BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036225
(622 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 468 bits (1205), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/330 (70%), Positives = 268/330 (81%), Gaps = 5/330 (1%)
Query: 263 RQRRNQQMFFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQ 322
R+++ Q FFDV EV LG L+RF RELQVA+ NFS+KNILG+GGFG VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 323 DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNG 382
DGT+VAVKRLK+ GGE+QFQTEVEMIS+AVHRNLLRL GFCMTPTERLLVYPYM+NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 383 SVAS----RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE 438
SVAS R + +P LDW R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLD+ E
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 439 AVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
AVVGDFGLAKL+D++D HV AVRGT+GHIAPEYLSTG+SSEKTDVFG+G++LLELITGQ
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240
Query: 499 RALEYGKAANQKGAM-LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYL 557
RA + + AN M LDWVK + +EKKLE LVD DL+ NY E+E+++QVALLCTQ
Sbjct: 241 RAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 300
Query: 558 PAHRPKMSEVVRMLEGDGLAERWEASQRAE 587
P RPKMSEVVRMLEGDGLAERWE Q+ E
Sbjct: 301 PMERPKMSEVVRMLEGDGLAERWEEWQKEE 330
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 458 bits (1178), Expect = e-129, Method: Compositional matrix adjust.
Identities = 227/322 (70%), Positives = 260/322 (80%), Gaps = 5/322 (1%)
Query: 271 FFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVK 330
FFDV EV LG L+RF RELQVA+ NF +KNILG+GGFG VYKG L DG +VAVK
Sbjct: 1 FFDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK 60
Query: 331 RLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVAS---- 386
RLK+ GGE+QFQTEVEMIS+AVHRNLLRL GFCMTPTERLLVYPYM+NGSVAS
Sbjct: 61 RLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRE 120
Query: 387 RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGL 446
R + +P LDW R+RIALG+ARGL YLH+ CDPKIIHRDVKAANILLD+ EAVVGDFGL
Sbjct: 121 RPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 180
Query: 447 AKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
AKL+D++D HV AVRG +GHIAPEYLSTG+SSEKTDVFG+G++LLELITGQRA + +
Sbjct: 181 AKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 507 ANQKGAM-LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMS 565
AN M LDWVK + +EKKLE LVD DL+ NY E+E+++QVALLCTQ P RPKMS
Sbjct: 241 ANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 566 EVVRMLEGDGLAERWEASQRAE 587
EVVRMLEGDGLAERWE Q+ E
Sbjct: 301 EVVRMLEGDGLAERWEEWQKEE 322
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/289 (37%), Positives = 163/289 (56%), Gaps = 10/289 (3%)
Query: 289 RFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEV 348
R +L+ AT+NF K ++G G FG VYKG+L+DG VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI----LDWSTRKRIAL 404
E +S H +L+ L GFC E +L+Y YM NG++ L G + + W R I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 405 GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRG 463
GAARGL YLH + IIHRDVK+ NILLD+ + DFG++K D +H+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKG 203
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
T+G+I PEY G+ +EK+DV+ FG++L E++ + A+ + + +W + H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNN 262
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+LE +VD +L + L + A+ C RP M +V+ LE
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 163/289 (56%), Gaps = 10/289 (3%)
Query: 289 RFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEV 348
R +L+ AT+NF K ++G G FG VYKG+L+DG VA+KR + + G +F+TE+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTPESSQGIEEFETEI 86
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI----LDWSTRKRIAL 404
E +S H +L+ L GFC E +L+Y YM NG++ L G + + W R I +
Sbjct: 87 ETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICI 146
Query: 405 GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKL-LDHQDSHVTTAVRG 463
GAARGL YLH + IIHRDVK+ NILLD+ + DFG++K + +H+ V+G
Sbjct: 147 GAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKG 203
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
T+G+I PEY G+ +EK+DV+ FG++L E++ + A+ + + +W + H
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPREMVNLAEWAVESHNN 262
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+LE +VD +L + L + A+ C RP M +V+ LE
Sbjct: 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 169/305 (55%), Gaps = 21/305 (6%)
Query: 281 EVSLGNLRRFQFRELQVATHNFSSK------NILGKGGFGIVYKGILQDGTVVAVKRLKD 334
EVS F F EL+ T+NF + N +G+GGFG+VYKG + + T VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 335 GNAIGGE---IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-- 389
I E QF E+++++ H NL+ L GF + LVY YM NGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 390 -GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
G P L W R +IA GAA G+ +LHE IHRD+K+ANILLD+ A + DFGLA+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 449 LLDH-QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAA 507
+ + + + + GT ++APE L G+ + K+D++ FG++LLE+ITG A++ +
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 508 NQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
+ + + +EK +E +DK + N+ D +E M VA C RP + +V
Sbjct: 241 --QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 568 VRMLE 572
++L+
Sbjct: 298 QQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 168/305 (55%), Gaps = 21/305 (6%)
Query: 281 EVSLGNLRRFQFRELQVATHNFSSK------NILGKGGFGIVYKGILQDGTVVAVKRLKD 334
EVS F F EL+ T+NF + N +G+GGFG+VYKG + + T VAVK+L
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAA 64
Query: 335 GNAIGGE---IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-- 389
I E QF E+++++ H NL+ L GF + LVY YM NGS+ RL
Sbjct: 65 MVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL 124
Query: 390 -GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
G P L W R +IA GAA G+ +LHE IHRD+K+ANILLD+ A + DFGLA+
Sbjct: 125 DGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 449 LLDH-QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAA 507
+ + + + GT ++APE L G+ + K+D++ FG++LLE+ITG A++ +
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP 240
Query: 508 NQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
+ + + +EK +E +DK + N+ D +E M VA C RP + +V
Sbjct: 241 --QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297
Query: 568 VRMLE 572
++L+
Sbjct: 298 QQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 166/304 (54%), Gaps = 21/304 (6%)
Query: 282 VSLGNLRRFQFRELQVATHNFSSK------NILGKGGFGIVYKGILQDGTVVAVKRLKDG 335
VS F F EL+ T+NF + N +G+GGFG+VYKG + + T VAVK+L
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAM 59
Query: 336 NAIGGE---IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--- 389
I E QF E+++++ H NL+ L GF + LVY YM NGS+ RL
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 390 GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKL 449
G P L W R +IA GAA G+ +LHE IHRD+K+ANILLD+ A + DFGLA+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 450 LDHQDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
+ V + GT ++APE L G+ + K+D++ FG++LLE+ITG A++ +
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP- 234
Query: 509 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + + +EK +E +DK + N+ D +E M VA C RP + +V
Sbjct: 235 -QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQ 292
Query: 569 RMLE 572
++L+
Sbjct: 293 QLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 159/296 (53%), Gaps = 21/296 (7%)
Query: 290 FQFRELQVATHNFSSK------NILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGE-- 341
F F EL+ T+NF + N G+GGFG+VYKG + + T VAVK+L I E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 342 -IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWS 397
QF E+++ + H NL+ L GF + LVY Y NGS+ RL G P L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
R +IA GAA G+ +LHE IHRD+K+ANILLD+ A + DFGLA+ + V
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 458 TTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDW 516
+ + GT + APE L G+ + K+D++ FG++LLE+ITG A++ + + +
Sbjct: 182 XXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREP--QLLLDIK 238
Query: 517 VKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ +EK +E +DK N+ D +E VA C RP + +V ++L+
Sbjct: 239 EEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 142/294 (48%), Gaps = 44/294 (14%)
Query: 297 VATHNFSSKNILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE------IQFQTEVE 349
+A + + +GKGGFG+V+KG +++D +VVA+K L G++ G +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRL--KGKPILDWSTRKRIALGAA 407
++S H N+++LYG P +V ++ G + RL K PI WS + R+ L A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLLDHQDSHVTTAVR 462
G+ Y+ Q +P I+HRD+++ NI L E A V DFGL++ Q H + +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLL 187
Query: 463 GTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALE---YGKAANQKGAMLDWV 517
G +APE + + S EK D + F ++L ++TG+ + YGK
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----------- 236
Query: 518 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 73
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 74 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 133 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 229
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 230 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 72
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 73 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 132 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 228
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 229 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 297 VATHNFSSKNILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE------IQFQTEVE 349
+A + + +GKGGFG+V+KG +++D +VVA+K L G++ G +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRL--KGKPILDWSTRKRIALGAA 407
++S H N+++LYG P +V ++ G + RL K PI WS + R+ L A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLLDHQDSHVTTAVR 462
G+ Y+ Q +P I+HRD+++ NI L E A V DFG ++ Q H + +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLL 187
Query: 463 GTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALE---YGKAANQKGAMLDWV 517
G +APE + + S EK D + F ++L ++TG+ + YGK
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----------- 236
Query: 518 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 64
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 65 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 220
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 70
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 71 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 226
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 227 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 66
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 67 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 126 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 222
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 223 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 297 VATHNFSSKNILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE------IQFQTEVE 349
+A + + +GKGGFG+V+KG +++D +VVA+K L G++ G +FQ EV
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRL--KGKPILDWSTRKRIALGAA 407
++S H N+++LYG P +V ++ G + RL K PI WS + R+ L A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPI-KWSVKLRLMLDIA 132
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLLDHQDSHVTTAVR 462
G+ Y+ Q +P I+HRD+++ NI L E A V DF L++ Q H + +
Sbjct: 133 LGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLL 187
Query: 463 GTVGHIAPEYLSTGQSS--EKTDVFGFGILLLELITGQRALE---YGKAANQKGAMLDWV 517
G +APE + + S EK D + F ++L ++TG+ + YGK
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI----------- 236
Query: 518 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
K + M+ ++ L+ + V LC P RP S +V+ L
Sbjct: 237 ------KFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 64
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 65 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 220
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 65
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 66 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 125 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 221
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 222 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 64
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 65 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 124 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 220
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 221 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 69
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 70 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 129 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 225
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 226 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 70
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 71 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 130 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 226
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 227 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 74
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 75 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 134 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 230
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 231 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 59
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 60 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHRD++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 119 FIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 215
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 216 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 130/285 (45%), Gaps = 32/285 (11%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
E +V LG G FG V+ G T VAVK LK G+ F E ++
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQ 60
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLL 411
H+ L+RLY +T ++ YM NGS+ LK + + K + + A A G+
Sbjct: 61 LQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
++ E+ IHR+++AANIL+ D + DFGLA+L++ + + + APE
Sbjct: 120 FIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ G + K+DV+ FGILL E++T R + Y N + V
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPE-------------------VI 216
Query: 532 KDLKNNYDRIE----LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++L+ Y + EE+ Q+ LC + P RP + +LE
Sbjct: 217 QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G G V+ G T VAVK LK G+ F E ++ H+ L+RLY +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYA-VV 77
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
T ++ YM NGS+ LK + + K + + A A G+ ++ E+ IHRD
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRD 134
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ D + DFGLA+L++ + + + APE ++ G + K+DV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 486 GFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE--- 542
FGILL E++T R + Y N + V ++L+ Y +
Sbjct: 195 SFGILLTEIVTHGR-IPYPGMTNPE-------------------VIQNLERGYRMVRPDN 234
Query: 543 -LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
EE+ Q+ LC + P RP + +LE
Sbjct: 235 CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 38/292 (13%)
Query: 285 GNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQF 344
G+L ++E++V + ++G+G FG+V K + VA+K+++ + F
Sbjct: 1 GSLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAF 49
Query: 345 QTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI-- 402
E+ +S H N+++LYG C+ P LV Y GS+ + L G L + T
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 403 -ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAV-VGDFGLAKLLDHQDSHVTTA 460
L ++G+ YLH +IHRD+K N+LL + + DFG A D Q +H+T
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ-THMTNN 164
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL-EYGKAANQKGAMLDWVKK 519
+G+ +APE SEK DVF +GI+L E+IT ++ E G A + + W
Sbjct: 165 -KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWA-- 217
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+H + ++ KN IE + C P+ RP M E+V+++
Sbjct: 218 VHNGTRPPLI-----KNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 7/210 (3%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMIS 352
++ + + + K +G G FG V++ G+ VAVK L + + + +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARG 409
H N++ G P +V Y+S GS+ L + LD R +A A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+ YLH + +P I+HRD+K+ N+L+D V DFGL++L + GT +A
Sbjct: 150 MNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWMA 207
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQR 499
PE L S+EK+DV+ FG++L EL T Q+
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQ 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 121/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +K+G+ E F E E++ H L++LYG C+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM--SEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV+ +M +G ++ L+ + + T + L G+ YL E C +IHRD+
Sbjct: 93 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 149
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 150 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 210 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 249
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 250 STHVYQIMNHCWKERPEDRPAFSRLLRQL 278
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 109/210 (51%), Gaps = 7/210 (3%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMIS 352
++ + + + K +G G FG V++ G+ VAVK L + + + +F EV ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARG 409
H N++ G P +V Y+S GS+ L + LD R +A A+G
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG 149
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+ YLH + +P I+HR++K+ N+L+D V DFGL++L +A GT +A
Sbjct: 150 MNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMA 207
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQR 499
PE L S+EK+DV+ FG++L EL T Q+
Sbjct: 208 PEVLRDEPSNEKSDVYSFGVILWELATLQQ 237
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 141/280 (50%), Gaps = 31/280 (11%)
Query: 303 SSKNILGKGGFGIVYKGILQDGT-----VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 357
+ + ++G G FG VYKG+L+ + VA+K LK G + F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHE 415
N++RL G +++ YM NG++ L+ K ++S + + + G A G+ YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYL-- 163
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYL 473
+ +HRD+ A NIL++ V DFGL+++L D + ++ T+ + + APE +
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 474 STGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDK 532
S + + +DV+ FGI++ E++T G+R Y + +N + +K I+ +L +D
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERP--YWELSNH-----EVMKAINDGFRLPTPMDC 275
Query: 533 DLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ + C Q A RPK +++V +L+
Sbjct: 276 P----------SAIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 38/291 (13%)
Query: 286 NLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQ 345
+L ++E++V + ++G+G FG+V K + VA+K+++ + F
Sbjct: 1 SLHMIDYKEIEV-------EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESE---RKAFI 49
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI--- 402
E+ +S H N+++LYG C+ P LV Y GS+ + L G L + T
Sbjct: 50 VELRQLSRVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAV-VGDFGLAKLLDHQDSHVTTAV 461
L ++G+ YLH +IHRD+K N+LL + + DFG A D Q +H+T
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA--CDIQ-THMTNN- 163
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL-EYGKAANQKGAMLDWVKKI 520
+G+ +APE SEK DVF +GI+L E+IT ++ E G A + + W +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR----IMWA--V 217
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
H + ++ KN IE + C P+ RP M E+V+++
Sbjct: 218 HNGTRPPLI-----KNLPKPIE-----SLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +++G E F E E++ H L++LYG C+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV+ +M +G ++ L+ + + T + L G+ YL E C +IHRD+
Sbjct: 76 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 132
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 133 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 193 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 232
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 233 STHVYQIMNHCWRERPEDRPAFSRLLRQL 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +++G E F E E++ H L++LYG C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV+ +M +G ++ L+ + + T + L G+ YL E C +IHRD+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 129
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 190 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +++G E F E E++ H L++LYG C+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV+ +M +G ++ L+ + + T + L G+ YL E C +IHRD+
Sbjct: 71 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 127
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 128 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 188 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 228 STHVYQIMNHCWKERPEDRPAFSRLLRQL 256
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 32/238 (13%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS 352
L++ + + I+G GGFG VY+ + D V R I I+ + E ++ +
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-----LDWSTRKRIALGAA 407
+ H N++ L G C+ LV + G + L GK I ++W A+ A
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIA 115
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCE--------AVVGDFGLAKLLDHQDSHVTT 459
RG+ YLH++ IIHRD+K++NIL+ E + DFGLA+ H+ + ++
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-HRTTKMSA 174
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ--------RALEYGKAANQ 509
A G +APE + S+ +DV+ +G+LL EL+TG+ A+ YG A N+
Sbjct: 175 A--GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK 230
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 171
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 232 KFTTKSDVWSFGVLLWELMT 251
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
LG G FG V+ G + T VAVK LK G +Q F E ++ H L+RLY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 367 MTPTERLLVYPYMSNGSVASRLK----GKPILDWSTRKRIALGA--ARGLLYLHEQCDPK 420
++ YM+ GS+ LK GK +L K I A A G+ Y+ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMAYIERK---N 130
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
IHRD++AAN+L+ + + DFGLA++++ + + + APE ++ G +
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 190
Query: 481 KTDVFGFGILLLELITGQRALEYGK 505
K+DV+ FGILL E++T YGK
Sbjct: 191 KSDVWSFGILLYEIVT------YGK 209
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 205 KFTTKSDVWSFGVLLWELMT 224
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 152
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 147
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 207
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 208 KFTTKSDVWSFGVLLWELMT 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 210
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 170
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 231 KFTTKSDVWSFGVLLWELMT 250
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 152
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 149
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL---DHQDSHVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 210 KFTTKSDVWSFGVLLWELMT 229
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ YL +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASK--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDS---HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + ++ H T + V +A E L T
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 212 KFTTKSDVWSFGVLLWELMT 231
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ +LD + DS H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 103/230 (44%), Gaps = 9/230 (3%)
Query: 276 ERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKD 334
E + EE + + ++ Q A +F LGKG FG VY Q ++A+K L
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 335 GN--AIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKP 392
G E Q + EVE+ S H N+LRLYG+ T L+ Y G+V L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 393 ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
D A L Y H + ++IHRD+K N+LL E + DFG + H
Sbjct: 130 KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---H 183
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
S T + GT+ ++ PE + EK D++ G+L E + G+ E
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLP 175
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQDGT-VVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY ++ ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + K+IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 124 CHSK---KVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 191
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 192 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +++G E F E E++ H L++LYG C+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV +M +G ++ L+ + + T + L G+ YL E C +IHRD+
Sbjct: 74 EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDL 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 131 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 191 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 230
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 231 STHVYQIMNHCWRERPEDRPAFSRLLRQL 259
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 95/213 (44%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLXGTLDYLP 179
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 179
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 122
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 123 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 174
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 175
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLP 179
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 180
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S A+ GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRAALCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 127
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 211 KFTTKSDVWSFGVLLWELMT 230
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 121 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 174
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 152
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 213 KFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 211
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 272 KFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 157
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 218 KFTTKSDVWSFGVLLWELMT 237
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 307 ILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
++G+G FG VY G L DG + AVK L IG QF TE ++ H N+L L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 363 YGFCM-TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AARGLLYLHEQCDP 419
G C+ + L+V PYM +G + + ++ + + + + I G A+G+ +L +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASK--- 153
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQ-DS-HVTTAVRGTVGHIAPEYLSTG 476
K +HRD+ A N +LD+ V DFGLA+ + D + DS H T + V +A E L T
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 477 QSSEKTDVFGFGILLLELIT 496
+ + K+DV+ FG+LL EL+T
Sbjct: 214 KFTTKSDVWSFGVLLWELMT 233
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
LG G FG V+ G + T VAVK LK G +Q F E ++ H L+RLY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 367 MTPTERLLVYPYMSNGSVASRLK----GKPILDWSTRKRIALGA--ARGLLYLHEQCDPK 420
++ +M+ GS+ LK GK +L K I A A G+ Y+ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP----KLIDFSAQIAEGMAYIERK---N 129
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
IHRD++AAN+L+ + + DFGLA++++ + + + APE ++ G +
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTI 189
Query: 481 KTDVFGFGILLLELITGQRALEYGK 505
K++V+ FGILL E++T YGK
Sbjct: 190 KSNVWSFGILLYEIVT------YGK 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 30/269 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G G FG+V+ G + VA+K +++G E F E E++ H L++LYG C+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 368 TPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
LV+ +M +G ++ L+ + + T + L G+ YL E +IHRD+
Sbjct: 73 EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDL 129
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
A N L+ + V DFG+ + + +T + V +PE S + S K+DV+
Sbjct: 130 AARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 487 FGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNY----DRIE 542
FG+L+ E+ + KI E + V +D+ + R+
Sbjct: 190 FGVLMWEVFSE--------------------GKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ Q+ C + P RP S ++R L
Sbjct: 230 STHVYQIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 176
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK GN F E +++ H L++LY +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 249
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 306
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGL +L++ + + + APE G+ + K+DV+
Sbjct: 307 LRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 486 GFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
FGILL EL T R + Y N++ +LD V++
Sbjct: 367 SFGILLTELTTKGR-VPYPGMVNRE--VLDQVER 397
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
FGILL EL T R + Y N++ +LD V++
Sbjct: 200 SFGILLTELTTKGR-VPYPGMVNRE--VLDQVER 230
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + +FG + H S T + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLP 177
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 71
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 128
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 129 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 189 SFGILLTELTTKGR 202
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 72
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 129
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 486 GFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
FGILL EL T R + Y N++ +LD V++
Sbjct: 190 SFGILLTELTTKGR-VPYPGMVNRE--VLDQVER 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 102/230 (44%), Gaps = 9/230 (3%)
Query: 276 ERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKD 334
E + EE + + ++ Q A +F LGKG FG VY Q ++A+K L
Sbjct: 10 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 69
Query: 335 GN--AIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKP 392
G E Q + EVE+ S H N+LRLYG+ T L+ Y G+V L+
Sbjct: 70 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 129
Query: 393 ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
D A L Y H + ++IHRD+K N+LL E + DFG + H
Sbjct: 130 KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---H 183
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
S + GT+ ++ PE + EK D++ G+L E + G+ E
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLCGTLDYLP 175
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 176
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 75
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 132
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 193 SFGILLTELTTKGR 206
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 73
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 130
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 131 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 191 SFGILLTELTTKGR 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKIRHEKLVQLYA-VV 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 124 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLPPEM 177
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVE 349
++ Q A +F LGKG FG VY Q ++A+K L G E Q + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ S H N+LRLYG+ T L+ Y G+V L+ D A
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L Y H + ++IHRD+K N+LL E + DFG + H S + GT+ ++
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRXXLCGTLDYLP 177
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
PE + EK D++ G+L E + G+ E
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 331
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 388
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 486 GFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
FGILL EL T R + Y N++ +LD V++
Sbjct: 449 SFGILLTELTTKGR-VPYPGMVNRE--VLDQVER 479
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 248
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 305
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 306 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 94/210 (44%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMIS 352
Q A +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY 126
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 127 CHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPPEM 180
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G+ E
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS GS+ LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS G + LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAV-V 82
Query: 368 TPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YMS G + LKG+ L +A A G+ Y+ +HRD
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRD 139
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 140 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
+ +V YM+ GS+ LKG+ + + + A A G+ Y+ +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 197 SFGILLTELTTKGR 210
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGLA++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 97/194 (50%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYA-VV 79
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
+ +V YM+ GS+ LKG+ + + + A A G+ Y+ +HRD
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM---NYVHRD 136
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + V DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 486 GFGILLLELITGQR 499
FGILL EL T R
Sbjct: 197 SFGILLTELTTKGR 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 105/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 20 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 367 MTPTERLLVYPYMSNGSV--------ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS ++ + K ++D IA ARG+ YLH +
Sbjct: 78 TKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLID------IARQTARGMDYLHAKS- 128
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 129 --IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 219
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMIS 352
Q +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S T + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 181
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 109/216 (50%), Gaps = 27/216 (12%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGIL----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMI 351
+V TH S ++GKG FG+VY G Q+ A+K L + F E ++
Sbjct: 20 RVVTH---SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 352 SLAVHRNLLRLYGFCMTPTERL--LVYPYMSNGSVASRLKGKPILDWSTRKRIALG--AA 407
H N+L L G M P E L ++ PYM +G + ++ P + + + I+ G A
Sbjct: 77 RGLNHPNVLALIGI-MLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVA 134
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLD------HQDSHVTTA 460
RG+ YL EQ K +HRD+ A N +LD+ V DFGLA+ +LD Q H
Sbjct: 135 RGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP 191
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
V+ T A E L T + + K+DV+ FG+LL EL+T
Sbjct: 192 VKWT----ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 136/303 (44%), Gaps = 41/303 (13%)
Query: 290 FQFRELQVATHNFSSK---------NILGKGGFGIVYKGILQ----DGTVVAVKRLKDGN 336
F F + A F+ + ++G G FG V G L+ VA+K LK G
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 337 AIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW 396
F +E ++ H N++ L G T +++ +M NGS+ S L+ +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQF 132
Query: 397 STRKRIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DH 452
+ + + + G A G+ YL D +HRD+ A NIL++ V DFGL++ L D
Sbjct: 133 TVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 189
Query: 453 QDSHVTTAVRGTVG--HIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQ 509
D T+A+ G + APE + + + +DV+ +GI++ E+++ G+R Y NQ
Sbjct: 190 SDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQ 247
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
D + I Q+ +L +D + Q+ L C Q HRPK ++V
Sbjct: 248 -----DVINAIEQDYRLPPPMDCP----------SALHQLMLDCWQKDRNHRPKFGQIVN 292
Query: 570 MLE 572
L+
Sbjct: 293 TLD 295
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 245
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 246 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYLS 152
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 153 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 209
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 210 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 262
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 263 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 135/281 (48%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 161
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 162 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 219
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 220 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 272
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 273 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 302 FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F+ +GKG FG V+KGI + VVA+K + A Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
+ YG + T+ ++ Y+ GS L+ P LD + I +GL YLH + K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 124
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
IHRD+KAAN+LL + E + DFG+A L T V GT +APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKD----LKN 536
K D++ GI +EL G+ ++H K L L+ K+ L+
Sbjct: 184 KADIWSLGITAIELARGEPPHS----------------ELHPMKVL-FLIPKNNPPTLEG 226
Query: 537 NYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
NY + L+E V+ C P+ RP E+++
Sbjct: 227 NYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG V+ G T VA+K LK G F E +++ H L++LY +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTM--SPESFLEEAQIMKKLKHDKLVQLYA-VV 73
Query: 368 TPTERLLVYPYMSNGSVASRLKGKP--ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ +V YM+ GS+ LK L +A A G+ Y+ IHRD
Sbjct: 74 SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRD 130
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+++ANIL+ + + DFGLA+L++ + + + APE G+ + K+DV+
Sbjct: 131 LRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 486 GFGILLLELITGQR 499
FGILL EL+T R
Sbjct: 191 SFGILLTELVTKGR 204
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 302 FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F+ +GKG FG V+KGI + VVA+K + A Q E+ ++S +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
+ YG + T+ ++ Y+ GS L+ P LD + I +GL YLH + K
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 144
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
IHRD+KAAN+LL + E + DFG+A L T V GT +APE +
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKD----LKN 536
K D++ GI +EL G+ ++H K L L+ K+ L+
Sbjct: 204 KADIWSLGITAIELARGEPPHS----------------ELHPMKVL-FLIPKNNPPTLEG 246
Query: 537 NYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
NY + L+E V+ C P+ RP E+++
Sbjct: 247 NYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 275
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V YM NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL ++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 367 MTPTERLLVYPYMSNGSV--------ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS ++ + K ++D IA ARG+ YLH +
Sbjct: 90 TAP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLID------IARQTARGMDYLHAKS- 140
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA SH + G++ +APE +
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 231
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 32 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 367 MTPTERLLVYPYMSNGSV--------ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS ++ + K ++D IA ARG+ YLH +
Sbjct: 90 TKP--QLAIVTQWCEGSSLYHHLHASETKFEMKKLID------IARQTARGMDYLHAKS- 140
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA SH + G++ +APE +
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 231
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 29/207 (14%)
Query: 306 NILGKGGFGIVYKGI-LQDGTVV----AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+LG G FG VYKGI + +G V A+K L + ++F E +++ H +L+
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 361 RLYGFCMTPTER----------LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
RL G C++PT + LL Y + ++ S+L +L+W + A+G+
Sbjct: 81 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQ------IAKGM 130
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD-HQDSHVTTAVRGTVGHIA 469
+YL E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + + +A
Sbjct: 131 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELIT 496
E + + + ++DV+ +G+ + EL+T
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 108/207 (52%), Gaps = 29/207 (14%)
Query: 306 NILGKGGFGIVYKGI-LQDGTVV----AVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+LG G FG VYKGI + +G V A+K L + ++F E +++ H +L+
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 361 RLYGFCMTPTER----------LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
RL G C++PT + LL Y + ++ S+L +L+W + A+G+
Sbjct: 104 RLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQ------IAKGM 153
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD-HQDSHVTTAVRGTVGHIA 469
+YL E+ +++HRD+ A N+L+ + DFGLA+LL+ + + + + +A
Sbjct: 154 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELIT 496
E + + + ++DV+ +G+ + EL+T
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMIS 352
Q +F LGKG FG VY Q ++A+K L G E Q + EVE+ S
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+LRLYG+ T L+ Y G+V L+ D A L Y
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSY 127
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
H + ++IHRD+K N+LL E + DFG + H S + GT+ ++ PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEM 181
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
+ EK D++ G+L E + G E
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG V+ T VAVK +K G ++ E F E ++ H L++L+ +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVE-AFLAEANVMKTLQHDKLVKLHA-VV 79
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
T ++ +M+ GS+ LK K I A A G+ ++ ++ IHRD
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 136
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + DFGLA++++ + + + APE ++ G + K+DV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 486 GFGILLLELITGQR 499
FGILL+E++T R
Sbjct: 197 SFGILLMEIVTYGR 210
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 136/299 (45%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + ++ ++
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYY 186
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 238
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 239 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 302 FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F+ +GKG FG V+KGI + VVA+K + A Q E+ ++S +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
+ YG + T+ ++ Y+ GS L+ P LD + I +GL YLH + K
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 139
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
IHRD+KAAN+LL + E + DFG+A +L D Q GT +APE +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIKQSAYD 197
Query: 480 EKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKD----LK 535
K D++ GI +EL G+ ++H K L L+ K+ L+
Sbjct: 198 SKADIWSLGITAIELARGEPPHS----------------ELHPMKVL-FLIPKNNPPTLE 240
Query: 536 NNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
NY + L+E V+ C P+ RP E+++
Sbjct: 241 GNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 33/274 (12%)
Query: 302 FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F+ +GKG FG V+KGI + VVA+K + A Q E+ ++S +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
+ YG + T+ ++ Y+ GS L+ P LD + I +GL YLH + K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-LDETQIATILREILKGLDYLHSE---K 124
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
IHRD+KAAN+LL + E + DFG+A +L D Q GT +APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NXFVGTPFWMAPEVIKQSAYD 182
Query: 480 EKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKD----LK 535
K D++ GI +EL G+ ++H K L L+ K+ L+
Sbjct: 183 SKADIWSLGITAIELARGEPPHS----------------ELHPMKVL-FLIPKNNPPTLE 225
Query: 536 NNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
NY + L+E V+ C P+ RP E+++
Sbjct: 226 GNYSK-PLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 186
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 238
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 239 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 188 KGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 238
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 239 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 289
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + D
Sbjct: 128 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDX-X 183
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 184 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 235
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 236 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG V+ T VAVK +K G+ F E ++ H L++L+ +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHA-VV 252
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
T ++ +M+ GS+ LK K I A A G+ ++ ++ IHRD
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 309
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + DFGLA++++ + + + APE ++ G + K+DV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 486 GFGILLLELITGQR 499
FGILL+E++T R
Sbjct: 370 SFGILLMEIVTYGR 383
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HRD+ A N ++ +GDFG+ + + D
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 188 KGG-KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 238
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 239 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 9/219 (4%)
Query: 283 SLGNLRRFQFRELQVATHN-FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGG 340
S+ +LR F + +V F+ + +GKG FG VYKGI VVA+K + A
Sbjct: 1 SMAHLRGFANQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDE 60
Query: 341 EIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRK 400
Q E+ ++S + R +G + T+ ++ Y+ GS LK P L+ +
Sbjct: 61 IEDIQQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGP-LEETYIA 119
Query: 401 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTT 459
I +GL YLH + + IHRD+KAAN+LL + + + DFG+A +L D Q
Sbjct: 120 TILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--N 174
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
GT +APE + K D++ GI +EL G+
Sbjct: 175 XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 228
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+ + K+ LG G FG VY+G+ + ++ VAVK LK+ E F E ++ H NL
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 69
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
++L G C ++ +M+ G++ L+ R+ ++ A LLY+ Q
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISS 120
Query: 420 KI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ IHRD+ A N L+ + V DFGL++L+ + + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
L+ + S K+DV+ FG+LL E+ T YG + I + E+L +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP---------YPGIDPSQVYELL-E 224
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V M NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYLS 135
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 136 ---DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 192
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 193 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 245
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 246 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 32/279 (11%)
Query: 305 KNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ ++G G FG V G L+ VA+K LK G F +E ++ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCD 418
L G T +++ +M NGS+ S L+ ++ + + + G A G+ YL D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYL---AD 127
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG--HIAPEYLS 474
+HR + A NIL++ V DFGL++ L D D T+A+ G + APE +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 475 TGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKD 533
+ + +DV+ +GI++ E+++ G+R Y NQ D + I Q+ +L +D
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQ-----DVINAIEQDYRLPPPMDCP 240
Query: 534 LKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q HRPK ++V L+
Sbjct: 241 ----------SALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V M NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 18 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 76 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 126
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 127 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 217
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 134/281 (47%), Gaps = 30/281 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N S ++G G FG V G L+ VA+K LK G F E ++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLH 414
N++RL G ++V M NGS+ S L+ K ++ + + + G A G+ YL
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQLVGMLRGIASGMKYL- 163
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEY 472
D +HRD+ A NIL++ V DFGL+++L D + ++ T + + +PE
Sbjct: 164 --SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA 221
Query: 473 LSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
++ + + +DV+ +GI+L E+++ G+R Y + +NQ D +K + + +L +D
Sbjct: 222 IAYRKFTSASDVWSYGIVLWEVMSYGERP--YWEMSNQ-----DVIKAVDEGYRLPPPMD 274
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q +RPK ++V +L+
Sbjct: 275 CP----------AALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 74 TAP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 124
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 215
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 228
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 63
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 124 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 224
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 228
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 79 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 129
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 225
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 43 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 101 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 151
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 152 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 209
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 242
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 63
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 124 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 224
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 225 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 268
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 152
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 243
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 66
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 127 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 227
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 228 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 21 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 79 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 129
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 104/215 (48%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 74 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 124
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA + SH + G++ +APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+ H NL++L G C ++ +M+ G++ L+ R+ ++ A L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVL 113
Query: 411 LYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
LY+ Q + IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+ APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--- 223
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 ------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 223
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+ H NL++L G C ++ +M+ G++ L+ R+ ++ A L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVL 118
Query: 411 LYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
LY+ Q + IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 119 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 178
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+ APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 179 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--- 228
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 229 ------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 38/285 (13%)
Query: 308 LGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG+G FG+VY+G +D T VAVK + + ++ I+F E ++ +++R
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWSTRKRIALGAARGLL 411
L G L+V M++G + S L+ G+P ++A A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRG--TVGHIA 469
YL+ + K +HRD+ A N ++ +GDFG+ + + ++ + +G V +A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMA 199
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEML 529
PE L G + +D++ FG++L E IT Y +N E+ L+ +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN--------------EQVLKFV 244
Query: 530 VDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
+D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 245 MDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 288
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 128 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 228
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 229 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 272
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 123 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 223
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+ H NL++L G C ++ +M+ G++ L+ R+ ++ A L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVVL 113
Query: 411 LYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
LY+ Q + IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+ APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--- 223
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 ------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+ H NL++L G C ++ +M+ G++ L+ R+ ++ A L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVVL 113
Query: 411 LYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
LY+ Q + IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+ APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--- 223
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 ------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+ H NL++L G C ++ +M+ G++ L+ R+ ++ A L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVL 113
Query: 411 LYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
LY+ Q + IHRD+ A N L+ + V DFGL++L+ +
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 173
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+ APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 174 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--- 223
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 224 ------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 132/300 (44%), Gaps = 51/300 (17%)
Query: 305 KNILGKGGFGIVYKG------ILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRN 358
K LG+G FG V+ +D +VAVK LKD + FQ E E+++ H +
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEH 78
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLK-----------GKPI-----LDWSTRKRI 402
+++ YG C ++V+ YM +G + L+ G+P L S I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-----SHV 457
A A G++YL Q +HRD+ N L+ +GDFG+++ + D H
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 458 TTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+R + PE + + + ++DV+ FG++L E+ T YGK + + + +
Sbjct: 196 MLPIRW----MPPESIMYRKFTTESDVWSFGVILWEIFT------YGKQPWFQLSNTEVI 245
Query: 518 KKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLA 577
+ I Q + LE R+ +E+ V L C Q P R + E+ ++L G A
Sbjct: 246 ECITQGRVLER----------PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGKA 295
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 131
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HR++ A N ++ +GDFG+ + + ++ +
Sbjct: 132 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 187
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 239
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 240 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 290
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 225
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD------GTVVAVKRLKDGNAIGGEIQFQTE 347
E +V+ + LG+G FG+VY+G +D T VAVK + + ++ I+F E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------GKPILDWS 397
++ +++RL G L+V M++G + S L+ G+P
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ + K +HR++ A N ++ +GDFG+ + + ++ +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYY 186
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V +APE L G + +D++ FG++L E IT Y +N
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE-ITSLAEQPYQGLSN------- 238
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGD 574
E+ L+ ++D + D E + + +C Q+ P RP E+V +L+ D
Sbjct: 239 -------EQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDD 289
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 75
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 136 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 236
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 237 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 280
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+ + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E ++ H NL
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 69
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
++L G C ++ +M+ G++ L+ R+ ++ A LLY+ Q
Sbjct: 70 VQLLGVCTREPPFYIIIEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISS 120
Query: 420 KI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ IHRD+ A N L+ + V DFGL++L+ + + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
L+ + S K+DV+ FG+LL E+ T YG + I + E+L +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP---------YPGIDPSQVYELL-E 224
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 24/284 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEM 350
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAAR 408
+ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ YL ++ IHRD+ A N L+ + V DFGL++L+ + +
Sbjct: 125 AMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE--------- 225
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 226 LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 269
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 39/293 (13%)
Query: 298 ATHNFSSK---------NILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQF 344
A H F+ + ++G G FG V G L+ VA+K LK G F
Sbjct: 11 AVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDF 70
Query: 345 QTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL 404
E ++ H N++ L G ++V YM NGS+ + LK K ++ + + +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK-KNDGQFTVIQLVGM 129
Query: 405 --GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTA 460
G + G+ YL D +HRD+ A NIL++ V DFGL+++L D + ++ T
Sbjct: 130 LRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 186
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKK 519
+ + APE ++ + + +DV+ +GI++ E+++ G+R Y + NQ D +K
Sbjct: 187 GKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP--YWEMTNQ-----DVIKA 239
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + +L +D + Q+ L C Q RPK E+V ML+
Sbjct: 240 VEEGYRLPSPMDCPAA----------LYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 286 NLRRFQFRELQVATHNFSSKNILGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGG 340
N+ +F+ R L+ LGKG FG V LQD G VVAVK+L+
Sbjct: 21 NMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 341 EIQFQTEVEMISLAVHRNLLRLYGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWS 397
F+ E+E++ H N+++ G C + R L+ Y+ GS+ L K K +D
Sbjct: 74 R-DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDS 455
+ +G+ YL + + IHRD+ NIL+++ +GDFGL K+L D +
Sbjct: 133 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 189
Query: 456 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
V + APE L+ + S +DV+ FG++L EL T
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 286 NLRRFQFRELQVATHNFSSKNILGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGG 340
N+ +F+ R L+ LGKG FG V LQD G VVAVK+L+
Sbjct: 21 NMTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 73
Query: 341 EIQFQTEVEMISLAVHRNLLRLYGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWS 397
F+ E+E++ H N+++ G C + R L+ Y+ GS+ L K K +D
Sbjct: 74 R-DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 132
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDS 455
+ +G+ YL + + IHRD+ NIL+++ +GDFGL K+L D +
Sbjct: 133 KLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXX 189
Query: 456 HVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
V + APE L+ + S +DV+ FG++L EL T
Sbjct: 190 KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 134
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 124/270 (45%), Gaps = 30/270 (11%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VAVK +K+G+ E FQ M+ L+ H L++ YG C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEF-FQEAQTMMKLS-HPKLVKFYGVCS 73
Query: 368 TPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+V Y+SNG + + L+ GK L+ S + G+ +L + IHRD
Sbjct: 74 KEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESH---QFIHRD 129
Query: 426 VKAANILLD-DCCEAVVGDFGLAK-LLDHQDSHVTTA-VRGTVGHIAPEYLSTGQSSEKT 482
+ A N L+D D C V DFG+ + +LD D +V++ + V APE + S K+
Sbjct: 130 LAARNCLVDRDLC-VKVSDFGMTRYVLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 483 DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIE 542
DV+ FGIL+ E+ + GK + V K+ Q +L +
Sbjct: 187 DVWAFGILMWEVFS------LGKMPYDLYTNSEVVLKVSQGHRLYR----------PHLA 230
Query: 543 LEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + Q+ C LP RP +++ +E
Sbjct: 231 SDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 36 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 94 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 144
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA SH + G++ +APE +
Sbjct: 145 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 202
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 130
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 131 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 190 TFSHASDTWMFGVTLWEMFT 209
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 140
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 75
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 132
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 192
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 107
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 164
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 224
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 86 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 140
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 141 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 200 TFSHASDTWMFGVTLWEMFT 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 16 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 74 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 124
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA SH + G++ +APE +
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 39/301 (12%)
Query: 290 FQFRELQVATHNFSSK---------NILGKGGFGIVYKGILQ----DGTVVAVKRLKDGN 336
F F + A F+ + ++G G FG V G L+ VA+K LK G
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 337 AIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW 396
F +E ++ H N++ L G +++ YM NGS+ + L+ K +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRF 128
Query: 397 STRKRIAL--GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DH 452
+ + + + G G+ YL D +HRD+ A NIL++ V DFG++++L D
Sbjct: 129 TVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP 185
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKG 511
+ ++ T + + APE ++ + + +DV+ +GI++ E+++ G+R Y +NQ
Sbjct: 186 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-- 241
Query: 512 AMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
D +K I + +L +D + + Q+ L C Q + RPK ++V ML
Sbjct: 242 ---DVIKAIEEGYRLPPPMDCPIA----------LHQLMLDCWQKERSDRPKFGQIVNML 288
Query: 572 E 572
+
Sbjct: 289 D 289
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 17/200 (8%)
Query: 308 LGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEI--QFQTEVEMISLAVHRNLLR 361
LG G FG+V +G VAVK LK E F EV + HRNL+R
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAARGLLYLHEQCD 418
LYG +TP ++ V GS+ RL+ G +L T R A+ A G+ YL +
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLL--GTLSRYAVQVAEGMGYLESK-- 134
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV--GHIAPEYLSTG 476
+ IHRD+ A N+LL +GDFGL + L D H V APE L T
Sbjct: 135 -RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 477 QSSEKTDVFGFGILLLELIT 496
S +D + FG+ L E+ T
Sbjct: 194 TFSHASDTWMFGVTLWEMFT 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 74
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 131
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 76
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 38/291 (13%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVE 349
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E++ F E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAA 268
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
++ H NL++L G C ++ +M+ G++ L+ R+ ++ A
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVV 319
Query: 410 LLYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAV 461
LLY+ Q + IHR++ A N L+ + V DFGL++L+
Sbjct: 320 LLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIH 521
+ + APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 380 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-- 430
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 431 -------LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 474
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 82
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 139
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 81
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 138
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 198
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 103/215 (47%), Gaps = 28/215 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK L ++Q F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 367 MTPTERLLVYPYMSNGS--------VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
P +L + GS + ++ + ++D IA A+G+ YLH +
Sbjct: 102 TKP--QLAIVTQWCEGSSLYHHLHIIETKFEMIKLID------IARQTAQGMDYLHAKS- 152
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQ 477
IIHRD+K+ NI L + +GDFGLA SH + G++ +APE +
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 210
Query: 478 S---SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
S ++DV+ FGI+L EL+TGQ L Y N+
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNR 243
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVE 349
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E++ F E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAA 307
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAA 407
++ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+ YL ++ IHR++ A N L+ + V DFGL++L+ + +
Sbjct: 368 SAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 424
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 425 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 469
Query: 528 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 470 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 80
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 137
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 197
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 36/281 (12%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+ + K+ LG G +G VY+G+ + ++ VAVK LK+ E F E ++ H NL
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMKEIKHPNL 69
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
++L G C ++ +M+ G++ L+ R+ ++ A LLY+ Q
Sbjct: 70 VQLLGVCTREPPFYIITEFMTYGNLLDYLRE------CNRQEVS---AVVLLYMATQISS 120
Query: 420 KI--------IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ IHRD+ A N L+ + V DFGL++L+ + + APE
Sbjct: 121 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPE 180
Query: 472 YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVD 531
L+ + S K+DV+ FG+LL E+ T YG + I + E+L +
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP---------YPGIDPSQVYELL-E 224
Query: 532 KDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 225 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 76
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 83
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 140
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 135/285 (47%), Gaps = 26/285 (9%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQ-FQTEVE 349
+ + ++ + + K+ LG G +G VY+G+ + ++ VAVK LK+ E++ F E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAA 265
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK--GKPILDWSTRKRIALGAA 407
++ H NL++L G C ++ +M+ G++ L+ + ++ +A +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+ YL ++ IHR++ A N L+ + V DFGL++L+ + +
Sbjct: 326 SAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 382
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE L+ + S K+DV+ FG+LL E+ T YG + G L V +
Sbjct: 383 TAPESLAYNKFSIKSDVWAFGVLLWEIAT------YGMSP-YPGIDLSQVYE-------- 427
Query: 528 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L++KD + E++ ++ C Q+ P+ RP +E+ + E
Sbjct: 428 -LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 302 FSSKNILGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F+ +GKG FG V+KGI + VVA+K + A Q E+ ++S +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
+ YG + ++ ++ Y+ GS L+ P ++ + +GL YLH + K
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSE---K 140
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
IHRD+KAAN+LL + + + DFG+A L T V GT +APE +
Sbjct: 141 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDS 199
Query: 481 KTDVFGFGILLLELITGQ 498
K D++ GI +EL G+
Sbjct: 200 KADIWSLGITAIELAKGE 217
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 305 KNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ ++G G FG V G L+ VA+K LK G F +E ++ H N++
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCD 418
L G +++ YM NGS+ + L+ K ++ + + + G G+ YL D
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLS---D 128
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTG 476
+HRD+ A NIL++ V DFG++++L D + ++ T + + APE ++
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 188
Query: 477 QSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ + +DV+ +GI++ E+++ G+R Y +NQ D +K I + +L +D +
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKAIEEGYRLPPPMDCPIA 241
Query: 536 NNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q + RPK ++V ML+
Sbjct: 242 ----------LHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 305 KNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ ++G G FG V G L+ VA+K LK G F +E ++ H N++
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCD 418
L G +++ YM NGS+ + L+ K ++ + + + G G+ YL D
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGSGMKYLS---D 134
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTG 476
+HRD+ A NIL++ V DFG++++L D + ++ T + + APE ++
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR 194
Query: 477 QSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ + +DV+ +GI++ E+++ G+R Y +NQ D +K I + +L +D +
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKAIEEGYRLPPPMDCPIA 247
Query: 536 NNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ Q+ L C Q + RPK ++V ML+
Sbjct: 248 ----------LHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 16/256 (6%)
Query: 296 QVATHNFSSKNILGKGGFGIVY-KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVE--MIS 352
+ + +F LG G FG V+ +G A+K LK + + T E M+S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
+ H ++R++G + ++ Y+ G + S L+ K A L Y
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + II+RD+K NILLD + DFG AK + VT + GT +IAPE
Sbjct: 122 LHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV 174
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDK 532
+ST ++ D + FGIL+ E++ G M + K ++ E + ++
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTPF------YDSNTMKTYEKILNAELRFPPFFNE 228
Query: 533 DLKNNYDRIELEEMVQ 548
D+K+ R+ ++ Q
Sbjct: 229 DVKDLLSRLITRDLSQ 244
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 38/282 (13%)
Query: 305 KNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ ++G G FG V +G L+ + VA+K LK G +F +E ++ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL-----GAARGLLYLHE 415
RL G +++ +M NG++ S L+ L+ I L G A G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ--DSHVTTAVRGTVG--HIAPE 471
+HRD+ A NIL++ V DFGL++ L+ D T+++ G + APE
Sbjct: 135 M---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 472 YLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
++ + + +D + +GI++ E+++ G+R Y +NQ D + I Q+ +L
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQ-----DVINAIEQDYRLPPPP 244
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
D + Q+ L C Q RP+ +VV L+
Sbjct: 245 DCPTS----------LHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 133/284 (46%), Gaps = 36/284 (12%)
Query: 306 NILGKGGFGIVYKGIL--QDGTV--VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLL 360
ILG+G FG V +G L +DGT VAVK +K N+ EI+ F +E + H N++
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 361 RLYGFCMTPTER-----LLVYPYMSNGSV-----ASRLKGKPI-LDWSTRKRIALGAARG 409
RL G C+ + + +++ P+M G + SRL+ P + T + + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAV-RGTVGHI 468
+ YL + +HRD+ A N +L D V DFGL+K + D + + + V I
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
A E L+ + K+DV+ FG+ + E+ T + Y N + M D++ H+ K+ E
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIAT-RGMTPYPGVQNHE--MYDYLLHGHRLKQPED 273
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+D E+ ++ C + P RP S + LE
Sbjct: 274 CLD-------------ELYEIMYSCWRTDPLDRPTFSVLRLQLE 304
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
+G G +G K + DG ++ K L G+ E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 366 CM--TPTERLLVYPYMSNGSVASRL----KGKPILDWSTRKRIALGAARGLLYLHEQCD- 418
+ T T +V Y G +AS + K + LD R+ L H + D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
++HRD+K AN+ LD +GDFGLA++L+H S T V GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGFGILLLEL 494
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 185
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 186 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 231
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 232 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 181
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 227
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 228 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 194
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 240
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 241 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 184
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 230
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 231 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 194
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 240
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 241 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 188
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 234
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 235 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 187
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 233
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 234 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ ++ GS+ L K K +D + +G+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + ++ +
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYY 187
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 233
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 234 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 76
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 133
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHRD+ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 79
Query: 363 YGFCMTPTER--LLVYPYMSNGSV-------ASRLKGKPILDWSTRKRIALGAARGLLYL 413
G C + R L+ Y+ GS+ A R+ +L ++++ +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYL 133
Query: 414 HEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPE 471
+ + IHRD+ NIL+++ +GDFGL K+L D + V + APE
Sbjct: 134 GTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 472 YLSTGQSSEKTDVFGFGILLLELIT 496
L+ + S +DV+ FG++L EL T
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + D
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 181 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 225
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + ++++ +C QY P RP E++
Sbjct: 226 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 149/333 (44%), Gaps = 38/333 (11%)
Query: 254 LVFGLFLWWRQRRNQQMFFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGF 313
LV L+++ R+R N ++ V + E +VA + LG+G F
Sbjct: 1 LVIMLYVFHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSF 60
Query: 314 GIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
G+VY KG+++D T VA+K + + ++ I+F E ++ +++RL G
Sbjct: 61 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 120
Query: 368 TPTERLLVYPYMSNGSVASRLK-------GKPIL---DWSTRKRIALGAARGLLYLHEQC 417
L++ M+ G + S L+ P+L S ++A A G+ YL+
Sbjct: 121 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN- 179
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRG--TVGHIAPEYLST 475
K +HRD+ A N ++ + +GDFG+ + + ++ + +G V ++PE L
Sbjct: 180 --KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPVRWMSPESLKD 236
Query: 476 GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
G + +DV+ FG++L E+ T A Q + + E+ L +++ L
Sbjct: 237 GVFTTYSDVWSFGVVLWEIAT---------LAEQP------YQGLSNEQVLRFVMEGGLL 281
Query: 536 NNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ D + + ++ +C QY P RP E++
Sbjct: 282 DKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQDG--TVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N ++ + +GDFG+ + + D
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 190 KGG-KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 234
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + + ++ +C QY P RP E++
Sbjct: 235 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
+G G +G K + DG ++ K L G+ E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 366 CM--TPTERLLVYPYMSNGSVASRL----KGKPILDWSTRKRIALGAARGLLYLHEQCD- 418
+ T T +V Y G +AS + K + LD R+ L H + D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
++HRD+K AN+ LD +GDFGLA++L+H D+ A GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKAFVGTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGFGILLLEL 494
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 38/282 (13%)
Query: 305 KNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ ++G G FG V +G L+ + VA+K LK G +F +E ++ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL-----GAARGLLYLHE 415
RL G +++ +M NG++ S L+ L+ I L G A G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLR----LNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ--DSHVTTAVRGTVG--HIAPE 471
+HRD+ A NIL++ V DFGL++ L+ D T+++ G + APE
Sbjct: 137 M---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 472 YLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
++ + + +D + +GI++ E+++ G+R Y +NQ D + I Q+ +L
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERP--YWDMSNQ-----DVINAIEQDYRLPPPP 246
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
D + Q+ L C Q RP+ +VV L+
Sbjct: 247 DCPTS----------LHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 32/238 (13%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+ HN K LG+G FG V+ QD +VAVK LKD + F E E
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-NARKDFHREAE 67
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-----------GKPI--LDW 396
+++ H ++++ YG C+ ++V+ YM +G + L+ G P L
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 397 STRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-- 454
S IA A G++YL Q +HRD+ N L+ + +GDFG+++ + D
Sbjct: 128 SQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 455 ---SHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
H +R + PE + + + ++DV+ G++L E+ T + Y + N+
Sbjct: 185 RVGGHTMLPIRW----MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE 238
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 52/315 (16%)
Query: 300 HNFSSKNILGKGGFGIVYK----GIL--QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
+N +G+G FG V++ G+L + T+VAVK LK+ + + FQ E +++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK------------------------ 389
+ N+++L G C L++ YM+ G + L+
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 390 GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKL 449
G P L + + IA A G+ YL E+ K +HRD+ N L+ + + DFGL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 450 LDHQDSHVTTAVRGT-VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
+ D + + + PE + + + ++DV+ +G++L E+ + YG A
Sbjct: 224 IYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-- 281
Query: 509 QKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
E+ + + D ++ + L E+ + LC LPA RP +
Sbjct: 282 -------------HEEVIYYVRDGNILACPENCPL-ELYNLMRLCWSKLPADRPSFCSIH 327
Query: 569 RMLEGDGLAERWEAS 583
R+L+ + ER E +
Sbjct: 328 RILQ--RMCERAEGT 340
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVY----KGILQD--GTVVAVKRLKDGNAIGGEIQFQTE 347
E +VA + LG+G FG+VY KG+++D T VA+K + + ++ I+F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPIL---DWS 397
++ +++RL G L++ M+ G + S L+ P+L S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 398 TRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV 457
++A A G+ YL+ K +HRD+ A N + + +GDFG+ + + ++ +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYY 181
Query: 458 TTAVRG--TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+G V ++PE L G + +DV+ FG++L E+ T A Q
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------LAEQP----- 227
Query: 516 WVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
+ + E+ L +++ L + D + ++++ +C QY P RP E++
Sbjct: 228 -YQGLSNEQVLRFVMEGGLLDKPDNCP-DMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
++ + ++G G +V VA+KR+ + E++ +S H N+
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLK--------GKPILDWSTRKRIALGAARGLL 411
+ Y + E LV +S GSV +K +LD ST I GL
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGH 467
YLH+ IHRDVKA NILL + + DFG++ L D + V GT
Sbjct: 131 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 468 IAPEYLSTGQSSE-KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKL 526
+APE + + + K D++ FGI +EL TG A Y K K ML + L
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQ---NDPPSL 242
Query: 527 EMLV-DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
E V DK++ Y + +M+ LC Q P RP +E++R
Sbjct: 243 ETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 282
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G FG V+ G L+ D T+VAVK ++ + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+V + G + L+ + L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI-----APEYLSTGQSSE 480
+ A N L+ + + DFG+++ +++ A G + + APE L+ G+ S
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 540
++DV+ FGILL E + A Y +NQ+ ++V+K + E+ D
Sbjct: 295 ESDVWSFGILLWETFS-LGASPYPNLSNQQ--TREFVEKGGRLPCPELCPDA-------- 343
Query: 541 IELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ ++ C Y P RP S + + L+
Sbjct: 344 -----VFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 27/284 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
++ + ++G G +V VA+KR+ + E++ +S H N+
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLK--------GKPILDWSTRKRIALGAARGLL 411
+ Y + E LV +S GSV +K +LD ST I GL
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGH 467
YLH+ IHRDVKA NILL + + DFG++ L D + V GT
Sbjct: 136 YLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 468 IAPEYLSTGQSSE-KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKL 526
+APE + + + K D++ FGI +EL TG A Y K K ML + L
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATG--AAPYHKYPPMKVLMLTLQ---NDPPSL 247
Query: 527 EMLV-DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
E V DK++ Y + +M+ LC Q P RP +E++R
Sbjct: 248 ETGVQDKEMLKKYGK-SFRKMIS---LCLQKDPEKRPTAAELLR 287
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 30/272 (11%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G FG V+ G L+ D T+VAVK ++ + +F E ++ H N++RL G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+V + G + L+ + L T ++ AA G+ YL +C IHRD
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRD 238
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI-----APEYLSTGQSSE 480
+ A N L+ + + DFG+++ +++ A G + + APE L+ G+ S
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 540
++DV+ FGILL E + A Y +NQ+ ++V+K + E+ D
Sbjct: 295 ESDVWSFGILLWETFS-LGASPYPNLSNQQ--TREFVEKGGRLPCPELCPDA-------- 343
Query: 541 IELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ ++ C Y P RP S + + L+
Sbjct: 344 -----VFRLMEQCWAYEPGQRPSFSTIYQELQ 370
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 308 LGKGGFGIV---YKGILQD--GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V LQD G VVAVK+L+ F+ E+E++ H N+++
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQHDNIVKY 77
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C + R L+ Y+ GS+ L K K +D + +G+ YL +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK--- 134
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ IHR++ NIL+++ +GDFGL K+L D + V + APE L+ +
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 478 SSEKTDVFGFGILLLELIT 496
S +DV+ FG++L EL T
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 39/293 (13%)
Query: 298 ATHNFSSK---------NILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQF 344
A H F+ + ++G G FG V G L+ VA+K LK G F
Sbjct: 32 AVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF 91
Query: 345 QTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL 404
E ++ H N++ L G ++V +M NG++ + L+ K ++ + + +
Sbjct: 92 LCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLR-KHDGQFTVIQLVGM 150
Query: 405 --GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTA 460
G A G+ YL D +HRD+ A NIL++ V DFGL++++ D + + TT
Sbjct: 151 LRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTG 207
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKK 519
+ V APE + + + +DV+ +GI++ E+++ G+R Y +NQ D +K
Sbjct: 208 GKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMSNQ-----DVIKA 260
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
I + +L +D + Q+ L C Q A RPK ++V +L+
Sbjct: 261 IEEGYRLPAPMDCPAG----------LHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHRNLLRLYG 364
+LGKG FG K ++ V V +K+ E Q F EV+++ H N+L+ G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMV--MKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKG-KPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
+ Y+ G++ +K WS R A A G+ YLH IIH
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIH 131
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKL-------------LDHQDSHVTTAVRGTVGHIAP 470
RD+ + N L+ + VV DFGLA+L L D V G +AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 471 EYLSTGQSSEKTDVFGFGILLLELI 495
E ++ EK DVF FGI+L E+I
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 206 AFGVLMWEIYS 216
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 74 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 129
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 190 AFGVLMWEIYS 200
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 131/295 (44%), Gaps = 31/295 (10%)
Query: 305 KNILGKGGFGIVYKGIL----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ I+G G G V G L Q VA+K LK G F +E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCD 418
RL G ++V YM NGS+ + L+ ++ + + + G G+ YL D
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYL---SD 169
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTG 476
+HRD+ A N+L+D V DFGL+++L D ++ TT + + APE ++
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR 229
Query: 477 QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 536
S +DV+ FG+++ E+ L YG+ D + + + +L +
Sbjct: 230 TFSSASDVWSFGVVMWEV------LAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP--- 280
Query: 537 NYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAERWEASQRAEATKS 591
+ Q+ L C A RP+ S++V +L D L R S RA AT S
Sbjct: 281 -------HALHQLMLDCWHKDRAQRPRFSQIVSVL--DALI-RSPESLRATATVS 325
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFC 366
+G G FG VYKG VAVK LK + + Q F+ EV ++ H N+L G+
Sbjct: 44 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
MT +V + S+ L + IA A+G+ YLH + IIHRD
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRD 157
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLSTGQS---SEK 481
+K+ NI L + +GDFGLA + S G+V +APE + + S +
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217
Query: 482 TDVFGFGILLLELITGQRALEYGKAANQ 509
+DV+ +GI+L EL+TG+ L Y N+
Sbjct: 218 SDVYSYGIVLYELMTGE--LPYSHINNR 243
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 191 AFGVLMWEIYS 201
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 90 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 145
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 146 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 205
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 206 AFGVLMWEIYS 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 96/197 (48%), Gaps = 11/197 (5%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
+G G +G K + DG ++ K L G+ E Q +EV ++ H N++R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 366 CM--TPTERLLVYPYMSNGSVASRL----KGKPILDWSTRKRIALGAARGLLYLHEQCD- 418
+ T T +V Y G +AS + K + LD R+ L H + D
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 419 -PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
++HRD+K AN+ LD +GDFGLA++L+H + V GT +++PE ++
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMS 192
Query: 478 SSEKTDVFGFGILLLEL 494
+EK+D++ G LL EL
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 9/207 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 70 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 125
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 486 GFGILLLELITGQRALEYGKAANQKGA 512
FG+L+ E+ + + + Y + N + A
Sbjct: 186 AFGVLMWEIYSLGK-MPYERFTNSETA 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRIA-- 403
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 404 -LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V Y + + G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 72
Query: 363 Y-GFCMTP--TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-- 417
Y G P E LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGC---------LRDFLQRHRARLDASRLLLYSSQICKG 123
Query: 418 -----DPKIIHRDVKAANILLDDCCEAVVGDFGLAKL--LDHQDSHVTTAVRGTVGHIAP 470
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 124 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E LS S ++DV+ FG++L EL T
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 81 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 136
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 137 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 196
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 197 AFGVLMWEIYS 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 8/191 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG+V G + VA+K +K+G+ E +F E +++ H L++LYG C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCDPKIIHRD 425
++ YM+NG + + L+ + + T++ + + + YL + + +HRD
Sbjct: 75 KQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRD 130
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
+ A N L++D V DFGL++ + + + + V PE L + S K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 486 GFGILLLELIT 496
FG+L+ E+ +
Sbjct: 191 AFGVLMWEIYS 201
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY--------KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V K ++ VAVK LKD +E+EM+ + H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P +++S T K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D + TT
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGT-VVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHR 357
+F LGKG FG VY + +VA+K L G E Q + E+E+ + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+LRLY + L+ Y G + L+ D I A L+Y H +
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK- 142
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
K+IHRD+K N+LL E + DFG + H S + GT+ ++ PE +
Sbjct: 143 --KVIHRDIKPENLLLGLKGELKIADFGWSV---HAPSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 478 SSEKTDVFGFGILLLELITGQRALE 502
+EK D++ G+L EL+ G E
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 130/295 (44%), Gaps = 31/295 (10%)
Query: 305 KNILGKGGFGIVYKGIL----QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ I+G G G V G L Q VA+K LK G F +E ++ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL--GAARGLLYLHEQCD 418
RL G ++V YM NGS+ + L+ ++ + + + G G+ YL D
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYL---SD 169
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTG 476
+HRD+ A N+L+D V DFGL+++L D + TT + + APE ++
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFR 229
Query: 477 QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKN 536
S +DV+ FG+++ E+ L YG+ D + + + +L +
Sbjct: 230 TFSSASDVWSFGVVMWEV------LAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP--- 280
Query: 537 NYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAERWEASQRAEATKS 591
+ Q+ L C A RP+ S++V +L D L R S RA AT S
Sbjct: 281 -------HALHQLMLDCWHKDRAQRPRFSQIVSVL--DALI-RSPESLRATATVS 325
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
++ F LG G + VYKG+ + G VA+K +K + G E+ ++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNG---SVASRLKGKPI--LDWSTRKRIALGAARGLL 411
N++RLY T + LV+ +M N + SR G L+ + K +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ HE KI+HRD+K N+L++ + +GDFGLA+ + ++ V T+ + AP+
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPD 178
Query: 472 YLSTGQS-SEKTDVFGFGILLLELITGQ 498
L ++ S D++ G +L E+ITG+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 93/194 (47%), Gaps = 18/194 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG V+ T VAVK +K G+ F E ++ H L++L+ +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHA-VV 246
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--ARGLLYLHEQCDPKIIHRD 425
T ++ +M+ GS+ LK K I A A G+ ++ ++ IHRD
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRD 303
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVF 485
++AANIL+ + DFGLA++ + + APE ++ G + K+DV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 486 GFGILLLELITGQR 499
FGILL+E++T R
Sbjct: 354 SFGILLMEIVTYGR 367
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDW------------STRKRI-- 402
++ L G C ++ Y S G++ L+ + P L++ S++ +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDW------------STRKRI-- 402
++ L G C ++ Y S G++ L+ + P L++ S++ +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH-VTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D + TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVYK----GILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V GI +D VAVK LKD +E+EM+ + H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS-----------TRKRI--- 402
++ L G C ++ Y S G++ L+ + P ++ S T K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAV 461
ARG+ YL Q K IHRD+ A N+L+ + + DFGLA+ +++ D TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+L+ E+ T
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 134/303 (44%), Gaps = 40/303 (13%)
Query: 282 VSLG--NLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAI 338
V LG NL + ++ + + K+ LG G +G VY G+ + ++ VAVK LK+
Sbjct: 12 VDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM- 70
Query: 339 GGEIQ-FQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWS 397
E++ F E ++ H NL++L G C +V YM G++ L+
Sbjct: 71 --EVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRE------C 122
Query: 398 TRKRIALGAARGLLYLHEQCDPKI--------IHRDVKAANILLDDCCEAVVGDFGLAKL 449
R+ + A LLY+ Q + IHRD+ A N L+ + V DFGL++L
Sbjct: 123 NREEVT---AVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL 179
Query: 450 LDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ + + APE L+ S K+DV+ FG+LL E+ T + G +Q
Sbjct: 180 MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ D ++K ++ ++ E K + ++ C ++ PA RP +E +
Sbjct: 240 ---VYDLLEKGYRMEQPEGCPPK-------------VYELMRACWKWSPADRPSFAETHQ 283
Query: 570 MLE 572
E
Sbjct: 284 AFE 286
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 29/215 (13%)
Query: 308 LGKGGFGIVY----KGILQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISL-AVHRN 358
LG+G FG V G+ +D T VAVK LK +E+EM+ + H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 359 LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWSTRKR--------------I 402
++ L G C ++ Y S G++ L+ + P L++S
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAV 461
A ARG+ YL + K IHRD+ A N+L+ + + DFGLA+ + H D TT
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
R V +APE L + ++DV+ FG+LL E+ T
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V Y + + G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 75
Query: 363 Y-GFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-- 417
Y G P + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGC---------LRDFLQRHRARLDASRLLLYSSQICKG 126
Query: 418 -----DPKIIHRDVKAANILLDDCCEAVVGDFGLAKL--LDHQDSHVTTAVRGTVGHIAP 470
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E LS S ++DV+ FG++L EL T
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 9/200 (4%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHR 357
+F LGKG FG VY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+LR+Y + L+ + G + L+ D A L Y HE+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER- 133
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 134 --KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 478 SSEKTDVFGFGILLLELITG 497
EK D++ G+L E + G
Sbjct: 189 HDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 9/200 (4%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHR 357
+F LGKG FG VY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+LR+Y + L+ + G + L+ D A L Y HE+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER- 133
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 134 --KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKT 188
Query: 478 SSEKTDVFGFGILLLELITG 497
EK D++ G+L E + G
Sbjct: 189 HDEKVDLWCAGVLCYEFLVG 208
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 9/200 (4%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGN--AIGGEIQFQTEVEMISLAVHR 357
+F LGKG FG VY Q+ ++A+K L G E Q + E+E+ S H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+LR+Y + L+ + G + L+ D A L Y HE+
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER- 134
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
K+IHRD+K N+L+ E + DFG + H S + GT+ ++ PE +
Sbjct: 135 --KVIHRDIKPENLLMGYKGELKIADFGWSV---HAPSLRRRXMCGTLDYLPPEMIEGKT 189
Query: 478 SSEKTDVFGFGILLLELITG 497
EK D++ G+L E + G
Sbjct: 190 HDEKVDLWCAGVLCYEFLVG 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V Y + + G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 76
Query: 363 Y-GFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-- 417
Y G P + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGC---------LRDFLQRHRARLDASRLLLYSSQICKG 127
Query: 418 -----DPKIIHRDVKAANILLDDCCEAVVGDFGLAKL--LDHQDSHVTTAVRGTVGHIAP 470
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E LS S ++DV+ FG++L EL T
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 28/206 (13%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LGKG FG V Y + + G +VAVK+L+ + FQ E++++ A+H + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGP-DQQRDFQREIQILK-ALHSDFIVK 88
Query: 363 Y-GFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-- 417
Y G P + LV Y+ +G + D+ R R L A+R LLY + C
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGC---------LRDFLQRHRARLDASRLLLYSSQICKG 139
Query: 418 -----DPKIIHRDVKAANILLDDCCEAVVGDFGLAKL--LDHQDSHVTTAVRGTVGHIAP 470
+ +HRD+ A NIL++ + DFGLAKL LD V + + AP
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E LS S ++DV+ FG++L EL T
Sbjct: 200 ESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 116/259 (44%), Gaps = 28/259 (10%)
Query: 263 RQRRNQQMFFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQ 322
++ RNQQ D++E + V N RF ++++ G+G F VYKG+
Sbjct: 1 QEERNQQQD-DIEELETKAVGXSNDGRFLKFDIEI-----------GRGSFKTVYKGLDT 48
Query: 323 DGTV-VAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGFCMTPTER----LLVY 376
+ TV VA L+D E Q F+ E E + H N++R Y + + +LV
Sbjct: 49 ETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108
Query: 377 PYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDC 436
++G++ + LK + + +GL +LH + P IIHRD+K NI +
Sbjct: 109 ELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGP 167
Query: 437 CEAV-VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
+V +GD GLA L + + AV GT APE + E DV+ FG LE
Sbjct: 168 TGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXA 223
Query: 496 TGQRALEYGKAANQKGAML 514
T EY + Q A +
Sbjct: 224 TS----EYPYSECQNAAQI 238
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 10/212 (4%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
++ NF +LGKG FG ++ + + G + AVK LK + + T E L+
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 355 VHRN---LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLL 411
+ RN L +L+ TP V +++ G + ++ D + + A L+
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAP 470
+LH D II+RD+K N+LLD + DFG+ K + + VTTA GT +IAP
Sbjct: 139 FLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAP 193
Query: 471 EYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
E L D + G+LL E++ G E
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 28/216 (12%)
Query: 306 NILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA--VHRNLLRL 362
I +G FG V+K ++ D V + L+D + +Q+E E+ S H NLL+
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQS------WQSEREIFSTPGMKHENLLQF 74
Query: 363 YGF----CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC- 417
E L+ + GS+ LKG I+ W+ +A +RGL YLHE
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGN-IITWNELCHVAETMSRGLSYLHEDVP 133
Query: 418 -------DPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIA 469
P I HRD K+ N+LL AV+ DFGLA + + T GT ++A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 470 PEYLSTGQSSE-----KTDVFGFGILLLELITGQRA 500
PE L + + + D++ G++L EL++ +A
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKA 229
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 23/204 (11%)
Query: 306 NILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+LG G FG VYKGI + DG VA+K L++ + + E +++ +
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVAS-------RLKGKPILDWSTRKRIALGAARGLLYL 413
RL G C+T T +L V M G + RL + +L+W + A+G+ YL
Sbjct: 83 RLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 414 HEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEY 472
D +++HRD+ A N+L+ + DFGLA+LLD ++ + + +A E
Sbjct: 136 E---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 473 LSTGQSSEKTDVFGFGILLLELIT 496
+ + + ++DV+ +G+ + EL+T
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA--VHRNLLRLY 363
+ +G FG V+K +L + V + ++D + +Q E E+ SL H N+L+
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQS------WQNEYEVYSLPGMKHENILQFI 84
Query: 364 GFCMTPT----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-- 417
G T + L+ + GS++ LK ++ W+ IA ARGL YLHE
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 418 -----DPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIAPE 471
P I HRD+K+ N+LL + A + DFGLA K + + T GT ++APE
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 472 YLSTGQSSE-----KTDVFGFGILLLELIT 496
L + + + D++ G++L EL +
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVE--M 350
++++ +F +LGKG FG V+ + A+K LK + + T VE +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 351 ISLAVHRNLLRLYGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+SLA L + FC T+ V Y++ G + ++ D S A
Sbjct: 72 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
GL +LH + I++RD+K NILLD + DFG+ K D+ T GT +I
Sbjct: 131 GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYI 186
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQ 498
APE L + + D + FG+LL E++ GQ
Sbjct: 187 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 137/318 (43%), Gaps = 57/318 (17%)
Query: 292 FRELQVATHNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGG 340
F+ L+ F KN+ LG+G FG V K T VAVK LK+ NA
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPS 68
Query: 341 EIQ-FQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---------- 389
E++ +E ++ H ++++LYG C LL+ Y GS+ L+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 390 ------GKPILDWSTRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANILLDD 435
LD + + +G ++G+ YL E K++HRD+ A NIL+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 436 CCEAVVGDFGLAKLLDHQDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 494
+ + DFGL++ + +DS+V + R V +A E L + ++DV+ FG+LL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 495 ITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCT 554
+T N I E+ +L D EEM ++ L C
Sbjct: 246 VT--------LGGNPYPG-------IPPERLFNLLKTGHRMERPDNCS-EEMYRLMLQCW 289
Query: 555 QYLPAHRPKMSEVVRMLE 572
+ P RP +++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 308 LGKGGFGIV---YKGILQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V DGT +VAVK LK+G +Q E+E++ H ++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
G C E+ LV Y+ GS+ L + + + A G+ YLH Q
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQ---H 131
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLD--HQDSHVTTAVRGTVGHIAPEYLSTGQS 478
IHR + A N+LLD+ +GDFGLAK + H+ V V APE L +
Sbjct: 132 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 191
Query: 479 SEKTDVFGFGILLLELIT 496
+DV+ FG+ L EL+T
Sbjct: 192 YYASDVWSFGVTLYELLT 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 306 NILGKGGFGIVYKGILQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+ LG G FG V G + G VAVK +++ + +G + + E++ + L H ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG---KIRREIQNLKLFRHPHI 78
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
++LY TP++ +V Y+S G + + LD +R+ G+ Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM-- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG-QS 478
++HRD+K N+LLD A + DFGL+ ++ D G+ + APE +S +
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 479 SEKTDVFGFGILLLELITG 497
+ D++ G++L L+ G
Sbjct: 194 GPEVDIWSSGVILYALLCG 212
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+GKG FG V G + G VAVK +K+ F E +++ H NL++L G +
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 368 TPTERL-LVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
L +V YM+ GS+ R +G+ +L + +L + YL +HR
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 126
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 484
D+ A N+L+ + A V DFGL K + S + V APE L + S K+DV
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
+ FGILL E+ + +G+ + + D V ++ + K++
Sbjct: 183 WSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 219
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 308 LGKGGFGIV---YKGILQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V DGT +VAVK LK+G +Q E+E++ H ++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
G C E+ LV Y+ GS+ L + + + A G+ YLH Q
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLP-RHCVGLAQLLLFAQQICEGMAYLHAQ---H 132
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLD--HQDSHVTTAVRGTVGHIAPEYLSTGQS 478
IHR + A N+LLD+ +GDFGLAK + H+ V V APE L +
Sbjct: 133 YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKF 192
Query: 479 SEKTDVFGFGILLLELIT 496
+DV+ FG+ L EL+T
Sbjct: 193 YYASDVWSFGVTLYELLT 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+GKG FG V G + G VAVK +K+ F E +++ H NL++L G +
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 368 TPTERL-LVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
L +V YM+ GS+ R +G+ +L + +L + YL +HR
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 313
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 484
D+ A N+L+ + A V DFGL K + S + V APE L + S K+DV
Sbjct: 314 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
+ FGILL E+ + +G+ + + D V ++ + K++
Sbjct: 370 WSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 406
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSXQEYSDWKEK 223
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+GKG FG V G + G VAVK +K+ F E +++ H NL++L G +
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 75
Query: 368 TPTERL-LVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
L +V YM+ GS+ R +G+ +L + +L + YL +HR
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 132
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 484
D+ A N+L+ + A V DFGL K + S + V APE L S K+DV
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
+ FGILL E+ + +G+ + + D V ++ + K++
Sbjct: 189 WSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 301 NFSSKNILGKGGFGIVY---KGILQD-GTVVAVKRLKDGN-AIGGEIQFQTEVEMISLAV 355
+F +LG+G FG V+ K D G + A+K LK + ++ + E ++++
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
H +++L+ T + L+ ++ G + +RL + + K A GL +LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHS 148
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAVRGTVGHIAPEYLS 474
II+RD+K NILLD+ + DFGL+K +DH+ + GTV ++APE ++
Sbjct: 149 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC--GTVEYMAPEVVN 203
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
S D + +G+L+ E++TG
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 20/223 (8%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+GKG FG V G + G VAVK +K+ F E +++ H NL++L G +
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 368 TPTERL-LVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
L +V YM+ GS+ R +G+ +L + +L + YL +HR
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHR 141
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDV 484
D+ A N+L+ + A V DFGL K + S + V APE L + S K+DV
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
+ FGILL E+ + +G+ + + D V ++ + K++
Sbjct: 198 WSFGILLWEIYS------FGRVPYPRIPLKDVVPRVEKGYKMD 234
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVE--M 350
++++ +F +LGKG FG V+ + A+K LK + + T VE +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 351 ISLAVHRNLLRLYGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+SLA L + FC T+ V Y++ G + ++ D S A
Sbjct: 71 LSLAWEHPFLT-HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIIL 129
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
GL +LH + I++RD+K NILLD + DFG+ K D+ T GT +I
Sbjct: 130 GLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYI 185
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQ 498
APE L + + D + FG+LL E++ GQ
Sbjct: 186 APEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 301 NFSSKNILGKGGFGIVYKG-ILQDGTVVAVKRL-KDGNAIGGEIQ-FQTEVEMISLAVHR 357
+F N+LGKG F VY+ + G VA+K + K G +Q Q EV++ H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHP 71
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKG--KPILDWSTRKRIALGAARGLLYLHE 415
++L LY + LV NG + LK KP + R + G+LYLH
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH-QIITGMLYLHS 130
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH-QDSHVTTAVRGTVGHIAPEYLS 474
I+HRD+ +N+LL + DFGLA L + H T GT +I+PE +
Sbjct: 131 H---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLC--GTPNYISPEIAT 185
Query: 475 TGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
++DV+ G + L+ G+ + N
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 299 THNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGEIQFQTE 347
H+ ++I LG+G FG V+ QD +VAVK LK+ + + FQ E
Sbjct: 12 VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQRE 70
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-----------GKPI--- 393
E++++ H++++R +G C L+V+ YM +G + L+ G+ +
Sbjct: 71 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 394 -LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
L +A A G++YL +HRD+ N L+ +GDFG+++ +
Sbjct: 131 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
Query: 453 QDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKG 511
D + V + + PE + + + ++DV+ FG++L E+ T YGK +
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQL 241
Query: 512 AMLDWVKKIHQEKKLE 527
+ + + I Q ++LE
Sbjct: 242 SNTEAIDCITQGRELE 257
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 136/318 (42%), Gaps = 57/318 (17%)
Query: 292 FRELQVATHNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGG 340
F+ L+ F KN+ LG+G FG V K T VAVK LK+ NA
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPS 68
Query: 341 EIQ-FQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---------- 389
E++ +E ++ H ++++LYG C LL+ Y GS+ L+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 390 ------GKPILDWSTRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANILLDD 435
LD + + +G ++G+ YL E K++HRD+ A NIL+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAE 185
Query: 436 CCEAVVGDFGLAKLLDHQDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 494
+ + DFGL++ + +DS V + R V +A E L + ++DV+ FG+LL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 495 ITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCT 554
+T N I E+ +L D EEM ++ L C
Sbjct: 246 VT--------LGGNPYPG-------IPPERLFNLLKTGHRMERPDNCS-EEMYRLMLQCW 289
Query: 555 QYLPAHRPKMSEVVRMLE 572
+ P RP +++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 299 THNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGEIQFQTE 347
H+ ++I LG+G FG V+ QD +VAVK LK+ + + FQ E
Sbjct: 6 VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQRE 64
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-----------GKPI--- 393
E++++ H++++R +G C L+V+ YM +G + L+ G+ +
Sbjct: 65 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 394 -LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
L +A A G++YL +HRD+ N L+ +GDFG+++ +
Sbjct: 125 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
Query: 453 QDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKG 511
D + V + + PE + + + ++DV+ FG++L E+ T YGK +
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQL 235
Query: 512 AMLDWVKKIHQEKKLE 527
+ + + I Q ++LE
Sbjct: 236 SNTEAIDCITQGRELE 251
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 37/256 (14%)
Query: 299 THNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGEIQFQTE 347
H+ ++I LG+G FG V+ QD +VAVK LK+ + + FQ E
Sbjct: 35 VHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQ-DFQRE 93
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-----------GKPI--- 393
E++++ H++++R +G C L+V+ YM +G + L+ G+ +
Sbjct: 94 AELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 394 -LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
L +A A G++YL +HRD+ N L+ +GDFG+++ +
Sbjct: 154 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 453 QDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKG 511
D + V + + PE + + + ++DV+ FG++L E+ T YGK +
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT------YGKQPWYQL 264
Query: 512 AMLDWVKKIHQEKKLE 527
+ + + I Q ++LE
Sbjct: 265 SNTEAIDCITQGRELE 280
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 129/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKG----ILQDGTV--VAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + D + VAVK L + + E+ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 139
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMA--- 191
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
QD + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 192 --QDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 249 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 293
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 294 AIILERIE 301
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + ++ H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 15/203 (7%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
F K LG G F +V G + AVK + G E + E+ ++ H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPIL---DWSTRKRIALGAARGLLYLHEQC 417
L +P LV +S G + R+ K D ST R L A + YLH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA---VYYLHRMG 140
Query: 418 DPKIIHRDVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
I+HRD+K N+L D+ + ++ DFGL+K+ D V + GT G++APE L+
Sbjct: 141 ---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD--VMSTACGTPGYVAPEVLA 195
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
S+ D + G++ L+ G
Sbjct: 196 QKPYSKAVDCWSIGVIAYILLCG 218
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 129
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 130 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 189
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 190 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 222
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 308 LGKGGFGIVYKGIL---QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
LG G FG V +G+ + VA+K LK G + E +++ + ++RL G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGK----PILDWSTRKRIALGAARGLLYLHEQCDPK 420
C +LV G + L GK P+ S + + G+ YL E+
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPV---SNVAELLHQVSMGMKYLEEK---N 130
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVT--TAVRGTVGHIAPEYLSTGQS 478
+HRD+ A N+LL + A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 479 SEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
S ++DV+ +G+ + E AL YG+ +K + + I Q K++E
Sbjct: 191 SSRSDVWSYGVTMWE------ALSYGQKPYKKMKGPEVMAFIEQGKRME 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 47/293 (16%)
Query: 305 KNILGKGGFGIVYKG-ILQDGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLL 360
++++G+G FG V K I +DG + A+KR+K+ + F E+E++ L H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILD--------------WSTRKRIALGA 406
L G C L Y +G++ L+ +L+ S+++ + A
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 407 --ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRG 463
ARG+ YL ++ + IHRD+ A NIL+ + A + DFGL++ Q+ +V T R
Sbjct: 140 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
V +A E L+ + +DV+ +G+LL E+++ G + +K+ Q
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 247
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV----RMLE 572
+LE ++ D +E+ + C + P RP ++++ RMLE
Sbjct: 248 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 290
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 34/301 (11%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKP-ILDWSTRKRIALGAA--RG 409
L H N++ L G C L++ Y G + + L+ K +L+ IA A R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 410 LLYLHEQ--------CDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTA 460
LL+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKI 520
R V +APE + + ++DV+ +GILL E+ + L+ I
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYPGI 270
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAERW 580
K LV + + + + C P HRP ++ L+ +R
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330
Query: 581 E 581
E
Sbjct: 331 E 331
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 131
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 132 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 192 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 224
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 129/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKG----ILQDGTV--VAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + D + VAVK L + + E+ F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 101 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 153
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 206
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 207 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 263 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 307
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 308 AIILERIE 315
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G +G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-------ETRPRPSQPSSLA 138
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 191
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 192 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 247
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 248 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 292
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 293 AIILERIE 300
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 129/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKG----ILQDGTV--VAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + D + VAVK L + + E+ F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 100
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-------ETRPRPSQPSSLA 153
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 206
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 207 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 263 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 307
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 308 AIILERIE 315
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 129/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKG----ILQDGTV--VAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + D + VAVK L + + E+ F E
Sbjct: 41 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEAL 100
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 101 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 153
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 154 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 206
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 207 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 262
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 263 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 307
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 308 AIILERIE 315
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 18 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 77
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 78 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 130
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+ +
Sbjct: 131 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDI 185
Query: 451 DHQDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ V + PE G + KTD + FG+LL E+ + + Y +NQ
Sbjct: 186 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQ 244
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ +L++V + M K+ RI M Q C Q+ P RP + ++
Sbjct: 245 E--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILE 289
Query: 570 MLE 572
+E
Sbjct: 290 RIE 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 138/293 (47%), Gaps = 47/293 (16%)
Query: 305 KNILGKGGFGIVYKG-ILQDGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLL 360
++++G+G FG V K I +DG + A+KR+K+ + F E+E++ L H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILD--------------WSTRKRIALGA 406
L G C L Y +G++ L+ +L+ S+++ + A
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 407 --ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRG 463
ARG+ YL ++ + IHRD+ A NIL+ + A + DFGL++ Q+ +V T R
Sbjct: 150 DVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
V +A E L+ + +DV+ +G+LL E+++ G + +K+ Q
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 257
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV----RMLE 572
+LE ++ D +E+ + C + P RP ++++ RMLE
Sbjct: 258 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 300
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 87 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 139
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 192
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 193 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 249 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 293
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 294 AIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 86 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 138
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 139 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 191
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 192 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 247
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 248 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 292
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 293 AIILERIE 300
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 132
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 133 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 188
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+A E + + ++DV+ +G+ + EL+T G A++ ++L+ +++ Q
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 27 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 86
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 87 IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 139
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 140 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 192
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 193 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 248
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 249 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 293
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 294 AIILERIE 301
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAK 129
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 130 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 185
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 17/228 (7%)
Query: 280 EEVSLGNLRRFQFREL------QVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRL 332
E V L N R Q ++L + F LG+G +G VYK I ++ G +VA+K++
Sbjct: 3 ETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV 62
Query: 333 KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVAS--RLKG 390
+ + I+ E+ ++ ++++ YG T+ +V Y GSV+ RL+
Sbjct: 63 PVESDLQEIIK---EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119
Query: 391 KPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL 450
K + + I +GL YLH + IHRD+KA NILL+ A + DFG+A L
Sbjct: 120 KTLTE-DEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175
Query: 451 DHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
+ + GT +APE + + D++ GI +E+ G+
Sbjct: 176 TDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 29/279 (10%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+A + ILG+G FG VY+G+ + VAVK K + + +F +E ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 353 LAVHRNLLRLYGFCMT-PTERLL-VYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H ++++L G PT ++ +YPY G R K L T +L + +
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAM 138
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
YL +HRD+ NIL+ +GDFGL++ ++ +D + + R + ++P
Sbjct: 139 AYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEML 529
E ++ + + +DV+ F + + E+++ G++ + + + G + +K + L
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRL 245
Query: 530 VDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
DL + + C Y P+ RP+ +E+V
Sbjct: 246 PKPDLCPPV-------LYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 101/239 (42%), Gaps = 38/239 (15%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
N ++G+G +G VYKG L D VAVK N + + + L H N+
Sbjct: 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR--QNFINEKNIYRVPLMEHDNIA 70
Query: 361 RLYGFCMTPT-----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH- 414
R T E LLV Y NGS+ L DW + R+A RGL YLH
Sbjct: 71 RFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHT 129
Query: 415 -----EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD--------HQDSHVTTAV 461
+ P I HRD+ + N+L+ + V+ DFGL+ L +D+ + V
Sbjct: 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV 189
Query: 462 RGTVGHIAPEYLSTG-------QSSEKTDVFGFGILLLE-------LITGQRALEYGKA 506
GT+ ++APE L + ++ D++ G++ E L G+ EY A
Sbjct: 190 -GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 36/303 (11%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK--PILDWS---TRKRIALGAA 407
L H N++ L G C L++ Y G + + L+ K P L++S + ++
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 408 RGLLYLHEQ--------CDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVT 458
R LL+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 459 TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVK 518
R V +APE + + ++DV+ +GILL E+ + L+
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYP 270
Query: 519 KIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAE 578
I K LV + + + + C P HRP ++ L+ +
Sbjct: 271 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 330
Query: 579 RWE 581
R E
Sbjct: 331 RRE 333
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 186
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 86 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 138
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 139 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 194
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 132 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 187
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 129
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 130 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 185
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 43 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 102
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 103 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 155
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 156 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 208
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 209 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 264
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 265 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 309
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 310 AIILERIE 317
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 29/279 (10%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+A + ILG+G FG VY+G+ + VAVK K + + +F +E ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 353 LAVHRNLLRLYGFCMT-PTERLL-VYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H ++++L G PT ++ +YPY G R K L T +L + +
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAM 122
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
YL +HRD+ NIL+ +GDFGL++ ++ +D + + R + ++P
Sbjct: 123 AYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEML 529
E ++ + + +DV+ F + + E+++ G++ + + + G + +K + L
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRL 229
Query: 530 VDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
DL + + C Y P+ RP+ +E+V
Sbjct: 230 PKPDLCPPV-------LYTLMTRCWDYDPSDRPRFTELV 261
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 33 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 92
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 93 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 145
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 146 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 198
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 199 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 254
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 255 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 299
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 300 AIILERIE 307
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 135/318 (42%), Gaps = 57/318 (17%)
Query: 292 FRELQVATHNFSSKNI-----LGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGG 340
F+ L+ F KN+ LG+G FG V K T VAVK LK+ NA
Sbjct: 10 FKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPS 68
Query: 341 EIQ-FQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK---------- 389
E++ +E ++ H ++++LYG C LL+ Y GS+ L+
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 390 ------GKPILDWSTRKRIALG--------AARGLLYLHEQCDPKIIHRDVKAANILLDD 435
LD + + +G ++G+ YL E ++HRD+ A NIL+ +
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAE 185
Query: 436 CCEAVVGDFGLAKLLDHQDSHVTTAV-RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLEL 494
+ + DFGL++ + +DS V + R V +A E L + ++DV+ FG+LL E+
Sbjct: 186 GRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 245
Query: 495 ITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCT 554
+T N I E+ +L D EEM ++ L C
Sbjct: 246 VT--------LGGNPYPG-------IPPERLFNLLKTGHRMERPDNCS-EEMYRLMLQCW 289
Query: 555 QYLPAHRPKMSEVVRMLE 572
+ P RP +++ + LE
Sbjct: 290 KQEPDKRPVFADISKDLE 307
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 132 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 187
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 132 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 187
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 126/279 (45%), Gaps = 29/279 (10%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGILQ----DGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+A + ILG+G FG VY+G+ + VAVK K + + +F +E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 353 LAVHRNLLRLYGFCMT-PTERLL-VYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H ++++L G PT ++ +YPY G R K L T +L + +
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAM 126
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
YL +HRD+ NIL+ +GDFGL++ ++ +D + + R + ++P
Sbjct: 127 AYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLDWVKKIHQEKKLEML 529
E ++ + + +DV+ F + + E+++ G++ + + + G + +K + L
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL----------EKGDRL 233
Query: 530 VDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
DL + + C Y P+ RP+ +E+V
Sbjct: 234 PKPDLCPPV-------LYTLMTRCWDYDPSDRPRFTELV 265
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 82 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 134
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 135 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 190
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 79 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 131
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 132 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 187
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 108/229 (47%), Gaps = 22/229 (9%)
Query: 308 LGKGGFGIVYKGIL---QDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
LG G FG V +G+ + VA+K LK G + E +++ + ++RL G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGK----PILDWSTRKRIALGAARGLLYLHEQCDPK 420
C +LV G + L GK P+ S + + G+ YL E+
Sbjct: 404 VCQA-EALMLVMEMAGGGPLHKFLVGKREEIPV---SNVAELLHQVSMGMKYLEEK---N 456
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVT--TAVRGTVGHIAPEYLSTGQS 478
+HR++ A N+LL + A + DFGL+K L DS+ T +A + + APE ++ +
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 479 SEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
S ++DV+ +G+ + E AL YG+ +K + + I Q K++E
Sbjct: 517 SSRSDVWSYGVTMWE------ALSYGQKPYKKMKGPEVMAFIEQGKRME 559
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 131 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 186
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 44 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 103
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 104 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 156
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+ +
Sbjct: 157 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDI 211
Query: 451 DHQDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ V + PE G + KTD + FG+LL E+ + + Y +NQ
Sbjct: 212 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQ 270
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ +L++V + M K+ RI M Q C Q+ P RP + ++
Sbjct: 271 E--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILE 315
Query: 570 MLE 572
+E
Sbjct: 316 RIE 318
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 125/303 (41%), Gaps = 54/303 (17%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 179
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+ +
Sbjct: 180 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMARDI 234
Query: 451 DHQDSHVTTAVRG-TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ V + PE G + KTD + FG+LL E+ + + Y +NQ
Sbjct: 235 YRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYPSKSNQ 293
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ +L++V + M K+ RI M Q C Q+ P RP + ++
Sbjct: 294 E--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNFAIILE 338
Query: 570 MLE 572
+E
Sbjct: 339 RIE 341
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 122/280 (43%), Gaps = 37/280 (13%)
Query: 301 NFSSKNILGKGGFGIVYKG-ILQDGTVVAVKR-----LKDGNAIGGEIQFQTEVEMISLA 354
NF + +G+G F VY+ L DG VA+K+ L D A I+ E++++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK---EIDLLKQL 89
Query: 355 VHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----GKPILDWSTRKRIALGAARGL 410
H N+++ Y + E +V G ++ +K K ++ T + + L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---H 467
++H + +++HRD+K AN+ + +GD GL + S TTA VG +
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTPYY 202
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
++PE + + K+D++ G LL E+ Q YG N + KKI Q
Sbjct: 203 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMN----LYSLCKKIEQCDYPP 257
Query: 528 MLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
+ D +Y EE+ Q+ +C P RP ++ V
Sbjct: 258 LPSD-----HYS----EELRQLVNMCINPDPEKRPDVTYV 288
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 136 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 191
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 70 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 122
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 123 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 178
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 127/308 (41%), Gaps = 64/308 (20%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+V N + LG G FG VY+G + VAVK L + + E+ F E
Sbjct: 53 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 112
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKR-------- 401
+IS H+N++R G + R ++ M+ G + S L+ TR R
Sbjct: 113 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-------ETRPRPSQPSSLA 165
Query: 402 ------IALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE-----AVVGDFGLAKLL 450
+A A G YL E IHRD+ A N LL C A +GDFG+A+
Sbjct: 166 MLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT--CPGPGRVAKIGDFGMAR-- 218
Query: 451 DHQDSHVTTAVRG------TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYG 504
D + + R V + PE G + KTD + FG+LL E+ + + Y
Sbjct: 219 ---DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS-LGYMPYP 274
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
+NQ+ +L++V + M K+ RI M Q C Q+ P RP
Sbjct: 275 SKSNQE--VLEFVTSGGR-----MDPPKNCPGPVYRI----MTQ----CWQHQPEDRPNF 319
Query: 565 SEVVRMLE 572
+ ++ +E
Sbjct: 320 AIILERIE 327
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 124/300 (41%), Gaps = 36/300 (12%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGL 410
L H N++ L G C L++ Y G + + R K + LD + + L R L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL---RDL 162
Query: 411 LYLHEQ--------CDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAV 461
L+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 163 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIH 521
R V +APE + + ++DV+ +GILL E+ + L+ I
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYPGIL 267
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAERWE 581
K LV + + + + C P HRP ++ L+ +R E
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE 327
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 36/298 (12%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVAS--RLKGKPILDWSTRKRIALGAARGL 410
L H N++ L G C L++ Y G + + R K + LD + + L R L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL---RDL 154
Query: 411 LYLHEQ--------CDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAV 461
L+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIH 521
R V +APE + + ++DV+ +GILL E+ + L+ I
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYPGIL 259
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAER 579
K LV + + + + C P HRP ++ L+ +R
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR 317
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 34/301 (11%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKP-ILDWSTRKRIALG--AARG 409
L H N++ L G C L++ Y G + + L+ K +L+ IA + R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 410 LLYLHEQ--------CDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTA 460
LL+ Q IHRDV A N+LL + A +GDFGLA+ +++ + V
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 225
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKI 520
R V +APE + + ++DV+ +GILL E+ + L+ I
Sbjct: 226 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS---------------LGLNPYPGI 270
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGLAERW 580
K LV + + + + C P HRP ++ L+ +R
Sbjct: 271 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330
Query: 581 E 581
E
Sbjct: 331 E 331
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 101 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 153
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 154 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 209
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F ++G GGFG V+K + DG ++R+K N + + EV+ ++ H N+
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-----KAEREVKALAKLDHVNI 67
Query: 360 LRLYGFCM--------TPTERLLVYPYM-SNGSVASRLKGKPIL------------DWST 398
+ Y C T + L Y N +SR K K + W
Sbjct: 68 VH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE 126
Query: 399 RKR-------IAL----GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA 447
++R +AL +G+ Y+H + K+IHRD+K +NI L D + +GDFGL
Sbjct: 127 KRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 448 KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
L ++ T +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 184 TSL--KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIG---GEIQFQTEVEM 350
+ + ++FS I+G+GGFG VY D G + A+K L D I GE E M
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL-DKKRIKMKQGETLALNERIM 241
Query: 351 ISLAVHRNLLRLYGFCM-----TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
+SL + + CM TP + + M+ G + L + + + A
Sbjct: 242 LSLVSTGDCP--FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 299
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
GL ++H + +++RD+K ANILLD+ + D GLA + H + GT
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 353
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGKAANQ 509
G++APE L G + + + D F G +L +L+ G K ++
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIG---GEIQFQTEVEM 350
+ + ++FS I+G+GGFG VY D G + A+K L D I GE E M
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL-DKKRIKMKQGETLALNERIM 242
Query: 351 ISLAVHRNLLRLYGFCM-----TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
+SL + + CM TP + + M+ G + L + + + A
Sbjct: 243 LSLVSTGDCP--FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
GL ++H + +++RD+K ANILLD+ + D GLA + H + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGKAANQ 509
G++APE L G + + + D F G +L +L+ G K ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIG---GEIQFQTEVEM 350
+ + ++FS I+G+GGFG VY D G + A+K L D I GE E M
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL-DKKRIKMKQGETLALNERIM 242
Query: 351 ISLAVHRNLLRLYGFCM-----TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
+SL + + CM TP + + M+ G + L + + + A
Sbjct: 243 LSLVSTGDCP--FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
GL ++H + +++RD+K ANILLD+ + D GLA + H + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGKAANQ 509
G++APE L G + + + D F G +L +L+ G K ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 19/225 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIG---GEIQFQTEVEM 350
+ + ++FS I+G+GGFG VY D G + A+K L D I GE E M
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL-DKKRIKMKQGETLALNERIM 242
Query: 351 ISLAVHRNLLRLYGFCM-----TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
+SL + + CM TP + + M+ G + L + + + A
Sbjct: 243 LSLVSTGDCP--FIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE 300
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
GL ++H + +++RD+K ANILLD+ + D GLA + H + GT
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTH 354
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGKAANQ 509
G++APE L G + + + D F G +L +L+ G K ++
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 110/244 (45%), Gaps = 37/244 (15%)
Query: 286 NLRRFQFR-ELQVATHNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAI 338
+ R +++ + + N +LG G FG V GI + G VAVK LK+
Sbjct: 30 DFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS 89
Query: 339 GGEIQFQTEVEMIS-LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK------ 391
+E++M++ L H N++ L G C L++ Y G + + L+ K
Sbjct: 90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSE 149
Query: 392 PILDWSTRKRI-----------------ALGAARGLLYLH-EQCDPKIIHRDVKAANILL 433
+++ +KR+ A A+G+ +L + C +HRD+ A N+L+
Sbjct: 150 DEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLV 205
Query: 434 DDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLL 492
+ DFGLA+ + ++V R V +APE L G + K+DV+ +GILL
Sbjct: 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265
Query: 493 ELIT 496
E+ +
Sbjct: 266 EIFS 269
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 47/293 (16%)
Query: 305 KNILGKGGFGIVYKG-ILQDGTVV--AVKRLKDGNAIGGEIQFQTEVEMI-SLAVHRNLL 360
++++G+G FG V K I +DG + A+KR+K+ + F E+E++ L H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILD--------------WSTRKRIALGA 406
L G C L Y +G++ L+ +L+ S+++ + A
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 407 --ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRG 463
ARG+ YL ++ + IHR++ A NIL+ + A + DFGL++ Q+ +V T R
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
V +A E L+ + +DV+ +G+LL E+++ G + +K+ Q
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS------LGGTPYCGMTCAELYEKLPQG 254
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV----RMLE 572
+LE ++ D +E+ + C + P RP ++++ RMLE
Sbjct: 255 YRLEKPLNCD----------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 297
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 39/212 (18%)
Query: 306 NILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV----H 356
+LG G FG V+KG+ + +G V +K ++D + G FQ + + LA+ H
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHM-LAIGSLDH 92
Query: 357 RNLLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--------- 406
+++RL G C P L LV Y+ GS +LD + R ALG
Sbjct: 93 AHIVRLLGLC--PGSSLQLVTQYLPLGS---------LLDHVRQHRGALGPQLLLNWGVQ 141
Query: 407 -ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVT-TAVRGT 464
A+G+ YL E ++HR++ A N+LL + V DFG+A LL D + + +
Sbjct: 142 IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 465 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+ +A E + G+ + ++DV+ +G+ + EL+T
Sbjct: 199 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 39/285 (13%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP---------ILDWSTRKRI---ALGAA 407
L G C P L+V + G++++ L+ K D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVG 466
+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKL 526
+APE + + ++DV+ FG+LL E+ + A+ G +D ++
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKID--------EEF 256
Query: 527 EMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ + + EM Q L C P+ RP SE+V L
Sbjct: 257 XRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 39/212 (18%)
Query: 306 NILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV----H 356
+LG G FG V+KG+ + +G V +K ++D + G FQ + + LA+ H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS---GRQSFQAVTDHM-LAIGSLDH 74
Query: 357 RNLLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--------- 406
+++RL G C P L LV Y+ GS +LD + R ALG
Sbjct: 75 AHIVRLLGLC--PGSSLQLVTQYLPLGS---------LLDHVRQHRGALGPQLLLNWGVQ 123
Query: 407 -ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVT-TAVRGT 464
A+G+ YL E ++HR++ A N+LL + V DFG+A LL D + + +
Sbjct: 124 IAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 465 VGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+ +A E + G+ + ++DV+ +G+ + EL+T
Sbjct: 181 IKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A
Sbjct: 73 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAE 125
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 126 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 181
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 8/215 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG+G G V + + VAVK + A+ + E+ + + H N+++ YG
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ L Y S G + R++ + +R G++YLH I HRD+
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDI 130
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
K N+LLD+ + DFGLA + + + + + GT+ ++APE L + +E DV
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 190
Query: 485 FGFGILLLELITGQRALEYGKAANQKGAMLDWVKK 519
+ GI+L ++ G+ L + + ++ DW +K
Sbjct: 191 WSCGIVLTAMLAGE--LPWDQPSDSCQEYSDWKEK 223
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 43/287 (14%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP---------ILDWSTRKRI---ALGAA 407
L G C P L+V + G++++ L+ K D+ T + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVG 466
+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKIHQEK 524
+APE + + ++DV+ FG+LL E+ + A+ G +D + +++ +
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKEGT 264
Query: 525 KLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
++ +Y EM Q L C P+ RP SE+V L
Sbjct: 265 RMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 302 FSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQ---TEVEMISLAVHR 357
FS +G G FG VY +++ VVA+K++ E ++Q EV + H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 114
Query: 358 NLLRLYGFCMTPTERLLVYPY-MSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N ++ G + LV Y + + S + KP+ + + GA +GL YLH
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSH 173
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY---L 473
+IHRDVKA NILL + +GDFG A ++ + V GT +APE +
Sbjct: 174 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 225
Query: 474 STGQSSEKTDVFGFGILLLEL 494
GQ K DV+ GI +EL
Sbjct: 226 DEGQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 18/201 (8%)
Query: 302 FSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQ---TEVEMISLAVHR 357
FS +G G FG VY +++ VVA+K++ E ++Q EV + H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNE-KWQDIIKEVRFLQKLRHP 75
Query: 358 NLLRLYGFCMTPTERLLVYPY-MSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N ++ G + LV Y + + S + KP+ + + GA +GL YLH
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA-VTHGALQGLAYLHSH 134
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY---L 473
+IHRDVKA NILL + +GDFG A ++ + V GT +APE +
Sbjct: 135 ---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAM 186
Query: 474 STGQSSEKTDVFGFGILLLEL 494
GQ K DV+ GI +EL
Sbjct: 187 DEGQYDGKVDVWSLGITCIEL 207
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 47/301 (15%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI 351
+E + ++GKG FG VY G + + ++ N + F+ EV
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLK-AFKREVMAY 83
Query: 352 SLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-GKPILDWSTRKRIALGAARGL 410
H N++ G CM+P ++ ++ S ++ K +LD + ++IA +G+
Sbjct: 84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-------- 462
YLH + I+H+D+K+ N+ D+ + V+ DFGL + S V A R
Sbjct: 144 GYLHAKG---ILHKDLKSKNVFYDN-GKVVITDFGLFSI-----SGVLQAGRREDKLRIQ 194
Query: 463 -GTVGHIAPEY---LSTGQSSEK------TDVFGFGILLLELITGQRALEYGKAANQKGA 512
G + H+APE LS +K +DVF G + EL
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL-----------------H 237
Query: 513 MLDWVKKIHQEKKLEMLVDKDLKNNYDRIEL-EEMVQVALLCTQYLPAHRPKMSEVVRML 571
+W K + + + +K N +I + +E+ + L C + RP ++++ ML
Sbjct: 238 AREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
Query: 572 E 572
E
Sbjct: 298 E 298
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEMISLAV 355
F +LG+G FG V+ G+ + A+K LK + ++ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
H +++L+ T + L+ ++ G + +RL + + K A L +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAVRGTVGHIAPEYLS 474
II+RD+K NILLD+ + DFGL+K +DH+ + GTV ++APE ++
Sbjct: 145 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 199
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
++ D + FG+L+ E++TG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY FC E+L Y NG + ++ D + + L YLH +
Sbjct: 98 FFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 157 ---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 214 KSACKSSDLWALGCIIYQLVAG 235
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 126/290 (43%), Gaps = 46/290 (15%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 361 RLYGFCMTPTERLLV---YPYMSNGSVASRLKGKPILDWSTRKRI-------------AL 404
L G C P L+V + N S R K + + T + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 405 GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRG 463
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKIH 521
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLK 265
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 266 EGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 28/240 (11%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
+ H + +GKG +G V++G Q G VAVK + E + E E+ + +
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVM 58
Query: 356 --HRNLLRLYGFCMTP----TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
H N+L MT T+ L+ Y GS+ L+ LD + RI L A G
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASG 117
Query: 410 LLYLH-----EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT 464
L +LH Q P I HRD+K+ NIL+ + + D GLA + + +
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 465 VG---HIAPEYLSTG------QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
VG ++APE L S ++ D++ FG++L E+ +R + G + K D
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD 235
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 308 LGKGGFGIV---YKGILQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V DGT +VAVK LK ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--------ARGLLY 412
G C E+ LV Y+ GS+ D+ R I L G+ Y
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR---------DYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD--HQDSHVTTAVRGTVGHIAP 470
LH Q IHR++ A N+LLD+ +GDFGLAK + H+ V V AP
Sbjct: 133 LHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E L + +DV+ FG+ L EL+T
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 111 GPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
G IP EIG + L L+L +N +G IP +G LR L + ++N L G P +++++T
Sbjct: 643 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 702
Query: 171 LIFLDLSYNNLSGPVPRFSA-KTF---NIVGNPLICA 203
L +DLS NNLSGP+P +TF + NP +C
Sbjct: 703 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 739
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 111 GPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
G IP+ + T L + LSNN TGEIP +G L +L ++ +NNS SG P L
Sbjct: 477 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 536
Query: 171 LIFLDLSYNNLSGPVP 186
LI+LDL+ N +G +P
Sbjct: 537 LIWLDLNTNLFNGTIP 552
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%)
Query: 70 SPESLVIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQTLDLS 129
+P++ + L + + +G + P++ G IP+ +G L+KL+ L L
Sbjct: 388 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 447
Query: 130 NNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGPVPRFS 189
N GEIP L ++++L+ + + N L+G P+ L++ T L ++ LS N L+G +P++
Sbjct: 448 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Query: 190 AKTFNIV 196
+ N+
Sbjct: 508 GRLENLA 514
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 65 TMVTCSPESLVIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQ 124
T+ CS ++ L + LSGT+ S+G G IP E+ + L+
Sbjct: 410 TLSNCSE---LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 466
Query: 125 TLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGP 184
TL L N TGEIPS L + +L ++ +NN L+G P + + L L LS N+ SG
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 526
Query: 185 VP 186
+P
Sbjct: 527 IP 528
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 115 AEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFL 174
++ R L+ LD+S+N F+ IP LG +LQ++ + N LSG F ++++ T+L L
Sbjct: 191 VDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 249
Query: 175 DLSYNNLSGPVPRFSAKTFNIVGNPLICATGSEPD 209
++S N GP+P K+ + TG PD
Sbjct: 250 NISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 75 VIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAE-IGRLTKLQTLDLSNNFF 133
+ GL + + G + P G G +P + + ++ L+ LDLS N F
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 134 TGEIPSSLGHL---------------------------RSLQYMRFNNNSLSGAFPTSLA 166
+GE+P SL +L +LQ + NN +G P +L+
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 167 SMTQLIFLDLSYNNLSGPVP 186
+ ++L+ L LS+N LSG +P
Sbjct: 413 NCSELVSLHLSFNYLSGTIP 432
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 GPIPAEI-GRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPT-SLASM 168
G IP + G L LDLS N F G +P G L+ + ++N+ SG P +L M
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 169 TQLIFLDLSYNNLSGPVPR 187
L LDLS+N SG +P
Sbjct: 340 RGLKVLDLSFNEFSGELPE 358
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 78 LGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQTLDLSNNFFTGEI 137
L I LSG S +I GPIP L LQ L L+ N FTGEI
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 282
Query: 138 PSSL-GHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGPVP 186
P L G +L + + N GA P S + L L LS NN SG +P
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 116 EIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLD 175
++ RL+ ++++ + G + + S+ ++ + N LSG P + SM L L+
Sbjct: 600 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 659
Query: 176 LSYNNLSGPVP 186
L +N++SG +P
Sbjct: 660 LGHNDISGSIP 670
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 132
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 133 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 188
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNLLRLYGF 365
+G GGF V + G +VA+K + D N +G ++ + +TE+E + H+++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
T + +V Y G + + + L + + + Y+H Q HRD
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRD 133
Query: 426 VKAANILLDDCCEAVVGDFGL-AKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS--SEKT 482
+K N+L D+ + + DFGL AK ++D H+ T G++ + APE L G+S +
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAYAAPE-LIQGKSYLGSEA 191
Query: 483 DVFGFGILLLELITG 497
DV+ GILL L+ G
Sbjct: 192 DVWSMGILLYVLMCG 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEMISLAV 355
F +LG+G FG V+ G+ + A+K LK + ++ + E +++
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
H +++L+ T + L+ ++ G + +RL + + K A L +LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAVRGTVGHIAPEYLS 474
II+RD+K NILLD+ + DFGL+K +DH+ + GTV ++APE ++
Sbjct: 146 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 200
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
++ D + FG+L+ E++TG
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 115/236 (48%), Gaps = 25/236 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+ L++ + + E +++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 110 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 162
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 163 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 218
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
+A E + + ++DV+ +G+ + EL+T G A++ ++L+ +++ Q
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 274
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGT----VVAVKRLKDGN-AIGGEIQFQTEVEMISLAV 355
F +LG+G FG V+ G+ + A+K LK + ++ + E +++
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
H +++L+ T + L+ ++ G + +RL + + K A L +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAVRGTVGHIAPEYLS 474
II+RD+K NILLD+ + DFGL+K +DH+ + GTV ++APE ++
Sbjct: 145 LG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC--GTVEYMAPEVVN 199
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
++ D + FG+L+ E++TG
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 131 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 186
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 93/206 (45%), Gaps = 29/206 (14%)
Query: 308 LGKGGFGIV---YKGILQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V DGT +VAVK LK ++ E++++ H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--------ARGLLY 412
G C E+ LV Y+ GS+ D+ R I L G+ Y
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLR---------DYLPRHSIGLAQLLLFAQQICEGMAY 132
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD--HQDSHVTTAVRGTVGHIAP 470
LH Q IHR++ A N+LLD+ +GDFGLAK + H+ V V AP
Sbjct: 133 LHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E L + +DV+ FG+ L EL+T
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +L G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 136 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 191
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +L G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 111 GPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
G IP EIG + L L+L +N +G IP +G LR L + ++N L G P +++++T
Sbjct: 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705
Query: 171 LIFLDLSYNNLSGPVPRFSA-KTF---NIVGNPLICA 203
L +DLS NNLSGP+P +TF + NP +C
Sbjct: 706 LTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%)
Query: 111 GPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
G IP+ + T L + LSNN TGEIP +G L +L ++ +NNS SG P L
Sbjct: 480 GEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRS 539
Query: 171 LIFLDLSYNNLSGPVP 186
LI+LDL+ N +G +P
Sbjct: 540 LIWLDLNTNLFNGTIP 555
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%)
Query: 70 SPESLVIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQTLDLS 129
+P++ + L + + +G + P++ G IP+ +G L+KL+ L L
Sbjct: 391 NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLW 450
Query: 130 NNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGPVPRFS 189
N GEIP L ++++L+ + + N L+G P+ L++ T L ++ LS N L+G +P++
Sbjct: 451 LNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Query: 190 AKTFNIV 196
+ N+
Sbjct: 511 GRLENLA 517
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 65 TMVTCSPESLVIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQ 124
T+ CS ++ L + LSGT+ S+G G IP E+ + L+
Sbjct: 413 TLSNCSE---LVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLE 469
Query: 125 TLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGP 184
TL L N TGEIPS L + +L ++ +NN L+G P + + L L LS N+ SG
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGN 529
Query: 185 VP 186
+P
Sbjct: 530 IP 531
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 115 AEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFL 174
++ R L+ LD+S+N F+ IP LG +LQ++ + N LSG F ++++ T+L L
Sbjct: 194 VDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 252
Query: 175 DLSYNNLSGPVPRFSAKTFNIVGNPLICATGSEPD 209
++S N GP+P K+ + TG PD
Sbjct: 253 NISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPD 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 28/140 (20%)
Query: 75 VIGLGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAE-IGRLTKLQTLDLSNNFF 133
+ GL + + G + P G G +P + + ++ L+ LDLS N F
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 134 TGEIPSSLGHL---------------------------RSLQYMRFNNNSLSGAFPTSLA 166
+GE+P SL +L +LQ + NN +G P +L+
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 167 SMTQLIFLDLSYNNLSGPVP 186
+ ++L+ L LS+N LSG +P
Sbjct: 416 NCSELVSLHLSFNYLSGTIP 435
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 111 GPIPAEI-GRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPT-SLASM 168
G IP + G L LDLS N F G +P G L+ + ++N+ SG P +L M
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 169 TQLIFLDLSYNNLSGPVPR 187
L LDLS+N SG +P
Sbjct: 343 RGLKVLDLSFNEFSGELPE 361
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 78 LGIPSQNLSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQTLDLSNNFFTGEI 137
L I LSG S +I GPIP L LQ L L+ N FTGEI
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEI 285
Query: 138 PSSL-GHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLDLSYNNLSGPVP 186
P L G +L + + N GA P S + L L LS NN SG +P
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 116 EIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQLIFLD 175
++ RL+ ++++ + G + + S+ ++ + N LSG P + SM L L+
Sbjct: 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILN 662
Query: 176 LSYNNLSGPVP 186
L +N++SG +P
Sbjct: 663 LGHNDISGSIP 673
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVK----------RLKDGNAIGGEIQFQTEVEMISLAVHR 357
LG GG VY L + T++ +K R K+ +F+ EV S H+
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLK----RFEREVHNSSQLSHQ 71
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N++ + LV Y+ +++ ++ L T G+ + H
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH--- 128
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
D +I+HRD+K NIL+D + DFG+AK L T V GTV + +PE
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 478 SSEKTDVFGFGILLLELITGQ 498
+ E TD++ GI+L E++ G+
Sbjct: 189 TDECTDIYSIGIVLYEMLVGE 209
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L++ M G + ++ + +L+W + A+
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 131 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 186
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 302 FSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ K LG GGFG V + I QD G VA+K+ + + ++ E++++ H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 361 RLYGFC-----MTPTE-RLLVYPYMSNGSVASRL---------KGKPILDWSTRKRIALG 405
+ P + LL Y G + L K PI + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI------RTLLSD 130
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVG---DFGLAKLLDHQDSHVTTAVR 462
+ L YLHE +IIHRD+K NI+L + ++ D G AK LD + T
Sbjct: 131 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFV 185
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 501
GT+ ++APE L + + D + FG L E ITG R
Sbjct: 186 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 96/219 (43%), Gaps = 30/219 (13%)
Query: 302 FSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ K LG GGFG V + I QD G VA+K+ + + ++ E++++ H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 361 RLYGFC-----MTPTE-RLLVYPYMSNGSVASRL---------KGKPILDWSTRKRIALG 405
+ P + LL Y G + L K PI + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI------RTLLSD 129
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVG---DFGLAKLLDHQDSHVTTAVR 462
+ L YLHE +IIHRD+K NI+L + ++ D G AK LD + T
Sbjct: 130 ISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ--GELCTEFV 184
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 501
GT+ ++APE L + + D + FG L E ITG R
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 302 FSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHR 357
F ++ LG+G IVY KG + + +K+ D + +TE+ ++ H
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIV------RTEIGVLLRLSHP 108
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLL----YL 413
N+++L TPTE LV ++ G + R+ K +R A A + +L YL
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS----ERDAADAVKQILEAVAYL 164
Query: 414 HEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
HE I+HRD+K N+L + DFGL+K+++HQ + V GT G+ AP
Sbjct: 165 HEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLMKTVCGTPGYCAP 219
Query: 471 EYLSTGQSSEKTDVFGFGILLLELITG 497
E L + D++ GI+ L+ G
Sbjct: 220 EILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 302 FSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN 358
F ++G G +G VYKG ++ G + A+K + + G E + + E+ M+ + HRN
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGDEEEEIKQEINMLKKYSHHRN 82
Query: 359 LLRLYGFCMTPT------ERLLVYPYMSNGSVASRLKGKP--ILDWSTRKRIALGAARGL 410
+ YG + + LV + GSV +K L I RGL
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
+LH+ K+IHRD+K N+LL + E + DFG++ LD T + GT +AP
Sbjct: 143 SHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAP 198
Query: 471 EYLSTGQSSE-----KTDVFGFGILLLELITGQRAL 501
E ++ ++ + K+D++ GI +E+ G L
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 34/224 (15%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F LG+GGFG+V++ + D A+KR++ N + EV+ ++ H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 360 LRLYGFCM--TPTERLL-----VYPYMS-----NGSVASRLKGKPILDWSTRK---RIAL 404
+R + + TE+L VY Y+ ++ + G+ ++ R I L
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFL 125
Query: 405 GAARGLLYLHEQCDPKIIHRDVKAANIL--LDDCCEAVVGDFGLAKLLDHQDSHVT---- 458
A + +LH + ++HRD+K +NI +DD + VGDFGL +D + T
Sbjct: 126 QIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK--VGDFGLVTAMDQDEEEQTVLTP 180
Query: 459 -------TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
T GT +++PE + S K D+F G++L EL+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 111/229 (48%), Gaps = 18/229 (7%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEVE 349
++ +F + LG G G+V+K + +V ++L I EI Q E++
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIRELQ 75
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
++ ++ YG + E + +M GS+ LK + ++++ +G
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 135
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHI 468
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT ++
Sbjct: 136 LTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYM 189
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+PE L S ++D++ G+ L+E+ G+ + G + +LD++
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI 238
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 76 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 128
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 129 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 184
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +L G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFGLAKLL + ++ H + +
Sbjct: 136 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG-KVPIK 191
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI--- 351
+AT + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 352 SLAVHRNLLRLYGFCMTP-TER----LLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALG 405
H N++RL C T T+R LV+ ++ K P L T K +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ +Q + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TL 175
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+ APE L + D++ G + E+ + A+Q G + D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI--- 351
+AT + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 352 SLAVHRNLLRLYGFCMTP-TER----LLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALG 405
H N++RL C T T+R LV+ ++ K P L T K +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ +Q + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TL 175
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+ APE L + D++ G + E+ + A+Q G + D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 78 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 130
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 131 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 186
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 284 LGNLRRFQFRELQVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEI 342
LG + ++++ + + +++LG G F ++ + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 343 QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI 402
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDDCCEAVVGDFGLAKLLDHQDSHVTT 459
+ YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--GSVLS 176
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F ++G GGFG V+K + DG +KR+K N + + EV+ ++ H N+
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-----KAEREVKALAKLDHVNI 66
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPIL------------DWSTRKR------ 401
+ Y C + Y ++ +SR K K + W ++R
Sbjct: 67 VH-YNGCWDGFD----YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 402 -IAL----GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
+AL +G+ Y+H + K+I+RD+K +NI L D + +GDFGL L +
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 457 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
+ +GT+ +++PE +S+ ++ D++ G++L EL+
Sbjct: 179 XRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 105/228 (46%), Gaps = 28/228 (12%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+GKG +G V++G L G VAVK +D + E TE+ L H N+L
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE----TEIYNTVLLRHDNILGFIAS 70
Query: 366 CMTP----TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH-----EQ 416
MT T+ L+ Y +GS+ L+ + L+ R+A+ AA GL +LH Q
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQ-RQTLEPHLALRLAVSAACGLAHLHVEIFGTQ 129
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAPEYL 473
P I HRD K+ N+L+ + + D GLA + ++ VG ++APE L
Sbjct: 130 GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVL 189
Query: 474 STG------QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+S + TD++ FG++L E+ +R + G + + D
Sbjct: 190 DEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNGIVEDYRPPFYD 235
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDG----TVVAVKRLKDGNAIGGEIQFQTEVEMISLAV 355
F +LG G FG VYKG+ + +G VA+K L++ + + E +++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-------GKPILDWSTRKRIALGAAR 408
+ ++ RL G C+T T +L+ M G + ++ + +L+W + A+
Sbjct: 83 NPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAK 135
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVG 466
G+ YL D +++HRD+ A N+L+ + DFG AKLL + ++ H + +
Sbjct: 136 GMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGG-KVPIK 191
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+A E + + ++DV+ +G+ + EL+T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVE 349
+V ++ + LG G FG V G Q G VAVK +++ + +G + + E++
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG---KIKREIQ 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ L H ++++LY TPT+ +V Y+S G + + ++ +R+
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+ Y H ++HRD+K N+LLD A + DFGL+ ++ D G+ + A
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRTSCGSPNYAA 178
Query: 470 PEYLSTG-QSSEKTDVFGFGILLLELITG 497
PE +S + + D++ G++L L+ G
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 31/228 (13%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDG--NAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
LGKG +GIV+K I + G VVAVK++ D N+ + F+ + + L+ H N++ L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 365 FCMTPTER--LLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+R LV+ YM A + IL+ ++ + + + YLH ++
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHA--VIRANILEPVHKQYVVYQLIKVIKYLHSGG---LL 131
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDH--------------------QDSHVTTAVR 462
HRD+K +NILL+ C V DFGL++ + D + T
Sbjct: 132 HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYV 191
Query: 463 GTVGHIAPEY-LSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQ 509
T + APE L + + ++ D++ G +L E++ G+ NQ
Sbjct: 192 ATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 284 LGNLRRFQFRELQVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEI 342
LG + ++++ + + +++LG G F ++ + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 343 QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI 402
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDDCCEAVVGDFGLAKLLDHQDSHVTT 459
+ YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLS 176
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 307 ILGKGGFGIVYK---GILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 362
+LGKG FG V K I Q AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE--YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ + +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 423 HRDVKAANILLDDC---CEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
HRD+K NILL+ C+ + DFGL+ Q++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 480 EKTDVFGFGILLLELITGQRALEYGK 505
EK DV+ G++L L++G YGK
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF-YGK 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 45/289 (15%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-----------ILDWSTRKRI---ALG 405
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGT 464
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 465 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKIHQ 522
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRLKE 266
Query: 523 EKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
++ +Y EM Q L C P+ RP SE+V L
Sbjct: 267 GTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 100/218 (45%), Gaps = 9/218 (4%)
Query: 284 LGNLRRFQFRELQVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEI 342
LG + ++++ + + +++LG G F ++ + +VA+K + G E
Sbjct: 2 LGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG 61
Query: 343 QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI 402
+ E+ ++ H N++ L + L+ +S G + R+ K R+
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANIL---LDDCCEAVVGDFGLAKLLDHQDSHVTT 459
+ YLH D I+HRD+K N+L LD+ + ++ DFGL+K+ D V +
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLS 176
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT G++APE L+ S+ D + G++ L+ G
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 361 RLYGFCMTPTERLLVY-PYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 256 KEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 266
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 267 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 308 LGKGGFGIVY---KGILQDGT--VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V DGT +VAVK LK ++ E++++ H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 363 YGFC--MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA--------ARGLLY 412
G C LV Y+ GS + D+ R I L G+ Y
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGS---------LRDYLPRHSIGLAQLLLFAQQICEGMAY 149
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD--HQDSHVTTAVRGTVGHIAP 470
LH Q IHRD+ A N+LLD+ +GDFGLAK + H+ V V AP
Sbjct: 150 LHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
Query: 471 EYLSTGQSSEKTDVFGFGILLLELIT 496
E L + +DV+ FG+ L EL+T
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 361 RLYGFCMTPTERLLVY-PYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 256 KEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 26/214 (12%)
Query: 308 LGKGGFGIVYKGIL----QDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 362
+G+G FG K IL +DG +K + E + + EV +++ H N+++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKP--------ILDWSTRKRIALGAARGLLYLH 414
+V Y G + R+ + ILDW + +AL ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK------HVH 142
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
D KI+HRD+K+ NI L +GDFG+A++L+ + A GT +++PE
Sbjct: 143 ---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICE 198
Query: 475 TGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
+ K+D++ G +L EL T + A E G N
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN 232
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+ +++LG G F ++ + +VA+K + G E + E+ ++ H N++
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
L + L+ +S G + R+ K R+ + YLH D
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLG 136
Query: 421 IIHRDVKAANIL---LDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
I+HRD+K N+L LD+ + ++ DFGL+K+ D V + GT G++APE L+
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED--PGSVLSTACGTPGYVAPEVLAQKP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
S+ D + G++ L+ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 15/209 (7%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVK-----RLKDGNAIGGEIQFQTEVE 349
+V ++ + LG G FG V G Q G VAVK +++ + +G + + E++
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG---KIKREIQ 63
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
+ L H ++++LY TPT+ +V Y+S G + + ++ +R+
Sbjct: 64 NLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA 123
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+ Y H ++HRD+K N+LLD A + DFGL+ ++ D G+ + A
Sbjct: 124 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM--SDGEFLRDSCGSPNYAA 178
Query: 470 PEYLSTG-QSSEKTDVFGFGILLLELITG 497
PE +S + + D++ G++L L+ G
Sbjct: 179 PEVISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG +G V++G Q G VAVK + E + E E+ + + H N+L
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 70
Query: 366 CMTP----TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH-----EQ 416
MT T+ L+ Y GS+ L+ LD + RI L A GL +LH Q
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAPEYL 473
P I HRD+K+ NIL+ + + D GLA + + + VG ++APE L
Sbjct: 130 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 189
Query: 474 STG------QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
S ++ D++ FG++L E+ +R + G + K D
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD 235
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 28/228 (12%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG +G V++G Q G VAVK + E + E E+ + + H N+L
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIAS 99
Query: 366 CMTP----TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH-----EQ 416
MT T+ L+ Y GS+ L+ LD + RI L A GL +LH Q
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 158
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAPEYL 473
P I HRD+K+ NIL+ + + D GLA + + + VG ++APE L
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVL 218
Query: 474 STG------QSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
S ++ D++ FG++L E+ +R + G + K D
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYD 264
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 131/291 (45%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V R
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 301
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 302 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 101/232 (43%), Gaps = 16/232 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGG-EIQFQTEVEMI--- 351
+AT + +G G +G VYK G VA+K ++ N G I EV ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 352 SLAVHRNLLRLYGFCMTP-TER----LLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALG 405
H N++RL C T T+R LV+ ++ K P L T K +
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
RGL +LH C I+HRD+K NIL+ + DFGLA++ +Q + V T+
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TL 175
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+ APE L + D++ G + E+ + A+Q G + D +
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V Y + G VAVK LK + + E+E++ H N+++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C L+ ++ +GS+ L K K ++ + + A+ +G+ YL +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 145
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ +HRD+ A N+L++ + +GDFGL K + D + V V APE L +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 478 SSEKTDVFGFGILLLELIT 496
+DV+ FG+ L EL+T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 308 LGKGGFGIV----YKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G FG V Y + G VAVK LK + + E+E++ H N+++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 363 YGFCMTPTER--LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G C L+ ++ +GS+ L K K ++ + + A+ +G+ YL +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR--- 133
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ +HRD+ A N+L++ + +GDFGL K + D + V V APE L +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 478 SSEKTDVFGFGILLLELIT 496
+DV+ FG+ L EL+T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+S+ +D++ G ++ +L+ G
Sbjct: 209 KSASKSSDLWALGCIIYQLVAG 230
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 307 ILGKGGFGIVYK---GILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 362
+LGKG FG V K I Q AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE--YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ + +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 423 HRDVKAANILLDDC---CEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
HRD+K NILL+ C+ + DFGL+ Q++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 480 EKTDVFGFGILLLELITGQRALEYGK 505
EK DV+ G++L L++G YGK
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF-YGK 225
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 361 RLYGFCMTPTERLLVY-PYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 256 KEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 307 ILGKGGFGIVYK---GILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRL 362
+LGKG FG V K I Q AVK + +A + EVE++ H N+++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQE--YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ + +V + G + + + RI G+ Y+H+ I+
Sbjct: 87 FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIV 143
Query: 423 HRDVKAANILLDDC---CEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
HRD+K NILL+ C+ + DFGL+ Q++ + + GT +IAPE L G
Sbjct: 144 HRDLKPENILLESKEKDCDIKIIDFGLSTCF-QQNTKMKDRI-GTAYYIAPEVLR-GTYD 200
Query: 480 EKTDVFGFGILLLELITGQRALEYGK 505
EK DV+ G++L L++G YGK
Sbjct: 201 EKCDVWSAGVILYILLSGTPPF-YGK 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG VYK ++ +V+A ++ D + + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 368 TPTERLLVYPYMSNGSV-ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
++ + + G+V A L+ + L S + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 427 KAANILLDDCCEAVVGDFGLA----KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 480
KA NIL + + DFG++ + + +DS + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 481 ---KTDVFGFGILLLEL 494
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 18/197 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG VYK ++ +V+A ++ D + + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 368 TPTERLLVYPYMSNGSV-ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
++ + + G+V A L+ + L S + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 427 KAANILLDDCCEAVVGDFGLA----KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 480
KA NIL + + DFG++ + + +DS + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 481 ---KTDVFGFGILLLEL 494
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + A GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 255
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 256 KEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGKP-------------ILDWSTRKRI---A 403
L G C P L+V + G++++ L+ K D+ T + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VR 462
A+G+ +L + K IHRD+ A NILL + + DFGLA+ + V R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKKI 520
+ +APE + + ++DV+ FG+LL E+ + A+ G +D + +++
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRRL 264
Query: 521 HQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 265 KEGTRMR-------APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F +LG+G FG V K D A+K+++ I +EV +++ H+ +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVMLLASLNHQYV 64
Query: 360 LRLYG-------FC--MTPTER----LLVYPYMSNGSVASRLKGKPILDWSTRK-RIALG 405
+R Y F MT ++ + Y NG++ + + + R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK---------LLDHQD-- 454
L Y+H Q IIHRD+K NI +D+ +GDFGLAK LD Q+
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 455 ---SHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 495
++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 182 GSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 19/235 (8%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGG----EIQFQTEVEMI 351
+AT + +G G +G VYK G VA+K ++ N GG I EV ++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 352 ---SLAVHRNLLRLYGFCMTP-TER----LLVYPYMSNGSVASRLKGKPI-LDWSTRKRI 402
H N++RL C T T+R LV+ ++ K P L T K +
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 125
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
RGL +LH C I+HRD+K NIL+ + DFGLA++ +Q T V
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ--MALTPVV 180
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
T+ + APE L + D++ G + E+ + A+Q G + D +
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGIL--QDGTVV--AVKRLKDGNAIGGEIQ-FQ 345
+ ++ + F+ +LGKG FG V + L +DG+ V AVK LK +I+ F
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFL 73
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTER------LLVYPYMSNGSV-----ASRLKGKPI- 393
E + H ++ +L G + + +++ P+M +G + ASR+ P
Sbjct: 74 REAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFN 133
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
L T R + A G+ YL + IHRD+ A N +L + V DFGL++ +
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 454 DSHVT-TAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
D + A + V +A E L+ + +DV+ FG+ + E++T
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEV 348
+++ +F + LG G G+V+K + +V ++L I EI Q E+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIREL 55
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+++ ++ YG + E + +M GS+ LK + ++++ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGH 467
GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 116 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 169
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 501
++PE L S ++D++ G+ L+E+ G+ +
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEV 348
+++ +F + LG G G+V+K + +V ++L I EI Q E+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIREL 55
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+++ ++ YG + E + +M GS+ LK + ++++ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGH 467
GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 116 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 169
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEV 348
+++ +F + LG G G+V+K + +V ++L I EI Q E+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIREL 55
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+++ ++ YG + E + +M GS+ LK + ++++ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGH 467
GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 116 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 169
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQRAL 501
++PE L S ++D++ G+ L+E+ G+ +
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEV 348
+++ +F + LG G G+V+K + +V ++L I EI Q E+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIREL 55
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+++ ++ YG + E + +M GS+ LK + ++++ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGH 467
GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 116 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 169
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 18/211 (8%)
Query: 295 LQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEV 348
+++ +F + LG G G+V+K + +V ++L I EI Q E+
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIREL 55
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+++ ++ YG + E + +M GS+ LK + ++++ +
Sbjct: 56 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIK 115
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGH 467
GL YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + + GT +
Sbjct: 116 GLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSY 169
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
++PE L S ++D++ G+ L+E+ G+
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + + GT +++PE L+
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 206 KSACKSSDLWALGCIIYQLVAG 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 71 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 130 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 187 KSACKSSDLWALGCIIYQLVAG 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 34/243 (13%)
Query: 263 RQRRNQQMFFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQ 322
+QR+ + F K++ +G L+ F ++ + LG G G+V+K +
Sbjct: 47 QQRKRLEAFLTQKQK------VGELKDDDFEKI----------SELGAGNGGVVFKVSHK 90
Query: 323 DGTVVAVKRLKDGNAIGGEI------QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVY 376
+V ++L I EI Q E++++ ++ YG + E +
Sbjct: 91 PSGLVMARKL-----IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 145
Query: 377 PYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDC 436
+M GS+ LK + ++++ +GL YL E+ KI+HRDVK +NIL++
Sbjct: 146 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSR 203
Query: 437 CEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
E + DFG++ +L+D + + GT +++PE L S ++D++ G+ L+E+
Sbjct: 204 GEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 259
Query: 496 TGQ 498
G+
Sbjct: 260 VGR 262
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQD--GT--VVAVKRLKDGNAIGGEIQFQTEVEMI 351
+V +F+ +LGKG FG K +L D GT + A+K LK I + T VE
Sbjct: 15 RVKLTDFNFLMVLGKGSFG---KVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 352 SLAVHRN---LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAA 407
LA+ L +L+ C +RL V Y++ G + ++ A +
Sbjct: 72 VLALLDKPPFLTQLHS-CFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTT-AVRGTVG 466
GL +LH++ II+RD+K N++LD + DFG+ K +H VTT GT
Sbjct: 131 IGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPD 185
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE 502
+IAPE ++ + D + +G+LL E++ GQ +
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 114/243 (46%), Gaps = 29/243 (11%)
Query: 308 LGKGGFGIVYKGILQD-GTVVAVKR--LKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
LG GG G+V+ + D VA+K+ L D ++ ++ E+++I H N+++++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR---EIKIIRRLDHDNIVKVFE 75
Query: 365 FCMTPTERL--------------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
+L +V YM +A+ L+ P+L+ R RGL
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHAR-LFMYQLLRGL 133
Query: 411 LYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG--H 467
Y+H ++HRD+K AN+ ++ + +GDFGLA+++D SH G V +
Sbjct: 134 KYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 468 IAPEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKL 526
+P L S ++ D++ G + E++TG+ Q +L+ + +H+E +
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQ 250
Query: 527 EML 529
E+L
Sbjct: 251 ELL 253
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 70 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 129 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 186 KSACKSSDLWALGCIIYQLVAG 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + + GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAG 231
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 36/217 (16%)
Query: 308 LGKGGFGIV--YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
LG+GGF V +G L DG A+KR+ E + Q E +M L H N+LRL +
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDRE-EAQREADMHRLFNHPNILRLVAY 94
Query: 366 CM----TPTERLLVYPYMSNGSV---ASRLKGKPILDWSTRKRIA---LGAARGLLYLHE 415
C+ E L+ P+ G++ RLK K ++ T +I LG RGL +H
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG--NFLTEDQILWLLLGICRGLEAIHA 152
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-----------KLLDHQDSHVTTAVRGT 464
+ HRD+K NILL D + V+ D G + L QD A R T
Sbjct: 153 K---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD---WAAQRCT 206
Query: 465 VGHIAPEYLSTGQS---SEKTDVFGFGILLLELITGQ 498
+ + APE S E+TDV+ G +L ++ G+
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 69 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 128 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 185 KSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 68 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 127 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 184 KSACKSSDLWALGCIIYQLVAG 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 104/232 (44%), Gaps = 17/232 (7%)
Query: 298 ATHNFSSKNILGKGGFGIVYKG--ILQDGTVVAVKRLKDGNAIGG----EIQFQTEVEMI 351
A + +G+G +G V+K + G VA+KR++ G I+ + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 352 SLAVHRNLLRLYGFC-MTPTER----LLVYPYMSNGSVASRLK-GKPILDWSTRKRIALG 405
H N++RL+ C ++ T+R LV+ ++ K +P + T K +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
RGL +LH +++HRD+K NIL+ + + DFGLA++ Q T+V T+
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTL 183
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+ APE L + D++ G + E+ + +Q G +LD +
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 128/284 (45%), Gaps = 33/284 (11%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 63 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT- 464
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ + +DS A +G
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYM--EDSTXXKASKGKL 174
Query: 465 -VGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQE 523
+ +APE ++ + + +DV+ FG+ + E+ L +G Q D + +I
Sbjct: 175 PIKWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENG 228
Query: 524 KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
++L M + + + C Y P+ RP+ +E+
Sbjct: 229 ERLPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 90 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 149 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 206 KSACKSSDLWALGCIIYQLVAG 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 18/197 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG VYK ++ +V+A ++ D + + E+++++ H N+++L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 368 TPTERLLVYPYMSNGSV-ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
++ + + G+V A L+ + L S + + L YLH D KIIHRD+
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 427 KAANILLDDCCEAVVGDFGLA----KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE-- 480
KA NIL + + DFG++ + + +D + GT +APE + S +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-----GTPYWMAPEVVMCETSKDRP 216
Query: 481 ---KTDVFGFGILLLEL 494
K DV+ GI L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 75 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 134 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 191 KSACKSSDLWALGCIIYQLVAG 212
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 51/312 (16%)
Query: 300 HNFSSKNILGKGGFGIVYK----GILQDGTV--VAVKRLKDGNAIGGEIQFQTEVEMIS- 352
+N LG G FG V + G+ ++ V VAVK LK + +E++++S
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK----------------------- 389
L H N++ L G C L++ Y G + + L+
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 390 -GKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
G+P L+ + A+G+ +L + IHRDV A N+LL + A +GDFGLA+
Sbjct: 151 DGRP-LELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 449 -LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAA 507
+++ + V R V +APE + + ++DV+ +GILL E+ +
Sbjct: 207 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----------- 255
Query: 508 NQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L+ I K LV + + + + C P HRP ++
Sbjct: 256 ----LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311
Query: 568 VRMLEGDGLAER 579
L+ +R
Sbjct: 312 CSFLQEQAQEDR 323
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 116/241 (48%), Gaps = 22/241 (9%)
Query: 265 RRNQQMFFDVKERHHEEVSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDG 324
++ +++ D ++R E L ++ ++ +F + LG G G+V+K +
Sbjct: 2 KKLEELELDEQQRKRLEAFLTQKQKVG----ELKDDDFEKISELGAGNGGVVFKVSHKPS 57
Query: 325 TVVAVKRLKDGNAIGGEI------QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPY 378
+V ++L I EI Q E++++ ++ YG + E + +
Sbjct: 58 GLVMARKL-----IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112
Query: 379 MSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCE 438
M GS+ LK + ++++ +GL YL E+ KI+HRDVK +NIL++ E
Sbjct: 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGE 170
Query: 439 AVVGDFGLA-KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ DFG++ +L+D + + GT +++PE L S ++D++ G+ L+E+ G
Sbjct: 171 IKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Query: 498 Q 498
+
Sbjct: 227 R 227
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 94 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 153 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 210 KSACKSSDLWALGCIIYQLVAG 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 96 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 155 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 212 KSACKSSDLWALGCIIYQLVAG 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 63 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 230
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 231 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 63 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 121
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLD--DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ DC + +GDFGL++ ++ + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSATDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 230
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 231 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 17/232 (7%)
Query: 298 ATHNFSSKNILGKGGFGIVYKG--ILQDGTVVAVKRLKDGNAIGG----EIQFQTEVEMI 351
A + +G+G +G V+K + G VA+KR++ G I+ + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 352 SLAVHRNLLRLYGFCMT-----PTERLLVYPYMSNGSVASRLK-GKPILDWSTRKRIALG 405
H N++RL+ C T+ LV+ ++ K +P + T K +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
RGL +LH +++HRD+K NIL+ + + DFGLA++ Q T+V T+
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTL 183
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+ APE L + D++ G + E+ + +Q G +LD +
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 91 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 149
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 150 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 258
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 259 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 109/229 (47%), Gaps = 22/229 (9%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEVE 349
++ +F + LG G G+V+K + +V ++L I EI Q E++
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKL-----IHLEIKPAIRNQIIRELQ 59
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
++ ++ YG + E + +M GS+ LK + ++++ +G
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKG 119
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLA-KLLDHQDSHVTTAVRGTVGHI 468
L YL E+ KI+HRDVK +NIL++ E + DFG++ +L+D + GT ++
Sbjct: 120 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV----GTRSYM 173
Query: 469 APEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
+PE L S ++D++ G+ L+E+ G+ Y + +LD++
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGR----YPRPPMAIFELLDYI 218
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 101/235 (42%), Gaps = 23/235 (9%)
Query: 298 ATHNFSSKNILGKGGFGIVYKG--ILQDGTVVAVKRLKDGNAIGG-------EIQFQTEV 348
A + +G+G +G V+K + G VA+KR++ G E+ +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 349 EMISLAVHRNLLRLYGFCMTP-----TERLLVYPYMSNGSVASRLK-GKPILDWSTRKRI 402
E H N++RL+ C T+ LV+ ++ K +P + T K +
Sbjct: 69 ETFE---HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
RGL +LH +++HRD+K NIL+ + + DFGLA++ Q T+V
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVV 180
Query: 463 GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWV 517
T+ + APE L + D++ G + E+ + +Q G +LD +
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVI 235
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 103/233 (44%), Gaps = 36/233 (15%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAI----------------- 338
V + ++ K+ +GKG +G+V + D T A+K L I
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 339 -GGEIQFQTEVEMISLAV-------HRNLLRLYGFCMTPTER--LLVYPYMSNGSVASRL 388
GG IQ + +E + + H N+++L P E +V+ ++ G V
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 389 KGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
KP+ + R +G+ YLH Q KIIHRD+K +N+L+ + + DFG++
Sbjct: 130 TLKPLSEDQARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
Query: 449 LLDHQDSHVTTAVRGTVGHIAPEYLSTGQ---SSEKTDVFGFGILLLELITGQ 498
D+ ++ V GT +APE LS + S + DV+ G+ L + GQ
Sbjct: 186 EFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F +V L A+K L+ + I ++ + T E +++S H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 93 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 152 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 209 KSACKSSDLWALGCIIYQLVAG 230
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 89/194 (45%), Gaps = 8/194 (4%)
Query: 308 LGKGGFGIVYKGI--LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
LG+G + VYKG L D +VA+K ++ + G EV ++ H N++ L+
Sbjct: 10 LGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
T LV+ Y+ I++ K RGL Y H Q K++HRD
Sbjct: 69 IHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRD 125
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQSSEKTDV 484
+K N+L+++ E + DFGLA+ V T+ + P+ L + S + D+
Sbjct: 126 LKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV-VTLWYRPPDILLGSTDYSTQIDM 184
Query: 485 FGFGILLLELITGQ 498
+G G + E+ TG+
Sbjct: 185 WGVGCIFYEMATGR 198
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 63 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 121
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 230
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 231 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-GKPILDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ K LD ++ A +
Sbjct: 68 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 126
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 127 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 235
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 236 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 13/196 (6%)
Query: 307 ILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG G F V+ K L G + A+K +K A + E+ ++ H N++ L
Sbjct: 16 VLGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDS-SLENEIAVLKKIKHENIVTLED 73
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
+ T LV +S G + R+ + + + + YLHE I+HR
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHR 130
Query: 425 DVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
D+K N+L ++ + ++ DFGL+K+ Q+ ++TA GT G++APE L+ S+
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTAC-GTPGYVAPEVLAQKPYSKA 187
Query: 482 TDVFGFGILLLELITG 497
D + G++ L+ G
Sbjct: 188 VDCWSIGVITYILLCG 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLK-GKPILDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ K LD ++ A +
Sbjct: 66 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 124
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 125 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 233
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 234 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 65 LTMRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLS 123
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 124 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 232
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 233 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR----- 361
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+GF +V S+ K + L + G YLH ++
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 482 TDVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-Y 538
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPT 257
Query: 539 DRIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLP 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR----- 361
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 81
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+GF +V S+ K + L + G YLH ++
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 482 TDVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-Y 538
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPT 257
Query: 539 DRIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 258 ARPTINELLNDEFFTSGYIPARLP 281
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 137/315 (43%), Gaps = 28/315 (8%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLA 354
+ + + ++G+G +G+V K +D G +VA+K+ D + + +I + E++++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR-EIKLLKQL 81
Query: 355 VHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAARGLLYL 413
H NL+ L C LV+ ++ + ++ L+ P LD+ ++ G+ +
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 414 HEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL 473
H IIHRD+K NIL+ + DFG A+ L V T + APE L
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTL-AAPGEVYDDEVATRWYRAPELL 196
Query: 474 -STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKI---HQE------ 523
+ + DV+ G L+ E+ G+ +Q ++ + + HQE
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 524 -----KKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR--MLEGDGL 576
+ E+ + L+ Y ++ E ++ +A C P RP +E++ + DG
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 577 AERWEASQRAEATKS 591
AER+ + + K
Sbjct: 316 AERFSQELQLKVQKD 330
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G +G+VYK G +VA+KR++ D G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ LV+ +M + K L S K RG+ + H+ +I+HRD+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDL 145
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 485
K N+L++ + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIW 204
Query: 486 GFGILLLELITGQ 498
G + E+ITG+
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 296 QVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI------QFQTEVE 349
++ +F + LG G G+V K + ++ ++L I EI Q E++
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKL-----IHLEIKPAIRNQIIRELQ 66
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARG 409
++ ++ YG + E + +M GS+ LK + ++++ RG
Sbjct: 67 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L YL E+ +I+HRDVK +NIL++ E + DFG++ L DS + V GT ++A
Sbjct: 127 LAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQL--IDSMANSFV-GTRSYMA 181
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITGQ 498
PE L S ++D++ G+ L+EL G+
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 6/193 (3%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G +G+VYK G +VA+KR++ D G E+ ++ H N++ L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ LV+ +M + K L S K RG+ + H+ +I+HRD+
Sbjct: 89 HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDL 145
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 485
K N+L++ + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 146 KPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYSTSVDIW 204
Query: 486 GFGILLLELITGQ 498
G + E+ITG+
Sbjct: 205 SIGCIFAEMITGK 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR----- 361
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 105
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+GF +V S+ K + L + G YLH ++
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 482 TDVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-Y 538
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPT 281
Query: 539 DRIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 282 ARPTINELLNDEFFTSGYIPARLP 305
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 280 EEVSLGNLRRFQFRELQVATHN-FSSKNILGKGGFGIVYK-GILQDGTVVAVKRLKDGNA 337
+ + ++++ E Q T N F +LGKGGFG V + G + A K+L+
Sbjct: 163 DSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 338 IG--GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILD 395
GE E +++ R ++ L T LV M+ G + +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI------- 275
Query: 396 WSTRKRIALGAARGLLYLHEQC-------DPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
+ AR + Y E C +I++RD+K NILLDD + D GLA
Sbjct: 276 -YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA- 333
Query: 449 LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
+ + GTVG++APE + + + D + G LL E+I GQ + K
Sbjct: 334 -VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
Query: 509 QKGAMLDWVKKIHQE 523
++ + VK++ +E
Sbjct: 393 KREEVERLVKEVPEE 407
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR----- 361
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 85
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+GF +V S+ K + L + G YLH ++
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 482 TDVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-Y 538
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPT 261
Query: 539 DRIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 262 ARPTINELLNDEFFTSGYIPARLP 285
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F +LG+G FG V K D A+K+++ I +EV +++ H+ +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVMLLASLNHQYV 64
Query: 360 LRLYG-------FC--MTPTER----LLVYPYMSNGSVASRLKGKPILDWSTRK-RIALG 405
+R Y F MT ++ + Y N ++ + + + R+
Sbjct: 65 VRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ 124
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK---------LLDHQD-- 454
L Y+H Q IIHRD+K NI +D+ +GDFGLAK LD Q+
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 455 ---SHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 495
++T+A+ GT ++A E L TG +EK D++ GI+ E+I
Sbjct: 182 GSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 301 NFSSKNILGKGGFGI-VYKGILQDGTVVAVKRLKDGNAIG-GEIQFQT-EVEMISLAVHR 357
+F ILG+G F V L A+K L+ + I ++ + T E +++S H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 358 NLLRLYGFCMTPTERLLV-YPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
++LY F E+L Y NG + ++ D + + L YLH +
Sbjct: 91 FFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV-TTAVRGTVGHIAPEYLST 475
IIHRD+K NILL++ + DFG AK+L + GT +++PE L+
Sbjct: 150 G---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ + +D++ G ++ +L+ G
Sbjct: 207 KSACKSSDLWALGCIIYQLVAG 228
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR----- 361
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVG 103
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+GF +V S+ K + L + G YLH ++
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 482 TDVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-Y 538
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPT 279
Query: 539 DRIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 280 ARPTINELLNDEFFTSGYIPARLP 303
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 280 EEVSLGNLRRFQFRELQVATHN-FSSKNILGKGGFGIVYK-GILQDGTVVAVKRLKDGNA 337
+ + ++++ E Q T N F +LGKGGFG V + G + A K+L+
Sbjct: 163 DSIYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI 222
Query: 338 IG--GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILD 395
GE E +++ R ++ L T LV M+ G + +
Sbjct: 223 KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHI------- 275
Query: 396 WSTRKRIALGAARGLLYLHEQC-------DPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
+ AR + Y E C +I++RD+K NILLDD + D GLA
Sbjct: 276 -YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA- 333
Query: 449 LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAAN 508
+ + GTVG++APE + + + D + G LL E+I GQ + K
Sbjct: 334 -VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
Query: 509 QKGAMLDWVKKIHQE 523
++ + VK++ +E
Sbjct: 393 KREEVERLVKEVPEE 407
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 109/263 (41%), Gaps = 14/263 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR-----L 362
LGKGGF ++ D V ++ + + Q E + +++HR+L
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK--PHQREKMSMEISIHRSLAHQHVVGF 80
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+GF +V S+ K + L + G YLH ++I
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVI 137
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
HRD+K N+ L++ E +GDFGLA +++ D + GT +IAPE LS S +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEY-DGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 483 DVFGFGILLLELITGQRALEYG--KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNN-YD 539
DV+ G ++ L+ G+ E K + ++ H L+ K L+ +
Sbjct: 197 DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTA 256
Query: 540 RIELEEMVQVALLCTQYLPAHRP 562
R + E++ + Y+PA P
Sbjct: 257 RPTINELLNDEFFTSGYIPARLP 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL---- 359
LGKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 49 FLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 360 -LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ +GF +V S+ K + + + +G+ YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
++IHRD+K N+ L+D + +GDFGLA ++ D + GT +IAPE L
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 479 SEKTDVFGFGILLLELITGQRALE 502
S + D++ G +L L+ G+ E
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 14/200 (7%)
Query: 305 KNILGKGGFGIV-----YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+ LG+G FG V YK + ++L + + ++ + E+ + L H ++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDM--HMRVEREISYLKLLRHPHI 71
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
++LY TPT+ ++V Y + G + + K + +R + Y H
Sbjct: 72 IKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH--- 127
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG-QS 478
KI+HRD+K N+LLDD + DFGL+ ++ D + G+ + APE ++ +
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 479 SEKTDVFGFGILLLELITGQ 498
+ DV+ GI+L ++ G+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 58/341 (17%)
Query: 268 QQMFFDVKERHHEEVSLGNLRRFQFREL------QVATHNFSSKNILGKGGFGIV----- 316
Q+ ++V+ + EE++ N +L + + S LG G FG V
Sbjct: 1 QKPMYEVQWKVVEEINGNNXVXIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATA 60
Query: 317 YKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLYGFCMTPTERLL 374
Y I D + VAVK LK + +E++++S L H N++ L G C L+
Sbjct: 61 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 120
Query: 375 VYPYMSNGSVASRLKGK----------PIL--------DWSTRKRIALGAARGLLYLHEQ 416
+ Y G + + L+ K P + D + A+G+ +L +
Sbjct: 121 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 180
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVGHIAPEYLST 475
IHRD+ A NILL + DFGLA+ + + ++V R V +APE +
Sbjct: 181 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 237
Query: 476 GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ ++DV+ +GI L EL + + G + K K +K
Sbjct: 238 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-------------------FYKMIK 278
Query: 536 NNYDRIELE----EMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + E EM + C P RP ++V+++E
Sbjct: 279 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL---- 359
LGKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 49 FLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 360 -LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ +GF +V S+ K + + + +G+ YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
++IHRD+K N+ L+D + +GDFGLA ++ D + GT +IAPE L
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 479 SEKTDVFGFGILLLELITGQRALE 502
S + D++ G +L L+ G+ E
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 58/341 (17%)
Query: 268 QQMFFDVKERHHEEVSLGNLRRFQFREL------QVATHNFSSKNILGKGGFGIV----- 316
Q+ ++V+ + EE++ N +L + + S LG G FG V
Sbjct: 8 QKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATA 67
Query: 317 YKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLYGFCMTPTERLL 374
Y I D + VAVK LK + +E++++S L H N++ L G C L+
Sbjct: 68 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 127
Query: 375 VYPYMSNGSVASRLKGK----------PIL--------DWSTRKRIALGAARGLLYLHEQ 416
+ Y G + + L+ K P + D + A+G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVGHIAPEYLST 475
IHRD+ A NILL + DFGLA+ + + ++V R V +APE +
Sbjct: 188 ---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 476 GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ ++DV+ +GI L EL + + G + K K +K
Sbjct: 245 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-------------------FYKMIK 285
Query: 536 NNYDRIELE----EMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + E EM + C P RP ++V+++E
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 126/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 443 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ +DC + +GDFGL++ ++ + + + +
Sbjct: 502 TALAYLESK---RFVHRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 610
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 611 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 58/341 (17%)
Query: 268 QQMFFDVKERHHEEVSLGNLRRFQFREL------QVATHNFSSKNILGKGGFGIV----- 316
Q+ ++V+ + EE++ N +L + + S LG G FG V
Sbjct: 3 QKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATA 62
Query: 317 YKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLYGFCMTPTERLL 374
Y I D + VAVK LK + +E++++S L H N++ L G C L+
Sbjct: 63 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 122
Query: 375 VYPYMSNGSVASRLKGK----------PIL--------DWSTRKRIALGAARGLLYLHEQ 416
+ Y G + + L+ K P + D + A+G+ +L +
Sbjct: 123 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 182
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVGHIAPEYLST 475
IHRD+ A NILL + DFGLA+ + + ++V R V +APE +
Sbjct: 183 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 239
Query: 476 GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ ++DV+ +GI L EL + + G + K K +K
Sbjct: 240 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-------------------FYKMIK 280
Query: 536 NNYDRIELE----EMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + E EM + C P RP ++V+++E
Sbjct: 281 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 136/341 (39%), Gaps = 58/341 (17%)
Query: 268 QQMFFDVKERHHEEVSLGNLRRFQFREL------QVATHNFSSKNILGKGGFGIV----- 316
Q+ ++V+ + EE++ N +L + + S LG G FG V
Sbjct: 8 QKPMYEVQWKVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATA 67
Query: 317 YKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLLRLYGFCMTPTERLL 374
Y I D + VAVK LK + +E++++S L H N++ L G C L+
Sbjct: 68 YGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 127
Query: 375 VYPYMSNGSVASRLKGK----------PIL--------DWSTRKRIALGAARGLLYLHEQ 416
+ Y G + + L+ K P + D + A+G+ +L +
Sbjct: 128 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 187
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-VRGTVGHIAPEYLST 475
IHRD+ A NILL + DFGLA+ + + ++V R V +APE +
Sbjct: 188 ---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFN 244
Query: 476 GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLK 535
+ ++DV+ +GI L EL + + G + K K +K
Sbjct: 245 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-------------------FYKMIK 285
Query: 536 NNYDRIELE----EMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + E EM + C P RP ++V+++E
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 44/281 (15%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH-RNLLRLYG- 364
+G+G +G V K + + G ++AVKR++ + Q +++++ + +++ YG
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 365 --------FCM----TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
CM T ++ Y Y SV + + IL +I L + L +
Sbjct: 90 LFREGDCWICMELMSTSFDKFYKYVY----SVLDDVIPEEILG-----KITLATVKALNH 140
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
L E KIIHRD+K +NILLD + DFG++ L DS T G ++APE
Sbjct: 141 LKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL--VDSIAKTRDAGCRPYMAPER 196
Query: 473 LSTGQSSE----KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
+ S + ++DV+ GI L EL TG+ Y K W Q ++
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGR--FPYPK----------WNSVFDQLTQVVK 244
Query: 529 LVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
L N+ +R + LC + RPK E+++
Sbjct: 245 GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+LGKG +GIVY G L + +A+K + + ++ + E+ + H+N+++ G
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLG- 86
Query: 366 CMTPTERLLVYPYMSN---GSVASRLKGK--PILDWSTRKRIALGAAR---GLLYLHEQC 417
+ +E + +M GS+++ L+ K P+ D + I + GL YLH
Sbjct: 87 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILEGLKYLH--- 139
Query: 418 DPKIIHRDVKAANILLDDCCEAV-VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
D +I+HRD+K N+L++ + + DFG +K L + T GT+ ++APE + G
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 198
Query: 477 QS--SEKTDVFGFGILLLELITGQ 498
+ D++ G ++E+ TG+
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL---- 359
LGKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 33 FLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 87
Query: 360 -LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ +GF +V S+ K + + + +G+ YLH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 145
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
++IHRD+K N+ L+D + +GDFGLA ++ D + GT +IAPE L
Sbjct: 146 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 479 SEKTDVFGFGILLLELITGQRALE 502
S + D++ G +L L+ G+ E
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)
Query: 307 ILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNL---- 359
LGKGGF Y + T + K + G + + Q E +A+H++L
Sbjct: 49 FLGKGGFAKCY-----EITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPH 103
Query: 360 -LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ +GF +V S+ K + + + +G+ YLH
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNN-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
++IHRD+K N+ L+D + +GDFGLA ++ D + GT +IAPE L
Sbjct: 162 -RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 479 SEKTDVFGFGILLLELITGQRALE 502
S + D++ G +L L+ G+ E
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 122/267 (45%), Gaps = 29/267 (10%)
Query: 308 LGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
+G+G FG V++GI VA+K K+ + +F E + H ++++L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAARGLLYLHEQCDPKII 422
G +T ++ + G + S L+ + LD ++ A + L YL + + +
Sbjct: 75 GV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 130
Query: 423 HRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
HRD+ A N+L+ +DC + +GDFGL++ ++ + + + + +APE ++ + +
Sbjct: 131 HRDIAARNVLVSSNDCVK--LGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTS 188
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDR 540
+DV+ FG+ + E+ L +G Q D + +I ++L M +
Sbjct: 189 ASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP------- 235
Query: 541 IELEEMVQVALLCTQYLPAHRPKMSEV 567
+ + C Y P+ RP+ +E+
Sbjct: 236 ---PTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+GKG +G V+ G + G VAVK +TE+ L H N+L GF
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENIL---GFIA 98
Query: 368 TP-------TERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE----- 415
T+ L+ Y NGS+ LK LD + ++A + GL +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK--LLDHQDSHVTTAVR-GTVGHIAPEY 472
Q P I HRD+K+ NIL+ + D GLA + D + + R GT ++ PE
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEV 217
Query: 473 LSTG------QSSEKTDVFGFGILLLEL 494
L QS D++ FG++L E+
Sbjct: 218 LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 17/222 (7%)
Query: 308 LGKGGFGIVYKGILQDGT-VVAVKRLKDGNAIGGEIQFQTEVEMISLAV---HRNLLRLY 363
LG+G F I K + + AVK I ++ T+ E+ +L + H N+++L+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVK------IISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
LV ++ G + R+K K + I + ++H D ++H
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVH 129
Query: 424 RDVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
RD+K N+L +D E + DFG A+L + + T T+ + APE L+ E
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNGYDE 188
Query: 481 KTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQ 522
D++ G++L +++GQ + + + ++ +KKI +
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK 230
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+ + + + +LGKG FG V K Q+ V + + + E + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLK 81
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+++LY F LV + G + + + RI G+ Y
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IA
Sbjct: 142 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIA 196
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE L G EK DV+ G++L L++G
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 13/212 (6%)
Query: 296 QVATHNFSSKNILGKGGFGIVY---KGILQD-GTVVAVKRLKDGNAI-GGEIQFQTEVEM 350
+V NF +LG G +G V+ K D G + A+K LK + + T E
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTER 109
Query: 351 ISLAVHRN---LLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAA 407
L R L+ L+ T T+ L+ Y++ G + + L + + T + +
Sbjct: 110 QVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVG 166
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+L L II+RD+K NILLD V+ DFGL+K ++ GT+ +
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEY 226
Query: 468 IAPEYLSTGQS--SEKTDVFGFGILLLELITG 497
+AP+ + G S + D + G+L+ EL+TG
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 301 NFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
+F+ +LGKG FG V KG + + AVK LK I + T VE LA+
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDE---LYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 357 RN---LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
L +L+ C +RL V Y++ G + ++ A A GL +
Sbjct: 78 GKPPFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
L + II+RD+K N++LD + DFG+ K + D T GT +IAPE
Sbjct: 137 LQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEI 192
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
++ + D + FG+LL E++ GQ E
Sbjct: 193 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G +G+VYK G A+K+++ + G E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 485
K N+L++ E + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 486 GFGILLLELITG 497
G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G +G+VYK G A+K+++ + G E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 485
K N+L++ E + DFGLA+ T V T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 486 GFGILLLELITG 497
G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+ + + + +LGKG FG V K Q+ V + + + E EV+++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE-SLLREVQLLK 87
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+++LY F LV + G + + + RI G+ Y
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 147
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IA
Sbjct: 148 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIA 202
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE L G EK DV+ G++L L++G
Sbjct: 203 PEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 22/204 (10%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+LGKG +GIVY G L + +A+K + + ++ + E+ + H+N+++ G
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQ-PLHEEIALHKHLKHKNIVQYLG- 72
Query: 366 CMTPTERLLVYPYMSN---GSVASRLKGK--PILDWSTRKRIALGAAR---GLLYLHEQC 417
+ +E + +M GS+++ L+ K P+ D + I + GL YLH
Sbjct: 73 --SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILEGLKYLH--- 125
Query: 418 DPKIIHRDVKAANILLDDCCEAV-VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
D +I+HRD+K N+L++ + + DFG +K L + T GT+ ++APE + G
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETFTGTLQYMAPEIIDKG 184
Query: 477 QS--SEKTDVFGFGILLLELITGQ 498
+ D++ G ++E+ TG+
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 301 NFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
+F+ +LGKG FG V KG + + AVK LK I + T VE LA+
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDE---LYAVKILKKDVVIQDDDVECTMVEKRVLALP 398
Query: 357 RN---LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
L +L+ C +RL V Y++ G + ++ A A GL +
Sbjct: 399 GKPPFLTQLHS-CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
L + II+RD+K N++LD + DFG+ K + D T GT +IAPE
Sbjct: 458 LQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEI 513
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQRALE 502
++ + D + FG+LL E++ GQ E
Sbjct: 514 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 125/282 (44%), Gaps = 29/282 (10%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQD----GTVVAVKRLKDGNAIGGEIQFQTEV 348
R+ ++ +G+G FG V++GI VA+K K+ + +F E
Sbjct: 383 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 442
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPI-LDWSTRKRIALGAA 407
+ H ++++L G +T ++ + G + S L+ + LD ++ A +
Sbjct: 443 LTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS 501
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLD--DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
L YL + + +HRD+ A N+L+ DC + +GDFGL++ ++ + + + +
Sbjct: 502 TALAYLESK---RFVHRDIAARNVLVSATDCVK--LGDFGLSRYMEDSTYYKASKGKLPI 556
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKK 525
+APE ++ + + +DV+ FG+ + E+ L +G Q D + +I ++
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEI------LMHGVKPFQGVKNNDVIGRIENGER 610
Query: 526 LEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEV 567
L M + + + C Y P+ RP+ +E+
Sbjct: 611 LPMPPNCP----------PTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 10/195 (5%)
Query: 307 ILGK-GGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
I+G+ G FG VYK ++ +V+A ++ D + + E+++++ H N+++L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 75
Query: 366 CMTPTERLLVYPYMSNGSV-ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
++ + + G+V A L+ + L S + + L YLH D KIIHR
Sbjct: 76 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHR 132
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE---- 480
D+KA NIL + + DFG++ + GT +APE + S +
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 192
Query: 481 -KTDVFGFGILLLEL 494
K DV+ GI L+E+
Sbjct: 193 YKADVWSLGITLIEM 207
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 121/291 (41%), Gaps = 44/291 (15%)
Query: 308 LGKGGFGIV-----YKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMIS-LAVHRNLL 360
LG G FG V Y I D + VAVK LK + +E++++S L H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL---------------- 404
L G C L++ Y G + + L+ K ++ A+
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 405 --GAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
A+G+ +L + IHRD+ A NILL + DFGLA+ + + ++V
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIH 521
R V +APE + + ++DV+ +GI L EL + + G + K + K I
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----FYKMI- 261
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
++ ML + EM + C P RP ++V+++E
Sbjct: 262 -KEGFRMLSPEHAP--------AEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLY 363
ILG GG V+ L+D VAVK L+ A ++F+ E + + H ++ +Y
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 364 --GFCMTPTERL--LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G TP L +V Y+ ++ + + + + A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN--- 135
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQ 477
IIHRDVK ANIL+ V DFG+A+ + + V T AV GT +++PE
Sbjct: 136 GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS 195
Query: 478 SSEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 196 VDARSDVYSLGCVLYEVLTGE 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+ + + + +LGKG FG V K Q+ V + + + E + EV+++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLK 104
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+++LY F LV + G + + + RI G+ Y
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IA
Sbjct: 165 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIA 219
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE L G EK DV+ G++L L++G
Sbjct: 220 PEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G +G+VYK G A+K+++ + G E+ ++ H N+++LY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
T +LV+ ++ + L+ T K L G+ Y H D +++HRD+
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDL 126
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL-STGQSSEKTDVF 485
K N+L++ E + DFGLA+ T + T+ + AP+ L + + S D++
Sbjct: 127 KPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIW 185
Query: 486 GFGILLLELITG 497
G + E++ G
Sbjct: 186 SVGCIFAEMVNG 197
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 93/208 (44%), Gaps = 14/208 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+ + + + +LGKG FG V K Q+ V + + + E + EV+++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLK 105
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+++LY F LV + G + + + RI G+ Y
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
+H+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IA
Sbjct: 166 MHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKMKDKIGTAYYIA 220
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE L G EK DV+ G++L L++G
Sbjct: 221 PEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 301 NFSSKNILGKGGFGIV----YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV- 355
N+ K ILG+G +V +K ++ V + G+ E+Q E + + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 356 -----HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H N+++L T T LV+ M G + L K L ++I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
LH+ I+HRD+K NILLDD + DFG + LD + +V GT ++AP
Sbjct: 138 CALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LRSVCGTPSYLAP 192
Query: 471 EYLSTGQSS------EKTDVFGFGILLLELITG 497
E + + ++ D++ G+++ L+ G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 302 FSSKNILGKGGFGIVYK----GILQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLA 354
F +LGKGG+G V++ G + A+K LK + + E ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 355 VHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
H ++ L T + L+ Y+S G + +L+ + I T + L +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++APE L
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHTFCGTIEYMAPEILM 194
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
+ D + G L+ +++TG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLY 363
ILG GG V+ L+D VAVK L+ A ++F+ E + + H ++ +Y
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 364 --GFCMTPTERL--LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G TP L +V Y+ ++ + + + + A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN--- 135
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQ 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 136 GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 478 SSEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 196 VDARSDVYSLGCVLYEVLTGE 216
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 11/203 (5%)
Query: 302 FSSKNILGKGGFGIVYK----GILQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLA 354
F +LGKGG+G V++ G + A+K LK + + E ++
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 355 VHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
H ++ L T + L+ Y+S G + +L+ + I T + L +LH
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
++ II+RD+K NI+L+ + DFGL K H D VT GT+ ++APE L
Sbjct: 139 QKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH-DGTVTHXFCGTIEYMAPEILM 194
Query: 475 TGQSSEKTDVFGFGILLLELITG 497
+ D + G L+ +++TG
Sbjct: 195 RSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLY 363
ILG GG V+ L+D VAVK L+ A ++F+ E + + H ++ +Y
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 364 --GFCMTPTERL--LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
G TP L +V Y+ ++ + + + + A + L + H+
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG-- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQ 477
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 -IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS 195
Query: 478 SSEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 196 VDARSDVYSLGCVLYEVLTGE 216
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLA 354
V NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 355 VHRNLLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGL 410
H N+++L T + LV+ ++ AS L G P+ K +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGL 120
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
+ H +++HRD+K N+L++ + DFGLA+ T V T+ + AP
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAP 176
Query: 471 E-YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
E L S D++ G + E++T +RAL G +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 212
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+++ ++G G FG+VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 360 LRLYGFCMTPTER--------LLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGL 410
+RL F + E+ +L Y + VA + K L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 411 LYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
Y+H I HRD+K N+LLD D + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRA 190
Query: 470 PEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
PE + + DV+ G +L EL+ GQ +Q ++ + +E+ EM
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 THNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 356
+ N+ K LGKG F +V + + + G A K + + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N++RL+ + LV+ ++ G + + + + + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 417 CDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL 473
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 474 STGQSSEKTDVFGFGILLLELITG 497
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 127
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 THNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 356
+ N+ K LGKG F +V + + + G A K + + Q + E + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N++RL+ + LV+ ++ G + + + + + Y H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 417 CDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL 473
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 125 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 474 STGQSSEKTDVFGFGILLLELITG 497
S+ D++ G++L L+ G
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVG 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 THNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 356
+ N+ K LGKG F +V + + + G A K + + Q + E + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N++RL+ + LV+ ++ G + + + + + Y H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 417 CDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL 473
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 124 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 474 STGQSSEKTDVFGFGILLLELITG 497
S+ D++ G++L L+ G
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVG 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 19/214 (8%)
Query: 296 QVATHNFSSKNILGKGGFGIVYK-GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
Q ++ + +G G G V+K + G V+AVK+++ + +++++ L
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV-LK 79
Query: 355 VHR--NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGK---PILDWSTRKRIALGAARG 409
H +++ +G +T T+ + M G+ A +LK + PI + ++ + +
Sbjct: 80 SHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPE-RILGKMTVAIVKA 136
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L YL E+ +IHRDVK +NILLD+ + + DFG++ L D G ++A
Sbjct: 137 LYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKAKDRSAGCAAYMA 192
Query: 470 PEYLSTGQSSE-----KTDVFGFGILLLELITGQ 498
PE + ++ + DV+ GI L+EL TGQ
Sbjct: 193 PERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 301 NFSSKNILGKGGFGIV----YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV- 355
N+ K ILG+G +V +K ++ V + G+ E+Q E + + +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 356 -----HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H N+++L T T LV+ M G + L K L ++I +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 137
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
LH+ I+HRD+K NILLDD + DFG + LD + V GT ++AP
Sbjct: 138 CALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 192
Query: 471 EYLSTGQSS------EKTDVFGFGILLLELITG 497
E + + ++ D++ G+++ L+ G
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 21/213 (9%)
Query: 301 NFSSKNILGKGGFGIV----YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV- 355
N+ K ILG+G +V +K ++ V + G+ E+Q E + + +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 356 -----HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGL 410
H N+++L T T LV+ M G + L K L ++I +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 411 LYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
LH+ I+HRD+K NILLDD + DFG + LD + V GT ++AP
Sbjct: 125 CALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK--LREVCGTPSYLAP 179
Query: 471 EYLSTGQSS------EKTDVFGFGILLLELITG 497
E + + ++ D++ G+++ L+ G
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 127
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 183
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 355
+ NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMS----NGSVASRLKGKPILDWSTRKRIALGAARGLL 411
H N+++L T + LV+ ++S + AS L G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 472 -YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
L S D++ G + E++T +RAL G +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 100/216 (46%), Gaps = 15/216 (6%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 355
+ NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMS----NGSVASRLKGKPILDWSTRKRIALGAARGLL 411
H N+++L T + LV+ ++S + AS L G P+ K +GL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPL---PLIKSYLFQLLQGLA 119
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 472 -YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
L S D++ G + E++T +RAL G +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 210
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 121
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILL 177
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 10/204 (4%)
Query: 299 THNFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVH 356
+ N+ K LGKG F +V + + + G A K + + Q + E + H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N++RL+ + LV+ ++ G + + + + + Y H
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147
Query: 417 CDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL 473
I+HR++K N+LL + + DFGLA ++ DS GT G+++PE L
Sbjct: 148 ---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 202
Query: 474 STGQSSEKTDVFGFGILLLELITG 497
S+ D++ G++L L+ G
Sbjct: 203 KKDPYSKPVDIWACGVILYILLVG 226
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+++ ++G G FG+VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 360 LRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARGL 410
+RL F + E+ LV Y+ VA + K L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 411 LYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
Y+H I HRD+K N+LLD D + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 470 PEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
PE + + DV+ G +L EL+ GQ +Q ++ + +E+ EM
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLSFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+++ ++G G FG+VY+ L D G +VA+K++ G A E++++ H N+
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-----ELQIMRKLDHCNI 75
Query: 360 LRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARGL 410
+RL F + E+ LV Y+ VA + K L K R L
Sbjct: 76 VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 411 LYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
Y+H I HRD+K N+LLD D + DFG AK L + +V+ + + A
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYRA 190
Query: 470 PEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEM 528
PE + + DV+ G +L EL+ GQ +Q ++ + +E+ EM
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F +LG+G FG V K D A+K+++ I +EV +++ H+ +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL--SEVXLLASLNHQYV 64
Query: 360 LRLYGFCMTPTERLLVYP---------------YMSNGSVASRLKGKPILDWSTRK-RIA 403
+R Y + R V P Y N ++ + + + R+
Sbjct: 65 VRYYAAWLE--RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK---------LLDHQD 454
L Y+H Q IIHR++K NI +D+ +GDFGLAK LD Q+
Sbjct: 123 RQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 455 -----SHVTTAVRGTVGHIAPEYLS-TGQSSEKTDVFGFGILLLELI 495
++T+A+ GT ++A E L TG +EK D + GI+ E I
Sbjct: 180 LPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F K++LG+G +G+V + G +VA+K+++ + ++ E++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 360 LRLYGFCMTPT-----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+ ++ + E ++ M R+ +L + R + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH----------QDSHVTTAVRGT 464
+IHRD+K +N+L++ C+ V DFGLA+++D Q S +T V T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV-AT 185
Query: 465 VGHIAPE-YLSTGQSSEKTDVFGFGILLLEL 494
+ APE L++ + S DV+ G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 355
+ NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMS----NGSVASRLKGKPILDWSTRKRIALGAARGLL 411
H N+++L T + LV+ ++S AS L G P+ K +GL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 120
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 472 -YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
L S D++ G + E++T +RAL G +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 15/216 (6%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 355
+ NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMS----NGSVASRLKGKPILDWSTRKRIALGAARGLL 411
H N+++L T + LV+ ++S AS L G P+ K +GL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 118
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 472 -YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
L S D++ G + E++T +RAL G +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F K++LG+G +G+V + G +VA+K+++ + ++ E++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 360 LRLYGFCMTPT-----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+ ++ + E ++ M R+ +L + R + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH----------QDSHVTTAVRGT 464
+IHRD+K +N+L++ C+ V DFGLA+++D Q S +T V T
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV-AT 185
Query: 465 VGHIAPE-YLSTGQSSEKTDVFGFGILLLEL 494
+ APE L++ + S DV+ G +L EL
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPY----MSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ + + AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F K++LG+G +G+V + G +VA+K+++ + ++ E++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 360 LRLYGFCMTPT-----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+ ++ + E ++ M R+ +L + R + LH
Sbjct: 72 ITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH---QDSHVTTAVRGTVGHI--- 468
+IHRD+K +N+L++ C+ V DFGLA+++D +S T G V +
Sbjct: 130 GS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 469 ---APE-YLSTGQSSEKTDVFGFGILLLEL 494
APE L++ + S DV+ G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 19/199 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL-----KDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG G +G V +L V V+R K + + EV ++ L H N+++L
Sbjct: 45 LGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
Y F LV G + + + + I G+ YLH+ I+
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIV 158
Query: 423 HRDVKAANILLD----DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
HRD+K N+LL+ D +V DFGL+ + ++Q GT +IAPE L +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIV-DFGLSAVFENQKK--MKERLGTAYYIAPEVLRK-KY 214
Query: 479 SEKTDVFGFGILLLELITG 497
EK DV+ G++L L+ G
Sbjct: 215 DEKCDVWSIGVILFILLAG 233
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 14/208 (6%)
Query: 297 VATHNFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMIS 352
+ + + + +LGKG FG V K Q+ V + + + E + EV+++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLK 81
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H N+ +LY F LV + G + + + RI G+ Y
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
H+ KI+HRD+K N+LL+ + + DFGL+ + S GT +IA
Sbjct: 142 XHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA--SKKXKDKIGTAYYIA 196
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE L G EK DV+ G++L L++G
Sbjct: 197 PEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 308 LGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDMYSSY 111
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ E +V ++ G++ + ++ + L R L YLH Q +IHRD+
Sbjct: 112 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDI 167
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
K+ +ILL + DFG + + V GT +APE +S + D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWS 226
Query: 487 FGILLLELITGQ 498
GI+++E+I G+
Sbjct: 227 LGIMVIEMIDGE 238
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 63
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 182
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 62
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 65
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 184
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 68
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 69 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 187
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 101
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 160
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYM----SNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ + AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 32/210 (15%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAV--HRNLLRLYGF 365
+GKG FG V++G + G VAVK E + E E+ + H N+L GF
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENIL---GF 88
Query: 366 CM-------TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLH---- 414
T T+ LV Y +GS+ L + + ++AL A GL +LH
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 147
Query: 415 -EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG---HIAP 470
Q P I HRD+K+ NIL+ + D GLA D + A VG ++AP
Sbjct: 148 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 207
Query: 471 EYLSTG------QSSEKTDVFGFGILLLEL 494
E L +S ++ D++ G++ E+
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 528 M 528
M
Sbjct: 250 M 250
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 359 LLRL-YGFCMTPTERLLVYPYMSNGSVASRL--------KGKPILDWSTRKRIALGAARG 409
++RL Y F + ++ +VY + V + + K L K R
Sbjct: 75 IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 528 M 528
M
Sbjct: 250 M 250
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 123
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 122
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 210
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 122
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 123 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 210
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 95
Query: 367 MTPTERLLVYPYMSNGSVA-----SRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ E +V ++ G++ +R+ + I + L + L LH Q +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCLAVLQALSVLHAQG---V 146
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K+ +ILL + DFG + + V GT +APE +S +
Sbjct: 147 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPE 205
Query: 482 TDVFGFGILLLELITGQ 498
D++ GI+++E++ G+
Sbjct: 206 VDIWSLGIMVIEMVDGE 222
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 15/216 (6%)
Query: 298 ATHNFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAV 355
+ NF +G+G +G+VYK + G VVA+K+++ D G E+ ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLL 411
H N+++L T + LV+ ++ AS L G P+ K +GL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLA 117
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE 471
+ H +++HRD+K N+L++ + DFGLA+ V T+ + APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 472 -YLSTGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
L S D++ G + E++T +RAL G +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 123
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 124
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 180
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 212
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 122
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 123 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 178
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 210
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 121
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 209
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 217
Query: 367 MTPTERLLVYPYMSNGSVA-----SRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ E +V ++ G++ +R+ + I + L + L LH Q +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA------VCLAVLQALSVLHAQG---V 268
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K+ +ILL + DFG + + V GT +APE +S +
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPE 327
Query: 482 TDVFGFGILLLELITGQ 498
D++ GI+++E++ G+
Sbjct: 328 VDIWSLGIMVIEMVDGE 344
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 121
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 121
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 177
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 209
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+ +++ D G E+ ++ H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 120
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 176
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 208
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+ +++ D G E+ ++ H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 119
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ T V T+ + APE L
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV-VTLWYRAPEILL 175
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 207
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 189
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 528 M 528
M
Sbjct: 250 M 250
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 75
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 76 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 136 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 190
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 528 M 528
M
Sbjct: 251 M 251
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 123
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 97
Query: 367 MTPTERLLVYPYMSNGSVA-----SRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ E +V ++ G++ +R+ + I + L + L LH Q +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCLAVLQALSVLHAQG---V 148
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K+ +ILL + DFG + + V GT +APE +S +
Sbjct: 149 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPE 207
Query: 482 TDVFGFGILLLELITGQ 498
D++ GI+++E++ G+
Sbjct: 208 VDIWSLGIMVIEMVDGE 224
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 150
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 95 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 150
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 151 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 244
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAVK + +Q EV ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 78
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 79 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 139 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 193
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 253
Query: 528 M 528
M
Sbjct: 254 M 254
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 93
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 94 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 154 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 208
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 268
Query: 528 M 528
M
Sbjct: 269 M 269
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 140
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 141 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 196
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
K+ +ILL + DFG + + V GT +APE +S + D++
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 255
Query: 487 FGILLLELITGQ 498
GI+++E++ G+
Sbjct: 256 LGIMVIEMVDGE 267
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 74
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 75 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 135 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 189
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 528 M 528
M
Sbjct: 250 M 250
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 261
Query: 528 M 528
M
Sbjct: 262 M 262
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 86
Query: 367 MTPTERLLVYPYMSNGSVA-----SRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ E +V ++ G++ +R+ + I + L + L LH Q +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI------AAVCLAVLQALSVLHAQG---V 137
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
IHRD+K+ +ILL + DFG + + V GT +APE +S +
Sbjct: 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPE 196
Query: 482 TDVFGFGILLLELITGQ 498
D++ GI+++E++ G+
Sbjct: 197 VDIWSLGIMVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 7/192 (3%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G +VAVK++ E+ F EV ++ H N++ +Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEMYNSY 90
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ E +V ++ G++ + ++ + L + L LH Q +IHRD+
Sbjct: 91 LVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDI 146
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
K+ +ILL + DFG + + V GT +APE +S + D++
Sbjct: 147 KSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWS 205
Query: 487 FGILLLELITGQ 498
GI+++E++ G+
Sbjct: 206 LGIMVIEMVDGE 217
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 93 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 148
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 149 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 242
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 169 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 223
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 528 M 528
M
Sbjct: 284 M 284
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAVK + +Q EV ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + A G + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 82
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 83 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 143 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 197
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 257
Query: 528 M 528
M
Sbjct: 258 M 258
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 359
+G+G G VY + + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
+ + E +V Y++ GS+ + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
++IHRD+K+ NILL + DFG + + S +T V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 194
Query: 480 EKTDVFGFGILLLELITGQ 498
K D++ GI+ +E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 86
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 87 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 147 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYR 201
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQ 498
APE + + DV+ G +L EL+ GQ
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAVK + +Q EV ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAVK + +Q EV ++ + H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L W K A R ++ + C
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH---GWMKEKE-ARAKFRQIVSAVQYC 122
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQG 179
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 134
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 228
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 85 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 140
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 141 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 234
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 87
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 88 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 148 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 202
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 262
Query: 528 M 528
M
Sbjct: 263 M 263
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 308 LGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G FG V KG Q V +K + A+ E+ E ++ + ++R
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 72
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ G C + +LV G + L+ + + + G+ YL E
Sbjct: 73 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 128
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSS 479
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++ + S
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 480 EKTDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
K+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 189 SKSDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 224
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 79
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 80 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 140 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 194
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
Query: 528 M 528
M
Sbjct: 255 M 255
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 73 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 128
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 129 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Query: 482 TDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + + G ++ AML+
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 102
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 103 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 163 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 217
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 218 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 277
Query: 528 M 528
M
Sbjct: 278 M 278
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 108
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 109 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 169 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 223
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 224 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283
Query: 528 M 528
M
Sbjct: 284 M 284
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 15/213 (7%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRN 358
NF +G+G +G+VYK + G VVA+K+++ D G E+ ++ H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 359 LLRLYGFCMTPTERLLVYPYMSNG----SVASRLKGKPILDWSTRKRIALGAARGLLYLH 414
+++L T + LV+ ++ AS L G P+ K +GL + H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPL---PLIKSYLFQLLQGLAFCH 123
Query: 415 EQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YL 473
+++HRD+K N+L++ + DFGLA+ V T+ + APE L
Sbjct: 124 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILL 179
Query: 474 STGQSSEKTDVFGFGILLLELITGQRALEYGKA 506
S D++ G + E++T +RAL G +
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDS 211
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L K +I + E+ ++ H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 156
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 212
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 103/269 (38%), Gaps = 79/269 (29%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
+F +G+GGFG+V++ + D A+KR++ N + EV+ ++ H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 360 LRLY-GFCMTPTERL--------------------------------LVYPYMSNGSVAS 386
+R + + TP E+ + P+ + +V
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 387 RLKGKP---------------ILDWSTRK------------RIALGAARGLLYLHEQCDP 419
P + DW R+ I + A + +LH +
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK--- 183
Query: 420 KIIHRDVKAANIL--LDDCCEAVVGDFGLAKLLDHQDSHVTTAV--------RGTVG--- 466
++HRD+K +NI +DD + VGDFGL +D + T G VG
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVK--VGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKL 241
Query: 467 HIAPEYLSTGQSSEKTDVFGFGILLLELI 495
+++PE + S K D+F G++L EL+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 153
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 154 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 214 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 268
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 328
Query: 528 M 528
M
Sbjct: 329 M 329
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNAMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 112
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 113 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 173 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 227
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 228 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 287
Query: 528 M 528
M
Sbjct: 288 M 288
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 24/241 (9%)
Query: 301 NFSSKNILGKGGFGIVYKGILQD-GTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRN 358
+++ ++G G FG+VY+ L D G +VA+K+ L+D E+Q +++ H N
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD------HCN 110
Query: 359 LLRLYGFCMTPTERL------LVYPYMSNG--SVASRL-KGKPILDWSTRKRIALGAARG 409
++RL F + E+ LV Y+ VA + K L K R
Sbjct: 111 IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 410 LLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
L Y+H I HRD+K N+LLD D + DFG AK L + +V+ + +
Sbjct: 171 LAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC--SRYYR 225
Query: 469 APEYL-STGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLE 527
APE + + DV+ G +L EL+ GQ +Q ++ + +E+ E
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 285
Query: 528 M 528
M
Sbjct: 286 M 286
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAV+ + +Q EV ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 10/214 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 437 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 492
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L +++ G V APE ++ + S K
Sbjct: 493 RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 482 TDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + + G ++ AML+
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 35/277 (12%)
Query: 308 LGKGGFGIVYKGILQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
LG+G F ++KG+ ++ T V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ YG C+ E +LV ++ GS+ + L K K ++ + +A A + +L E
Sbjct: 75 VLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT- 133
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA---VRGTVGHIAPEYLST 475
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 476 GQS-SEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDL 534
++ + TD + FG L E+ +G ++ + LD ++KL+ D+
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFYEDRHQ 236
Query: 535 KNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
EL ++ C Y P HRP ++R L
Sbjct: 237 LPAPKAAELANLINN---CMDYEPDHRPSFRAIIRDL 270
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 35/277 (12%)
Query: 308 LGKGGFGIVYKGILQD--------GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
LG+G F ++KG+ ++ T V +K L + E F+ M+S H++L
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEA-ASMMSKLSHKHL 74
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRL-KGKPILDWSTRKRIALGAARGLLYLHEQCD 418
+ YG C E +LV ++ GS+ + L K K ++ + +A A + +L E
Sbjct: 75 VLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFLEENT- 133
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA---VRGTVGHIAPEYLST 475
+IH +V A NILL + G+ KL D S ++ + + PE +
Sbjct: 134 --LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIEN 191
Query: 476 GQS-SEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDKDL 534
++ + TD + FG L E+ +G ++ + LD ++KL+ D+
Sbjct: 192 PKNLNLATDKWSFGTTLWEICSG---------GDKPLSALD------SQRKLQFYEDRHQ 236
Query: 535 KNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
EL ++ C Y P HRP ++R L
Sbjct: 237 LPAPKAAELANLINN---CMDYEPDHRPSFRAIIRDL 270
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 357
N+ LG+G FG V G VA+K + ++Q + E+ + L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
++++LY + E ++V Y N + + + + +R + Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 122
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG- 476
KI+HRD+K N+LLD+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 477 QSSEKTDVFGFGILL 491
+ + DV+ G++L
Sbjct: 179 YAGPEVDVWSCGVIL 193
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 357
N+ LG+G FG V G VA+K + ++Q + E+ + L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
++++LY + E ++V Y N + + + + +R + Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 132
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG- 476
KI+HRD+K N+LLD+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 477 QSSEKTDVFGFGILL 491
+ + DV+ G++L
Sbjct: 189 YAGPEVDVWSCGVIL 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVH 356
+ S +G G +G V I + G VA+K+L EI + E+ ++ H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQH 82
Query: 357 RNLLRLYGFCMTPTERL-------LVYPYMSNGSVASRLKGKPILDWSTRK--RIALGAA 407
N++ L TP L LV P+M ++ G L +S K +
Sbjct: 83 ENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTD--LQKIMG---LKFSEEKIQYLVYQML 136
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+GL Y+H ++HRD+K N+ +++ CE + DFGLA+ H D+ +T V T +
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWY 189
Query: 468 IAPEY-LSTGQSSEKTDVFGFGILLLELITGQ 498
APE LS ++ D++ G ++ E++TG+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 357
N+ LG+G FG V G VA+K + ++Q + E+ + L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
++++LY + E ++V Y N + + + + +R + Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 131
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG- 476
KI+HRD+K N+LLD+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 477 QSSEKTDVFGFGILL 491
+ + DV+ G++L
Sbjct: 188 YAGPEVDVWSCGVIL 202
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVH 356
+ S +G G +G V I + G VA+K+L EI + E+ ++ H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQH 100
Query: 357 RNLLRLYGFCMTPTERL-------LVYPYMSNGSVASRLKGKPILDWSTRK--RIALGAA 407
N++ L TP L LV P+M ++ G +++S K +
Sbjct: 101 ENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTD--LQKIMG---MEFSEEKIQYLVYQML 154
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+GL Y+H ++HRD+K N+ +++ CE + DFGLA+ H D+ +T V T +
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVV-TRWY 207
Query: 468 IAPEY-LSTGQSSEKTDVFGFGILLLELITGQ 498
APE LS ++ D++ G ++ E++TG+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 10/195 (5%)
Query: 301 NFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ--FQTEVEMISLAVHR 357
N+ LG+G FG V G VA+K + ++Q + E+ + L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
++++LY + E ++V Y N + + + + +R + Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH- 126
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG- 476
KI+HRD+K N+LLD+ + DFGL+ ++ D + G+ + APE +S
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 477 QSSEKTDVFGFGILL 491
+ + DV+ G++L
Sbjct: 183 YAGPEVDVWSCGVIL 197
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 14/216 (6%)
Query: 308 LGKGGFGIVYKGILQ------DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G FG V KG Q V +K + A+ E+ E ++ + ++R
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL--AEANVMQQLDNPYIVR 435
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ G C + +LV G + L+ + + + G+ YL E
Sbjct: 436 MIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NF 491
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT--VGHIAPEYLSTGQSS 479
+HRD+ A N+LL A + DFGL+K L +++ G V APE ++ + S
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 480 EKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
K+DV+ FG+L+ E + + G ++ AML+
Sbjct: 552 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQS 478
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQS 478
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 197 DARSDVYSLGCVLYEVLTGE 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 12/215 (5%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRL----KDGNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG G FG V KG Q VV + + N + + E ++ + ++R+
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 364 GFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIH 423
G C + +LV G + L+ + + + G+ YL E +H
Sbjct: 79 GICEAES-WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVH 134
Query: 424 RDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
RD+ A N+LL A + DFGL+K L D T + V APE ++ + S K
Sbjct: 135 RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 482 TDVFGFGILLLELIT-GQRALEYGKAANQKGAMLD 515
+DV+ FG+L+ E + GQ+ G ++ AML+
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLE 228
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 149
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 205
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 87
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 143
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 199
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 200 NQTVDIWSVGCIMAELLTGR 219
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 207
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ + +GKG F V + +L G VAVK + +Q EV ++ + H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 130
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + T G+ + APE L G
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPE-LFQG 187
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSG 210
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 421 IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTVGHIAPEYLSTGQS 478
IIHRDVK ANI++ V DFG+A+ + + V T AV GT +++PE
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 479 SEKTDVFGFGILLLELITGQ 498
++DV+ G +L E++TG+
Sbjct: 214 DARSDVYSLGCVLYEVLTGE 233
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 308 LGKGGFGIVYKGILQDG---TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+G G FG+ +++D +VAVK ++ G AI +Q + + SL H N++R
Sbjct: 28 IGSGNFGVA--RLMRDKLTKELVAVKYIERGAAIDENVQREI-INHRSLR-HPNIVRFKE 83
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
+TPT ++ Y S G + R+ + G+ Y H +I HR
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHR 140
Query: 425 DVKAANILLD--DCCEAVVGDFGLAK--LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSE 480
D+K N LLD + DFG +K +L Q + GT +IAPE L +
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLRQEYDG 196
Query: 481 K-TDVFGFGILLLELITGQRALE 502
K DV+ G+ L ++ G E
Sbjct: 197 KIADVWSCGVTLYVMLVGAYPFE 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 149
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 205
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 146
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 202
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 9/234 (3%)
Query: 300 HNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQF---QTEVEMISLAV- 355
+F ++G+G + V L+ + R+ + + QTE + A
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 356 HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
H L+ L+ T + V Y++ G + ++ + L + + + L YLHE
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
+ II+RD+K N+LLD + D+G+ K + T+ GT +IAPE L
Sbjct: 172 R---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 476 GQSSEKTDVFGFGILLLELITGQRALE-YGKAANQKGAMLDWVKKIHQEKKLEM 528
D + G+L+ E++ G+ + G + N D++ ++ EK++ +
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 146
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 202
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 206
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 141
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 197
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 206
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 140
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 98
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 154
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 210
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 211 NQTVDIWSVGCIMAELLTGR 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 146
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 202
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAVK + +Q EV + + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYL----VAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + A G + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 206
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 156
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 212
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 141
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 197
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 301 NFSSKNILGKGGFG-IVYKGILQDGTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHR 357
+F K++LG G G IVY+G+ D VAVKR+ + + E+Q E + H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDE-----HP 78
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA-LG---------AA 407
N++R FC T +R Y +A L + ++ +K A LG
Sbjct: 79 NVIRY--FC-TEKDRQFQY-------IAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLD-----DCCEAVVGDFGLAKLL---DHQDSHVTT 459
GL +LH I+HRD+K NIL+ +A++ DFGL K L H S +
Sbjct: 129 SGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR-RS 184
Query: 460 AVRGTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGQRALEYGKAANQKGAML 514
V GT G IAPE LS T D+F G + +I+ + + +GK+ ++ +L
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS-EGSHPFGKSLQRQANIL 241
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 156
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 157 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 212
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 155
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 156 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 211
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 140
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 86
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 142
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 143 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 198
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 199 NQTVDIWSVGCIMAELLTGR 218
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%)
Query: 111 GPIPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
GPIP I +LT+L L +++ +G IP L +++L + F+ N+LSG P S++S+
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 171 LIFLDLSYNNLSGPVP 186
L+ + N +SG +P
Sbjct: 151 LVGITFDGNRISGAIP 166
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 112 PIPAEIGRLTKLQTLDLSN-NFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSLASMTQ 170
PIP+ + L L L + N G IP ++ L L Y+ + ++SGA P L+ +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 171 LIFLDLSYNNLSGPVPRFSAKTFNIVGNPLIC--ATGSEPDCYGT 213
L+ LD SYN LSG +P + N+VG +G+ PD YG+
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 50/150 (33%), Gaps = 47/150 (31%)
Query: 85 LSGTLSPSIGXXXXXXXXXXXXXXXXGPIPAEIGRLTKLQT------------------- 125
LSGTL PSI G IP G +KL T
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196
Query: 126 -----LDLSNNFFTGEIPSSLG--------HL---------------RSLQYMRFNNNSL 157
+DLS N G+ G HL ++L + NN +
Sbjct: 197 LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRI 256
Query: 158 SGAFPTSLASMTQLIFLDLSYNNLSGPVPR 187
G P L + L L++S+NNL G +P+
Sbjct: 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 163
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 219
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 164
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 220
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 167
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 223
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 164
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 220
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 359
+G+G G VY + + G VA++++ +Q Q + E+I + V R N+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 80
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
+ + E +V Y++ GS+ + + +D + + L +LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
++IHR++K+ NILL + DFG + + S +T V GT +APE ++
Sbjct: 137 QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYG 195
Query: 480 EKTDVFGFGILLLELITGQ 498
K D++ GI+ +E+I G+
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 300 HNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISL 353
+ S ILG G FG V+K G+ ++ + +KD + EI +++
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD---- 144
Query: 354 AVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYL 413
H NL++LY + + +LV Y+ G + R I+D S L +L++
Sbjct: 145 --HANLIQLYDAFESKNDIVLVMEYVDGGELFDR-----IIDESYN----LTELDTILFM 193
Query: 414 HEQCDP-------KIIHRDVKAANILL--DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGT 464
+ C+ I+H D+K NIL D + + DFGLA+ ++ GT
Sbjct: 194 KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR--YKPREKLKVNFGT 251
Query: 465 VGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+APE ++ S TD++ G++ L++G
Sbjct: 252 PEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V + F +LGKG FG ++ G A+K LK + + T E L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + + +++RD+K N++LD + DFGL K +D GT ++APE
Sbjct: 267 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEV 323
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 163
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 164 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 219
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V + F +LGKG FG ++ G A+K LK + + T E L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + + +++RD+K N++LD + DFGL K +D GT ++APE
Sbjct: 264 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEV 320
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 359
+G+G G VY + + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
+ + E +V Y++ GS+ + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
++IHRD+K+ NILL + DFG + + S + V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 194
Query: 480 EKTDVFGFGILLLELITGQ 498
K D++ GI+ +E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 359
+G+G G VY + + G VA++++ +Q Q + E+I + V R N+
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 80
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
+ + E +V Y++ GS+ + + +D + + L +LH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN--- 136
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
++IHRD+K+ NILL + DFG + + S + V GT +APE ++
Sbjct: 137 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYG 195
Query: 480 EKTDVFGFGILLLELITGQ 498
K D++ GI+ +E+I G+
Sbjct: 196 PKVDIWSLGIMAIEMIEGE 214
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
+GKG F +V + + L G A K + + Q + E + L H N++RL+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
LV+ ++ G + + + + +L+ H+ ++HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRD 128
Query: 426 VKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K N+LL C+ + DFGLA + D GT G+++PE L +
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPV 187
Query: 483 DVFGFGILLLELITG 497
D++ G++L L+ G
Sbjct: 188 DIWACGVILYILLVG 202
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMI--SLAVHR-----NL 359
+G+G G VY + + G VA++++ +Q Q + E+I + V R N+
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMN--------LQQQPKKELIINEILVMRENKNPNI 79
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
+ + E +V Y++ GS+ + + +D + + L +LH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN--- 135
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
++IHRD+K+ NILL + DFG + + S + V GT +APE ++
Sbjct: 136 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYG 194
Query: 480 EKTDVFGFGILLLELITGQ 498
K D++ GI+ +E+I G+
Sbjct: 195 PKVDIWSLGIMAIEMIEGE 213
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 124 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 179
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V ++ G +AVK+L + +I + E+ ++ H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 117
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 173
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS 479
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE +
Sbjct: 174 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 229
Query: 480 EKT-DVFGFGILLLELITGQ 498
T D++ G ++ EL+TG+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V + F +LGKG FG ++ G A+K LK + + T E L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + + +++RD+K N++LD + DFGL K +D GT ++APE
Sbjct: 126 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEV 182
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 21/220 (9%)
Query: 291 QFRELQVATHNFSSKNILGKGGFG---IVYKGILQDGTVVAVKRLKDGNAI--GGEIQFQ 345
+ R LQ+ ++ ++G+G FG +V Q V A+K L I F
Sbjct: 66 KIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQ--KVYAMKLLSKFEMIKRSDSAFFW 123
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLL--VYPYMSNGSVASRLKGKPILDWSTRKRIA 403
E ++++ A +++L FC ++ L V YM G + + + + K
Sbjct: 124 EERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV----PEKWAK 177
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD-SHVTTAVR 462
A +L L +IHRDVK N+LLD + DFG +D H TAV
Sbjct: 178 FYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV- 236
Query: 463 GTVGHIAPEYLST----GQSSEKTDVFGFGILLLELITGQ 498
GT +I+PE L + G + D + G+ L E++ G
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 276
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VAV+ + +Q EV ++ + H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T LV Y S G V L + +++ A R ++ + C
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYL----VAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + G+ + APE L G
Sbjct: 130 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPE-LFQG 186
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 126 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 181
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G G FG+ Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+TPT +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 427 KAANILLD--DCCEAVVGDFGLAK--LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
K N LLD + DFG +K +L Q + GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 483 -DVFGFGILLLELITGQRALE 502
DV+ G+ L ++ G E
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFE 218
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 130/300 (43%), Gaps = 57/300 (19%)
Query: 304 SKNILGKGGFG-IVYKGILQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMISLAVHRNLL 360
S+ ILG G G +V++G Q G VAVKR L D I EI+ TE + H N++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVI 72
Query: 361 RLYGFCMTPTERLL-VYPYMSNGSVASRLKGKPILDWSTRKR-----IAL--GAARGLLY 412
R Y C T+R L + + N ++ ++ K + D + + + I+L A G+ +
Sbjct: 73 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 413 LHEQCDPKIIHRDVKAANILLD-------------DCCEAVVGDFGLAKLLDHQDSHVTT 459
LH KIIHRD+K NIL+ + ++ DFGL K LD S T
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 460 AVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ GT G APE L + + D+F G + +++ + +G ++
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSR 246
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ ++ + + + K L +DR + E + + P RP +V+R
Sbjct: 247 ESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 345 QTEVEMISLAV-HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA 403
QTE + A H L+ L+ T + V Y++ G + ++ + L + +
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 116
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRG 463
+ L YLHE+ II+RD+K N+LLD + D+G+ K + T+ G
Sbjct: 117 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCG 172
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE-YGKAANQKGAMLDWVKKIHQ 522
T +IAPE L D + G+L+ E++ G+ + G + N D++ ++
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 232
Query: 523 EKKLEM 528
EK++ +
Sbjct: 233 EKQIRI 238
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + D + I RGL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLI-YQILRGLKYIHSA--- 140
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D +T V T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 308 LGKGGFGIVYKGILQD-GTVVAVKRL--KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+G+G +G+V+K +D G +VA+K+ + + + +I + E+ M+ H NL+ L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR-EIRMLKQLKHPNLVNLLE 69
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
LV+ Y + + + + + K I + + + H+ IHR
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHR 126
Query: 425 DVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGHIAPEYL-STGQSS 479
DVK NIL+ + DFG A+LL D+ D V T + +PE L Q
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLVGDTQYG 181
Query: 480 EKTDVFGFGILLLELITG 497
DV+ G + EL++G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V + F +LGKG FG ++ G A+K LK + + T E L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + + +++RD+K N++LD + DFGL K +D GT ++APE
Sbjct: 124 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEV 180
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 86/206 (41%), Gaps = 6/206 (2%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V + F +LGKG FG ++ G A+K LK + + T E L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + + +++RD+K N++LD + DFGL K +D GT ++APE
Sbjct: 125 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEV 181
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 345 QTEVEMISLAV-HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA 403
QTE + A H L+ L+ T + V Y++ G + ++ + L + +
Sbjct: 53 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 112
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRG 463
+ L YLHE+ II+RD+K N+LLD + D+G+ K + T+ G
Sbjct: 113 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCG 168
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE-YGKAANQKGAMLDWVKKIHQ 522
T +IAPE L D + G+L+ E++ G+ + G + N D++ ++
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 228
Query: 523 EKKLEM 528
EK++ +
Sbjct: 229 EKQIRI 234
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 308 LGKGGFGIVYKGIL-QDGTVVAVKRLKDGNAIGGEI---QFQTEVEMISLAVHRNLLRLY 363
+G G +G V + + G VA+K+L E+ + E+ ++ H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLY--RPFQSELFAKRAYRELRLLKHMRHENVIGLL 90
Query: 364 GFCMTPTERL-------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP E L LV P+M G+ +L L + + +GL Y+H
Sbjct: 91 D-VFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY-LST 475
IIHRD+K N+ +++ CE + DFGLA+ DS + V T + APE L+
Sbjct: 148 G---IIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXV-VTRWYRAPEVILNW 200
Query: 476 GQSSEKTDVFGFGILLLELITGQ 498
+ ++ D++ G ++ E+ITG+
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAPEV 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + D+GLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 343 QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI 402
+ E+ ++ H N+++L+ LV + G + ++ + D I
Sbjct: 92 EIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANI 151
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDD---CCEAVVGDFGLAKLLDHQDSHVTT 459
G+ YLH+ I+HRD+K NILL++ + DFGL+ +D +
Sbjct: 152 MKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-SKDYKLRD 207
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ GT +IAPE L + +EK DV+ G+++ L+ G
Sbjct: 208 RL-GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 7/206 (3%)
Query: 296 QVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLA 354
+V ++F +LGKG FG ++ G A+K L+ I + T E L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 355 VHRN-LLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
R+ L + +RL V Y + G + L + + + L Y
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
LH + +++RD+K N++LD + DFGL K D GT ++APE
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEV 176
Query: 473 LSTGQSSEKTDVFGFGILLLELITGQ 498
L D +G G+++ E++ G+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 345 QTEVEMISLAV-HRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA 403
QTE + A H L+ L+ T + V Y++ G + ++ + L + +
Sbjct: 68 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 127
Query: 404 LGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRG 463
+ L YLHE+ II+RD+K N+LLD + D+G+ K + T+ G
Sbjct: 128 AEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCG 183
Query: 464 TVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALE-YGKAANQKGAMLDWVKKIHQ 522
T +IAPE L D + G+L+ E++ G+ + G + N D++ ++
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 243
Query: 523 EKKLEM 528
EK++ +
Sbjct: 244 EKQIRI 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 18/221 (8%)
Query: 301 NFSSKNIL---GKGGFGIVYKGILQDG---TVVAVKRLKDGNAIG-GEIQ-FQTEVEMIS 352
NF IL GKG FG V I+Q + A+K + + E++ E++++
Sbjct: 13 NFDHFEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQ 70
Query: 353 LAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
H L+ L+ + +V + G + L+ T K L Y
Sbjct: 71 GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY 472
L Q +IIHRD+K NILLD+ + DF +A +L +++ +TT GT ++APE
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP-RETQITTMA-GTKPYMAPEM 185
Query: 473 LSTGQS---SEKTDVFGFGILLLELITGQRALEYGKAANQK 510
S+ + S D + G+ EL+ G+R + + K
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 283 SLGNLRRFQFRELQVATHN---FSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAI 338
SL LR Q++ L+ F +LG+GGFG V+ ++ G + A K+L
Sbjct: 165 SLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 339 GGEIQFQTEVEMISLA-VHRNLLRLYGFCM-TPTERLLVYPYMSNGSVASRL----KGKP 392
+ VE LA VH + + T T+ LV M+ G + + + P
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 393 ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
GL +LH++ II+RD+K N+LLDD + D GLA L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
+ T GT G +APE L + D F G+ L E+I +
Sbjct: 342 GQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAI---GGEIQFQTEVEMISLAVHR 357
+F ++GKG FG V + V ++ AI E +E ++ V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 358 NLLRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
L F ++L V Y++ G + L+ + + A A L YLH
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKL-LDHQDSHVTTAVRGTVGHIAPEYLST 475
I++RD+K NILLD V+ DFGL K ++H + T+ GT ++APE L
Sbjct: 159 ---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHK 213
Query: 476 GQSSEKTDVFGFGILLLELITG 497
D + G +L E++ G
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 22/208 (10%)
Query: 302 FSSKNILGKGGFGIVYKGILQD---GTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHR 357
F K LG G FG V+ ++++ G +K + KD + + E Q + E+E++ H
Sbjct: 24 FIFKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLDHP 80
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRL-----KGKPILDWSTRKRIALGAARGLLY 412
N+++++ +V G + R+ +GK + + + + L Y
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK-QMMNALAY 139
Query: 413 LHEQCDPKIIHRDVKAANILLDDC---CEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
H Q ++H+D+K NIL D + DFGLA+L D H T A GT ++A
Sbjct: 140 FHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-SDEHSTNAA-GTALYMA 194
Query: 470 PEYLSTGQSSEKTDVFGFGILLLELITG 497
PE + K D++ G+++ L+TG
Sbjct: 195 PEVFKRDVTF-KCDIWSAGVVMYFLLTG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGG--EIQFQTEVEMISLAVHRNLLRLYGF 365
LGKG F +V + + + T ++ + + + + E + L H N++RL+
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
LV+ ++ G + + + + + ++H+ I+HRD
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH---DIVHRD 155
Query: 426 VKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K N+LL C+ + DFGLA + + GT G+++PE L +
Sbjct: 156 LKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPV 214
Query: 483 DVFGFGILLLELITG 497
D++ G++L L+ G
Sbjct: 215 DIWACGVILYILLVG 229
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 290 FQFRE-LQVATHNFSSKNILGKGGFGIVYK-GILQDGTVVAVKRLKDGNAIGGEIQFQTE 347
+++RE + ATH LG+G FG V++ Q G AVK+++ E+ E
Sbjct: 67 YEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEE 116
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAA 407
+ + ++ LYG + + GS+ +K + L R LG A
Sbjct: 117 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQA 175
Query: 408 -RGLLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDH----QDSHVTTAV 461
GL YLH + +I+H DVKA N+LL D A + DFG A L +D +
Sbjct: 176 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYI 232
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT H+APE + K DV+ ++L ++ G
Sbjct: 233 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 283 SLGNLRRFQFRELQVATHN---FSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAI 338
SL LR Q++ L+ F +LG+GGFG V+ ++ G + A K+L
Sbjct: 165 SLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 339 GGEIQFQTEVEMISLA-VHRNLLRLYGFCM-TPTERLLVYPYMSNGSVASRL----KGKP 392
+ VE LA VH + + T T+ LV M+ G + + + P
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 393 ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
GL +LH++ II+RD+K N+LLDD + D GLA L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
+ T GT G +APE L + D F G+ L E+I +
Sbjct: 342 GQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 308 LGKGGFGIVYKGILQD---GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+G G FG+ +++D +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGAGNFGVA--RLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKE 82
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHR 424
+TPT +V Y S G + R+ + G+ Y H ++ HR
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM---QVAHR 139
Query: 425 DVKAANILLD--DCCEAVVGDFGLAKL-LDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
D+K N LLD + DFG +K + H S +AV GT +IAPE L + K
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSKASVLH--SQPKSAV-GTPAYIAPEVLLKKEYDGK 196
Query: 482 T-DVFGFGILLLELITGQRALE 502
DV+ G+ L ++ G E
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFE 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 95/226 (42%), Gaps = 14/226 (6%)
Query: 283 SLGNLRRFQFRELQVATHN---FSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAI 338
SL LR Q++ L+ F +LG+GGFG V+ ++ G + A K+L
Sbjct: 165 SLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 339 GGEIQFQTEVEMISLA-VHRNLLRLYGFCM-TPTERLLVYPYMSNGSVASRL----KGKP 392
+ VE LA VH + + T T+ LV M+ G + + + P
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 393 ILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDH 452
GL +LH++ II+RD+K N+LLDD + D GLA L
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 453 QDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
+ T GT G +APE L + D F G+ L E+I +
Sbjct: 342 GQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 343 QFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRI 402
F+ E+++I+ + L G E ++Y YM N S+ + +LD + I
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 403 ALGAARGLL--------YLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQD 454
+ + ++ Y+H + I HRDVK +NIL+D + DFG ++ + D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM--VD 204
Query: 455 SHVTTAVRGTVGHIAPEYLSTGQSSE--KTDVFGFGILL 491
+ + RGT + PE+ S S K D++ GI L
Sbjct: 205 KKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
+ ARG+ +L + K IHRD+ A NILL + + DFGLA+ + +V
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIH 521
R + +APE + S K+DV+ +G+LL E+ + + G ++ D+ ++
Sbjct: 262 RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDE-----DFCSRLR 316
Query: 522 QEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLEGDGL 576
+ ++ E+ Q+ L C P RP+ +E+V L GD L
Sbjct: 317 E----------GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL-GDLL 360
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHV--TTAVRGTV 465
RGL Y+H ++HRD+K +N+L++ C+ + DFGLA++ D + H T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D + V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G FG V+K + G VA+K+ L + G I E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 366 CMT---PTER-----LLVYPYMSN--GSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
C T P R LV+ + + + S + K L S KR+ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIHR 143
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGHIAPE 471
KI+HRD+KAAN+L+ + DFGLA+ + Q + V T+ + PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPE 199
Query: 472 -YLSTGQSSEKTDVFGFGILLLELIT 496
L D++G G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 34/280 (12%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
NF +K L + G ++KG Q + VV V +++D + F E + + H N+
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR-DFNEECPRLRIFSHPNV 69
Query: 360 LRLYGFCMTPT--ERLLVYPYMSNGSVASRLKGKP--ILDWSTRKRIALGAARGLLYLHE 415
L + G C +P L+ +M GS+ + L ++D S + AL ARG+ +LH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH- 128
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
+P I + + ++++D+ A + + D + S + +APE L
Sbjct: 129 TLEPLIPRHALNSRSVMIDEDMTARIS------MADVKFSFQSPGRMYAPAWVAPEALQK 182
Query: 476 ---GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDK 532
+ D++ F +LL EL+T R + + +N + M K+ E L +
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVT--REVPFADLSNMEIGM-----KVALE-GLRPTIPP 234
Query: 533 DLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
+ + ++ +C PA RPK +V +LE
Sbjct: 235 GISPHVSKL--------MKICMNEDPAKRPKFDMIVPILE 266
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D + V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 167
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D + V T + APE L+
Sbjct: 168 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGYV-ATRWYRAPEIMLNWMHY 223
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 141 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 132 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 164
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D + V T + APE L+
Sbjct: 165 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXGXV-ATRWYRAPEIMLNWMHY 220
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL-----DHQDSHVTTAVR 462
RGL Y+H ++IHRD+K +N+L+++ CE +GDFG+A+ L +HQ + T
Sbjct: 170 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTEYV 224
Query: 463 GTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGQRALEYGK 505
T + APE LS + ++ D++ G + E++ +R L GK
Sbjct: 225 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGK 267
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 306 NILGKGGFGIVYKGILQDG------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
++GKG F +V + I ++ +V V + + E + E + + H ++
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 88
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-D 418
+ L + +V+ +M + + + + + +A R +L C D
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 419 PKIIHRDVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
IIHRDVK N+LL ++ +GDFG+A L + V GT +APE +
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKR 207
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ DV+G G++L L++G
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 133 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 155 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 140
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H D + V T + APE L+
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFV-ATRWYRAPEIMLNWMHY 196
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 143 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 239
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 240 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 296
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 297 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 225
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 226 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 282
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 283 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL-----DHQDSHVTTAVR 462
RGL Y+H ++IHRD+K +N+L+++ CE +GDFG+A+ L +HQ + T
Sbjct: 169 RGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ--YFMTEYV 223
Query: 463 GTVGHIAPE-YLSTGQSSEKTDVFGFGILLLELITGQRALEYGK 505
T + APE LS + ++ D++ G + E++ +R L GK
Sbjct: 224 ATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGK 266
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 290 FQFRE-LQVATHNFSSKNILGKGGFGIVYK-GILQDGTVVAVKRLKDGNAIGGEIQFQTE 347
+++RE + ATH LG+G FG V++ Q G AVK+++ E+ E
Sbjct: 86 YEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRL------EVFRAEE 135
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAA 407
+ + ++ LYG + + GS+ +K + L R LG A
Sbjct: 136 LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLP-EDRALYYLGQA 194
Query: 408 -RGLLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLL--DHQDSHVTTA--V 461
GL YLH + +I+H DVKA N+LL D A + DFG A L D + T +
Sbjct: 195 LEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYI 251
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT H+APE + K DV+ ++L ++ G
Sbjct: 252 PGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G FG V+K + G VA+K+ L + G I E++++ L H N++ L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 366 CMT---PTER-----LLVYPYMSN--GSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
C T P R LV+ + + + S + K L S KR+ GL Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIHR 142
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGHIAPE 471
KI+HRD+KAAN+L+ + DFGLA+ + Q + V T+ + PE
Sbjct: 143 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPE 198
Query: 472 -YLSTGQSSEKTDVFGFGILLLELIT 496
L D++G G ++ E+ T
Sbjct: 199 LLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G G FG+ Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 83
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+TPT +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 84 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 140
Query: 427 KAANILLD--DCCEAVVGDFGLAK--LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
K N LLD + DFG +K +L Q + GT +IAPE L + K
Sbjct: 141 KLENTLLDGSPAPRLKICDFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLKKEYDGKV 196
Query: 483 -DVFGFGILLLELITGQRALE 502
DV+ G+ L ++ G E
Sbjct: 197 ADVWSCGVTLYVMLVGAYPFE 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 90/192 (46%), Gaps = 7/192 (3%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G+G GIV + G VAVK + E+ F EV ++ H N++ +Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMRDYQHFNVVEMYKSY 111
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+ E ++ ++ G++ + + L+ + + L YLH Q +IHRD+
Sbjct: 112 LVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167
Query: 427 KAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFG 486
K+ +ILL + DFG + +D + GT +APE +S + + D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 487 FGILLLELITGQ 498
GI+++E++ G+
Sbjct: 227 LGIMVIEMVDGE 238
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 300 HNFSSKNILGKGGFGIVYKGILQ-DGTVVAVK-------RLKDGNAIGGEIQFQTEVE-- 349
+ K+++G+G +V + + + G AVK RL E++ T E
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQL--EEVREATRRETH 151
Query: 350 -MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAAR 408
+ +A H +++ L + + LV+ M G + L K L + I
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHI 468
+ +LH I+HRD+K NILLDD + + DFG + L+ + + GT G++
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTPGYL 266
Query: 469 APEYLSTGQSS------EKTDVFGFGILLLELITG 497
APE L ++ D++ G++L L+ G
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 93/222 (41%), Gaps = 14/222 (6%)
Query: 287 LRRFQFRELQVATHN---FSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEI 342
LR Q++ L+ F +LG+GGFG V+ ++ G + A K+L +
Sbjct: 169 LRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKG 228
Query: 343 QFQTEVEMISLA-VHRNLLRLYGFCM-TPTERLLVYPYMSNGSVASRL----KGKPILDW 396
VE LA VH + + T T+ LV M+ G + + + P
Sbjct: 229 YQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 397 STRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
GL +LH++ II+RD+K N+LLDD + D GLA L +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK 345
Query: 457 VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQ 498
T GT G +APE L + D F G+ L E+I +
Sbjct: 346 -TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G FG V+K + G VA+K+ L + G I E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 366 CMT---PTER-----LLVYPYMSN--GSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
C T P R LV+ + + + S + K L S KR+ GL Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIHR 143
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGHIAPE 471
KI+HRD+KAAN+L+ + DFGLA+ + Q + V T+ + PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPE 199
Query: 472 -YLSTGQSSEKTDVFGFGILLLELIT 496
L D++G G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 302 FSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNLL 360
++ +N +G+G +G V K +Q GT + K ++ +F+ E+E++ H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
RLY T+ LV + G + R+ K + S RI + Y H+
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---N 126
Query: 421 IIHRDVKAANIL-LDDCCEAVVG--DFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ HRD+K N L L D ++ + DFGLA T GT +++P+ L G
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLE-GL 183
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D + G+++ L+ G
Sbjct: 184 YGPECDEWSAGVMMYVLLCG 203
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G FG V+K + G VA+K+ L + G I E++++ L H N++ L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 366 CMT---PTER-----LLVYPYMSN--GSVASRLKGKPILDWSTRKRIALGAARGLLYLHE 415
C T P R LV+ + + + S + K L S KR+ GL Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL--SEIKRVMQMLLNGLYYIHR 143
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL----DHQDSHVTTAVRGTVGHIAPE 471
KI+HRD+KAAN+L+ + DFGLA+ + Q + V T+ + PE
Sbjct: 144 N---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV-VTLWYRPPE 199
Query: 472 -YLSTGQSSEKTDVFGFGILLLELIT 496
L D++G G ++ E+ T
Sbjct: 200 LLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 302 FSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEI-QFQTEVEMISLAVHRNLL 360
++ +N +G+G +G V K +Q GT + K ++ +F+ E+E++ H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
RLY T+ LV + G + R+ K + S RI + Y H+
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---N 143
Query: 421 IIHRDVKAANIL-LDDCCEAVVG--DFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
+ HRD+K N L L D ++ + DFGLA T GT +++P+ L G
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLE-GL 200
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D + G+++ L+ G
Sbjct: 201 YGPECDEWSAGVMMYVLLCG 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VA+K + +Q EV ++ + H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T L+ Y S G V L + +++ A R ++ + C
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + + A G + APE L G
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFSN--EFTVGGKLDAFCGAPPYAAPE-LFQG 187
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 20/238 (8%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGILQDGT--VVAVKRLKDGNAI--GGEIQFQT 346
+ R+L++ ++ ++G+G FG V + + T V A+K L I F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 347 EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
E ++++ A +++L+ +V YM G + + + + K
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYT 179
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG 466
A +L L IHRDVK N+LLD + DFG ++ + GT
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 467 HIAPEYLST----GQSSEKTDVFGFGILLLELITGQRAL-------EYGKAANQKGAM 513
+I+PE L + G + D + G+ L E++ G Y K N K ++
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 297
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 20/238 (8%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGILQDGT--VVAVKRLKDGNAI--GGEIQFQT 346
+ R+L++ ++ ++G+G FG V + + T V A+K L I F
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 347 EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
E ++++ A +++L+ +V YM G + + + + K
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYT 174
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG 466
A +L L IHRDVK N+LLD + DFG ++ + GT
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 234
Query: 467 HIAPEYLST----GQSSEKTDVFGFGILLLELITGQRAL-------EYGKAANQKGAM 513
+I+PE L + G + D + G+ L E++ G Y K N K ++
Sbjct: 235 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 292
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DF LA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 100
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 101 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 302 FSSKNILGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEIQFQT----EVEMISLAVH 356
+ + LG+G F VYK ++ +VA+K++K G+ + E++++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
N++ L + LV+ +M +L S K L +GL YLH+
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
I+HRD+K N+LLD+ + DFGLAK + V T + APE L
Sbjct: 132 W---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 477 Q-SSEKTDVFGFGILLLELI 495
+ D++ G +L EL+
Sbjct: 188 RMYGVGVDMWAVGCILAELL 207
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 48 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 106
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 107 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 163
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 164 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H +T V T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWMHY 207
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 41 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 99
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 100 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 156
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 157 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 20/238 (8%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGILQDGT--VVAVKRLKDGNAI--GGEIQFQT 346
+ R+L++ ++ ++G+G FG V + + T V A+K L I F
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 347 EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
E ++++ A +++L+ +V YM G + + + + K
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV----PEKWARFYT 179
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVG 466
A +L L IHRDVK N+LLD + DFG ++ + GT
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 467 HIAPEYLST----GQSSEKTDVFGFGILLLELITGQRAL-------EYGKAANQKGAM 513
+I+PE L + G + D + G+ L E++ G Y K N K ++
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 297
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 100
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 101 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H +T V T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWMHY 207
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 326 VVAVKRLKDGNAIGGE--IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGS 383
+++ ++ G+A + + +TE+E++ H ++++ F + +V M G
Sbjct: 42 IISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGE 100
Query: 384 VASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILL---DDCCEAV 440
+ ++ G L +T K + YLHE IIHRD+K N+LL ++ C
Sbjct: 101 LFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIK 157
Query: 441 VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITG 497
+ DFG +K+L ++ + + GT ++APE L T + D + G++L ++G
Sbjct: 158 ITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + FGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 151
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + DFGLA+ H +T V T + APE L+
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWMHY 207
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 282 VSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGE 341
V LG F+ + V +S +G GG V++ + + + A+K + A
Sbjct: 11 VDLGT-ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT 69
Query: 342 IQ-FQTEVEMIS-LAVHRN-LLRLYGFCMTPTERLLVYPYMSNGSV--ASRLKGKPILDW 396
+ ++ E+ ++ L H + ++RLY + +T +Y M G++ S LK K +D
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP 126
Query: 397 STRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
RK + +H+ I+H D+K AN L+ D ++ DFG+A + +
Sbjct: 127 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTS 182
Query: 457 VTTAVR-GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGQRALEYG 504
V + GTV ++ PE + SS + DV+ G +L + YG
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYG 235
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
K Q + I+Q KL ++D + + + I +++ V C + P R +
Sbjct: 236 KTPFQ--------QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
Query: 565 SEVV 568
E++
Sbjct: 288 PELL 291
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 36/230 (15%)
Query: 305 KNILGKGGFGIVYKGILQD---GTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
+ +L +GGF VY+ QD G A+KRL Q M L+ H N+++
Sbjct: 33 RRVLAEGGFAFVYEA--QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQ 90
Query: 362 LYGFCM----------TPTERLLVYPYMSNGSVASRLK---GKPILDWSTRKRIALGAAR 408
FC T L+ + G + LK + L T +I R
Sbjct: 91 ---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCR 147
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR------ 462
+ ++H Q P IIHRD+K N+LL + + DFG A + H + +A R
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEE 206
Query: 463 -----GTVGHIAPEYL---STGQSSEKTDVFGFGILLLELITGQRALEYG 504
T + PE + S EK D++ G +L L Q E G
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG 256
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + D GLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 301 NFSSKNILGKGGFGIVY--KGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHR 357
N+ +GKG F V + IL G VA+K + +Q EV ++ + H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 358 NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC 417
N+++L+ T L+ Y S G V L + +++ A R ++ + C
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYL----VAHGRMKEKEARSKFRQIVSAVQYC 127
Query: 418 DPK-IIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
K I+HRD+KA N+LLD + DFG + T G+ + APE L G
Sbjct: 128 HQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPE-LFQG 184
Query: 477 QSSE--KTDVFGFGILLLELITG 497
+ + + DV+ G++L L++G
Sbjct: 185 KKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + D GLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 149
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 205
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 146
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 147 DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 202
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG VYK ++ +A ++ + + + E+E+++ H +++L G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 368 TPTERLLVYPYMSNGSVAS------RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ ++ + G+V + R +P + R+ + L +LH + +I
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 138
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLA----KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
IHRD+KA N+L+ + + DFG++ K L +DS + T + E +
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 478 SSEKTDVFGFGILLLEL 494
K D++ GI L+E+
Sbjct: 199 YDYKADIWSLGITLIEM 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ CE + D GLA+ H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 150
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 151 DIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 206
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ C+ + DFGLA++ DH + T
Sbjct: 140 RGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 18/197 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG G FG VYK ++ +A ++ + + + E+E+++ H +++L G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 368 TPTERLLVYPYMSNGSVAS------RLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+ ++ + G+V + R +P + R+ + L +LH + +I
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSK---RI 130
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLA----KLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
IHRD+KA N+L+ + + DFG++ K L +DS + T + E +
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 478 SSEKTDVFGFGILLLEL 494
K D++ GI L+E+
Sbjct: 191 YDYKADIWSLGITLIEM 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 149
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 150 DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 205
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
RGL Y+H IIHRD+K +N+ +++ CE + DFGLA+ D + T T +
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 468 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 498
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 40/304 (13%)
Query: 282 VSLGNLRRFQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGE 341
V LG F+ + V +S +G GG V++ + + + A+K + A
Sbjct: 11 VDLGT-ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQT 69
Query: 342 IQ-FQTEVEMIS-LAVHRN-LLRLYGFCMTPTERLLVYPYMSNGSVA--SRLKGKPILDW 396
+ ++ E+ ++ L H + ++RLY + +T +Y M G++ S LK K +D
Sbjct: 70 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDP 126
Query: 397 STRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
RK + +H+ I+H D+K AN L+ D ++ DFG+A +
Sbjct: 127 WERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXX 182
Query: 457 VTTAVR-GTVGHIAPEYLSTGQSSEKT-----------DVFGFGILLLELITGQRALEYG 504
V + GTV ++ PE + SS + DV+ G +L + YG
Sbjct: 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY-------YMTYG 235
Query: 505 KAANQKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKM 564
K Q + I+Q KL ++D + + + I +++ V C + P R +
Sbjct: 236 KTPFQ--------QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISI 287
Query: 565 SEVV 568
E++
Sbjct: 288 PELL 291
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 53/296 (17%)
Query: 304 SKNILGKGGFG-IVYKGILQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMISLAVHRNLL 360
S+ ILG G G +V++G Q G VAVKR L D I EI+ TE + H N++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVI 90
Query: 361 RLYGFCMTPTERLL-VYPYMSNGSVASRLKGKPILDWSTRKR-----IAL--GAARGLLY 412
R Y C T+R L + + N ++ ++ K + D + + + I+L A G+ +
Sbjct: 91 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 413 LHEQCDPKIIHRDVKAANILLD-------------DCCEAVVGDFGLAKLLDHQDSHVTT 459
LH KIIHRD+K NIL+ + ++ DFGL K LD
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 460 AVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGQRALEYGKAANQKGAM 513
+ GT G APE L T D+F G + +++ + +G +++ +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRESNI 264
Query: 514 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ + + + K L +DR + E + + P RP +V+R
Sbjct: 265 IRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 182
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 201
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 200
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 173
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 97
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 157
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 158 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 214
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 215 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 187
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 201
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 290 FQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+++RE H + + LG+G FG V+ R+KD + FQ V+
Sbjct: 65 YEYRE---EVHWMTHQPRLGRGSFGEVH-------------RMKDK-----QTGFQCAVK 103
Query: 350 MISLAVHR-------------NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW 396
+ L V R ++ LYG + + GS+ +K L
Sbjct: 104 KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP- 162
Query: 397 STRKRIALGAA-RGLLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLL--DH 452
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 163 EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 219
Query: 453 QDSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 220 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 201
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 127/296 (42%), Gaps = 53/296 (17%)
Query: 304 SKNILGKGGFG-IVYKGILQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMISLAVHRNLL 360
S+ ILG G G +V++G Q G VAVKR L D I EI+ TE + H N++
Sbjct: 37 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVI 90
Query: 361 RLYGFCMTPTERLL-VYPYMSNGSVASRLKGKPILDWSTRKR-----IAL--GAARGLLY 412
R Y C T+R L + + N ++ ++ K + D + + + I+L A G+ +
Sbjct: 91 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 148
Query: 413 LHEQCDPKIIHRDVKAANILLD-------------DCCEAVVGDFGLAKLLDHQDSHVTT 459
LH KIIHRD+K NIL+ + ++ DFGL K LD
Sbjct: 149 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 460 AVR---GTVGHIAPEYLSTGQSSEKT---DVFGFGILLLELITGQRALEYGKAANQKGAM 513
+ GT G APE L T D+F G + +++ + +G +++ +
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSRESNI 264
Query: 514 LDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ + + + K L +DR + E + + P RP +V+R
Sbjct: 265 IRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 172
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 188
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 173
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSA--- 155
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGLA+ H D +T V T + APE L+
Sbjct: 156 DIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 211
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 104 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 215
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 112
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 172
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 173 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 229
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 230 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 200
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 89 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 200
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 90 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 201
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEV 348
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 81
Query: 349 EMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIAL 404
M + LL+ + RLL + + V + +P+ D + R +
Sbjct: 82 PMEVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQE 136
Query: 405 GAARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVT 458
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V
Sbjct: 137 ELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VY 193
Query: 459 TAVRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
T GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 241
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 76 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 187
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 188
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 28/232 (12%)
Query: 288 RRFQFRELQVATHNFSSKNILGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGE 341
++ + +E+ ++ F + LG+ FG VYKG L + VA+K LKD
Sbjct: 16 KQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLR 73
Query: 342 IQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRL------------- 388
+F+ E + + H N++ L G +++ Y S+G + L
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 389 ---KGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFG 445
K L+ + A G+ YL ++H+D+ N+L+ D + D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLG 190
Query: 446 LAKLLDHQDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
L + + D + + + +APE + G+ S +D++ +G++L E+ +
Sbjct: 191 LFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 61
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 62 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 173
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 96 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 207
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEY 503
GT + PE++ + ++ V+ GILL +++ G E+
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 21/224 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 109 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 220
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEY 503
GT + PE++ + ++ V+ GILL +++ G E+
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 77 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 188
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 128/300 (42%), Gaps = 57/300 (19%)
Query: 304 SKNILGKGGFG-IVYKGILQDGTVVAVKR-LKDGNAIG-GEIQFQTEVEMISLAVHRNLL 360
S+ ILG G G +V++G Q G VAVKR L D I EI+ TE + H N++
Sbjct: 19 SEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVI 72
Query: 361 RLYGFCMTPTERLL-VYPYMSNGSVASRLKGKPILDWSTRKR-----IAL--GAARGLLY 412
R Y C T+R L + + N ++ ++ K + D + + + I+L A G+ +
Sbjct: 73 RYY--CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH 130
Query: 413 LHEQCDPKIIHRDVKAANILLD-------------DCCEAVVGDFGLAKLLDHQDSHVTT 459
LH KIIHRD+K NIL+ + ++ DFGL K LD
Sbjct: 131 LHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 460 AVR---GTVGHIAPEYLSTGQS-------SEKTDVFGFGILLLELITGQRALEYGKAANQ 509
+ GT G APE L + + D+F G + +++ + +G ++
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH-PFGDKYSR 246
Query: 510 KGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVR 569
+ ++ + + + K L +DR + E + + P RP +V+R
Sbjct: 247 ESNIIRGIFSLDEMKCL-----------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G G +G V + G VAVK+L + +I + E+ ++ H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 366 CMTPTERL------LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP 419
TP L + ++ + + +K + + D + I RGL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLI-YQILRGLKYIHSA--- 144
Query: 420 KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPE-YLSTGQS 478
IIHRD+K +N+ +++ E + DFGL + H D +T V T + APE L+
Sbjct: 145 DIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEMTGYV-ATRWYRAPEIMLNWMHY 200
Query: 479 SEKTDVFGFGILLLELITGQ 498
++ D++ G ++ EL+TG+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 182
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 68
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 185
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 186 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG G FG+V++ + G A K + + E + E++ +S+ H L+ L+
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 117
Query: 367 MTPTERLLVYPYMSNGSVASRLKGK-PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
E +++Y +MS G + ++ + + +GL ++HE +H D
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLD 174
Query: 426 VKAANILL--DDCCEAVVGDFGLAKLLDHQDS-HVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K NI+ E + DFGL LD + S VTT GT APE T
Sbjct: 175 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYT 231
Query: 483 DVFGFGILLLELITG 497
D++ G+L L++G
Sbjct: 232 DMWSVGVLSYILLSG 246
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 21/226 (9%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEM 350
+E + + +LG GGFG VY GI + D VA+K + KD + GE+ T V M
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 60
Query: 351 ISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGA 406
+ LL+ + RLL + + V + +P+ D + R +
Sbjct: 61 EVV-----LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 407 ARGLLY-----LHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTA 460
AR + + + ++HRD+K NIL+D + E + DFG LL +D+ V T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTD 172
Query: 461 VRGTVGHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
GT + PE++ + ++ V+ GILL +++ G E+ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 15/198 (7%)
Query: 308 LGKGGFGIVYKGILQD-GTVVAVKRLKD---GNAIGGEIQFQTEVEMISLAVHRNLLRLY 363
LG+G F +V + I + G A K LK G EI + V ++ + R ++ L+
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR-VINLH 95
Query: 364 GFCMTPTERLLVYPYMSNGSVASRL--KGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
+E +L+ Y + G + S + ++ + R+ G+ YLH+ I
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NI 152
Query: 422 IHRDVKAANILLDDCC---EAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+H D+K NILL + + DFG+++ + H + + GT ++APE L+
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH--ACELREIMGTPEYLAPEILNYDPI 210
Query: 479 SEKTDVFGFGILLLELIT 496
+ TD++ GI+ L+T
Sbjct: 211 TTATDMWNIGIIAYMLLT 228
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 307 ILGKGGFGIVYKGI-LQDGTVVAVKRL-KDGNAIGGEIQFQTEVEMISLAVHRNLLRLYG 364
+LG GGFG VY GI + D VA+K + KD + GE+ T V M + LL+
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-----LLKKVS 65
Query: 365 FCMTPTERLLVYPYMSNGSVASRLKGKPILDW----STRKRIALGAARGLLY-----LHE 415
+ RLL + + V + +P+ D + R + AR + +
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 416 QCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLS 474
+ ++HRD+K NIL+D + E + DFG LL +D+ V T GT + PE++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDT-VYTDFDGTRVYSPPEWIR 182
Query: 475 TGQSSEKT-DVFGFGILLLELITGQRALEYGK 505
+ ++ V+ GILL +++ G E+ +
Sbjct: 183 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G G FG+ Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+TPT +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 427 KAANILLD--DCCEAVVGDFGLAK--LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
K N LLD + FG +K +L Q + GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQ----PKSTVGTPAYIAPEVLLKKEYDGKV 197
Query: 483 -DVFGFGILLLELITGQRALE 502
DV+ G+ L ++ G E
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFE 218
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 83/201 (41%), Gaps = 15/201 (7%)
Query: 308 LGKGGFGIV-YKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
+G G FG+ Q +VAVK ++ G I ++ + + SL H N++R
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLR-HPNIVRFKEVI 84
Query: 367 MTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDV 426
+TPT +V Y S G + R+ + G+ Y H ++ HRD+
Sbjct: 85 LTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM---QVCHRDL 141
Query: 427 KAANILLD--DCCEAVVGDFGLAK--LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
K N LLD + FG +K +L Q GT +IAPE L + K
Sbjct: 142 KLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTV----GTPAYIAPEVLLKKEYDGKV 197
Query: 483 -DVFGFGILLLELITGQRALE 502
DV+ G+ L ++ G E
Sbjct: 198 ADVWSCGVTLYVMLVGAYPFE 218
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 308 LGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFC 366
LG G FG+V++ + G A K + + E + E++ +S+ H L+ L+
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 223
Query: 367 MTPTERLLVYPYMSNGSVASRLKGK-PILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
E +++Y +MS G + ++ + + +GL ++HE +H D
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLD 280
Query: 426 VKAANILL--DDCCEAVVGDFGLAKLLDHQDS-HVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K NI+ E + DFGL LD + S VTT GT APE T
Sbjct: 281 LKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVGYYT 337
Query: 483 DVFGFGILLLELITG 497
D++ G+L L++G
Sbjct: 338 DMWSVGVLSYILLSG 352
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 28/229 (12%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGIL------QDGTVVAVKRLKDGNAIGGEIQF 344
+ +E+ ++ F + LG+ FG VYKG L + VA+K LKD +F
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 345 QTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRL---------------- 388
+ E + + H N++ L G +++ Y S+G + L
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 389 KGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAK 448
K L+ + A G+ YL ++H+D+ N+L+ D + D GL +
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 449 LLDHQDSH-VTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIT 496
+ D + + + +APE + G+ S +D++ +G++L E+ +
Sbjct: 177 EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 290 FQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+++RE H + + +G+G FG V+ R+KD + FQ V+
Sbjct: 51 YEYRE---EVHWMTHQPRVGRGSFGEVH-------------RMKDK-----QTGFQCAVK 89
Query: 350 MISLAVHR-------------NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW 396
+ L V R ++ LYG + + GS+ +K L
Sbjct: 90 KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP- 148
Query: 397 STRKRIALGAA-RGLLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLL--DH 452
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 149 EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205
Query: 453 QDSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 308 LGKGGFGIVYKGILQDG-TVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G +G V+K ++ +VA+KR++ D + G E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ + LV+ + LD K +GL + H + ++HRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
+K N+L++ E + DFGLA+ +A T+ + P+ L + S D+
Sbjct: 127 LKPQNLLINRNGELKLADFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 485 FGFGILLLELITGQRALEYGKAANQK 510
+ G + EL R L G + +
Sbjct: 186 WSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 137 RGLKYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 94/227 (41%), Gaps = 44/227 (19%)
Query: 290 FQFRELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVE 349
+++RE H + + +G+G FG V+ R+KD + FQ V+
Sbjct: 67 YEYRE---EVHWMTHQPRVGRGSFGEVH-------------RMKDK-----QTGFQCAVK 105
Query: 350 MISLAVHR-------------NLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDW 396
+ L V R ++ LYG + + GS+ +K L
Sbjct: 106 KVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLP- 164
Query: 397 STRKRIALGAA-RGLLYLHEQCDPKIIHRDVKAANILLD-DCCEAVVGDFGLAKLL--DH 452
R LG A GL YLH + +I+H DVKA N+LL D A + DFG A L D
Sbjct: 165 EDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 221
Query: 453 QDSHVTTA--VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ T + GT H+APE + K D++ ++L ++ G
Sbjct: 222 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 365 FCMTPTERLLVYPYMSNGSV--ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 80 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIV 133
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + GTV ++ PE + SS +
Sbjct: 134 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 192
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 193 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 237
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 238 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 365 FCMTPTERLLVYPYMSNGSVA--SRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + GTV ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 307 ILGKGGFGIVYKG-ILQDGTVVAVKRLKDGNAIG-----GEIQFQTEVEMI----SLAVH 356
+LGKGGFG V+ G L D VA+K + +G + EV ++ + H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 357 RNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRK-RIALGAAR----GLL 411
++RL + T +LV + L + + D+ T K + G +R ++
Sbjct: 98 PGVIRLLDWFETQEGFMLV--------LERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV 149
Query: 412 YLHEQCDPK-IIHRDVKAANILLD---DCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
+ C + ++HRD+K NIL+D C + + DFG LL H + + T GT +
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI--DFGSGALL-HDEPY--TDFDGTRVY 204
Query: 468 IAPEYLSTGQ-SSEKTDVFGFGILLLELITGQRALE 502
PE++S Q + V+ GILL +++ G E
Sbjct: 205 SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFE 240
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 92/204 (45%), Gaps = 10/204 (4%)
Query: 302 FSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+++ + +G+G +G+V V VA+K++ + E++++ H N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL---GAARGLLYLHEQC 417
+ PT + Y+ + + L + I RGL Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA- 147
Query: 418 DPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAPEYLST 475
++HRD+K +N+LL+ + + DFGLA++ DH + T T + APE +
Sbjct: 148 --NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 476 GQSSEKT-DVFGFGILLLELITGQ 498
+ K+ D++ G +L E+++ +
Sbjct: 206 SKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 28/214 (13%)
Query: 304 SKNILGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+ +LG+G + V + LQ+G AVK ++ F+ + ++N+L L
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
F T LV+ + GS+ + ++ + + R+ A L +LH + I
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIA 133
Query: 423 HRDVKAANILLDDCCEA-------VVGDFGLAKLLDHQDS-------HVTTAVRGTVGHI 468
HRD+K NIL CE+ + DF L + +S +TT G+ ++
Sbjct: 134 HRDLKPENIL----CESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYM 188
Query: 469 APEYLS--TGQSS---EKTDVFGFGILLLELITG 497
APE + T Q++ ++ D++ G++L +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
+ A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V
Sbjct: 197 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKK 519
R + +APE + + ++DV+ FG+LL E+ + A+ G +D + ++
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG-------ASPYPGVKIDEEFCRR 306
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ + ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 307 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGK 391
L G C P L+V + G++++ L+ K
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 119
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
+ A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V
Sbjct: 199 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKK 519
R + +APE + + ++DV+ FG+LL E+ + A+ G +D + ++
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 308
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ + ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 309 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGK 391
L G C P L+V + G++++ L+ K
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 121
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
+ A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V
Sbjct: 204 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKK 519
R + +APE + + ++DV+ FG+LL E+ + A+ G +D + ++
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 313
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ + ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 314 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGK 391
L G C P L+V + G++++ L+ K
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 126
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 365 FCMTPTERLLVYPYMSNGSV--ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 76 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIV 129
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + GTV ++ PE + SS +
Sbjct: 130 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 188
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 189 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 233
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 234 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 139 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 8/98 (8%)
Query: 401 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA 460
+IA+ + L +LH + +IHRDVK +N+L++ + + DFG++ L DS T
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 461 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 494
G ++APE L+ S K+D++ GI ++EL
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 302 FSSKNILGKGGFGIVYKGILQDGTV-VAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+++ + +G+G +G+V V VA+K++ + E++++ H N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA--------LGAARGLLY 412
+ PT M + + + L G + + ++ RGL Y
Sbjct: 105 GINDIIRAPTIE-----QMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 159
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTVGHIAP 470
+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T + AP
Sbjct: 160 IHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 471 EYLSTGQSSEKT-DVFGFGILLLELITGQ 498
E + + K+ D++ G +L E+++ +
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLL--DHQDSHVTTAVRGTV 465
RGL Y+H ++HRD+K +N+LL+ + + DFGLA++ DH + T T
Sbjct: 135 RGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 466 GHIAPEYLSTGQSSEKT-DVFGFGILLLELITGQ 498
+ APE + + K+ D++ G +L E+++ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 403 ALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA-V 461
+ A+G+ +L + K IHRD+ A NILL + + DFGLA+ + +V
Sbjct: 206 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLD--WVKK 519
R + +APE + + ++DV+ FG+LL E+ + A+ G +D + ++
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS-------LGASPYPGVKIDEEFCRR 315
Query: 520 IHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRML 571
+ + ++ +Y EM Q L C P+ RP SE+V L
Sbjct: 316 LKEGTRMRA-------PDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Query: 308 LGKGGFGIVYK----GILQDGT--VVAVKRLKDGNAIGGEIQFQTEVE-MISLAVHRNLL 360
LG+G FG V + GI + T VAVK LK+G +E++ +I + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 361 RLYGFCMTPTERLLV-YPYMSNGSVASRLKGK 391
L G C P L+V + G++++ L+ K
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK 128
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 365 FCMTPTERLLVYPYMSNGSV--ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 77 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 130
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + GTV ++ PE + SS +
Sbjct: 131 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 190 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 234
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 235 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 120/278 (43%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 365 FCMTPTERLLVYPYMSNGSV--ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + GTV ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
LGKG F +V + + + G A K + + Q + E + L H N++RL+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
L++ ++ G + + + + +L+ H+ ++HRD
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRD 146
Query: 426 VKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K N+LL + + DFGLA ++ + GT G+++PE L +
Sbjct: 147 LKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPV 205
Query: 483 DVFGFGILLLELITG 497
D++ G++L L+ G
Sbjct: 206 DLWACGVILYILLVG 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 302 FSSKNILGKGGFGIVYKGILQDGTVVAVKR-LKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
+++ ++G G FG+V++ L + VA+K+ L+D E+Q ++ + H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ------IMRIVKHPNVV 95
Query: 361 RLYGFCMTPTERL------LVYPYMSNGSV-ASR--LKGKPILDWSTRKRIALGAARGLL 411
L F + ++ LV Y+ ASR K K + K R L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCCEAV-VGDFGLAKLLDHQDSHVTTAVRGTVGHIAP 470
Y+H I HRD+K N+LLD + + DFG AK+L + +V+ + + AP
Sbjct: 156 YIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC--SRYYRAP 210
Query: 471 EYL-STGQSSEKTDVFGFGILLLELITGQ 498
E + + D++ G ++ EL+ GQ
Sbjct: 211 ELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 101/256 (39%), Gaps = 58/256 (22%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAI-----GGEIQFQTEV 348
ELQ H K +G+G +G+V I + ++ + N I + +TEV
Sbjct: 23 ELQKKYH---LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 349 EMISLAVHRNLLRLYG-------FCMTPT--------ERLLVYPYMSNGSVASRLKGKPI 393
++ H N+ RLY C+ ++L V+ S G A + I
Sbjct: 80 RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139
Query: 394 ---------------------LDWSTRKRIALGAAR----GLLYLHEQCDPKIIHRDVKA 428
LD+ R+++ R L YLH Q I HRD+K
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKP 196
Query: 429 ANILL--DDCCEAVVGDFGLAK---LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSS--EK 481
N L + E + DFGL+K L++ + + T GT +APE L+T S K
Sbjct: 197 ENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256
Query: 482 TDVFGFGILLLELITG 497
D + G+LL L+ G
Sbjct: 257 CDAWSAGVLLHLLLMG 272
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 112/281 (39%), Gaps = 39/281 (13%)
Query: 291 QFRELQVATHNFSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQ-FQTE 347
+ +E+++ +F ++G+G F + + Q G V A+K + + + GE+ F+ E
Sbjct: 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREE 111
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAA 407
+++ R + +L+ LV Y G + + L +RI A
Sbjct: 112 RDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLS-------KFGERIPAEMA 164
Query: 408 RGLLYLHEQCDP-------KIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA 460
R YL E +HRD+K NILLD C + DFG L + +
Sbjct: 165 R--FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLV 222
Query: 461 VRGTVGHIAPEYLST-------GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAM 513
GT +++PE L G + D + G+ E+ GQ A G
Sbjct: 223 AVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYG-- 280
Query: 514 LDWVKKIHQEKKLEM-LVDKDLKNNYDRIELEEMVQVALLC 553
K +H ++ L + LVD+ + E + +Q LLC
Sbjct: 281 ----KIVHYKEHLSLPLVDEGVPE-----EARDFIQ-RLLC 311
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F +G G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V YM G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 26/185 (14%)
Query: 301 NFSSKNILGKGGFGIVYKGILQDGTV-VAVKR-------LKDGNAIGGEIQFQTE----- 347
N+ K+++G+G +G VY ++ VA+K+ L D I EI
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 348 -VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
+ + L + +LL+ + L + +++ + K L K I
Sbjct: 89 IIRLHDLIIPEDLLKF--------DELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD-HQDSHVTTAVRGTV 465
G ++HE IIHRD+K AN LL+ C + DFGLA+ ++ +D H+ +
Sbjct: 141 LLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 466 GHIAP 470
+ P
Sbjct: 198 ENEEP 202
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ D + T T +
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 468 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 498
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Query: 408 RGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGH 467
RGL Y+H IIHRD+K +N+ +++ E + DFGLA+ D + T T +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEE----MTGYVATRWY 194
Query: 468 IAPE-YLSTGQSSEKTDVFGFGILLLELITGQ 498
APE L+ ++ D++ G ++ EL+ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 308 LGKGGFGIVYKGILQDG-TVVAVKRLK-DGNAIGGEIQFQTEVEMISLAVHRNLLRLYGF 365
+G+G +G V+K ++ +VA+KR++ D + G E+ ++ H+N++RL+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
+ + LV+ + LD K +GL + H + ++HRD
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRD 126
Query: 426 VKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ-SSEKTDV 484
+K N+L++ E + +FGLA+ +A T+ + P+ L + S D+
Sbjct: 127 LKPQNLLINRNGELKLANFGLARAFGIP-VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185
Query: 485 FGFGILLLELITGQRALEYGKAANQK 510
+ G + EL R L G + +
Sbjct: 186 WSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F +G G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V YM G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 119/278 (42%), Gaps = 39/278 (14%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMIS-LAVHRN-LLRLYG 364
+G GG V++ + + + A+K + A + ++ E+ ++ L H + ++RLY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 365 FCMTPTERLLVYPYMSNGSV--ASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
+ +T +Y M G++ S LK K +D RK + +H+ I+
Sbjct: 124 YEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IV 177
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR-GTVGHIAPEYLSTGQSSEK 481
H D+K AN L+ D ++ DFG+A + + V + G V ++ PE + SS +
Sbjct: 178 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRE 236
Query: 482 T-----------DVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLV 530
DV+ G +L + YGK Q + I+Q KL ++
Sbjct: 237 NGKSKSKISPKSDVWSLGCILY-------YMTYGKTPFQ--------QIINQISKLHAII 281
Query: 531 DKDLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVV 568
D + + + I +++ V C + P R + E++
Sbjct: 282 DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 301 NFSSKNILGKGGFGIVY----KGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVH 356
N+ K+++G+G +G VY K ++ + V R+ + I E+ +++
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRIL--REITILNRLKS 84
Query: 357 RNLLRLYGFCMTPT----ERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLY 412
++RLY + + L + +++ + K L K I G +
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 413 LHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLD-HQDSHVTT 459
+HE IIHRD+K AN LL+ C V DFGLA+ ++ +D+++
Sbjct: 145 IHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + EI+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFGLAK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 114/280 (40%), Gaps = 34/280 (12%)
Query: 301 NFSSKNILGKGGFGIVYKGILQ-DGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
NF +K L + G ++KG Q + VV V +++D + F E + + H N+
Sbjct: 13 NFLTK--LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSR-DFNEECPRLRIFSHPNV 69
Query: 360 LRLYGFCMTPT--ERLLVYPYMSNGSVASRLKGKP--ILDWSTRKRIALGAARGLLYLHE 415
L + G C +P L+ + GS+ + L ++D S + AL ARG +LH
Sbjct: 70 LPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH- 128
Query: 416 QCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
+P I + + ++ +D+ A + D + S + +APE L
Sbjct: 129 TLEPLIPRHALNSRSVXIDEDXTARIS------XADVKFSFQSPGRXYAPAWVAPEALQK 182
Query: 476 ---GQSSEKTDVFGFGILLLELITGQRALEYGKAANQKGAMLDWVKKIHQEKKLEMLVDK 532
+ D + F +LL EL+T R + + +N +I + LE
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVT--REVPFADLSNX---------EIGXKVALE----- 226
Query: 533 DLKNNYDRIELEEMVQVALLCTQYLPAHRPKMSEVVRMLE 572
L+ + ++ +C PA RPK +V +LE
Sbjct: 227 GLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + EI+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFGLAK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 3 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 122 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 176
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 84/199 (42%), Gaps = 19/199 (9%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLK----DGNAIGGEIQFQTEVEMISLAVHRNLLRL 362
LG+G +G VYK I VA+KR++ + G I+ EV ++ HRN++ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR---EVSLLKELQHRNIIEL 98
Query: 363 YGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKII 422
L++ Y N + + P + K G+ + H + + +
Sbjct: 99 KSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCL 154
Query: 423 HRDVKAANILL--DDCCEAVV---GDFGLAKLLDHQDSHVTTAVRGTVGHIAPEY-LSTG 476
HRD+K N+LL D E V GDFGLA+ T + T+ + PE L +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEILLGSR 213
Query: 477 QSSEKTDVFGFGILLLELI 495
S D++ + E++
Sbjct: 214 HYSTSVDIWSIACIWAEML 232
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 17/199 (8%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LGKG F +V + G ++ K+L + + + E + L H N++R
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARD----HQKLEREARICRLLKHPNIVR 74
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ L++ ++ G + + + + +L+ H+ +
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GV 131
Query: 422 IHRDVKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+HR++K N+LL + + DFGLA ++ + GT G+++PE L
Sbjct: 132 VHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDPY 190
Query: 479 SEKTDVFGFGILLLELITG 497
+ D++ G++L L+ G
Sbjct: 191 GKPVDLWACGVILYILLVG 209
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 3 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 61
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 62 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 122 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 176
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 21/160 (13%)
Query: 347 EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
EV ++ H N+++LY F LV G + + + I
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLD----DCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
G YLH+ I+HRD+K N+LL+ D +V DFGL+ +H +
Sbjct: 114 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIV-DFGLS-------AHFEVGGK 162
Query: 463 -----GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +IAPE L + EK DV+ G++L L+ G
Sbjct: 163 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 306 NILGKGGFGIVYKGILQDG------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
++GKG F +V + I ++ +V V + + E + E + + H ++
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 90
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-D 418
+ L + +V+ +M + + + + + +A R +L C D
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 150
Query: 419 PKIIHRDVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
IIHRDVK +LL ++ +G FG+A L + V GT +APE +
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKR 209
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ DV+G G++L L++G
Sbjct: 210 EPYGKPVDVWGCGVILFILLSG 231
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 306 NILGKGGFGIVYKGILQDG------TVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNL 359
++GKG F +V + I ++ +V V + + E + E + + H ++
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHI 88
Query: 360 LRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQC-D 418
+ L + +V+ +M + + + + + +A R +L C D
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148
Query: 419 PKIIHRDVKAANILL---DDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST 475
IIHRDVK +LL ++ +G FG+A L + V GT +APE +
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGTPHFMAPEVVKR 207
Query: 476 GQSSEKTDVFGFGILLLELITG 497
+ DV+G G++L L++G
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
LGKG F +V + + + G A K + + Q + E + L H N++RL+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
LV+ ++ G + + + + + + H I+HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN---GIVHRD 128
Query: 426 VKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K N+LL + + DFGLA + D GT G+++PE L +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 483 DVFGFGILLLELITG 497
D++ G++L L+ G
Sbjct: 188 DMWACGVILYILLVG 202
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYKGILQDGT-------VVAVKRLKDGNAIGGEIQF 344
FR+ V H + LG G F IV K Q GT + +RL +
Sbjct: 5 FRQEDVEDH-YEMGEELGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEI 62
Query: 345 QTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIAL 404
+ EV ++ H N++ L+ T+ +L+ +S G + L K L +
Sbjct: 63 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK 122
Query: 405 GAARGLLYLHEQCDPKIIHRDVKAANILLDDCC----EAVVGDFGLAKLLDHQDSHVTTA 460
G+ YLH + +I H D+K NI+L D + DFG+A ++ +
Sbjct: 123 QILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KN 177
Query: 461 VRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ GT +APE ++ + D++ G++ L++G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 384 VASRLKGKPILDWSTRKR---------IALGAARGLLYLHEQCDPKIIHRDVKAANILLD 434
V +KG +LD R++ + + + YLH Q ++HRD+K +NIL
Sbjct: 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYV 150
Query: 435 DCC---EAV-VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGIL 490
D E++ + DFG AK L ++ + T T +APE L D++ G+L
Sbjct: 151 DESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVL 209
Query: 491 LLELITG 497
L ++TG
Sbjct: 210 LYTMLTG 216
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 146
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 147 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGY 201
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 202 NKAVDWWALGVLIYEMAAG 220
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 308 LGKGGFGIVYKGI-LQDGTVVAVKRLKDGNAIGGEIQ-FQTEVEMISLAVHRNLLRLYGF 365
LGKG F +V + + + G A K + + Q + E + L H N++RL+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 366 CMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKIIHRD 425
LV+ ++ G + + + + + + H I+HRD
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN---GIVHRD 128
Query: 426 VKAANILLDDCCEAV---VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKT 482
+K N+LL + + DFGLA + D GT G+++PE L +
Sbjct: 129 LKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPV 187
Query: 483 DVFGFGILLLELITG 497
D++ G++L L+ G
Sbjct: 188 DMWACGVILYILLVG 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G F IV K G+ + ++ + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 347 EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGA 406
EV ++ H N+++LY F LV G + + + I
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 407 ARGLLYLHEQCDPKIIHRDVKAANILLD----DCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
G YLH+ I+HRD+K N+LL+ D +V DFGL+ H + R
Sbjct: 131 LSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIV-DFGLSA---HFEVGGKMKER 183
Query: 463 -GTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +IAPE L + EK DV+ G++L L+ G
Sbjct: 184 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 84/199 (42%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 147
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D+ V DFG AK + + T + GT ++APE + +
Sbjct: 148 -DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 202
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 203 NKAVDWWALGVLIYEMAAG 221
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 66/158 (41%), Gaps = 13/158 (8%)
Query: 347 EVE-MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
E+E ++ H N++ L LV M G + ++ + +
Sbjct: 70 EIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD------CCEAVVGDFGLAKLLDHQDSHVTT 459
+ + YLH Q ++HRD+K +NIL D C + DFG AK L ++ + T
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLR--ICDFGFAKQLRAENGLLMT 184
Query: 460 AVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
T +APE L E D++ GILL ++ G
Sbjct: 185 PCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G F IV K G+ + ++ + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 412 YLHEQCDPKIIHRDVKAANILLDD------CCEAVVGDFGLAKLLDHQDSHVTTAVRGTV 465
YLH Q ++HRD+K +NIL D C + DFG AK L ++ + T T
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLR--ICDFGFAKQLRAENGLLMTPCY-TA 189
Query: 466 GHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+APE L E D++ GILL ++ G
Sbjct: 190 NFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 16/216 (7%)
Query: 292 FRELQVATHNFSSKNILGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQ 345
FR+ V + + + LG G F +V K G+ + +R K +
Sbjct: 4 FRQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE 62
Query: 346 TEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALG 405
EV ++ H N++ L+ T+ +L+ ++ G + L K L
Sbjct: 63 REVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 406 AARGLLYLHEQCDPKIIHRDVKAANILLDD----CCEAVVGDFGLAKLLDHQDSHVTTAV 461
G+ YLH +I H D+K NI+L D + DFGLA +D + +
Sbjct: 123 ILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF--KNI 177
Query: 462 RGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
GT +APE ++ + D++ G++ L++G
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F +G G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G F IV K G+ + ++ + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G F IV K G+ + ++ + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYK------GILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLR 361
LG G F IV K G+ + ++ + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 308 LGKGGFGIVYKGILQD-GTVVAVKRLKDGNAIGGEI-----QFQTEVEMISLAVHRNLLR 361
LG G F IV K + G A K +K + + + EV ++ +H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 362 LYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPKI 421
L+ T+ +L+ +S G + L K L G+ YLH + KI
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KI 136
Query: 422 IHRDVKAANILLDDCCEAV----VGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQ 477
H D+K NI+L D + + DFGLA + +D + GT +APE ++
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNIFGTPEFVAPEIVNYEP 194
Query: 478 SSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 195 LGLEADMWSIGVITYILLSG 214
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 401 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA 460
+IA+ + L +LH + +IHRDVK +N+L++ + + DFG++ L D
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDDVAKDI 168
Query: 461 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 494
G ++APE L+ S K+D++ GI ++EL
Sbjct: 169 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 98/224 (43%), Gaps = 28/224 (12%)
Query: 291 QFRELQVATHNFS------SKNILGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF +QVA F+ +G G GIV + +L G VAVK+L N
Sbjct: 7 QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTH 64
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ + +
Sbjct: 65 AKRAYR-ELVLLKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIHME-- 120
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 121 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--S 175
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+ + T T + APE + E D++ G ++ EL+ G
Sbjct: 176 TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 181
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + T + GT ++APE + +
Sbjct: 182 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGY 236
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 155
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 156 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 210
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 211 NKAVDWWALGVLIYEMAAG 229
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 153
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 154 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 208
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 209 NKAVDWWALGVLIYEMAAG 227
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + +++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ S + T T + APE +
Sbjct: 146 G---IIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 181
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 182 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 236
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 153
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 154 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 208
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 209 NKAVDWWALGVLIYEMAAG 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ ++ G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 99/243 (40%), Gaps = 33/243 (13%)
Query: 291 QFRELQVATHNFSSKNILGKGGFGIVYKGILQDG-TVVAVKRLKDGNAI--GGEIQFQTE 347
+ +++++ +F ++G+G FG V L++ V A+K L + F+ E
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREE 124
Query: 348 VEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVAS-------RLKGKPILDWSTRK 400
+++ + + L+ LV Y G + + RL + +
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 401 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFG-LAKLLDHQDSHVTT 459
IA+ + L Y +HRD+K NIL+D + DFG KL++ +
Sbjct: 185 VIAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV 235
Query: 460 AVRGTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRAL-------EYGKAA 507
AV GT +I+PE L G+ + D + G+ + E++ G+ YGK
Sbjct: 236 AV-GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
Query: 508 NQK 510
N K
Sbjct: 295 NHK 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIIISKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 308 LGKGGFGIVYKGILQDGT-------VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
LG G F IV K Q GT + +RL + + EV ++ H N++
Sbjct: 13 LGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
L+ T+ +L+ +S G + L K L + G+ YLH + +
Sbjct: 72 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---R 128
Query: 421 IIHRDVKAANILLDDCC----EAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
I H D+K NI+L D + DFG+A ++ + + GT +APE ++
Sbjct: 129 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYE 186
Query: 477 QSSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 187 PLGLEADMWSIGVITYILLSG 207
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + ++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ S + T T + APE +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + +++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G+++ E+I G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + +++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G+++ E+I G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y+ G + S L+ + A YLH
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 181
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 182 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 236
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 237 NKAVDWWALGVLIYEMAAG 255
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Query: 308 LGKGGFGIVYKGILQDGT-------VVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLL 360
LG G F IV K Q GT + +RL + + EV ++ H N++
Sbjct: 34 LGSGQFAIVRK-CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 361 RLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDPK 420
L+ T+ +L+ +S G + L K L + G+ YLH + +
Sbjct: 93 TLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---R 149
Query: 421 IIHRDVKAANILLDDCC----EAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
I H D+K NI+L D + DFG+A ++ + + GT +APE ++
Sbjct: 150 IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--KNIFGTPEFVAPEIVNYE 207
Query: 477 QSSEKTDVFGFGILLLELITG 497
+ D++ G++ L++G
Sbjct: 208 PLGLEADMWSIGVITYILLSG 228
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 89
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + ++ ++ + LD + G+ +LH
Sbjct: 90 LN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 146
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ S + T T + APE +
Sbjct: 147 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 201
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 30/115 (26%)
Query: 409 GLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDS------------- 455
G+ Y+H I+HRD+K AN L++ C V DFGLA+ +D+ ++
Sbjct: 168 GVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 456 -------HVTTAVRGTVGHI------APEYLSTGQS-SEKTDVFGFGILLLELIT 496
H R GH+ APE + ++ +E DV+ G + EL+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + ++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ S + T T + APE +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + ++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ S + T T + APE +
Sbjct: 146 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG--TSFMMTPEVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 91/201 (45%), Gaps = 25/201 (12%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
LG+G FGIV++ + + + ++ + E+ ++++A HRN+L L+
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE 71
Query: 368 TPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCDP-------K 420
+ E ++++ ++S + R+ + + R+ ++ Y+H+ C+
Sbjct: 72 SMEELVMIFEFISGLDIFERINTSA-FELNEREIVS--------YVHQVCEALQFLHSHN 122
Query: 421 IIHRDVKAANILLDDCCEAVVG--DFGLAKLLDHQDSH--VTTAVRGTVGHIAPEYLSTG 476
I H D++ NI+ + + +FG A+ L D+ + TA + APE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE----YYAPEVHQHD 178
Query: 477 QSSEKTDVFGFGILLLELITG 497
S TD++ G L+ L++G
Sbjct: 179 VVSTATDMWSLGTLVYVLLSG 199
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ ++ G
Sbjct: 216 NKAVDWWALGVLIYQMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 412 YLHEQCDPKIIHRDVKAANILLDDCC---EAV-VGDFGLAKLLDHQDSHVTTAVRGTVGH 467
YLH Q ++HRD+K +NIL D E++ + DFG AK L ++ + T T
Sbjct: 131 YLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANF 186
Query: 468 IAPEYLSTGQSSEKTDVFGFGILLLELITG 497
+APE L D++ G+LL +TG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT +APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEALAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L + L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 20/208 (9%)
Query: 308 LGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCM 367
+G+G +G VYK +DG LK G + E+ ++ H N++ L +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFL 88
Query: 368 TPTER--LLVYPYMSNG-------SVASRLKGKPI-LDWSTRKRIALGAARGLLYLHEQC 417
+ +R L++ Y + AS+ KP+ L K + G+ YLH
Sbjct: 89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW 148
Query: 418 DPKIIHRDVKAANILL----DDCCEAVVGDFGLAKLLDHQDSHVT--TAVRGTVGHIAPE 471
++HRD+K ANIL+ + + D G A+L + + V T + APE
Sbjct: 149 ---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPE 205
Query: 472 YLSTGQSSEKT-DVFGFGILLLELITGQ 498
L + K D++ G + EL+T +
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L + L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L + L +V Y+ G + S L+ + A YLH
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++APE + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 25/242 (10%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQT------- 346
EL ++ + + G +G V G+ +G VA+KR+ + + G + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 347 ---EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA 403
E+ +++ H N+L L + E P M + + L + +RI
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHDQRIV 130
Query: 404 LGAARG-------LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
+ LL LH + ++HRD+ NILL D + + DF LA+ D D++
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADAN 189
Query: 457 VTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
T V + APE + + K D++ G ++ E+ + NQ +++
Sbjct: 190 KTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 516 WV 517
V
Sbjct: 249 VV 250
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 98/242 (40%), Gaps = 25/242 (10%)
Query: 294 ELQVATHNFSSKNILGKGGFGIVYKGILQDGTVVAVKRLKDGNAIGGEIQFQT------- 346
EL ++ + + G +G V G+ +G VA+KR+ + + G + +
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 347 ---EVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKGKPILDWSTRKRIA 403
E+ +++ H N+L L + E P M + + L + +RI
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHDQRIV 130
Query: 404 LGAARG-------LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSH 456
+ LL LH + ++HRD+ NILL D + + DF LA+ D D++
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADAN 189
Query: 457 VTTAVRGTVGHIAPEYLSTGQSSEK-TDVFGFGILLLELITGQRALEYGKAANQKGAMLD 515
T V + APE + + K D++ G ++ E+ + NQ +++
Sbjct: 190 KTHYVTHR-WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 516 WV 517
V
Sbjct: 249 VV 250
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y G + S L+ + A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 161
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+++D V DFG AK + + T + GT ++APE + +
Sbjct: 162 -DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPEYLAPEIILSKGY 216
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ H+N++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGL 90
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + ++ ++ + LD + G+ +LH
Sbjct: 91 LN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQME--LDHERMSYLLYQMLCGIKHLHSA 147
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ C + DFGLA+ V V T + APE +
Sbjct: 148 ---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV--TRYYRAPEVILGM 202
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 410 LLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIA 469
L +LH Q ++H DVK ANI L +GDFGL L++ + G ++A
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMA 224
Query: 470 PEYLSTGQSSEKTDVFGFGILLLEL 494
PE L G DVF G+ +LE+
Sbjct: 225 PELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 10/199 (5%)
Query: 302 FSSKNILGKGGFG-IVYKGILQDGTVVAVKRLKDGNAIG-GEIQFQTEVEMISLAVHRNL 359
F LG G FG ++ + G A+K L + +I+ + I AV+
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 360 LRLYGFCMTPTERL-LVYPYMSNGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQCD 418
L F L +V Y++ G + S L+ + A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL-- 160
Query: 419 PKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQS 478
+I+RD+K N+L+D V DFG AK + + T + GT ++AP + +
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPAIILSKGY 215
Query: 479 SEKTDVFGFGILLLELITG 497
++ D + G+L+ E+ G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 401 RIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTA 460
+IA+ + L +LH + +IHRDVK +N+L++ + DFG++ L D
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL--VDDVAKDI 195
Query: 461 VRGTVGHIAPEY----LSTGQSSEKTDVFGFGILLLEL 494
G + APE L+ S K+D++ GI +EL
Sbjct: 196 DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + +++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLVGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 113 IPAEIGRLTKLQTLDLSNNFFTGEIPSSLGHLRSLQYMRFNNNSLSGAFPTSL-ASMTQL 171
+PA I T Q L L+NN T P HL +LQ + FN+N L+ A PT + +TQL
Sbjct: 27 VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQL 83
Query: 172 IFLDLSYNNLSGPVPR 187
LDL+ N+L +PR
Sbjct: 84 TQLDLNDNHLKS-IPR 98
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 47 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 104
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 105 AKRAYR-ELVLMKCVNHKNIISLLNV-FTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 160
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 215
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 423 HRDVKAANILLDDCCEAVVGDFGLAK-LLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEK 481
HRDVK NIL+ A + DFG+A D + + + V GT+ + APE S ++ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 482 TDVFGFGILLLELITG 497
D++ +L E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 8 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 65
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 66 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 121
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 122 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 176
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 177 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 308 LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIGGEIQFQTEVEMISLAVHRNLLRL 362
+G G GIV Y IL+ VA+K+L N + ++ E+ ++ + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGL 88
Query: 363 YGFCMTPTERLL----VYPYMS--NGSVASRLKGKPILDWSTRKRIALGAARGLLYLHEQ 416
TP + L VY M + +++ ++ + LD + G+ +LH
Sbjct: 89 LN-VFTPQKSLEEFQDVYIVMELMDANLSQVIQME--LDHERMSYLLYQMLCGIKHLHSA 145
Query: 417 CDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTG 476
IIHRD+K +NI++ + DFGLA+ S + T T + APE +
Sbjct: 146 G---IIHRDLKPSNIVVKSDATLKILDFGLARTAG--TSFMMTPYVVTRYYRAPEVILGM 200
Query: 477 QSSEKTDVFGFGILLLELITG 497
E D++ G ++ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 67
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 68 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 123
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 67 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 122
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 9 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 66
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 67 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 122
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 177
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 178 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 47 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 104
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 105 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 160
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 161 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 215
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 10 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 67
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 68 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 123
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 178
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 422 IHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLST-----G 476
+HRD+K N+LLD + DFG ++ + ++ GT +I+PE L G
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 477 QSSEKTDVFGFGILLLELITGQRAL-------EYGKAANQK 510
+ + D + G+ + E++ G+ YGK N +
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 313
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 31/240 (12%)
Query: 293 RELQVATHNFSSKNILGKGGFGIVYKGILQDGT-VVAVKRLKDGNAI--GGEIQFQTEVE 349
+E+Q+ +F ++G+G FG V +++ + A+K L + F+ E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 350 MISLAVHRNLLRLYGFCMTPTERLLVYPYMSNG---SVASRLKGKPILDWSTRKRIALG- 405
++ + + L+ LV Y G ++ S+ + K D + R +G
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMA---RFYIGE 183
Query: 406 ---AARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQDSHVTTAVR 462
A + LH +HRD+K N+LLD + DFG ++ + ++
Sbjct: 184 MVLAIDSIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 463 GTVGHIAPEYLST-----GQSSEKTDVFGFGILLLELITGQRAL-------EYGKAANQK 510
GT +I+PE L G+ + D + G+ + E++ G+ YGK N +
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE 297
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 60
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 61 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 116
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 3 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 60
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 61 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 116
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 171
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 172 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 291 QFRELQVATHNFS----SKNI--LGKGGFGIV---YKGILQDGTVVAVKRLKD--GNAIG 339
QF ++V F+ +N+ +G G GIV Y +L VA+K+L N
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTH 59
Query: 340 GEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLL----VYPYMS--NGSVASRLKGKPI 393
+ ++ E+ ++ H+N++ L TP + L VY M + ++ ++ +
Sbjct: 60 AKRAYR-ELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQME-- 115
Query: 394 LDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDCCEAVVGDFGLAKLLDHQ 453
LD + G+ +LH IIHRD+K +NI++ C + DFGLA+
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG-- 170
Query: 454 DSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELI 495
S + T T + APE + E D++ G ++ E++
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,502,070
Number of Sequences: 62578
Number of extensions: 696154
Number of successful extensions: 3938
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 381
Number of HSP's that attempted gapping in prelim test: 1606
Number of HSP's gapped (non-prelim): 1278
length of query: 622
length of database: 14,973,337
effective HSP length: 105
effective length of query: 517
effective length of database: 8,402,647
effective search space: 4344168499
effective search space used: 4344168499
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)