999999999999999999999999999888888899999877321 111112223345555555555544444
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||+|+|.+++|+.|+|+|+||+++++|+|.+|++|+
T Consensus 231 ~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~ 310 (392)
T PRK14279 231 ECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGS 310 (392)
T ss_pred CCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCc
Confidence 566678889999999999999999999999999988755 679999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++|+|+||+ +.|+||+ ++++|++++|+|+|||.. .+.+|||||+|+|.||++|+++|+++|+++++
T Consensus 311 ~~~v~~ldg~-i~v~Ip~-g~~~g~~iri~g~G~p~~--~~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 311 TLSVPTLDGP-VGVKVPA-GTADGRILRVRGRGVPKR--SGGAGDLLVTVKVAVPPNLDGAAAEALEAYAE 377 (392)
T ss_pred eEEEEcCCce-EEEEECC-CCCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999997 8999999 999999999999999974 25689999999999999999999999999986
No 10
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.7e-37 Score=298.45 Aligned_cols=225 Identities=20% Similarity=0.298 Sum_probs=187.8
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEE-EEEEehHhHhcCcEEEEEEeeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEK-KLECTLEELCFGCTKKIKITRDAI 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~-~l~vsLeea~~G~~k~I~i~r~~~ 146 (298)
..+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|....-..... ...+.+...|.-|..+-.+.+..|
T Consensus 122 ~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C 201 (377)
T PRK14298 122 YITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPC 201 (377)
T ss_pred EEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCC
Confidence 4689999999999999999999999999999888877899999877321100000 011122333444443333333333
Q ss_pred --cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCC-CCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 147 --TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVP-GTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 147 --c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~-~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++.|+|.+|++|
T Consensus 202 ~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G 281 (377)
T PRK14298 202 PVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALG 281 (377)
T ss_pred CCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCC
Confidence 6666788889999999999999999999999999865 4578999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++.|+||||+ +.|+||+ ++++|++++|+|+|||..++ +.+|||||+|+|.||+.|+++|+++|+++++
T Consensus 282 ~~~~i~tldG~-i~v~ip~-g~~~g~~lri~g~G~p~~~~-~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~ 350 (377)
T PRK14298 282 ADIMVPTLYGK-VKMNIPP-GTQTHSVFRLKDKGMPRLHG-HGKGDQLVKVIVKTPTKLTQEQKELLREFDE 350 (377)
T ss_pred CeEEEecCCCC-EEEEeCC-CcccCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999998 8999999 99999999999999997653 4689999999999999999999999999985
No 11
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-37 Score=299.41 Aligned_cols=220 Identities=21% Similarity=0.316 Sum_probs=186.0
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEE-----EEehHhHhcCcEEEEEEe
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKL-----ECTLEELCFGCTKKIKIT 142 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l-----~vsLeea~~G~~k~I~i~ 142 (298)
..+|.+++.|+..++++...+.|..|.+++...+ .+..|..|.|.... +... .+.....|.-|..+-.+.
T Consensus 144 ~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~-~~~~C~~C~G~G~~----~~~~~~~~g~~~~~~~C~~C~G~G~~~ 218 (397)
T PRK14281 144 KLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTG-ATETCPTCHGSGEV----RQASKTMFGQFVNITACPTCGGEGRVV 218 (397)
T ss_pred EeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCC-CCccCCCCCCCcEE----EEEEecccceEEEEEecCCCcceeeee
Confidence 4689999999999999999999999999988765 56789999876321 1100 011122344444444444
Q ss_pred eeee--cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 143 RDAI--TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 143 r~~~--c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
+..| |...+++.+.++++|.||+|+++|++|+|+|+|++.+++ .+|||+|+|++++|+.|+|+|+||+++++|+|.+
T Consensus 219 ~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~e 298 (397)
T PRK14281 219 KDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPD 298 (397)
T ss_pred CCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHH
Confidence 4444 666678888999999999999999999999999997754 7899999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 220 ALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 220 Al~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
||+|++++|+||||+ +.|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.||++|+++|+++++
T Consensus 299 Al~G~~~~i~tldg~-i~v~ip~-g~~~G~~~ri~g~G~P~~~~-~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 371 (397)
T PRK14281 299 LVLGTKVEVPTLDGA-VKLTIPA-GTQPETMLRIPGKGIGHLRG-SGRGDQYVRVNVFVPKEVSHQDKELLKELKK 371 (397)
T ss_pred HhcCCeEEeecCCcc-EEEEeCC-ccCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 999999999999997 8999999 99999999999999997653 4789999999999999999999999999985
No 12
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-37 Score=297.62 Aligned_cols=223 Identities=20% Similarity=0.335 Sum_probs=191.2
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEE---EEEehHhHhcCcEEEEEEeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKK---LECTLEELCFGCTKKIKITRD 144 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~---l~vsLeea~~G~~k~I~i~r~ 144 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|....- .... -.+..+..|..|..+..+.+.
T Consensus 119 ~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~--~~~~~~~G~~~~~~~C~~C~G~G~~~~~ 196 (371)
T PRK14287 119 TLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLN--VEQNTPFGRVVNRRVCHHCEGTGKIIKQ 196 (371)
T ss_pred EEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEE--EEEecCCceEEEEEeCCCCCCCCccccc
Confidence 36899999999999999999999999999988877788999998873210 0000 012335567777766666555
Q ss_pred ee--cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhc
Q 036222 145 AI--TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKAL 221 (298)
Q Consensus 145 ~~--c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl 221 (298)
.| |...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||+|+|++++|+.|+|+|+||++++.|+|.+|+
T Consensus 197 ~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl 276 (371)
T PRK14287 197 KCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVA 276 (371)
T ss_pred cCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHh
Confidence 55 444456778899999999999999999999999987644 789999999999999999999999999999999999
Q ss_pred CCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 222 TGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 222 ~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+|++++|+|+||+ +.|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.+|+.|+.+|+++|+++++
T Consensus 277 ~G~~~~i~~ldg~-i~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 347 (371)
T PRK14287 277 LGDEIEVPTLNGK-VKLKIPA-GTQTGTSFRLRGKGVPNVHG-RGQGDQHVQVRVVTPKNLTEKEKELMREFAG 347 (371)
T ss_pred CCCEEEEEcCCCC-EEEEECC-CccCCcEEEEcCCCccCCCC-CCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 9999999999998 8999999 99999999999999997654 4689999999999999999999999999985
No 13
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.7e-37 Score=295.10 Aligned_cols=224 Identities=20% Similarity=0.280 Sum_probs=189.4
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|....-. ..-.+.....|.-|..+-.+....|
T Consensus 127 ~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~---~~G~~~~~~~C~~C~G~G~~~~~~C~ 203 (365)
T PRK14285 127 EISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQ---GGGFFRVTTTCPKCYGNGKIISNPCK 203 (365)
T ss_pred EEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEe---cCceeEEeeecCCCCCcccccCCCCC
Confidence 468999999999999999999999999999888887889999988732110 0001122333444443333333333
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+++ .+|||||+|++++|+.|+|+|+||+++++|+|.+||+|+
T Consensus 204 ~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~ 283 (365)
T PRK14285 204 SCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGK 283 (365)
T ss_pred CCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCC
Confidence 566678889999999999999999999999999998765 689999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+++|+||||+.+.|.||+ ++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+.+|+++|++++..
T Consensus 284 ~~~i~tldG~~v~V~Ip~-g~~~g~~irl~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~~ 353 (365)
T PRK14285 284 EIKIQTIASKKIKIKIPK-GTENDEQIIIKNEGMPILHT-EKFGNLILIIKIKTPKNLNSNAIKLLENLSKE 353 (365)
T ss_pred EEEEECCCCCEEEEEeCC-CcCCCcEEEECCCCccCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHH
Confidence 999999999889999999 99999999999999997653 45799999999999999999999999999853
No 14
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-37 Score=294.76 Aligned_cols=222 Identities=20% Similarity=0.312 Sum_probs=189.3
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|.... ....-.+.....|.-|..+-.+....|
T Consensus 125 ~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v---~~~~G~~~~~~~C~~C~G~G~~~~~~C~ 201 (373)
T PRK14301 125 TVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQV---RQSQGFFQIAVPCPVCRGEGRVITHPCP 201 (373)
T ss_pred eccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEE---EEEeeeEEEEEeCCCCCceeeecCCCCC
Confidence 3689999999999999999999999999998887777899999887322 111111222344545544444444433
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+. +.+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|+
T Consensus 202 ~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~ 281 (373)
T PRK14301 202 KCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGD 281 (373)
T ss_pred CCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCC
Confidence 66667888999999999999999999999999998764 4789999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++|+||||+ ++|.||+ ++++|++++|+|+|||..++ +.+|||||+|+|.||+.|+++|+++|+++++
T Consensus 282 ~~~v~tldG~-i~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~ 349 (373)
T PRK14301 282 RIEVPTLDDP-VTLDIPK-GTQSGEVFRLRGKGLPYLGS-SQKGDLLVEVSVVTPTKLTKRQEELLREFEA 349 (373)
T ss_pred eEEEecCCcc-EEEEECC-CcCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999998 8999999 99999999999999998653 5689999999999999999999999999885
No 15
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.3e-37 Score=296.80 Aligned_cols=219 Identities=20% Similarity=0.323 Sum_probs=185.9
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCC------CC-CEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVK------PP-AVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~k------g~-di~~~l~vsLeea~~G~~k~I~ 140 (298)
.-+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|.... +. -+... ..|.-|..+-.
T Consensus 136 ~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~------~~C~~C~G~G~ 209 (386)
T PRK14277 136 ELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNI------RTCDRCHGEGK 209 (386)
T ss_pred EEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEE------EECCCCCccee
Confidence 3689999999999999999999999999998877777899999877321 00 11111 23444433333
Q ss_pred Eeeeee--cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEECh
Q 036222 141 ITRDAI--TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPL 217 (298)
Q Consensus 141 i~r~~~--c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl 217 (298)
+.+..| |...+++.+.++++|.||+|+++|++|+|+|+|++.+. ..+|||+|+|++++|+.|+|+|+||+++++|+|
T Consensus 210 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl 289 (386)
T PRK14277 210 IITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITF 289 (386)
T ss_pred eccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCH
Confidence 333333 66667888999999999999999999999999998654 468999999999999999999999999999999
Q ss_pred hhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 218 VKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 218 ~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
.+||+|+++.|+||||+ +.|.||+ ++++|++++|+|+|||..++ +.+|||||+|+|.||+.||++|+++|+++++
T Consensus 290 ~eAl~G~~~~i~tldG~-~~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~ 364 (386)
T PRK14277 290 TDAALGGEIEIPTLDGK-VKFTIPE-GTQTGTKFRLRGKGIPHLRG-RGRGDQIVKVYIEVPKKLTEKQKELLREFEK 364 (386)
T ss_pred HHHhCCCEEEEEcCCCC-EEEEECC-CCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 99999999999999998 8999999 89999999999999997654 4689999999999999999999999999985
No 16
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.4e-37 Score=295.42 Aligned_cols=221 Identities=22% Similarity=0.345 Sum_probs=187.5
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCC------C-CCEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVK------P-PAVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~k------g-~di~~~l~vsLeea~~G~~k~I~ 140 (298)
.-+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|.... + .-+.....|+ .|.|.-+.+.
T Consensus 124 ~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~---~C~G~G~~~~ 200 (376)
T PRK14280 124 TLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCP---HCNGTGQEIK 200 (376)
T ss_pred EEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcC---CCCCCCceec
Confidence 4689999999999999999999999999998887777899999876321 0 1122233333 4555544321
Q ss_pred EeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 141 ITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 141 i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
.....|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||+|+|++++|+.|+|+|+||++++.|+|.+
T Consensus 201 -~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~e 279 (376)
T PRK14280 201 -EKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQ 279 (376)
T ss_pred -CCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHH
Confidence 22233556678888999999999999999999999999987654 7899999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 220 ALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 220 Al~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
||+|+++.|+||||+ +.|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.||++|+++|+++++
T Consensus 280 Al~G~~~~i~tldg~-i~v~ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~ 352 (376)
T PRK14280 280 AALGDEIEVPTLHGK-VKLKIPA-GTQTGTQFRLKGKGVPNVRG-YGQGDQYVVVRVVTPTKLTDRQKELLREFAE 352 (376)
T ss_pred HhCCCEEEEecCCce-EEEEECC-CCCCCcEEEEcCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999997 8999999 99999999999999998643 4689999999999999999999999999985
No 17
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-36 Score=293.85 Aligned_cols=223 Identities=21% Similarity=0.314 Sum_probs=190.3
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|.... +...-.+.++..|.-|..+-.+.+..|
T Consensus 126 ~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~~~~~C~ 202 (372)
T PRK14300 126 TINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGAT---RMQQGFFTIEQACHKCQGNGQIIKNPCK 202 (372)
T ss_pred EEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEE---EEeeceEEEEEeCCCCCccceEeCCCCC
Confidence 3589999999999999999999999999998877777899999887322 111112223334555555444444443
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++... ..+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|+
T Consensus 203 ~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~ 282 (372)
T PRK14300 203 KCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGG 282 (372)
T ss_pred CCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCC
Confidence 66667889999999999999999999999999998654 4789999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
++.|+|+||+.+.|.||+ ++++|++++|+|+|||...+ ..+|||||+|+|.||++||++|+++|++++.
T Consensus 283 ~~~i~~ldg~~i~v~Ip~-g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~ 351 (372)
T PRK14300 283 EIEVPVIEGGKVNLTIPA-GTQNGDQLRLRSKGMSKMRS-TIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351 (372)
T ss_pred EEEEecCCCCEEEEEECC-ccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999889999999 99999999999999997643 4689999999999999999999999999985
No 18
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.1e-37 Score=296.36 Aligned_cols=221 Identities=21% Similarity=0.365 Sum_probs=187.6
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCC-------CCEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKP-------PAVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg-------~di~~~l~vsLeea~~G~~k~I~ 140 (298)
..+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|..... ..+.....| ..|.|.-+.+.
T Consensus 127 ~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C---~~C~G~G~~~~ 203 (380)
T PRK14276 127 NLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTC---DVCHGTGKEIK 203 (380)
T ss_pred EEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEEC---CCCCCCCcccc
Confidence 46899999999999999999999999999988887788999998863221 111222233 25555544432
Q ss_pred EeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 141 ITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 141 i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
.....|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++ .+|||+|+|++++|+.|+|+|+||+++++|+|.+
T Consensus 204 -~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~e 282 (380)
T PRK14276 204 -EPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQ 282 (380)
T ss_pred -CCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHH
Confidence 22223555577888999999999999999999999999987654 6799999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 220 ALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 220 Al~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
|++|++++|+|+||+ +.|.||+ ++++|++++|+|+|||.... +.+|||||+|+|.||+.||++|+++|++++.
T Consensus 283 Al~G~~~~v~tldg~-i~v~ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~ 355 (380)
T PRK14276 283 AALGDTVEVPTVHGD-VELKIPA-GTQTGKKFRLRGKGAPKLRG-GGNGDQHVTVNIVTPTKLNDAQKEALKAFAK 355 (380)
T ss_pred HhCCCeEEEEcCCCc-EEEEECC-CCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999998 8999999 99999999999999998653 4689999999999999999999999999985
No 19
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.8e-36 Score=291.90 Aligned_cols=221 Identities=22% Similarity=0.357 Sum_probs=189.3
Q ss_pred chhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeee--e
Q 036222 69 SSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDA--I 146 (298)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~--~ 146 (298)
.+|.+++.|+..+|++...+.|..|.+.+...+..+..|..|.|.... +.....+.+...|.-|..+-.+ +.. .
T Consensus 138 vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~-~~~C~~ 213 (382)
T PRK14291 138 ISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEI---YQRGGFFRISQTCPTCGGEGVL-REPCSK 213 (382)
T ss_pred EEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEE---EEecceEEEEecCCCCCCceEE-ccCCCC
Confidence 589999999999999999999999999998888878899999877322 1112223334445555444422 333 3
Q ss_pred cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCC-CCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCCe
Q 036222 147 TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVP-GTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGCT 225 (298)
Q Consensus 147 c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~-~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 225 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||++++.|+|.+|++|++
T Consensus 214 C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~ 293 (382)
T PRK14291 214 CNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTE 293 (382)
T ss_pred CCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCE
Confidence 6666788999999999999999999999999999876 458999999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHhhhh
Q 036222 226 ISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPT--ELT------DEQRSNVLGILE 295 (298)
Q Consensus 226 i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~--~Ls------~~qr~~l~~il~ 295 (298)
+.|+|+||+.++|.||+ ++++|++++|+|+|||.... ..+|||||+|+|.||+ .|| ++|+++|++++.
T Consensus 294 ~~i~~ldG~~l~V~Ip~-g~~~G~~i~i~G~G~p~~~~-~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~ 369 (382)
T PRK14291 294 LEVPLLDGKKEKVKIPP-GTKEGDKIRVPGKGMPRLKG-SGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDK 369 (382)
T ss_pred EEEecCCCCEEEEEECC-ccCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHh
Confidence 99999999889999999 99999999999999998653 4689999999999998 599 999999999875
No 20
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2e-36 Score=292.74 Aligned_cols=220 Identities=20% Similarity=0.344 Sum_probs=187.1
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCC-------CCEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKP-------PAVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg-------~di~~~l~vsLeea~~G~~k~I~ 140 (298)
..+|.+++.|+..++++...+.|..|.+.+...+.....|..|.|....- .-+.. ...|..|..+-.
T Consensus 129 ~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~------~~~C~~C~G~G~ 202 (380)
T PRK14297 129 NLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVS------TTTCDKCGGSGK 202 (380)
T ss_pred EEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEE------EEeCCCCCCCce
Confidence 36899999999999999999999999999998887788999998773210 01122 223444443333
Q ss_pred Eeeee--ecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEECh
Q 036222 141 ITRDA--ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPL 217 (298)
Q Consensus 141 i~r~~--~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl 217 (298)
+.... .|...+++.+.++++|.||+|+.+|++|+|+|+|++.+.+ .+|||||+|.+++|+.|+|+|+||+++++|+|
T Consensus 203 ~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl 282 (380)
T PRK14297 203 VIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISF 282 (380)
T ss_pred EcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCH
Confidence 33333 3556677888999999999999999999999999987654 68999999999999999999999999999999
Q ss_pred hhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 218 VKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 218 ~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
.+||+|++++|+|+||+ +.|.||+ ++++|++++|+|+|||.... +.+|||||+|+|.||+.||++|+++|+++++.
T Consensus 283 ~eAl~G~~~~i~~ldg~-~~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~~ 358 (380)
T PRK14297 283 AKAALGTEIKVPTVDGE-VKYEVPA-GTQPGTVFRLKGKGVPRVNS-TGRGNQYVTVIVDIPKKLNSKQKEALTMFMEA 358 (380)
T ss_pred HHHhCCCcEEEEcCCCc-EEEEECC-CcCCCCEEEEcCCCcCCCCC-CCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 99999999999999997 8999999 99999999999999997643 57899999999999999999999999999864
No 21
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.6e-36 Score=289.70 Aligned_cols=223 Identities=21% Similarity=0.344 Sum_probs=187.7
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI- 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~- 146 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|..... ...-.+.....|.-|..+-.+....|
T Consensus 125 ~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~---~~~G~~~~~~~C~~C~G~G~~~~~~C~ 201 (366)
T PRK14294 125 TLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVT---QSQGFFSIRTTCPRCRGMGKVIVSPCK 201 (366)
T ss_pred EeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEE---EEeeeEEEEeeCCCCCCcCeecCcCCC
Confidence 46899999999999999999999999999988888788999998773321 11111122333444433333333333
Q ss_pred -cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCC
Q 036222 147 -TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGC 224 (298)
Q Consensus 147 -c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~ 224 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++.+. +.+|||+|+|.+++|+.|+|+|+||++++.|+|.+||+|+
T Consensus 202 ~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~ 281 (366)
T PRK14294 202 TCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGA 281 (366)
T ss_pred CCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCC
Confidence 66667888899999999999999999999999998754 4789999999999999999999999999999999999999
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+++|+||||+ +.|.||+ ++++|++++|+|+|||.... +.+|||||+|+|.+|+.|+.+|+++|+++++.
T Consensus 282 ~~~i~tldG~-~~v~ip~-g~~~g~~iri~G~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~~ 350 (366)
T PRK14294 282 QIEVPTLEGE-RELKIPK-GTQPGDIFRFKGKGIPSLRG-GGRGDQIIEVEVKVPTRLTKKQEELLTEFARL 350 (366)
T ss_pred eEEEECCCCc-EEEEECC-CcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 9999999997 6999999 99999999999999997653 46899999999999999999999999999853
No 22
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.7e-36 Score=289.38 Aligned_cols=221 Identities=25% Similarity=0.373 Sum_probs=186.6
Q ss_pred chhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeee--
Q 036222 69 SSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKLECTLEELCFGCTKKIKITRDAI-- 146 (298)
Q Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~-- 146 (298)
.+|.+++.|+..++++...+.|..|.+++...+.....|..|.|.... +...-.+.++..|.-|..+-.+.+..|
T Consensus 124 vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~---~~~~g~~~~~~~C~~C~G~G~~~~~~C~~ 200 (371)
T PRK10767 124 ITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQV---RMQQGFFTVQQTCPTCHGRGKIIKDPCKK 200 (371)
T ss_pred eehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEE---EEeeceEEEEEeCCCCCCceeECCCCCCC
Confidence 589999999999999999999999999998888877899999876321 110011122233444443333333333
Q ss_pred cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCCe
Q 036222 147 TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGCT 225 (298)
Q Consensus 147 c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 225 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+. ..+|||+|+|++++|+.|+|+|+||++++.|+|.+||+|++
T Consensus 201 C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 280 (371)
T PRK10767 201 CHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGE 280 (371)
T ss_pred CCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCe
Confidence 56667888999999999999999999999999998654 47899999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 226 ISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 226 i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
++|+||||. +.|.||+ ++++|++++|+|+|||.... +.+|||||+|+|.||+.|+.+|+++|+++++
T Consensus 281 ~~i~~ldG~-i~v~ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 281 IEVPTLDGR-VKLKIPE-GTQTGKLFRLRGKGVKSVRS-GARGDLYCQVVVETPVNLTKRQKELLEEFEE 347 (371)
T ss_pred EEEecCCCc-EEEEeCC-CCCCCCEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999995 8999999 99999999999999997653 5789999999999999999999999999986
No 23
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.9e-36 Score=288.03 Aligned_cols=227 Identities=21% Similarity=0.262 Sum_probs=189.3
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEE-EEEehHhHhcCcEEEEEEeeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKK-LECTLEELCFGCTKKIKITRDAI 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~-l~vsLeea~~G~~k~I~i~r~~~ 146 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|....-....+. -.+.....|.-|..+-.+.+..|
T Consensus 133 ~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C 212 (369)
T PRK14282 133 EVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYC 212 (369)
T ss_pred EEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCC
Confidence 46899999999999999999999999999988888788999998773210000000 00111234444444444444433
Q ss_pred --cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 147 --TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 147 --c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
|...+++.+.++++|.||+|+.+|++|+|+|+|++.+.+ .+|||+|+|++++|+.|+|+|+||++++.|+|.+|++|
T Consensus 213 ~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G 292 (369)
T PRK14282 213 HECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILG 292 (369)
T ss_pred CCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCC
Confidence 555678888999999999999999999999999986654 78999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+++.|+|+||+.+.|+||+ ++++|++++|+|+|||...+ +.+|||||+|+|.+|+.|+.+|+++|++++..
T Consensus 293 ~~~~i~~ldG~~i~v~Ip~-g~~~g~~iri~GkG~p~~~~-~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~~ 363 (369)
T PRK14282 293 TTVEVPLPEGGTTMLKIPP-GTQPETVFRLKGKGLPNMRY-GRRGDLIVNVHVEIPKRLSREERKLLKELAKK 363 (369)
T ss_pred CEEEEeCCCCcEEEEEeCC-CcCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHh
Confidence 9999999999889999999 99999999999999997543 56899999999999999999999999999864
No 24
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=1.7e-35 Score=278.82 Aligned_cols=177 Identities=21% Similarity=0.337 Sum_probs=161.2
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEee-ceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQD-EEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~-~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
+++.|+.+.+.|+|+|++.||.+++.+.+.++|..|.+.++ .++++|.||+|+++|++|+++|+|++..++ .+|||+|
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v 194 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWL 194 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEE
Confidence 46899999999999999999999999988777655533222 358999999999999999999999987654 6899999
Q ss_pred EEEEeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEE
Q 036222 193 LIAEKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKL 272 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI 272 (298)
+|++++|+.|+|+|+||+++++|+|.+|++|+++.|+|++|+ +.|.||+ ++++|++++|+|+|||.. +.+|||||
T Consensus 195 ~i~v~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~-g~~~g~~~ri~g~G~p~~---~~~GdL~v 269 (306)
T PRK10266 195 VIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPP-GSQAGQRLRVKGKGLVSK---KQTGDLYA 269 (306)
T ss_pred EEEEcCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCC-CcCCCCEEEECCCCCCCC---CCCCCEEE
Confidence 999999999999999999999999999999999999999998 8999999 999999999999999975 35899999
Q ss_pred EEEEECCCCCCHHHHHHHHhhhhh
Q 036222 273 LFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 273 ~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+|+|.+|++|+++|+++|++|+..
T Consensus 270 ~~~v~~P~~l~~~q~~l~~~l~~~ 293 (306)
T PRK10266 270 VLKIVMPPKPDEKTAALWQQLADA 293 (306)
T ss_pred EEEEECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999864
No 25
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1.8e-35 Score=283.68 Aligned_cols=221 Identities=24% Similarity=0.402 Sum_probs=187.6
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCC------CC-CEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVK------PP-AVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~k------g~-di~~~l~vsLeea~~G~~k~I~ 140 (298)
.-+|.+++.|+..+++....+.|..|.+.+...+.....|..|.|.... +. -+.....|+ .|.|.-+
T Consensus 124 ~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~---~C~G~G~--- 197 (354)
T TIGR02349 124 ELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCP---TCGGEGK--- 197 (354)
T ss_pred EEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecC---CCCCcce---
Confidence 4689999999999999999999999999998877777889999876321 11 112222222 4444433
Q ss_pred Eeeee--ecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEEEEEeccCcccccccceeEEEEECh
Q 036222 141 ITRDA--ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFLIAEKRHHLFRRDGDDLELAVEIPL 217 (298)
Q Consensus 141 i~r~~--~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl 217 (298)
+.+.. .|...+++.+.++++|.||+|+++|++|+|+|+|++.+.+ .+|||+|+|++++|+.|+|+|+||++++.|+|
T Consensus 198 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl 277 (354)
T TIGR02349 198 IIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISF 277 (354)
T ss_pred ecCCCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCH
Confidence 33333 3666778999999999999999999999999999986544 78999999999999999999999999999999
Q ss_pred hhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhhc
Q 036222 218 VKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILEDC 297 (298)
Q Consensus 218 ~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~~ 297 (298)
.+||+|+++.|+|||| .+.|.||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.|+.+|+++|+++|+.+
T Consensus 278 ~eAl~G~~~~i~~ldG-~i~v~ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~~~ 354 (354)
T TIGR02349 278 TQAILGGEIEVPTLDG-DVKLKIPA-GTQSGTVFRLKGKGVPRLRG-NGRGDLLVTVKVETPKNLSKEQKELLEELAEAS 354 (354)
T ss_pred HHHhCCCeEEEecCCc-eEEEEECC-cccCCcEEEECCCCcCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHhhC
Confidence 9999999999999999 58999999 99999999999999997653 478999999999999999999999999999764
No 26
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-35 Score=284.08 Aligned_cols=227 Identities=22% Similarity=0.289 Sum_probs=187.4
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEE-EEEEehHhHhcCcEEEEEEeeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEK-KLECTLEELCFGCTKKIKITRDAI 146 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~-~l~vsLeea~~G~~k~I~i~r~~~ 146 (298)
.-+|.+++.|+..++++...+.|..|.+.+...+..+..|..|.|....-.-... .-.++....|..|...-.+.+..|
T Consensus 124 ~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C 203 (374)
T PRK14293 124 KLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPC 203 (374)
T ss_pred EeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCC
Confidence 3689999999999999999999999998888777767789999877321000000 001111224444444444444333
Q ss_pred --cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 147 --TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 147 --c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
|...+++.+.++++|.||+|+++|++|+|+|+|++... ..+|||+|+|++++|+.|+|+|+||+++++|+|.+|++|
T Consensus 204 ~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G 283 (374)
T PRK14293 204 DACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILG 283 (374)
T ss_pred CCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCC
Confidence 66667888889999999999999999999999998654 468999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+++.|+|+||+ ++|.||+ ++++|++++|+|+|||...+++.+|||||+|+|.||+.|+++|+++|+++++.
T Consensus 284 ~~~~i~~ldG~-~~i~ip~-~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~~ 354 (374)
T PRK14293 284 DTLEVDTVDGP-VELTIPA-GTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAKI 354 (374)
T ss_pred CEEEecCCCCC-EEEEeCC-CCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHhh
Confidence 99999999997 7999999 89999999999999998755457899999999999999999999999999863
No 27
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4e-35 Score=274.52 Aligned_cols=161 Identities=29% Similarity=0.442 Sum_probs=150.4
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFL 193 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~ 193 (298)
+++|.|+++.+.|||+|+|.||++++.+. .++++|+||+|+++|++|+++|+|++. |||+|+
T Consensus 126 ~~~g~dl~~~l~isL~ea~~G~~~~i~l~-------------g~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~ 187 (291)
T PRK14299 126 ARKGRDLEAELPLTLEEAYRGGEKVVEVA-------------GERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLV 187 (291)
T ss_pred CCCCCCEEEEEEecHHHHhCCCeEEEeeC-------------CEEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEE
Confidence 46799999999999999999999998764 357999999999999999999999863 999999
Q ss_pred EEEeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEE
Q 036222 194 IAEKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLL 273 (298)
Q Consensus 194 I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~ 273 (298)
|++++|+.|+|+|+||++++.|+|.+|++|+++.|+|+||. +.|+||+ ++++|++++|+|+|||.. ++.+|||||+
T Consensus 188 i~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~-~~~~g~~~rl~g~G~p~~--~~~~GDL~v~ 263 (291)
T PRK14299 188 VRLLPHPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPP-RTQAGRKLRLKGKGWPRG--PAGRGDQYAE 263 (291)
T ss_pred EEEcCCCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCC-CcCCCCEEEECCCCCCCC--CCCCCCEEEE
Confidence 99999999999999999999999999999999999999997 8999999 999999999999999963 3578999999
Q ss_pred EEEECCCCCCHHHHHHHHhhhhh
Q 036222 274 FLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 274 f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
|+|.||+.|+++|+++|++++..
T Consensus 264 ~~V~~P~~l~~~~~~~l~~l~~~ 286 (291)
T PRK14299 264 VRITIPTRPTPEEERLYKQLAEL 286 (291)
T ss_pred EEEECCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999864
No 28
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.4e-35 Score=279.79 Aligned_cols=219 Identities=20% Similarity=0.290 Sum_probs=183.5
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEEE-----EEehHhHhcCcEEEEEEe
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKKL-----ECTLEELCFGCTKKIKIT 142 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~l-----~vsLeea~~G~~k~I~i~ 142 (298)
..+|.+++.|+..+++......|..|.+++...+ .+..|..|.|.... +... .......|.-|..+-.+.
T Consensus 130 ~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~-~~~~C~~C~G~G~~----~~~~~~g~~~~~~~~~C~~C~G~G~~~ 204 (365)
T PRK14290 130 DISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNG-KLITCPTCHGTGQQ----RIVRGQGFFRMVTVTTCRTCGGRGRIP 204 (365)
T ss_pred EecHHHhcCCEEEEEEeeecccCCCCccccCCCC-CCccCCCCCCcCEE----EEEeccCeEEEEEEEeCCCCCCceeEc
Confidence 3689999999999999999999999999887664 56789999876321 1100 000112233333333333
Q ss_pred eeee--cCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhhh
Q 036222 143 RDAI--TSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKA 220 (298)
Q Consensus 143 r~~~--c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eA 220 (298)
+..| |...+++.+.++++|.||+|+.+|++|+|+|+|++ +++.+|||+|+|++++|+.|+|+|+||++++.|+|.+|
T Consensus 205 ~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eA 283 (365)
T PRK14290 205 EEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQA 283 (365)
T ss_pred cCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHH
Confidence 3333 66678899999999999999999999999999986 56689999999999999999999999999999999999
Q ss_pred cCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 221 LTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 221 l~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
++|+++.|+|++|. ++|.||+ ++++|++++|+|+|||...+ +.+|||||+|+|.+|+.|+++|+++|+++|+
T Consensus 284 l~G~~~~I~~~~g~-i~V~Ip~-g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~ 355 (365)
T PRK14290 284 ALGGEIEIKLFREK-YNLKIPE-GTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFD 355 (365)
T ss_pred hCCCEEEEEcCCce-EEEEECC-ccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999999996 8999999 99999999999999997653 4689999999999999999999999999986
No 29
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-35 Score=283.11 Aligned_cols=221 Identities=20% Similarity=0.331 Sum_probs=186.0
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCC-------CEEEEEEEehHhHhcCcEEEEE
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPP-------AVEKKLECTLEELCFGCTKKIK 140 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~-------di~~~l~vsLeea~~G~~k~I~ 140 (298)
.-+|.+++.|+..+++......|..|.+.+...+..+..|..|.|....-. -+.....|+ .|.|.-+.+.
T Consensus 127 ~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~---~C~G~G~~~~ 203 (378)
T PRK14283 127 EITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCP---DCQGEGKIVE 203 (378)
T ss_pred eeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECC---CCCccceecC
Confidence 468999999999999999999999999999887777789999987733210 111122222 4444433321
Q ss_pred EeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 141 ITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 141 i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
.....|...+++.+.++++|.||+|+++|++|+|+|+|++.+. +.+|||+|+|++++|+.|+|+|+||++++.|+|.+
T Consensus 204 -~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~e 282 (378)
T PRK14283 204 -KPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQ 282 (378)
T ss_pred -CCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHH
Confidence 1222366667888999999999999999999999999998654 47899999999999999999999999999999999
Q ss_pred hcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 220 ALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 220 Al~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
|++|+++.|+|||| .+.|.||+ ++++|++++|+|+|||.... +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus 283 Al~G~~~~i~tldG-~i~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~ 355 (378)
T PRK14283 283 AALGDTVDVPTIDG-PVELKIPA-GTQSGTTFRLKGHGMPSLRW-SGKGNLYVKVKVVVPKKLSPKQKELLREFAS 355 (378)
T ss_pred HhcCCeEEEEcCCc-eEEEEeCC-CCCCCCEEEECCCCCCCCCC-CCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 99999999999999 58999999 99999999999999997643 4689999999999999999999999999985
No 30
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.6e-35 Score=282.75 Aligned_cols=226 Identities=19% Similarity=0.293 Sum_probs=187.8
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCCCCCCCEEEE-EEEehHhHhcCcEEEEEEeeee-
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIPVKPPAVEKK-LECTLEELCFGCTKKIKITRDA- 145 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~~kg~di~~~-l~vsLeea~~G~~k~I~i~r~~- 145 (298)
..+|.+++.|+..++++...+.|..|.+++...+..+..|..|.|....-...... -.+.....|.-|..+-.+....
T Consensus 135 ~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C 214 (386)
T PRK14289 135 KLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKC 214 (386)
T ss_pred EEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCC
Confidence 36899999999999999999999999999987777778899998763221000000 0111233444444443333333
Q ss_pred -ecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCC-CCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 146 -ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVP-GTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 146 -~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~-~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
.|...+++.+.++++|.||+|+++|++|+|+|+|++.+ +..+|||+|+|.+++|+.|.|+|+||++++.|+|.+|++|
T Consensus 215 ~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G 294 (386)
T PRK14289 215 KKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALG 294 (386)
T ss_pred CCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCC
Confidence 36666788899999999999999999999999999875 4478999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
+++.|+|+||+ +.|.||+ ++++|++++|+|+|||...+ +.+|||||+|+|.||+.|+++|+++|++|++.
T Consensus 295 ~~~~i~~ldg~-i~v~ip~-g~~~g~~~ri~g~G~p~~~~-~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~~ 364 (386)
T PRK14289 295 GAVEVPTIDGK-AKVKIEA-GTQPGKVLRLRNKGLPSVNG-YGTGDLLVNVSVYIPETLSKEEKQTLEKMENS 364 (386)
T ss_pred CeEEeecCCce-EEEEECC-ccCCCcEEEECCCCcCCCCC-CCCCcEEEEEEEEeCCCCCHHHHHHHHHHHhh
Confidence 99999999997 8999999 99999999999999997654 46899999999999999999999999999974
No 31
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3e-34 Score=276.82 Aligned_cols=224 Identities=21% Similarity=0.304 Sum_probs=183.6
Q ss_pred CchhhhhcccceeEeecCCCCCccccCcCcCCCCCC-CccccCCCCCCCCCCCEEE-EEEEehHhHhcCcEEEEEEeeee
Q 036222 68 PSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTT-PIMYSNSTGIPVKPPAVEK-KLECTLEELCFGCTKKIKITRDA 145 (298)
Q Consensus 68 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~fs~~~g~~~kg~di~~-~l~vsLeea~~G~~k~I~i~r~~ 145 (298)
..+|.+++.|+..++++.....|..|.+++...+.. +..|..|.|....-.-... .-.+.....|.-|...-......
T Consensus 120 ~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~ 199 (371)
T PRK14292 120 RITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDP 199 (371)
T ss_pred eccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCC
Confidence 368999999999999999999999999998766654 4788888776321100000 00111123344444443333333
Q ss_pred --ecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCC
Q 036222 146 --ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTG 223 (298)
Q Consensus 146 --~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G 223 (298)
.|...+++.+.++++|.||+|+.+|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+||++.+.|+|.+|++|
T Consensus 200 C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G 278 (371)
T PRK14292 200 CTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALG 278 (371)
T ss_pred CCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHHHHhCC
Confidence 36666788888999999999999999999999999877655 999999999999999999999999999999999999
Q ss_pred CeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhh
Q 036222 224 CTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 224 ~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
+++.|+||||+ +.|.||+ ++++|++++|+|+|||...+ ..+|||||+|+|.||+.|+++|+++|++++.
T Consensus 279 ~~~~i~tldG~-~~v~ip~-g~~~g~~~~i~g~G~p~~~~-~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 347 (371)
T PRK14292 279 GQITVPTLDGP-QVIEVKP-GTQHGDLHRLRGQGMPRLQG-AGTGDLIVEYEIAVPKQLSPEAREALEAYAR 347 (371)
T ss_pred CeEEEECCCCC-EEEecCC-CcCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999998 4899999 99999999999999997653 4689999999999999999999999999985
No 32
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=3.2e-32 Score=274.95 Aligned_cols=159 Identities=16% Similarity=0.155 Sum_probs=145.7
Q ss_pred CCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCC-cEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEE
Q 036222 117 PPAVEKKLECTLEELCFGCTKKIKITRDAITSSG-QLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIA 195 (298)
Q Consensus 117 g~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G-~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~ 195 (298)
.-+|.+.++|+|+++|+||+++|++.|.++|+.| ..+.+.++++|+||+|+.+|++|+|+|+|+.++++. |||||+|+
T Consensus 656 ~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIk 734 (871)
T TIGR03835 656 NVNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFK 734 (871)
T ss_pred ccceEEecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEE
Confidence 5689999999999999999999999999988655 456677899999999999999999999999876554 99999999
Q ss_pred EeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEE
Q 036222 196 EKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFL 275 (298)
Q Consensus 196 vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~ 275 (298)
+++|+.|+|+|+|||+.+.|+|.+||+|+++.|+||||+ +.|+||+ ++++|++++|+|+|||... +.||||||+|.
T Consensus 735 VKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPp-gTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~ 810 (871)
T TIGR03835 735 VIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPG-GIKVNDQVIFKDLGLTKTK--YDKGSLIVHLY 810 (871)
T ss_pred EcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCC-CCCCCcEEEECCCCCCCCC--CCCCCEEEEEE
Confidence 999999999999999999999999999999999999997 8999999 9999999999999999542 56899999999
Q ss_pred EE-CCC
Q 036222 276 VD-FPT 280 (298)
Q Consensus 276 V~-~P~ 280 (298)
|. +++
T Consensus 811 V~~~~k 816 (871)
T TIGR03835 811 YSSVMK 816 (871)
T ss_pred Eeeccc
Confidence 97 444
No 33
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=4.1e-30 Score=241.96 Aligned_cols=177 Identities=38% Similarity=0.652 Sum_probs=164.0
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCC---------------------------------------------
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSS--------------------------------------------- 149 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~--------------------------------------------- 149 (298)
.+|+|+.+.+.|+|+|+|.|.++++.++++.+|..
T Consensus 98 ~rg~~~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~ 177 (337)
T KOG0712|consen 98 QRGKDVVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCN 177 (337)
T ss_pred ccCCCceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCC
Confidence 34999999999999999999999999999887630
Q ss_pred --C---------------cEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEE
Q 036222 150 --G---------------QLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELA 212 (298)
Q Consensus 150 --G---------------~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~ 212 (298)
| +++.+.+.++|.|++|..++++|.+.|++++.++..+||++|.|..++|+.|.|.|+||++.
T Consensus 178 G~G~~~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~ 257 (337)
T KOG0712|consen 178 GSGETISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRK 257 (337)
T ss_pred CccccccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceeccccccee
Confidence 0 35778899999999999999999999999998888899999999999999999999999999
Q ss_pred EEEChhhhcCCCeEEEeCCCCcEEEEEcCC-ccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 036222 213 VEIPLVKALTGCTISVPLLGGEKMDLSIDD-EIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVL 291 (298)
Q Consensus 213 ~~Isl~eAl~G~~i~I~tldG~~i~v~ip~-~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~ 291 (298)
..|++.+|++|+.+.+.||||+.+.+.+++ +++++|+.++|+|+|||...++ +|||||+|+|+||+ +++++...|+
T Consensus 258 ~~i~l~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~ 334 (337)
T KOG0712|consen 258 LTISLVEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLE 334 (337)
T ss_pred eecchhhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHH
Confidence 999999999999999999999999998755 7899999999999999999875 99999999999999 9999999998
Q ss_pred hhh
Q 036222 292 GIL 294 (298)
Q Consensus 292 ~il 294 (298)
.+|
T Consensus 335 ~~l 337 (337)
T KOG0712|consen 335 DLL 337 (337)
T ss_pred hhC
Confidence 875
No 34
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.88 E-value=6.2e-23 Score=157.39 Aligned_cols=81 Identities=40% Similarity=0.639 Sum_probs=70.8
Q ss_pred ceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHH
Q 036222 208 DLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQR 287 (298)
Q Consensus 208 DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr 287 (298)
||+++++|+|++|++|++++|+|+||+.++|++|+ ++++|++++|+|+|||...+++.+|||||+|+|.||++||++||
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~-~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk 79 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPP-GTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQK 79 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETS-T-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccC-ccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHh
Confidence 79999999999999999999999999889999999 99999999999999999887668999999999999999999999
Q ss_pred HH
Q 036222 288 SN 289 (298)
Q Consensus 288 ~~ 289 (298)
++
T Consensus 80 ~l 81 (81)
T PF01556_consen 80 EL 81 (81)
T ss_dssp HH
T ss_pred cC
Confidence 86
No 35
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.4e-11 Score=115.82 Aligned_cols=170 Identities=31% Similarity=0.461 Sum_probs=142.6
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeee--------ecC-----------CC----------------cEEeeceE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDA--------ITS-----------SG----------------QLIQDEEV 158 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~--------~c~-----------~G----------------~~~~~~~~ 158 (298)
..+|.++...++.+++++|.|...+..-.+.+ .|. .| ++..+..+
T Consensus 123 ~~~g~~V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~ 202 (336)
T KOG0713|consen 123 LPKGSDVSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDP 202 (336)
T ss_pred CCCCceEEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCc
Confidence 34688999999999999998854331111111 111 01 35778899
Q ss_pred EEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEE
Q 036222 159 LSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDL 238 (298)
Q Consensus 159 l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v 238 (298)
+++.+..|..++....+..+|.+..-+.+||++|.+....|+.|.|+++++++++.+++.+++.|+..++.++|++.+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~ 282 (336)
T KOG0713|consen 203 LEVEFERGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEV 282 (336)
T ss_pred eeeeeeecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhh
Confidence 99999999999999999999988777789999999999999999999999999999999999999999999999986666
Q ss_pred EcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCC-CCH
Q 036222 239 SIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTE-LTD 284 (298)
Q Consensus 239 ~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~-Ls~ 284 (298)
.... +..|+..++.+++|||...+....|.++++|.+.+|.+ ++.
T Consensus 283 ~r~~-~~~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 283 SRKK-ITWPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hhhh-ccccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 6666 78999999999999998877788999999999999965 555
No 36
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=4.1e-09 Score=102.70 Aligned_cols=148 Identities=18% Similarity=0.217 Sum_probs=86.8
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCC--CcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEE
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSS--GQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIF 192 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~--G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v 192 (298)
.++.|+++.+.|+|+|+|+|+++++.+.+.+.|.. |. |..++.....--.. ...|.+..
T Consensus 125 ~~g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~--------------G~~~~~~~~~C~~C-----~G~G~~~~ 185 (386)
T PRK14289 125 FRGSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGT--------------GAEGNNGSETCPTC-----KGSGSVTR 185 (386)
T ss_pred CCCCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCC--------------CCCCCCCCCcCCCC-----cCeEEEEE
Confidence 46889999999999999999999999999887741 10 11111111000000 00111111
Q ss_pred EEE--------EeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCC
Q 036222 193 LIA--------EKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPE 264 (298)
Q Consensus 193 ~I~--------vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~ 264 (298)
... ..+=+...=.|.-+ . ..-.. |++.-.+. +.+.++|.||+ ++++|++++|+|+|+|...+
T Consensus 186 ~~~~~~G~~~~~~~C~~C~G~G~~~--~---~~C~~-C~G~g~v~--~~~~~~V~Ip~-G~~~G~~i~l~g~G~~~~~~- 255 (386)
T PRK14289 186 VQNTILGTMQTQSTCPTCNGEGKII--K---KKCKK-CGGEGIVY--GEEVITVKIPA-GVAEGMQLSMNGKGNAGKHG- 255 (386)
T ss_pred EEecccceEEEEEecCCCCcccccc--C---cCCCC-CCCCcEEe--eeEEEEEEeCC-CCCCCCEEEEeccccCCCCC-
Confidence 110 11111111111100 0 00111 22222221 22468999999 99999999999999997543
Q ss_pred CCCCcEEEEEEEECCCCCCHHHHHHHH
Q 036222 265 GARGNLKLLFLVDFPTELTDEQRSNVL 291 (298)
Q Consensus 265 ~~rGDLiI~f~V~~P~~Ls~~qr~~l~ 291 (298)
+.+|||||+|+|..|+.+..+...++.
T Consensus 256 ~~~GDL~v~v~v~~~~~f~r~g~DL~~ 282 (386)
T PRK14289 256 GVNGDLLVVIEEEPHPELIRDENDLIY 282 (386)
T ss_pred CCCccEEEEEEEecCCcccccccceeE
Confidence 568999999999999998877766544
No 37
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=7.7e-10 Score=107.17 Aligned_cols=87 Identities=15% Similarity=0.189 Sum_probs=75.8
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCC-CCCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPG-TQPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~-~~~GDL~v 192 (298)
.++|.|+++++.|+|.||+.|+++.|... ..++++|+||+|+++|++++|+|+|.+..+ +.+|||||
T Consensus 272 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------------dG~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V 339 (369)
T PRK14282 272 KRSGSDLIYDVTIDYLQAILGTTVEVPLP------------EGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIV 339 (369)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEeCC------------CCcEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999988764 234789999999999999999999998643 36899999
Q ss_pred EEEEeccCcccccccceeEE
Q 036222 193 LIAEKRHHLFRRDGDDLELA 212 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~ 212 (298)
+|.+..|+.|.+++.+|+..
T Consensus 340 ~~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 340 NVHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999999999999888744
No 38
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.02 E-value=5.8e-10 Score=85.36 Aligned_cols=74 Identities=23% Similarity=0.358 Sum_probs=57.6
Q ss_pred CEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC--CCccEEEEEEE
Q 036222 119 AVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT--QPADIIFLIAE 196 (298)
Q Consensus 119 di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~--~~GDL~v~I~v 196 (298)
|++++++|+|.||+.|++++|... ..+.++|.||+|+++|+.++++|+|.+...+ .+|||||++++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l------------~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL------------DGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T------------TS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC------------CCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 689999999999999999988765 2358999999999999999999999965433 69999999999
Q ss_pred eccCcccc
Q 036222 197 KRHHLFRR 204 (298)
Q Consensus 197 k~h~~F~R 204 (298)
.-+..+..
T Consensus 69 ~~P~~ls~ 76 (81)
T PF01556_consen 69 EFPKKLSP 76 (81)
T ss_dssp E--SSTSH
T ss_pred ECCCCCCH
Confidence 86665543
No 39
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.96 E-value=1.7e-09 Score=104.57 Aligned_cols=86 Identities=14% Similarity=0.183 Sum_probs=76.0
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|.+|+.|++++|... ..+++|+||+|+++|++++++|+|.+.+++ .+|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~I~~~-------------~g~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V 332 (365)
T PRK14290 266 QRINDDLYVDQKINFPQAALGGEIEIKLF-------------REKYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLV 332 (365)
T ss_pred EEecCCEEEEEEeCHHHHhCCCEEEEEcC-------------CceEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999988764 236999999999999999999999986654 6899999
Q ss_pred EEEEeccCcccccccceeEE
Q 036222 193 LIAEKRHHLFRRDGDDLELA 212 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~ 212 (298)
+|+|..++.|.+++.+|+.+
T Consensus 333 ~~~V~~P~~l~~~~~~ll~~ 352 (365)
T PRK14290 333 RINVEVPKRLTSKQKELIRE 352 (365)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999999999999888755
No 40
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.93 E-value=3.5e-09 Score=99.50 Aligned_cols=73 Identities=26% Similarity=0.358 Sum_probs=65.8
Q ss_pred ccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCC
Q 036222 202 FRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTE 281 (298)
Q Consensus 202 F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~ 281 (298)
+.|+|.|+++.+.|+|.||++|+++.| +++|+.++|+||+ ++++|+.++++|+|++. |||||+|+|.-+..
T Consensus 125 ~~~~g~dl~~~l~isL~ea~~G~~~~i-~l~g~~~~V~Ip~-G~~~G~~ir~~g~G~~~-------GDL~v~i~v~~h~~ 195 (291)
T PRK14299 125 RARKGRDLEAELPLTLEEAYRGGEKVV-EVAGERLSVRIPP-GVREGQVIRLAGKGRQG-------GDLYLVVRLLPHPV 195 (291)
T ss_pred CCCCCCCEEEEEEecHHHHhCCCeEEE-eeCCEEEEEecCC-CcCCCcEEEECCCCCCC-------CCEEEEEEEcCCCC
Confidence 357899999999999999999999998 7888889999999 99999999999999862 99999999987765
Q ss_pred CC
Q 036222 282 LT 283 (298)
Q Consensus 282 Ls 283 (298)
+.
T Consensus 196 f~ 197 (291)
T PRK14299 196 FR 197 (291)
T ss_pred eE
Confidence 43
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.92 E-value=2e-08 Score=97.54 Aligned_cols=56 Identities=18% Similarity=0.286 Sum_probs=48.2
Q ss_pred cEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHH
Q 036222 234 EKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVL 291 (298)
Q Consensus 234 ~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~ 291 (298)
+.+.|.||+ ++++|++++|+|+|++...+ +.+|||||+|+|..|..++.++..++.
T Consensus 216 ~~~~V~Ipp-G~~~G~~i~l~g~G~~~~~~-~~~GDL~v~v~v~~~~~f~r~g~DL~~ 271 (374)
T PRK14293 216 KKLKINIPA-GVDTGTRLRVSGEGDAGLRG-GPPGDLYVYLFVKNDPEFRRDGINILS 271 (374)
T ss_pred eEEEEEeCC-CCCCCCEEEEccCccCCCCC-CCCcCEEEEEEEeCCCccChhhhceEE
Confidence 457899999 99999999999999986543 457999999999999999988876654
No 42
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=3.5e-09 Score=102.46 Aligned_cols=86 Identities=17% Similarity=0.229 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++++.|+|.+|+.|++++|... .| .++|+||+|+.+|++++|+|+|++.++. .+|||||
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V 326 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII 326 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999888754 12 4699999999999999999999986654 6899999
Q ss_pred EEEEeccCcccccccceeEE
Q 036222 193 LIAEKRHHLFRRDGDDLELA 212 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~ 212 (298)
+|++..++.|.+++.+|+..
T Consensus 327 ~~~v~~P~~l~~~q~~ll~~ 346 (366)
T PRK14294 327 EVEVKVPTRLTKKQEELLTE 346 (366)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999999999988877754
No 43
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=4.3e-09 Score=101.87 Aligned_cols=85 Identities=16% Similarity=0.223 Sum_probs=74.2
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEEE
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIFL 193 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v~ 193 (298)
++|.|++++++|+|.||+.|++++|... ..++++|.||+|+.+|++++|+|+|++.++. ..|||||+
T Consensus 263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------------dG~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~ 330 (365)
T PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTI------------ASKKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI 330 (365)
T ss_pred EeccceEEEEecCHHHHhCCCEEEEECC------------CCCEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence 5688999999999999999999988765 2347999999999999999999999986655 46999999
Q ss_pred EEEeccCcccccccceeE
Q 036222 194 IAEKRHHLFRRDGDDLEL 211 (298)
Q Consensus 194 I~vk~h~~F~R~G~DL~~ 211 (298)
|.++.++.|.+++..++-
T Consensus 331 ~~v~~P~~l~~~q~~~l~ 348 (365)
T PRK14285 331 IKIKTPKNLNSNAIKLLE 348 (365)
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 999999999988876653
No 44
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=6.4e-09 Score=101.52 Aligned_cols=87 Identities=15% Similarity=0.205 Sum_probs=73.4
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|+||+.|++++|... . +...++|+||+|+++|++++|+|+|.+..+. .+|||||
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d-----~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 342 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL------L-----KEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLV 342 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec------C-----CCcEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEEE
Confidence 46689999999999999999999988754 1 1247899999999999999999999986643 6899999
Q ss_pred EEEEeccCcccccccceeE
Q 036222 193 LIAEKRHHLFRRDGDDLEL 211 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~ 211 (298)
+|++..++.+..+...|+.
T Consensus 343 ~~~v~~P~~l~~~q~~ll~ 361 (391)
T PRK14284 343 RISVETPQNLSEEQKELLR 361 (391)
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 9999998888877766553
No 45
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=6.3e-09 Score=100.86 Aligned_cols=87 Identities=11% Similarity=0.183 Sum_probs=75.0
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++++.|+|.+|+.|++++|... .| .++|.||+|+.+|++++++|+|.+..+. .+|||||
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v 324 (371)
T PRK10767 258 ERDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYC 324 (371)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence 35689999999999999999999888654 12 6899999999999999999999986543 6799999
Q ss_pred EEEEeccCcccccccceeEEE
Q 036222 193 LIAEKRHHLFRRDGDDLELAV 213 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~~ 213 (298)
+|+|..++.|.+++.+|+.++
T Consensus 325 ~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 325 QVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999998887543
No 46
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=5.7e-09 Score=101.42 Aligned_cols=87 Identities=10% Similarity=0.164 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++++.|+|.||+.|+++.|... .| .++|+||+|+++|++++++|+|.+..++ .+|||||
T Consensus 261 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V 327 (377)
T PRK14298 261 ERVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLV 327 (377)
T ss_pred EEEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999888764 12 3799999999999999999999986544 5799999
Q ss_pred EEEEeccCcccccccceeEEE
Q 036222 193 LIAEKRHHLFRRDGDDLELAV 213 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~~~ 213 (298)
+|+|..++.|.+++.+|+.++
T Consensus 328 ~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 328 KVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999988777543
No 47
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=1.3e-07 Score=91.90 Aligned_cols=151 Identities=17% Similarity=0.219 Sum_probs=85.2
Q ss_pred ccccCCCC-------CCCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecC-CCcEEeeceEEEEEeCCCCccCcEEEEc
Q 036222 105 IMYSNSTG-------IPVKPPAVEKKLECTLEELCFGCTKKIKITRDAITS-SGQLIQDEEVLSIKVKPGWKKGTKITFE 176 (298)
Q Consensus 105 ~~fs~~~g-------~~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~-~G~~~~~~~~l~V~IP~G~~dG~~Irl~ 176 (298)
++|+.++| .+.+++|+++.+.|+|+|+|+|++++|.+.+.+.|. |.+ .|..++..+..-
T Consensus 103 d~f~~~fggg~~~~~~~~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G-------------~G~~~~~~~~~C 169 (372)
T PRK14296 103 NIFSDFFGSNKSDYQRSTKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFG-------------SGAESNSDIHIC 169 (372)
T ss_pred hhhhhhcCCCccCCCCcCCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCC-------------CccCCCCCCccC
Confidence 56666433 134689999999999999999999999999988775 111 022222211110
Q ss_pred cCccCCCCCCCccEEEEEEE-------e-ccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCC
Q 036222 177 GKGNEVPGTQPADIIFLIAE-------K-RHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPG 248 (298)
Q Consensus 177 g~G~~~~~~~~GDL~v~I~v-------k-~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G 248 (298)
.. . ...|-++...++ . +=+.. .|.--... ..-..-.|.. .+ ...+.++|.||+ ++++|
T Consensus 170 ~~--C---~G~G~~~~~~~~g~~~~q~~~~C~~C--~G~G~~~~---~~C~~C~G~g-~v--~~~~~~~V~Ip~-G~~~G 235 (372)
T PRK14296 170 NN--C---HGTGEVLVQKNMGFFQFQQSAKCNVC--NGAGKIIK---NKCKNCKGKG-KY--LERKKIEVNIPK-GIRPN 235 (372)
T ss_pred CC--C---CCCceEEEEEeccceEEEEEecCCCc--CCcceeec---ccccCCCCce-EE--EEEEEEEEEECC-CCCCC
Confidence 00 0 011211111110 0 00000 11110000 0011111211 11 122568999999 99999
Q ss_pred cEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCC
Q 036222 249 YVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELT 283 (298)
Q Consensus 249 ~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls 283 (298)
++++++|+|.+...+ +..|||||+|+|.-...+.
T Consensus 236 ~~i~~~g~G~~~~~~-~~~GDL~v~v~v~~h~~F~ 269 (372)
T PRK14296 236 QQIKLSQKGHASLNN-GVNGDLIIDIYLKESKVFE 269 (372)
T ss_pred CEEEEeccccCCCCC-CCCccEEEEEEEeCCCCEE
Confidence 999999999987533 5689999999998666554
No 48
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.81 E-value=1.1e-08 Score=98.34 Aligned_cols=84 Identities=13% Similarity=0.214 Sum_probs=70.9
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|.|.|++++++|+|.+|..|.+++|... .| .++|+||+|++.|+.++|+|+|.+...+ ..|||||
T Consensus 260 ~R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v 326 (371)
T COG0484 260 ERDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYV 326 (371)
T ss_pred EECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEE
Confidence 35578999999999999999998888865 22 3999999999999999999999987555 6799999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
.|.|..+..+..+...|+
T Consensus 327 ~v~v~~P~~ls~~q~~lL 344 (371)
T COG0484 327 RVKVETPKNLSDEQKELL 344 (371)
T ss_pred EEEEEcCCCCCHHHHHHH
Confidence 999998887766555444
No 49
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=1.1e-08 Score=99.33 Aligned_cols=85 Identities=14% Similarity=0.187 Sum_probs=72.4
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|.+|+.|++++|... .| .++|+||+|+++|++++++|+|.+..++ .+|||||
T Consensus 258 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14287 258 ERDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHV 324 (371)
T ss_pred EEecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEE
Confidence 36689999999999999999999888754 12 4899999999999999999999986544 5799999
Q ss_pred EEEEeccCcccccccceeE
Q 036222 193 LIAEKRHHLFRRDGDDLEL 211 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~~ 211 (298)
+|+|..++.+.++...|+.
T Consensus 325 ~~~v~~P~~l~~~q~~ll~ 343 (371)
T PRK14287 325 QVRVVTPKNLTEKEKELMR 343 (371)
T ss_pred EEEEEcCCCCCHHHHHHHH
Confidence 9999999888877765553
No 50
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.79 E-value=1.4e-08 Score=97.75 Aligned_cols=84 Identities=13% Similarity=0.230 Sum_probs=71.8
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++.+.|+|+||+.|+++.|... .| +++|.||+|+.+|++++++|+|.+..++ .+|||||
T Consensus 263 ~r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i 329 (354)
T TIGR02349 263 ERDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLV 329 (354)
T ss_pred EEecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEE
Confidence 35688999999999999999998887654 12 6899999999999999999999986655 6899999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|+|..++.+..+...++
T Consensus 330 ~~~v~~P~~l~~~~~~~l 347 (354)
T TIGR02349 330 TVKVETPKNLSKEQKELL 347 (354)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999888887766543
No 51
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.77 E-value=1.8e-08 Score=97.85 Aligned_cols=84 Identities=13% Similarity=0.234 Sum_probs=71.3
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|++++++|+|.+|+.|++++|... .| .++|+||+|+++|++++|+|+|.+.++. .+|||||
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I 326 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV 326 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999888754 12 4899999999999999999999986654 5899999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|.|..++.+..+..+++
T Consensus 327 ~~~V~~P~~l~~~q~~~l 344 (373)
T PRK14301 327 EVSVVTPTKLTKRQEELL 344 (373)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998887776665554
No 52
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.77 E-value=1.8e-08 Score=97.74 Aligned_cols=85 Identities=13% Similarity=0.227 Sum_probs=71.8
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++++.|+|.+|+.|+++.|... ..+.++|+||+|+++|++++++|+|.+.+++ .+|||||
T Consensus 261 ~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------------dg~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V 328 (372)
T PRK14300 261 KVDGANLHCKLPISFVNAALGGEIEVPVI------------EGGKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLT 328 (372)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------------CCCEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999888764 1247999999999999999999999986554 6899999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|++..+..+.-+...++
T Consensus 329 ~~~v~~P~~ls~~qk~~l 346 (372)
T PRK14300 329 HIHVEVPKNLSKRQRELL 346 (372)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998887776555444
No 53
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.77 E-value=2.6e-08 Score=94.23 Aligned_cols=74 Identities=27% Similarity=0.521 Sum_probs=62.1
Q ss_pred ccccceeEEEEEChhhhcCCCeEEE----eCCC--C-------cEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcE
Q 036222 204 RDGDDLELAVEIPLVKALTGCTISV----PLLG--G-------EKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNL 270 (298)
Q Consensus 204 R~G~DL~~~~~Isl~eAl~G~~i~I----~tld--G-------~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDL 270 (298)
++|.|+++.+.|+|.||+.|+..+| +.++ | +.++|.||+ ++++|++++++|+|+|...+ +.+|||
T Consensus 115 ~kg~di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~-G~~~G~~i~~~g~G~~~~~~-~~~GDl 192 (306)
T PRK10266 115 ARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPA-GVGNGQRIRLKGQGTPGENG-GPNGDL 192 (306)
T ss_pred CCCCceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECC-CCcCCcEEEEecCCcCCCCC-CCCccE
Confidence 4689999999999999999995543 5454 3 468889999 99999999999999997543 568999
Q ss_pred EEEEEEECCC
Q 036222 271 KLLFLVDFPT 280 (298)
Q Consensus 271 iI~f~V~~P~ 280 (298)
||+|+|. |.
T Consensus 193 ~v~i~v~-ph 201 (306)
T PRK10266 193 WLVIHIA-PH 201 (306)
T ss_pred EEEEEEc-CC
Confidence 9999999 54
No 54
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.75 E-value=2.3e-08 Score=97.69 Aligned_cols=83 Identities=13% Similarity=0.216 Sum_probs=69.1
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFL 193 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~ 193 (298)
.++|.|+++++.|+|.+|+.|.++.|... ...++|+||+|+++|++++++|+|.+..++.+|||||+
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l-------------dg~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~ 355 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPTL-------------DGPVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT 355 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEcC-------------CceEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 46689999999999999999999887754 22589999999999999999999998655568999999
Q ss_pred EEEeccCcccccccce
Q 036222 194 IAEKRHHLFRRDGDDL 209 (298)
Q Consensus 194 I~vk~h~~F~R~G~DL 209 (298)
|+|.-+..+..+...+
T Consensus 356 ~~v~~P~~Ls~~q~~~ 371 (392)
T PRK14279 356 VKVAVPPNLDGAAAEA 371 (392)
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999776555444433
No 55
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.75 E-value=2.2e-08 Score=97.10 Aligned_cols=85 Identities=12% Similarity=0.175 Sum_probs=71.9
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|++++++|+|.||+.|+++.|... ..+.++|+||+|+++|++++++|+|.+.++. .+|||||
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------------dG~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v 321 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------------KGDELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV 321 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeecC------------CCCEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999888765 2346899999999999999999999986654 4699999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|.|+.+..+..+...++
T Consensus 322 ~~~v~~P~~ls~~q~~~l 339 (369)
T PRK14288 322 ELQVIYPKSLNKEQQELL 339 (369)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999887776655443
No 56
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=2.9e-08 Score=96.86 Aligned_cols=82 Identities=13% Similarity=0.223 Sum_probs=68.5
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFL 193 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~ 193 (298)
.|+|.|++++++|+|.+|+.|++++|... ..++++|+||+|+++|++++++|+|.+..++.+|||||+
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~I~tl------------dG~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~ 349 (389)
T PRK14295 282 GRSGDNLTVTVPVTFPEAALGAEVRVPTL------------GGPPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVT 349 (389)
T ss_pred EEecCCEEEEEeecHHHHhCCCeEEEECC------------CCCEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEE
Confidence 35689999999999999999999888654 134799999999999999999999998655568999999
Q ss_pred EEEeccCccccccc
Q 036222 194 IAEKRHHLFRRDGD 207 (298)
Q Consensus 194 I~vk~h~~F~R~G~ 207 (298)
|.+.-+....-+..
T Consensus 350 ~~v~~P~~Ls~~qk 363 (389)
T PRK14295 350 VEVAVPKDLSGKAR 363 (389)
T ss_pred EEEECCCCCCHHHH
Confidence 99987765544443
No 57
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.71 E-value=3.6e-08 Score=95.67 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=71.0
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|.+|+.|+++.|... . .+.++|+||+|+++|++++++|+|.+..+. .+|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d------G~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V 333 (372)
T PRK14286 266 ERQGNDLILVRKISLAQAILGAEIEVPTI------D------GKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHV 333 (372)
T ss_pred EEecCCEEEEEEECHHHHhCCCEEEEeCC------C------CCEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEE
Confidence 35689999999999999999999887654 2 347999999999999999999999986544 5799999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|.|.-+..+..+...++
T Consensus 334 ~~~V~~P~~Ls~~qk~~l 351 (372)
T PRK14286 334 IVKIEIPKKITRRQRELI 351 (372)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998876666655444
No 58
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.70 E-value=6.9e-08 Score=94.05 Aligned_cols=75 Identities=19% Similarity=0.259 Sum_probs=65.2
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++.+.|+|+||+.|++++|... . .+.++|.||+|+++|++++|+|+|.+.++. .+|||||
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------d------G~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V 338 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPLL------D------GKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVV 338 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEecC------C------CCEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999988764 2 346899999999999999999999986654 6899999
Q ss_pred EEEEeccC
Q 036222 193 LIAEKRHH 200 (298)
Q Consensus 193 ~I~vk~h~ 200 (298)
+|.|.-+.
T Consensus 339 ~~~V~~P~ 346 (382)
T PRK14291 339 RVHIDVPK 346 (382)
T ss_pred EEEEEeCC
Confidence 99998664
No 59
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.69 E-value=3.9e-08 Score=95.67 Aligned_cols=83 Identities=13% Similarity=0.164 Sum_probs=68.9
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++.++|+|.||+.|++++|... ...++|+||+|+++|++++++|+|.+..+. .+|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl-------------dg~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 332 (380)
T PRK14276 266 ERDGSTIYYTLPISFVQAALGDTVEVPTV-------------HGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHV 332 (380)
T ss_pred eeecceEEEEEecCHHHHhCCCeEEEEcC-------------CCcEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence 36689999999999999999999988765 124899999999999999999999986654 5799999
Q ss_pred EEEEeccCcccccccce
Q 036222 193 LIAEKRHHLFRRDGDDL 209 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL 209 (298)
+|+|..+..+..+...+
T Consensus 333 ~~~v~~P~~l~~~q~~~ 349 (380)
T PRK14276 333 TVNIVTPTKLNDAQKEA 349 (380)
T ss_pred EEEEECCCCCCHHHHHH
Confidence 99998776655444433
No 60
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=5.2e-08 Score=95.36 Aligned_cols=83 Identities=13% Similarity=0.150 Sum_probs=68.4
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|.+|+.|++++|... ...++|+||+|+++|++++|+|+|.+..+. .+|||||
T Consensus 282 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl-------------dg~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V 348 (397)
T PRK14281 282 VRNGDDVIYNLAVSYPDLVLGTKVEVPTL-------------DGAVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYV 348 (397)
T ss_pred EEecCCEEEEEEecHHHHhcCCeEEeecC-------------CccEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 35689999999999999999999888764 124899999999999999999999986543 5799999
Q ss_pred EEEEeccCcccccccce
Q 036222 193 LIAEKRHHLFRRDGDDL 209 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL 209 (298)
+|+|.-+..+..+...+
T Consensus 349 ~~~V~~P~~Ls~~qk~~ 365 (397)
T PRK14281 349 RVNVFVPKEVSHQDKEL 365 (397)
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 99998776555444433
No 61
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=1.6e-07 Score=85.77 Aligned_cols=145 Identities=49% Similarity=0.817 Sum_probs=124.3
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcE-EeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEE
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQL-IQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFL 193 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~-~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~ 193 (298)
++...+...+.+++++.+.|+.+...+.+...-..+.. ......+.+.+.+++..|..+.....|+..++..+.++++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~f~ 236 (306)
T KOG0714|consen 157 RQSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADIEFV 236 (306)
T ss_pred cCCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCcceeEEE
Confidence 34445777777799999999999988876654333322 55677889999999999999999999987776678899999
Q ss_pred EEEeccCcccccccceeEE--EEEChhhhcCCCeEEEeCCCCcEEEEEcC-CccccCCcEEEEcCCCCCC
Q 036222 194 IAEKRHHLFRRDGDDLELA--VEIPLVKALTGCTISVPLLGGEKMDLSID-DEIIHPGYVKMIEGQGMPT 260 (298)
Q Consensus 194 I~vk~h~~F~R~G~DL~~~--~~Isl~eAl~G~~i~I~tldG~~i~v~ip-~~~i~~G~~~rl~G~GmP~ 260 (298)
+..++|..|.+.+.+|... ..|++.+|++|+...+++++|..+.+.+. . .+.++...+++++|+|.
T Consensus 237 ~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 237 VDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKD-LIEPGEEDVIPGEGLPC 305 (306)
T ss_pred EecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCccccc-ccCCCceeeecCCCCCC
Confidence 9999999999999999999 99999999999999999999987777777 5 88999999999999986
No 62
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.66 E-value=6.7e-08 Score=94.02 Aligned_cols=85 Identities=14% Similarity=0.184 Sum_probs=69.6
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++.+.|+|.+|+.|+++.|... ....++|.||+|+++|++++++|+|.+..+. .+|||||
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------------d~~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V 326 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------------LDGPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA 326 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEecC------------CCCeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999887753 1347899999999999999999999986544 6899999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|+|.-+..+..+...++
T Consensus 327 ~~~V~~P~~Ls~~qk~~l 344 (378)
T PRK14278 327 HVEVVVPTRLDHEDIELL 344 (378)
T ss_pred EEEEEcCCCCCHHHHHHH
Confidence 999987765555444433
No 63
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.66 E-value=6.3e-08 Score=94.14 Aligned_cols=82 Identities=13% Similarity=0.204 Sum_probs=67.8
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++++.|+|.||+.|+++.|... .| .++|+||+|+.+|++++++|+|.+..+. .+|||||
T Consensus 263 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v 329 (376)
T PRK14280 263 ERDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYV 329 (376)
T ss_pred EEecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999888754 12 4799999999999999999999986543 6799999
Q ss_pred EEEEeccCcccccccc
Q 036222 193 LIAEKRHHLFRRDGDD 208 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~D 208 (298)
+|+|..+..+..+...
T Consensus 330 ~~~v~~P~~Ls~~q~~ 345 (376)
T PRK14280 330 VVRVVTPTKLTDRQKE 345 (376)
T ss_pred EEEEECCCCCCHHHHH
Confidence 9999977655544433
No 64
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.65 E-value=6.4e-08 Score=94.21 Aligned_cols=82 Identities=13% Similarity=0.171 Sum_probs=67.8
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|+++.+.|+|.+|+.|++++|... .| .++|+||+|+++|++++++|+|.+..+. .+|||||
T Consensus 268 ~R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v 334 (380)
T PRK14297 268 KRKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYV 334 (380)
T ss_pred EEeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEE
Confidence 35689999999999999999999888764 12 4899999999999999999999976544 6799999
Q ss_pred EEEEeccCcccccccc
Q 036222 193 LIAEKRHHLFRRDGDD 208 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~D 208 (298)
+|.|.-+..+..+...
T Consensus 335 ~~~v~~P~~ls~~q~~ 350 (380)
T PRK14297 335 TVIVDIPKKLNSKQKE 350 (380)
T ss_pred EEEEEcCCCCCHHHHH
Confidence 9999877655544433
No 65
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.61 E-value=6.7e-08 Score=93.73 Aligned_cols=84 Identities=14% Similarity=0.161 Sum_probs=70.9
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|++..+.|+|.||+.|++++|... .| ..+|.||+|+++|++++|+|+|.+.+++ .+|||||
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL------DG-------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV 324 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC------CC-------CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46689999999999999999999888754 23 2479999999999999999999986644 5899999
Q ss_pred EEEEeccCccccccccee
Q 036222 193 LIAEKRHHLFRRDGDDLE 210 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL~ 210 (298)
+|.+..++.+..+...|+
T Consensus 325 ~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14292 325 EYEIAVPKQLSPEAREAL 342 (371)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999988777665554
No 66
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.57 E-value=1.5e-07 Score=91.91 Aligned_cols=83 Identities=18% Similarity=0.213 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.|+|.|++++++|+|.||+.|+++.|... .| .++|.||+|+++|++++++|+|.+..+. .+|||||
T Consensus 275 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v 341 (386)
T PRK14277 275 KREGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIV 341 (386)
T ss_pred EEecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35688999999999999999999887754 22 3799999999999999999999976543 5799999
Q ss_pred EEEEeccCcccccccce
Q 036222 193 LIAEKRHHLFRRDGDDL 209 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL 209 (298)
+|.|.-+.....+...+
T Consensus 342 ~~~V~~P~~Ls~~qk~~ 358 (386)
T PRK14277 342 KVYIEVPKKLTEKQKEL 358 (386)
T ss_pred EEEEEeCCCCCHHHHHH
Confidence 99998766555444433
No 67
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.55 E-value=1.9e-07 Score=90.78 Aligned_cols=83 Identities=12% Similarity=0.172 Sum_probs=67.4
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCC-CCccEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGT-QPADIIF 192 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~-~~GDL~v 192 (298)
.++|.|+++++.|+|.+|+.|+++.|... .| +++|.||+|+++|++++++|+|.+..+. .+|||||
T Consensus 266 ~r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v 332 (378)
T PRK14283 266 RREGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYV 332 (378)
T ss_pred EEecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 35588999999999999999999887754 12 6899999999999999999999976543 6799999
Q ss_pred EEEEeccCcccccccce
Q 036222 193 LIAEKRHHLFRRDGDDL 209 (298)
Q Consensus 193 ~I~vk~h~~F~R~G~DL 209 (298)
+|++.-++....+...+
T Consensus 333 ~~~v~~P~~l~~~q~~l 349 (378)
T PRK14283 333 KVKVVVPKKLSPKQKEL 349 (378)
T ss_pred EEEEEeCCCCCHHHHHH
Confidence 99998665544444333
No 68
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.48 E-value=2.9e-07 Score=90.75 Aligned_cols=85 Identities=14% Similarity=0.126 Sum_probs=69.1
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCC--CccCcEEEEccCccCCCCC--CCcc
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPG--WKKGTKITFEGKGNEVPGT--QPAD 189 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G--~~dG~~Irl~g~G~~~~~~--~~GD 189 (298)
.|+|.|+++++.|+|.+|+.|+++.|... .| +.++|+||+| +++|++++|+|+|.+..+. .+||
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG------~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD 337 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL------DG------RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN 337 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CC------CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence 36689999999999999999998887755 23 4689999999 9999999999999985443 5799
Q ss_pred EEEEEEEecc--Cccccccccee
Q 036222 190 IIFLIAEKRH--HLFRRDGDDLE 210 (298)
Q Consensus 190 L~v~I~vk~h--~~F~R~G~DL~ 210 (298)
|||++.|.-+ ..+..+...++
T Consensus 338 L~V~~~V~~P~~~~Ls~~qk~ll 360 (421)
T PTZ00037 338 LYVTFEVIFPVDRKFTNEEKEIL 360 (421)
T ss_pred EEEEEEEEcCCCCCCCHHHHHHH
Confidence 9999999877 55555444333
No 69
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.36 E-value=5.9e-07 Score=84.44 Aligned_cols=139 Identities=14% Similarity=0.219 Sum_probs=106.2
Q ss_pred CCchhhhhcccceeEeecCCCCCccccCcCcCCCCCCCccccCCCCCC----CCCCCEEEEEEEehHhHhcCcEEEEEEe
Q 036222 67 TPSSLYRSISRKSAELTGHPGASPASLSRNTSRRSTTPIMYSNSTGIP----VKPPAVEKKLECTLEELCFGCTKKIKIT 142 (298)
Q Consensus 67 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~fs~~~g~~----~kg~di~~~l~vsLeea~~G~~k~I~i~ 142 (298)
...+++++.-|...++.+.....|..|-+.+.-.+.....|..|.+.+ ..-.+.... .|..|...-.+.
T Consensus 144 ~~~~f~~A~~g~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~-------~~~~c~~~~~~~ 216 (288)
T KOG0715|consen 144 LSLDFKEAVRGSKKRISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILY-------TCSYCLGRGLVL 216 (288)
T ss_pred cccCHHHHhhccccceEEEeecccccccCcCcccccccccchhhhCcccccccccCCccee-------ecccccccceec
Confidence 467788888888788888888899999888877777777777776653 111222222 344454444455
Q ss_pred eee--ecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 143 RDA--ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 143 r~~--~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
+.. .|..-+.+...+.+.+.+|+|+.++.+|++.+.|.. ||++.+.|.+++.|+|+|.|+++...|++.+
T Consensus 217 ~~~c~~~~g~~~v~~~k~i~i~~~~g~~~~~~l~~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 217 RDNCQACSGAGQVRRAKDIMIVLPAGVRSADTLRFAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred cchHHHhhcchhhhhheeEEeecCcccccccEEEEecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence 554 344434788899999999999999999999998753 9999999999999999999999999998754
No 70
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.34 E-value=1.2e-06 Score=90.42 Aligned_cols=72 Identities=10% Similarity=0.087 Sum_probs=62.3
Q ss_pred CCCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEE
Q 036222 114 PVKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFL 193 (298)
Q Consensus 114 ~~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~ 193 (298)
.|+|.|+++.+.|+|.+|+.|+++.|... .| .++|.||+|+++|++++++|+|.+..++.+|||||.
T Consensus 742 rRdGdDL~~~v~ISL~EALLGgtIeIpTL------DG-------rVkLkIPpgTqpGqvLRIkGKGMP~~~~~RGDLyV~ 808 (871)
T TIGR03835 742 QIKNDGLHVAALVDPLVAYNGGIIDVFGP------NK-------LFNVRIPGGIKVNDQVIFKDLGLTKTKYDKGSLIVH 808 (871)
T ss_pred EEECCeEEEEEecCHHHHhcCCEEEeeCC------CC-------CEEEeeCCCCCCCcEEEECCCCCCCCCCCCCCEEEE
Confidence 46799999999999999999998888765 22 489999999999999999999997544468999999
Q ss_pred EEEec
Q 036222 194 IAEKR 198 (298)
Q Consensus 194 I~vk~ 198 (298)
|.+..
T Consensus 809 f~V~~ 813 (871)
T TIGR03835 809 LYYSS 813 (871)
T ss_pred EEEee
Confidence 99854
No 71
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=0.00015 Score=69.25 Aligned_cols=74 Identities=22% Similarity=0.293 Sum_probs=60.2
Q ss_pred CCCCCEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCC--CccCcEEEEccCccCCCCCCCccEEE
Q 036222 115 VKPPAVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPG--WKKGTKITFEGKGNEVPGTQPADIIF 192 (298)
Q Consensus 115 ~kg~di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G--~~dG~~Irl~g~G~~~~~~~~GDL~v 192 (298)
+++.|+.+.++++|.|+..|..+.+... ..+.+++.++|| +.+|++.++.|+|++..+...|||||
T Consensus 249 Rrg~dL~~~~~i~l~eal~G~~~~~~~l------------dGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi 316 (337)
T KOG0712|consen 249 RRGSDLYRKLTISLVEALCGFQRVWETL------------DGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYI 316 (337)
T ss_pred ecccccceeeecchhhccccceEEEEcc------------CCceEEEecCCCceeChhHEEeecCCCcccccCCCCcEEE
Confidence 3467777777888888888877766622 356899999999 89999999999999877667999999
Q ss_pred EEEEeccC
Q 036222 193 LIAEKRHH 200 (298)
Q Consensus 193 ~I~vk~h~ 200 (298)
.++|+-++
T Consensus 317 ~~~v~fp~ 324 (337)
T KOG0712|consen 317 KFEVKFPK 324 (337)
T ss_pred EEEEEcCC
Confidence 99998776
No 72
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=88.03 E-value=1.5 Score=37.59 Aligned_cols=78 Identities=22% Similarity=0.256 Sum_probs=66.4
Q ss_pred CEEEEEEEehHhHhcCcEEEEEEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEec
Q 036222 119 AVEKKLECTLEELCFGCTKKIKITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKR 198 (298)
Q Consensus 119 di~~~l~vsLeea~~G~~k~I~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~ 198 (298)
+....+.+++.+++.+....+.... .....+.++.|+..+..+++.+.+.... ...++.+..+..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 216 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLL------------GKALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKELSKR 216 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccc------------cccccccCCcccccCceeeecccCCcCC-CCcccceeeeeccC
Confidence 6788899999999999888776641 2334489999999999999999987766 66799999999999
Q ss_pred cCcccccccce
Q 036222 199 HHLFRRDGDDL 209 (298)
Q Consensus 199 h~~F~R~G~DL 209 (298)
++.|..+++++
T Consensus 217 ~~~~~~~~~~~ 227 (237)
T COG2214 217 HPPFALEGDDK 227 (237)
T ss_pred CCCccccCCcc
Confidence 99999999998
No 73
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=68.49 E-value=12 Score=35.44 Aligned_cols=179 Identities=13% Similarity=0.040 Sum_probs=93.8
Q ss_pred hcccceeEeecCCCCCccccC-------cCc---CCCCCCCccccCCCCC----CCCCCCEEEEEEEehHhHhcCcEEEE
Q 036222 74 SISRKSAELTGHPGASPASLS-------RNT---SRRSTTPIMYSNSTGI----PVKPPAVEKKLECTLEELCFGCTKKI 139 (298)
Q Consensus 74 ~~~~~~~~l~~~~~~~~~~~~-------~~~---~~~~~~~~~fs~~~g~----~~kg~di~~~l~vsLeea~~G~~k~I 139 (298)
.++.+|.||..+++++.+.-. +.. ..+|.-.+.|....+. ...+.+.+..+.++|++|..|+.+.+
T Consensus 80 ~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~~g~~~~~ 159 (288)
T KOG0715|consen 80 EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGEFGGNPFDVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAVRGSKKRI 159 (288)
T ss_pred chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhccccccCCccchHHHhhcccccccccCcccccccccCHHHHhhccccce
Confidence 445566677777777775331 111 2222212444433222 22356888889999999999998888
Q ss_pred EEeeeeecCCCcEEeeceEEEEEeCCCCccCcEEEEccCccCCCCCCCccEEEEEEEeccCcccccccceeEEEEEChhh
Q 036222 140 KITRDAITSSGQLIQDEEVLSIKVKPGWKKGTKITFEGKGNEVPGTQPADIIFLIAEKRHHLFRRDGDDLELAVEIPLVK 219 (298)
Q Consensus 140 ~i~r~~~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g~G~~~~~~~~GDL~v~I~vk~h~~F~R~G~DL~~~~~Isl~e 219 (298)
.+.....|.+-. ....++|+....--+-.|.|... .....++++. .. ..-+....+..+-..
T Consensus 160 ~~~~~~~~~t~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~--~~-------~~c~~~~~~~~~~c~ 221 (288)
T KOG0715|consen 160 SFNVLSDCETCF--------GSGAEEGAKRESCKTCSGRGLVS-NPKEDPFILY--TC-------SYCLGRGLVLRDNCQ 221 (288)
T ss_pred EEEeeccccccc--------CcCcccccccccchhhhCccccc-ccccCCccee--ec-------ccccccceeccchHH
Confidence 888766664310 00033333322222222222100 0012333333 00 001111122222233
Q ss_pred hcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCCC
Q 036222 220 ALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTELT 283 (298)
Q Consensus 220 Al~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls 283 (298)
+-.|-. .|.. -+.+.|.+|+ ++..+.++++++.|-- ||+|.+.|.--..+.
T Consensus 222 ~~~g~~-~v~~--~k~i~i~~~~-g~~~~~~l~~~~~~~~---------~l~v~~~v~~~~~~~ 272 (288)
T KOG0715|consen 222 ACSGAG-QVRR--AKDIMIVLPA-GVRSADTLRFAGHGND---------DLFVRLIVAKSPSFR 272 (288)
T ss_pred Hhhcch-hhhh--heeEEeecCc-ccccccEEEEecCCcc---------eEEEEEEeccCcccc
Confidence 444433 2222 2347788999 8999999999987532 899999998655555
No 74
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=50.14 E-value=19 Score=25.54 Aligned_cols=25 Identities=20% Similarity=0.547 Sum_probs=20.0
Q ss_pred CCCcEEEEEEEECCCC--CCHHHHHHH
Q 036222 266 ARGNLKLLFLVDFPTE--LTDEQRSNV 290 (298)
Q Consensus 266 ~rGDLiI~f~V~~P~~--Ls~~qr~~l 290 (298)
+.||+.|-|+|.+|+- +|+++-+.+
T Consensus 26 k~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 26 KNGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred cCCCEEEEEEecCCeeEEechhHhHHh
Confidence 4599999999999995 666666554
No 75
>PRK14051 negative regulator GrlR; Provisional
Probab=42.17 E-value=1.4e+02 Score=24.37 Aligned_cols=71 Identities=20% Similarity=0.273 Sum_probs=43.3
Q ss_pred CccEEEEEEEeccCcccccccceeEEEEEC--hhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCC
Q 036222 187 PADIIFLIAEKRHHLFRRDGDDLELAVEIP--LVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPT 260 (298)
Q Consensus 187 ~GDL~v~I~vk~h~~F~R~G~DL~~~~~Is--l~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~ 260 (298)
..||++.++-..|+.-.--+-+--+.+.|+ +.+.=.|+++.=.--+++++.|.+.+.-+ ..+.|++-|||.
T Consensus 47 d~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~akFI---~~LvI~~~~~~~ 119 (123)
T PRK14051 47 DEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFI---EPLVIKNTGMPQ 119 (123)
T ss_pred cceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEeeeee---eeeEEccCCCcc
Confidence 356777776665555444444444666777 44444455554444566767777665222 468999999995
No 76
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=40.99 E-value=37 Score=24.48 Aligned_cols=23 Identities=22% Similarity=0.225 Sum_probs=19.9
Q ss_pred EEEEECCCCCCHHHHHHHHhhhh
Q 036222 273 LFLVDFPTELTDEQRSNVLGILE 295 (298)
Q Consensus 273 ~f~V~~P~~Ls~~qr~~l~~il~ 295 (298)
..+..||.+||++||..+..+..
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~ 39 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLAS 39 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHH
Confidence 67889999999999999887754
No 77
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=35.70 E-value=47 Score=23.83 Aligned_cols=24 Identities=21% Similarity=0.349 Sum_probs=20.2
Q ss_pred EEEEECCCCCCHHHHHHHHhhhhh
Q 036222 273 LFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 273 ~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
.-...||..||+.+|..+.++..+
T Consensus 16 ~~~l~Fpp~ls~~eR~~vH~~a~~ 39 (59)
T cd06007 16 NEEYEFPSSLTNHERAVIHRLCRK 39 (59)
T ss_pred ccEEEcCCCCCHHHHHHHHHHHHH
Confidence 456789999999999999888653
No 78
>KOG2724 consensus Nuclear pore complex component NPAP60L/NUP50 [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.73 E-value=70 Score=31.98 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=58.1
Q ss_pred cEEEEEEEeccCcccccccceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEE--EEcCCCCCCCCCCCC
Q 036222 189 DIIFLIAEKRHHLFRRDGDDLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVK--MIEGQGMPTKDPEGA 266 (298)
Q Consensus 189 DL~v~I~vk~h~~F~R~G~DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~--rl~G~GmP~~~~~~~ 266 (298)
-+|+..++.+++.|.-.+-.+++.-.=.+.+-=.|.-.-=++-++ .++|-|+. -++-|.++ .|-.+|||.... +.
T Consensus 370 pkve~~ev~edda~ysKkckvfykKdKEf~dkGvgtl~lkp~~~~-k~qlLvra-dtnlGnilLN~Ll~kgMkctr~-gk 446 (487)
T KOG2724|consen 370 PKVETVEVQEDDAVYSKKCKVFYKKDKEFTDKGVGTLHLKPNDRG-KFQLLVRA-DTNLGNILLNSLLNKGMKCTRV-GK 446 (487)
T ss_pred CeeEeecccCccchhccccceEEEecccccccccceeeccccccc-ceeeeehh-ccchhHHHHHHhhcCCCcceec-cC
Confidence 367888888888777777766666655665654444333333345 48888888 78888877 688999998754 56
Q ss_pred CCcEEEEEE
Q 036222 267 RGNLKLLFL 275 (298)
Q Consensus 267 rGDLiI~f~ 275 (298)
.++||+.+-
T Consensus 447 nnvlIvcvp 455 (487)
T KOG2724|consen 447 NNVLIVCVP 455 (487)
T ss_pred CceEEEEeC
Confidence 788887653
No 79
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=33.67 E-value=51 Score=23.68 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=20.4
Q ss_pred EEEEECCCCCCHHHHHHHHhhhhh
Q 036222 273 LFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 273 ~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
.-.+.||..||+.+|.++.++..+
T Consensus 17 ~~~l~f~p~lt~~eR~~vH~~a~~ 40 (60)
T cd02640 17 IRDMVFSPEFSKEERALIHQIAQK 40 (60)
T ss_pred cceEEcCCCCCHHHHHHHHHHHHH
Confidence 356889999999999999988754
No 80
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=32.98 E-value=1.1e+02 Score=25.65 Aligned_cols=71 Identities=23% Similarity=0.228 Sum_probs=58.1
Q ss_pred ceeEEEEEChhhhcCCCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCCCCCCCcEEEEEEEECCCCC
Q 036222 208 DLELAVEIPLVKALTGCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDPEGARGNLKLLFLVDFPTEL 282 (298)
Q Consensus 208 DL~~~~~Isl~eAl~G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~~~~rGDLiI~f~V~~P~~L 282 (298)
++...+.++..+++.+....+.-..+......++. +...+..+++.+++.... +..|+++.++.+......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKA-GALEGKALRLKGLLKSAR---GALGKARLKELSKRHPPF 220 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCc-ccccCceeeecccCCcCC---CCcccceeeeeccCCCCc
Confidence 67788899999999998888887777655567888 889999999999998765 467999999988866543
No 81
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=31.18 E-value=54 Score=29.10 Aligned_cols=31 Identities=13% Similarity=0.086 Sum_probs=24.4
Q ss_pred ecCCCcEEeeceEEEEEeCCCCccCcEEEEcc
Q 036222 146 ITSSGQLIQDEEVLSIKVKPGWKKGTKITFEG 177 (298)
Q Consensus 146 ~c~~G~~~~~~~~l~V~IP~G~~dG~~Irl~g 177 (298)
.|++.+.+...+...+++ .|+.+|++|++.-
T Consensus 120 ~C~G~G~v~~~~~~~~k~-~g~~~g~~it~~~ 150 (186)
T TIGR02642 120 TCAGTGRFRPTVEDLLKS-FGVDSGAAIVLKD 150 (186)
T ss_pred CCCCccEEeeeEEEEEEe-eeccCCceeeHHH
Confidence 355556777888889999 9999999998753
No 82
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=30.15 E-value=1.2e+02 Score=20.77 Aligned_cols=36 Identities=11% Similarity=-0.004 Sum_probs=28.7
Q ss_pred CCeEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCC
Q 036222 223 GCTISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMP 259 (298)
Q Consensus 223 G~~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP 259 (298)
+-...|-|.||+-+.|+.++ ..+-|+++.+.-+-..
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~-~~~vG~eI~~~~~~~~ 40 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKP-GMEVGQEIEFDEKDII 40 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCC-CCcccCEEEEechhhc
Confidence 45667899999999999888 5888999988765443
No 83
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=29.19 E-value=64 Score=23.05 Aligned_cols=23 Identities=26% Similarity=0.430 Sum_probs=19.7
Q ss_pred EEEECCCCCCHHHHHHHHhhhhh
Q 036222 274 FLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 274 f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
-.+.||..||..||..+.++.+.
T Consensus 18 ~~l~F~p~ls~~eR~~vH~lA~~ 40 (60)
T cd02641 18 TELEFPPTLSSHDRLLVHELAEE 40 (60)
T ss_pred CcEECCCCCCHHHHHHHHHHHHH
Confidence 46789999999999999988753
No 84
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=27.90 E-value=48 Score=31.15 Aligned_cols=32 Identities=25% Similarity=0.349 Sum_probs=26.0
Q ss_pred EEEEEChhhhcCC-CeEEEeCCCCcEEEEEcCC
Q 036222 211 LAVEIPLVKALTG-CTISVPLLGGEKMDLSIDD 242 (298)
Q Consensus 211 ~~~~Isl~eAl~G-~~i~I~tldG~~i~v~ip~ 242 (298)
+...|-|+||+.| |..+|++.|++.=.|.|.+
T Consensus 18 YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTp 50 (311)
T KOG0315|consen 18 YDHTIRFWQALTGICSRTIQHPDSQVNRLEITP 50 (311)
T ss_pred CcceeeeeehhcCeEEEEEecCccceeeEEEcC
Confidence 3567889999999 8999999999866677644
No 85
>PF08774 VRR_NUC: VRR-NUC domain; InterPro: IPR014883 This entry contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI: (P40815 from SWISSPROT).; GO: 0016788 hydrolase activity, acting on ester bonds
Probab=25.35 E-value=1.1e+02 Score=23.42 Aligned_cols=27 Identities=22% Similarity=0.235 Sum_probs=22.8
Q ss_pred EEEEEEEECCC-CCCHHHHHHHHhhhhh
Q 036222 270 LKLLFLVDFPT-ELTDEQRSNVLGILED 296 (298)
Q Consensus 270 LiI~f~V~~P~-~Ls~~qr~~l~~il~~ 296 (298)
.+.-++|+.|. +|+++|+.-+..+...
T Consensus 62 ~~~~iEvK~p~~~ls~~Q~~~~~~l~~~ 89 (100)
T PF08774_consen 62 IFLFIEVKGPGDRLSPNQKEWIDKLREA 89 (100)
T ss_pred EEEEEEEcCCCCCcCHHHHHHHHHHHHC
Confidence 68889999995 7999999999877653
No 86
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=24.62 E-value=1.2e+02 Score=25.86 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=28.7
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 266 ARGNLKLLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 266 ~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
.+|+-.+.|...-|..|++.|+.++.++++.
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I~S 138 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVIQS 138 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHHHh
Confidence 6899999999999999999999999998853
No 87
>TIGR00013 taut 4-oxalocrotonate tautomerase family enzyme. 4-oxalocrotonate tautomerase is a homohexamer in which each monomer is very small, at about 62 amino acids. Pro-1 of the mature protein serves as a general base. The enzyme functions in meta-cleavage pathways of aromatic hydrocarbon catabolism. Because several Arg residues located near the active site in the crystal structure of Pseudomonas putida are not conserved among all members of this family, because the literature describes a general role in the isomerization of beta,gamma-unsaturated enones to their alpha,beta-isomers, and because of the presence of fairly distantly related paralogs in Campylobacter jejuni, the family is regarded as not necessarily uniform in function.
Probab=24.36 E-value=1.1e+02 Score=21.19 Aligned_cols=24 Identities=17% Similarity=0.218 Sum_probs=16.5
Q ss_pred EEEEEECCCCCCHHHHHHHHhhhhh
Q 036222 272 LLFLVDFPTELTDEQRSNVLGILED 296 (298)
Q Consensus 272 I~f~V~~P~~Ls~~qr~~l~~il~~ 296 (298)
|++++. ++..|.+||+.|-+.+.+
T Consensus 3 i~i~i~-~~grt~eqK~~l~~~it~ 26 (63)
T TIGR00013 3 VNIYIL-KEGRTDEQKRQLIEGVTE 26 (63)
T ss_pred EEEEEC-CCCCCHHHHHHHHHHHHH
Confidence 444444 367899999888776643
No 88
>TIGR03561 organ_hyd_perox peroxiredoxin, Ohr subfamily. Pfam model pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein.
Probab=24.23 E-value=1.3e+02 Score=24.56 Aligned_cols=28 Identities=18% Similarity=0.411 Sum_probs=23.3
Q ss_pred EEEEEEEECCCCCCHHHHHHHHhhhhhcC
Q 036222 270 LKLLFLVDFPTELTDEQRSNVLGILEDCC 298 (298)
Q Consensus 270 LiI~f~V~~P~~Ls~~qr~~l~~il~~~~ 298 (298)
+-|++.|.+|. +++++.+.|.+..++.|
T Consensus 91 ~~v~l~i~~~~-~~~e~~~~l~~~a~~~C 118 (134)
T TIGR03561 91 LSVELKVTLPG-LDQAEAEALVEAAHQVC 118 (134)
T ss_pred EEEEEEEECCC-CCHHHHHHHHHHHhccC
Confidence 45777788884 99999999999998877
No 89
>TIGR03549 conserved hypothetical protein TIGR03549. This family consists of remarkably well-conserved proteins from gamma and beta Proteobacteria, heavily skewed towards organisms of marine environments. This family has an OsmC-like N-terminal domain. It shares a central domain, modeled by pfam02624 and TIGR00702, with other families of smaller proteins. The function is unknown. Fifteen of the first sixteen members of this family are from selenouridine-positive genomes, but this correlation may be fortuitous.
Probab=21.58 E-value=1.1e+02 Score=32.76 Aligned_cols=27 Identities=19% Similarity=0.629 Sum_probs=24.0
Q ss_pred EEEEEEECCCCCCHHHHHHHHhhhhhc
Q 036222 271 KLLFLVDFPTELTDEQRSNVLGILEDC 297 (298)
Q Consensus 271 iI~f~V~~P~~Ls~~qr~~l~~il~~~ 297 (298)
+++++|.+|..|+++|++.|.++...|
T Consensus 85 ~~~~~I~lpgdL~eeqr~rLl~iA~rC 111 (718)
T TIGR03549 85 IFKIQVELPEDISEKDRQGILRSIDRC 111 (718)
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHhcC
Confidence 689999999999999999999998543
No 90
>PF02963 EcoRI: Restriction endonuclease EcoRI; InterPro: IPR004221 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents restriction endonucleases EcoRI, which requires magnesium as a cofactor. EcoRI recognises the DNA sequence GAATTC and cleaves after G-1 [].; GO: 0000287 magnesium ion binding, 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system; PDB: 1ERI_A 1CL8_A 1QRH_A 1QPS_A 1CKQ_A 1QC9_B 1QRI_A 2OXV_A.
Probab=20.86 E-value=34 Score=31.10 Aligned_cols=39 Identities=23% Similarity=0.254 Sum_probs=24.1
Q ss_pred eEEEeCCCCcEEEEEcCCccccCCcEEEEcCCCCCCCCC
Q 036222 225 TISVPLLGGEKMDLSIDDEIIHPGYVKMIEGQGMPTKDP 263 (298)
Q Consensus 225 ~i~I~tldG~~i~v~ip~~~i~~G~~~rl~G~GmP~~~~ 263 (298)
+++|.-+||+.++|..+......=+.+.-.+.|||...|
T Consensus 162 ~~~v~rpdgrvv~l~ynsg~lnrldrltaanygmpintn 200 (257)
T PF02963_consen 162 TISVTRPDGRVVTLEYNSGMLNRLDRLTAANYGMPINTN 200 (257)
T ss_dssp -EEEEETTSEEEEE-TT-TTT--GGGTGGGGTT--SSS-
T ss_pred ceeeeCCCCcEEEEEeccchhhHHHHHhhhhcCCccchh
Confidence 678999999998888776233333566778999998754
No 91
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=20.69 E-value=1.9e+02 Score=23.60 Aligned_cols=26 Identities=12% Similarity=-0.055 Sum_probs=18.4
Q ss_pred cccceeEeecCCCCCccccCcCcCCC
Q 036222 75 ISRKSAELTGHPGASPASLSRNTSRR 100 (298)
Q Consensus 75 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 100 (298)
+++....+......-|..|+..++|+
T Consensus 4 v~~~~~~V~~~r~saC~~C~~~~~Cg 29 (135)
T PF04246_consen 4 VEGGIAWVEVQRSSACGSCSASGGCG 29 (135)
T ss_pred EeCCEEEEEEccCCcCcccCCCCCCC
Confidence 45666677777777788888666666
No 92
>PHA02902 putative IMV membrane protein; Provisional
Probab=20.54 E-value=84 Score=23.17 Aligned_cols=43 Identities=19% Similarity=0.071 Sum_probs=25.7
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHhhhhhc
Q 036222 255 GQGMPTKDPEGARGNLKLLFLVDFPTELTDEQRSNVLGILEDC 297 (298)
Q Consensus 255 G~GmP~~~~~~~rGDLiI~f~V~~P~~Ls~~qr~~l~~il~~~ 297 (298)
+++.|.+.+..++=+=++.=.-.|-++||++|...|..+...|
T Consensus 27 ~kci~sP~~~d~~~~~~l~~d~~F~D~lTpDQirAlHrlvT~S 69 (70)
T PHA02902 27 YKCIPSPDDRDERFGDTLEDDPLFKDSLTPDQIKALHRLVSLS 69 (70)
T ss_pred hcCCCCCCCccccccccCCCCchhhccCCHHHHHHHHHHHhcc
Confidence 4455544332222222233344577789999999998887654
Done!