Query 036229
Match_columns 982
No_of_seqs 1102 out of 6888
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 18:24:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-92 6.5E-97 876.9 46.1 666 31-716 5-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 9.4E-73 3.2E-77 700.4 36.1 586 81-680 100-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 7.1E-66 2.4E-70 633.1 43.2 594 86-689 9-633 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 9.5E-63 3.3E-67 605.3 43.8 571 81-658 25-626 (680)
5 3j0a_A TOLL-like receptor 5; m 100.0 5.6E-59 1.9E-63 582.9 39.3 534 85-684 8-566 (844)
6 3t6q_A CD180 antigen; protein- 100.0 5.6E-59 1.9E-63 564.1 37.8 536 85-683 16-565 (606)
7 4eco_A Uncharacterized protein 100.0 7.8E-60 2.7E-64 571.2 25.3 504 34-654 26-600 (636)
8 3vq2_A TLR4, TOLL-like recepto 100.0 2.5E-58 8.6E-63 558.3 33.4 535 85-684 15-564 (606)
9 3t6q_A CD180 antigen; protein- 100.0 2.9E-58 9.8E-63 557.8 32.2 516 82-658 34-564 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 1.3E-58 4.5E-63 568.2 27.6 517 32-678 263-864 (876)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.8E-56 6.1E-61 542.1 30.7 512 81-658 32-562 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.3E-55 7.7E-60 550.3 39.4 534 108-705 7-564 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 1.1E-53 3.7E-58 511.4 28.8 502 68-684 3-516 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 7.1E-53 2.4E-57 506.9 29.2 537 107-705 9-560 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 6.7E-52 2.3E-56 498.4 28.5 513 86-659 12-536 (570)
16 4eco_A Uncharacterized protein 100.0 2.2E-52 7.5E-57 506.0 17.0 508 35-680 24-602 (636)
17 4g8a_A TOLL-like receptor 4; l 100.0 2.3E-49 7.9E-54 482.8 35.3 559 58-683 12-585 (635)
18 2z7x_B TOLL-like receptor 1, v 100.0 3.6E-50 1.2E-54 477.3 22.9 458 132-683 3-486 (520)
19 2z81_A CD282 antigen, TOLL-lik 100.0 3.8E-49 1.3E-53 472.0 27.0 486 159-705 11-514 (549)
20 2z7x_B TOLL-like receptor 1, v 100.0 2.9E-49 9.8E-54 469.6 21.8 462 84-634 3-485 (520)
21 4ecn_A Leucine-rich repeat pro 100.0 3.2E-48 1.1E-52 476.1 29.0 460 105-681 323-843 (876)
22 4g8a_A TOLL-like receptor 4; l 100.0 7E-47 2.4E-51 460.8 31.0 537 109-705 35-584 (635)
23 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.8E-47 2E-51 453.6 25.3 461 130-684 32-516 (562)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.1E-46 1E-50 447.3 20.7 464 84-634 34-514 (562)
25 1ogq_A PGIP-2, polygalacturona 100.0 1.9E-44 6.5E-49 397.5 22.2 293 34-333 2-302 (313)
26 1jl5_A Outer protein YOPM; leu 100.0 3.1E-43 1.1E-47 407.1 25.1 404 177-684 10-417 (454)
27 1jl5_A Outer protein YOPM; leu 100.0 1.7E-43 5.7E-48 409.4 21.3 423 102-684 8-435 (454)
28 3v47_A TOLL-like receptor 5B a 100.0 3E-42 1E-46 402.1 23.7 215 67-320 6-234 (455)
29 3v47_A TOLL-like receptor 5B a 100.0 7E-42 2.4E-46 399.0 25.5 396 60-539 8-412 (455)
30 3bz5_A Internalin-J, INLJ; leu 100.0 1.4E-39 4.7E-44 377.0 24.5 357 124-612 37-393 (457)
31 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-40 1E-44 356.1 10.4 195 780-979 32-230 (311)
32 2id5_A Lingo-1, leucine rich r 100.0 8.8E-39 3E-43 374.9 23.1 328 347-705 32-360 (477)
33 1o6v_A Internalin A; bacterial 100.0 8.7E-38 3E-42 364.8 31.3 346 249-680 45-390 (466)
34 3bz5_A Internalin-J, INLJ; leu 100.0 2.4E-38 8.3E-43 366.5 24.8 362 239-684 31-393 (457)
35 4fih_A Serine/threonine-protei 100.0 9.8E-40 3.3E-44 357.5 10.8 192 780-979 74-266 (346)
36 1o6v_A Internalin A; bacterial 100.0 1.7E-37 5.7E-42 362.5 29.4 351 223-660 43-393 (466)
37 4asz_A BDNF/NT-3 growth factor 100.0 8.4E-40 2.9E-44 354.0 7.4 189 780-974 13-219 (299)
38 4aoj_A High affinity nerve gro 100.0 3.5E-39 1.2E-43 354.1 10.5 189 780-974 41-249 (329)
39 4b9d_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 357.3 6.6 193 779-979 23-221 (350)
40 3omv_A RAF proto-oncogene seri 100.0 3.5E-39 1.2E-43 348.9 9.6 190 778-973 34-225 (307)
41 4fie_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 359.5 12.3 193 779-979 150-343 (423)
42 3hyh_A Carbon catabolite-derep 100.0 8.6E-39 2.9E-43 340.1 8.1 193 779-979 12-208 (275)
43 4gt4_A Tyrosine-protein kinase 100.0 1.4E-38 4.8E-43 345.9 8.4 190 780-975 26-237 (308)
44 3ubd_A Ribosomal protein S6 ki 100.0 6.7E-39 2.3E-43 345.7 4.2 191 780-979 24-222 (304)
45 2id5_A Lingo-1, leucine rich r 100.0 8.5E-37 2.9E-41 358.1 21.7 319 157-559 15-333 (477)
46 4g3f_A NF-kappa-beta-inducing 100.0 4.1E-38 1.4E-42 343.6 8.7 189 779-979 57-252 (336)
47 4g31_A Eukaryotic translation 100.0 1.2E-37 4.3E-42 337.7 9.0 189 780-974 5-219 (299)
48 1ogq_A PGIP-2, polygalacturona 100.0 2.1E-36 7.1E-41 333.3 17.8 258 450-712 50-312 (313)
49 3fpq_A Serine/threonine-protei 100.0 2.3E-37 7.7E-42 332.3 9.5 185 783-979 29-225 (290)
50 4fcg_A Uncharacterized protein 100.0 2.2E-36 7.4E-41 335.1 15.9 272 33-310 22-313 (328)
51 4ase_A Vascular endothelial gr 100.0 3.7E-37 1.3E-41 340.6 9.6 199 770-974 54-276 (353)
52 3o6n_A APL1; leucine-rich repe 100.0 1.6E-35 5.6E-40 337.5 21.8 346 59-438 3-353 (390)
53 3o6n_A APL1; leucine-rich repe 100.0 2.9E-35 9.8E-40 335.5 23.1 194 497-705 185-378 (390)
54 3oja_B Anopheles plasmodium-re 100.0 2.8E-35 9.6E-40 354.2 23.2 194 497-705 191-384 (597)
55 3hmm_A TGF-beta receptor type- 100.0 1.8E-36 6.1E-41 330.4 8.9 188 780-974 3-207 (303)
56 3oja_B Anopheles plasmodium-re 100.0 7.9E-35 2.7E-39 350.2 24.1 349 57-464 7-359 (597)
57 4fmz_A Internalin; leucine ric 100.0 7.4E-34 2.5E-38 318.5 25.4 306 319-678 41-346 (347)
58 4f9c_A Cell division cycle 7-r 100.0 1.6E-35 5.3E-40 330.2 8.9 196 777-982 18-248 (361)
59 3v5w_A G-protein coupled recep 100.0 3.9E-35 1.3E-39 343.2 10.1 194 779-981 188-391 (689)
60 4b99_A Mitogen-activated prote 100.0 3.1E-35 1.1E-39 331.1 8.3 195 779-979 53-259 (398)
61 4fmz_A Internalin; leucine ric 100.0 6.5E-33 2.2E-37 310.8 27.1 306 271-654 41-346 (347)
62 3uto_A Twitchin; kinase, muscl 100.0 4.2E-34 1.4E-38 338.2 12.3 185 779-972 156-343 (573)
63 1z7x_W Ribonuclease inhibitor; 100.0 6.4E-36 2.2E-40 349.2 -7.6 262 105-386 3-299 (461)
64 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-32 1.1E-36 303.0 22.2 242 84-337 36-279 (332)
65 1xku_A Decorin; proteoglycan, 100.0 3.1E-32 1.1E-36 302.9 21.4 240 85-335 35-276 (330)
66 2ft3_A Biglycan; proteoglycan, 100.0 1.5E-31 5.1E-36 297.6 25.5 268 347-676 54-331 (332)
67 1xku_A Decorin; proteoglycan, 100.0 3.2E-31 1.1E-35 294.7 25.4 269 347-676 52-330 (330)
68 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-34 5.2E-39 337.5 -6.6 110 178-287 3-126 (461)
69 4aw2_A Serine/threonine-protei 100.0 5.8E-33 2E-37 318.0 6.1 180 772-955 66-249 (437)
70 2z80_A TOLL-like receptor 2, v 100.0 1.7E-31 5.8E-36 299.9 16.3 285 62-386 23-316 (353)
71 2z66_A Variable lymphocyte rec 100.0 3.2E-31 1.1E-35 291.4 13.3 250 69-336 7-262 (306)
72 3ogk_B Coronatine-insensitive 100.0 2.3E-33 7.7E-38 338.6 -4.6 256 68-330 41-326 (592)
73 3fxz_A Serine/threonine-protei 100.0 5.8E-31 2E-35 287.8 13.4 186 778-973 18-204 (297)
74 1o6l_A RAC-beta serine/threoni 100.0 4.3E-31 1.5E-35 293.1 11.6 185 779-972 4-192 (337)
75 3fe3_A MAP/microtubule affinit 100.0 2.1E-31 7.2E-36 294.9 8.9 186 778-972 13-201 (328)
76 2vd5_A DMPK protein; serine/th 100.0 2.9E-31 1E-35 301.8 10.3 180 772-955 53-236 (412)
77 3v8s_A RHO-associated protein 100.0 2.7E-31 9.4E-36 301.8 9.4 179 774-958 63-245 (410)
78 3s95_A LIMK-1, LIM domain kina 100.0 6.8E-31 2.3E-35 289.4 11.8 190 779-974 9-211 (310)
79 2qkw_B Protein kinase; three-h 100.0 1.8E-31 6.3E-36 295.5 7.1 198 770-973 29-229 (321)
80 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.1E-31 1.4E-35 295.3 8.2 194 778-978 21-219 (353)
81 2c30_A Serine/threonine-protei 100.0 2E-30 7E-35 286.7 13.6 196 768-973 23-229 (321)
82 3zgw_A Maternal embryonic leuc 100.0 5.7E-31 1.9E-35 293.0 8.8 189 778-973 8-198 (347)
83 4dc2_A Protein kinase C IOTA t 100.0 6.6E-31 2.3E-35 296.9 9.5 193 779-978 51-248 (396)
84 4fr4_A YANK1, serine/threonine 100.0 1E-30 3.5E-35 294.5 10.6 171 779-956 14-188 (384)
85 3uim_A Brassinosteroid insensi 100.0 8.7E-31 3E-35 290.8 9.8 202 765-973 15-223 (326)
86 2yab_A Death-associated protei 100.0 2.3E-30 7.8E-35 290.0 13.0 185 778-972 10-205 (361)
87 1xjd_A Protein kinase C, theta 100.0 1.1E-30 3.7E-35 290.7 10.1 188 776-972 13-205 (345)
88 2z66_A Variable lymphocyte rec 100.0 3E-30 1E-34 283.6 13.5 273 427-705 10-291 (306)
89 2psq_A Fibroblast growth facto 100.0 9.9E-31 3.4E-35 294.9 9.8 189 779-973 80-293 (370)
90 3zyi_A Leucine-rich repeat-con 100.0 2.8E-29 9.5E-34 291.7 22.0 250 426-682 56-307 (452)
91 1tki_A Titin; serine kinase, m 100.0 2.6E-30 8.9E-35 285.6 12.6 185 779-973 4-191 (321)
92 3tki_A Serine/threonine-protei 100.0 8.5E-31 2.9E-35 289.9 8.7 188 779-972 6-195 (323)
93 3kul_A Ephrin type-A receptor 100.0 2.1E-30 7.3E-35 287.0 11.6 190 779-974 48-243 (325)
94 1fot_A TPK1 delta, CAMP-depend 100.0 2E-30 6.8E-35 285.7 11.2 182 779-972 5-190 (318)
95 3zyj_A Leucine-rich repeat-con 100.0 1.7E-29 5.8E-34 292.3 18.7 244 86-335 48-292 (440)
96 4fcg_A Uncharacterized protein 100.0 2.2E-29 7.6E-34 278.7 18.8 224 451-678 82-314 (328)
97 2i0e_A Protein kinase C-beta I 100.0 2.1E-30 7.2E-35 289.3 10.5 186 778-972 18-208 (353)
98 1wwl_A Monocyte differentiatio 100.0 1.1E-30 3.6E-35 287.7 8.0 247 104-385 42-310 (312)
99 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-30 4.3E-35 294.2 8.7 193 778-979 63-281 (365)
100 3zyj_A Leucine-rich repeat-con 100.0 4.8E-29 1.6E-33 288.6 22.0 250 426-682 45-296 (440)
101 1wwl_A Monocyte differentiatio 100.0 2.5E-31 8.7E-36 292.7 2.5 266 59-335 21-309 (312)
102 3niz_A Rhodanese family protei 100.0 1.9E-30 6.4E-35 285.7 9.3 186 778-972 19-207 (311)
103 3zyi_A Leucine-rich repeat-con 100.0 2E-29 6.8E-34 292.9 18.5 245 85-335 58-303 (452)
104 3a8x_A Protein kinase C IOTA t 100.0 2.2E-30 7.4E-35 288.9 9.4 185 779-972 8-197 (345)
105 1kob_A Twitchin; kinase, intra 100.0 5.9E-30 2E-34 289.3 12.8 185 779-972 50-237 (387)
106 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-30 6.3E-35 293.8 8.4 192 778-975 112-305 (377)
107 2z80_A TOLL-like receptor 2, v 100.0 1.8E-29 6.3E-34 283.3 16.4 278 350-683 34-319 (353)
108 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.7E-30 1.3E-34 287.4 10.6 182 779-972 40-225 (350)
109 2zv2_A Calcium/calmodulin-depe 100.0 5.9E-30 2E-34 280.2 11.4 188 779-973 12-228 (298)
110 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.5E-30 2.9E-34 274.3 12.3 189 778-974 6-194 (268)
111 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.7E-30 9.2E-35 286.4 8.2 185 779-973 8-196 (336)
112 4eqm_A Protein kinase; transfe 100.0 4.8E-30 1.7E-34 280.1 10.0 187 779-973 10-200 (294)
113 3ogk_B Coronatine-insensitive 100.0 4.2E-31 1.4E-35 318.7 1.5 407 120-583 64-527 (592)
114 3c0i_A Peripheral plasma membr 100.0 3.9E-30 1.3E-34 288.1 9.2 186 779-972 23-220 (351)
115 3p86_A Serine/threonine-protei 100.0 4.7E-30 1.6E-34 282.0 9.6 191 774-973 31-227 (309)
116 3vhe_A Vascular endothelial gr 100.0 2.2E-30 7.6E-35 291.7 7.2 200 768-973 10-283 (359)
117 3soa_A Calcium/calmodulin-depe 100.0 6.5E-30 2.2E-34 293.9 11.0 188 777-973 8-201 (444)
118 3a62_A Ribosomal protein S6 ki 100.0 4.7E-30 1.6E-34 284.6 9.4 186 779-973 16-209 (327)
119 2bdw_A Hypothetical protein K1 100.0 6.9E-30 2.4E-34 287.0 10.8 185 778-972 27-217 (362)
120 3o0g_A Cell division protein k 100.0 7E-30 2.4E-34 278.7 10.4 185 780-973 2-190 (292)
121 1ob3_A PFPK5, cell division co 100.0 2.6E-30 9E-35 281.4 7.0 185 780-973 2-189 (288)
122 3qd2_B Eukaryotic translation 100.0 7.6E-30 2.6E-34 283.9 10.9 191 778-974 4-265 (332)
123 2acx_A G protein-coupled recep 100.0 6.8E-30 2.3E-34 299.2 10.8 193 779-978 183-380 (576)
124 1ozn_A Reticulon 4 receptor; N 100.0 7.8E-29 2.7E-33 269.3 18.0 251 427-683 14-266 (285)
125 2x4f_A Myosin light chain kina 100.0 4.1E-30 1.4E-34 289.8 8.2 181 784-973 93-276 (373)
126 4hcu_A Tyrosine-protein kinase 100.0 4.4E-30 1.5E-34 276.7 7.9 188 779-974 9-196 (269)
127 2r5t_A Serine/threonine-protei 100.0 3.2E-30 1.1E-34 289.9 7.2 196 779-981 37-239 (373)
128 2y0a_A Death-associated protei 100.0 1.4E-29 4.7E-34 280.7 11.7 185 779-973 10-205 (326)
129 3ugc_A Tyrosine-protein kinase 100.0 3.8E-30 1.3E-34 281.2 6.8 189 779-973 9-205 (295)
130 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.2E-29 4.1E-34 296.7 11.3 195 779-979 184-385 (543)
131 2qol_A Ephrin receptor; recept 100.0 5E-30 1.7E-34 289.3 7.7 190 779-974 44-239 (373)
132 2nru_A Interleukin-1 receptor- 100.0 3.2E-29 1.1E-33 275.6 13.7 199 767-973 12-222 (307)
133 3soc_A Activin receptor type-2 100.0 7.4E-30 2.5E-34 282.5 7.8 195 778-979 22-234 (322)
134 3tt0_A Basic fibroblast growth 100.0 1.3E-29 4.5E-34 287.4 10.0 191 778-974 67-282 (382)
135 1ozn_A Reticulon 4 receptor; N 100.0 4.5E-29 1.5E-33 271.2 13.7 250 453-705 14-265 (285)
136 3g06_A SSPH2 (leucine-rich rep 100.0 4E-29 1.4E-33 297.4 14.1 293 57-395 10-308 (622)
137 2pmi_A Negative RE, cyclin-dep 100.0 1.1E-29 3.9E-34 280.3 8.6 186 778-972 3-196 (317)
138 2y94_A 5'-AMP-activated protei 100.0 1.2E-29 4.2E-34 293.4 9.1 185 779-972 15-203 (476)
139 1luf_A Muscle-specific tyrosin 100.0 9.2E-30 3.1E-34 284.7 7.8 193 775-973 42-264 (343)
140 1rjb_A FL cytokine receptor; k 100.0 2E-29 6.7E-34 282.1 10.5 192 776-973 41-262 (344)
141 2ivs_A Proto-oncogene tyrosine 100.0 2E-29 7E-34 278.1 10.4 190 778-973 21-240 (314)
142 3gen_A Tyrosine-protein kinase 100.0 3.8E-30 1.3E-34 279.4 3.9 189 778-974 22-210 (283)
143 4ejn_A RAC-alpha serine/threon 100.0 8E-30 2.7E-34 295.4 6.6 186 779-973 147-337 (446)
144 4euu_A Serine/threonine-protei 100.0 3.3E-29 1.1E-33 277.1 10.8 171 779-955 8-188 (319)
145 3cok_A Serine/threonine-protei 100.0 4.7E-29 1.6E-33 270.1 11.6 188 778-973 9-200 (278)
146 3l9p_A Anaplastic lymphoma kin 100.0 4.6E-30 1.6E-34 289.2 3.8 190 779-974 70-275 (367)
147 3lb7_A RAF proto-oncogene seri 100.0 2.3E-29 8E-34 276.3 9.1 190 778-973 34-225 (307)
148 3uc3_A Serine/threonine-protei 100.0 9.2E-30 3.1E-34 286.0 5.9 192 778-979 18-214 (361)
149 2izr_A Casein kinase I isoform 100.0 1.8E-29 6E-34 280.6 8.0 185 779-972 8-204 (330)
150 3p1a_A MYT1 kinase, membrane-a 100.0 9.9E-30 3.4E-34 280.0 5.8 184 779-973 56-243 (311)
151 3ork_A Serine/threonine protei 100.0 8E-30 2.7E-34 280.9 4.9 188 779-973 11-207 (311)
152 3rp9_A Mitogen-activated prote 100.0 1.8E-29 6E-34 293.9 7.8 191 779-977 52-278 (458)
153 3kn6_A Ribosomal protein S6 ki 100.0 4.8E-29 1.6E-33 276.1 10.8 177 785-973 16-197 (325)
154 2pvf_A Fibroblast growth facto 100.0 4.7E-29 1.6E-33 277.7 10.8 191 778-974 33-248 (334)
155 3n9x_A Phosphotransferase; mal 100.0 3.8E-29 1.3E-33 288.2 10.4 187 779-973 25-240 (432)
156 4e5w_A Tyrosine-protein kinase 100.0 4.6E-29 1.6E-33 273.7 10.4 189 779-973 20-217 (302)
157 3gni_B Strad alpha; kinase fol 100.0 5.6E-29 1.9E-33 283.3 11.3 190 778-973 23-225 (389)
158 1t46_A HOMO sapiens V-KIT hard 100.0 3.1E-29 1.1E-33 276.5 8.9 190 778-973 21-235 (313)
159 2w4o_A Calcium/calmodulin-depe 100.0 3E-29 1E-33 280.6 8.8 184 778-973 51-238 (349)
160 3lxl_A Tyrosine-protein kinase 100.0 5.1E-29 1.8E-33 276.6 10.4 189 779-973 22-218 (327)
161 3poz_A Epidermal growth factor 100.0 2E-29 6.8E-34 279.7 6.6 188 779-973 14-207 (327)
162 3qup_A Tyrosine-protein kinase 100.0 2.3E-29 8E-34 278.9 7.1 191 778-974 21-228 (323)
163 1u5q_A Serine/threonine protei 100.0 3.3E-29 1.1E-33 279.8 8.2 182 779-973 53-241 (348)
164 2xir_A Vascular endothelial gr 100.0 2.6E-29 9E-34 277.5 7.3 199 769-973 16-238 (316)
165 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-27 7.7E-32 282.4 23.9 208 424-665 101-308 (622)
166 3kex_A Receptor tyrosine-prote 100.0 1.9E-29 6.3E-34 279.8 5.5 188 779-973 12-205 (325)
167 1p4o_A Insulin-like growth fac 100.0 1.4E-29 4.9E-34 280.4 4.5 196 773-974 18-229 (322)
168 3dls_A PAS domain-containing s 100.0 2.2E-29 7.5E-34 280.0 5.9 187 778-973 22-218 (335)
169 4fvq_A Tyrosine-protein kinase 100.0 2.6E-29 9E-34 273.7 6.3 188 779-978 7-213 (289)
170 3og7_A AKAP9-BRAF fusion prote 100.0 3.4E-29 1.2E-33 272.8 7.1 190 778-973 22-213 (289)
171 3kk8_A Calcium/calmodulin depe 100.0 1.6E-28 5.5E-33 266.7 12.2 185 779-973 5-195 (284)
172 3f3z_A Calcium/calmodulin-depe 100.0 8.9E-29 3E-33 267.7 10.1 185 778-973 7-195 (277)
173 3t9t_A Tyrosine-protein kinase 100.0 4.4E-29 1.5E-33 268.5 7.6 187 779-973 7-193 (267)
174 3pfq_A PKC-B, PKC-beta, protei 100.0 5.6E-29 1.9E-33 301.1 9.3 195 778-979 339-538 (674)
175 2qr7_A Ribosomal protein S6 ki 100.0 4.8E-29 1.6E-33 277.6 8.0 182 778-972 20-207 (342)
176 2a2a_A Death-associated protei 100.0 1.2E-28 4E-33 272.8 11.0 185 779-973 11-206 (321)
177 3mtl_A Cell division protein k 100.0 2.7E-29 9.3E-34 278.2 5.8 185 780-973 2-189 (324)
178 3dbq_A Dual specificity protei 100.0 3.9E-29 1.3E-33 279.4 7.0 172 779-956 8-183 (343)
179 1csn_A Casein kinase-1; phosph 100.0 1.9E-28 6.5E-33 268.2 12.0 186 779-973 9-206 (298)
180 1ua2_A CAK, cell division prot 100.0 4.4E-29 1.5E-33 279.3 7.0 189 776-973 6-201 (346)
181 1mp8_A Focal adhesion kinase 1 99.9 4.5E-29 1.6E-33 270.6 6.9 188 778-973 13-205 (281)
182 2i1m_A Macrophage colony-stimu 99.9 4.4E-29 1.5E-33 278.0 6.9 194 775-974 41-255 (333)
183 3oz6_A Mitogen-activated prote 99.9 6.8E-29 2.3E-33 282.4 8.5 187 777-972 6-218 (388)
184 1qcf_A Haematopoetic cell kina 99.9 3.9E-29 1.3E-33 290.0 6.5 189 777-974 185-374 (454)
185 2eue_A Carbon catabolite derep 99.9 6.9E-29 2.4E-33 268.3 8.0 185 779-973 12-200 (275)
186 2yex_A Serine/threonine-protei 99.9 8.3E-29 2.9E-33 267.8 8.5 190 778-973 5-196 (276)
187 3o53_A Protein LRIM1, AGAP0063 99.9 2.4E-29 8.3E-34 277.5 4.3 267 350-660 13-282 (317)
188 2p1m_B Transport inhibitor res 99.9 6.2E-31 2.1E-35 317.4 -9.4 256 68-332 34-324 (594)
189 1nxk_A MAP kinase-activated pr 99.9 1.5E-28 5.1E-33 279.9 10.9 181 779-973 60-251 (400)
190 3fdn_A Serine/threonine-protei 99.9 9.8E-29 3.3E-33 267.7 8.9 185 778-973 7-195 (279)
191 3q4u_A Activin receptor type-1 99.9 1.7E-28 5.8E-33 269.0 10.8 195 779-979 7-219 (301)
192 2rku_A Serine/threonine-protei 99.9 2.1E-28 7.3E-33 267.2 11.5 186 779-973 14-203 (294)
193 2owb_A Serine/threonine-protei 99.9 1.8E-28 6.1E-33 273.0 11.0 187 778-973 39-229 (335)
194 2buj_A Serine/threonine-protei 99.9 9.8E-29 3.4E-33 273.1 8.8 193 778-973 27-234 (317)
195 2w1i_A JAK2; chromosomal rearr 99.9 1.7E-28 5.9E-33 272.2 10.8 189 779-973 40-236 (326)
196 2vuw_A Serine/threonine-protei 99.9 2.1E-29 7.1E-34 280.8 3.3 178 779-972 19-263 (336)
197 3kmu_A ILK, integrin-linked ki 99.9 8.1E-29 2.8E-33 267.0 7.7 184 779-973 9-199 (271)
198 3i6u_A CDS1, serine/threonine- 99.9 7E-29 2.4E-33 284.6 7.6 189 777-973 132-332 (419)
199 4agu_A Cyclin-dependent kinase 99.9 1.1E-28 3.8E-33 271.9 8.9 186 779-973 2-191 (311)
200 1k9a_A Carboxyl-terminal SRC k 99.9 1.6E-28 5.4E-33 284.4 10.5 182 778-973 191-374 (450)
201 1opk_A P150, C-ABL, proto-onco 99.9 7.4E-29 2.5E-33 290.4 7.8 189 778-974 218-408 (495)
202 3llt_A Serine/threonine kinase 99.9 7E-29 2.4E-33 279.5 7.3 194 767-973 22-247 (360)
203 1qpc_A LCK kinase; alpha beta 99.9 9.1E-29 3.1E-33 267.9 7.6 189 777-974 10-199 (279)
204 1vzo_A Ribosomal protein S6 ki 99.9 4.9E-29 1.7E-33 279.6 5.4 189 779-973 53-250 (355)
205 2y7j_A Phosphorylase B kinase 99.9 2.6E-28 8.8E-33 274.8 11.1 194 773-973 87-293 (365)
206 3lzb_A Epidermal growth factor 99.9 1.2E-28 4E-33 273.3 7.8 188 779-973 14-207 (327)
207 1x8b_A WEE1HU, WEE1-like prote 99.9 1.9E-28 6.4E-33 266.7 9.2 185 778-973 9-219 (289)
208 2zmd_A Dual specificity protei 99.9 1.4E-28 4.9E-33 279.2 8.1 172 779-956 55-230 (390)
209 1u59_A Tyrosine-protein kinase 99.9 3E-28 1E-32 265.0 10.3 188 779-973 8-201 (287)
210 3pg1_A Mitogen-activated prote 99.9 1.5E-28 5.3E-33 276.9 8.2 194 770-973 12-222 (362)
211 2vgo_A Serine/threonine-protei 99.9 3.4E-28 1.2E-32 264.2 10.4 184 779-973 13-200 (284)
212 2ac3_A MAP kinase-interacting 99.9 2E-28 6.8E-33 270.5 8.7 188 779-973 11-214 (316)
213 3hko_A Calcium/calmodulin-depe 99.9 1.4E-28 4.7E-33 275.4 7.5 193 775-973 21-264 (345)
214 3is5_A Calcium-dependent prote 99.9 1.2E-28 4.1E-33 267.9 6.8 185 779-973 21-213 (285)
215 4f0f_A Serine/threonine-protei 99.9 4E-28 1.4E-32 264.1 10.9 182 779-973 18-216 (287)
216 3o53_A Protein LRIM1, AGAP0063 99.9 1.6E-28 5.6E-33 270.9 7.8 257 108-404 13-271 (317)
217 3lxp_A Non-receptor tyrosine-p 99.9 5.3E-28 1.8E-32 267.2 11.9 189 782-978 33-232 (318)
218 3mdy_A Bone morphogenetic prot 99.9 4.4E-28 1.5E-32 270.3 11.4 197 774-979 31-248 (337)
219 3dtc_A Mitogen-activated prote 99.9 2.1E-28 7.2E-33 263.8 8.4 182 779-973 6-202 (271)
220 3gbz_A Kinase, CMGC CDK; ssgci 99.9 7.1E-29 2.4E-33 275.5 4.7 189 775-973 29-226 (329)
221 4eut_A Serine/threonine-protei 99.9 1.3E-28 4.4E-33 280.6 6.8 172 779-956 8-189 (396)
222 3mwu_A Calmodulin-domain prote 99.9 1.7E-28 5.9E-33 287.5 8.1 185 778-973 20-210 (486)
223 3op5_A Serine/threonine-protei 99.9 9.1E-29 3.1E-33 278.8 5.3 189 778-973 33-249 (364)
224 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.2E-28 4.3E-33 285.4 6.6 187 778-973 182-369 (452)
225 3ttj_A Mitogen-activated prote 99.9 1.5E-28 5.1E-33 285.0 7.1 182 779-973 61-251 (464)
226 3g2f_A Bone morphogenetic prot 99.9 3E-28 1E-32 271.5 9.4 188 778-974 11-224 (336)
227 1mqb_A Ephrin type-A receptor 99.9 2.3E-28 7.7E-33 271.9 8.3 189 779-973 43-238 (333)
228 2h34_A Serine/threonine-protei 99.9 4.3E-28 1.5E-32 266.7 10.4 188 778-973 32-223 (309)
229 3mi9_A Cell division protein k 99.9 1.7E-28 5.8E-33 275.3 7.3 188 779-973 16-217 (351)
230 3a7i_A MST3 kinase, serine/thr 99.9 5.8E-28 2E-32 265.0 11.0 185 779-973 21-207 (303)
231 2o6q_A Variable lymphocyte rec 99.9 2.1E-27 7.1E-32 255.7 15.0 218 66-312 2-219 (270)
232 3cc6_A Protein tyrosine kinase 99.9 2.3E-28 7.9E-33 265.1 7.5 188 778-973 10-202 (281)
233 3lij_A Calcium/calmodulin depe 99.9 3.1E-28 1.1E-32 285.8 9.2 184 779-973 36-225 (494)
234 3q5i_A Protein kinase; CDPK, m 99.9 4.5E-28 1.5E-32 285.2 10.6 185 778-973 34-235 (504)
235 3kfa_A Tyrosine-protein kinase 99.9 5.4E-29 1.8E-33 271.1 2.3 190 777-974 10-201 (288)
236 2h6d_A 5'-AMP-activated protei 99.9 2.9E-28 1E-32 263.5 8.0 185 779-972 10-198 (276)
237 3com_A Serine/threonine-protei 99.9 4.7E-28 1.6E-32 267.2 9.7 187 777-973 26-213 (314)
238 1zy4_A Serine/threonine-protei 99.9 2.3E-28 8E-33 268.0 7.2 190 778-974 4-220 (303)
239 2a19_B Interferon-induced, dou 99.9 2.6E-28 8.9E-33 265.0 7.4 184 778-974 9-210 (284)
240 3g33_A Cell division protein k 99.9 3.1E-28 1.1E-32 267.8 8.0 185 778-972 7-206 (308)
241 3byv_A Rhoptry kinase; malaria 99.9 9.1E-29 3.1E-33 280.1 3.7 169 779-957 72-277 (377)
242 3brb_A Proto-oncogene tyrosine 99.9 2.8E-28 9.5E-33 268.9 7.2 192 776-973 30-237 (313)
243 2eva_A TAK1 kinase - TAB1 chim 99.9 4.5E-28 1.5E-32 266.2 8.7 182 779-973 7-191 (307)
244 2wqm_A Serine/threonine-protei 99.9 3E-28 1E-32 268.3 7.2 188 778-973 30-224 (310)
245 3f66_A Hepatocyte growth facto 99.9 3.3E-28 1.1E-32 266.3 7.5 189 779-973 24-220 (298)
246 3nyv_A Calmodulin-domain prote 99.9 2.2E-28 7.5E-33 286.7 6.5 185 778-973 24-215 (484)
247 3eb0_A Putative uncharacterize 99.9 5.3E-28 1.8E-32 274.5 9.3 183 776-972 3-229 (383)
248 3eqc_A Dual specificity mitoge 99.9 2.2E-28 7.6E-33 275.3 6.1 184 779-973 32-218 (360)
249 1fvr_A Tyrosine-protein kinase 99.9 5.2E-28 1.8E-32 268.4 8.9 187 779-974 24-230 (327)
250 1cm8_A Phosphorylated MAP kina 99.9 2.5E-28 8.7E-33 274.9 6.3 180 779-972 24-213 (367)
251 2yfx_A Tyrosine-protein kinase 99.9 2.2E-28 7.6E-33 271.4 5.6 190 778-973 28-233 (327)
252 2pml_X PFPK7, Ser/Thr protein 99.9 3.5E-28 1.2E-32 272.4 7.2 184 779-972 30-239 (348)
253 1phk_A Phosphorylase kinase; g 99.9 1E-27 3.5E-32 262.3 10.7 189 778-973 15-217 (298)
254 3nsz_A CK II alpha, casein kin 99.9 8.3E-28 2.9E-32 267.2 10.1 179 779-973 35-219 (330)
255 3gxj_A TGF-beta receptor type- 99.9 9.8E-29 3.3E-33 271.1 2.4 173 779-957 2-187 (303)
256 3bhy_A Death-associated protei 99.9 8.7E-28 3E-32 260.8 9.8 185 779-973 4-199 (283)
257 2ycf_A Serine/threonine-protei 99.9 3.7E-28 1.3E-32 269.0 6.8 185 778-973 8-207 (322)
258 2ozo_A Tyrosine-protein kinase 99.9 4.1E-28 1.4E-32 290.8 7.6 186 781-973 336-527 (613)
259 2clq_A Mitogen-activated prote 99.9 1.2E-27 4.2E-32 261.3 10.7 188 780-973 22-213 (295)
260 1xbb_A Tyrosine-protein kinase 99.9 5.4E-28 1.8E-32 263.6 7.6 188 778-973 14-208 (291)
261 2v62_A Serine/threonine-protei 99.9 2.5E-28 8.6E-33 273.0 5.1 187 779-973 36-248 (345)
262 2x7f_A TRAF2 and NCK-interacti 99.9 2.8E-28 9.7E-33 270.5 5.2 198 770-973 14-222 (326)
263 2h8h_A Proto-oncogene tyrosine 99.9 2.5E-28 8.5E-33 288.6 5.0 188 777-973 264-452 (535)
264 2jam_A Calcium/calmodulin-depe 99.9 6.3E-28 2.2E-32 264.8 7.4 185 778-973 7-195 (304)
265 4aaa_A Cyclin-dependent kinase 99.9 2.9E-28 1E-32 270.9 4.7 186 779-973 24-213 (331)
266 4hgt_A Casein kinase I isoform 99.9 1.4E-27 4.7E-32 261.0 9.9 187 778-973 7-203 (296)
267 3c1x_A Hepatocyte growth facto 99.9 2.8E-28 9.5E-33 274.7 4.5 187 781-973 90-284 (373)
268 2wtk_C Serine/threonine-protei 99.9 1.6E-27 5.5E-32 261.8 10.4 191 778-973 3-201 (305)
269 2j7t_A Serine/threonine-protei 99.9 1.6E-28 5.6E-33 269.3 2.3 188 778-973 17-210 (302)
270 3qyz_A Mitogen-activated prote 99.9 1.2E-27 4.3E-32 269.5 9.2 187 778-973 25-220 (364)
271 1b6c_B TGF-B superfamily recep 99.9 4.3E-27 1.5E-31 262.8 13.5 203 771-979 33-253 (342)
272 3an0_A Dual specificity mitoge 99.9 6E-28 2.1E-32 269.6 6.5 186 778-973 49-245 (340)
273 3ll6_A Cyclin G-associated kin 99.9 1.1E-27 3.6E-32 267.1 8.3 192 778-973 26-241 (337)
274 3uzp_A CKI-delta, CKID, casein 99.9 2.3E-27 8E-32 259.2 10.8 186 779-973 8-203 (296)
275 3pls_A Macrophage-stimulating 99.9 8.5E-28 2.9E-32 263.0 7.2 187 781-973 22-216 (298)
276 2w5a_A Serine/threonine-protei 99.9 3.4E-28 1.2E-32 263.4 4.0 187 779-973 5-204 (279)
277 4e7w_A Glycogen synthase kinas 99.9 1E-27 3.5E-32 272.7 8.0 180 779-972 39-229 (394)
278 2r3i_A Cell division protein k 99.9 6.8E-28 2.3E-32 263.9 6.3 186 779-973 2-192 (299)
279 1u46_A ACK-1, activated CDC42 99.9 7.6E-28 2.6E-32 262.4 6.5 188 779-973 17-212 (291)
280 3oja_A Leucine-rich immune mol 99.9 1.6E-27 5.5E-32 278.3 9.6 234 372-673 35-270 (487)
281 1t4h_A Serine/threonine-protei 99.9 2E-27 6.8E-32 259.0 9.6 183 779-973 25-217 (290)
282 3q60_A ROP5B; pseudokinase, tr 99.9 8.1E-28 2.8E-32 271.8 6.7 183 779-973 61-281 (371)
283 2jii_A Serine/threonine-protei 99.9 4.2E-28 1.4E-32 272.1 4.2 183 779-973 41-256 (352)
284 1j1b_A Glycogen synthase kinas 99.9 1.4E-27 4.7E-32 273.9 8.5 179 780-972 54-244 (420)
285 2vwi_A Serine/threonine-protei 99.9 2.2E-28 7.7E-33 268.2 1.6 192 776-973 11-215 (303)
286 2z62_A TOLL-like receptor 4, v 99.9 1.8E-26 6.3E-31 249.3 16.5 210 475-685 29-244 (276)
287 3oja_A Leucine-rich immune mol 99.9 3.8E-27 1.3E-31 275.1 11.9 233 130-402 35-269 (487)
288 3lm5_A Serine/threonine-protei 99.9 1.5E-27 5E-32 264.7 7.6 193 772-973 20-221 (327)
289 1byg_A CSK, protein (C-termina 99.9 7.2E-28 2.5E-32 260.7 4.9 182 778-973 19-202 (278)
290 2xrw_A Mitogen-activated prote 99.9 2.3E-27 8E-32 267.8 9.0 182 779-973 24-214 (371)
291 3fme_A Dual specificity mitoge 99.9 9.7E-28 3.3E-32 261.4 5.5 186 778-973 5-201 (290)
292 2fst_X Mitogen-activated prote 99.9 6.1E-28 2.1E-32 271.5 3.9 181 779-973 28-218 (367)
293 2iwi_A Serine/threonine-protei 99.9 7.5E-28 2.6E-32 265.3 4.5 189 774-972 25-226 (312)
294 4fl3_A Tyrosine-protein kinase 99.9 1.7E-27 5.8E-32 286.1 7.7 181 786-974 375-561 (635)
295 3cek_A Dual specificity protei 99.9 4.5E-28 1.5E-32 267.2 2.4 181 770-956 18-202 (313)
296 3sv0_A Casein kinase I-like; t 99.9 3.8E-27 1.3E-31 273.0 10.3 185 779-972 6-200 (483)
297 1wak_A Serine/threonine-protei 99.9 2.3E-27 7.7E-32 271.0 7.8 182 779-973 36-281 (397)
298 3rgf_A Cyclin-dependent kinase 99.9 1.2E-27 4E-32 273.7 4.8 184 780-972 20-223 (405)
299 2i6l_A Mitogen-activated prote 99.9 2.6E-27 8.9E-32 261.9 7.4 186 779-973 10-213 (320)
300 2b9h_A MAP kinase FUS3, mitoge 99.9 4.5E-27 1.5E-31 263.9 9.2 186 779-973 10-211 (353)
301 2j0j_A Focal adhesion kinase 1 99.9 2.9E-27 9.8E-32 285.3 7.7 188 778-973 388-580 (656)
302 3p23_A Serine/threonine-protei 99.9 1.4E-27 4.8E-32 274.1 4.8 189 779-974 23-218 (432)
303 2pzi_A Probable serine/threoni 99.9 3.2E-27 1.1E-31 288.0 7.8 180 779-975 79-266 (681)
304 4azs_A Methyltransferase WBDD; 99.9 2.7E-27 9.4E-32 280.0 6.8 164 787-959 241-416 (569)
305 3kvw_A DYRK2, dual specificity 99.9 5.6E-27 1.9E-31 269.4 9.2 183 778-973 95-287 (429)
306 4exu_A Mitogen-activated prote 99.9 3.7E-27 1.3E-31 266.2 7.3 180 779-973 41-230 (371)
307 1z57_A Dual specificity protei 99.9 7.1E-27 2.4E-31 260.6 9.4 183 779-974 13-223 (339)
308 2z62_A TOLL-like receptor 4, v 99.9 9.6E-26 3.3E-30 243.7 17.9 225 428-658 11-241 (276)
309 1blx_A Cyclin-dependent kinase 99.9 6E-27 2E-31 259.8 8.6 186 778-973 9-207 (326)
310 2p1m_B Transport inhibitor res 99.9 9.4E-29 3.2E-33 298.3 -6.8 421 108-558 46-518 (594)
311 2wei_A Calmodulin-domain prote 99.9 4.7E-27 1.6E-31 255.6 7.0 186 777-973 19-210 (287)
312 3a99_A Proto-oncogene serine/t 99.9 2.3E-27 7.7E-32 262.3 4.0 186 777-972 40-236 (320)
313 2o6q_A Variable lymphocyte rec 99.9 4.6E-25 1.6E-29 237.3 21.7 206 475-683 17-223 (270)
314 1p9a_G Platelet glycoprotein I 99.9 1.3E-25 4.3E-30 243.9 17.1 207 469-681 5-211 (290)
315 3aln_A Dual specificity mitoge 99.9 1.4E-26 5E-31 256.8 9.8 185 779-973 21-217 (327)
316 3e3p_A Protein kinase, putativ 99.9 8.8E-27 3E-31 262.3 8.1 192 773-973 16-220 (360)
317 3fhr_A MAP kinase-activated pr 99.9 2E-26 6.9E-31 256.4 9.8 181 778-973 26-217 (336)
318 3coi_A Mitogen-activated prote 99.9 8.2E-27 2.8E-31 261.7 6.3 180 779-973 23-212 (353)
319 3qa8_A MGC80376 protein; kinas 99.9 6.9E-27 2.4E-31 276.2 4.7 187 778-973 12-211 (676)
320 2rio_A Serine/threonine-protei 99.9 1.4E-26 4.7E-31 266.8 7.1 188 780-974 15-228 (434)
321 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.1E-27 3.9E-32 264.8 -2.0 178 773-956 26-208 (319)
322 2vx3_A Dual specificity tyrosi 99.9 4.4E-26 1.5E-30 258.5 9.7 184 778-972 52-245 (382)
323 1q8y_A SR protein kinase; tran 99.9 2.2E-26 7.4E-31 260.5 5.8 182 779-973 18-223 (373)
324 3rfs_A Internalin B, repeat mo 99.9 4.7E-25 1.6E-29 237.4 15.0 206 469-685 36-242 (272)
325 2eu9_A Dual specificity protei 99.9 6.8E-26 2.3E-30 254.4 8.7 182 779-973 18-227 (355)
326 2dyl_A Dual specificity mitoge 99.9 3.7E-26 1.3E-30 252.5 5.4 185 779-973 24-217 (318)
327 1p9a_G Platelet glycoprotein I 99.9 4.2E-24 1.4E-28 231.8 18.0 206 493-704 5-211 (290)
328 3rfs_A Internalin B, repeat mo 99.9 1.2E-24 4.2E-29 234.1 13.5 212 100-323 36-247 (272)
329 3m19_A Variable lymphocyte rec 99.9 2.3E-24 7.7E-29 229.2 13.1 191 67-264 3-193 (251)
330 4glp_A Monocyte differentiatio 99.9 1.4E-24 4.9E-29 238.5 11.4 229 425-678 65-307 (310)
331 2ast_B S-phase kinase-associat 99.9 6.5E-26 2.2E-30 252.6 0.5 269 66-369 34-315 (336)
332 2xwt_C Thyrotropin receptor; s 99.9 2.6E-24 8.8E-29 227.0 12.8 196 475-675 32-236 (239)
333 3uqc_A Probable conserved tran 99.9 1.4E-24 4.7E-29 235.4 8.5 141 779-925 30-174 (286)
334 3goz_A Leucine-rich repeat-con 99.9 3.8E-25 1.3E-29 248.7 3.7 110 109-219 2-126 (362)
335 3dzo_A Rhoptry kinase domain; 99.9 8.8E-25 3E-29 250.0 6.6 182 779-973 77-305 (413)
336 4glp_A Monocyte differentiatio 99.9 1.9E-23 6.4E-28 229.6 16.8 207 422-655 89-308 (310)
337 3goz_A Leucine-rich repeat-con 99.9 4.4E-25 1.5E-29 248.2 3.7 230 85-314 2-269 (362)
338 2xwt_C Thyrotropin receptor; s 99.9 2.2E-23 7.5E-28 219.9 15.7 203 96-308 25-236 (239)
339 2ast_B S-phase kinase-associat 99.9 1.4E-24 4.6E-29 241.9 6.3 254 107-393 49-315 (336)
340 2ca6_A RAN GTPase-activating p 99.9 2.7E-25 9.1E-30 252.6 0.4 256 120-387 23-319 (386)
341 2ca6_A RAN GTPase-activating p 99.9 2.1E-25 7E-30 253.5 -1.3 240 96-336 23-317 (386)
342 3en9_A Glycoprotease, O-sialog 99.9 9.7E-25 3.3E-29 256.8 4.1 161 781-956 337-510 (540)
343 1h6u_A Internalin H; cell adhe 99.9 3.8E-23 1.3E-27 226.6 15.6 195 470-679 37-231 (308)
344 3m19_A Variable lymphocyte rec 99.9 7.8E-23 2.7E-27 217.3 17.3 182 474-681 14-195 (251)
345 3m2w_A MAP kinase-activated pr 99.9 1.5E-23 5.1E-28 229.3 10.7 144 779-930 16-170 (299)
346 1h6u_A Internalin H; cell adhe 99.9 1.5E-22 5.1E-27 221.9 16.8 179 469-661 58-236 (308)
347 4ay9_X Follicle-stimulating ho 99.9 3.2E-22 1.1E-26 223.7 18.3 138 469-606 74-215 (350)
348 3cvr_A Invasion plasmid antige 99.9 1.3E-23 4.4E-28 246.9 6.5 213 60-320 34-252 (571)
349 4ay9_X Follicle-stimulating ho 99.9 3E-22 1E-26 223.9 16.1 243 427-679 12-260 (350)
350 2o6s_A Variable lymphocyte rec 99.9 4.6E-22 1.6E-26 204.9 11.3 183 69-274 7-189 (208)
351 1zar_A RIO2 kinase; serine kin 99.9 4.8E-22 1.6E-26 214.2 11.6 153 773-956 83-253 (282)
352 3cvr_A Invasion plasmid antige 99.9 1.1E-21 3.7E-26 230.5 14.8 169 474-666 80-255 (571)
353 2o6s_A Variable lymphocyte rec 99.8 1.1E-20 3.6E-25 194.6 15.3 161 475-665 29-189 (208)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-21 1.2E-25 199.8 8.9 157 501-683 14-171 (220)
355 1h6t_A Internalin B; cell adhe 99.8 8.4E-21 2.9E-25 206.0 10.5 189 476-679 26-214 (291)
356 4b8c_D Glucose-repressible alc 99.8 1.2E-21 4.1E-26 239.0 4.0 235 34-284 128-369 (727)
357 3e6j_A Variable lymphocyte rec 99.8 2.8E-20 9.5E-25 194.4 12.7 163 60-239 10-172 (229)
358 2v9t_B SLIT homolog 2 protein 99.8 1.2E-20 4.2E-25 195.7 9.0 156 501-682 14-169 (220)
359 2xot_A Amphoterin-induced prot 99.8 3.4E-20 1.2E-24 208.1 12.9 180 477-682 21-206 (361)
360 1dce_A Protein (RAB geranylger 99.8 2.6E-22 8.9E-27 237.3 -4.6 188 102-313 346-548 (567)
361 1h6t_A Internalin B; cell adhe 99.8 6.6E-20 2.3E-24 198.9 13.0 174 470-656 42-215 (291)
362 1m9s_A Internalin B; cell inva 99.8 3.5E-20 1.2E-24 220.3 11.2 188 453-655 24-211 (605)
363 1m9s_A Internalin B; cell inva 99.8 1.1E-19 3.6E-24 216.2 13.5 169 451-632 44-212 (605)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-19 7.4E-24 186.2 12.0 152 157-312 15-167 (220)
365 2v9t_B SLIT homolog 2 protein 99.8 4.3E-19 1.5E-23 184.0 13.3 153 477-655 14-166 (220)
366 1xeu_A Internalin C; cellular 99.8 5.3E-20 1.8E-24 196.5 6.4 171 472-680 17-187 (263)
367 2xot_A Amphoterin-induced prot 99.8 1.3E-19 4.6E-24 203.2 9.8 175 157-335 22-202 (361)
368 1w8a_A SLIT protein; signaling 99.8 6.6E-20 2.3E-24 185.8 6.2 155 549-705 11-166 (192)
369 3e6j_A Variable lymphocyte rec 99.8 8.6E-19 2.9E-23 183.0 14.4 156 500-682 21-176 (229)
370 1dce_A Protein (RAB geranylger 99.8 2.8E-21 9.7E-26 228.4 -5.1 218 126-378 346-567 (567)
371 4b8c_D Glucose-repressible alc 99.8 4.8E-20 1.6E-24 224.9 5.1 184 490-682 216-408 (727)
372 1xeu_A Internalin C; cellular 99.8 3.9E-19 1.3E-23 189.7 10.0 165 454-632 23-187 (263)
373 4ezg_A Putative uncharacterize 99.8 1.2E-18 4.1E-23 177.5 10.2 156 493-679 39-195 (197)
374 1zth_A RIO1 serine protein kin 99.7 9.1E-19 3.1E-23 186.3 8.4 138 781-930 48-219 (258)
375 4ezg_A Putative uncharacterize 99.7 3.5E-18 1.2E-22 174.0 11.6 153 151-311 42-194 (197)
376 3sb4_A Hypothetical leucine ri 99.7 4.2E-18 1.4E-22 188.5 11.5 59 469-528 268-327 (329)
377 1w8a_A SLIT protein; signaling 99.7 8.3E-18 2.9E-22 170.3 12.7 175 525-705 11-187 (192)
378 3sb4_A Hypothetical leucine ri 99.7 2.1E-18 7.2E-23 190.9 8.3 282 104-400 24-326 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 5.1E-18 1.7E-22 171.8 7.0 131 549-682 13-143 (193)
380 2o6r_A Variable lymphocyte rec 99.7 7.9E-17 2.7E-21 160.9 11.3 134 548-683 9-142 (177)
381 2ell_A Acidic leucine-rich nuc 99.7 1.2E-16 4E-21 158.2 9.3 60 498-559 24-84 (168)
382 2ell_A Acidic leucine-rich nuc 99.7 2.5E-16 8.5E-21 155.8 10.4 107 474-582 24-133 (168)
383 4gyi_A RIO2 kinase; protein ki 99.6 4.9E-17 1.7E-21 178.8 5.3 137 780-930 95-265 (397)
384 2wfh_A SLIT homolog 2 protein 99.6 5.2E-16 1.8E-20 157.0 12.1 129 525-656 13-141 (193)
385 4fdw_A Leucine rich hypothetic 99.6 1E-15 3.5E-20 172.9 14.9 217 452-677 159-382 (401)
386 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.1E-21 152.5 7.5 81 593-673 64-148 (149)
387 2o6r_A Variable lymphocyte rec 99.6 7.8E-16 2.7E-20 153.6 11.1 135 69-219 7-141 (177)
388 2je0_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 149.9 7.9 107 474-582 17-126 (149)
389 4fs7_A Uncharacterized protein 99.6 1.7E-14 5.9E-19 163.6 19.3 158 168-332 61-218 (394)
390 4fdw_A Leucine rich hypothetic 99.6 2.3E-14 8E-19 161.8 20.0 256 243-561 129-385 (401)
391 1ds9_A Outer arm dynein; leuci 99.6 1.1E-16 3.9E-21 162.9 -0.1 130 175-311 45-185 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.4E-20 151.2 6.8 133 542-679 15-154 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 1.3E-16 4.6E-21 162.4 -1.4 155 126-288 15-186 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 3.6E-15 1.2E-19 148.6 7.3 110 469-582 14-126 (176)
395 4fs7_A Uncharacterized protein 99.5 1.3E-13 4.5E-18 156.3 19.9 331 241-669 62-392 (394)
396 3g39_A Variable lymphocyte rec 99.5 2.4E-14 8E-19 141.6 10.3 89 594-682 31-119 (170)
397 3g39_A Variable lymphocyte rec 99.5 3.3E-14 1.1E-18 140.5 10.0 108 548-657 11-118 (170)
398 2r9u_A Variable lymphocyte rec 99.5 5.5E-14 1.9E-18 139.4 10.5 107 549-681 15-121 (174)
399 2r9u_A Variable lymphocyte rec 99.5 5E-14 1.7E-18 139.7 9.3 112 524-662 14-125 (174)
400 3un9_A NLR family member X1; l 99.4 8.1E-15 2.8E-19 164.0 -5.3 111 129-239 72-196 (372)
401 4gt6_A Cell surface protein; l 99.3 3.7E-11 1.2E-15 136.1 22.0 159 168-332 53-215 (394)
402 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.9E-17 144.5 9.5 103 551-655 13-117 (347)
403 3un9_A NLR family member X1; l 99.3 7.2E-14 2.5E-18 156.2 -2.7 188 104-311 71-283 (372)
404 2ifg_A High affinity nerve gro 99.3 1.2E-12 4.2E-17 145.7 7.2 108 572-682 11-120 (347)
405 4gt6_A Cell surface protein; l 99.3 9.9E-11 3.4E-15 132.6 21.0 109 467-579 258-367 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.3 7.7E-12 2.6E-16 133.3 10.9 147 776-929 10-213 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 1.4E-10 4.7E-15 123.3 8.4 139 780-930 20-215 (264)
408 4h09_A Hypothetical leucine ri 99.0 9.1E-09 3.1E-13 115.8 21.6 97 467-566 256-352 (379)
409 2ra8_A Uncharacterized protein 99.0 1.3E-10 4.3E-15 128.7 5.4 205 80-309 106-341 (362)
410 4h09_A Hypothetical leucine ri 99.0 1.5E-08 5.2E-13 113.9 20.3 59 591-650 284-342 (379)
411 2ra8_A Uncharacterized protein 98.9 2.6E-10 9E-15 126.2 3.5 208 105-333 107-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 1.8E-09 6.3E-14 120.4 10.3 143 783-929 41-248 (359)
413 3rw6_A Nuclear RNA export fact 98.9 1.3E-11 4.5E-16 129.3 -8.7 23 68-90 77-99 (267)
414 3r70_A Aminoglycoside phosphot 98.6 2.8E-07 9.6E-12 100.8 12.9 137 781-930 38-238 (320)
415 1io0_A Tropomodulin; LRR prote 98.5 1.3E-08 4.5E-13 101.5 -0.7 119 96-215 27-164 (185)
416 3sg8_A APH(2'')-ID; antibiotic 98.5 3.3E-07 1.1E-11 99.5 9.8 137 785-930 25-224 (304)
417 3rw6_A Nuclear RNA export fact 98.4 2.9E-08 9.8E-13 104.0 0.5 90 591-682 139-237 (267)
418 3d1u_A Putative fructosamine-3 98.4 1.4E-06 4.8E-11 93.2 12.9 77 783-863 18-97 (288)
419 3tdw_A Gentamicin resistance p 98.3 2.2E-06 7.4E-11 92.9 12.6 136 785-929 24-224 (306)
420 1io0_A Tropomodulin; LRR prote 98.3 8.4E-08 2.9E-12 95.6 0.8 42 270-311 117-164 (185)
421 4gkh_A Aminoglycoside 3'-phosp 98.3 3.1E-06 1.1E-10 90.0 12.8 142 780-930 25-224 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 5.5E-06 1.9E-10 91.9 12.0 77 782-864 43-122 (362)
423 3ats_A Putative uncharacterize 98.2 2.6E-06 9E-11 94.6 9.0 80 785-864 25-121 (357)
424 2q83_A YTAA protein; 2635576, 97.9 4E-05 1.4E-09 84.4 10.6 139 786-929 38-252 (346)
425 2olc_A MTR kinase, methylthior 97.8 4.2E-05 1.4E-09 86.2 9.9 75 785-861 35-120 (397)
426 3f7w_A Putative fructosamine-3 97.6 0.00042 1.4E-08 74.0 12.7 80 780-863 15-97 (288)
427 3jr1_A Putative fructosamine-3 97.6 0.00034 1.2E-08 75.2 11.8 137 784-925 40-232 (312)
428 3e4g_A ATP synthase subunit S, 97.5 4.1E-05 1.4E-09 74.1 3.3 34 179-212 62-95 (176)
429 3e4g_A ATP synthase subunit S, 97.4 4.6E-05 1.6E-09 73.8 2.5 82 203-284 62-149 (176)
430 2pyw_A Uncharacterized protein 97.3 0.00046 1.6E-08 78.2 9.8 74 784-860 38-122 (420)
431 2ppq_A HSK, HK, homoserine kin 97.3 0.00075 2.6E-08 73.3 10.9 158 769-929 6-217 (322)
432 3csv_A Aminoglycoside phosphot 97.3 0.001 3.4E-08 72.8 11.2 139 786-929 24-217 (333)
433 3dxq_A Choline/ethanolamine ki 97.1 0.00084 2.9E-08 72.2 8.8 139 782-929 20-202 (301)
434 3rfe_A Platelet glycoprotein I 97.0 0.00099 3.4E-08 61.4 6.2 59 621-681 12-71 (130)
435 3feg_A Choline/ethanolamine ki 96.9 0.0018 6.2E-08 71.5 9.1 139 786-929 56-254 (379)
436 1zyl_A Hypothetical protein YI 96.9 0.0022 7.7E-08 69.7 9.7 140 786-929 32-223 (328)
437 2qg7_A Ethanolamine kinase PV0 96.9 0.0033 1.1E-07 71.4 10.7 74 785-863 113-188 (458)
438 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00041 1.4E-08 68.4 1.9 42 198-239 66-111 (197)
439 1nw1_A Choline kinase (49.2 KD 96.7 0.0026 9E-08 71.9 8.3 73 785-863 78-159 (429)
440 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00072 2.5E-08 66.7 2.5 18 270-287 94-111 (197)
441 3rfe_A Platelet glycoprotein I 96.6 0.0025 8.5E-08 58.7 5.7 56 597-654 12-68 (130)
442 3c5i_A Choline kinase; choline 96.6 0.0047 1.6E-07 68.5 9.0 74 785-863 38-121 (369)
443 3i1a_A Spectinomycin phosphotr 96.4 0.012 3.9E-07 64.3 10.9 33 898-930 205-237 (339)
444 3f2s_A CK, chetk-alpha, cholin 96.0 0.015 5.1E-07 64.5 9.2 141 785-929 57-280 (401)
445 3mes_A Choline kinase; malaria 95.0 0.075 2.6E-06 59.4 10.2 139 785-929 75-291 (424)
446 3g15_A CK, chetk-alpha, cholin 92.4 0.31 1.1E-05 54.2 9.3 30 900-929 245-280 (401)
447 2ks1_B Epidermal growth factor 77.6 0.7 2.4E-05 32.6 0.9 16 732-747 20-35 (44)
448 2l2t_A Receptor tyrosine-prote 68.5 1.2 4.1E-05 31.4 0.3 15 733-747 20-34 (44)
449 2jwa_A Receptor tyrosine-prote 67.4 1.2 4.1E-05 31.3 0.1 26 726-751 14-39 (44)
450 3cxl_A N-chimerin; SH2, RHO-GA 66.6 0.5 1.7E-05 53.5 -3.1 60 783-845 145-213 (463)
451 4ano_A ESSB; membrane protein, 60.5 16 0.00055 36.1 6.8 86 834-930 48-134 (219)
452 4ann_A ESSB; membrane protein, 55.3 12 0.0004 36.9 4.8 86 834-930 43-129 (215)
453 2k1k_A Ephrin type-A receptor 34.8 7.2 0.00025 26.6 -0.3 12 726-737 13-24 (38)
454 3ls8_A Phosphatidylinositol 3- 32.8 2.1E+02 0.007 33.0 11.1 46 876-928 454-501 (614)
455 2lz0_A Uncharacterized protein 30.2 47 0.0016 28.1 4.1 46 485-531 7-52 (100)
456 2lz0_A Uncharacterized protein 27.7 1.2E+02 0.004 25.6 6.2 46 461-507 7-52 (100)
457 2l6w_A Beta-type platelet-deri 29.1 17 0.00059 24.5 0.0 21 730-750 14-34 (39)
458 2yle_A Protein spire homolog 1 21.5 1E+02 0.0035 30.3 5.1 60 862-923 34-93 (229)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-92 Score=876.87 Aligned_cols=666 Identities=33% Similarity=0.477 Sum_probs=475.8
Q ss_pred hcCCCChhHHHHHHHHHHHhcCCCCccccCCCCCCCCCCceeeEEecCCCCcEEEEEeCCCCcccc---CCcc-------
Q 036229 31 ANTSSITTDQDALLALKAHITHDPTNFLAKNWNTSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGT---IPSQ------- 100 (982)
Q Consensus 31 ~~~~~~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~---~~~~------- 100 (982)
+...+.++|++||++||+++. ||. .+++|+.++|||+|.||+|+ .++|+.|+|+++++.|. +|++
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~--~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN--LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT--SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc--cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 344557899999999999997 433 78999988999999999999 68999999999999987 6654
Q ss_pred ----------------ccCCCCCCEEEcCCCCccccCcc--hhhhccCCcEEEccCCcccCccCccc-cCcCCCCccccc
Q 036229 101 ----------------LWNLSSLQSLNLGFNRLSGSIPS--AIFTLYTLKYVNFRGNQLSGAFPSFI-FNKSSLQHLDFS 161 (982)
Q Consensus 101 ----------------l~~l~~L~~L~L~~n~~~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls 161 (982)
++.+++|++|||++|.++|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++|||+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 45555666666666666655555 56666666666666666665555544 556666666666
Q ss_pred cCcccccCchhh--hcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCC
Q 036229 162 YNALSGEIPANI--CSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQ 239 (982)
Q Consensus 162 ~N~l~~~ip~~~--~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 239 (982)
+|.+++..|..+ +.++++|++|+|++|++++..|. ..+++|++|+|++|++++.+|. ++++++|++|+|++|+++
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~ 236 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCC
Confidence 666665544431 35566666666666666554432 5566666666666666655555 666666666666666666
Q ss_pred CchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcccccc-CCCcEEEccCccccccCcccc
Q 036229 240 GEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNL-HNLKLLDLSHNKLVGAVPATI 318 (982)
Q Consensus 240 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~ 318 (982)
+.+|..++++++|+.|++++|++.+.+|.. .+++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..+
T Consensus 237 ~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~ 314 (768)
T 3rgz_A 237 GDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314 (768)
T ss_dssp SCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGG
T ss_pred CcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHH
Confidence 666666666666666666666666655554 56666666666666666666666554 666666666666666666666
Q ss_pred cCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCC-CCCEEEeccccCccccCCcccc--CC
Q 036229 319 FNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNAS-KLSVLELGRNSFSGFIPNTFGN--LR 395 (982)
Q Consensus 319 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~--l~ 395 (982)
.++++|+.|++++|.+.+.++...+..+++|++|++++|++++.+|..+..++ +|++|++++|++++..|..+.. ++
T Consensus 315 ~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 394 (768)
T 3rgz_A 315 GSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394 (768)
T ss_dssp GGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTC
T ss_pred hcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccC
Confidence 66666666666666666555555455666666666666666666666666665 6666666666666666666555 56
Q ss_pred ccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccc
Q 036229 396 NLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTN 475 (982)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~ 475 (982)
+|+.|++++|.++... +..|.++++|++|+|++|++++..|... .. ..+|++|++++|++++.+|..+..+++
T Consensus 395 ~L~~L~L~~n~l~~~~-----p~~l~~l~~L~~L~Ls~N~l~~~~p~~l-~~-l~~L~~L~L~~n~l~~~~p~~~~~l~~ 467 (768)
T 3rgz_A 395 TLQELYLQNNGFTGKI-----PPTLSNCSELVSLHLSFNYLSGTIPSSL-GS-LSKLRDLKLWLNMLEGEIPQELMYVKT 467 (768)
T ss_dssp CCCEEECCSSEEEEEC-----CGGGGGCTTCCEEECCSSEEESCCCGGG-GG-CTTCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred CccEEECCCCcccccc-----CHHHhcCCCCCEEECcCCcccCcccHHH-hc-CCCCCEEECCCCcccCcCCHHHcCCCC
Confidence 6666666666665321 2235666677777777776665544332 11 245667777777777666766777777
Q ss_pred cceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCC
Q 036229 476 LIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS 555 (982)
Q Consensus 476 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 555 (982)
|+.|++++|++++.+|.+|.++++|++|+|++|++++.+|.++..+++|++|+|++|++++.+|..+.++++|+.|+|++
T Consensus 468 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 547 (768)
T 3rgz_A 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCS
T ss_pred ceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCC
Confidence 77777777777766677777777777777777777766777777777777777777777766777777777777777777
Q ss_pred Cccc-ccccccccccCce----------------------------------------------EEecCCCcccCCCccc
Q 036229 556 NKLT-SIPLTIWNLKGML----------------------------------------------YLNFSSNFFTGPLPLD 588 (982)
Q Consensus 556 N~l~-~ip~~~~~l~~L~----------------------------------------------~L~Ls~N~l~~~~~~~ 588 (982)
|+++ .+|..++....+. .++++.|.++|.+|..
T Consensus 548 N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~ 627 (768)
T 3rgz_A 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627 (768)
T ss_dssp SEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCS
T ss_pred CccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchh
Confidence 7766 6666554432222 2334446666666777
Q ss_pred cccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccc
Q 036229 589 IGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLE 668 (982)
Q Consensus 589 ~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 668 (982)
++.+++|+.||||+|+++|.+|.+|+.+++|+.|+|++|+++|.+|..|+++++|++||||+|+++|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCcccccCCCCCCCCCCCCcccccCcccCCCCCCCCCCCCccc
Q 036229 669 DLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSPNLQVPPCKTSI 716 (982)
Q Consensus 669 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~~~~~~~c~~~~ 716 (982)
+||||+|+++|.||.+++|.++.+.+|.|||++||.|. ++|....
T Consensus 708 ~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 708 EIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp EEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC
T ss_pred EEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCc
Confidence 99999999999999999999999999999999999984 4787543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.4e-73 Score=700.41 Aligned_cols=586 Identities=31% Similarity=0.434 Sum_probs=534.3
Q ss_pred CcEEEEEeCCCCccccCCc--cccCCCCCCEEEcCCCCccccCcchh-hhccCCcEEEccCCcccCccCcc---ccCcCC
Q 036229 81 HRVKVLNISHLNLTGTIPS--QLWNLSSLQSLNLGFNRLSGSIPSAI-FTLYTLKYVNFRGNQLSGAFPSF---IFNKSS 154 (982)
Q Consensus 81 ~~v~~L~l~~~~l~g~~~~--~l~~l~~L~~L~L~~n~~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~ 154 (982)
.+++.|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ ..+++|++|+|++|++++..|.. +.++++
T Consensus 100 ~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~ 179 (768)
T 3rgz_A 100 ASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGE 179 (768)
T ss_dssp TTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTT
T ss_pred CCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCC
Confidence 4688999999999999998 99999999999999999999999877 79999999999999999988887 889999
Q ss_pred CCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhcc
Q 036229 155 LQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLG 234 (982)
Q Consensus 155 L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 234 (982)
|++|++++|.+++.+|. ..+++|++|+|++|++++.+|. ++++++|++|+|++|++++.+|..++.+++|++|+|+
T Consensus 180 L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 180 LKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp CCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 99999999999987764 6899999999999999998887 9999999999999999999999999999999999999
Q ss_pred CCCCCCchhhhcCCCcccceEeccccccCCcCChhhhcc-CCCcEEEccCCccccCCCccccccCCCcEEEccCcccccc
Q 036229 235 YSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANL-TGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGA 313 (982)
Q Consensus 235 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 313 (982)
+|++++.+|.. .+++|+.|++++|++++.+|..+.+. ++|++|+|++|++++.+|..|.++++|++|+|++|++++.
T Consensus 256 ~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ 333 (768)
T 3rgz_A 256 SNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333 (768)
T ss_dssp SSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEE
T ss_pred CCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCc
Confidence 99999888875 89999999999999999999988775 9999999999999999999999999999999999999988
Q ss_pred Cccc-ccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccC--CCCCCEEEeccccCccccCCc
Q 036229 314 VPAT-IFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFN--ASKLSVLELGRNSFSGFIPNT 390 (982)
Q Consensus 314 ~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~i~~~~~~~ 390 (982)
+|.. +..+++|+.|++++|.+.+.++.......++|++|++++|++++.+|..+.. +++|++|++++|++++.+|..
T Consensus 334 ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~ 413 (768)
T 3rgz_A 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413 (768)
T ss_dssp CCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGG
T ss_pred CCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHH
Confidence 8876 8999999999999999987666554433349999999999999999988877 889999999999999999999
Q ss_pred cccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCccc
Q 036229 391 FGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEI 470 (982)
Q Consensus 391 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~ 470 (982)
|..+++|+.|++++|.++.... ..|..+++|++|++++|++.+..|.... ...+|++|++++|++++.+|..+
T Consensus 414 l~~l~~L~~L~Ls~N~l~~~~p-----~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 414 LSNCSELVSLHLSFNYLSGTIP-----SSLGSLSKLRDLKLWLNMLEGEIPQELM--YVKTLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp GGGCTTCCEEECCSSEEESCCC-----GGGGGCTTCCEEECCSSCCCSCCCGGGG--GCTTCCEEECCSSCCCSCCCGGG
T ss_pred HhcCCCCCEEECcCCcccCccc-----HHHhcCCCCCEEECCCCcccCcCCHHHc--CCCCceEEEecCCcccCcCCHHH
Confidence 9999999999999999985432 3588899999999999999987665432 23689999999999999999999
Q ss_pred ccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccc
Q 036229 471 GNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGT 550 (982)
Q Consensus 471 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 550 (982)
.++++|+.|++++|++++.+|.+|+.+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..+.....+..
T Consensus 487 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~ 566 (768)
T 3rgz_A 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBC
T ss_pred hcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988766544433
Q ss_pred ----------------------------------------------cccCCCccc-ccccccccccCceEEecCCCcccC
Q 036229 551 ----------------------------------------------LSLGSNKLT-SIPLTIWNLKGMLYLNFSSNFFTG 583 (982)
Q Consensus 551 ----------------------------------------------L~L~~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~~ 583 (982)
++++.|.++ .+|..+..+++|++||+++|+++|
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g 646 (768)
T 3rgz_A 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646 (768)
T ss_dssp CSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBS
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccc
Confidence 344456666 577778889999999999999999
Q ss_pred CCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccc
Q 036229 584 PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEK 663 (982)
Q Consensus 584 ~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 663 (982)
.+|..+++++.|+.|||++|+++|.+|..|+++++|++|||++|+++|.+|..|+++++|++||||+|+++|.+|.. ..
T Consensus 647 ~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~ 725 (768)
T 3rgz_A 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQ 725 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SS
T ss_pred cCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999965 44
Q ss_pred ccccceeecCCCc-cccc
Q 036229 664 LSYLEDLDLSFNK-LKGE 680 (982)
Q Consensus 664 l~~L~~l~ls~N~-l~~~ 680 (982)
+..+....+.+|+ |+|.
T Consensus 726 ~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 726 FETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGSCGGGGCSCTEEEST
T ss_pred hccCCHHHhcCCchhcCC
Confidence 5566667788886 6653
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7.1e-66 Score=633.13 Aligned_cols=594 Identities=22% Similarity=0.225 Sum_probs=483.1
Q ss_pred EEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcc
Q 036229 86 LNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNAL 165 (982)
Q Consensus 86 L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 165 (982)
+++++++++ .+|..+. +++++|||++|.+++..|.+|.++++|++|+|++|++++..|..++++++|++|+|++|.+
T Consensus 9 ~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 85 (680)
T 1ziw_A 9 ADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNEL 85 (680)
T ss_dssp EECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCC
T ss_pred eECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCcc
Confidence 555666666 5666554 6788888888888876666788888888888888888887788888888888888888888
Q ss_pred cccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhh
Q 036229 166 SGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPRE 245 (982)
Q Consensus 166 ~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 245 (982)
+ .+|+..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|++++..+..
T Consensus 86 ~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 164 (680)
T 1ziw_A 86 S-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEE 164 (680)
T ss_dssp C-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHH
T ss_pred C-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHH
Confidence 7 677766688888888888888888777778888888888888888888777778888888888888888888777766
Q ss_pred cC--CCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcccc---ccCCCcEEEccCccccccCcccccC
Q 036229 246 FG--NLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIH---NLHNLKLLDLSHNKLVGAVPATIFN 320 (982)
Q Consensus 246 ~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~~ 320 (982)
+. .+++|+.|++++|++++..|..+..+++|+.|++++|.+.......+. ..++|+.|++++|.+++..|..+.+
T Consensus 165 ~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~ 244 (680)
T 1ziw_A 165 LDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLG 244 (680)
T ss_dssp HGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGG
T ss_pred hhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhc
Confidence 54 457888888888888888888888888888888888877643222211 2367888888888888877877777
Q ss_pred CCC--CceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCcc---------ccCC
Q 036229 321 MST--LTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSG---------FIPN 389 (982)
Q Consensus 321 l~~--L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~---------~~~~ 389 (982)
++. |+.|++++|.+.+..+. .+..+++|++|++++|++++..|..+.++++|++|++++|...+ +...
T Consensus 245 l~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~ 323 (680)
T 1ziw_A 245 LKWTNLTMLDLSYNNLNVVGND-SFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDF 323 (680)
T ss_dssp GGGSCCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTT
T ss_pred cCcCCCCEEECCCCCcCccCcc-cccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChh
Confidence 654 88888888888754433 34567888888888888888888888888889999888775442 2223
Q ss_pred ccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCC--CCCccccccccccccEEeccCCccccCCC
Q 036229 390 TFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDG--ILPRMSMGNLSHSLEYFDMSYCNVSGGFP 467 (982)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~~~~~~L~~Ldls~n~l~~~~p 467 (982)
.|..+++|+.|++++|.++.+... .|.++++|++|++++|.+.. +....+.......++.|++++|++++..|
T Consensus 324 ~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~ 398 (680)
T 1ziw_A 324 SFQWLKCLEHLNMEDNDIPGIKSN-----MFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIES 398 (680)
T ss_dssp TTTTCTTCCEEECCSCCBCCCCTT-----TTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECT
T ss_pred hcccCCCCCEEECCCCccCCCChh-----HhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeECh
Confidence 678888899999999988876543 47888899999999887542 22221111122578999999999999999
Q ss_pred cccccccccceEEecCCCCCCCCC-ccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCC--cCCCccccC
Q 036229 468 KEIGNLTNLIGIYLGGNKLNGSIP-ITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLS--GSIPACFSN 544 (982)
Q Consensus 468 ~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~ 544 (982)
..|..+++|+.|++++|++++.+| ..|.++++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|.+
T Consensus 399 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~ 478 (680)
T 1ziw_A 399 DAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQP 478 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTT
T ss_pred hhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCccccc
Confidence 999999999999999999987665 78999999999999999999889999999999999999999987 568899999
Q ss_pred CCcccccccCCCcccccccc-cccccCceEEecCCCcccCCCc--------cccccccccceeecccccccccccccccC
Q 036229 545 LASLGTLSLGSNKLTSIPLT-IWNLKGMLYLNFSSNFFTGPLP--------LDIGNLKVLIGIDFSTNNFSDVIPTVIGG 615 (982)
Q Consensus 545 l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~Ldls~N~l~~~~p~~~~~ 615 (982)
+++|++|+|++|+++.+|.. +..+++|++|++++|++++..+ ..++++++|+.|||++|+++.+.+..|++
T Consensus 479 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~ 558 (680)
T 1ziw_A 479 LRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKD 558 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred CCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccc
Confidence 99999999999999988865 5679999999999999986422 24789999999999999999776678999
Q ss_pred ccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccc-cccccceeecCCCcccccCCCCCCCCC
Q 036229 616 LTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLE-KLSYLEDLDLSFNKLKGEIPKGGSFGN 689 (982)
Q Consensus 616 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~l~ls~N~l~~~~p~~~~~~~ 689 (982)
+++|++|+|++|++++.++..|.++++|+.|+|++|+|++..|..+. .+++|+.+++++|++.|.++...+|..
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~ 633 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVN 633 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEEC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHH
Confidence 99999999999999988888899999999999999999988887787 799999999999999999886333433
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=9.5e-63 Score=605.33 Aligned_cols=571 Identities=23% Similarity=0.247 Sum_probs=503.2
Q ss_pred CcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCcccc
Q 036229 81 HRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDF 160 (982)
Q Consensus 81 ~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 160 (982)
.+++.|+|++|.+++..+..+.++++|++|||++|.+++..|.++.++++|++|+|++|++++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47999999999999877788999999999999999999989999999999999999999999655557999999999999
Q ss_pred ccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccc--cccchhhhhccCCCC
Q 036229 161 SYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIG--NLTKLKELYLGYSGL 238 (982)
Q Consensus 161 s~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l 238 (982)
++|.++ .+|+..|.++++|++|+|++|.+++..|..|+++++|++|++++|++++..+..+. .+++|++|++++|++
T Consensus 105 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 105 MSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999998 56665569999999999999999999999999999999999999999988777665 458999999999999
Q ss_pred CCchhhhcCCCcccceEeccccccCCcCChhhh---ccCCCcEEEccCCccccCCCccccccCC--CcEEEccCcccccc
Q 036229 239 QGEIPREFGNLAELELMALQVSNLQGEIPQELA---NLTGLEVLKLGKNFLTGEIPPEIHNLHN--LKLLDLSHNKLVGA 313 (982)
Q Consensus 239 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~ 313 (982)
++..|..|..+.+|+.++++++.+.+.....+. ..++|++|++++|.+++..|..|.+++. |++|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 999999999999999999999987643333221 3489999999999999999999998865 99999999999998
Q ss_pred CcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccc-----cccc----cccCCCCCCEEEeccccCc
Q 036229 314 VPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSG-----TIPR----FIFNASKLSVLELGRNSFS 384 (982)
Q Consensus 314 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~L~~N~i~ 384 (982)
.|..+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|...+ .+|. .+..+++|++|++++|+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFS-HSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECT-TTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred CcccccCcccccEeeCCCCccCccCh-hhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 89999999999999999999986544 344578999999999886553 2332 6788999999999999999
Q ss_pred cccCCccccCCccceecccccccccCcccccccccCCC--CccccEEEccCCCCCCCCCccccccccccccEEeccCCcc
Q 036229 385 GFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSN--CKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNV 462 (982)
Q Consensus 385 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l 462 (982)
+..+..|.++++|+.|++++|.+....... ..|.. .++|+.|++++|++.++.+... . ...+|++|++++|++
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~---~~f~~~~~~~L~~L~L~~n~l~~~~~~~~-~-~l~~L~~L~L~~N~l 417 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTN---ETFVSLAHSPLHILNLTKNKISKIESDAF-S-WLGHLEVLDLGLNEI 417 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECT---TTTGGGTTSCCCEEECTTSCCCEECTTTT-T-TCTTCCEEECCSSCC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcch---hhhcccccCcCceEECCCCCCCeEChhhh-h-CCCCCCEEeCCCCcC
Confidence 999999999999999999999854322211 12333 3589999999999998766432 2 246899999999999
Q ss_pred ccCCC-cccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCC--CCCCcccCCCccccEEEccCCcCCcCCC
Q 036229 463 SGGFP-KEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLE--GPIPDDICRLTKLYELGLSGNKLSGSIP 539 (982)
Q Consensus 463 ~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 539 (982)
++.+| ..|.++++|+.|++++|++++..+..|..+++|+.|++++|.++ +.+|..|..+++|+.|+|++|+|+++.|
T Consensus 418 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp EEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 98665 78999999999999999999999999999999999999999997 5789999999999999999999999888
Q ss_pred ccccCCCcccccccCCCcccccccc---------cccccCceEEecCCCcccCCCccccccccccceeeccccccccccc
Q 036229 540 ACFSNLASLGTLSLGSNKLTSIPLT---------IWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIP 610 (982)
Q Consensus 540 ~~~~~l~~L~~L~L~~N~l~~ip~~---------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p 610 (982)
..|.++++|++|+|++|+++.++.. +..+++|++|++++|+++...+..|.++++|+.|||++|+++++.+
T Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 577 (680)
T 1ziw_A 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred hhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCH
Confidence 9999999999999999999987432 5678999999999999997666789999999999999999999888
Q ss_pred ccccCccCcceEecccccccCCcccccc-CCCCCCeeeCCCCcCCCCCC
Q 036229 611 TVIGGLTNLQYLFLGYNRLQGSISESFG-DLISLKSLNLSNNNLSRSIP 658 (982)
Q Consensus 611 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p 658 (982)
..|..+++|+.|+|++|+|++.+|..|. .+++|+.|+|++|.+...-+
T Consensus 578 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred hHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 8899999999999999999999888888 79999999999999987544
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=5.6e-59 Score=582.94 Aligned_cols=534 Identities=21% Similarity=0.199 Sum_probs=365.7
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCcc-CccccCcCCCCccccccC
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAF-PSFIFNKSSLQHLDFSYN 163 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N 163 (982)
..+.++++++ .+|. ..++|+.|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 3456677777 5555 3467778888888877777777777777777777777665555 556777777777777777
Q ss_pred cccccCchhhhcCCCCCCeeeecceeeecccCCC--ccCcCcccEEEeeccccccccc-cccccccchhhhhccCCCCCC
Q 036229 164 ALSGEIPANICSNLPFLESISLSQNMFHGRIPSA--LSNCKYLEILSLSINNLLGAIP-KEIGNLTKLKELYLGYSGLQG 240 (982)
Q Consensus 164 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ 240 (982)
.+++..|..+ .++++|++|+|++|.+++.+|.. |+++++|++|+|++|++++..+ ..|+++++|++|+|++|.+++
T Consensus 84 ~l~~~~p~~~-~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 84 KIYFLHPDAF-QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCEECTTSS-CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred cCcccCHhHc-cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 7764434443 66777777777777776655443 6677777777777777765543 356666666666666666666
Q ss_pred chhhhcCCC--cccceEeccccccCCcCChhhhccCC------CcEEEccCCccccCCCcccccc---CCCcEEEccCcc
Q 036229 241 EIPREFGNL--AELELMALQVSNLQGEIPQELANLTG------LEVLKLGKNFLTGEIPPEIHNL---HNLKLLDLSHNK 309 (982)
Q Consensus 241 ~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~l~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~ 309 (982)
..+..+..+ ++|+.|+++.|.+.+..|..+..+++ |++|++++|.+++..+..+... .+++.|+++++.
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 656555555 55666666666665555554444433 5555555555555544444332 344444444332
Q ss_pred ccccCcccccCCCCCceeecCCCcCCCCcCcccc--ccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCcccc
Q 036229 310 LVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIAD--VQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFI 387 (982)
Q Consensus 310 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~ 387 (982)
+... ...|.+.+.. ...+ ...++|++|++++|.+.+..|..+..+++|+.|+|++|++++..
T Consensus 243 ~~~~---------------~~~~~l~~~~-~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 243 MGAG---------------FGFHNIKDPD-QNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp CBCS---------------SSCSSSTTGG-GTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC
T ss_pred cccc---------------ccccccCCCC-hhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC
Confidence 2110 0111111110 1111 12356777777777777666777777777777777777777777
Q ss_pred CCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCC
Q 036229 388 PNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFP 467 (982)
Q Consensus 388 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p 467 (982)
|..|..+++|+.|++++|.++.+... .|.++++|++|++++|+ +.+..+
T Consensus 307 ~~~~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~~L~~L~L~~N~--------------------------i~~~~~ 355 (844)
T 3j0a_A 307 DEAFYGLDNLQVLNLSYNLLGELYSS-----NFYGLPKVAYIDLQKNH--------------------------IAIIQD 355 (844)
T ss_dssp TTTTTTCSSCCEEEEESCCCSCCCSC-----SCSSCTTCCEEECCSCC--------------------------CCCCCS
T ss_pred hHHhcCCCCCCEEECCCCCCCccCHH-----HhcCCCCCCEEECCCCC--------------------------CCccCh
Confidence 77777777777666666666544322 35566666666666654 444455
Q ss_pred cccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCC-ccccCCC
Q 036229 468 KEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIP-ACFSNLA 546 (982)
Q Consensus 468 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~ 546 (982)
..|..+++|+.|+|++|.+++.. .+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+.+++
T Consensus 356 ~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~ 426 (844)
T 3j0a_A 356 QTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVP 426 (844)
T ss_dssp SCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCT
T ss_pred hhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCC
Confidence 66777888888888888887432 2678888888888888 44543 4568888888888876432 2355788
Q ss_pred cccccccCCCcccccccc--cccccCceEEecCCCccc-----CCCccccccccccceeecccccccccccccccCccCc
Q 036229 547 SLGTLSLGSNKLTSIPLT--IWNLKGMLYLNFSSNFFT-----GPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNL 619 (982)
Q Consensus 547 ~L~~L~L~~N~l~~ip~~--~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L 619 (982)
+|++|+|++|+++.++.. +..+++|++|++++|.++ +..+..+.++++|+.|||++|++++.+|..|+++++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 888888888888866543 445778888888888886 4455678999999999999999999999999999999
Q ss_pred ceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCC
Q 036229 620 QYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 620 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 684 (982)
++|+|++|+|++.+|..+. ++|+.|||++|+|++.+|..+. +|+.+++++|++.|.++..
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECELS 566 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSSCC
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccccH
Confidence 9999999999988887776 8999999999999999987764 6889999999999988754
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.6e-59 Score=564.05 Aligned_cols=536 Identities=22% Similarity=0.192 Sum_probs=364.1
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCc
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNA 164 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 164 (982)
.++.++.+++ .+|..+.. .+++|||++|.+++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 16 ~~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 16 TYNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANP 92 (606)
T ss_dssp EEECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCc
Confidence 3555666776 67766653 67888888888887777788888888888888888887777778778888888888777
Q ss_pred ccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhh
Q 036229 165 LSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPR 244 (982)
Q Consensus 165 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 244 (982)
+++..|..+ +++++|++|+|++|++++..|..|+++++|++|+|++|++++..+..+..+++|++|++++|++++..|.
T Consensus 93 l~~~~~~~~-~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 171 (606)
T 3t6q_A 93 LIFMAETAL-SGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKE 171 (606)
T ss_dssp CSEECTTTT-SSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHH
T ss_pred ccccChhhh-cccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChh
Confidence 774444443 6777777777777777766566677777777777777776653333333356666666666665554455
Q ss_pred hcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCC
Q 036229 245 EFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTL 324 (982)
Q Consensus 245 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 324 (982)
.|+.+++|+.+ .|++++|.+++..|..|.. .+|+.|++++|. ..+..+..+..+
T Consensus 172 ~~~~l~~L~~l----------------------~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~ 225 (606)
T 3t6q_A 172 DMSSLQQATNL----------------------SLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNS 225 (606)
T ss_dssp HHHTTTTCCSE----------------------EEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTC
T ss_pred hhhhhccccee----------------------EEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhcccc
Confidence 55555444400 4444555554444433332 345555555543 122222223222
Q ss_pred ceeecCCCcCCC----CcCccccccC--CCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccc
Q 036229 325 TGLGLQSNSLSG----SLSSIADVQL--PNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLR 398 (982)
Q Consensus 325 ~~L~L~~N~l~~----~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 398 (982)
+...+.-+.+.. .+....+..+ .+|++|++++|++++..+..|..+++|++|++++|+++ .+|..+..+++|+
T Consensus 226 ~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~ 304 (606)
T 3t6q_A 226 TIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLK 304 (606)
T ss_dssp EEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCC
T ss_pred chhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCC
Confidence 222221111110 1111111111 15667777777777666666667777777777777776 3455566666666
Q ss_pred eecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCC-cccccccccc
Q 036229 399 LMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFP-KEIGNLTNLI 477 (982)
Q Consensus 399 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p-~~~~~l~~L~ 477 (982)
.|++++|.++.... ..+..+++|++|++++|.+ .+.+| ..+..+++|+
T Consensus 305 ~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~n~~--------------------------~~~~~~~~~~~l~~L~ 353 (606)
T 3t6q_A 305 KLVLSANKFENLCQ-----ISASNFPSLTHLSIKGNTK--------------------------RLELGTGCLENLENLR 353 (606)
T ss_dssp EEECTTCCCSBGGG-----GCGGGCTTCSEEECCSCSS--------------------------CCBCCSSTTTTCTTCC
T ss_pred EEECccCCcCcCch-----hhhhccCcCCEEECCCCCc--------------------------ccccchhhhhccCcCC
Confidence 66666666654432 1345556666666666544 33233 3466777777
Q ss_pred eEEecCCCCCCCC--CccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCc-cccCCCcccccccC
Q 036229 478 GIYLGGNKLNGSI--PITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPA-CFSNLASLGTLSLG 554 (982)
Q Consensus 478 ~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~ 554 (982)
.|++++|++++.. |..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..|. .|.++++|++|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 7777777777655 66777777777777777777777777777777777777777777766544 37777777777777
Q ss_pred CCccccc-ccccccccCceEEecCCCcccC---CCccccccccccceeecccccccccccccccCccCcceEeccccccc
Q 036229 555 SNKLTSI-PLTIWNLKGMLYLNFSSNFFTG---PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQ 630 (982)
Q Consensus 555 ~N~l~~i-p~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 630 (982)
+|+++.+ |..+..+++|++|++++|++++ ..+..+..+++|+.|++++|++++..|..|+.+++|++|+|++|+++
T Consensus 434 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 513 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT 513 (606)
T ss_dssp TCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccC
Confidence 7777754 4455667778888888887775 23356888999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCC
Q 036229 631 GSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 631 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 683 (982)
+.+|.+|.++++| .|+|++|++++.+|..+..+++|++|++++|++.|.++.
T Consensus 514 ~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 514 SSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp GGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 9999999999999 999999999998888899999999999999999998874
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.8e-60 Score=571.22 Aligned_cols=504 Identities=19% Similarity=0.259 Sum_probs=325.5
Q ss_pred CCChhHHHHHHHHHHHhcCCCCc------cccCCCCCCCCCCce---eeEEecCCCCcEEEEEeCCCCccccCCccccCC
Q 036229 34 SSITTDQDALLALKAHITHDPTN------FLAKNWNTSTPVCNW---TGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNL 104 (982)
Q Consensus 34 ~~~~~~~~~ll~~k~~~~~~~~~------~~~~~w~~~~~~c~w---~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l 104 (982)
.....|+.||.+||+++..++.. ...++|+.+++||.| .||+|+ ..+||+.|+|++++++|.+|++++++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~-~~~~V~~L~L~~~~l~g~lp~~l~~L 104 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLN-SNGRVTGLSLEGFGASGRVPDAIGQL 104 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEEC-TTCCEEEEECTTSCCEEEECGGGGGC
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEc-CCCCEEEEEecCcccCCcCChHHhcC
Confidence 34457999999999998653211 123589999999999 999998 45899999999999999999999999
Q ss_pred CCCCEEEcCCCCc------cc------cCcchhhhccCCcEEEccCCcccCccCccccC-cCCCCccccccCcccccCch
Q 036229 105 SSLQSLNLGFNRL------SG------SIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFN-KSSLQHLDFSYNALSGEIPA 171 (982)
Q Consensus 105 ~~L~~L~L~~n~~------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~ip~ 171 (982)
++|++|||++|.+ .| .+|... +..|+ +++++|.+.+.+|..+.. +..+..+++....+..
T Consensus 105 ~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~---- 177 (636)
T 4eco_A 105 TELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK---- 177 (636)
T ss_dssp TTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC----
T ss_pred ccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc----
Confidence 9999999999976 33 556554 66777 899999999888887763 3455666666544431
Q ss_pred hhhcCCCCCCeeeec--ceeeecccCCCccCcCcccEEEeeccccccc-----------------cccccc--cccchhh
Q 036229 172 NICSNLPFLESISLS--QNMFHGRIPSALSNCKYLEILSLSINNLLGA-----------------IPKEIG--NLTKLKE 230 (982)
Q Consensus 172 ~~~~~l~~L~~L~Ls--~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~ 230 (982)
.....++.+.+. +|++++ +|.+|+++++|++|+|++|++++. +|..++ ++++|++
T Consensus 178 ---~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~ 253 (636)
T 4eco_A 178 ---SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTD 253 (636)
T ss_dssp ---CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred ---ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCE
Confidence 122334444443 578888 888888888888888888888875 777777 7777777
Q ss_pred hhccCCCCCCchhhhcCCCcccceEeccccc-cCC-cCChhhhcc------CCCcEEEccCCccccCCCc--cccccCCC
Q 036229 231 LYLGYSGLQGEIPREFGNLAELELMALQVSN-LQG-EIPQELANL------TGLEVLKLGKNFLTGEIPP--EIHNLHNL 300 (982)
Q Consensus 231 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~-~~p~~l~~l------~~L~~L~Ls~N~l~~~~p~--~~~~l~~L 300 (982)
|+|++|++.+.+|..|+++++|+.|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .|.++++|
T Consensus 254 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 254 VEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp EEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred EEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 7777777777777777777777777777776 776 677776665 77777777777777 5666 67777777
Q ss_pred cEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCC-CCEEEec
Q 036229 301 KLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASK-LSVLELG 379 (982)
Q Consensus 301 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~ 379 (982)
++|+|++|+++|.+| .+..+++| ++|++++|+++ .+|..+..+++ |++|+++
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L-------------------------~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls 385 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKL-------------------------ASLNLAYNQIT-EIPANFCGFTEQVENLSFA 385 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEE-------------------------SEEECCSSEEE-ECCTTSEEECTTCCEEECC
T ss_pred CEEeCcCCcCccchh-hhCCCCCC-------------------------CEEECCCCccc-cccHhhhhhcccCcEEEcc
Confidence 777777777776666 55444444 66666666665 55666666666 7777777
Q ss_pred cccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccC
Q 036229 380 RNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSY 459 (982)
Q Consensus 380 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~ 459 (982)
+|+++ .+|..+..++ +++|++|++++|++.
T Consensus 386 ~N~l~-~lp~~~~~~~---------------------------l~~L~~L~Ls~N~l~---------------------- 415 (636)
T 4eco_A 386 HNKLK-YIPNIFDAKS---------------------------VSVMSAIDFSYNEIG---------------------- 415 (636)
T ss_dssp SSCCS-SCCSCCCTTC---------------------------SSCEEEEECCSSCTT----------------------
T ss_pred CCcCc-ccchhhhhcc---------------------------cCccCEEECcCCcCC----------------------
Confidence 77766 3344333221 123334444444333
Q ss_pred CccccCCCcccc-------cccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcc-cCCC-------ccc
Q 036229 460 CNVSGGFPKEIG-------NLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDD-ICRL-------TKL 524 (982)
Q Consensus 460 n~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-------~~L 524 (982)
+..|..+. .+++|+.|+|++|+++...+..+..+++|++|+|++|+|+ .+|.. +... ++|
T Consensus 416 ----~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 416 ----SVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp ----TTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC
T ss_pred ----CcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc
Confidence 33333333 4556677777777776544445556677777777777776 33332 2222 255
Q ss_pred cEEEccCCcCCcCCCcccc--CCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeeccc
Q 036229 525 YELGLSGNKLSGSIPACFS--NLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFST 602 (982)
Q Consensus 525 ~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~ 602 (982)
+.|+|++|+|+ .+|..+. .+++|++|+|++|+++.+|..++.+++|++|++++|+ ++++
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~------------------~ls~ 551 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQR------------------DAQG 551 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCB------------------CTTC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCc------------------cccc
Confidence 55555555555 3444443 5555555555555555555555555555555554443 2344
Q ss_pred ccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCC
Q 036229 603 NNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLS 654 (982)
Q Consensus 603 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 654 (982)
|++.+.+|..++.+++|++|+|++|++ +.+|..+. ++|+.|||++|++.
T Consensus 552 N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 552 NRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred CcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 555555555555555555555555555 34444433 34555555555443
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.5e-58 Score=558.34 Aligned_cols=535 Identities=19% Similarity=0.183 Sum_probs=384.3
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCc
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNA 164 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 164 (982)
.++.++++++ .+|..+. ++|++|||++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 4667777787 6776654 788888888888887777788888888888888888887777778888888888888888
Q ss_pred ccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccc-ccccccccccchhhhhccCCCCCCchh
Q 036229 165 LSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLG-AIPKEIGNLTKLKELYLGYSGLQGEIP 243 (982)
Q Consensus 165 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~ 243 (982)
+++..|..+ .++++|++|+|++|++++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++++..|
T Consensus 92 l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~ 170 (606)
T 3vq2_A 92 IQSFSPGSF-SGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITV 170 (606)
T ss_dssp CCCCCTTSS-TTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECT
T ss_pred ccccChhhc-CCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecCh
Confidence 874444444 777777777777777777666777777777777777777765 456677777777777777777766555
Q ss_pred hhcCCCcccc----eEeccccccCCcCChhhhccCCCcEEEccCCccc-cCCCccccccCCCcEEEccCccccccCcccc
Q 036229 244 REFGNLAELE----LMALQVSNLQGEIPQELANLTGLEVLKLGKNFLT-GEIPPEIHNLHNLKLLDLSHNKLVGAVPATI 318 (982)
Q Consensus 244 ~~~~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 318 (982)
..|+.+++|+ .+++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+...
T Consensus 171 ~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~--- 246 (606)
T 3vq2_A 171 NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERN--- 246 (606)
T ss_dssp TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCC---
T ss_pred hhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCc---
Confidence 5555554443 45555555543333333322 4555555555443 2333444444444444444333321100
Q ss_pred cCCCCCceeecCCCcCCCCcCccccc--cCCCccEEEc-cCCcccccccccccCCCCCCEEEeccccCccccCCccccCC
Q 036229 319 FNMSTLTGLGLQSNSLSGSLSSIADV--QLPNLEELRL-WSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLR 395 (982)
Q Consensus 319 ~~l~~L~~L~L~~N~l~~~~~~~~~~--~l~~L~~L~L-s~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 395 (982)
+. .+....+. .--.++.+++ ..|.+.+.+|. +..+++|+.|++++|.+... | .+..++
T Consensus 247 -----l~-----------~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~ 307 (606)
T 3vq2_A 247 -----LE-----------IFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIKYL-E-DVPKHF 307 (606)
T ss_dssp -----CS-----------CCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCCCC-C-CCCTTC
T ss_pred -----cc-----------ccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccchhh-h-hccccc
Confidence 00 00000000 0113455666 56666666665 66677777777777777643 3 566666
Q ss_pred ccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccc
Q 036229 396 NLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTN 475 (982)
Q Consensus 396 ~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~ 475 (982)
+|+.|++++|.++.++ .+ .+++|++|++++| +..+.. .+..+++
T Consensus 308 ~L~~L~l~~n~l~~lp-------~~-~l~~L~~L~l~~n--------------------------~~~~~~--~~~~l~~ 351 (606)
T 3vq2_A 308 KWQSLSIIRCQLKQFP-------TL-DLPFLKSLTLTMN--------------------------KGSISF--KKVALPS 351 (606)
T ss_dssp CCSEEEEESCCCSSCC-------CC-CCSSCCEEEEESC--------------------------SSCEEC--CCCCCTT
T ss_pred cCCEEEcccccCcccc-------cC-CCCccceeeccCC--------------------------cCccch--hhccCCC
Confidence 6666666666664433 12 4555555555555 322222 4567788
Q ss_pred cceEEecCCCCCCC--CCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCC-ccccCCCcccccc
Q 036229 476 LIGIYLGGNKLNGS--IPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIP-ACFSNLASLGTLS 552 (982)
Q Consensus 476 L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ 552 (982)
|+.|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++++..| ..|.++++|++|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 88888888888866 37888888899999999998885 56788888999999999999988777 6788899999999
Q ss_pred cCCCcccc-cccccccccCceEEecCCCcccC-CCccccccccccceeecccccccccccccccCccCcceEeccccccc
Q 036229 553 LGSNKLTS-IPLTIWNLKGMLYLNFSSNFFTG-PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQ 630 (982)
Q Consensus 553 L~~N~l~~-ip~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 630 (982)
+++|+++. +|..+..+++|++|++++|++++ .+|..++.+++|+.||+++|++++.+|..|+.+++|++|+|++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 99999885 56667788899999999999987 47888999999999999999999999999999999999999999999
Q ss_pred CCccccccCCCCCCeeeCCCCcCCCCCCccccccc-ccceeecCCCcccccCCCC
Q 036229 631 GSISESFGDLISLKSLNLSNNNLSRSIPISLEKLS-YLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 631 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~l~ls~N~l~~~~p~~ 684 (982)
+.+|..|+++++|++|||++|+|+ .+|..+..++ +|++|++++|++.|.+|..
T Consensus 511 ~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 511 FLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp CEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 999999999999999999999998 6787899987 5999999999999988864
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.9e-58 Score=557.84 Aligned_cols=516 Identities=19% Similarity=0.182 Sum_probs=408.9
Q ss_pred cEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccc
Q 036229 82 RVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFS 161 (982)
Q Consensus 82 ~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 161 (982)
.++.|+|++|.+++..|..++++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 68999999999998889999999999999999999998889999999999999999999999899999999999999999
Q ss_pred cCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchh--hhhccCCCCC
Q 036229 162 YNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLK--ELYLGYSGLQ 239 (982)
Q Consensus 162 ~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~--~L~L~~N~l~ 239 (982)
+|.++ .+++..+.++++|++|+|++|++++..+..+.++++|++|++++|++++..|..|+.+++|+ +|++++|+++
T Consensus 114 ~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 114 QTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred ccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999 45444459999999999999999986655666699999999999999988899999999999 8999999999
Q ss_pred CchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCcccc-----CCCccccccC--CCcEEEccCccccc
Q 036229 240 GEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTG-----EIPPEIHNLH--NLKLLDLSHNKLVG 312 (982)
Q Consensus 240 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~--~L~~L~Ls~N~l~~ 312 (982)
+..|..|.. .+|+.|++++|. ..+..+.++.++....+..+.+.. ..+..|..+. +|+.|++++|++++
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~ 268 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFN 268 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSS
T ss_pred ccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCc
Confidence 888877765 689999999987 456677777777666655444332 2233344443 57777777777776
Q ss_pred cCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccc
Q 036229 313 AVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFG 392 (982)
Q Consensus 313 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 392 (982)
..+..+..+++|+.|++++|.++ .+|..+..+++|++|++++|++++..|..+.
T Consensus 269 ~~~~~~~~l~~L~~L~l~~n~l~--------------------------~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 322 (606)
T 3t6q_A 269 ISSNTFHCFSGLQELDLTATHLS--------------------------ELPSGLVGLSTLKKLVLSANKFENLCQISAS 322 (606)
T ss_dssp CCTTTTTTCTTCSEEECTTSCCS--------------------------CCCSSCCSCTTCCEEECTTCCCSBGGGGCGG
T ss_pred cCHHHhccccCCCEEeccCCccC--------------------------CCChhhcccccCCEEECccCCcCcCchhhhh
Confidence 66666666666655555555554 3444444555555555555555555455555
Q ss_pred cCCccceecccccccc-cCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccc
Q 036229 393 NLRNLRLMTLHYNYLT-SSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIG 471 (982)
Q Consensus 393 ~l~~L~~L~L~~N~l~-~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~ 471 (982)
.+++|+.|++++|.+. .++. ..|..+++|++|++++|++.++. ..|..+.
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~------------------------~~~~~~~ 373 (606)
T 3t6q_A 323 NFPSLTHLSIKGNTKRLELGT-----GCLENLENLRELDLSHDDIETSD------------------------CCNLQLR 373 (606)
T ss_dssp GCTTCSEEECCSCSSCCBCCS-----STTTTCTTCCEEECCSSCCCEEE------------------------ESTTTTT
T ss_pred ccCcCCEEECCCCCcccccch-----hhhhccCcCCEEECCCCcccccc------------------------Ccchhcc
Confidence 5555555555555443 1111 12555666667777776554321 1245677
Q ss_pred cccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcc-cCCCccccEEEccCCcCCcCCCccccCCCcccc
Q 036229 472 NLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDD-ICRLTKLYELGLSGNKLSGSIPACFSNLASLGT 550 (982)
Q Consensus 472 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 550 (982)
.+++|+.|++++|++++..|..|..+++|++|++++|++++..|.. +..+++|+.|++++|++++..|..|.++++|++
T Consensus 374 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 453 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQH 453 (606)
T ss_dssp TCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCE
T ss_pred cCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCE
Confidence 7788888888888888888888888888888888888888766544 788888888888888888888888888888888
Q ss_pred cccCCCcccc--cc--cccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccc
Q 036229 551 LSLGSNKLTS--IP--LTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGY 626 (982)
Q Consensus 551 L~L~~N~l~~--ip--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~ 626 (982)
|+|++|+++. +| ..+..+++|++|++++|++++..|..++++++|+.||+++|++++..|..+..+++| +|+|++
T Consensus 454 L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~ 532 (606)
T 3t6q_A 454 LNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLAS 532 (606)
T ss_dssp EECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCS
T ss_pred EECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcC
Confidence 8888888874 23 456778899999999999998889999999999999999999999999999999999 999999
Q ss_pred ccccCCccccccCCCCCCeeeCCCCcCCCCCC
Q 036229 627 NRLQGSISESFGDLISLKSLNLSNNNLSRSIP 658 (982)
Q Consensus 627 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 658 (982)
|++++.+|..|..+++|+.|++++|.+++..+
T Consensus 533 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 533 NHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp SCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999987655
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.3e-58 Score=568.19 Aligned_cols=517 Identities=21% Similarity=0.246 Sum_probs=331.0
Q ss_pred cCCCChhHHHHHHHHHHHhcCCCCccccCCCCCCC-----CC--Cce------------eeEEecCCCCcEEEEEeCCCC
Q 036229 32 NTSSITTDQDALLALKAHITHDPTNFLAKNWNTST-----PV--CNW------------TGVTCDVHSHRVKVLNISHLN 92 (982)
Q Consensus 32 ~~~~~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~gv~c~~~~~~v~~L~l~~~~ 92 (982)
.+.+..+|++||++||+++.+ + +|+.+. +| |+| .||+|+ ..+||+.|+|++++
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~--~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~-~~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDG--K-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLD-NNGRVTGLSLAGFG 334 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTG--G-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEEC-TTSCEEEEECTTTC
T ss_pred ccccchHHHHHHHHHHHHcCC--C-----CCCcCCCcccccCCccccccccccccccCcCceEec-CCCCEEEEECccCC
Confidence 345567899999999999954 2 787554 55 999 999999 46899999999999
Q ss_pred ccccCCccccCCCCCCEEEc-CCCCccccCcchhhhc---------cCCcEEE-------ccCCcccCcc----------
Q 036229 93 LTGTIPSQLWNLSSLQSLNL-GFNRLSGSIPSAIFTL---------YTLKYVN-------FRGNQLSGAF---------- 145 (982)
Q Consensus 93 l~g~~~~~l~~l~~L~~L~L-~~n~~~~~~p~~~~~l---------~~L~~L~-------Ls~N~l~~~~---------- 145 (982)
+.|.+|+++++|++|+.||| ++|.++|..|...... ..++... .....+++.+
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 8899988755331111 0000000 0001111111
Q ss_pred -CccccCcCCCCcccccc--CcccccCchhhhcCCCCCCeeeecceeeec-----------------ccCCCcc--CcCc
Q 036229 146 -PSFIFNKSSLQHLDFSY--NALSGEIPANICSNLPFLESISLSQNMFHG-----------------RIPSALS--NCKY 203 (982)
Q Consensus 146 -p~~~~~l~~L~~L~Ls~--N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~ 203 (982)
+....+...++.+.++. |.+++ ||..+ +++++|++|+|++|++++ .+|..++ ++++
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l-~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAI-QRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGG-GGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred cccccccccchhhceeccccCcccc-hhHHH-hcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 11122334555565654 88887 88876 789999999999999987 2555554 5555
Q ss_pred ccEEEeeccccccccccccccccchhhhhccCCC-CCC-chhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEc
Q 036229 204 LEILSLSINNLLGAIPKEIGNLTKLKELYLGYSG-LQG-EIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKL 281 (982)
Q Consensus 204 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 281 (982)
|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+++++ ..+..+++|++|+|
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~-----------------~~~~~l~~L~~L~L 555 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA-----------------DDEDTGPKIQIFYM 555 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH-----------------HCTTTTTTCCEEEC
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh-----------------hcccccCCccEEEe
Confidence 6666666555555555555555555555555555 554 4554443332 01122336777777
Q ss_pred cCCccccCCCc--cccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcc
Q 036229 282 GKNFLTGEIPP--EIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNF 359 (982)
Q Consensus 282 s~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 359 (982)
++|+++ .+|. .|.++++|++|+|++|+++ .+| .+..+++| ++|+|++|++
T Consensus 556 s~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L-------------------------~~L~Ls~N~l 607 (876)
T 4ecn_A 556 GYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL-------------------------TDLKLDYNQI 607 (876)
T ss_dssp CSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE-------------------------SEEECCSSCC
T ss_pred eCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc-------------------------eEEECcCCcc
Confidence 777776 5565 6777777777777777776 555 44444444 4444444444
Q ss_pred cccccccccCCCC-CCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCC
Q 036229 360 SGTIPRFIFNASK-LSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDG 438 (982)
Q Consensus 360 ~~~~p~~~~~l~~-L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 438 (982)
+ .+|..+..+++ |++|+|++|+++ .+|..+..++. ++|+.|+|++|++.+
T Consensus 608 ~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~---------------------------~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 608 E-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSV---------------------------YVMGSVDFSYNKIGS 658 (876)
T ss_dssp S-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCS---------------------------SCEEEEECCSSCTTT
T ss_pred c-cchHHHhhccccCCEEECcCCCCC-cCchhhhcccc---------------------------CCCCEEECcCCcCCC
Confidence 4 45555555665 666666666665 33443332211 123344444444433
Q ss_pred CCCccccccccccccEEeccCCccccCCCcccc--cccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCc
Q 036229 439 ILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIG--NLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPD 516 (982)
Q Consensus 439 ~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 516 (982)
..|.. |..+. .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+|+ .+|.
T Consensus 659 ~ip~l-----------------------~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 659 EGRNI-----------------------SCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp TSSSC-----------------------SSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred ccccc-----------------------hhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 22211 01111 2235666666666666333333446677777777777776 3443
Q ss_pred ccC--------CCccccEEEccCCcCCcCCCcccc--CCCcccccccCCCcccccccccccccCceEEecCCCcccCCCc
Q 036229 517 DIC--------RLTKLYELGLSGNKLSGSIPACFS--NLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLP 586 (982)
Q Consensus 517 ~~~--------~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~ 586 (982)
.+. ++++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|+++.+|..++.+++|+.|+|++|+
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~------ 787 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR------ 787 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB------
T ss_pred HHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC------
Confidence 322 2237777777777777 5666665 7777777777777777777777777777777777775
Q ss_pred cccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccc
Q 036229 587 LDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSY 666 (982)
Q Consensus 587 ~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 666 (982)
++++|++.+.+|..|+.+++|++|+|++|+| +.+|..+. ++|+.|||++|++....+..+.....
T Consensus 788 ------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~ 852 (876)
T 4ecn_A 788 ------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIE 852 (876)
T ss_dssp ------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHH
T ss_pred ------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHcccccc
Confidence 5677888888888888888888888888888 57777765 58888888888887666666666666
Q ss_pred cceeecCCCccc
Q 036229 667 LEDLDLSFNKLK 678 (982)
Q Consensus 667 L~~l~ls~N~l~ 678 (982)
+..+.|++|++.
T Consensus 853 ~~~~~L~~n~~~ 864 (876)
T 4ecn_A 853 AGMYVLLYDKTQ 864 (876)
T ss_dssp TTCCEEECCTTS
T ss_pred chheeecCCCcc
Confidence 777777777665
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.8e-56 Score=542.12 Aligned_cols=512 Identities=21% Similarity=0.196 Sum_probs=413.5
Q ss_pred CcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCcccc
Q 036229 81 HRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDF 160 (982)
Q Consensus 81 ~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 160 (982)
.+++.|+|++|.+++..+..+.++++|++|||++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46899999999999888889999999999999999999888889999999999999999999888999999999999999
Q ss_pred ccCcccccCchhhhcCCCCCCeeeecceeeec-ccCCCccCcCcccEEEeeccccccccccccccccchh----hhhccC
Q 036229 161 SYNALSGEIPANICSNLPFLESISLSQNMFHG-RIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLK----ELYLGY 235 (982)
Q Consensus 161 s~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~L~~ 235 (982)
++|.++ .+|+..++++++|++|+|++|++++ .+|..|+++++|++|+|++|++++..|..++.+++|+ +|++++
T Consensus 112 ~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLA-SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCC-CSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccc-cccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 999998 4554445999999999999999986 5799999999999999999999998888999988876 799999
Q ss_pred CCCCCchhhhcCCCcccceEeccccccC-CcCChhhhccCCCcEEEccCCccccC------CCccccccC--CCcEEEc-
Q 036229 236 SGLQGEIPREFGNLAELELMALQVSNLQ-GEIPQELANLTGLEVLKLGKNFLTGE------IPPEIHNLH--NLKLLDL- 305 (982)
Q Consensus 236 N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~------~p~~~~~l~--~L~~L~L- 305 (982)
|.+++..+..+... +|+.|++++|.+. +..|..+.++++|+.+++..+.+.+. .+..+.++. .++.+++
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 99997777766665 9999999999987 45678899999999999976665432 111122221 2344444
Q ss_pred cCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCcc
Q 036229 306 SHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSG 385 (982)
Q Consensus 306 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 385 (982)
..|.+.+..|. +. .+++|+.|++++|.+.. +| .+..+++|++|++++|++ +
T Consensus 270 ~~~~~~~~~~~-~~-------------------------~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~ 320 (606)
T 3vq2_A 270 YTNDFSDDIVK-FH-------------------------CLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-K 320 (606)
T ss_dssp CCTTCCGGGGS-CG-------------------------GGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-S
T ss_pred ccccccccccc-cc-------------------------cCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-c
Confidence 44444444443 44 44555666666666653 34 566666777777777777 3
Q ss_pred ccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccC
Q 036229 386 FIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGG 465 (982)
Q Consensus 386 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~ 465 (982)
.+| .+ .+++|+.|++++|..... ..+..+++|++|++++|++++. +.
T Consensus 321 ~lp-~~-~l~~L~~L~l~~n~~~~~-------~~~~~l~~L~~L~ls~n~l~~~------------------------~~ 367 (606)
T 3vq2_A 321 QFP-TL-DLPFLKSLTLTMNKGSIS-------FKKVALPSLSYLDLSRNALSFS------------------------GC 367 (606)
T ss_dssp SCC-CC-CCSSCCEEEEESCSSCEE-------CCCCCCTTCCEEECCSSCEEEE------------------------EE
T ss_pred ccc-cC-CCCccceeeccCCcCccc-------hhhccCCCCCEEECcCCccCCC------------------------cc
Confidence 445 33 677777777777733210 1355666777777777644321 01
Q ss_pred CCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCC-cccCCCccccEEEccCCcCCcCCCccccC
Q 036229 466 FPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIP-DDICRLTKLYELGLSGNKLSGSIPACFSN 544 (982)
Q Consensus 466 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 544 (982)
.|..+..+++|+.|++++|.+++ +|..|..+++|+.|++++|++++..| ..+..+++|++|++++|++++..|..|.+
T Consensus 368 ~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 446 (606)
T 3vq2_A 368 CSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLG 446 (606)
T ss_dssp CCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred hhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcC
Confidence 35667778888888888888875 55788888899999999999888777 67888899999999999998888888999
Q ss_pred CCcccccccCCCcccc--cccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceE
Q 036229 545 LASLGTLSLGSNKLTS--IPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYL 622 (982)
Q Consensus 545 l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L 622 (982)
+++|++|++++|+++. +|..+..+++|++|++++|++++..|..++++++|+.|++++|++++.+|..|+.+++|++|
T Consensus 447 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 526 (606)
T 3vq2_A 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526 (606)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEE
Confidence 9999999999999885 67778888999999999999998888999999999999999999999999999999999999
Q ss_pred ecccccccCCccccccCCC-CCCeeeCCCCcCCCCCC
Q 036229 623 FLGYNRLQGSISESFGDLI-SLKSLNLSNNNLSRSIP 658 (982)
Q Consensus 623 ~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p 658 (982)
+|++|+|+ .+|..+..++ +|+.|++++|.+....+
T Consensus 527 ~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 527 DCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp ECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 99999999 6777799997 69999999999987555
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-55 Score=550.29 Aligned_cols=534 Identities=23% Similarity=0.252 Sum_probs=451.1
Q ss_pred CEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecc
Q 036229 108 QSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQ 187 (982)
Q Consensus 108 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~ 187 (982)
+..|.++++++ .+|. -.++|++|+|++|.+++..|..|.++++|++|||++|...+.+++..|.++++|++|+|++
T Consensus 7 ~~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~ 82 (844)
T 3j0a_A 7 RIAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGS 82 (844)
T ss_dssp EEEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTT
T ss_pred eEEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCC
Confidence 36788888887 7786 5689999999999999988999999999999999999887788777779999999999999
Q ss_pred eeeecccCCCccCcCcccEEEeeccccccccccc--cccccchhhhhccCCCCCCchh-hhcCCCcccceEeccccccCC
Q 036229 188 NMFHGRIPSALSNCKYLEILSLSINNLLGAIPKE--IGNLTKLKELYLGYSGLQGEIP-REFGNLAELELMALQVSNLQG 264 (982)
Q Consensus 188 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~ 264 (982)
|.+.+..|++|+++++|++|+|++|++++.+|.. |+++++|++|+|++|.+++..+ ..|+++++|+.|++++|.+++
T Consensus 83 N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 83 SKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFL 162 (844)
T ss_dssp CCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCC
T ss_pred CcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCe
Confidence 9999999999999999999999999999877665 9999999999999999988765 679999999999999999999
Q ss_pred cCChhhhcc--CCCcEEEccCCccccCCCccccccCC------CcEEEccCccccccCcccccCC---CCCceeecCCCc
Q 036229 265 EIPQELANL--TGLEVLKLGKNFLTGEIPPEIHNLHN------LKLLDLSHNKLVGAVPATIFNM---STLTGLGLQSNS 333 (982)
Q Consensus 265 ~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~ 333 (982)
..|..+..+ ++|+.|+++.|.+++..|..+..+++ |+.|++++|.+++..|..+... ..++.+.++.+.
T Consensus 163 ~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 163 VCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp CCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred eCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 999998888 89999999999999888887777665 9999999999988877776543 456666666444
Q ss_pred CCCCcCccccccCCCccEEEccCCcccccccccccCC--CCCCEEEeccccCccccCCccccCCccceecccccccccCc
Q 036229 334 LSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNA--SKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSN 411 (982)
Q Consensus 334 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 411 (982)
+.. .++.|++.+..+..|.++ ++|+.|++++|.+.+..+..|..+++|+.|++++|.++.+.
T Consensus 243 ~~~----------------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 306 (844)
T 3j0a_A 243 MGA----------------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA 306 (844)
T ss_dssp CBC----------------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEEC
T ss_pred ccc----------------cccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCC
Confidence 321 123455555555555554 68999999999998888888888888888888888877654
Q ss_pred ccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCC
Q 036229 412 LELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIP 491 (982)
Q Consensus 412 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 491 (982)
.. .|.++++|++|+|++| ++++..|..|..+++|+.|++++|++++..+
T Consensus 307 ~~-----~~~~l~~L~~L~Ls~N--------------------------~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 355 (844)
T 3j0a_A 307 DE-----AFYGLDNLQVLNLSYN--------------------------LLGELYSSNFYGLPKVAYIDLQKNHIAIIQD 355 (844)
T ss_dssp TT-----TTTTCSSCCEEEEESC--------------------------CCSCCCSCSCSSCTTCCEEECCSCCCCCCCS
T ss_pred hH-----HhcCCCCCCEEECCCC--------------------------CCCccCHHHhcCCCCCCEEECCCCCCCccCh
Confidence 32 3666777777777666 4445567788899999999999999999999
Q ss_pred ccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccc--ccccc
Q 036229 492 ITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLT--IWNLK 569 (982)
Q Consensus 492 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~--~~~l~ 569 (982)
..|..+++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..+++.|++++|+++.++.. +..++
T Consensus 356 ~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~ 426 (844)
T 3j0a_A 356 QTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVP 426 (844)
T ss_dssp SCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCT
T ss_pred hhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCC
Confidence 9999999999999999999853 23889999999999998 45543 46789999999999987653 45899
Q ss_pred CceEEecCCCcccCCCcc-ccccccccceeeccccccc-----ccccccccCccCcceEecccccccCCccccccCCCCC
Q 036229 570 GMLYLNFSSNFFTGPLPL-DIGNLKVLIGIDFSTNNFS-----DVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISL 643 (982)
Q Consensus 570 ~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~Ldls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 643 (982)
+|++|++++|++++..+. .+..+++|+.|++++|.++ +..|..|.++++|++|+|++|+|++.+|..|.++++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 999999999999976554 4667899999999999997 4556779999999999999999999999999999999
Q ss_pred CeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCCCCCCCCCCcccccCcccCCCC
Q 036229 644 KSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 644 ~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
+.|+|++|+|++..|..+. ++|+.|||++|++++.+|.. +..+....+.|||+.|+.+
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 9999999999987777666 88999999999999998864 5566777889999999654
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.1e-53 Score=511.41 Aligned_cols=502 Identities=20% Similarity=0.237 Sum_probs=348.2
Q ss_pred CCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCc
Q 036229 68 VCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPS 147 (982)
Q Consensus 68 ~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 147 (982)
.|.|.|+ |+. ++++++ .+|+.+. ++|++|||++|++++..|.++.++++|++|+|++|++++..|.
T Consensus 3 ~C~~~~~-c~~----------~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~ 68 (549)
T 2z81_A 3 SCDASGV-CDG----------RSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD 68 (549)
T ss_dssp EECTTSE-EEC----------TTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTT
T ss_pred cCCCCce-EEC----------CCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChh
Confidence 4999998 973 456666 7777665 7999999999999988889999999999999999999988889
Q ss_pred cccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeec-ccCCCccCcCcccEEEeeccccccccc-cccccc
Q 036229 148 FIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHG-RIPSALSNCKYLEILSLSINNLLGAIP-KEIGNL 225 (982)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 225 (982)
.|+++++|++|||++|.+++ +|+..|+++++|++|+|++|++++ ..|..|+++++|++|++++|++.+.+| ..|.++
T Consensus 69 ~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l 147 (549)
T 2z81_A 69 AFYSLGSLEHLDLSDNHLSS-LSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGL 147 (549)
T ss_dssp TTTTCTTCCEEECTTSCCCS-CCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTC
T ss_pred hccccccCCEEECCCCccCc-cCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcc
Confidence 99999999999999999994 555555899999999999999987 357789999999999999998555555 578899
Q ss_pred cchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChh-hhccCCCcEEEccCCccccCC--C-ccccccCCCc
Q 036229 226 TKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQE-LANLTGLEVLKLGKNFLTGEI--P-PEIHNLHNLK 301 (982)
Q Consensus 226 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~ 301 (982)
++|++|++++|++++..|..++.+++|+.|+++.|.+.. +|.. +..+++|++|++++|++++.. | .....+++|+
T Consensus 148 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~ 226 (549)
T 2z81_A 148 TSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMK 226 (549)
T ss_dssp CEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCC
T ss_pred cccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhccc
Confidence 999999999999988888888888888888888888764 3443 456788888888888887642 1 2233456666
Q ss_pred EEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccc
Q 036229 302 LLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRN 381 (982)
Q Consensus 302 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 381 (982)
.|++++|.+++..+..+.. .+..+++|+.+++++|
T Consensus 227 ~L~l~~n~l~~~~~~~l~~---------------------------------------------~~~~~~~L~~l~l~~~ 261 (549)
T 2z81_A 227 KLAFRGSVLTDESFNELLK---------------------------------------------LLRYILELSEVEFDDC 261 (549)
T ss_dssp EEEEESCEEEHHHHHHHHG---------------------------------------------GGGGCTTCCEEEEESC
T ss_pred ceeccccccchhHHHHHHH---------------------------------------------Hhhhhccccccccccc
Confidence 6777666665543332211 1122233334444443
Q ss_pred cCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCc
Q 036229 382 SFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCN 461 (982)
Q Consensus 382 ~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~ 461 (982)
.+.+...- +... ...+..+.+|+.|+++++.+..... +
T Consensus 262 ~~~~~~~~-----~~~~------------------~~~~~~l~~L~~L~l~~~~i~~~~~---~---------------- 299 (549)
T 2z81_A 262 TLNGLGDF-----NPSE------------------SDVVSELGKVETVTIRRLHIPQFYL---F---------------- 299 (549)
T ss_dssp EEECCSCC-----CCCT------------------TTCCCCCTTCCEEEEESCBCSCGGG---S----------------
T ss_pred cccccccc-----cccc------------------hhhhhhhcccccccccccccchhhh---c----------------
Confidence 33321100 0000 0012223344444444443322100 0
Q ss_pred cccCCCcccccccccceEEecCCCCCCCCCccc-cCcCCCCeEEeeccCCCCCCC---cccCCCccccEEEccCCcCCcC
Q 036229 462 VSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITL-GKLQKLQGLHLEDNKLEGPIP---DDICRLTKLYELGLSGNKLSGS 537 (982)
Q Consensus 462 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~ 537 (982)
...+..+...++|+.|++++|+++ .+|..+ ..+++|++|+|++|++++.+| ..+..+++|++|+|++|+|++.
T Consensus 300 --~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 376 (549)
T 2z81_A 300 --YDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSM 376 (549)
T ss_dssp --CCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCH
T ss_pred --ccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccccc
Confidence 001112223345566666666665 334333 456666666666666665443 2355566666666666666644
Q ss_pred CC--ccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccC
Q 036229 538 IP--ACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGG 615 (982)
Q Consensus 538 ~p--~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~ 615 (982)
.+ ..+..+++|++|+|++|+++.+|..+..+++|++|++++|++++. |..+ .++|+.||+++|++++.+ +.
T Consensus 377 ~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~ 449 (549)
T 2z81_A 377 QKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LF 449 (549)
T ss_dssp HHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CC
T ss_pred ccchhhhhcCCCCCEEECCCCCCccCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----cc
Confidence 32 346666677777777777776666666666777777777776632 2222 146788888888887753 56
Q ss_pred ccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCC
Q 036229 616 LTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 616 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 684 (982)
+++|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|..+..+++|++|++++|++.|.+|..
T Consensus 450 l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 516 (549)
T 2z81_A 450 LPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 516 (549)
T ss_dssp CTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHH
T ss_pred CChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccH
Confidence 889999999999998 5665 467899999999999999988888999999999999999999998853
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.1e-53 Score=506.85 Aligned_cols=537 Identities=22% Similarity=0.234 Sum_probs=399.8
Q ss_pred CCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeec
Q 036229 107 LQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLS 186 (982)
Q Consensus 107 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls 186 (982)
...++-++.+++ .+|..+. +++++|+|++|++++..+..|.++++|++|||++|.++ .+++..|.++++|++|+|+
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~-~i~~~~~~~l~~L~~L~L~ 84 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILT 84 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCC-EECTTTTTTCTTCCEEECT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCC-ccCcccccCchhCCEEeCc
Confidence 356777777776 6777553 57999999999999877888999999999999999988 5666666899999999999
Q ss_pred ceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCC-chhhhcCCCcccceEeccccccCCc
Q 036229 187 QNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQG-EIPREFGNLAELELMALQVSNLQGE 265 (982)
Q Consensus 187 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~ 265 (982)
+|++++..|.+|+++++|++|++++|++++..+..++++++|++|++++|.+++ .+|..|+++++|+.|++++|++++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 999998888899999999999999999987666678899999999999999887 4688899999999999999998888
Q ss_pred CChhhhccCCC----cEEEccCCccccCCCccccccCCCcEEEccCccccc-cCcccccCCCCCceeecCCCcCCCCcCc
Q 036229 266 IPQELANLTGL----EVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVG-AVPATIFNMSTLTGLGLQSNSLSGSLSS 340 (982)
Q Consensus 266 ~p~~l~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 340 (982)
.|..++.+++| +.|++++|.+++..|..|... +|+.|++++|.... ..+..+..++.++.+.+..+.+...
T Consensus 165 ~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~--- 240 (570)
T 2z63_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE--- 240 (570)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCC---
T ss_pred cHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCc---
Confidence 78888888888 889999999988888777766 78999998885432 3455566666666555543332210
Q ss_pred cccccCCCccEEEccCCcccccccccccCCCCCCEEEeccc-cCccccCCccccCCccceecccccccccCccccccccc
Q 036229 341 IADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRN-SFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSS 419 (982)
Q Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 419 (982)
.+++ .+....+.+ +..+ +++.+++++| .+.+..|..|..+++|+.|++++|.++.++. .
T Consensus 241 ------~~l~--~~~~~~~~~-----l~~l-~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~l~~------~ 300 (570)
T 2z63_A 241 ------GNLE--KFDKSALEG-----LCNL-TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD------F 300 (570)
T ss_dssp ------SSCE--ECCTTTTGG-----GGGS-EEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECSCCB------C
T ss_pred ------hhhh--hcchhhhcc-----cccc-chhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchhhhh------h
Confidence 0011 111111111 1111 2445555555 5555556666666666666666665554332 2
Q ss_pred CCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCC
Q 036229 420 FSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQK 499 (982)
Q Consensus 420 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 499 (982)
+..+ +|++|++++|.+..+ |. ..+++|+.|++++|.+.+..+. ..+++
T Consensus 301 ~~~~-~L~~L~l~~n~~~~l---------------------------~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~ 348 (570)
T 2z63_A 301 SYNF-GWQHLELVNCKFGQF---------------------------PT--LKLKSLKRLTFTSNKGGNAFSE--VDLPS 348 (570)
T ss_dssp CSCC-CCSEEEEESCBCSSC---------------------------CB--CBCSSCCEEEEESCBSCCBCCC--CBCTT
T ss_pred hccC-CccEEeeccCccccc---------------------------Cc--ccccccCEEeCcCCcccccccc--ccCCC
Confidence 3334 555666666544322 22 2456677777777777655554 56777
Q ss_pred CCeEEeeccCCCCCC--CcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCccccccc--ccccccCceEEe
Q 036229 500 LQGLHLEDNKLEGPI--PDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPL--TIWNLKGMLYLN 575 (982)
Q Consensus 500 L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~--~~~~l~~L~~L~ 575 (982)
|++|++++|++++.. |..+..+++|++|++++|++++..+. +.++++|++|++++|+++.++. .+..+++|++|+
T Consensus 349 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 427 (570)
T 2z63_A 349 LEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 427 (570)
T ss_dssp CCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEE
T ss_pred CCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEe
Confidence 777788777777543 56677778888888888888755444 7788888888888888876543 456788888888
Q ss_pred cCCCcccCCCccccccccccceeeccccccc-ccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCC
Q 036229 576 FSSNFFTGPLPLDIGNLKVLIGIDFSTNNFS-DVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLS 654 (982)
Q Consensus 576 Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 654 (982)
+++|.+++..|..+.++++|+.|++++|.++ +.+|..++.+++|++|+|++|++++..|.+|.++++|++|+|++|+++
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 8888888888888999999999999999998 578999999999999999999999988999999999999999999999
Q ss_pred CCCCcccccccccceeecCCCcccccCCCCCCCCCC---CCcccccCcccCCCC
Q 036229 655 RSIPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNF---SAKSFEGNELLCGSP 705 (982)
Q Consensus 655 ~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~---~~~~~~gn~~lc~~~ 705 (982)
+..|..+..+++|++|++++|+++|.+|....+..+ ....+.+.+ .|..|
T Consensus 508 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 508 SVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred CCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 988888999999999999999999999975422111 123344554 77665
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.7e-52 Score=498.40 Aligned_cols=513 Identities=20% Similarity=0.196 Sum_probs=386.9
Q ss_pred EEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcc
Q 036229 86 LNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNAL 165 (982)
Q Consensus 86 L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 165 (982)
++.++.+++ .+|..+. ++++.|||++|++++..|.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 444555666 5666553 5788999999999877777888999999999999999877777888999999999999998
Q ss_pred cccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccc-ccccccccccchhhhhccCCCCCCchhh
Q 036229 166 SGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLG-AIPKEIGNLTKLKELYLGYSGLQGEIPR 244 (982)
Q Consensus 166 ~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 244 (982)
+ .+|+..|.++++|++|++++|++++..+..|+++++|++|++++|++++ .+|..|+++++|++|++++|++++..|.
T Consensus 89 ~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 89 Q-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp C-EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred C-ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 8 4555556889999999999999987766678899999999999999886 4688899999999999999999888888
Q ss_pred hcCCCccc----ceEeccccccCCcCChhhhccCCCcEEEccCCcccc-CCCccccccCCCcEEEccCccccccCccccc
Q 036229 245 EFGNLAEL----ELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTG-EIPPEIHNLHNLKLLDLSHNKLVGAVPATIF 319 (982)
Q Consensus 245 ~~~~l~~L----~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 319 (982)
.++.+++| +.+++++|.+.+..|..+..+ +|++|++++|.... ..+..+.++++++.+++..+.+...
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~------ 240 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE------ 240 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCC------
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCc------
Confidence 88888888 889999999988888777766 79999999886542 3455677778888777665443311
Q ss_pred CCCCCceeecCCCcCCCCcCccccccCCCccEEEccCC-cccccccccccCCCCCCEEEeccccCccccCCccccCCccc
Q 036229 320 NMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSN-NFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLR 398 (982)
Q Consensus 320 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 398 (982)
..++. +....+.+. .--.++.+++++| .+.+..|..+..+++|++|++++|.+++ +|..+..+ +|+
T Consensus 241 --~~l~~--~~~~~~~~l-------~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~ 307 (570)
T 2z63_A 241 --GNLEK--FDKSALEGL-------CNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQ 307 (570)
T ss_dssp --SSCEE--CCTTTTGGG-------GGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCS
T ss_pred --hhhhh--cchhhhccc-------cccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-Ccc
Confidence 11111 111111100 0113577888888 7788888888889999999999999884 67778888 999
Q ss_pred eecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccce
Q 036229 399 LMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIG 478 (982)
Q Consensus 399 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~ 478 (982)
.|++++|.++.++. ..+++|++|++++|.+.+..+ . ..+++|+.
T Consensus 308 ~L~l~~n~~~~l~~--------~~l~~L~~L~l~~n~~~~~~~--------------------------~--~~~~~L~~ 351 (570)
T 2z63_A 308 HLELVNCKFGQFPT--------LKLKSLKRLTFTSNKGGNAFS--------------------------E--VDLPSLEF 351 (570)
T ss_dssp EEEEESCBCSSCCB--------CBCSSCCEEEEESCBSCCBCC--------------------------C--CBCTTCCE
T ss_pred EEeeccCcccccCc--------ccccccCEEeCcCCccccccc--------------------------c--ccCCCCCE
Confidence 99999999885542 356788888888886654322 1 34556666
Q ss_pred EEecCCCCCCCC--CccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCC-ccccCCCcccccccCC
Q 036229 479 IYLGGNKLNGSI--PITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIP-ACFSNLASLGTLSLGS 555 (982)
Q Consensus 479 L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~ 555 (982)
|++++|++++.. |..+.++++|++|++++|++++..+ .+..+++|+.|++++|++++..| ..|.++++|++|++++
T Consensus 352 L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 430 (570)
T 2z63_A 352 LDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 430 (570)
T ss_dssp EECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTT
T ss_pred EeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcC
Confidence 666666665443 5556666666666666666664333 36666677777777776665544 4566667777777777
Q ss_pred Ccccc-cccccccccCceEEecCCCccc-CCCccccccccccceeecccccccccccccccCccCcceEecccccccCCc
Q 036229 556 NKLTS-IPLTIWNLKGMLYLNFSSNFFT-GPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSI 633 (982)
Q Consensus 556 N~l~~-ip~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 633 (982)
|+++. +|..+..+++|++|++++|.++ +.+|..+..+++|+.||+++|++++..|..|+.+++|++|+|++|++++.+
T Consensus 431 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 510 (570)
T 2z63_A 431 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510 (570)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCC
Confidence 77664 3445556677777777777776 567778888889999999999999888999999999999999999999988
Q ss_pred cccccCCCCCCeeeCCCCcCCCCCCc
Q 036229 634 SESFGDLISLKSLNLSNNNLSRSIPI 659 (982)
Q Consensus 634 ~~~~~~l~~L~~L~Ls~N~l~~~~p~ 659 (982)
|..|.++++|+.|++++|++++..|.
T Consensus 511 ~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 511 DGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred HHHhhcccCCcEEEecCCcccCCCcc
Confidence 88999999999999999999988774
No 16
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-52 Score=505.96 Aligned_cols=508 Identities=21% Similarity=0.240 Sum_probs=316.0
Q ss_pred CChhHHHHHHHHHHHhcCCCCccccCCCCCCCC----CCceee-EEecCCC---CcEEEEEeCCCCccccCCccccCCCC
Q 036229 35 SITTDQDALLALKAHITHDPTNFLAKNWNTSTP----VCNWTG-VTCDVHS---HRVKVLNISHLNLTGTIPSQLWNLSS 106 (982)
Q Consensus 35 ~~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~~----~c~w~g-v~c~~~~---~~v~~L~l~~~~l~g~~~~~l~~l~~ 106 (982)
-.+++.+.-.++++-...- .-..|+...+ .|+|.. ..|. .. ..|+. .. -.+
T Consensus 24 ~~~~~~~d~~aL~~~~~~~----~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C---~~-------------~~~ 82 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDAL----NGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSL---NS-------------NGR 82 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHT----TGGGCCCCC------CCCCCSSCGG-GTTCCTTEEE---CT-------------TCC
T ss_pred hhhhHHHHHHHHHHHHHHc----CCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEE---cC-------------CCC
Confidence 3455667777888777553 2357874432 247853 2232 34 34542 11 046
Q ss_pred CCEEEcCCCCccccCcchhhhccCCcEEEccCCcc------cC------ccCccccCcCCCCccccccCcccccCchhhh
Q 036229 107 LQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQL------SG------AFPSFIFNKSSLQHLDFSYNALSGEIPANIC 174 (982)
Q Consensus 107 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~ 174 (982)
++.|+|++|.++|.+|++++++++|++|+|++|.+ .| .+|... +..|+ +++++|.+.+.+|..+.
T Consensus 83 V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~ 159 (636)
T 4eco_A 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFS 159 (636)
T ss_dssp EEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSC
T ss_pred EEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHH
Confidence 78999999999999999999999999999999987 22 333333 44555 66666666665555442
Q ss_pred cCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhcc--CCCCCCchhhhcCCCccc
Q 036229 175 SNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLG--YSGLQGEIPREFGNLAEL 252 (982)
Q Consensus 175 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~~~~~~~l~~L 252 (982)
..+..+..+++....+.. .....++.+.++ .|++++ +|..|+++++|
T Consensus 160 ~~~~~l~~~~l~~~~~~~------------------------------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L 208 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKK------------------------------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKL 208 (636)
T ss_dssp HHHHHHHHHCTTSCCCCC------------------------------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTC
T ss_pred HHHHHHhhcCcccccccc------------------------------ccccchhhhhhccccCCCcc-CCHHHhcccCC
Confidence 222233333333222210 111122223222 355555 55555555555
Q ss_pred ceEeccccccCCc-----------------CChhhh--ccCCCcEEEccCCccccCCCccccccCCCcEEEccCcc-ccc
Q 036229 253 ELMALQVSNLQGE-----------------IPQELA--NLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNK-LVG 312 (982)
Q Consensus 253 ~~L~L~~n~l~~~-----------------~p~~l~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~ 312 (982)
+.|+|++|++++. +|+.++ ++++|++|+|++|++++.+|..|.++++|++|+|++|+ +++
T Consensus 209 ~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~ 288 (636)
T 4eco_A 209 RQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG 288 (636)
T ss_dssp CEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCH
T ss_pred CEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcc
Confidence 5555555555553 777777 88888888888888888888888888888888888888 887
Q ss_pred -cCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccc--cccCCCCCCEEEeccccCccccCC
Q 036229 313 -AVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPR--FIFNASKLSVLELGRNSFSGFIPN 389 (982)
Q Consensus 313 -~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~i~~~~~~ 389 (982)
.+|..++.+..+ ..+++|++|++++|+++ .+|. .+.++++|++|++++|++++.+|
T Consensus 289 ~~lp~~~~~L~~~-------------------~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 289 EQLKDDWQALADA-------------------PVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp HHHHHHHHHHHHS-------------------GGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-
T ss_pred ccchHHHHhhhcc-------------------ccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-
Confidence 778777654110 12244577777777777 6666 77888888888888888887667
Q ss_pred ccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcc
Q 036229 390 TFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKE 469 (982)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~ 469 (982)
.|..+++|+.|++++|.++.+ |..
T Consensus 348 ~~~~l~~L~~L~L~~N~l~~l--------------------------------------------------------p~~ 371 (636)
T 4eco_A 348 AFGSEIKLASLNLAYNQITEI--------------------------------------------------------PAN 371 (636)
T ss_dssp CCEEEEEESEEECCSSEEEEC--------------------------------------------------------CTT
T ss_pred hhCCCCCCCEEECCCCccccc--------------------------------------------------------cHh
Confidence 666666666555555554422 223
Q ss_pred cccccc-cceEEecCCCCCCCCCccccCcC--CCCeEEeeccCCCCCCCcccC-------CCccccEEEccCCcCCcCCC
Q 036229 470 IGNLTN-LIGIYLGGNKLNGSIPITLGKLQ--KLQGLHLEDNKLEGPIPDDIC-------RLTKLYELGLSGNKLSGSIP 539 (982)
Q Consensus 470 ~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p 539 (982)
+..+++ |+.|++++|+++ .+|..+..++ +|++|++++|++++.+|..|. .+++|++|+|++|+|+++.+
T Consensus 372 l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~ 450 (636)
T 4eco_A 372 FCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPK 450 (636)
T ss_dssp SEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCT
T ss_pred hhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCH
Confidence 333333 444444444444 3333333322 444455555555444444444 44455555555555553333
Q ss_pred ccccCCCcccccccCCCccccccccccccc--------CceEEecCCCcccCCCccccc--cccccceeecccccccccc
Q 036229 540 ACFSNLASLGTLSLGSNKLTSIPLTIWNLK--------GMLYLNFSSNFFTGPLPLDIG--NLKVLIGIDFSTNNFSDVI 609 (982)
Q Consensus 540 ~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~--------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~Ldls~N~l~~~~ 609 (982)
..+..+++|++|+|++|+++.+|...+... +|++|++++|+++ .+|..+. .+++|+.|||++|++++ +
T Consensus 451 ~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-i 528 (636)
T 4eco_A 451 ELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-F 528 (636)
T ss_dssp HHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-C
T ss_pred HHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-c
Confidence 334445555555555555555554443321 5556666666655 4455554 56666666666666665 5
Q ss_pred cccccCccCcceEec------ccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCccccc
Q 036229 610 PTVIGGLTNLQYLFL------GYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGE 680 (982)
Q Consensus 610 p~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 680 (982)
|..++.+++|++|+| ++|++.+.+|.+|+++++|++|+|++|++ +.+|..+. ++|++||+++|++...
T Consensus 529 p~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 529 PTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEE
T ss_pred ChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccc
Confidence 666666666666666 67889999999999999999999999999 68898876 7999999999998743
No 17
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.3e-49 Score=482.75 Aligned_cols=559 Identities=19% Similarity=0.160 Sum_probs=365.4
Q ss_pred ccCCCCCCCCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEcc
Q 036229 58 LAKNWNTSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFR 137 (982)
Q Consensus 58 ~~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls 137 (982)
.+++|+.+.+ ..|....|.... +..+.++.+++ .+|+.+. +++++|||++|+|++..|.+|.++++|++|+|+
T Consensus 12 ~~~~~~~~~p-~~~~~c~~~~~~---~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls 84 (635)
T 4g8a_A 12 KLAAANSSIP-ESWEPCVEVVPN---ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 84 (635)
T ss_dssp --------------CCSEEEETT---TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred hhhcccCCCC-CCCCCccccCCC---CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECC
Confidence 4566655432 445554444222 12456677787 7777653 478999999999986666789999999999999
Q ss_pred CCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccc
Q 036229 138 GNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGA 217 (982)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 217 (982)
+|+|++..|..|.++++|++|+|++|+|+ .+|+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++++.
T Consensus 85 ~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~ 163 (635)
T 4g8a_A 85 RCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF 163 (635)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC
T ss_pred CCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC
Confidence 99999777778999999999999999998 67877778999999999999999887777889999999999999988753
Q ss_pred -cccccccccchhhhhccCCCCCCchhhhcCCCcccc----eEeccccccCCcCChhhhccCCCcEEEccCCcccc-CCC
Q 036229 218 -IPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELE----LMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTG-EIP 291 (982)
Q Consensus 218 -~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~p 291 (982)
.|..++.+++|++|+|++|++++..+..|..+.+++ .++++.|.+....+..+ ....++.+++++|..+. ..+
T Consensus 164 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~ 242 (635)
T 4g8a_A 164 KLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMK 242 (635)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHH
T ss_pred CCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccc
Confidence 567778888888888888888877676665554433 34444444443322222 22234444444443332 112
Q ss_pred ccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccc---ccccccc
Q 036229 292 PEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSG---TIPRFIF 368 (982)
Q Consensus 292 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~ 368 (982)
..+..+..++...+..+....... +. ............+...++..+.... ..+..+.
T Consensus 243 ~~~~~l~~l~~~~l~~~~~~~~~~------------------l~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~ 303 (635)
T 4g8a_A 243 TCIQGLAGLEVHRLVLGEFRNEGN------------------LE-KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFN 303 (635)
T ss_dssp HHHHTTTTCEEEEEEEECCTTSCC------------------CS-CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTG
T ss_pred hhhcCCcccccccccccccccccc------------------cc-cccccccccccchhhhhhhhhhhcccccchhhhhh
Confidence 233334444433333222111000 00 0000011112222333332222111 1222233
Q ss_pred CCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccc
Q 036229 369 NASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNL 448 (982)
Q Consensus 369 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 448 (982)
...+++.+++.+|.+.... .+.....|+.|++.+|.+..+.. ..++.
T Consensus 304 ~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~--------~~l~~----------------------- 350 (635)
T 4g8a_A 304 CLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT--------LKLKS----------------------- 350 (635)
T ss_dssp GGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC--------CBCTT-----------------------
T ss_pred hhccccccccccccccccc--ccccchhhhhhhcccccccCcCc--------ccchh-----------------------
Confidence 3444555555555444321 22333344444444443332221 12233
Q ss_pred cccccEEeccCCccccCCCcccccccccceEEecCCCCCC--CCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccE
Q 036229 449 SHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNG--SIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYE 526 (982)
Q Consensus 449 ~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 526 (982)
++.++++.|.+... .....+++|+.+++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.
T Consensus 351 ---L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 351 ---LKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEH 424 (635)
T ss_dssp ---CCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCE
T ss_pred ---hhhcccccccCCCC--cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccc
Confidence 34444444443322 223456777777777777743 345566677788888888887763 4556777888888
Q ss_pred EEccCCcCCcCCC-ccccCCCcccccccCCCccccccc-ccccccCceEEecCCCcc-cCCCccccccccccceeecccc
Q 036229 527 LGLSGNKLSGSIP-ACFSNLASLGTLSLGSNKLTSIPL-TIWNLKGMLYLNFSSNFF-TGPLPLDIGNLKVLIGIDFSTN 603 (982)
Q Consensus 527 L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ip~-~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~Ldls~N 603 (982)
++++.|......+ ..|.++++++.++++.|+++.++. .+..++.+++|++++|.+ .+..|..+..+++|+.|||++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 8888777655443 457788888888888888885544 445677888888888874 4457788999999999999999
Q ss_pred cccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccc-cccceeecCCCcccccCC
Q 036229 604 NFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKL-SYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 604 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~l~ls~N~l~~~~p 682 (982)
+|++++|..|+++++|++|+|++|+|++.+|..|.++++|++|||++|+|++..|..+..+ ++|++|+|++|+|.|.+.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999999999999999999999999999999999999999999999999999999999988 689999999999999876
Q ss_pred C
Q 036229 683 K 683 (982)
Q Consensus 683 ~ 683 (982)
-
T Consensus 585 ~ 585 (635)
T 4g8a_A 585 H 585 (635)
T ss_dssp G
T ss_pred c
Confidence 3
No 18
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-50 Score=477.28 Aligned_cols=458 Identities=20% Similarity=0.210 Sum_probs=315.2
Q ss_pred cEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeec
Q 036229 132 KYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSI 211 (982)
Q Consensus 132 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 211 (982)
++|++++|+++ .+|..+. ++|++|||++|.+++ +++..|.++++|++|+|++|++++..|.+|+++++|++|||++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISE-LWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCC-CCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccc-cChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 46777777777 4666555 677777777777763 4433346777777777777777766667777777777777777
Q ss_pred cccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCC
Q 036229 212 NNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIP 291 (982)
Q Consensus 212 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p 291 (982)
|+++ .+|.. .+++|++|+|++|++++. .+|..|+++++|++|++++|++++
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~-----------------------~~p~~~~~l~~L~~L~L~~n~l~~--- 129 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDAL-----------------------PICKEFGNMSQLKFLGLSTTHLEK--- 129 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSC-----------------------CCCGGGGGCTTCCEEEEEESSCCG---
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccc-----------------------cchhhhccCCcceEEEecCcccch---
Confidence 7776 44444 555666666666665542 234444444555555555555443
Q ss_pred ccccccCCC--cEEEccCccc--cccCcccccCCC-CCceeecCCCcCCCCcCccccccCCCccEEEccCCc-------c
Q 036229 292 PEIHNLHNL--KLLDLSHNKL--VGAVPATIFNMS-TLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNN-------F 359 (982)
Q Consensus 292 ~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~-------l 359 (982)
..+..+++| ++|++++|++ .+..|..+..+. +...+++++|.+.+.+....+..+++|+.|++++|. +
T Consensus 130 ~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 209 (520)
T 2z7x_B 130 SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYF 209 (520)
T ss_dssp GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHH
T ss_pred hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccccee
Confidence 234444444 5555555555 444444444433 122344445554444444444455556666666665 4
Q ss_pred cccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCC
Q 036229 360 SGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGI 439 (982)
Q Consensus 360 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 439 (982)
.+.+| .+..+++|+.|++++|.+++..+..+.. ...++
T Consensus 210 ~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~--------------------------~~~~~--------------- 247 (520)
T 2z7x_B 210 LSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQ--------------------------LVWHT--------------- 247 (520)
T ss_dssp HHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHH--------------------------HHHTS---------------
T ss_pred ecchh-hhccccchhhccccccccCHHHHHHHHH--------------------------HhhhC---------------
Confidence 44444 4555666666666665554321110000 00012
Q ss_pred CCccccccccccccEEeccCCccccCCCccc-----ccccccceEEecCCCCCCCCC-ccccCc---CCCCeEEeeccCC
Q 036229 440 LPRMSMGNLSHSLEYFDMSYCNVSGGFPKEI-----GNLTNLIGIYLGGNKLNGSIP-ITLGKL---QKLQGLHLEDNKL 510 (982)
Q Consensus 440 ~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l 510 (982)
+|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+
T Consensus 248 -----------~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l 314 (520)
T 2z7x_B 248 -----------TVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRM 314 (520)
T ss_dssp -----------SCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCC
T ss_pred -----------cccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcc
Confidence 34444445556666666666 7888999999999998 344 566555 6799999999998
Q ss_pred CCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCccccc---ccccccccCceEEecCCCcccCCCcc
Q 036229 511 EGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSI---PLTIWNLKGMLYLNFSSNFFTGPLPL 587 (982)
Q Consensus 511 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~i---p~~~~~l~~L~~L~Ls~N~l~~~~~~ 587 (982)
.+.. .+..+++|++|++++|++++..|..+.++++|++|+|++|+++.+ |..+..+++|++|++++|++++.+|.
T Consensus 315 ~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~ 392 (520)
T 2z7x_B 315 VHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK 392 (520)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG
T ss_pred cccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc
Confidence 7432 126788999999999999988899999999999999999999954 45677899999999999999986665
Q ss_pred -ccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcc-ccccc
Q 036229 588 -DIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPIS-LEKLS 665 (982)
Q Consensus 588 -~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~ 665 (982)
.+..+++|+.|++++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++ +|.. +..++
T Consensus 393 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~ 468 (520)
T 2z7x_B 393 GDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIFDRLT 468 (520)
T ss_dssp CSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTTTTCT
T ss_pred chhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHhccCC
Confidence 488899999999999999988887765 79999999999999 788888899999999999999995 6655 89999
Q ss_pred ccceeecCCCcccccCCC
Q 036229 666 YLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 666 ~L~~l~ls~N~l~~~~p~ 683 (982)
+|++|++++|+++|.++.
T Consensus 469 ~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 469 SLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp TCCEEECCSSCBCCCHHH
T ss_pred cccEEECcCCCCcccCCc
Confidence 999999999999998874
No 19
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.8e-49 Score=471.97 Aligned_cols=486 Identities=21% Similarity=0.218 Sum_probs=323.2
Q ss_pred ccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCC
Q 036229 159 DFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGL 238 (982)
Q Consensus 159 ~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 238 (982)
|.++|.++ .+|..++ ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 11 ~~~~~~l~-~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 11 DGRSRSFT-SIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp ECTTSCCS-SCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCccc-cccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 44444444 4554442 4555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCchhhhcCCCcccceEeccccccCC-cCChhhhccCCCcEEEccCCc-cccCCCccccccCCCcEEEccCccccccCcc
Q 036229 239 QGEIPREFGNLAELELMALQVSNLQG-EIPQELANLTGLEVLKLGKNF-LTGEIPPEIHNLHNLKLLDLSHNKLVGAVPA 316 (982)
Q Consensus 239 ~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 316 (982)
++..|..|+++++|+.|++++|++++ ..|..++++++|++|++++|+ ++...+..|.++++|++|++++|++++..|.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 166 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ 166 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChh
Confidence 55555555555556666666555554 234556666666666666665 3333334566666666666666666666666
Q ss_pred cccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccc--c-ccccCCCCCCEEEeccccCccccCCcccc
Q 036229 317 TIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTI--P-RFIFNASKLSVLELGRNSFSGFIPNTFGN 393 (982)
Q Consensus 317 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~ 393 (982)
.+..+++|+.|++++|.+.. ++......+++|++|++++|++++.. | .....+++|+.|++++|.+++..+..+.
T Consensus 167 ~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~- 244 (549)
T 2z81_A 167 SLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELL- 244 (549)
T ss_dssp TTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHH-
T ss_pred hhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHH-
Confidence 66655555555555554431 11222223455566666666665431 1 1223345666666666665543322211
Q ss_pred CCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccc
Q 036229 394 LRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNL 473 (982)
Q Consensus 394 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l 473 (982)
..+..+++|+.+++++|.+.++... .......+..+
T Consensus 245 ------------------------~~~~~~~~L~~l~l~~~~~~~~~~~--------------------~~~~~~~~~~l 280 (549)
T 2z81_A 245 ------------------------KLLRYILELSEVEFDDCTLNGLGDF--------------------NPSESDVVSEL 280 (549)
T ss_dssp ------------------------GGGGGCTTCCEEEEESCEEECCSCC--------------------CCCTTTCCCCC
T ss_pred ------------------------HHhhhhccccccccccccccccccc--------------------cccchhhhhhh
Confidence 1234456667777777765543111 00112335567
Q ss_pred cccceEEecCCCCCCC-----CCccccCcCCCCeEEeeccCCCCCCCccc-CCCccccEEEccCCcCCcCCC---ccccC
Q 036229 474 TNLIGIYLGGNKLNGS-----IPITLGKLQKLQGLHLEDNKLEGPIPDDI-CRLTKLYELGLSGNKLSGSIP---ACFSN 544 (982)
Q Consensus 474 ~~L~~L~L~~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~ 544 (982)
++|+.|++.++.+... .+..+...++|+.|++++|+++ .+|..+ ..+++|++|+|++|++++.+| ..+..
T Consensus 281 ~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 359 (549)
T 2z81_A 281 GKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGA 359 (549)
T ss_dssp TTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTS
T ss_pred cccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhc
Confidence 7888888888877532 2233445678999999999998 667665 579999999999999998764 45789
Q ss_pred CCcccccccCCCccccccc---ccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcce
Q 036229 545 LASLGTLSLGSNKLTSIPL---TIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQY 621 (982)
Q Consensus 545 l~~L~~L~L~~N~l~~ip~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~ 621 (982)
+++|++|+|++|+++.+|. .+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++. |..+ .++|++
T Consensus 360 l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~ 435 (549)
T 2z81_A 360 WPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEV 435 (549)
T ss_dssp STTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSE
T ss_pred cccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceE
Confidence 9999999999999998874 4778999999999999999 5788899999999999999999754 4433 268999
Q ss_pred EecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCC-CCCCCCCCcccccCcc
Q 036229 622 LFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKG-GSFGNFSAKSFEGNEL 700 (982)
Q Consensus 622 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~gn~~ 700 (982)
|+|++|+|++.+ .++++|++|+|++|+|+ .+|. ...+++|++|||++|++++.+|.. ..+.........+|++
T Consensus 436 L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 436 LDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp EECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCB
T ss_pred EECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCc
Confidence 999999999753 57899999999999998 6776 568999999999999999877753 3455666777899999
Q ss_pred cCCCC
Q 036229 701 LCGSP 705 (982)
Q Consensus 701 lc~~~ 705 (982)
.|..|
T Consensus 510 ~~~~~ 514 (549)
T 2z81_A 510 DCSCP 514 (549)
T ss_dssp CCCHH
T ss_pred cCCCc
Confidence 88754
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.9e-49 Score=469.56 Aligned_cols=462 Identities=20% Similarity=0.215 Sum_probs=264.5
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccC
Q 036229 84 KVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYN 163 (982)
Q Consensus 84 ~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 163 (982)
+.||+++++++ .+|..+. ++|++|||++|++++..|.++..+++|++|+|++|++++..|..|+++++|++|||++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 36788888888 6777666 78888888888888777778888888888888888888777888888888888888888
Q ss_pred cccccCchhhhcCCCCCCeeeecceeeec-ccCCCccCcCcccEEEeeccccccccccccccccch--hhhhccCCCC--
Q 036229 164 ALSGEIPANICSNLPFLESISLSQNMFHG-RIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKL--KELYLGYSGL-- 238 (982)
Q Consensus 164 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 238 (982)
.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++ ..+..+++| ++|++++|++
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 887 67765 67888888888888876 467788888888888888888775 345566666 7777777777
Q ss_pred CCchhhhcCCCc-ccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCcc-------c
Q 036229 239 QGEIPREFGNLA-ELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNK-------L 310 (982)
Q Consensus 239 ~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------l 310 (982)
++..|..+..+. +...+++++|++.+.+++ ..+.++++|+.|++++|. +
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~-----------------------~~~~~l~~L~~L~l~~n~~~~~~~~~ 209 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILD-----------------------VSVKTVANLELSNIKCVLEDNKCSYF 209 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCC-----------------------CCCTTCSEEEECCEEECCSTTTTHHH
T ss_pred cccccccccccccceEEEEeccCcchhhhhh-----------------------hhhhcccceeecccccccccccccee
Confidence 555666555544 222334444444433322 234445555555555554 4
Q ss_pred cccCcccccCCCCCceeecCCCcCCCCcCcc--ccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccC
Q 036229 311 VGAVPATIFNMSTLTGLGLQSNSLSGSLSSI--ADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIP 388 (982)
Q Consensus 311 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~ 388 (982)
.+.+| .+..+++|+.|++++|.+.+..... .....++|++|++++|++++.+|..++..
T Consensus 210 ~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~------------------ 270 (520)
T 2z7x_B 210 LSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY------------------ 270 (520)
T ss_dssp HHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC------------------
T ss_pred ecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc------------------
Confidence 43333 3444444444443333332100000 00012234555555555544444444000
Q ss_pred CccccCCccceecccccccccCcccccccccCCCC---ccccEEEccCCCCCCCCCccccccccccccEEeccCCccccC
Q 036229 389 NTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNC---KSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGG 465 (982)
Q Consensus 389 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~ 465 (982)
....+++|+.+++++|.+ .++.. .+..+ .+|+.|++++|++..+.. ......|++|++++|++++.
T Consensus 271 -~~~~l~~L~~l~l~~n~~-~~p~~-----~~~~~~~~~~L~~L~l~~n~l~~~~~----~~~l~~L~~L~Ls~n~l~~~ 339 (520)
T 2z7x_B 271 -SGTSLKALSIHQVVSDVF-GFPQS-----YIYEIFSNMNIKNFTVSGTRMVHMLC----PSKISPFLHLDFSNNLLTDT 339 (520)
T ss_dssp -CSCCCCEEEEEEEEECCC-CSCTH-----HHHHHHHTCCCSEEEEESSCCCCCCC----CSSCCCCCEEECCSSCCCTT
T ss_pred -ccccCceeEeccccccce-ecchh-----hhhcccccCceeEEEcCCCccccccc----hhhCCcccEEEeECCccChh
Confidence 004444444444444444 22210 01111 345566666665543210 01122344444444445544
Q ss_pred CCcccccccccceEEecCCCCCC--CCCccccCcCCCCeEEeeccCCCCCCCc-ccCCCccccEEEccCCcCCcCCCccc
Q 036229 466 FPKEIGNLTNLIGIYLGGNKLNG--SIPITLGKLQKLQGLHLEDNKLEGPIPD-DICRLTKLYELGLSGNKLSGSIPACF 542 (982)
Q Consensus 466 ~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~ 542 (982)
.|..++.+++|+.|++++|++++ .+|..++.+++|++|+|++|++++.+|. .+..+++|++|++++|++++..|..+
T Consensus 340 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 419 (520)
T 2z7x_B 340 VFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCL 419 (520)
T ss_dssp TTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSC
T ss_pred hhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhh
Confidence 55555555566666666666554 3334555555555555555555553333 34555555555555555554444433
Q ss_pred cCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceE
Q 036229 543 SNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYL 622 (982)
Q Consensus 543 ~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L 622 (982)
. ++|++|+|++|+++++|.. +..+++|+.||+++|+++++.+..|..+++|++|
T Consensus 420 ~--~~L~~L~Ls~N~l~~ip~~------------------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L 473 (520)
T 2z7x_B 420 P--PRIKVLDLHSNKIKSIPKQ------------------------VVKLEALQELNVASNQLKSVPDGIFDRLTSLQKI 473 (520)
T ss_dssp C--TTCCEEECCSSCCCCCCGG------------------------GGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred c--ccCCEEECCCCcccccchh------------------------hhcCCCCCEEECCCCcCCccCHHHhccCCcccEE
Confidence 2 4455555555555544444 4455555566666666654333347777778888
Q ss_pred ecccccccCCcc
Q 036229 623 FLGYNRLQGSIS 634 (982)
Q Consensus 623 ~Ls~N~l~~~~~ 634 (982)
+|++|++++..+
T Consensus 474 ~l~~N~~~c~c~ 485 (520)
T 2z7x_B 474 WLHTNPWDCSCP 485 (520)
T ss_dssp ECCSSCBCCCHH
T ss_pred ECcCCCCcccCC
Confidence 888888776544
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.2e-48 Score=476.15 Aligned_cols=460 Identities=20% Similarity=0.183 Sum_probs=326.8
Q ss_pred CCCCEEEcCCCCccccCcchhhhccCCcEEEc-cCCcccCccCccccCc----CCCC--ccc---------c-ccCcccc
Q 036229 105 SSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNF-RGNQLSGAFPSFIFNK----SSLQ--HLD---------F-SYNALSG 167 (982)
Q Consensus 105 ~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l----~~L~--~L~---------L-s~N~l~~ 167 (982)
.+++.|+|++|.+.|.+|+++++|++|++|+| ++|.++|..|-..... +..+ .+. . ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 56889999999999999999999999999999 9999998755332111 0000 000 0 0001110
Q ss_pred cCchhh----------hcCCCCCCeeeecc--eeeecccCCCccCcCcccEEEeecccccc-ccccccccccchhhhhcc
Q 036229 168 EIPANI----------CSNLPFLESISLSQ--NMFHGRIPSALSNCKYLEILSLSINNLLG-AIPKEIGNLTKLKELYLG 234 (982)
Q Consensus 168 ~ip~~~----------~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~ 234 (982)
.++..+ ......++.+.+.. |++++ +|..|+++++|++|+|++|++++ .+|..+. ..+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~s 473 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWE--------DAN 473 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCS--------CTT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccc--------ccc
Confidence 110000 02334555565655 99998 89999999999999999999997 2332221 123
Q ss_pred CCCCCCchhhhcC--CCcccceEeccccccCCcCChhhhccCCCcEEEccCCc-ccc-CCCccccccC-------CCcEE
Q 036229 235 YSGLQGEIPREFG--NLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNF-LTG-EIPPEIHNLH-------NLKLL 303 (982)
Q Consensus 235 ~N~l~~~~~~~~~--~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L 303 (982)
.|.++|.+|..++ ++++|+.|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..+.+++ +|++|
T Consensus 474 ~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L 553 (876)
T 4ecn_A 474 SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIF 553 (876)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEE
T ss_pred cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEE
Confidence 3566677888877 88999999999999888999889999999999999998 887 7787776665 99999
Q ss_pred EccCccccccCcc--cccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccc
Q 036229 304 DLSHNKLVGAVPA--TIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRN 381 (982)
Q Consensus 304 ~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 381 (982)
+|++|+++ .+|. .+.++++| ++|+|++|+++ .+| .+..+++|+.|+|++|
T Consensus 554 ~Ls~N~L~-~ip~~~~l~~L~~L-------------------------~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N 605 (876)
T 4ecn_A 554 YMGYNNLE-EFPASASLQKMVKL-------------------------GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYN 605 (876)
T ss_dssp ECCSSCCC-BCCCHHHHTTCTTC-------------------------CEEECTTSCCC-BCC-CCCTTSEESEEECCSS
T ss_pred EeeCCcCC-ccCChhhhhcCCCC-------------------------CEEECCCCCcc-cch-hhcCCCcceEEECcCC
Confidence 99999999 7777 77777666 66667777776 666 7888999999999999
Q ss_pred cCccccCCccccCCc-cceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCC
Q 036229 382 SFSGFIPNTFGNLRN-LRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYC 460 (982)
Q Consensus 382 ~i~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n 460 (982)
+++ .+|..+..+++ |+ +|+|++|+++.+
T Consensus 606 ~l~-~lp~~l~~l~~~L~-----------------------------~L~Ls~N~L~~l--------------------- 634 (876)
T 4ecn_A 606 QIE-EIPEDFCAFTDQVE-----------------------------GLGFSHNKLKYI--------------------- 634 (876)
T ss_dssp CCS-CCCTTSCEECTTCC-----------------------------EEECCSSCCCSC---------------------
T ss_pred ccc-cchHHHhhccccCC-----------------------------EEECcCCCCCcC---------------------
Confidence 999 66666666655 55 555665544322
Q ss_pred ccccCCCcccccc--cccceEEecCCCCCCCCCccc---c--CcCCCCeEEeeccCCCCCCCcc-cCCCccccEEEccCC
Q 036229 461 NVSGGFPKEIGNL--TNLIGIYLGGNKLNGSIPITL---G--KLQKLQGLHLEDNKLEGPIPDD-ICRLTKLYELGLSGN 532 (982)
Q Consensus 461 ~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N 532 (982)
|..+..+ ++|+.|+|++|++++.+|... . .+++|+.|+|++|+|+. +|.. +..+++|+.|+|++|
T Consensus 635 ------p~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N 707 (876)
T 4ecn_A 635 ------PNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNN 707 (876)
T ss_dssp ------CSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSC
T ss_pred ------chhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCC
Confidence 2333333 237777777777776555322 2 23467788888888873 4443 346777778888887
Q ss_pred cCCcCCCccccC-------CCcccccccCCCcccccccccc--cccCceEEecCCCcccCCCccccccccccceeecccc
Q 036229 533 KLSGSIPACFSN-------LASLGTLSLGSNKLTSIPLTIW--NLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTN 603 (982)
Q Consensus 533 ~l~~~~p~~~~~-------l~~L~~L~L~~N~l~~ip~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N 603 (982)
+|+.+.+..+.. +++|++|+|++|+|+.+|..++ .+++|+.|+|++|++++ +|..+.++++|+.|+|++|
T Consensus 708 ~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N 786 (876)
T 4ecn_A 708 LMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQ 786 (876)
T ss_dssp CCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCC
T ss_pred cCCccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCC
Confidence 777333333322 2267777777777777766665 56666666666666665 4555556666666666665
Q ss_pred cccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccC
Q 036229 604 NFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEI 681 (982)
Q Consensus 604 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 681 (982)
+ ++++|++.+.+|.+|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++...-
T Consensus 787 ~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 787 R------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp B------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred C------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC
Confidence 5 4566999999999999999999999999999 68998876 69999999999997433
No 22
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7e-47 Score=460.85 Aligned_cols=537 Identities=22% Similarity=0.251 Sum_probs=344.2
Q ss_pred EEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecce
Q 036229 109 SLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQN 188 (982)
Q Consensus 109 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N 188 (982)
+.|-++.+++ .+|..+- +++++|||++|+|++..|..|.++++|++|||++|.|+ .+|+..|.++++|++|+|++|
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N 110 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGN 110 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCC
Confidence 3455555555 5665441 35677777777776555556666666666666666666 455555566666666666666
Q ss_pred eeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCC-chhhhcCCCcccceEeccccccCCcCC
Q 036229 189 MFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQG-EIPREFGNLAELELMALQVSNLQGEIP 267 (982)
Q Consensus 189 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p 267 (982)
+|++..+++|.++++|++|+|++|++++..+..|+++++|++|+|++|++++ ..|..++.+++|+.|++++|++++..|
T Consensus 111 ~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 111 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 6665555556666666666666666665444455666666666666665543 234444455555555555555554444
Q ss_pred hhhhccCCCc----EEEccCCccccCCCccccccCCCcEEEccCcccccc-CcccccCCCCCceeecCCCcCCCCcCccc
Q 036229 268 QELANLTGLE----VLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGA-VPATIFNMSTLTGLGLQSNSLSGSLSSIA 342 (982)
Q Consensus 268 ~~l~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~ 342 (982)
..|..+.+++ .++++.|.++.+.+..+.. ..++.+++++|..... .+..+..+..+
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l------------------ 251 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGL------------------ 251 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTC------------------
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCccc------------------
Confidence 4444433322 3444444444333322222 2334444444433211 11222222222
Q ss_pred cccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCC
Q 036229 343 DVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSN 422 (982)
Q Consensus 343 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~ 422 (982)
+...+..+.... ...+.......+..+..+....+..+........ ....+..
T Consensus 252 -------~~~~l~~~~~~~------------------~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--~~~~~~~ 304 (635)
T 4g8a_A 252 -------EVHRLVLGEFRN------------------EGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDG--IIDLFNC 304 (635)
T ss_dssp -------EEEEEEEECCTT------------------SCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEE--CTTTTGG
T ss_pred -------cccccccccccc------------------ccccccccccccccccchhhhhhhhhhhcccccc--hhhhhhh
Confidence 222221111100 0011111222233333333333333222211110 1122444
Q ss_pred CccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCe
Q 036229 423 CKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQG 502 (982)
Q Consensus 423 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 502 (982)
+.+++.+++.+|.+..+.+. .....++.|++++|.+.+..+. .+..|+.+++.+|.+.... .+..+++|+.
T Consensus 305 ~~~l~~l~~~~~~~~~~~~~----~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~ 375 (635)
T 4g8a_A 305 LTNVSSFSLVSVTIERVKDF----SYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEF 375 (635)
T ss_dssp GTTCSEEEEESCEEEECGGG----GSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCE
T ss_pred hccccccccccccccccccc----ccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--cccccccccc
Confidence 55556666666655443221 1123566777777777654443 4567889999999987543 3567899999
Q ss_pred EEeeccCCCC--CCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccc-c-ccccccCceEEecCC
Q 036229 503 LHLEDNKLEG--PIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIP-L-TIWNLKGMLYLNFSS 578 (982)
Q Consensus 503 L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip-~-~~~~l~~L~~L~Ls~ 578 (982)
|++++|.+.. ..+..+..+.+|+.|+++.|.+.. .+..+..+++|+.++++.|+...++ . .+..+.++++++++.
T Consensus 376 L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~ 454 (635)
T 4g8a_A 376 LDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 454 (635)
T ss_dssp EECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTT
T ss_pred chhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccc
Confidence 9999999963 456677788999999999999984 5667889999999999999888543 2 455789999999999
Q ss_pred CcccCCCccccccccccceeeccccccc-ccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCC
Q 036229 579 NFFTGPLPLDIGNLKVLIGIDFSTNNFS-DVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSI 657 (982)
Q Consensus 579 N~l~~~~~~~~~~l~~L~~Ldls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 657 (982)
|.+.+..+..+..++.++.|++++|++. +.+|..|+.+++|++|+|++|+|++.+|.+|.++++|++|+|++|+|++..
T Consensus 455 n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 534 (635)
T 4g8a_A 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 534 (635)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCC
Confidence 9999999999999999999999999854 567889999999999999999999999999999999999999999999988
Q ss_pred CcccccccccceeecCCCcccccCCCCCC-C-CCCCCcccccCcccCCCC
Q 036229 658 PISLEKLSYLEDLDLSFNKLKGEIPKGGS-F-GNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 658 p~~l~~l~~L~~l~ls~N~l~~~~p~~~~-~-~~~~~~~~~gn~~lc~~~ 705 (982)
|..|..+++|++|||++|++++.+|..-. + .........|||+.|+..
T Consensus 535 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 535 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred hhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999999999988886532 2 345556789999999854
No 23
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.8e-47 Score=453.59 Aligned_cols=461 Identities=19% Similarity=0.170 Sum_probs=307.6
Q ss_pred CCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEe
Q 036229 130 TLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSL 209 (982)
Q Consensus 130 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 209 (982)
..+++++++|++++ +|..+. ++|++|||++|.++ .+|+..|.++++|++|+|++|++++..|++|.++++|++|||
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSIS-ELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCC-CCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCcc-ccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 34777777777773 666553 67777777777776 344444467777777777777777666667777777777777
Q ss_pred eccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccC
Q 036229 210 SINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGE 289 (982)
Q Consensus 210 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 289 (982)
++|+++ .+|.. .+++|++|+|++|++++. .+|..|+++++|++|++++|++++.
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l-----------------------~~p~~~~~l~~L~~L~L~~n~l~~~ 161 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVL-----------------------PVCKEFGNLTKLTFLGLSAAKFRQL 161 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBC-----------------------CCCGGGGGCTTCCEEEEECSBCCTT
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCcccc-----------------------CchHhhcccCcccEEecCCCccccC
Confidence 777766 44444 555566666666555532 2234555555555555555555532
Q ss_pred CCccccccCCC--cEEEccCccc--cccCcccccCCC-CCceeecCCCcCCCCcCccccccCCCccEEEccCCcc-----
Q 036229 290 IPPEIHNLHNL--KLLDLSHNKL--VGAVPATIFNMS-TLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNF----- 359 (982)
Q Consensus 290 ~p~~~~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l----- 359 (982)
.+..+++| ++|++++|++ ++..|..+..+. ..-.+++++|.+.+.+.......+++|+.|++++|+.
T Consensus 162 ---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l 238 (562)
T 3a79_B 162 ---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRL 238 (562)
T ss_dssp ---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHH
T ss_pred ---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchH
Confidence 23333344 6666666666 555555554433 1113345555555444444444555566666666641
Q ss_pred cccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCC
Q 036229 360 SGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGI 439 (982)
Q Consensus 360 ~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 439 (982)
.+ ....+..+++|+.|+++++.+.+. .+.... .....+
T Consensus 239 ~~-~~~~l~~l~~L~~L~L~~~~l~~~-------------------~~~~~~-------~~~~~~--------------- 276 (562)
T 3a79_B 239 MT-FLSELTRGPTLLNVTLQHIETTWK-------------------CSVKLF-------QFFWPR--------------- 276 (562)
T ss_dssp HH-HHHHHHSCSSCEEEEEEEEEECHH-------------------HHHHHH-------HHHTTS---------------
T ss_pred HH-HHHHHhccCcceEEEecCCcCcHH-------------------HHHHHH-------Hhhhcc---------------
Confidence 11 112233444444444444433221 000000 000111
Q ss_pred CCccccccccccccEEeccCCccccCCCccc-----ccccccceEEecCCCCCCCCC-ccccCc---CCCCeEEeeccCC
Q 036229 440 LPRMSMGNLSHSLEYFDMSYCNVSGGFPKEI-----GNLTNLIGIYLGGNKLNGSIP-ITLGKL---QKLQGLHLEDNKL 510 (982)
Q Consensus 440 ~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l 510 (982)
+|++|++++|++++.+|..+ ..++.|+.++++.|.+ .+| .++..+ .+|+.|++++|.+
T Consensus 277 -----------~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 277 -----------PVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp -----------SEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred -----------cccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCCc
Confidence 34455555556665566655 6777788888888887 344 333333 6799999999998
Q ss_pred CCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccc---cccccccCceEEecCCCcccCCCcc
Q 036229 511 EGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIP---LTIWNLKGMLYLNFSSNFFTGPLPL 587 (982)
Q Consensus 511 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip---~~~~~l~~L~~L~Ls~N~l~~~~~~ 587 (982)
.... ....+++|++|++++|++++..|..|.++++|++|+|++|+++.+| ..+..+++|++|++++|++++.+|.
T Consensus 344 ~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 421 (562)
T 3a79_B 344 IHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421 (562)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS
T ss_pred cccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh
Confidence 6432 1267889999999999999888999999999999999999999765 4577889999999999999985554
Q ss_pred -ccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcc-ccccc
Q 036229 588 -DIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPIS-LEKLS 665 (982)
Q Consensus 588 -~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~ 665 (982)
.+..+++|+.|++++|++++.+|..+. ++|++|+|++|+|+ .+|..+.++++|++|+|++|+|++ +|.. +..++
T Consensus 422 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~ 497 (562)
T 3a79_B 422 RTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLT 497 (562)
T ss_dssp CCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CCTTSTTTCT
T ss_pred hhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CCHHHHhcCC
Confidence 588999999999999999988777665 78999999999998 677777799999999999999995 6665 89999
Q ss_pred ccceeecCCCcccccCCCC
Q 036229 666 YLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 666 ~L~~l~ls~N~l~~~~p~~ 684 (982)
+|++|++++|++.|.+|..
T Consensus 498 ~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 498 SLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TCCCEECCSCCBCCCHHHH
T ss_pred CCCEEEecCCCcCCCcchH
Confidence 9999999999999988754
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.1e-46 Score=447.32 Aligned_cols=464 Identities=20% Similarity=0.237 Sum_probs=264.6
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccC
Q 036229 84 KVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYN 163 (982)
Q Consensus 84 ~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 163 (982)
+.+++++++++ .+|..+. ++|++|||++|.+++..|.+|..+++|++|+|++|++++..|..|.++++|++|||++|
T Consensus 34 ~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 77899999999 4887665 89999999999999777789999999999999999999888889999999999999999
Q ss_pred cccccCchhhhcCCCCCCeeeecceeeecc-cCCCccCcCcccEEEeeccccccccccccccccch--hhhhccCCCC--
Q 036229 164 ALSGEIPANICSNLPFLESISLSQNMFHGR-IPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKL--KELYLGYSGL-- 238 (982)
Q Consensus 164 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 238 (982)
.++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|+|++|++++. .+..+++| ++|++++|++
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 998 78876 689999999999999873 467889999999999999988753 44455555 7888888877
Q ss_pred CCchhhhcCCCc--ccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCcc-----cc
Q 036229 239 QGEIPREFGNLA--ELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNK-----LV 311 (982)
Q Consensus 239 ~~~~~~~~~~l~--~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-----l~ 311 (982)
++..|..+..+. .+ .++++.|.+.+.+++. .+..+++|+.|++++|+ +.
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~-----------------------~~~~l~~L~~L~l~~n~~~~~~l~ 239 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNM-----------------------SVNALGHLQLSNIKLNDENCQRLM 239 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEE-----------------------EESSEEEEEEEEEECCSTTHHHHH
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhh-----------------------cccccceEEEecccccccccchHH
Confidence 666666665543 22 3344555544433321 23344455555555543 11
Q ss_pred ccCcccccCCCCCceeecCCCcCCCCcCc--cccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCC
Q 036229 312 GAVPATIFNMSTLTGLGLQSNSLSGSLSS--IADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPN 389 (982)
Q Consensus 312 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~ 389 (982)
+. ...+..++.|+.|+++++.+.+.... ......++|++|++++|++++.+|..++...
T Consensus 240 ~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~------------------ 300 (562)
T 3a79_B 240 TF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYS------------------ 300 (562)
T ss_dssp HH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCC------------------
T ss_pred HH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcc------------------
Confidence 11 12233344443333333222110000 0000112344444444444444444331100
Q ss_pred ccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcc
Q 036229 390 TFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKE 469 (982)
Q Consensus 390 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~ 469 (982)
...++.|+.++++.|.+ .++.+. ...+-...+|++|++++|.+..... .....+|++|++++|++++..|..
T Consensus 301 -~~~L~~L~~~~~~~~~~-~~p~~~--~~~~~~~~~L~~L~l~~n~~~~~~~----~~~l~~L~~L~l~~n~l~~~~~~~ 372 (562)
T 3a79_B 301 -ETALKSLMIEHVKNQVF-LFSKEA--LYSVFAEMNIKMLSISDTPFIHMVC----PPSPSSFTFLNFTQNVFTDSVFQG 372 (562)
T ss_dssp -SCSCCEEEEEEEEECCC-SSCHHH--HHHHHHTCCCSEEEEESSCCCCCCC----CSSCCCCCEEECCSSCCCTTTTTT
T ss_pred -cccchheehhhccccee-ecChhh--hhhhhccCcceEEEccCCCcccccC----ccCCCCceEEECCCCccccchhhh
Confidence 03344444444444433 111110 0001011346677777776543210 011223444444444444444444
Q ss_pred cccccccceEEecCCCCCCCC--CccccCcCCCCeEEeeccCCCCCCCc-ccCCCccccEEEccCCcCCcCCCccccCCC
Q 036229 470 IGNLTNLIGIYLGGNKLNGSI--PITLGKLQKLQGLHLEDNKLEGPIPD-DICRLTKLYELGLSGNKLSGSIPACFSNLA 546 (982)
Q Consensus 470 ~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (982)
+.++++|+.|++++|++++.. |..|.++++|++|+|++|++++.+|. .+..+++|++|++++|+|++..|..+.
T Consensus 373 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--- 449 (562)
T 3a79_B 373 CSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--- 449 (562)
T ss_dssp CCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC---
T ss_pred hcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc---
Confidence 445555555555555554321 23344445555555555555442222 344444455555555544443333322
Q ss_pred cccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccc
Q 036229 547 SLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGY 626 (982)
Q Consensus 547 ~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~ 626 (982)
++|++|++++|+++ .+|..+..+++|+.|||++|+++++.+..|..+++|++|+|++
T Consensus 450 ----------------------~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 450 ----------------------PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp ----------------------TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred ----------------------CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 34555555555554 3444444566666666666666644333477788888888888
Q ss_pred ccccCCcc
Q 036229 627 NRLQGSIS 634 (982)
Q Consensus 627 N~l~~~~~ 634 (982)
|++++..+
T Consensus 507 N~~~c~c~ 514 (562)
T 3a79_B 507 NPWDCTCP 514 (562)
T ss_dssp CCBCCCHH
T ss_pred CCcCCCcc
Confidence 88876554
No 25
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.9e-44 Score=397.53 Aligned_cols=293 Identities=34% Similarity=0.529 Sum_probs=273.7
Q ss_pred CCChhHHHHHHHHHHHhcCCCCccccCCCCCCCCCCc--eeeEEecCCC--CcEEEEEeCCCCccc--cCCccccCCCCC
Q 036229 34 SSITTDQDALLALKAHITHDPTNFLAKNWNTSTPVCN--WTGVTCDVHS--HRVKVLNISHLNLTG--TIPSQLWNLSSL 107 (982)
Q Consensus 34 ~~~~~~~~~ll~~k~~~~~~~~~~~~~~w~~~~~~c~--w~gv~c~~~~--~~v~~L~l~~~~l~g--~~~~~l~~l~~L 107 (982)
.|.++|++||++||+++.+ +. .+++|+.+++||. |.||+|+... ++|+.|+|++++++| .+|+.++++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~--~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGN--PT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTC--CG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcCC--cc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 5999999999999999964 33 6899998889999 9999998544 799999999999999 999999999999
Q ss_pred CEEEcCC-CCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeec
Q 036229 108 QSLNLGF-NRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLS 186 (982)
Q Consensus 108 ~~L~L~~-n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls 186 (982)
++|+|++ |.+.+.+|.+++++++|++|+|++|++++.+|..+.++++|++|||++|.+++.+|..+ ..+++|++|+|+
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI-SSLPNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGG-GGCTTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHH-hcCCCCCeEECc
Confidence 9999995 99999999999999999999999999999999999999999999999999998888887 889999999999
Q ss_pred ceeeecccCCCccCcC-cccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCc
Q 036229 187 QNMFHGRIPSALSNCK-YLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGE 265 (982)
Q Consensus 187 ~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 265 (982)
+|++++.+|..+..++ +|++|+|++|++++.+|..+..++ |++|++++|++++..|..|..+++|+.|++++|++++.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 9999999999999998 999999999999999999999997 99999999999999999999999999999999999977
Q ss_pred CChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCc
Q 036229 266 IPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNS 333 (982)
Q Consensus 266 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 333 (982)
+|. +..+++|++|+|++|+|++.+|..|..+++|++|+|++|++++.+|.. ..+++|+.+++++|+
T Consensus 237 ~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 237 LGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 766 888999999999999999999999999999999999999999988876 778888888888887
No 26
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.1e-43 Score=407.10 Aligned_cols=404 Identities=26% Similarity=0.263 Sum_probs=227.5
Q ss_pred CCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEe
Q 036229 177 LPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMA 256 (982)
Q Consensus 177 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 256 (982)
.++|++|++++|.+ +.+|.+++++++|++|++++|+++|.+|.+++++++|+.+++..|.. .+++.|+
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 45566666666666 45666666666666666666666666666666666666665554421 2344555
Q ss_pred ccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCC
Q 036229 257 LQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSG 336 (982)
Q Consensus 257 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 336 (982)
+++|.+++. |.. .++|++|++++|++++ +|.. .++|++|++++|+++ +
T Consensus 78 l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~------------------------~ 125 (454)
T 1jl5_A 78 LNNLGLSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK------------------------A 125 (454)
T ss_dssp CTTSCCSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS------------------------C
T ss_pred ecCCccccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccC------------------------c
Confidence 555555431 221 2345555555555543 2322 134444555544444 3
Q ss_pred CcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccc
Q 036229 337 SLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSF 416 (982)
Q Consensus 337 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 416 (982)
... ..++|++|++++|++++ +| .+.++++|++|++++|++++ +|..+ ++|+.|++++|+++.++
T Consensus 126 l~~-----~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~----- 189 (454)
T 1jl5_A 126 LSD-----LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEELP----- 189 (454)
T ss_dssp CCS-----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-----
T ss_pred ccC-----CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcCc-----
Confidence 211 01456667777776665 44 46667777777777777765 33332 36777777777776542
Q ss_pred cccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccC
Q 036229 417 LSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGK 496 (982)
Q Consensus 417 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 496 (982)
.|.++++|++|++++|++++++. ...+|++|++++|+++ .+| .++.+++|+.|++++|++++ +|..
T Consensus 190 --~~~~l~~L~~L~l~~N~l~~l~~------~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--- 255 (454)
T 1jl5_A 190 --ELQNLPFLTAIYADNNSLKKLPD------LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--- 255 (454)
T ss_dssp --CCTTCTTCCEEECCSSCCSSCCC------CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---
T ss_pred --cccCCCCCCEEECCCCcCCcCCC------CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---
Confidence 26677777788888887776432 1247888888888887 455 48888999999999999986 4432
Q ss_pred cCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEec
Q 036229 497 LQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNF 576 (982)
Q Consensus 497 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L 576 (982)
+++|+.|++++|++++ +|.. +++|+.|++++|++++. |.. .++|++|++++|+++.+|.. .++|++|++
T Consensus 256 ~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~~~---~~~L~~L~L 324 (454)
T 1jl5_A 256 PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLCDL---PPSLEELNV 324 (454)
T ss_dssp CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEECCC---CTTCCEEEC
T ss_pred ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcccCC---cCcCCEEEC
Confidence 3789999999999986 5543 37889999999998863 221 26788999999998876632 247888899
Q ss_pred CCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccC--CccccccCCCCCCeeeCCCCcCC
Q 036229 577 SSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQG--SISESFGDLISLKSLNLSNNNLS 654 (982)
Q Consensus 577 s~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~ 654 (982)
++|++++ +|.. +++|+.||+++|++++ +|. .+++|++|+|++|++++ .+|.+++++ +.|++.
T Consensus 325 s~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~ 388 (454)
T 1jl5_A 325 SNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHL 388 (454)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC--
T ss_pred CCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccc
Confidence 9998886 4543 4778888888888875 454 46888889999988887 566665533 346666
Q ss_pred CCCCcccccccccceeecCCCcccc--cCCCC
Q 036229 655 RSIPISLEKLSYLEDLDLSFNKLKG--EIPKG 684 (982)
Q Consensus 655 ~~~p~~l~~l~~L~~l~ls~N~l~~--~~p~~ 684 (982)
|.+|.. +++|++||+++|+++| .+|..
T Consensus 389 ~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s 417 (454)
T 1jl5_A 389 AEVPEL---PQNLKQLHVETNPLREFPDIPES 417 (454)
T ss_dssp --------------------------------
T ss_pred cccccc---cCcCCEEECCCCcCCccccchhh
Confidence 777753 4678888899998887 77754
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.7e-43 Score=409.45 Aligned_cols=423 Identities=21% Similarity=0.228 Sum_probs=171.0
Q ss_pred cCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCC
Q 036229 102 WNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLE 181 (982)
Q Consensus 102 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~ 181 (982)
...++|++|++++|.+ |.+|++++++++|++|++++|+++|.+|..++++++|+.++++.|.. .+++
T Consensus 8 ~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~------------~~l~ 74 (454)
T 1jl5_A 8 VSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD------------RQAH 74 (454)
T ss_dssp ---------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH------------HTCS
T ss_pred cccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc------------cCCC
Confidence 3457888888888888 78888888888888888888888888888888888887777776642 3567
Q ss_pred eeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccc
Q 036229 182 SISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSN 261 (982)
Q Consensus 182 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 261 (982)
+|++++|++++ +|.. .++|++|++++|++++ +|..+ ++|++|++++|++++. |.. .++|+.|++++|+
T Consensus 75 ~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~ 142 (454)
T 1jl5_A 75 ELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQ 142 (454)
T ss_dssp EEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSC
T ss_pred EEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCC
Confidence 77777777775 3332 2567777777777775 55432 5666677777766642 111 1345555555555
Q ss_pred cCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCcc
Q 036229 262 LQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSI 341 (982)
Q Consensus 262 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 341 (982)
+++ +| .|+++++|++|++++|++++ +|..+ ++|++|++++|++++ +| .+.++++|
T Consensus 143 l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L----------------- 197 (454)
T 1jl5_A 143 LEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFL----------------- 197 (454)
T ss_dssp CSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTC-----------------
T ss_pred CCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCC-----------------
Confidence 543 33 35555555555555555543 23221 245555555555543 23 23444444
Q ss_pred ccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCC
Q 036229 342 ADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFS 421 (982)
Q Consensus 342 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 421 (982)
++|++++|++++ +|.. .++|++|++++|+++. +| .++.+++|+.|++++|+++.++.
T Consensus 198 --------~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l~~--------- 254 (454)
T 1jl5_A 198 --------TAIYADNNSLKK-LPDL---PLSLESIVAGNNILEE-LP-ELQNLPFLTTIYADNNLLKTLPD--------- 254 (454)
T ss_dssp --------CEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCS---------
T ss_pred --------CEEECCCCcCCc-CCCC---cCcccEEECcCCcCCc-cc-ccCCCCCCCEEECCCCcCCcccc---------
Confidence 333333333332 1211 1244444444444442 22 13333333333333333322110
Q ss_pred CCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCC
Q 036229 422 NCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQ 501 (982)
Q Consensus 422 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 501 (982)
.+++|++|++++|+++++ |.. .++|+.|++++|++++.. .. .++|+
T Consensus 255 ~~~~L~~L~l~~N~l~~l---------------------------~~~---~~~L~~L~ls~N~l~~l~-~~---~~~L~ 300 (454)
T 1jl5_A 255 LPPSLEALNVRDNYLTDL---------------------------PEL---PQSLTFLDVSENIFSGLS-EL---PPNLY 300 (454)
T ss_dssp CCTTCCEEECCSSCCSCC---------------------------CCC---CTTCCEEECCSSCCSEES-CC---CTTCC
T ss_pred cccccCEEECCCCccccc---------------------------Ccc---cCcCCEEECcCCccCccc-Cc---CCcCC
Confidence 012333444444433322 111 134445555555554311 10 13455
Q ss_pred eEEeeccCCCCCCCcccCCC-ccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCc
Q 036229 502 GLHLEDNKLEGPIPDDICRL-TKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNF 580 (982)
Q Consensus 502 ~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~ 580 (982)
.|++++|++++ ++ .+ ++|++|++++|++++ +|.. +++|++|++++|+++++|.
T Consensus 301 ~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp~----------------- 354 (454)
T 1jl5_A 301 YLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVPE----------------- 354 (454)
T ss_dssp EEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCC-----------------
T ss_pred EEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccccc-----------------
Confidence 55555555553 11 11 345555555555553 3332 3455555555555555544
Q ss_pred ccCCCccccccccccceeecccccccc--cccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCC--C
Q 036229 581 FTGPLPLDIGNLKVLIGIDFSTNNFSD--VIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSR--S 656 (982)
Q Consensus 581 l~~~~~~~~~~l~~L~~Ldls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~ 656 (982)
.+++|+.||+++|++++ .+|..++. |+.|.+.+.+|.. +++|+.||+++|++++ .
T Consensus 355 ----------~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~ 413 (454)
T 1jl5_A 355 ----------LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPD 413 (454)
T ss_dssp ----------CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC------------------------------
T ss_pred ----------hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCcccc
Confidence 13344445555555544 34444332 2345555666653 4567778888888776 5
Q ss_pred CCcccccccccceeecCCCcccccCCCC
Q 036229 657 IPISLEKLSYLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 657 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 684 (982)
+|.+ ++.|.+++|.+.+.+|..
T Consensus 414 iP~s------l~~L~~~~~~~~~~~~~~ 435 (454)
T 1jl5_A 414 IPES------VEDLRMNSERVVDPYEFA 435 (454)
T ss_dssp ----------------------------
T ss_pred chhh------HhheeCcCcccCCccccC
Confidence 5543 555667778877766643
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3e-42 Score=402.11 Aligned_cols=215 Identities=20% Similarity=0.257 Sum_probs=118.2
Q ss_pred CCCceee--EEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCc
Q 036229 67 PVCNWTG--VTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGA 144 (982)
Q Consensus 67 ~~c~w~g--v~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 144 (982)
..|.|.+ |.|+ +++++ .+|. + .++|++|||++|.+++..|..+.++++|++|+|++|.+.+.
T Consensus 6 ~~c~~~~~~~~c~------------~~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 6 SECSVIGYNAICI------------NRGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp -CCEEETTEEECC------------SSCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ceeEEEccccCcC------------CCCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 3577766 5555 33444 4554 2 25677777777777766676777777777777777776654
Q ss_pred c-CccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCC--CccCcCcccEEEeeccccccccccc
Q 036229 145 F-PSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPS--ALSNCKYLEILSLSINNLLGAIPKE 221 (982)
Q Consensus 145 ~-p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~ 221 (982)
+ |..|.++++|++|||++|.+++..|..+ .++++|++|+|++|++++..|. .|+++++|++|+|++|++++..|..
T Consensus 70 i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 148 (455)
T 3v47_A 70 IRNNTFRGLSSLIILKLDYNQFLQLETGAF-NGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPAS 148 (455)
T ss_dssp ECTTTTTTCTTCCEEECTTCTTCEECTTTT-TTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCG
T ss_pred ECcccccccccCCEEeCCCCccCccChhhc-cCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCccc
Confidence 4 3346666666666666666653333333 5555566666655555543332 2555555555555555555444443
Q ss_pred -cccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcc-------
Q 036229 222 -IGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPE------- 293 (982)
Q Consensus 222 -~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~------- 293 (982)
+.++++|++|++++|++++..|..+..+. ..+|+.|++++|.+++..+..
T Consensus 149 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~----------------------~~~L~~L~l~~n~l~~~~~~~~~~~~~~ 206 (455)
T 3v47_A 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQ----------------------GKHFTLLRLSSITLQDMNEYWLGWEKCG 206 (455)
T ss_dssp GGGGCTTCCEEECTTCCBSCCCTTTSGGGT----------------------TCEEEEEECTTCBCTTCSTTCTTHHHHC
T ss_pred ccCCCCcccEEeCCCCcccccChhhhhccc----------------------cccccccccccCcccccchhhccccccc
Confidence 44555555555555555444444333320 044555555555555433322
Q ss_pred -ccccCCCcEEEccCccccccCcccccC
Q 036229 294 -IHNLHNLKLLDLSHNKLVGAVPATIFN 320 (982)
Q Consensus 294 -~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 320 (982)
+..+++|++||+++|++++..|..+..
T Consensus 207 ~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 207 NPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp CTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccccceeeeEecCCCcccccchhhhhc
Confidence 224456666666666666555555443
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7e-42 Score=398.95 Aligned_cols=396 Identities=19% Similarity=0.166 Sum_probs=262.5
Q ss_pred CCCCCCCCCCceeeEEecC-CCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCc-chhhhccCCcEEEcc
Q 036229 60 KNWNTSTPVCNWTGVTCDV-HSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIP-SAIFTLYTLKYVNFR 137 (982)
Q Consensus 60 ~~w~~~~~~c~w~gv~c~~-~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p-~~~~~l~~L~~L~Ls 137 (982)
+.|....-.|.+.|++.-. -..+++.|+|++|.+++..|..++++++|++|+|++|.+.+.+| .+|..+++|++|+|+
T Consensus 8 c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 8 CSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp CEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred eEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 4454433347776654421 23579999999999998889999999999999999999987774 578999999999999
Q ss_pred CCcccCccCccccCcCCCCccccccCcccccCch-hhhcCCCCCCeeeecceeeecccCCC-ccCcCcccEEEeeccccc
Q 036229 138 GNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPA-NICSNLPFLESISLSQNMFHGRIPSA-LSNCKYLEILSLSINNLL 215 (982)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~-~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~ 215 (982)
+|++++..|..|+++++|++|+|++|.+++.+|. ..|..+++|++|+|++|++++..|.. |.++++|++|++++|+++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 88 YNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp TCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 9999988899999999999999999999976554 34589999999999999999988876 899999999999999999
Q ss_pred cccccccccc--cchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcc
Q 036229 216 GAIPKEIGNL--TKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPE 293 (982)
Q Consensus 216 ~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 293 (982)
+..|..+..+ .+|+.|++++|.+++..+..++. .....+..+++|++|++++|++++..|..
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~ 231 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKR 231 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHH
T ss_pred ccChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhh
Confidence 9999988877 78999999999998654433220 01112334455666666666666555555
Q ss_pred cccc---CCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCC
Q 036229 294 IHNL---HNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNA 370 (982)
Q Consensus 294 ~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 370 (982)
+... ++|+.|++++|.+.+.... ...+..+. .........++|++|++++|++.+..|..+..+
T Consensus 232 ~~~~~~~~~L~~L~l~~~~~~~~~~~-~~~~~~~~------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 232 FFDAIAGTKIQSLILSNSYNMGSSFG-HTNFKDPD------------NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHHTTTCCEEEEECTTCTTTSCCTT-CCSSCCCC------------TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hhccccccceeeEeeccccccccccc-hhhhccCc------------ccccccccccCceEEEecCccccccchhhcccC
Confidence 5443 5666666666665432110 00011000 000011122455666666666665555555555
Q ss_pred CCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccc
Q 036229 371 SKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSH 450 (982)
Q Consensus 371 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 450 (982)
++|++|++++|++++..|..|..+++|+ +|+|++|++
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~-----------------------------~L~Ls~N~l-------------- 335 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLL-----------------------------KLNLSQNFL-------------- 335 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCC-----------------------------EEECCSSCC--------------
T ss_pred CCCCEEECCCCcccccChhHhcCcccCC-----------------------------EEECCCCcc--------------
Confidence 5666666666655555444444433333 444444422
Q ss_pred cccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEcc
Q 036229 451 SLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLS 530 (982)
Q Consensus 451 ~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 530 (982)
++..|..|..+++|+.|+|++|++++..|.+|.++++|++|+|++|+|++..+..|..+++|++|+++
T Consensus 336 ------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 403 (455)
T 3v47_A 336 ------------GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 403 (455)
T ss_dssp ------------CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred ------------CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEcc
Confidence 22233444555555556666666655555556666666666666666665544555556666666666
Q ss_pred CCcCCcCCC
Q 036229 531 GNKLSGSIP 539 (982)
Q Consensus 531 ~N~l~~~~p 539 (982)
+|++++..|
T Consensus 404 ~N~l~~~~~ 412 (455)
T 3v47_A 404 TNPWDCSCP 412 (455)
T ss_dssp SSCBCCCTT
T ss_pred CCCcccCCC
Confidence 666654443
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.4e-39 Score=376.96 Aligned_cols=357 Identities=15% Similarity=0.125 Sum_probs=170.7
Q ss_pred hhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCc
Q 036229 124 AIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKY 203 (982)
Q Consensus 124 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 203 (982)
.++++++|++|+|++|++++. | .++.+++|++|+|++|.+++ +| ++.+++|++|+|++|++++. | ++++++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~ 107 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D--VTPLTK 107 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--CTTCTT
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--cCCCCc
Confidence 344444444444444444432 2 34444444444444444442 22 23444444444444444432 1 444455
Q ss_pred ccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccC
Q 036229 204 LEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGK 283 (982)
Q Consensus 204 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 283 (982)
|++|++++|++++ +| ++.+++|++|++++|++++. .++.+++|+.|++++|+..+.+ .+..+++|++|++++
T Consensus 108 L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 5555555555543 22 44444555555555554432 1344444444444444333333 244455555555555
Q ss_pred CccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccc
Q 036229 284 NFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTI 363 (982)
Q Consensus 284 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 363 (982)
|++++. | +..+++|+.|++++|++++. .+.. +++|++|++++|++++ +
T Consensus 180 n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~-------------------------l~~L~~L~Ls~N~l~~-i 227 (457)
T 3bz5_A 180 NKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQ-------------------------NIQLTFLDCSSNKLTE-I 227 (457)
T ss_dssp SCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTT-------------------------CTTCSEEECCSSCCSC-C
T ss_pred Ccccee-c--cccCCCCCEEECcCCcCCee---cccc-------------------------CCCCCEEECcCCcccc-c
Confidence 555542 2 44555555555555555432 1222 3444555555555554 3
Q ss_pred cccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCcc
Q 036229 364 PRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRM 443 (982)
Q Consensus 364 p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 443 (982)
| +..+++|++|++++|++++.. +..+++|+ .|++++|+
T Consensus 228 p--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~-----------------------------~L~l~~n~-------- 265 (457)
T 3bz5_A 228 D--VTPLTQLTYFDCSVNPLTELD---VSTLSKLT-----------------------------TLHCIQTD-------- 265 (457)
T ss_dssp C--CTTCTTCSEEECCSSCCSCCC---CTTCTTCC-----------------------------EEECTTCC--------
T ss_pred C--ccccCCCCEEEeeCCcCCCcC---HHHCCCCC-----------------------------EEeccCCC--------
Confidence 3 445556666666666665542 22233333 33333331
Q ss_pred ccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCcc
Q 036229 444 SMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTK 523 (982)
Q Consensus 444 ~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 523 (982)
++.+++++|.+.+.+| ++.+++|+.|++++|...+.+|. ..++|+.|++++| ++
T Consensus 266 --------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~ 319 (457)
T 3bz5_A 266 --------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PK 319 (457)
T ss_dssp --------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TT
T ss_pred --------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------cc
Confidence 2333444444444443 34556666666666665555443 2234444443333 45
Q ss_pred ccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccc
Q 036229 524 LYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTN 603 (982)
Q Consensus 524 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N 603 (982)
|++|++++|+|++. + +.++++|+.|++++|+++.+| .|..|++++|.++|. +.+..|..+|+++|
T Consensus 320 L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~l~-------~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N 384 (457)
T 3bz5_A 320 LVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQDFS-------SVGKIPALNNNFEAE-----GQTITMPKETLTNN 384 (457)
T ss_dssp CCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCBCT-------TGGGSSGGGTSEEEE-----EEEEECCCBCCBTT
T ss_pred CCEEECCCCccccc-c--cccCCcCcEEECCCCCCCCcc-------ccccccccCCcEEec-----ceeeecCccccccC
Confidence 66666666666653 2 556666666666666665532 334445555555543 23444555566666
Q ss_pred ccccccccc
Q 036229 604 NFSDVIPTV 612 (982)
Q Consensus 604 ~l~~~~p~~ 612 (982)
+++|.+|..
T Consensus 385 ~l~g~ip~~ 393 (457)
T 3bz5_A 385 SLTIAVSPD 393 (457)
T ss_dssp BEEEECCTT
T ss_pred cEEEEcChh
Confidence 666655554
No 31
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-40 Score=356.06 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=166.3
Q ss_pred cCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
++|++.+.||+|+||+||+|+. .+++.||||++++. .....+.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999985 46999999999754 2344567899999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|||+||+|.+++.+.+ .+++.++..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 5899999999999999999999 99999999999999999999999999999998755444
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
.......+||+.|||||++.++.|+... |+|+.|+.++.+.+|
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~-DiWSlGvilyeml~G 230 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSS-DLWALGCIIYQLVAG 230 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHH-HHHHHHHHHHHHHHS
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHH-HHHHHHHHHHHHHhC
Confidence 4445667899999999999888777553 233444444444443
No 32
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=374.95 Aligned_cols=328 Identities=23% Similarity=0.202 Sum_probs=273.1
Q ss_pred CCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccc
Q 036229 347 PNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSL 426 (982)
Q Consensus 347 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 426 (982)
++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|+.|++++|.++.++.. .|.++++|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L 106 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLSNL 106 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCTTC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCCCC
Confidence 3557777777777777777788888888888888888877777788877777777777777765543 25666666
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEee
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLE 506 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 506 (982)
++|+|++|+ +.+..|..|..+++|+.|++++|++++..|..|.++++|++|+|+
T Consensus 107 ~~L~Ls~n~--------------------------i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 107 TKLDISENK--------------------------IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CEEECTTSC--------------------------CCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CEEECCCCc--------------------------cccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 666666664 444566778888899999999999998888899999999999999
Q ss_pred ccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCccc-ccccccccccCceEEecCCCcccCCC
Q 036229 507 DNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLT-SIPLTIWNLKGMLYLNFSSNFFTGPL 585 (982)
Q Consensus 507 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~Ls~N~l~~~~ 585 (982)
+|++++..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|.+. .+|...+...+|++|++++|++++..
T Consensus 161 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 240 (477)
T 2id5_A 161 KCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 240 (477)
T ss_dssp SCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCC
T ss_pred CCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccC
Confidence 99999777778889999999999999999888888999999999999997655 78887777779999999999999766
Q ss_pred ccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccccc
Q 036229 586 PLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLS 665 (982)
Q Consensus 586 ~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 665 (982)
+..+..+++|+.|||++|.+++..+..|..+++|++|+|++|++++..|.+|.++++|+.|+|++|+|++..+..|..++
T Consensus 241 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 320 (477)
T 2id5_A 241 YLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVG 320 (477)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGG
T ss_pred HHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCc
Confidence 67889999999999999999998888999999999999999999999999999999999999999999987777889999
Q ss_pred ccceeecCCCcccccCCCCCCCCCCCCcccccCcccCCCC
Q 036229 666 YLEDLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 666 ~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
+|++|+|++|++.|.++..+.+.......+.++...|+.|
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 9999999999999887654323333345677888888766
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.7e-38 Score=364.83 Aligned_cols=346 Identities=28% Similarity=0.442 Sum_probs=226.5
Q ss_pred CcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceee
Q 036229 249 LAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLG 328 (982)
Q Consensus 249 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 328 (982)
+++++.|+++++.+.. +| .+..+++|++|+|++|.+++..| +.++++|++|++++|++++..+ +.++++|
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L---- 114 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNL---- 114 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTC----
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCC----
Confidence 4556666666666653 33 25566666666666666664433 6666666666666666654333 5555555
Q ss_pred cCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccc
Q 036229 329 LQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLT 408 (982)
Q Consensus 329 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 408 (982)
++|++++|++++..+ +..+++|++|++++|++++.. .+..+++|+.|+++ |.+.
T Consensus 115 ---------------------~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~ 168 (466)
T 1o6v_A 115 ---------------------TGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVT 168 (466)
T ss_dssp ---------------------CEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCC
T ss_pred ---------------------CEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh--hhccCCcccEeecC-Cccc
Confidence 555555555443322 555556666666666555431 35555555555554 2222
Q ss_pred cCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCC
Q 036229 409 SSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNG 488 (982)
Q Consensus 409 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 488 (982)
.. ..+.++++|++|++++|++.++ ..+..+++|+.|++++|++++
T Consensus 169 ~~-------~~~~~l~~L~~L~l~~n~l~~~----------------------------~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 169 DL-------KPLANLTTLERLDISSNKVSDI----------------------------SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp CC-------GGGTTCTTCCEEECCSSCCCCC----------------------------GGGGGCTTCSEEECCSSCCCC
T ss_pred Cc-------hhhccCCCCCEEECcCCcCCCC----------------------------hhhccCCCCCEEEecCCcccc
Confidence 21 1255566666666666655432 124556666667777776665
Q ss_pred CCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccc
Q 036229 489 SIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNL 568 (982)
Q Consensus 489 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l 568 (982)
..| ++.+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|++++|+++.+|. +..+
T Consensus 214 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l 286 (466)
T 1o6v_A 214 ITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGL 286 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTC
T ss_pred ccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCC
Confidence 544 55667777777777777643 356667777777777777765544 6677777777777777776665 5667
Q ss_pred cCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeC
Q 036229 569 KGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNL 648 (982)
Q Consensus 569 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 648 (982)
++|++|++++|++++..+ ++.+++|+.|++++|++++..| ++.+++|++|++++|++++. ..+.++++|+.|++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 360 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSA 360 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEEC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeC
Confidence 777777777777776544 6778888888888888887765 67888899999999988865 46888899999999
Q ss_pred CCCcCCCCCCcccccccccceeecCCCccccc
Q 036229 649 SNNNLSRSIPISLEKLSYLEDLDLSFNKLKGE 680 (982)
Q Consensus 649 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 680 (982)
++|++++..| +..+++|+.|++++|++++.
T Consensus 361 ~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 361 GHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp CSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 9999987766 78888999999999999863
No 34
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2.4e-38 Score=366.48 Aligned_cols=362 Identities=20% Similarity=0.197 Sum_probs=213.4
Q ss_pred CCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccc
Q 036229 239 QGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATI 318 (982)
Q Consensus 239 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 318 (982)
.+..+..++++++|+.|++++|.+++. | .+..+++|++|+|++|++++. | +..+++|++|++++|++++. | +
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~ 102 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--V 102 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--C
T ss_pred CcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--c
Confidence 333344444455555555555555432 2 345555555555555555543 2 44555555555555555432 2 4
Q ss_pred cCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccc
Q 036229 319 FNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLR 398 (982)
Q Consensus 319 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 398 (982)
.++++|+.|++++|.+++. ....+++|++|++++|++++. + +..+++|++|++++|+..+.+ .+..+++|+
T Consensus 103 ~~l~~L~~L~L~~N~l~~l----~~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 103 TPLTKLTYLNCDTNKLTKL----DVSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp TTCTTCCEEECCSSCCSCC----CCTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred CCCCcCCEEECCCCcCCee----cCCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 4455555555555544432 133445555555555555542 1 445555555555555333222 244555555
Q ss_pred eecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccce
Q 036229 399 LMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIG 478 (982)
Q Consensus 399 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~ 478 (982)
.|++++|.++.++ +..+++|+.|++++|+++++. +.. .++|++|++++|++++ +| ++.+++|+.
T Consensus 174 ~L~ls~n~l~~l~--------l~~l~~L~~L~l~~N~l~~~~----l~~-l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~ 237 (457)
T 3bz5_A 174 TLDCSFNKITELD--------VSQNKLLNRLNCDTNNITKLD----LNQ-NIQLTFLDCSSNKLTE-ID--VTPLTQLTY 237 (457)
T ss_dssp EEECCSSCCCCCC--------CTTCTTCCEEECCSSCCSCCC----CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCSE
T ss_pred EEECCCCccceec--------cccCCCCCEEECcCCcCCeec----ccc-CCCCCEEECcCCcccc-cC--ccccCCCCE
Confidence 5555555554432 344555555555555554431 111 1334444444445544 23 555566666
Q ss_pred EEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcc
Q 036229 479 IYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKL 558 (982)
Q Consensus 479 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 558 (982)
|++++|++++.. ++.+++|+.|++++| +|+.|++++|++.+.+| +.++++|+.|++++|..
T Consensus 238 L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~ 298 (457)
T 3bz5_A 238 FDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQ 298 (457)
T ss_dssp EECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTT
T ss_pred EEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcc
Confidence 666666666543 234455556655554 34556777777766665 46778888888888865
Q ss_pred c-ccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccc
Q 036229 559 T-SIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESF 637 (982)
Q Consensus 559 ~-~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 637 (982)
. .+|. ...+|+.|++++| ++|+.|++++|++++. + ++.+++|+.|++++|+|++
T Consensus 299 l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~------ 353 (457)
T 3bz5_A 299 LYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD------ 353 (457)
T ss_dssp CCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB------
T ss_pred cceecc---CCCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC------
Confidence 4 5663 3345555555554 6788999999999985 3 8899999999999999986
Q ss_pred cCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCC
Q 036229 638 GDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 638 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 684 (982)
++.|..|++++|+++|. ..+..|+.+++++|+|+|.||..
T Consensus 354 --l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 354 --FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp --CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred --ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChh
Confidence 35677889999999875 35677889999999999999975
No 35
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.8e-40 Score=357.45 Aligned_cols=192 Identities=24% Similarity=0.282 Sum_probs=164.6
Q ss_pred cCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEec
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
+.|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|++++++++|||||++++++++++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56999999999999999999864 69999999998766666778999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCcee
Q 036229 859 PHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSIT 938 (982)
Q Consensus 859 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 938 (982)
+||+|.+++.+. .+++.++..|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999999764 4899999999999999999999 9999999999999999999999999999999864332 23
Q ss_pred ecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 939 QTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
....+||+.|||||++.+..|+.. .|+|++|+.++.+.+|
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~-~DiWSlGvilyeml~G 266 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPE-VDIWSLGIMVIEMVDG 266 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTH-HHHHHHHHHHHHHHHS
T ss_pred ccccccCcCcCCHHHHCCCCCCcH-HHHHHHHHHHHHHHHC
Confidence 346789999999999988777654 2233444444444443
No 36
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.7e-37 Score=362.48 Aligned_cols=351 Identities=29% Similarity=0.442 Sum_probs=250.8
Q ss_pred ccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcE
Q 036229 223 GNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKL 302 (982)
Q Consensus 223 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 302 (982)
..+++++.|++++|.++. +| .+..+++|+.|++++|.+++..| +.++++|++|++++|++++..+ +.++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 457889999999999985 45 48889999999999999997654 9999999999999999997655 999999999
Q ss_pred EEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEecccc
Q 036229 303 LDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNS 382 (982)
Q Consensus 303 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 382 (982)
|++++|++++..+ +..+++|+.|++++|.+.+. + .+..+++|++|+++ |.
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--------------------------~-~~~~l~~L~~L~l~-~~ 166 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--------------------------S-ALSGLTSLQQLSFG-NQ 166 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC--------------------------G-GGTTCTTCSEEEEE-ES
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCCC--------------------------h-hhccCCcccEeecC-Cc
Confidence 9999999986543 67777776666666655432 1 24444555555553 33
Q ss_pred CccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCcc
Q 036229 383 FSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNV 462 (982)
Q Consensus 383 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l 462 (982)
+.+..+ +..+++|+.|++++|.++.++ .+..+++|++|++++|++.++.+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~~~~~--------------------- 216 (466)
T 1o6v_A 167 VTDLKP--LANLTTLERLDISSNKVSDIS-------VLAKLTNLESLIATNNQISDITP--------------------- 216 (466)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCCG-------GGGGCTTCSEEECCSSCCCCCGG---------------------
T ss_pred ccCchh--hccCCCCCEEECcCCcCCCCh-------hhccCCCCCEEEecCCccccccc---------------------
Confidence 333221 555555555555555554432 24556667777777776554321
Q ss_pred ccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccc
Q 036229 463 SGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACF 542 (982)
Q Consensus 463 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 542 (982)
++.+++|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++..+ +
T Consensus 217 -------~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~ 283 (466)
T 1o6v_A 217 -------LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--L 283 (466)
T ss_dssp -------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--G
T ss_pred -------ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--c
Confidence 34455666666666666643 346666777777777777765443 6667777777777777765443 6
Q ss_pred cCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceE
Q 036229 543 SNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYL 622 (982)
Q Consensus 543 ~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L 622 (982)
..+++|++|+|++|+++.++. +..+++|++|++++|++++..| +..+++|+.|++++|++++. ..++.+++|++|
T Consensus 284 ~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 284 AGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp TTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred cCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 677777777777777776665 5667777777777777777655 67788888888888888775 468888999999
Q ss_pred ecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcc
Q 036229 623 FLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPIS 660 (982)
Q Consensus 623 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 660 (982)
++++|++++.+| +..+++|+.|++++|++++ +|..
T Consensus 359 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~~ 393 (466)
T 1o6v_A 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APVN 393 (466)
T ss_dssp ECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCBC
T ss_pred eCCCCccCccch--hhcCCCCCEEeccCCcccC-Cchh
Confidence 999999988776 8888999999999999886 4543
No 37
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.4e-40 Score=353.98 Aligned_cols=189 Identities=26% Similarity=0.420 Sum_probs=162.0
Q ss_pred cCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56888999999999999999853 478899999987666677889999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcC------------CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEE
Q 036229 854 ILEYMPHGSLEKSLYSS------------NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHL 921 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~------------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL 921 (982)
|||||++|+|.++++.. ...+++.++..|+.||+.||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 99999999999999753 246899999999999999999999 999999999999999999999999
Q ss_pred EeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 922 SDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 922 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
+|||+|+.....+.........||+.|||||++.++.++.. +|+||+|++
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k---~DVwS~Gvv 219 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTE---SDVWSLGVV 219 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCch---hhHHHHHHH
Confidence 99999987644443334445679999999999988777644 566676643
No 38
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=354.09 Aligned_cols=189 Identities=25% Similarity=0.415 Sum_probs=154.6
Q ss_pred cCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
++|...++||+|+||+||+|++. +++.||||+++.......++|.+|++++++++|||||+++++|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46778899999999999999863 478999999987666677889999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCC--------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcE
Q 036229 854 ILEYMPHGSLEKSLYSSN--------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 919 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 919 (982)
|||||++|+|.++++... ..+++.++..|+.||+.||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997532 35899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 920 HLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
||+|||+|+.....+.........||+.|||||++.+..++.. +|+||||++
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~---sDvwS~Gvv 249 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTE---SDVWSFGVV 249 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHH---HHHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcc---ccccchHHH
Confidence 9999999997654444444456789999999999988777644 566677643
No 39
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-39 Score=357.27 Aligned_cols=193 Identities=19% Similarity=0.323 Sum_probs=157.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||+||+|+. .+|+.||||+++.. .....+++.+|++++++++|||||++++++++++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36899999999999999999986 46999999999754 3345678999999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 856 EYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+||+|.+++...+ ..+++.+++.|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~-- 177 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS-- 177 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH--
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC--
Confidence 9999999999997543 45789999999999999999999 99999999999999999999999999999997622
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
........+||+.|||||++.++.|+.. +|+||+| ++.+.+|
T Consensus 178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~---~DiwSlGvilyemltG 221 (350)
T 4b9d_A 178 TVELARACIGTPYYLSPEICENKPYNNK---SDIWALGCVLYELCTL 221 (350)
T ss_dssp HHHHHHHHHSCCTTCCHHHHTTCCCCHH---HHHHHHHHHHHHHHHS
T ss_pred CcccccccCCCccccCHHHHCCCCCCcH---HHHHHHHHHHHHHHHC
Confidence 1122345689999999999988877654 4445555 4444443
No 40
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=348.89 Aligned_cols=190 Identities=25% Similarity=0.420 Sum_probs=154.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++++..++||+|+||+||+|++++ .||||+++.. .....++|.+|++++++++|||||++++++.. +..++||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 45678899999999999999998743 5999998743 33456789999999999999999999998865 5689999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|||++|+|.+++...+..+++.++..|+.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999999877777999999999999999999999 99999999999999999999999999999987644333
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......+||+.|||||++.+......+..+|+||+|+
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gv 225 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI 225 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHH
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHH
Confidence 33445678999999999996543333334566777774
No 41
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=359.46 Aligned_cols=193 Identities=25% Similarity=0.289 Sum_probs=165.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.+.|+..++||+|+||+||+|+.. +|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999864 5999999999877666678899999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
|+||+|.+++... .+++.++..|+.||+.||+||| ++|||||||||+|||++.+|.+||+|||+|+.+.... .
T Consensus 230 ~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 302 (423)
T 4fie_A 230 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 302 (423)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--C
T ss_pred CCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--c
Confidence 9999999999754 4899999999999999999999 9999999999999999999999999999999874332 2
Q ss_pred eecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 938 TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
.....+||+.|||||++.+..|+... |+|++|+.++.+.+|
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~-DiWSlGvilyeml~G 343 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEV-DIWSLGIMVIEMVDG 343 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHH-HHHHHHHHHHHHHHS
T ss_pred cccccccCcCcCCHHHHCCCCCCcHH-HHHHHHHHHHHHHHC
Confidence 33467899999999999888776542 233444444444444
No 42
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.6e-39 Score=340.12 Aligned_cols=193 Identities=20% Similarity=0.331 Sum_probs=147.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||+||+|+. .+++.||||+++.. .....+++.+|++++++++||||+++++++++++..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999985 46999999999754 233456789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+ +|+|.+++.+.+ .+++.++..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp EECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 9999 679999997654 5899999999999999999999 999999999999999999999999999999875322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
......+||+.|||||++.+..+.....|+|++|+.++.+.+|
T Consensus 166 --~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg 208 (275)
T 3hyh_A 166 --NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHS
T ss_pred --CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHC
Confidence 2234578999999999998876543223333444444444444
No 43
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.4e-38 Score=345.93 Aligned_cols=190 Identities=23% Similarity=0.368 Sum_probs=160.1
Q ss_pred cCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
++++..++||+|+||+||+|++. +++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34667789999999999999852 47899999997543 344578999999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHhcCC---------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC
Q 036229 853 LILEYMPHGSLEKSLYSSN---------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM 917 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~ 917 (982)
+|||||++|+|.+++.... ..+++.++.+|+.||++||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996432 35889999999999999999999 99999999999999999999
Q ss_pred cEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeee
Q 036229 918 VAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIF 975 (982)
Q Consensus 918 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l 975 (982)
.+||+|||+|+.....+.........||+.|||||++.++.++.. +|+||||+++
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~k---sDVwSfGvvl 237 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID---SDIWSYGVVL 237 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCcc---chhhhHHHHH
Confidence 999999999997654444444456789999999999987776644 5667777443
No 44
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.7e-39 Score=345.70 Aligned_cols=191 Identities=26% Similarity=0.351 Sum_probs=154.2
Q ss_pred cCCCccceeeeeceEEEEEEEe----CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARI----GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
++|++.+.||+|+||+||+|+. .+++.||||+++... .....++.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999985 247899999997542 2334578899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
|||||+||+|.+++.+.+ .+++.++..++.|++.||+||| ++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 5899999999999999999999 999999999999999999999999999999865332
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
. ......+||+.|||||++.++.++.. +|+||+| ++.+.+|
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~---~DiwSlGvilyemltG 222 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQS---ADWWSFGVLMFEMLTG 222 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTH---HHHHHHHHHHHHHHHS
T ss_pred C--ccccccccCcccCCHHHhccCCCCCC---CcccchHHHHHHHHhC
Confidence 2 23345789999999999988877754 4445555 4444433
No 45
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.5e-37 Score=358.07 Aligned_cols=319 Identities=21% Similarity=0.185 Sum_probs=169.9
Q ss_pred ccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCC
Q 036229 157 HLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYS 236 (982)
Q Consensus 157 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 236 (982)
.++.+++.++ .+|..+ .++++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 15 ~v~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp EEECCSCCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcC-cCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 4455555555 555544 245666666666666655666666666666666666666555666666666666666666
Q ss_pred CCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcc
Q 036229 237 GLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPA 316 (982)
Q Consensus 237 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 316 (982)
++++..+..|.++++|+.|++++|++.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 66544444455555555555555555555555555566666666666666555555555556666666666655544444
Q ss_pred cccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCc
Q 036229 317 TIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRN 396 (982)
Q Consensus 317 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 396 (982)
.+.++++| +.|++++|++.+..+..+..+++|++|++++|.+.+.+|.......
T Consensus 171 ~l~~l~~L-------------------------~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~- 224 (477)
T 2id5_A 171 ALSHLHGL-------------------------IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL- 224 (477)
T ss_dssp HHTTCTTC-------------------------CEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC-
T ss_pred HhcccCCC-------------------------cEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCc-
Confidence 44443333 4444444444443444444445555555555444333222211111
Q ss_pred cceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCccccccccc
Q 036229 397 LRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNL 476 (982)
Q Consensus 397 L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L 476 (982)
+|++|+|++|+ +++..+..+..+++|
T Consensus 225 ----------------------------~L~~L~l~~n~--------------------------l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 225 ----------------------------NLTSLSITHCN--------------------------LTAVPYLAVRHLVYL 250 (477)
T ss_dssp ----------------------------CCSEEEEESSC--------------------------CCSCCHHHHTTCTTC
T ss_pred ----------------------------cccEEECcCCc--------------------------ccccCHHHhcCcccc
Confidence 22233333332 222222334445555
Q ss_pred ceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCC
Q 036229 477 IGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSN 556 (982)
Q Consensus 477 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 556 (982)
+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 330 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSN 330 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCC
Confidence 55555555555555555555555666666666665555555555666666666666665555555555556666666666
Q ss_pred ccc
Q 036229 557 KLT 559 (982)
Q Consensus 557 ~l~ 559 (982)
.++
T Consensus 331 ~l~ 333 (477)
T 2id5_A 331 PLA 333 (477)
T ss_dssp CEE
T ss_pred Ccc
Confidence 555
No 46
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.1e-38 Score=343.63 Aligned_cols=189 Identities=24% Similarity=0.296 Sum_probs=155.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.+.|+..++||+|+||+||+|+.. +|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|+||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 356888899999999999999964 599999999975422 24699999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC-cEEEEeecCceeecCCCCc
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~ 936 (982)
|+||+|.+++++.+ .+++.++..|+.||+.||+||| ++|||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 132 ~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999999997654 5899999999999999999999 99999999999999999887 6999999999987433221
Q ss_pred ---eeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 937 ---ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 937 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
......+||+.|||||++.++.++.. +|+|++| ++.+.+|
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~---~DiwSlGvilyemltG 252 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAK---VDIWSSCCMMLHMLNG 252 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTH---HHHHHHHHHHHHHHHS
T ss_pred cceecCCccccCccccCHHHHCCCCCCcH---HHHHHHHHHHHHHHHC
Confidence 12234679999999999988877654 4445555 4444443
No 47
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-37 Score=337.66 Aligned_cols=189 Identities=22% Similarity=0.378 Sum_probs=147.3
Q ss_pred cCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCC--------
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE-------- 849 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------- 849 (982)
++|++.+.||+|+||+||+|+.. +++.||||+++... ....+++.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999864 69999999997543 334578899999999999999999999986543
Q ss_pred ----eeEEEEEeccCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEe
Q 036229 850 ----FKALILEYMPHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 923 (982)
Q Consensus 850 ----~~~lv~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~D 923 (982)
+.|+|||||++|+|.+++..... ..++..+..|+.||+.||+||| ++|||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 47999999999999999976543 3456678899999999999999 99999999999999999999999999
Q ss_pred ecCceeecCCCCc----------eeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 924 FGIAKLLIGEDQS----------ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 924 FGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
||+|+.+...... ...+..+||+.|||||++.++.++.. +|+||+|++
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~---~DiwSlGvi 219 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK---VDIFSLGLI 219 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTH---HHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCH---HHHHHHHHH
Confidence 9999976433221 12234679999999999988777654 455666643
No 48
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.1e-36 Score=333.27 Aligned_cols=258 Identities=33% Similarity=0.559 Sum_probs=244.1
Q ss_pred ccccEEeccCCcccc--CCCcccccccccceEEecC-CCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccE
Q 036229 450 HSLEYFDMSYCNVSG--GFPKEIGNLTNLIGIYLGG-NKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYE 526 (982)
Q Consensus 450 ~~L~~Ldls~n~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 526 (982)
.+++.|++++|++++ .+|..+.++++|++|++++ |++.+.+|..|+++++|++|+|++|++++.+|..|..+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 357788888888888 8899999999999999995 9999999999999999999999999999999999999999999
Q ss_pred EEccCCcCCcCCCccccCCCcccccccCCCccc-cccccccccc-CceEEecCCCcccCCCccccccccccceeeccccc
Q 036229 527 LGLSGNKLSGSIPACFSNLASLGTLSLGSNKLT-SIPLTIWNLK-GMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNN 604 (982)
Q Consensus 527 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~ip~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~ 604 (982)
|+|++|+|++.+|..|.++++|++|+|++|+++ .+|..++.++ +|++|++++|++++.+|..+..++ |+.|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 999999999999999999999999999999999 8999999988 999999999999999999999998 9999999999
Q ss_pred ccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCC
Q 036229 605 FSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKG 684 (982)
Q Consensus 605 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~ 684 (982)
+++.+|..|+.+++|++|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977776 889999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCCcccccCcccCCCCCCCCCCC
Q 036229 685 GSFGNFSAKSFEGNELLCGSPNLQVPPC 712 (982)
Q Consensus 685 ~~~~~~~~~~~~gn~~lc~~~~~~~~~c 712 (982)
..+..+....+.||+++||.|. ++|
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p~---~~C 312 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSPL---PAC 312 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTTS---SCC
T ss_pred ccccccChHHhcCCCCccCCCC---CCC
Confidence 8888888899999999999884 456
No 49
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-37 Score=332.28 Aligned_cols=185 Identities=25% Similarity=0.374 Sum_probs=152.3
Q ss_pred CccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecC----CCeeEEEE
Q 036229 783 SENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCST----EEFKALIL 855 (982)
Q Consensus 783 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~lv~ 855 (982)
+..++||+|+||+||+|++. +++.||+|++... .....+++.+|++++++++|||||+++++|++ ++..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 56778999999999999864 5899999999754 23445789999999999999999999999864 35689999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEc-CCCcEEEEeecCceeecC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~ 932 (982)
|||+||+|.+++.+.+ .+++..+..|+.||+.||+||| +++ ||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997643 5899999999999999999999 888 99999999999998 479999999999985422
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
......+||+.|||||++.++ ++. .+|+||+| ++.+.+|
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~~-y~~---~~DiwSlGvilyelltg 225 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEEK-YDE---SVDVYAFGMCMLEMATS 225 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGTC-CCT---HHHHHHHHHHHHHHHHS
T ss_pred ----CccCCcccCccccCHHHcCCC-CCc---HHHHHHHHHHHHHHHHC
Confidence 123457899999999999764 443 34556666 4444443
No 50
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=2.2e-36 Score=335.09 Aligned_cols=272 Identities=22% Similarity=0.298 Sum_probs=185.2
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCccccCCC----CCCCCCCceeeEEecC--------CCCcEEEEEeCCCCccccCCcc
Q 036229 33 TSSITTDQDALLALKAHITHDPTNFLAKNW----NTSTPVCNWTGVTCDV--------HSHRVKVLNISHLNLTGTIPSQ 100 (982)
Q Consensus 33 ~~~~~~~~~~ll~~k~~~~~~~~~~~~~~w----~~~~~~c~w~gv~c~~--------~~~~v~~L~l~~~~l~g~~~~~ 100 (982)
..+..+|++||++||+++..| +.++..+| +...++|.|.|+.|+. ..++|+.|+|++++++ .+|+.
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~-~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNAD-RNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHC-CTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred cccCchHHHHHHHHHHhccCC-chhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 457789999999999999776 45577889 5667899999999952 3467889999999888 78888
Q ss_pred ccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhh------
Q 036229 101 LWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANIC------ 174 (982)
Q Consensus 101 l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~------ 174 (982)
++++++|++|+|++|.++ .+|..++.+++|++|+|++|+++ .+|..++++++|++|+|++|.+.+.+|..+.
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 888999999999999888 88888888999999999999888 7788888888888888888888878887652
Q ss_pred --cCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCccc
Q 036229 175 --SNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAEL 252 (982)
Q Consensus 175 --~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 252 (982)
.++++|++|+|++|+++ .+|..++++++|++|+|++|++++ +|..++.+++|++|+|++|.+.+.+|..|+.+++|
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 255 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPL 255 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCC
Confidence 23555555555555555 455555555555555555555552 34445555555555555555555555555555555
Q ss_pred ceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccc
Q 036229 253 ELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKL 310 (982)
Q Consensus 253 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 310 (982)
+.|++++|++.+.+|..+.++++|++|+|++|++.+.+|..+.++++|+.++++.|.+
T Consensus 256 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 256 KRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 5555555555555555555555555555555555545555555555555555444433
No 51
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.7e-37 Score=340.64 Aligned_cols=199 Identities=23% Similarity=0.370 Sum_probs=167.6
Q ss_pred CCHHHHHHHhcCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCC-ccceeE
Q 036229 770 FSYLELCRATNRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRH-RNLIKV 841 (982)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~nIv~l 841 (982)
++..+++...++|++.+.||+|+||+||+|++. .++.||||+++... ....+++.+|++++++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 455677777889999999999999999999853 24789999997543 3345679999999999965 899999
Q ss_pred EeeecCC-CeeEEEEEeccCCChHHHHhcC---------------CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcC
Q 036229 842 ISSCSTE-EFKALILEYMPHGSLEKSLYSS---------------NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCD 905 (982)
Q Consensus 842 ~~~~~~~-~~~~lv~E~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrD 905 (982)
+++|..+ +..++|||||++|+|.++++.. +..+++.++..++.||++||+||| +++|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence 9998664 5789999999999999999753 234789999999999999999999 99999999
Q ss_pred CCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 906 LKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 906 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
|||+|||+++++.+||+|||+|+.+.............||+.|||||++.++.++.. +|+||||++
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~k---sDVwS~Gv~ 276 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVL 276 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCc---ccEeehHHH
Confidence 999999999999999999999997755555555566789999999999988777644 566777743
No 52
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-35 Score=337.53 Aligned_cols=346 Identities=21% Similarity=0.227 Sum_probs=239.6
Q ss_pred cCCCCCCCCCCc----eeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcch-hhhccCCcE
Q 036229 59 AKNWNTSTPVCN----WTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSA-IFTLYTLKY 133 (982)
Q Consensus 59 ~~~w~~~~~~c~----w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~-~~~l~~L~~ 133 (982)
+++|....+||. |.++.|+. + +............-..+.+++.|++++|.++ .+|.. +..+++|++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~---~-----i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~ 73 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDV---H-----IDMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVEL 73 (390)
T ss_dssp ----CCEECBCC------EEEESC---E-----ECSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSE
T ss_pred cCCCCCccceehhhhhhccceeee---e-----eecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcE
Confidence 578988888886 55554441 1 1111111111112234677788888887776 45544 567788888
Q ss_pred EEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccc
Q 036229 134 VNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINN 213 (982)
Q Consensus 134 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 213 (982)
|+|++|++++..|..|..+++|++|+|++|.++ .+|+..|.++++|++|+|++|+++...+..|+++++|++|++++|+
T Consensus 74 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 74 LNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCc
Confidence 888888887666667778888888888888877 4555555778888888888888876555556778888888888888
Q ss_pred cccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcc
Q 036229 214 LLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPE 293 (982)
Q Consensus 214 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 293 (982)
+++..|..+..+++|++|++++|++++. .+..+++|+.+++++|.+++ +...++|++|++++|.++.... .
T Consensus 153 l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~-~ 223 (390)
T 3o6n_A 153 LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRG-P 223 (390)
T ss_dssp CCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEEEC-C
T ss_pred cCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeeccc-c
Confidence 8776677777788888888888887754 24556777788888877764 2334578888888888875432 2
Q ss_pred ccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCC
Q 036229 294 IHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKL 373 (982)
Q Consensus 294 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 373 (982)
..++|+.|++++|++++. ..+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|++++ +|..+..+++|
T Consensus 224 --~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L 297 (390)
T 3o6n_A 224 --VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMY-HPFVKMQRLERLYISNNRLVA-LNLYGQPIPTL 297 (390)
T ss_dssp --CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEES-GGGTTCSSCCEEECCSSCCCE-EECSSSCCTTC
T ss_pred --ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcCh-hHccccccCCEEECCCCcCcc-cCcccCCCCCC
Confidence 236788888888888753 467777888888888888775433 334467788888888888875 45566778888
Q ss_pred CEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCC
Q 036229 374 SVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDG 438 (982)
Q Consensus 374 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 438 (982)
++|++++|++++ +|..+..+++|+.|++++|.++.++ +..+++|++|++++|+++.
T Consensus 298 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~--------~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 298 KVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--------LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--------CCTTCCCSEEECCSSCEEH
T ss_pred CEEECCCCccee-cCccccccCcCCEEECCCCccceeC--------chhhccCCEEEcCCCCccc
Confidence 888888888885 4556778888888888888887653 5667888899999998764
No 53
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-35 Score=335.50 Aligned_cols=194 Identities=20% Similarity=0.194 Sum_probs=134.6
Q ss_pred cCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEec
Q 036229 497 LQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNF 576 (982)
Q Consensus 497 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L 576 (982)
+++|+.|++++|.+++ +...++|+.|++++|+++.. |.. ..++|+.|++++|+++.++ .+..+++|++|++
T Consensus 185 l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L 255 (390)
T 3o6n_A 185 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDTA-WLLNYPGLVEVDL 255 (390)
T ss_dssp CTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCCG-GGGGCTTCSEEEC
T ss_pred ccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCcccH-HHcCCCCccEEEC
Confidence 3444444444444442 12223455555555555533 221 1245666666666666543 4555666777777
Q ss_pred CCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCC
Q 036229 577 SSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRS 656 (982)
Q Consensus 577 s~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 656 (982)
++|.+++..|..+..+++|+.|++++|++++ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|++++.
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 256 SYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee
Confidence 7777776667777788888888888888876 4666788999999999999998 5677788999999999999999854
Q ss_pred CCcccccccccceeecCCCcccccCCCCCCCCCCCCcccccCcccCCCC
Q 036229 657 IPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 657 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
| +..+++|++|++++|++.+..... .+..+....+.+++..|..+
T Consensus 334 -~--~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 334 -K--LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp -C--CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCTT
T ss_pred -C--chhhccCCEEEcCCCCccchhHHH-HHHHHHhhcccccCceeccc
Confidence 3 678899999999999999865432 34555566678888888765
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-35 Score=354.16 Aligned_cols=194 Identities=20% Similarity=0.195 Sum_probs=138.6
Q ss_pred cCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEec
Q 036229 497 LQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNF 576 (982)
Q Consensus 497 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L 576 (982)
+++|+.|++++|.+++ +...++|+.|++++|.++...+.. .++|+.|+|++|.++.+ ..+..+++|++|++
T Consensus 191 l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~L 261 (597)
T 3oja_B 191 IPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT-AWLLNYPGLVEVDL 261 (597)
T ss_dssp CTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC-GGGGGCTTCSEEEC
T ss_pred hhhhhhhhcccCcccc-----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC-hhhccCCCCCEEEC
Confidence 3444444444444442 122334555555555554322221 14556666666666653 34556667777777
Q ss_pred CCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCC
Q 036229 577 SSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRS 656 (982)
Q Consensus 577 s~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 656 (982)
++|.+++..|..++.+++|+.|+|++|.+++ +|..++.+++|++|+|++|+++ .+|..+..+++|+.|+|++|++++.
T Consensus 262 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 262 SYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp CSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc
Confidence 7777777777778888888888888888877 5677788999999999999998 6788889999999999999999864
Q ss_pred CCcccccccccceeecCCCcccccCCCCCCCCCCCCcccccCcccCCCC
Q 036229 657 IPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 657 ~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
| +..+++|+.|++++|++.|..+.. .+..+....+.+++..|+.+
T Consensus 340 -~--~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 340 -K--LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp -C--CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCCCCCTT
T ss_pred -C--hhhcCCCCEEEeeCCCCCChhHHH-HHHHHhhhccccccccCCcc
Confidence 3 677889999999999999876543 36666777788999999875
No 55
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-36 Score=330.42 Aligned_cols=188 Identities=25% Similarity=0.365 Sum_probs=147.8
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC----eeEEEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE----FKALIL 855 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~lv~ 855 (982)
++|...++||+|+||+||+|++ +|+.||||+++..... ....+.|+..+.+++|||||++++++.+++ ..|+||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 4678889999999999999998 6899999999754322 223345666677899999999999997653 579999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC--------CeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA--------PVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~--------~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
|||++|+|.++++.. .+++..+.+++.|++.||+||| ++ +||||||||+|||++.++.+||+|||+|
T Consensus 81 Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH---~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLH---MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---CCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 999999999999764 4899999999999999999999 55 9999999999999999999999999999
Q ss_pred eeecCCCCce--eecccccccccccCceeeeeee---eeEEeeEeeeeeeee
Q 036229 928 KLLIGEDQSI--TQTQTLATIGYMAPGLFHVKYI---LFVVNFLTSYSFLMI 974 (982)
Q Consensus 928 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~---~~~~~~~d~~~~~~~ 974 (982)
+......... .....+||+.|||||++.+... ...+..+|+||||++
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv 207 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence 9875443322 2234679999999999965421 112234566777643
No 56
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.9e-35 Score=350.25 Aligned_cols=349 Identities=18% Similarity=0.193 Sum_probs=214.4
Q ss_pred cccCCCCCCCCCCc----eeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCc
Q 036229 57 FLAKNWNTSTPVCN----WTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLK 132 (982)
Q Consensus 57 ~~~~~w~~~~~~c~----w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 132 (982)
..+++|.++.+||. |.++.|+.. ++....... .+..-..+.+++.|++++|.+.+..+..+..+++|+
T Consensus 7 ~~l~~~~~~~~C~~~~~~~~c~~~~~~------i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 7 YNVKPRQPEYKCIDSNLQYDCVFYDVH------IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ----CCCSEECCCCC--CCSEEECSCE------ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred ccccCCCCCCcCcccCcCceeEecCce------ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 35688998888885 777766621 111111111 111122467888889988888744444467788899
Q ss_pred EEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecc
Q 036229 133 YVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSIN 212 (982)
Q Consensus 133 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 212 (982)
+|+|++|.+++..|..|+.+++|++|+|++|.+++ +|+..|+++++|++|+|++|.+++..+..|+++++|++|+|++|
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC-CCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 99998888887777788888888888888888884 55555688888888888888888666666788888888888888
Q ss_pred ccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCc
Q 036229 213 NLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPP 292 (982)
Q Consensus 213 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~ 292 (982)
++++..|..|+.+++|++|+|++|.+++.. ++.+++|+.|++++|.+++ +...++|++|++++|.++...+.
T Consensus 158 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~ 229 (597)
T 3oja_B 158 NLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVVRGP 229 (597)
T ss_dssp CCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE-----EECCTTCSEEECCSSCCCEEECS
T ss_pred cCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc-----ccCCchhheeeccCCcccccccc
Confidence 888777777888888888888888777542 3445566666666666553 22334566666666666543322
Q ss_pred cccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCC
Q 036229 293 EIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASK 372 (982)
Q Consensus 293 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 372 (982)
. .++|+.|+|++|.+++ +..+..+++| ++|+|++|.+++..|..+..+++
T Consensus 230 ~---~~~L~~L~L~~n~l~~--~~~l~~l~~L-------------------------~~L~Ls~N~l~~~~~~~~~~l~~ 279 (597)
T 3oja_B 230 V---NVELTILKLQHNNLTD--TAWLLNYPGL-------------------------VEVDLSYNELEKIMYHPFVKMQR 279 (597)
T ss_dssp C---CSCCCEEECCSSCCCC--CGGGGGCTTC-------------------------SEEECCSSCCCEEESGGGTTCSS
T ss_pred c---CCCCCEEECCCCCCCC--ChhhccCCCC-------------------------CEEECCCCccCCCCHHHhcCccC
Confidence 2 1456666666666653 2344444444 55555555555555555555555
Q ss_pred CCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccc
Q 036229 373 LSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSL 452 (982)
Q Consensus 373 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L 452 (982)
|++|+|++|+++++ |..+..+++|+.|++++|.++.++.. +..+++|++|+|++|++.++.. . ..+.|
T Consensus 280 L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~Ls~N~l~~i~~~------~~~l~~L~~L~L~~N~l~~~~~----~-~~~~L 347 (597)
T 3oja_B 280 LERLYISNNRLVAL-NLYGQPIPTLKVLDLSHNHLLHVERN------QPQFDRLENLYLDHNSIVTLKL----S-THHTL 347 (597)
T ss_dssp CCEEECTTSCCCEE-ECSSSCCTTCCEEECCSSCCCCCGGG------HHHHTTCSEEECCSSCCCCCCC----C-TTCCC
T ss_pred CCEEECCCCCCCCC-CcccccCCCCcEEECCCCCCCccCcc------cccCCCCCEEECCCCCCCCcCh----h-hcCCC
Confidence 55555555555543 33344455555555555555543322 3344555566666665554421 1 12356
Q ss_pred cEEeccCCcccc
Q 036229 453 EYFDMSYCNVSG 464 (982)
Q Consensus 453 ~~Ldls~n~l~~ 464 (982)
++|++++|.+.+
T Consensus 348 ~~L~l~~N~~~~ 359 (597)
T 3oja_B 348 KNLTLSHNDWDC 359 (597)
T ss_dssp SEEECCSSCEEH
T ss_pred CEEEeeCCCCCC
Confidence 666666666653
No 57
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.4e-34 Score=318.52 Aligned_cols=306 Identities=25% Similarity=0.384 Sum_probs=224.2
Q ss_pred cCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccc
Q 036229 319 FNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLR 398 (982)
Q Consensus 319 ~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 398 (982)
..+++|+.|++++|.+.... . ...+++|++|++++|++++..+ +..+++|++|++++|.++.. ..|..+++|+
T Consensus 41 ~~l~~L~~L~l~~~~i~~~~-~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~ 113 (347)
T 4fmz_A 41 EELESITKLVVAGEKVASIQ-G--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLR 113 (347)
T ss_dssp HHHTTCSEEECCSSCCCCCT-T--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCS
T ss_pred hhcccccEEEEeCCccccch-h--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCC
Confidence 34556666666666665321 1 3345556666666666554332 55555666666666655543 2355555555
Q ss_pred eecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccce
Q 036229 399 LMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIG 478 (982)
Q Consensus 399 ~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~ 478 (982)
.|++++|.++.++. +..+++|++| ++++|.....++ .+..+++|+.
T Consensus 114 ~L~l~~n~i~~~~~-------~~~l~~L~~L--------------------------~l~~n~~~~~~~-~~~~l~~L~~ 159 (347)
T 4fmz_A 114 ELYLNEDNISDISP-------LANLTKMYSL--------------------------NLGANHNLSDLS-PLSNMTGLNY 159 (347)
T ss_dssp EEECTTSCCCCCGG-------GTTCTTCCEE--------------------------ECTTCTTCCCCG-GGTTCTTCCE
T ss_pred EEECcCCcccCchh-------hccCCceeEE--------------------------ECCCCCCccccc-chhhCCCCcE
Confidence 55555555543321 3444444444 444443333333 3778888999
Q ss_pred EEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcc
Q 036229 479 IYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKL 558 (982)
Q Consensus 479 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 558 (982)
|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|++++|++
T Consensus 160 L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l 233 (347)
T 4fmz_A 160 LTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKI 233 (347)
T ss_dssp EECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred EEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCcc
Confidence 9999999886554 8888999999999999985433 7888999999999999986554 88889999999999999
Q ss_pred cccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCcccccc
Q 036229 559 TSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFG 638 (982)
Q Consensus 559 ~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 638 (982)
+.+|. +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|++|+|++|++++..|..|+
T Consensus 234 ~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 308 (347)
T 4fmz_A 234 TDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIG 308 (347)
T ss_dssp CCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHH
T ss_pred CCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhh
Confidence 98887 77888999999999998864 4688899999999999999875 4688999999999999999999999999
Q ss_pred CCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCccc
Q 036229 639 DLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLK 678 (982)
Q Consensus 639 ~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 678 (982)
++++|+.|+|++|++++..| +..+++|++||+++|+++
T Consensus 309 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 309 GLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999999999999997666 888999999999999985
No 58
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-35 Score=330.18 Aligned_cols=196 Identities=21% Similarity=0.278 Sum_probs=157.3
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCee
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 851 (982)
...++|++.++||+|+||+||+|+.+ +++.||+|++.... ...++.+|+++++.+ +||||+++++++.++++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 35678999999999999999999742 47899999986543 345688999999998 699999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-CcEEEEeecCceee
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAKLL 930 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~ 930 (982)
|+||||+++|+|.+++. .+++.+++.++.|++.||+||| ++|||||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 99999999999999984 3789999999999999999999 9999999999999999876 89999999999865
Q ss_pred cCCCCc--------------------------eeecccccccccccCceeeeee-eeeEEeeEeeeeeeeeecccC--CC
Q 036229 931 IGEDQS--------------------------ITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLMIFIGRG--NY 981 (982)
Q Consensus 931 ~~~~~~--------------------------~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~~l~~~~--~f 981 (982)
.+.... ...+..+||+.|||||++.+.. ++.. .|+|+.|+.++.+.+| ||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~-~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTA-IDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTH-HHHHHHHHHHHHHHHTCSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCc-cchhhhHHHHHHHHHCCCCC
Confidence 332110 1123457999999999997653 4433 3334444445555554 66
Q ss_pred C
Q 036229 982 Y 982 (982)
Q Consensus 982 ~ 982 (982)
|
T Consensus 248 ~ 248 (361)
T 4f9c_A 248 Y 248 (361)
T ss_dssp S
T ss_pred C
Confidence 4
No 59
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.9e-35 Score=343.17 Aligned_cols=194 Identities=25% Similarity=0.327 Sum_probs=158.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHH---HHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDV---ECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~---E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||+||+|+.. +|+.||||++++.. ......+.+ ++++++.++|||||++++++++++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999864 59999999997532 122223333 45667788999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
|+|||||+||+|.+++.+.+ .+++..++.|+.||+.||+||| ++|||||||||+|||++.+|++||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 5899999999999999999999 9999999999999999999999999999999764
Q ss_pred CCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeeeeeec--ccCCC
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLMIFI--GRGNY 981 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~~l~--~~~~f 981 (982)
.. .....+||+.|||||++.+ ..|+.. .|||++|+.+|.| |..||
T Consensus 344 ~~----~~~t~~GTp~YmAPEvl~~~~~y~~~-vDiWSLGvilYEmLtG~~PF 391 (689)
T 3v5w_A 344 KK----KPHASVGTHGYMAPEVLQKGVAYDSS-ADWFSLGCMLFKLLRGHSPF 391 (689)
T ss_dssp SC----CCCSCCSCGGGCCHHHHSTTCCCCTH-HHHHHHHHHHHHHHHSSCTT
T ss_pred CC----CCCCccCCcCccCHHHHhCCCCCCcH-HHHHHHHHHHHHHHhCCCCC
Confidence 32 2345789999999999964 456654 3344555554444 44455
No 60
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=331.15 Aligned_cols=195 Identities=27% Similarity=0.299 Sum_probs=155.9
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecC------CC
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCST------EE 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~ 849 (982)
.++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+++.+|+++|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 36799999999999999999986 469999999996542 2345678899999999999999999998753 36
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..|+|||||+ |+|.+++.+. ..+++.++..+++||+.||+||| ++|||||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 6899998764 46899999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCC--CceeecccccccccccCceeeeee-eeeEEeeEeeeeeeeeecccC
Q 036229 930 LIGED--QSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 930 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~~l~~~~ 979 (982)
+.... ........+||+.|||||++.+.. ++.. .|+|++|+.++.+.+|
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~-~DiWSlG~il~ell~G 259 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA-IDLWSVGCIFGEMLAR 259 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTH-HHHHHHHHHHHHHHHT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCCh-hheehhHHHHHHHHHC
Confidence 64322 122335678999999999987653 3433 3333444444444443
No 61
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=6.5e-33 Score=310.83 Aligned_cols=306 Identities=28% Similarity=0.420 Sum_probs=171.0
Q ss_pred hccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCcc
Q 036229 271 ANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLE 350 (982)
Q Consensus 271 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 350 (982)
..+++|++|++++|.++.. | .+..+++|++|++++|++++..+ +..+++|+.|++++|.+... + .+..+++|+
T Consensus 41 ~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~--~~~~l~~L~ 113 (347)
T 4fmz_A 41 EELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-S--ALQNLTNLR 113 (347)
T ss_dssp HHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G--GGTTCTTCS
T ss_pred hhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-h--HHcCCCcCC
Confidence 3445555555555555432 2 24455555555555555543222 44444444444444443321 0 122344445
Q ss_pred EEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEE
Q 036229 351 ELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIG 430 (982)
Q Consensus 351 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~ 430 (982)
+|++++|++++..+ +..+++|++|++++|......+ .+ ..+++|++|+
T Consensus 114 ~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~-----------------------------~~l~~L~~L~ 161 (347)
T 4fmz_A 114 ELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PL-----------------------------SNMTGLNYLT 161 (347)
T ss_dssp EEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GG-----------------------------TTCTTCCEEE
T ss_pred EEECcCCcccCchh--hccCCceeEEECCCCCCccccc-ch-----------------------------hhCCCCcEEE
Confidence 55555555553322 4555555555555554332221 13 3344444555
Q ss_pred ccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCC
Q 036229 431 LSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKL 510 (982)
Q Consensus 431 Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 510 (982)
+++|.+.++. + +..+++|+.|++++|++++..+ +..+++|+.|++++|++
T Consensus 162 l~~~~~~~~~--------------------------~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l 211 (347)
T 4fmz_A 162 VTESKVKDVT--------------------------P--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQI 211 (347)
T ss_dssp CCSSCCCCCG--------------------------G--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCC
T ss_pred ecCCCcCCch--------------------------h--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCC
Confidence 5555433221 1 3344455555555555543322 45555555555555555
Q ss_pred CCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccc
Q 036229 511 EGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIG 590 (982)
Q Consensus 511 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 590 (982)
++..+ +..+++|++|++++|++++..+ +..+++|++|++++|+++.++ .+..+++|++|++++|++++. ..+.
T Consensus 212 ~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~ 284 (347)
T 4fmz_A 212 TDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI--SVLN 284 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC--GGGG
T ss_pred CCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC--hhhc
Confidence 54322 5555556666666665554332 555666666666666666553 345566666666666666654 3467
Q ss_pred cccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCC
Q 036229 591 NLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLS 654 (982)
Q Consensus 591 ~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 654 (982)
.+++|+.|++++|++++..|..++.+++|++|+|++|++++..| +..+++|++|++++|+|+
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 285 NLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 77888888888888888888888899999999999999987666 888899999999999885
No 62
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4.2e-34 Score=338.25 Aligned_cols=185 Identities=21% Similarity=0.299 Sum_probs=162.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.++|++.+.||+|+||+||+|+.. +|+.||+|++........+.+.+|+++|+.++||||+++++++++++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999864 6999999999876666677899999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC--CcEEEEeecCceeecCCCC
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN--MVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~~~ 935 (982)
|+||+|.+++......+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999999876667999999999999999999999 9999999999999999854 89999999999987432
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
......+||+.|||||++.+..|+.. +|+||+|
T Consensus 311 -~~~~~~~GT~~y~APEv~~~~~y~~~---~DiWSlG 343 (573)
T 3uto_A 311 -QSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVG 343 (573)
T ss_dssp -SEEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHH
T ss_pred -CceeeeEECccccCHHHhCCCCCCcH---HHHHHHH
Confidence 23345689999999999988877655 3445555
No 63
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=6.4e-36 Score=349.20 Aligned_cols=262 Identities=20% Similarity=0.195 Sum_probs=148.0
Q ss_pred CCCCEEEcCCCCccccCcc-hhhhccCCcEEEccCCcccC----ccCccccCcCCCCccccccCcccccCchhhhcCCC-
Q 036229 105 SSLQSLNLGFNRLSGSIPS-AIFTLYTLKYVNFRGNQLSG----AFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLP- 178 (982)
Q Consensus 105 ~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~- 178 (982)
++|++|||++|+++..... .+..+++|++|+|++|++++ .++..+..+++|++|||++|.+++..+..++..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3567777777777643333 36677888888888888764 35666777788888888888877555555656666
Q ss_pred ---CCCeeeecceeeec----ccCCCccCcCcccEEEeecccccccccccccc-----ccchhhhhccCCCCCCch----
Q 036229 179 ---FLESISLSQNMFHG----RIPSALSNCKYLEILSLSINNLLGAIPKEIGN-----LTKLKELYLGYSGLQGEI---- 242 (982)
Q Consensus 179 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~---- 242 (982)
+|++|+|++|+++. .++..|..+++|++|+|++|++++..+..+.. .++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 68888888888773 45777778888888888888876544443332 345666666666666432
Q ss_pred hhhcCCCcccceEeccccccCCcCChhhhc-----cCCCcEEEccCCccccC----CCccccccCCCcEEEccCcccccc
Q 036229 243 PREFGNLAELELMALQVSNLQGEIPQELAN-----LTGLEVLKLGKNFLTGE----IPPEIHNLHNLKLLDLSHNKLVGA 313 (982)
Q Consensus 243 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 313 (982)
+..+..+++|+.|++++|.+.+..+..+.. .++|++|++++|.+++. ++..+..+++|++|+|++|++++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 333344444455555544444332222221 33444444444444432 233333444444444444444321
Q ss_pred CcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCccccc----ccccccCCCCCCEEEeccccCccc
Q 036229 314 VPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGT----IPRFIFNASKLSVLELGRNSFSGF 386 (982)
Q Consensus 314 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~i~~~ 386 (982)
....+. ......+++|++|++++|++++. ++..+..+++|++|++++|.+++.
T Consensus 243 ~~~~l~--------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 243 GMAELC--------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHH--------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHH--------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 110000 01111244556666666666543 344555566666666666666543
No 64
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-32 Score=303.01 Aligned_cols=242 Identities=25% Similarity=0.293 Sum_probs=203.9
Q ss_pred EEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccC
Q 036229 84 KVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYN 163 (982)
Q Consensus 84 ~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 163 (982)
+.+++++++++ .+|..+. ++|+.|+|++|.+++..|.++.++++|++|+|++|++++..|..++++++|++|+|++|
T Consensus 36 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 36 RVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred CEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 34566677776 6777664 68999999999999777788999999999999999999888999999999999999999
Q ss_pred cccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccc--cccccccccccchhhhhccCCCCCCc
Q 036229 164 ALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLL--GAIPKEIGNLTKLKELYLGYSGLQGE 241 (982)
Q Consensus 164 ~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~ 241 (982)
.++ .+|..++ ++|++|++++|++++..+..|.++++|++|++++|+++ +..|..+..+ +|++|++++|++++
T Consensus 113 ~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~- 186 (332)
T 2ft3_A 113 HLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG- 186 (332)
T ss_dssp CCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-
T ss_pred cCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-
Confidence 998 8888774 89999999999999877778999999999999999996 3667788888 99999999999986
Q ss_pred hhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCC
Q 036229 242 IPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNM 321 (982)
Q Consensus 242 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 321 (982)
+|..+. ++|+.|++++|.+++..+..+.++++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+
T Consensus 187 l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l 263 (332)
T 2ft3_A 187 IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDL 263 (332)
T ss_dssp CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGC
T ss_pred cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcC
Confidence 555443 68888888888888887788888888888888888888877778888888888888888887 667777777
Q ss_pred CCCceeecCCCcCCCC
Q 036229 322 STLTGLGLQSNSLSGS 337 (982)
Q Consensus 322 ~~L~~L~L~~N~l~~~ 337 (982)
++|+.|++++|++++.
T Consensus 264 ~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 264 KLLQVVYLHTNNITKV 279 (332)
T ss_dssp TTCCEEECCSSCCCBC
T ss_pred ccCCEEECCCCCCCcc
Confidence 7777777776666543
No 65
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.1e-32 Score=302.86 Aligned_cols=240 Identities=22% Similarity=0.266 Sum_probs=180.9
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCc
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNA 164 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 164 (982)
.+++++++++ .+|..+. +.|+.|+|++|++++..+..+.++++|++|+|++|++++..|..++++++|++|++++|.
T Consensus 35 ~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 111 (330)
T 1xku_A 35 VVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ 111 (330)
T ss_dssp EEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc
Confidence 3455566666 5666554 688999999999987777789999999999999999998889999999999999999999
Q ss_pred ccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccc--ccccccccccchhhhhccCCCCCCch
Q 036229 165 LSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLG--AIPKEIGNLTKLKELYLGYSGLQGEI 242 (982)
Q Consensus 165 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~ 242 (982)
++ .+|..++ ++|++|++++|++++..+..|.++++|++|++++|++.. ..+..+..+++|++|++++|+++. +
T Consensus 112 l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l 186 (330)
T 1xku_A 112 LK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-I 186 (330)
T ss_dssp CS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-C
T ss_pred CC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-C
Confidence 98 7887763 789999999999988777788889999999999998853 567778888888888888888874 4
Q ss_pred hhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCC
Q 036229 243 PREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMS 322 (982)
Q Consensus 243 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 322 (982)
|..+. ++|+.|++++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..++
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCC
Confidence 44332 56777777777776666666777777777777777776666666666677777777777666 4555555555
Q ss_pred CCceeecCCCcCC
Q 036229 323 TLTGLGLQSNSLS 335 (982)
Q Consensus 323 ~L~~L~L~~N~l~ 335 (982)
+|+.|++++|+++
T Consensus 264 ~L~~L~l~~N~i~ 276 (330)
T 1xku_A 264 YIQVVYLHNNNIS 276 (330)
T ss_dssp SCCEEECCSSCCC
T ss_pred CcCEEECCCCcCC
Confidence 5544444444443
No 66
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.5e-31 Score=297.58 Aligned_cols=268 Identities=24% Similarity=0.279 Sum_probs=144.5
Q ss_pred CCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccc
Q 036229 347 PNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSL 426 (982)
Q Consensus 347 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 426 (982)
++|++|++++|++++..|..+.++++|++|++++|++++..|..|..+++|+.|++++|.++.++..
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~------------- 120 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPN------------- 120 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSS-------------
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcc-------------
Confidence 3456666666666655566666666677777777766666666666555555554444444433221
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCC--CCCCccccCcCCCCeEE
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLN--GSIPITLGKLQKLQGLH 504 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ 504 (982)
.. .+|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+ +|+.|+
T Consensus 121 ----------------~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 121 ----------------LP-----SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp ----------------CC-----TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCB
T ss_pred ----------------cc-----ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEE
Confidence 10 23333444444444444444555666666666666664 2445555555 566666
Q ss_pred eeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCC
Q 036229 505 LEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGP 584 (982)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~ 584 (982)
+++|++++ +|..+. ++|++|++++|++++..|..|.++++|++|+|++|+++.++
T Consensus 179 l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~---------------------- 233 (332)
T 2ft3_A 179 ISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIE---------------------- 233 (332)
T ss_dssp CCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCC----------------------
T ss_pred CcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCC----------------------
Confidence 66666553 333332 45555555555555555555555555555555555555443
Q ss_pred CccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCC------CCCCeeeCCCCcCC--CC
Q 036229 585 LPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDL------ISLKSLNLSNNNLS--RS 656 (982)
Q Consensus 585 ~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~ 656 (982)
+..+..+++|+.|++++|+++ .+|..++.+++|++|+|++|+|++..+..|... .+|+.|++++|.+. +.
T Consensus 234 -~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~ 311 (332)
T 2ft3_A 234 -NGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEV 311 (332)
T ss_dssp -TTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGS
T ss_pred -hhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccccc
Confidence 334444455555555555554 344455555566666666666655555555442 45666666666665 45
Q ss_pred CCcccccccccceeecCCCc
Q 036229 657 IPISLEKLSYLEDLDLSFNK 676 (982)
Q Consensus 657 ~p~~l~~l~~L~~l~ls~N~ 676 (982)
.|..|..+++|+.+++++|.
T Consensus 312 ~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 312 QPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CGGGGTTBCCSTTEEC----
T ss_pred Ccccccccchhhhhhccccc
Confidence 55566666666666666653
No 67
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=3.2e-31 Score=294.75 Aligned_cols=269 Identities=22% Similarity=0.256 Sum_probs=161.6
Q ss_pred CCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccc
Q 036229 347 PNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSL 426 (982)
Q Consensus 347 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 426 (982)
+++++|++++|++++..+..|.++++|++|++++|++++..|..|..+++|+.|++++|.++.++... .++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~--------~~~- 122 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--------PKT- 122 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--------CTT-
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhh--------ccc-
Confidence 34577777777777666667777777788888777777776777777776666666666555433221 023
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCC--CCCccccCcCCCCeEE
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNG--SIPITLGKLQKLQGLH 504 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ 504 (982)
|++|++++|++++..+..|.++++|+.|++++|.++. ..+..|.++++|++|+
T Consensus 123 -------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~ 177 (330)
T 1xku_A 123 -------------------------LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIR 177 (330)
T ss_dssp -------------------------CCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEE
T ss_pred -------------------------ccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEE
Confidence 4444444445554455556667777777777777743 5566667777777777
Q ss_pred eeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCC
Q 036229 505 LEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGP 584 (982)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~ 584 (982)
+++|+++. +|..+. ++|++|++++|++++..|..|.++++|++|+|++|+++.++.
T Consensus 178 l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--------------------- 233 (330)
T 1xku_A 178 IADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDN--------------------- 233 (330)
T ss_dssp CCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECT---------------------
T ss_pred CCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeCh---------------------
Confidence 77777763 444332 566777777777766666666666666666666666665443
Q ss_pred CccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCC------CCCCeeeCCCCcCCC--C
Q 036229 585 LPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDL------ISLKSLNLSNNNLSR--S 656 (982)
Q Consensus 585 ~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~~--~ 656 (982)
..+..+++|+.|++++|+++ .+|..+..+++|++|+|++|+|++..+..|... ++|+.|++++|.+.. .
T Consensus 234 --~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i 310 (330)
T 1xku_A 234 --GSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI 310 (330)
T ss_dssp --TTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGS
T ss_pred --hhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccccccc
Confidence 23334444444555555554 344455555566666666666655555555432 566677777776642 4
Q ss_pred CCcccccccccceeecCCCc
Q 036229 657 IPISLEKLSYLEDLDLSFNK 676 (982)
Q Consensus 657 ~p~~l~~l~~L~~l~ls~N~ 676 (982)
.|..|..++.++.++|++|+
T Consensus 311 ~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 311 QPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CGGGGTTCCCGGGEEC----
T ss_pred CccccccccceeEEEecccC
Confidence 45666667777777777764
No 68
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.5e-34 Score=337.55 Aligned_cols=110 Identities=20% Similarity=0.190 Sum_probs=54.3
Q ss_pred CCCCeeeecceeeecccCCC-ccCcCcccEEEeecccccc----ccccccccccchhhhhccCCCCCCchhhhc-CCCc-
Q 036229 178 PFLESISLSQNMFHGRIPSA-LSNCKYLEILSLSINNLLG----AIPKEIGNLTKLKELYLGYSGLQGEIPREF-GNLA- 250 (982)
Q Consensus 178 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 250 (982)
++|++|+|++|+++...... +..+++|++|+|++|+++. .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 45666666666665433322 4556666666666666553 234444555555666666555554333222 1222
Q ss_pred ---ccceEeccccccCC----cCChhhhccCCCcEEEccCCccc
Q 036229 251 ---ELELMALQVSNLQG----EIPQELANLTGLEVLKLGKNFLT 287 (982)
Q Consensus 251 ---~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 287 (982)
+|+.|++++|+++. .+|..+..+++|++|+|++|.++
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 126 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 126 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCc
Confidence 34444554444442 22444444444444444444444
No 69
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.97 E-value=5.8e-33 Score=318.02 Aligned_cols=180 Identities=19% Similarity=0.306 Sum_probs=156.6
Q ss_pred HHHHHHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecC
Q 036229 772 YLELCRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCST 847 (982)
Q Consensus 772 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 847 (982)
+.++....++|++.+.||+|+||+||+|+.. +++.||+|+++.. .......+.+|+.+++.++||||+++++++.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444556789999999999999999999965 4899999999753 22334558899999999999999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
++..|+||||+++|+|.+++.+....+++..+..++.|++.||+||| ++|||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876667999999999999999999999 999999999999999999999999999999
Q ss_pred eeecCCCCceeecccccccccccCceee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFH 955 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 955 (982)
+...... .......+||+.|||||++.
T Consensus 223 ~~~~~~~-~~~~~~~~GT~~Y~APE~l~ 249 (437)
T 4aw2_A 223 LKLMEDG-TVQSSVAVGTPDYISPEILQ 249 (437)
T ss_dssp EECCTTS-CEECCSCCSCGGGCCHHHHH
T ss_pred hhcccCC-CcccccccCCcCeeChHHHh
Confidence 8764332 22334568999999999986
No 70
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.7e-31 Score=299.87 Aligned_cols=285 Identities=22% Similarity=0.237 Sum_probs=222.3
Q ss_pred CCCCCCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcc
Q 036229 62 WNTSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQL 141 (982)
Q Consensus 62 w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l 141 (982)
|.....+|.|.|+ |+. ++++++ .+|..+. ++|++|++++|++++..+..+..+++|++|+|++|++
T Consensus 23 ~~~~~~~C~~~~~-c~~----------~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 88 (353)
T 2z80_A 23 SNQASLSCDRNGI-CKG----------SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGI 88 (353)
T ss_dssp ----CCEECTTSE-EEC----------CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCccCCCCCCCeE-eeC----------CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCcc
Confidence 4444557999988 873 456666 6777665 5899999999999966666899999999999999999
Q ss_pred cCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccC-CCccCcCcccEEEeecc-ccccccc
Q 036229 142 SGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIP-SALSNCKYLEILSLSIN-NLLGAIP 219 (982)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N-~l~~~~p 219 (982)
++..|..|.++++|++|||++|.++ .+|...|.++++|++|+|++|++++..+ ..|.++++|++|++++| .++...+
T Consensus 89 ~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 89 NTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred CccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 9888888999999999999999998 6888877999999999999999996544 48999999999999999 4776667
Q ss_pred cccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcccc---c
Q 036229 220 KEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIH---N 296 (982)
Q Consensus 220 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~---~ 296 (982)
..|.++++|++|++++|++++..|..+..+++|+.|++++|++....+..+..+++|++|++++|++++..+..+. .
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~ 247 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGET 247 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------C
T ss_pred HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccc
Confidence 8899999999999999999988899999999999999999998754444566789999999999999976655443 3
Q ss_pred cCCCcEEEccCccccc----cCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCC
Q 036229 297 LHNLKLLDLSHNKLVG----AVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASK 372 (982)
Q Consensus 297 l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 372 (982)
.+.++.++|++|.+++ .+|..+..+++| ++|++++|+++...+..|..+++
T Consensus 248 ~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L-------------------------~~L~Ls~N~l~~i~~~~~~~l~~ 302 (353)
T 2z80_A 248 NSLIKKFTFRNVKITDESLFQVMKLLNQISGL-------------------------LELEFSRNQLKSVPDGIFDRLTS 302 (353)
T ss_dssp CCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC-------------------------CEEECCSSCCCCCCTTTTTTCTT
T ss_pred cchhhccccccccccCcchhhhHHHHhcccCC-------------------------CEEECCCCCCCccCHHHHhcCCC
Confidence 4567777777777764 245555555555 55555666555332233456666
Q ss_pred CCEEEeccccCccc
Q 036229 373 LSVLELGRNSFSGF 386 (982)
Q Consensus 373 L~~L~L~~N~i~~~ 386 (982)
|++|++++|++.+.
T Consensus 303 L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 303 LQKIWLHTNPWDCS 316 (353)
T ss_dssp CCEEECCSSCBCCC
T ss_pred CCEEEeeCCCccCc
Confidence 77777777766643
No 71
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.2e-31 Score=291.42 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=194.0
Q ss_pred CceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcc-hhhhccCCcEEEccCCcccC--cc
Q 036229 69 CNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPS-AIFTLYTLKYVNFRGNQLSG--AF 145 (982)
Q Consensus 69 c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~--~~ 145 (982)
|.|.+|.|+ +++++ .+|..+. ++|++|+|++|+++ .+|. .+..+++|++|+|++|+++. ..
T Consensus 7 C~~~~l~c~------------~~~l~-~ip~~~~--~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 7 CSGTEIRCN------------SKGLT-SVPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EETTEEECC------------SSCCS-SCCSCCC--TTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eCCCEEEcC------------CCCcc-cCCCCCC--CCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCc
Confidence 788888887 23344 4555443 57888888888887 4554 46788888888888888873 34
Q ss_pred CccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccC-CCccCcCcccEEEeecccccccccccccc
Q 036229 146 PSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIP-SALSNCKYLEILSLSINNLLGAIPKEIGN 224 (982)
Q Consensus 146 p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 224 (982)
|..+..+++|++|+|++|.++ .+|..+ ..+++|++|++++|++++..+ ..+..+++|++|++++|++++..|..+..
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNF-LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEE-ETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred ccccccccccCEEECCCCccc-cChhhc-CCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 667777888888888888887 577665 778888888888888887655 57888888888888888888777778888
Q ss_pred ccchhhhhccCCCCCC-chhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEE
Q 036229 225 LTKLKELYLGYSGLQG-EIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLL 303 (982)
Q Consensus 225 l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 303 (982)
+++|++|++++|++++ ..|..+..+++|+.|++++|++++..|..+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 228 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 228 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEe
Confidence 8888888888888876 567778888888888888888887777788888888888888888887777778888888888
Q ss_pred EccCccccccCcccccCCC-CCceeecCCCcCCC
Q 036229 304 DLSHNKLVGAVPATIFNMS-TLTGLGLQSNSLSG 336 (982)
Q Consensus 304 ~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~ 336 (982)
||++|++++..|..+..++ +|+.|+|++|++.+
T Consensus 229 ~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 229 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp ECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred ECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 8888888877777777663 66666666666554
No 72
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=2.3e-33 Score=338.57 Aligned_cols=256 Identities=18% Similarity=0.130 Sum_probs=156.5
Q ss_pred CCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCc---cccCcchhh------------hccCCc
Q 036229 68 VCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRL---SGSIPSAIF------------TLYTLK 132 (982)
Q Consensus 68 ~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~---~~~~p~~~~------------~l~~L~ 132 (982)
|++|.++.+. ..+ .+.+.. .....++..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~--~~~--~l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSE--TRE--HVTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHH--HCC--EEEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhc--ccc--EEEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 5589888544 122 222322 23333444566788899999987532 133443222 778888
Q ss_pred EEEccCCcccCccCccccCc--CCCCccccccCc-ccccCchhhhcCCCCCCeeeecceeeecc----cCCCccCcCccc
Q 036229 133 YVNFRGNQLSGAFPSFIFNK--SSLQHLDFSYNA-LSGEIPANICSNLPFLESISLSQNMFHGR----IPSALSNCKYLE 205 (982)
Q Consensus 133 ~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~ 205 (982)
+|+|++|.+++..+..+... ++|++|+|++|. ++...-..+..++++|++|+|++|.+++. ++..+..+++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 88888888877766666663 348888888876 22111123335778888888888887655 223345677788
Q ss_pred EEEeeccccc----cccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccC---CcCChhhhccCCCcE
Q 036229 206 ILSLSINNLL----GAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQ---GEIPQELANLTGLEV 278 (982)
Q Consensus 206 ~L~Ls~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~p~~l~~l~~L~~ 278 (982)
+|++++|+++ +.++..+.++++|++|++++|.+.+ +|..+.++++|+.|+++..... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 8888888776 2344455666777777777777764 5566777777777777643322 223344566666777
Q ss_pred EEccCCccccCCCccccccCCCcEEEccCccccccCc-ccccCCCCCceeecC
Q 036229 279 LKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVP-ATIFNMSTLTGLGLQ 330 (982)
Q Consensus 279 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~ 330 (982)
|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++
T Consensus 275 L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 275 LGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp EEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 776665332 455566666677777777766543332 224555666665555
No 73
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.97 E-value=5.8e-31 Score=287.76 Aligned_cols=186 Identities=26% Similarity=0.367 Sum_probs=161.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 356899999999999999999985 5689999999987666666788999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
|+++|+|.+++... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|........
T Consensus 98 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 99999999999765 4889999999999999999999 99999999999999999999999999999987643322
Q ss_pred eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..++.. +|+|++|+
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 204 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPK---VDIWSLGI 204 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTH---HHHHHHHH
T ss_pred -ccCCccCCcCccChhhhcCCCCCcH---HHHHHHHH
Confidence 3345679999999999987766543 45566663
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.97 E-value=4.3e-31 Score=293.12 Aligned_cols=185 Identities=24% Similarity=0.319 Sum_probs=158.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.. .......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467999999999999999999865 5999999999754 233456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 99999999999987643 5889999999999999999999 999999999999999999999999999999864222
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.......+||+.|+|||++.+..++.. +|+|++|
T Consensus 159 -~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 192 (337)
T 1o6l_A 159 -GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLG 192 (337)
T ss_dssp -TCCBCCCEECGGGCCGGGGSSSCBCTT---HHHHHHH
T ss_pred -CCcccccccChhhCChhhhcCCCCCch---hhcccch
Confidence 223345789999999999987766644 3445555
No 75
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.97 E-value=2.1e-31 Score=294.86 Aligned_cols=186 Identities=26% Similarity=0.346 Sum_probs=159.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
..++|++.+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++++.++||||+++++++..++..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 357899999999999999999986 57999999999754 234456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++...+ .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999999997654 4899999999999999999999 999999999999999999999999999999865322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
......+||+.|+|||++.+..+... .+|+|++|
T Consensus 168 --~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG 201 (328)
T 3fe3_A 168 --GKLDAFCGAPPYAAPELFQGKKYDGP--EVDVWSLG 201 (328)
T ss_dssp --CGGGTTSSSGGGCCHHHHHTCCCCSH--HHHHHHHH
T ss_pred --CccccccCCcceeCcccccCCCcCCc--hhhhhhhH
Confidence 22345789999999999977655422 24455555
No 76
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.9e-31 Score=301.77 Aligned_cols=180 Identities=21% Similarity=0.326 Sum_probs=156.6
Q ss_pred HHHHHHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecC
Q 036229 772 YLELCRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCST 847 (982)
Q Consensus 772 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 847 (982)
+.+.....++|++.+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|+++++.++||||+++++++++
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455788999999999999999999964 6999999999753 22344668899999999999999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
++..|+||||+++|+|.+++.+.+..+++..+..++.||+.||+||| ++|||||||||+||+++.++.+||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876667899999999999999999999 999999999999999999999999999999
Q ss_pred eeecCCCCceeecccccccccccCceee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFH 955 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 955 (982)
+...... .......+||+.|+|||++.
T Consensus 210 ~~~~~~~-~~~~~~~~Gt~~Y~APE~l~ 236 (412)
T 2vd5_A 210 LKLRADG-TVRSLVAVGTPDYLSPEILQ 236 (412)
T ss_dssp EECCTTS-CEECSSCCSCGGGCCHHHHH
T ss_pred eeccCCC-ccccceeccccCcCCHHHHh
Confidence 8764332 22234568999999999996
No 77
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.97 E-value=2.7e-31 Score=301.79 Aligned_cols=179 Identities=23% Similarity=0.320 Sum_probs=154.3
Q ss_pred HHHHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCC
Q 036229 774 ELCRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE 849 (982)
Q Consensus 774 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 849 (982)
++....++|++.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|+.+++.++||||+++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445688999999999999999999865 5899999999753 2233456889999999999999999999999999
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..|+||||++||+|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999999754 4789999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCCCceeecccccccccccCceeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKY 958 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 958 (982)
..... .......+||+.|+|||++.+..
T Consensus 218 ~~~~~-~~~~~~~~gt~~Y~APE~l~~~~ 245 (410)
T 3v8s_A 218 MNKEG-MVRCDTAVGTPDYISPEVLKSQG 245 (410)
T ss_dssp CCTTS-EEECCSCCSCGGGCCHHHHHTTT
T ss_pred eccCC-cccccCCcCCccccCHHHhhccC
Confidence 64322 22334678999999999996543
No 78
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.97 E-value=6.8e-31 Score=289.37 Aligned_cols=190 Identities=24% Similarity=0.390 Sum_probs=162.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.++|...+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 467899999999999999999864 5899999998766666778899999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887777999999999999999999999 9999999999999999999999999999998764322111
Q ss_pred ------------eecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 938 ------------TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 938 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
......||+.|+|||++.+..++.. +|+|++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~ 211 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK---VDVFSFGIV 211 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTH---HHHHHHHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcH---HHHHHHHHH
Confidence 1124579999999999987666543 556666643
No 79
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.97 E-value=1.8e-31 Score=295.47 Aligned_cols=198 Identities=35% Similarity=0.565 Sum_probs=168.4
Q ss_pred CCHHHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC
Q 036229 770 FSYLELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE 849 (982)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 849 (982)
+++.++...+++|+..+.||+|+||.||+|+..+++.||+|++........+.+.+|+++++.++||||+++++++..++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444556788999999999999999999998889999999988766666788999999999999999999999999999
Q ss_pred eeEEEEEeccCCChHHHHhcCC---CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 036229 850 FKALILEYMPHGSLEKSLYSSN---YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 926 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGl 926 (982)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999987543 35889999999999999999999 99999999999999999999999999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
++...............||+.|+|||++.+..++.. +|+|++|+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 229 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEK---SDVYSFGV 229 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTH---HHHHHHHH
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcc---cchHhHHH
Confidence 987543333333345668999999999977665543 55666664
No 80
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.96 E-value=4.1e-31 Score=295.30 Aligned_cols=194 Identities=24% Similarity=0.288 Sum_probs=155.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+++..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999864 5899999999754 233456678899999988 7999999999999999999
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999997654 4899999999999999999999 99999999999999999999999999999985422
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeeccc
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGR 978 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~ 978 (982)
........+||+.|+|||++.+..++.. .++|++|+.++.+.+
T Consensus 177 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~ 219 (353)
T 3txo_A 177 --NGVTTATFCGTPDYIAPEILQEMLYGPA-VDWWAMGVLLYEMLC 219 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTH-HHHHHHHHHHHHHHH
T ss_pred --CCccccccCCCcCeEChhhcCCCCcCCc-cCCCcchHHHHHHHh
Confidence 2223445789999999999987766654 223344444444433
No 81
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.96 E-value=2e-30 Score=286.69 Aligned_cols=196 Identities=24% Similarity=0.290 Sum_probs=166.8
Q ss_pred ccCCHHHHHHHhcC----------CCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCc
Q 036229 768 RRFSYLELCRATNR----------FSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHR 836 (982)
Q Consensus 768 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 836 (982)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677887777654 677789999999999999975 6999999999876666677889999999999999
Q ss_pred cceeEEeeecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC
Q 036229 837 NLIKVISSCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN 916 (982)
Q Consensus 837 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 916 (982)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998643 4899999999999999999999 9999999999999999999
Q ss_pred CcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 917 MVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 917 ~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+.+||+|||++....... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 178 ~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~---~Dv~slG~ 229 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAPEVISRSLYATE---VDIWSLGI 229 (321)
T ss_dssp CCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTH---HHHHHHHH
T ss_pred CcEEEeeeeeeeecccCc--cccccccCCccccCHhhhcCCCCCch---hhHHHHHH
Confidence 999999999998764322 22345679999999999977655543 55666663
No 82
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.96 E-value=5.7e-31 Score=293.00 Aligned_cols=189 Identities=26% Similarity=0.386 Sum_probs=151.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999985 569999999997543 234567899999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++|+|.+++...+ .+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+|.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999997654 4899999999999999999999 9999999999999999999999999999998653322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......+||+.|+|||++.+..+... .+|+|++|+
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwSlG~ 198 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGS--EADVWSMGI 198 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CC--HHHHHHHHH
T ss_pred CccccccCCccCccCHHHHcCCCCCCc--HhHHHHHHH
Confidence 222345679999999999977654222 245555553
No 83
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.96 E-value=6.6e-31 Score=296.92 Aligned_cols=193 Identities=24% Similarity=0.283 Sum_probs=159.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||+||+|+.. +++.||+|+++.. .....+.+.+|..+++++ +||||+++++++.+++..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 468999999999999999999865 5899999999754 233445688899999887 89999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 131 V~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999999987644 5899999999999999999999 999999999999999999999999999999863222
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeeccc
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGR 978 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~ 978 (982)
.......+||+.|+|||++.+..++... ++|++|+.++.+.+
T Consensus 207 --~~~~~~~~gt~~Y~aPE~l~~~~~~~~~-DiwslGvllyell~ 248 (396)
T 4dc2_A 207 --GDTTSTFCGTPNYIAPEILRGEDYGFSV-DWWALGVLMFEMMA 248 (396)
T ss_dssp --TCCBCCCCBCGGGCCHHHHTTCCBCTHH-HHHHHHHHHHHHHH
T ss_pred --CCccccccCCcccCCchhhcCCCCChHH-HHHHHHHHHHHHHh
Confidence 2234567899999999999887776542 33344444443333
No 84
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.96 E-value=1e-30 Score=294.46 Aligned_cols=171 Identities=27% Similarity=0.400 Sum_probs=151.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 467999999999999999999864 58999999997542 33456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.+...
T Consensus 94 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE- 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT-
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC-
Confidence 9999999999999764 45899999999999999999999 999999999999999999999999999999976332
Q ss_pred CceeecccccccccccCceeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
......+||+.|+|||++.+
T Consensus 169 --~~~~~~~gt~~Y~aPE~~~~ 188 (384)
T 4fr4_A 169 --TQITTMAGTKPYMAPEMFSS 188 (384)
T ss_dssp --CCBCCCCSCGGGCCGGGTCC
T ss_pred --CceeccCCCccccCCeeecc
Confidence 23345789999999999964
No 85
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=8.7e-31 Score=290.78 Aligned_cols=202 Identities=35% Similarity=0.523 Sum_probs=171.1
Q ss_pred cccccCCHHHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccc-hhhhhHHHHHHHhhhcCCccceeEEe
Q 036229 765 ATCRRFSYLELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCG-RAFKSFDVECEMMKSIRHRNLIKVIS 843 (982)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~ 843 (982)
.....+++.++....++|+..+.||+|+||.||+|+..+++.||||++..... .....+.+|+++++.++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 34567899999999999999999999999999999987899999999875432 23347899999999999999999999
Q ss_pred eecCCCeeEEEEEeccCCChHHHHhcCC---CcCCHHHHHHHHHHHHHHHHHHHccCCC---CeEEcCCCCCCEEEcCCC
Q 036229 844 SCSTEEFKALILEYMPHGSLEKSLYSSN---YILDIFQRLNIMVDVATTLEYLHFGYSA---PVIHCDLKPSNVLLDDNM 917 (982)
Q Consensus 844 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~L~yLH~~~~~---~ivHrDlkp~NILl~~~~ 917 (982)
++..++..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++ ||+||||||+||+++.++
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~ 171 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDEEF 171 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTC
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCC
Confidence 9999999999999999999999998643 34899999999999999999999 77 999999999999999999
Q ss_pred cEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 918 VAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 918 ~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.+||+|||+|+...... ........||+.|+|||++.+..++. .+|+|++|+
T Consensus 172 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~ 223 (326)
T 3uim_A 172 EAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSE---KTDVFGYGV 223 (326)
T ss_dssp CEEECCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECH---HHHHHHHHH
T ss_pred CEEeccCccccccCccc-ccccccccCCcCccCHHHhccCCCCc---cccchhHHH
Confidence 99999999998764332 22334566999999999997766553 355666664
No 86
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.96 E-value=2.3e-30 Score=290.01 Aligned_cols=185 Identities=23% Similarity=0.335 Sum_probs=158.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccch------hhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGR------AFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
..++|++.+.||+|+||.||+|+.. +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 3568999999999999999999865 5899999999754321 34678999999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecC
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGI 926 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kL~DFGl 926 (982)
.++||||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||++++++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 99999999999999999654 45899999999999999999999 99999999999999998776 799999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
++.+.... ......||+.|+|||++.+..++.. +|+|++|
T Consensus 166 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 205 (361)
T 2yab_A 166 AHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLE---ADMWSIG 205 (361)
T ss_dssp CEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTH---HHHHHHH
T ss_pred ceEcCCCC---ccccCCCCccEECchHHcCCCCCcc---ccHHHHH
Confidence 99764322 2345679999999999977666544 4455555
No 87
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.96 E-value=1.1e-30 Score=290.70 Aligned_cols=188 Identities=23% Similarity=0.332 Sum_probs=157.6
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhc-CCccceeEEeeecCCCe
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEF 850 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 850 (982)
....++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|.++++.+ +||||+++++++.+++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345689999999999999999999965 58999999997542 23456678899999877 99999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999997643 4899999999999999999999 999999999999999999999999999999864
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.... ......+||+.|+|||++.+..++.. +|+|++|
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 205 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHS---VDWWSFG 205 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTH---HHHHHHH
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCCh---hhhHHHH
Confidence 2221 22345789999999999987766644 3445555
No 88
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3e-30 Score=283.65 Aligned_cols=273 Identities=20% Similarity=0.180 Sum_probs=225.6
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCC--CCccccCcCCCCeEE
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGS--IPITLGKLQKLQGLH 504 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ 504 (982)
+.++.+++.++.++... ...+++|++++|++++..+..|.++++|+.|+|++|+++.. .|..+..+++|++|+
T Consensus 10 ~~l~c~~~~l~~ip~~~-----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGI-----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TEEECCSSCCSSCCSCC-----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CEEEcCCCCcccCCCCC-----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 36677777776665432 35678888888888876666788999999999999999843 367777899999999
Q ss_pred eeccCCCCCCCcccCCCccccEEEccCCcCCcCCC-ccccCCCcccccccCCCcccccc-cccccccCceEEecCCCccc
Q 036229 505 LEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIP-ACFSNLASLGTLSLGSNKLTSIP-LTIWNLKGMLYLNFSSNFFT 582 (982)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~Ls~N~l~ 582 (982)
|++|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|+++.++ ..+..+++|++|++++|.++
T Consensus 85 Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 9999998 467778999999999999999987665 67899999999999999999554 45667899999999999998
Q ss_pred C-CCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccc
Q 036229 583 G-PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISL 661 (982)
Q Consensus 583 ~-~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 661 (982)
+ ..|..+..+++|+.||+++|++++..|..|+.+++|++|+|++|++++..+..|..+++|+.|||++|++++..|..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 7 678889999999999999999999889999999999999999999998888899999999999999999999999999
Q ss_pred cccc-ccceeecCCCcccccCCCCC---CCCCCCCcccccCcccCCCC
Q 036229 662 EKLS-YLEDLDLSFNKLKGEIPKGG---SFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 662 ~~l~-~L~~l~ls~N~l~~~~p~~~---~~~~~~~~~~~gn~~lc~~~ 705 (982)
..++ +|++|+|++|+++|.++... ++..........+...|..|
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred HhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 9884 89999999999998765321 11122222334566677665
No 89
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.96 E-value=9.9e-31 Score=294.92 Aligned_cols=189 Identities=28% Similarity=0.433 Sum_probs=159.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe--------CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhc-CCccceeEEeeecCC
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI--------GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTE 848 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 848 (982)
.++|++.+.||+|+||.||+|+. .++..||||+++... ....+++.+|+++++++ +||||+++++++..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46899999999999999999975 235789999997543 34457889999999999 899999999999999
Q ss_pred CeeEEEEEeccCCChHHHHhcCC---------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 036229 849 EFKALILEYMPHGSLEKSLYSSN---------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL 913 (982)
Q Consensus 849 ~~~~lv~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl 913 (982)
+..|+||||+++|+|.+++.... ..+++.++..++.||+.||+||| ++||+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998643 24788999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 914 DDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 914 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+.++.+||+|||+|+...............+|+.|+|||++.+..++.. +|+|++|+
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~ 293 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGV 293 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHH---HHHHHHHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcH---HHHHHHHH
Confidence 9999999999999997654433333345567889999999977666544 45566664
No 90
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2.8e-29 Score=291.67 Aligned_cols=250 Identities=25% Similarity=0.286 Sum_probs=227.1
Q ss_pred ccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEe
Q 036229 426 LTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHL 505 (982)
Q Consensus 426 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 505 (982)
.+.++.+++.++.++.. ++..+++|++++|++++..|..|.++++|+.|+|++|+|+++.|..|.++++|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~-----~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQG-----IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SCEEECCSSCCSSCCSC-----CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CcEEEECCCCcCccCCC-----CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 34677777777766543 2357889999999999989999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCC-Ccccccccc-cccccCceEEecCCCcccC
Q 036229 506 EDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS-NKLTSIPLT-IWNLKGMLYLNFSSNFFTG 583 (982)
Q Consensus 506 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~ 583 (982)
++|+|++..+..|..+++|++|+|++|+|+++.+..|.++++|++|+|++ |.++.+|.. +..+++|++|++++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999988888899999999999999999988888999999999999999 678888875 5679999999999999996
Q ss_pred CCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccc
Q 036229 584 PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEK 663 (982)
Q Consensus 584 ~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 663 (982)
. | .+..+++|+.|||++|++++..|..|.++++|++|+|++|++++..|.+|.++++|+.|+|++|+|++..+..+..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 5 3 5889999999999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred ccccceeecCCCcccccCC
Q 036229 664 LSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 664 l~~L~~l~ls~N~l~~~~p 682 (982)
+++|+.|+|++|++.+.+.
T Consensus 289 l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCEECSTT
T ss_pred ccCCCEEEccCCCcCCCCC
Confidence 9999999999999988765
No 91
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2.6e-30 Score=285.59 Aligned_cols=185 Identities=20% Similarity=0.321 Sum_probs=160.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.. ......+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468999999999999999999865 5899999998754 33456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC--CCcEEEEeecCceeecCCCC
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~~~~~~~ 935 (982)
+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||++..+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999876667899999999999999999999 999999999999999986 7899999999999764322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..++.. +|+|++|+
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 191 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTA---TDMWSLGT 191 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHH---HHHHHHHH
T ss_pred --ccccccCChhhcCcHHhcCCCCCch---hhHHHHHH
Confidence 2345679999999999977665543 45566663
No 92
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.96 E-value=8.5e-31 Score=289.91 Aligned_cols=188 Identities=23% Similarity=0.319 Sum_probs=156.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999865 68999999997543 2334678899999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
|+++|+|.+++... ..+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999998654 35899999999999999999999 999999999999999999999999999999876443333
Q ss_pred eeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.......||+.|+|||++.+..+... .+|+|++|
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG 195 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAE--PVDVWSCG 195 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHH--HHHHHHHH
T ss_pred cccCCCccCcCccCcHHhccCCCCCC--cccHHHHH
Confidence 33456789999999999976644222 24455555
No 93
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.96 E-value=2.1e-30 Score=287.05 Aligned_cols=190 Identities=26% Similarity=0.437 Sum_probs=158.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|++. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+++..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467889999999999999999863 3567999999754 33455788999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877677999999999999999999999 999999999999999999999999999999976433
Q ss_pred CC-ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 934 DQ-SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 934 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
.. ........+|+.|+|||++.+..++. .+|+|++|++
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~---~~Di~slG~i 243 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSS---ASDVWSFGVV 243 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECH---HHHHHHHHHH
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCc---HHHHHHHHHH
Confidence 22 22233445688999999997766554 3556666643
No 94
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.96 E-value=2e-30 Score=285.66 Aligned_cols=182 Identities=27% Similarity=0.340 Sum_probs=157.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999864 69999999997542 23456778899999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.+|.+||+|||+|+.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999997644 5899999999999999999999 999999999999999999999999999999875321
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
....+||+.|+|||++.+..++.. +|+|++|
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 190 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKS---IDWWSFG 190 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTT---HHHHHHH
T ss_pred ----cccccCCccccCHhHhcCCCCCcc---cchhhhH
Confidence 234679999999999987766644 3445555
No 95
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.7e-29 Score=292.35 Aligned_cols=244 Identities=21% Similarity=0.217 Sum_probs=207.2
Q ss_pred EEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcc
Q 036229 86 LNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNAL 165 (982)
Q Consensus 86 L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 165 (982)
++.++.+++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 444556666 6777665 6899999999999988888999999999999999999988888899999999999999999
Q ss_pred cccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccccc-ccccccccchhhhhccCCCCCCchhh
Q 036229 166 SGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAI-PKEIGNLTKLKELYLGYSGLQGEIPR 244 (982)
Q Consensus 166 ~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~ 244 (982)
+ .+|...|..+++|++|+|++|+++...+..|.++++|++|+|++|+..+.+ +..|.++++|++|+|++|+++. +|
T Consensus 125 ~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~- 201 (440)
T 3zyj_A 125 T-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP- 201 (440)
T ss_dssp S-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-
T ss_pred C-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-
Confidence 8 788777799999999999999999888889999999999999985544444 4478899999999999999984 44
Q ss_pred hcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCC
Q 036229 245 EFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTL 324 (982)
Q Consensus 245 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 324 (982)
.+..+++|+.|++++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|||++|++++..+..+..+++|
T Consensus 202 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC
Confidence 47888888889998888888888888888888999998888888888888888888888888888887777777777778
Q ss_pred ceeecCCCcCC
Q 036229 325 TGLGLQSNSLS 335 (982)
Q Consensus 325 ~~L~L~~N~l~ 335 (982)
+.|+|++|++.
T Consensus 282 ~~L~L~~Np~~ 292 (440)
T 3zyj_A 282 ERIHLHHNPWN 292 (440)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEcCCCCcc
Confidence 77777777764
No 96
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.2e-29 Score=278.75 Aligned_cols=224 Identities=21% Similarity=0.260 Sum_probs=194.9
Q ss_pred cccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEcc
Q 036229 451 SLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLS 530 (982)
Q Consensus 451 ~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 530 (982)
.++.|++++|+++ .+|..+..+++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|..+..+++|++|+|+
T Consensus 82 ~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~ 158 (328)
T 4fcg_A 82 GRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIR 158 (328)
T ss_dssp TCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEE
T ss_pred ceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECC
Confidence 3455555555555 45666777888888888888888 77888888888888888888888 678888888888888888
Q ss_pred CCcCCcCCCccccC---------CCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecc
Q 036229 531 GNKLSGSIPACFSN---------LASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFS 601 (982)
Q Consensus 531 ~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls 601 (982)
+|++.+.+|..+.. +++|++|+|++|+++.+|..+..+++|++|++++|++++ +|..++.+++|+.|+++
T Consensus 159 ~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 159 ACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLR 237 (328)
T ss_dssp EETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECT
T ss_pred CCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECc
Confidence 88777788877654 999999999999999999999999999999999999996 56679999999999999
Q ss_pred cccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCccc
Q 036229 602 TNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLK 678 (982)
Q Consensus 602 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 678 (982)
+|++.+.+|..++.+++|++|+|++|++.+.+|.+|+++++|+.|+|++|++.+.+|..+..+++|+.++++.|.+.
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988775
No 97
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.96 E-value=2.1e-30 Score=289.34 Aligned_cols=186 Identities=22% Similarity=0.255 Sum_probs=157.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCC-CeEEEEEEeecc---cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGE-GMEVAVKVFDLQ---CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|+... ++.||+|+++.. .....+.+..|.++++.+ +||+|+++++++++.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 45789999999999999999999754 889999999754 223456778899999988 8999999999999999999
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||++||+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997644 4899999999999999999999 99999999999999999999999999999986422
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
. .......+||+.|+|||++.+..++.. +|+|++|
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 208 (353)
T 2i0e_A 174 D--GVTTKTFCGTPDYIAPEIIAYQPYGKS---VDWWAFG 208 (353)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBSTH---HHHHHHH
T ss_pred C--CcccccccCCccccChhhhcCCCcCCc---ccccchH
Confidence 2 223345789999999999987766644 3344444
No 98
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-30 Score=287.73 Aligned_cols=247 Identities=21% Similarity=0.234 Sum_probs=118.3
Q ss_pred CCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcc-cCccCcccc-------CcCCCCccccccCcccccCchhhh-
Q 036229 104 LSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQL-SGAFPSFIF-------NKSSLQHLDFSYNALSGEIPANIC- 174 (982)
Q Consensus 104 l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~ip~~~~- 174 (982)
.++|+.|++++|.+ .+|..+... |++|+|++|++ .+.+|..+. ++++|++|+|++|.+++.+|..+|
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34444555555554 444444433 45555555555 233444333 444455555555555444444432
Q ss_pred cCCCCCCeeeecceeeecccCCCccCc-----CcccEEEeeccccccccccccccccchhhhhccCCCCCCc--hhhhc-
Q 036229 175 SNLPFLESISLSQNMFHGRIPSALSNC-----KYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGE--IPREF- 246 (982)
Q Consensus 175 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~~~- 246 (982)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 4444455555555554443 4444444 4455555555555444444455555555555555544433 12222
Q ss_pred -CCCcccceEeccccccCC--cCC-hhhhccCCCcEEEccCCccccCCC-ccccccCCCcEEEccCccccccCcccccCC
Q 036229 247 -GNLAELELMALQVSNLQG--EIP-QELANLTGLEVLKLGKNFLTGEIP-PEIHNLHNLKLLDLSHNKLVGAVPATIFNM 321 (982)
Q Consensus 247 -~~l~~L~~L~L~~n~l~~--~~p-~~l~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 321 (982)
..+++|+.|++++|++++ .++ ..+.++++|++|+|++|++++..| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 444455555555554442 111 223344555555555555554442 23344455555555555554 3333322
Q ss_pred CCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCcc
Q 036229 322 STLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSG 385 (982)
Q Consensus 322 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~ 385 (982)
++|++|+|++|++++. |. +..+++|++|++++|++++
T Consensus 274 -------------------------~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 -------------------------AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp -------------------------SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred -------------------------CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 4456666666666644 43 5566666666666666654
No 99
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.96 E-value=1.3e-30 Score=294.22 Aligned_cols=193 Identities=18% Similarity=0.241 Sum_probs=160.3
Q ss_pred HhcCCCccceeeeeceEEEEEEE------eCCCeEEEEEEeecccchhhhhHHHHHHHhhhcC---CccceeEEeeecCC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKAR------IGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR---HRNLIKVISSCSTE 848 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~ 848 (982)
..++|.+.+.||+|+||.||+|. ..+++.||+|+++... ..++..|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 45789999999999999999994 4468899999987543 456777888888876 99999999999999
Q ss_pred CeeEEEEEeccCCChHHHHhc----CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---------
Q 036229 849 EFKALILEYMPHGSLEKSLYS----SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD--------- 915 (982)
Q Consensus 849 ~~~~lv~E~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~--------- 915 (982)
+..++||||+++|+|.+++.. ....+++..+..++.|++.||+||| ++|||||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999974 3456899999999999999999999 999999999999999988
Q ss_pred --CCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 916 --NMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 916 --~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
++.+||+|||+|+.+............+||+.|||||++.+..++.. +|+|++| ++.+.+|
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~elltg 281 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ---IDYFGVAATVYCMLFG 281 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTH---HHHHHHHHHHHHHHHS
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcc---ccHHHHHHHHHHHHhC
Confidence 89999999999987643334445566789999999999988766644 4455555 4444444
No 100
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.8e-29 Score=288.57 Aligned_cols=250 Identities=24% Similarity=0.263 Sum_probs=225.0
Q ss_pred ccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEe
Q 036229 426 LTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHL 505 (982)
Q Consensus 426 L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 505 (982)
.+.++.+++.++.++... ...++.|++++|++++..+..|.++++|+.|+|++|+|+++.+..|.++++|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~-----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGI-----STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp SCEEECCSCCCSSCCSCC-----CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCEEEeCCCCcCcCCCCC-----CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 346777777777665433 356888888888999888899999999999999999999888899999999999999
Q ss_pred eccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCC-Ccccccccc-cccccCceEEecCCCcccC
Q 036229 506 EDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS-NKLTSIPLT-IWNLKGMLYLNFSSNFFTG 583 (982)
Q Consensus 506 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~ 583 (982)
++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++ |.++.+|.. +.++++|++|++++|.++.
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 99999988778899999999999999999988888999999999999999 667788874 5679999999999999985
Q ss_pred CCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccc
Q 036229 584 PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEK 663 (982)
Q Consensus 584 ~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 663 (982)
. | .+..+++|+.|||++|++++..|..|.++++|++|+|++|++++..+.+|.++++|+.|+|++|+|++..+..+..
T Consensus 200 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 I-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp C-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred c-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 4 4 5889999999999999999999999999999999999999999999999999999999999999999888888899
Q ss_pred ccccceeecCCCcccccCC
Q 036229 664 LSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 664 l~~L~~l~ls~N~l~~~~p 682 (982)
+++|+.|+|++|++.+.+.
T Consensus 278 l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CTTCCEEECCSSCEECSST
T ss_pred ccCCCEEEcCCCCccCCCC
Confidence 9999999999999988764
No 101
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=2.5e-31 Score=292.69 Aligned_cols=266 Identities=20% Similarity=0.215 Sum_probs=224.4
Q ss_pred cCCCCCCCCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCc-cccCcchhh-------hccC
Q 036229 59 AKNWNTSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRL-SGSIPSAIF-------TLYT 130 (982)
Q Consensus 59 ~~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~-~~~~p~~~~-------~l~~ 130 (982)
..+|.....|+.|..+.......+++.|++++|.+ .+|+.+... |+.|+|++|++ .+.+|..+. ++++
T Consensus 21 ~~~~~~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~ 96 (312)
T 1wwl_A 21 KPDWSSAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISG 96 (312)
T ss_dssp SCCGGGGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSC
T ss_pred ccchHHHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCC
Confidence 45687667777777665442345788888999999 888877766 99999999999 567888776 7999
Q ss_pred CcEEEccCCcccCccCccc--cCcCCCCccccccCcccccCchhhhcCC-----CCCCeeeecceeeecccCCCccCcCc
Q 036229 131 LKYVNFRGNQLSGAFPSFI--FNKSSLQHLDFSYNALSGEIPANICSNL-----PFLESISLSQNMFHGRIPSALSNCKY 203 (982)
Q Consensus 131 L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~ip~~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 203 (982)
|++|+|++|++++.+|..+ +.+++|++|+|++|.+++. |+.+ ..+ ++|++|+|++|++++..|..|+++++
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~-~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWL-AELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHH-HHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHH-HHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 9999999999999999986 8999999999999999965 7554 666 99999999999999988899999999
Q ss_pred ccEEEeeccccccc--ccccc--ccccchhhhhccCCCCCCc--hh-hhcCCCcccceEeccccccCCcCC-hhhhccCC
Q 036229 204 LEILSLSINNLLGA--IPKEI--GNLTKLKELYLGYSGLQGE--IP-REFGNLAELELMALQVSNLQGEIP-QELANLTG 275 (982)
Q Consensus 204 L~~L~Ls~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~~--~~-~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~ 275 (982)
|++|+|++|++.+. .|..+ +.+++|++|+|++|++++. ++ ..+.++++|+.|++++|++++..| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 99999999998865 34444 8999999999999999942 23 456788999999999999998875 55778899
Q ss_pred CcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCC
Q 036229 276 LEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLS 335 (982)
Q Consensus 276 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 335 (982)
|++|+|++|+|+ .+|..+. ++|++|||++|+|++. |. +..+++|+.|+|++|+++
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 999999999999 6677766 8999999999999976 65 777788877777777665
No 102
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.96 E-value=1.9e-30 Score=285.73 Aligned_cols=186 Identities=24% Similarity=0.347 Sum_probs=155.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 357899999999999999999998889999999986442 233467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++ ++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-- 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP-- 172 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC--
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCC--
Confidence 99975 888888877777999999999999999999999 999999999999999999999999999999876322
Q ss_pred ceeecccccccccccCceeeee-eeeeEEeeEeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFL 972 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~ 972 (982)
........||+.|+|||++.+. .++.. +|+|++|
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwslG 207 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTS---VDIWSIG 207 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTH---HHHHHHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCch---HHhHHHH
Confidence 2223456789999999998653 34433 4555555
No 103
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=2e-29 Score=292.87 Aligned_cols=245 Identities=21% Similarity=0.196 Sum_probs=206.1
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCc
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNA 164 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 164 (982)
.++.++.+++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 58 ~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 58 KVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNW 134 (452)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCc
Confidence 3455566666 6776554 689999999999998888899999999999999999998888899999999999999999
Q ss_pred ccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccccc-ccccccccchhhhhccCCCCCCchh
Q 036229 165 LSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAI-PKEIGNLTKLKELYLGYSGLQGEIP 243 (982)
Q Consensus 165 l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~ 243 (982)
++ .+|...|..+++|++|+|++|++++..+..|.++++|++|+|++|+..+.+ +..|.++++|++|+|++|++++. |
T Consensus 135 l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~ 212 (452)
T 3zyi_A 135 LT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P 212 (452)
T ss_dssp CS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C
T ss_pred CC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c
Confidence 98 677777789999999999999999877888999999999999985443344 44688899999999999999854 3
Q ss_pred hhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCC
Q 036229 244 REFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMST 323 (982)
Q Consensus 244 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 323 (982)
.+..+++|+.|++++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|||++|++++..+..+..+++
T Consensus 213 -~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 291 (452)
T 3zyi_A 213 -NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRY 291 (452)
T ss_dssp -CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTT
T ss_pred -cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccC
Confidence 5778888889999999888888888888888999999999888888888888888889999888888777777777777
Q ss_pred CceeecCCCcCC
Q 036229 324 LTGLGLQSNSLS 335 (982)
Q Consensus 324 L~~L~L~~N~l~ 335 (982)
|+.|+|++|++.
T Consensus 292 L~~L~L~~Np~~ 303 (452)
T 3zyi_A 292 LVELHLHHNPWN 303 (452)
T ss_dssp CCEEECCSSCEE
T ss_pred CCEEEccCCCcC
Confidence 777777777665
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.96 E-value=2.2e-30 Score=288.88 Aligned_cols=185 Identities=24% Similarity=0.301 Sum_probs=157.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++++ +||||+++++++.+++..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 367999999999999999999965 58999999997542 23456688899999988 89999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997643 5899999999999999999999 999999999999999999999999999999864222
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.......+||+.|+|||++.+..++.. +|+|++|
T Consensus 164 --~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 197 (345)
T 3a8x_A 164 --GDTTSTFCGTPNYIAPEILRGEDYGFS---VDWWALG 197 (345)
T ss_dssp --TCCBCCCCSCGGGCCHHHHTTCCBCTH---HHHHHHH
T ss_pred --CCcccccCCCccccCccccCCCCCChH---HhHHHHH
Confidence 123345689999999999987766544 3445554
No 105
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.96 E-value=5.9e-30 Score=289.26 Aligned_cols=185 Identities=21% Similarity=0.337 Sum_probs=160.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++..........+.+|+++++.++||||+++++++.+++..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 468999999999999999999864 5899999999866555567889999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc--CCCcEEEEeecCceeecCCCC
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD--DNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kL~DFGla~~~~~~~~ 935 (982)
+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||+|+......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667899999999999999999999 99999999999999997 45789999999999764322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
......||+.|+|||++.+..++.. +|+|++|
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG 237 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFY---TDMWAIG 237 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHH
T ss_pred --ceeeeccCCCccCchhccCCCCCCc---ccEeeHh
Confidence 2234579999999999987666544 4556666
No 106
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.96 E-value=1.8e-30 Score=293.79 Aligned_cols=192 Identities=23% Similarity=0.348 Sum_probs=160.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|++. +++.||||+++... ....+++.+|++++++++||||+++++++..++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 4568899999999999999999975 68999999987542 334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++|+|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876667899999999999999999999 99999999999999999999999999999986532211
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIF 975 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l 975 (982)
........+++.|+|||++.+..++. .+|+|++|+++
T Consensus 269 ~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~il 305 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAPEALNYGRYSS---ESDVWSFGILL 305 (377)
T ss_dssp ECCSSCCEEEGGGSCHHHHHHCEEEH---HHHHHHHHHHH
T ss_pred eecCCCCCCCcCcCCHhHhccCCCCc---hhhHHHHHHHH
Confidence 11112234677899999997665553 45667777543
No 107
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=283.26 Aligned_cols=278 Identities=18% Similarity=0.179 Sum_probs=186.4
Q ss_pred cEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEE
Q 036229 350 EELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYI 429 (982)
Q Consensus 350 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L 429 (982)
...+.++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|++++|.++.+... .|.++++|++|
T Consensus 34 ~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L 105 (353)
T 2z80_A 34 GICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEED-----SFSSLGSLEHL 105 (353)
T ss_dssp SEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCEE
T ss_pred eEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHh-----hcCCCCCCCEE
Confidence 34555555555 3344332 3566666666666655555566666666555555555543221 25555555566
Q ss_pred EccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCC-ccccCcCCCCeEEeecc
Q 036229 430 GLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIP-ITLGKLQKLQGLHLEDN 508 (982)
Q Consensus 430 ~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N 508 (982)
+|++|++++ ..+..|+++++|++|++++|++++..+ ..|..+++|++|++++|
T Consensus 106 ~Ls~n~l~~--------------------------~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 106 DLSYNYLSN--------------------------LSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp ECCSSCCSS--------------------------CCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEES
T ss_pred ECCCCcCCc--------------------------CCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCC
Confidence 666664432 233346677788888888888875554 57888888888888888
Q ss_pred -CCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccc-cccCceEEecCCCcccCCCc
Q 036229 509 -KLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIW-NLKGMLYLNFSSNFFTGPLP 586 (982)
Q Consensus 509 -~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~Ls~N~l~~~~~ 586 (982)
.+++..+..|.++++|++|++++|++++..|..|.++++|++|++++|+++.+|..+. .+++|++|++++|.+++..+
T Consensus 160 ~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 239 (353)
T 2z80_A 160 DTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHF 239 (353)
T ss_dssp SSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCC
T ss_pred ccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccc
Confidence 4776667788888888888888888888888888888888888888888888877654 46778888888887776544
Q ss_pred cccccccccceeecccccccccccccccCccCcceEecccccccC----CccccccCCCCCCeeeCCCCcCCCCCCcc-c
Q 036229 587 LDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQG----SISESFGDLISLKSLNLSNNNLSRSIPIS-L 661 (982)
Q Consensus 587 ~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-l 661 (982)
..+.. ......++.++|++|.+++ .+|+++.++++|+.|+|++|+++. +|.. |
T Consensus 240 ~~l~~---------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~~~~~ 297 (353)
T 2z80_A 240 SELST---------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VPDGIF 297 (353)
T ss_dssp C---------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CCTTTT
T ss_pred ccccc---------------------ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cCHHHH
Confidence 33221 1123345555555555544 467778888888888888888874 5554 5
Q ss_pred ccccccceeecCCCcccccCCC
Q 036229 662 EKLSYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 662 ~~l~~L~~l~ls~N~l~~~~p~ 683 (982)
..+++|++|++++|++.|.+|.
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHHH
T ss_pred hcCCCCCEEEeeCCCccCcCCC
Confidence 7888888888888888887774
No 108
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.96 E-value=3.7e-30 Score=287.37 Aligned_cols=182 Identities=24% Similarity=0.308 Sum_probs=157.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 367999999999999999999965 58999999997542 23456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999997654 4899999999999999999999 999999999999999999999999999999976322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
....+||+.|+|||++.+..++.. +|+|++|
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 225 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKA---VDWWALG 225 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTH---HHHHHHH
T ss_pred ----cccccCCccccCHHHhcCCCCCCc---CCEeccc
Confidence 234679999999999987766544 4445555
No 109
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.96 E-value=5.9e-30 Score=280.16 Aligned_cols=188 Identities=24% Similarity=0.366 Sum_probs=152.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc--------------------------hhhhhHHHHHHHhh
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG--------------------------RAFKSFDVECEMMK 831 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 831 (982)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+++.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 478999999999999999999864 589999999864421 12367889999999
Q ss_pred hcCCccceeEEeeecC--CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCC
Q 036229 832 SIRHRNLIKVISSCST--EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPS 909 (982)
Q Consensus 832 ~l~h~nIv~l~~~~~~--~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~ 909 (982)
+++||||+++++++.+ .+..++||||+++++|.++.. ...+++.++..++.|++.||+||| ++||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999976 568899999999999988654 345899999999999999999999 999999999999
Q ss_pred CEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 910 NVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 910 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||+++.++.+||+|||+++...... .......||+.|+|||++.+......+..+|+|++|+
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 228 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGV 228 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHH
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHH
Confidence 9999999999999999998764332 2234567999999999997654322333456677664
No 110
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.96 E-value=8.5e-30 Score=274.32 Aligned_cols=189 Identities=25% Similarity=0.380 Sum_probs=162.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
..++|++.+.||+|+||.||+|+..++..||+|+++... ...+++.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 356899999999999999999999888999999997543 2346789999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....... ..
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 160 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YV 160 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EE
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hh
Confidence 9999999999877667899999999999999999999 9999999999999999999999999999998764332 22
Q ss_pred eecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 938 TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
......+|+.|+|||++.+..++.. +|+|++|++
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 194 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSK---SDVWAFGIL 194 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETT---HHHHHHHHH
T ss_pred cccCCCcCcccCCHHHHhccCCchh---hhhHHHHHH
Confidence 3344567788999999977665543 556666643
No 111
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.7e-30 Score=286.42 Aligned_cols=185 Identities=23% Similarity=0.366 Sum_probs=156.3
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|.+.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999996 568999999997432 22345788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+ +|++.+++...+ .+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+|.......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 679999887654 4899999999999999999999 9999999999999999999999999999998653322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.....+||+.|+|||++.+..+... .+|+|++|+
T Consensus 163 ---~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG~ 196 (336)
T 3h4j_B 163 ---FLKTSCGSPNYAAPEVINGKLYAGP--EVDVWSCGI 196 (336)
T ss_dssp ---TTCCCTTSTTTSCGGGSCCSGGGCH--HHHHHHHHH
T ss_pred ---ccccccCCcCcCCHHHHcCCCCCCC--ccchhHHHH
Confidence 2245679999999999987655322 345566553
No 112
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.96 E-value=4.8e-30 Score=280.07 Aligned_cols=187 Identities=24% Similarity=0.388 Sum_probs=153.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 468999999999999999999864 5899999998543 234456789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999997654 5899999999999999999999 9999999999999999999999999999998653221
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
........||+.|+|||++.+..++.. +|+|++|+
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 200 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDEC---TDIYSIGI 200 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTT---HHHHHHHH
T ss_pred -ccccCccccCccccCHhHhcCCCCCch---HhHHHHHH
Confidence 122344679999999999977665533 45566663
No 113
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4.2e-31 Score=318.70 Aligned_cols=407 Identities=14% Similarity=0.089 Sum_probs=204.4
Q ss_pred cCcchhhhccCCcEEEccCCcc---cCccCcccc------------CcCCCCccccccCcccccCchhhhcCCCC-CCee
Q 036229 120 SIPSAIFTLYTLKYVNFRGNQL---SGAFPSFIF------------NKSSLQHLDFSYNALSGEIPANICSNLPF-LESI 183 (982)
Q Consensus 120 ~~p~~~~~l~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~-L~~L 183 (982)
..+..+..+++|++|+|+++.. .+.+|..++ ++++|++|+|++|.+++..+..+...+++ |++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 3444566889999999988643 133443332 56677777777776665444444222333 7777
Q ss_pred eeccee-eec-ccCCCccCcCcccEEEeeccccccc----cccccccccchhhhhccCCCCC----CchhhhcCCCcccc
Q 036229 184 SLSQNM-FHG-RIPSALSNCKYLEILSLSINNLLGA----IPKEIGNLTKLKELYLGYSGLQ----GEIPREFGNLAELE 253 (982)
Q Consensus 184 ~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~ 253 (982)
+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|++++|.++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 777665 221 1122223566677777777766544 2333445566666666666665 23334444556666
Q ss_pred eEeccccccCCcCChhhhccCCCcEEEccCCccc---cCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecC
Q 036229 254 LMALQVSNLQGEIPQELANLTGLEVLKLGKNFLT---GEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQ 330 (982)
Q Consensus 254 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 330 (982)
.|++++|.+.+ +|..+.++++|++|+++..... ...+..+..+++|+.|+++++.. +.+|..+..+++|
T Consensus 224 ~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L------ 295 (592)
T 3ogk_B 224 SVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQI------ 295 (592)
T ss_dssp EEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGC------
T ss_pred EEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCC------
Confidence 66666665554 4455666666666666542221 12223444555555555555432 2344444445555
Q ss_pred CCcCCCCcCccccccCCCccEEEccCCccccccc-ccccCCCCCCEEEeccccCccccCCccccCCccceeccc------
Q 036229 331 SNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIP-RFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLH------ 403 (982)
Q Consensus 331 ~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~------ 403 (982)
++|+|++|.+++... ..+..+++|++|+++++.....++..+..+++|+.|+++
T Consensus 296 -------------------~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~ 356 (592)
T 3ogk_B 296 -------------------RKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQ 356 (592)
T ss_dssp -------------------CEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSS
T ss_pred -------------------cEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcccc
Confidence 455555444433222 223445555555555221111122222344555555554
Q ss_pred -----ccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCccccc-ccccc
Q 036229 404 -----YNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGN-LTNLI 477 (982)
Q Consensus 404 -----~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~-l~~L~ 477 (982)
.|.++..... ..+..+++|++|+++.|.+ ++..+..+.. +++|+
T Consensus 357 ~~~~~~~~~~~~~~~----~l~~~~~~L~~L~l~~~~l--------------------------~~~~~~~l~~~~~~L~ 406 (592)
T 3ogk_B 357 GMEDEEGLVSQRGLI----ALAQGCQELEYMAVYVSDI--------------------------TNESLESIGTYLKNLC 406 (592)
T ss_dssp TTSSTTCCCCHHHHH----HHHHHCTTCSEEEEEESCC--------------------------CHHHHHHHHHHCCSCC
T ss_pred ccccccCccCHHHHH----HHHhhCccCeEEEeecCCc--------------------------cHHHHHHHHhhCCCCc
Confidence 1233221110 0122344555555544433 2222223332 55566
Q ss_pred eEEec----CCCCCCC-----CCccccCcCCCCeEEeecc--CCCCCCCcccC-CCccccEEEccCCcCCcC-CCccccC
Q 036229 478 GIYLG----GNKLNGS-----IPITLGKLQKLQGLHLEDN--KLEGPIPDDIC-RLTKLYELGLSGNKLSGS-IPACFSN 544 (982)
Q Consensus 478 ~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~-~p~~~~~ 544 (982)
.|+++ .|++++. ++..+.++++|+.|+|+++ .+++..+..+. .+++|++|++++|++++. ++..+.+
T Consensus 407 ~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 486 (592)
T 3ogk_B 407 DFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRG 486 (592)
T ss_dssp EEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTC
T ss_pred EEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhc
Confidence 66664 4555543 2223455666666666532 24433333332 256666666666666542 3334455
Q ss_pred CCcccccccCCCcccc--cccccccccCceEEecCCCcccC
Q 036229 545 LASLGTLSLGSNKLTS--IPLTIWNLKGMLYLNFSSNFFTG 583 (982)
Q Consensus 545 l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~Ls~N~l~~ 583 (982)
+++|++|+|++|.++. ++..+..+++|++|++++|+++.
T Consensus 487 ~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 487 CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 6666666666666652 33333445566666666666553
No 114
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.96 E-value=3.9e-30 Score=288.14 Aligned_cols=186 Identities=20% Similarity=0.345 Sum_probs=155.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-----chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-----GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++++.++||||+++++++.+++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457999999999999999999864 58999999986432 123567899999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHhcC---CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecC
Q 036229 853 LILEYMPHGSLEKSLYSS---NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFGI 926 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kL~DFGl 926 (982)
+||||+++++|.+.+... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998887643 335799999999999999999999 999999999999999986554 99999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
+....... .......||+.|+|||++.+..++.. +|+|++|
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 220 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKP---VDVWGCG 220 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTH---HHHHHHH
T ss_pred eeEecCCC--eeecCCcCCcCccCHHHHcCCCCCch---HhhHHHH
Confidence 98764322 22345679999999999977666543 4556666
No 115
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.96 E-value=4.7e-30 Score=282.02 Aligned_cols=191 Identities=28% Similarity=0.435 Sum_probs=151.5
Q ss_pred HHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 774 ELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 774 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
++....++|++.+.||+|+||.||+|+. +++.||||++.... ....+++.+|++++++++||||+++++++...+..
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 3334567899999999999999999987 68899999986543 33456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 999999999999999976532 3889999999999999999999 999 999999999999999999999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+..... ........||+.|+|||++.+..++.. +|+|++|+
T Consensus 187 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 227 (309)
T 3p86_A 187 RLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEK---SDVYSFGV 227 (309)
T ss_dssp -----------------CCTTSCHHHHTTCCCCTT---HHHHHHHH
T ss_pred cccccc--ccccccCCCCccccChhhhcCCCCCch---hhHHHHHH
Confidence 864222 222345679999999999977765543 45666663
No 116
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.96 E-value=2.2e-30 Score=291.68 Aligned_cols=200 Identities=23% Similarity=0.372 Sum_probs=165.5
Q ss_pred ccCCHHHHHHHhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhc-CCccce
Q 036229 768 RRFSYLELCRATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSI-RHRNLI 839 (982)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv 839 (982)
..++..+++...++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +||||+
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 3455667777889999999999999999999973 246899999997543 33456789999999999 799999
Q ss_pred eEEeeecCCC-eeEEEEEeccCCChHHHHhcCCC----------------------------------------------
Q 036229 840 KVISSCSTEE-FKALILEYMPHGSLEKSLYSSNY---------------------------------------------- 872 (982)
Q Consensus 840 ~l~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~---------------------------------------------- 872 (982)
++++++.+++ ..++||||+++|+|.+++.....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999987755 48999999999999999976432
Q ss_pred -------------------cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 873 -------------------ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 873 -------------------~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
.+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 1889999999999999999999 999999999999999999999999999999876544
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..........||+.|+|||++.+..++.. +|+|++|+
T Consensus 247 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 283 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGV 283 (359)
T ss_dssp TTCEEC--CEECGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred ccchhccccCCCceeEChhhhcCCCCCch---hhhhhHHH
Confidence 44444556778999999999977665533 55666664
No 117
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.96 E-value=6.5e-30 Score=293.93 Aligned_cols=188 Identities=21% Similarity=0.330 Sum_probs=158.1
Q ss_pred HHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
...++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..|+
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3467899999999999999999985 469999999997543 2345678999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc---CCCcEEEEeecCceee
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLL 930 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kL~DFGla~~~ 930 (982)
||||+++|+|.+.+.... .+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+|||+|...
T Consensus 88 v~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 999999999999987654 5899999999999999999999 99999999999999998 4678999999999876
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 164 ~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~---~DIwSlGv 201 (444)
T 3soa_A 164 EGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKP---VDLWACGV 201 (444)
T ss_dssp CTTC--CBCCCSCSCGGGCCHHHHTTCCBCTH---HHHHHHHH
T ss_pred cCCC--ceeecccCCcccCCHHHhcCCCCCCc---cccHHHHH
Confidence 4332 22345689999999999987666544 55666663
No 118
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.96 E-value=4.7e-30 Score=284.56 Aligned_cols=186 Identities=25% Similarity=0.369 Sum_probs=148.2
Q ss_pred hcCCCccceeeeeceEEEEEEEe----CCCeEEEEEEeeccc----chhhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI----GEGMEVAVKVFDLQC----GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46899999999999999999986 468999999997542 2334567889999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||+++++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999997643 4788999999999999999999 999999999999999999999999999999864
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... .......||+.|+|||++.+..++.. .|+|++|+
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 209 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRA---VDWWSLGA 209 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTH---HHHHHHHH
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCc---ccchhHHH
Confidence 3221 22345679999999999977665543 45555553
No 119
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.96 E-value=6.9e-30 Score=286.96 Aligned_cols=185 Identities=21% Similarity=0.404 Sum_probs=157.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4568999999999999999999864 58999999997542 33456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---CcEEEEeecCceeec
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLLI 931 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~~ 931 (982)
|||+++|+|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.+ +.+||+|||+|....
T Consensus 107 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999998754 45899999999999999999999 9999999999999999864 469999999998764
Q ss_pred CCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
... ......||+.|+|||++.+..++.. +|+|++|
T Consensus 183 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 217 (362)
T 2bdw_A 183 DSE---AWHGFAGTPGYLSPEVLKKDPYSKP---VDIWACG 217 (362)
T ss_dssp TCC---SCCCSCSCTTTCCHHHHTTCCCCTH---HHHHHHH
T ss_pred CCc---ccccCCCCccccCHHHHccCCCCch---hhHHHHH
Confidence 222 2235679999999999977666544 4556665
No 120
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.96 E-value=7e-30 Score=278.69 Aligned_cols=185 Identities=24% Similarity=0.319 Sum_probs=156.0
Q ss_pred cCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999864 58999999997543 3334678899999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
|+++ ++.+.+......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--V 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--C
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--c
Confidence 9975 777777666667999999999999999999999 999999999999999999999999999999876322 2
Q ss_pred eeecccccccccccCceeeeee-eeeEEeeEeeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLM 973 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+.. ++. .+|+|++|+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 190 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYST---SIDMWSAGC 190 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCT---HHHHHHHHH
T ss_pred ccccCCccccCCcChHHHcCCCCcCc---hHHHHHHHH
Confidence 2334567899999999986654 343 345566664
No 121
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.96 E-value=2.6e-30 Score=281.45 Aligned_cols=185 Identities=24% Similarity=0.340 Sum_probs=153.2
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
++|++.+.||+|+||.||+|+..+++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5799999999999999999998789999999996543 22346788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP--VR 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc--cc
Confidence 975 999999877677899999999999999999999 999999999999999999999999999999865322 12
Q ss_pred eecccccccccccCceeeee-eeeeEEeeEeeeeeee
Q 036229 938 TQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLM 973 (982)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+. .++. .+|+|++|+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 189 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYST---TIDIWSVGC 189 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCT---HHHHHHHHH
T ss_pred ccccccccccccCchheeCCCCCCc---HHHHHHHHH
Confidence 23345789999999998653 2333 345566653
No 122
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.96 E-value=7.6e-30 Score=283.89 Aligned_cols=191 Identities=23% Similarity=0.364 Sum_probs=154.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCC------
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE------ 849 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 849 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3467999999999999999999975 69999999997543 345678899999999999999999999885432
Q ss_pred ---------------------------------------------------eeEEEEEeccCCChHHHHhcCCC--cCCH
Q 036229 850 ---------------------------------------------------FKALILEYMPHGSLEKSLYSSNY--ILDI 876 (982)
Q Consensus 850 ---------------------------------------------------~~~lv~E~~~~gsL~~~l~~~~~--~~~~ 876 (982)
..++||||+++|+|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999986532 3466
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc----------eeeccccccc
Q 036229 877 FQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS----------ITQTQTLATI 946 (982)
Q Consensus 877 ~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~----------~~~~~~~gt~ 946 (982)
..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++........ .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 678899999999999999 999999999999999999999999999999986543211 1224457999
Q ss_pred ccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 947 GYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 947 ~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
.|+|||++.+..++.. +|+|++|++
T Consensus 241 ~y~aPE~~~~~~~~~~---~Di~slG~i 265 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHK---VDIFSLGLI 265 (332)
T ss_dssp GGSCHHHHHCCCCCTH---HHHHHHHHH
T ss_pred CccChHHhcCCCCcch---hhHHHHHHH
Confidence 9999999987665543 556666643
No 123
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.96 E-value=6.8e-30 Score=299.20 Aligned_cols=193 Identities=24% Similarity=0.349 Sum_probs=160.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +|+.||+|++... .......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999864 6999999999754 223346678999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 855 LEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
|||++||+|.+++.... ..+++..+..++.||+.||+||| ++|||||||||+||+++.+|.+||+|||+|+.+...
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999987643 34899999999999999999999 999999999999999999999999999999876432
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeeccc
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGR 978 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~ 978 (982)
. .....+||+.|+|||++.+..++... ++|++|+.++.+.+
T Consensus 340 ~---~~~~~~GT~~Y~APEvl~~~~~~~~~-DiwSLGvilyeLlt 380 (576)
T 2acx_A 340 Q---TIKGRVGTVGYMAPEVVKNERYTFSP-DWWALGCLLYEMIA 380 (576)
T ss_dssp C---CEECCCSCGGGCCHHHHTTCEESSHH-HHHHHHHHHHHHHH
T ss_pred c---cccccCCCccccCHHHHcCCCCCccc-hHHHHHHHHHHHHh
Confidence 2 23346899999999999877666442 23344444443433
No 124
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=7.8e-29 Score=269.30 Aligned_cols=251 Identities=21% Similarity=0.210 Sum_probs=169.9
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEee
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLE 506 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 506 (982)
+.++.+++.++.++.. ....+++|++++|++++..+..|..+++|+.|++++|++++..|..|.++++|++|+|+
T Consensus 14 ~~~~c~~~~l~~ip~~-----~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-----IPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp CEEECCSSCCSSCCTT-----CCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred eEEEcCcCCcccCCcC-----CCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 3667777766665432 23467777777777777777777778888888888888877777778888888888888
Q ss_pred ccC-CCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccc-cccccCceEEecCCCcccCC
Q 036229 507 DNK-LEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLT-IWNLKGMLYLNFSSNFFTGP 584 (982)
Q Consensus 507 ~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~~ 584 (982)
+|+ +++..|..|..+++|++|++++|++++..|..|.++++|++|++++|+++.+|.. +..+++|++|++++|++++.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 886 7766677777788888888888888777777777777787777777777776654 44566666666666666655
Q ss_pred CccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccc
Q 036229 585 LPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKL 664 (982)
Q Consensus 585 ~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 664 (982)
.+..+..+++|+.|++++|++++..|..|+.+++|++|+|++|++++.++..|..+++|+.|+|++|++....+.. .-+
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~ 247 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLW 247 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHH
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHH
Confidence 5555666666666666666666666666666666666666666666655555666666666666666665433321 122
Q ss_pred cccceeecCCCcccccCCC
Q 036229 665 SYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 665 ~~L~~l~ls~N~l~~~~p~ 683 (982)
..++.+..+.|.+.|..|.
T Consensus 248 ~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 248 AWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHHCCSEECCCBEEESG
T ss_pred HHHHhcccccCccccCCch
Confidence 3355555566666666654
No 125
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.96 E-value=4.1e-30 Score=289.84 Aligned_cols=181 Identities=23% Similarity=0.428 Sum_probs=151.1
Q ss_pred ccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEeccCCC
Q 036229 784 ENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYMPHGS 862 (982)
Q Consensus 784 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~~gs 862 (982)
..+.||+|+||.||+|+. .+++.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 367899999999999986 4589999999987655667789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE--cCCCcEEEEeecCceeecCCCCceeec
Q 036229 863 LEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL--DDNMVAHLSDFGIAKLLIGEDQSITQT 940 (982)
Q Consensus 863 L~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~~ 940 (982)
|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+++.+.... ...
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~ 246 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLK 246 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---ccc
Confidence 99999876667899999999999999999999 9999999999999999 567899999999999764322 223
Q ss_pred ccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 941 QTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 941 ~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...||+.|+|||++.+..++.. +|+|++|+
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 276 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFP---TDMWSVGV 276 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHH---HHHHHHHH
T ss_pred cccCCCcEeChhhccCCCCCcH---HhHHHHHH
Confidence 4579999999999977655543 45566663
No 126
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.96 E-value=4.4e-30 Score=276.74 Aligned_cols=188 Identities=26% Similarity=0.395 Sum_probs=161.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEec
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
.++|++.+.||+|+||.||+|+..+++.||+|++.... ...+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46789999999999999999998889999999997543 23467899999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCcee
Q 036229 859 PHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSIT 938 (982)
Q Consensus 859 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 938 (982)
++++|.+++......+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||+++..... ....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc-cccc
Confidence 999999999877777899999999999999999999 999999999999999999999999999999865322 1222
Q ss_pred ecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 939 QTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
.....+|+.|+|||++.+..++.. +|+|++|++
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~ 196 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSK---SDVWSFGVL 196 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred ccCcccccccCCHHHhcCCCCCch---hhhHHHHHH
Confidence 334567888999999976665543 556666643
No 127
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.96 E-value=3.2e-30 Score=289.89 Aligned_cols=196 Identities=28% Similarity=0.342 Sum_probs=151.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHH-hhhcCCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEM-MKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+..|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467999999999999999999965 58899999997543 2234556677776 577899999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||++||+|.+++.+.+ .+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999997643 4788999999999999999999 999999999999999999999999999999864222
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeec--ccCCC
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFI--GRGNY 981 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~--~~~~f 981 (982)
.......+||+.|+|||++.+..++... ++|++|+.++.+ |..||
T Consensus 193 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~-DiwslG~il~ell~G~~Pf 239 (373)
T 2r5t_A 193 --NSTTSTFCGTPEYLAPEVLHKQPYDRTV-DWWCLGAVLYEMLYGLPPF 239 (373)
T ss_dssp --CCCCCSBSCCCCCCCHHHHTTCCCCTHH-HHHHHHHHHHHHHHSSCTT
T ss_pred --CCccccccCCccccCHHHhCCCCCCchh-hhHHHHHHHHHHHcCCCCC
Confidence 2233457899999999999877666442 233444444433 34444
No 128
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=280.67 Aligned_cols=185 Identities=23% Similarity=0.327 Sum_probs=157.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc------hhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG------RAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457999999999999999999865 589999999975432 1356789999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kL~DFGla 927 (982)
++||||+++++|.+++... ..+++..+..++.|++.||.||| ++||+||||||+||+++.++ .+||+|||+|
T Consensus 90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999999754 45899999999999999999999 99999999999999998877 8999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+...... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 166 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 205 (326)
T 2y0a_A 166 HKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLE---ADMWSIGV 205 (326)
T ss_dssp EECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTH---HHHHHHHH
T ss_pred eECCCCC---ccccccCCcCcCCceeecCCCCCcH---HHHHHHHH
Confidence 8764322 2234679999999999977665543 45566663
No 129
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.96 E-value=3.8e-30 Score=281.23 Aligned_cols=189 Identities=27% Similarity=0.430 Sum_probs=155.7
Q ss_pred hcCCCccceeeeeceEEEEEEEe-----CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCC--Cee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-----GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE--EFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 851 (982)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46899999999999999999984 35899999999876666678899999999999999999999998543 568
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||+++|+|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999877667899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..... .......+++.|+|||++.+..++.. +|+|++|+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 205 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGV 205 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChH---HHHHHHHH
Confidence 33221 22234557888999999977665543 55666664
No 130
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.96 E-value=1.2e-29 Score=296.67 Aligned_cols=195 Identities=25% Similarity=0.359 Sum_probs=161.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367889999999999999999974 59999999997542 23346788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcC---CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 855 LEYMPHGSLEKSLYSS---NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
|||++||+|.+++... ...+++..+..++.||+.||+||| ++||+||||||+||+++.+|.+||+|||+|+.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999999998754 345899999999999999999999 9999999999999999999999999999999764
Q ss_pred CCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
... ......+||+.|+|||++.+..++... ++|++|+.++.+.+|
T Consensus 341 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~-DiwSlGvilyelltG 385 (543)
T 3c4z_A 341 AGQ--TKTKGYAGTPGFMAPELLLGEEYDFSV-DYFALGVTLYEMIAA 385 (543)
T ss_dssp TTC--CCBCCCCSCTTTSCHHHHTTCCBCTHH-HHHHHHHHHHHHHHS
T ss_pred CCC--cccccccCCccccChhhhcCCCCChHH-hcCcchHHHHHHHhC
Confidence 322 122345899999999999887666442 233444444444333
No 131
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.96 E-value=5e-30 Score=289.33 Aligned_cols=190 Identities=23% Similarity=0.434 Sum_probs=149.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+++.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 467999999999999999999864 4778999999754 33445789999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877767999999999999999999999 999999999999999999999999999999876433
Q ss_pred CCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 934 DQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 934 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
... .......+++.|+|||++.+..++. .+|+|++|++
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~SlG~i 239 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTS---ASDVWSYGIV 239 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCH---HHHHHHHHHH
T ss_pred CccceeccCCCcCCCccChhhhccCCcCc---hhcHHHHHHH
Confidence 221 1222334577899999997766554 3566777643
No 132
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.96 E-value=3.2e-29 Score=275.65 Aligned_cols=199 Identities=34% Similarity=0.507 Sum_probs=169.5
Q ss_pred cccCCHHHHHHHhcCCCcc------ceeeeeceEEEEEEEeCCCeEEEEEEeecc----cchhhhhHHHHHHHhhhcCCc
Q 036229 767 CRRFSYLELCRATNRFSEN------NLIGRGGFGSVYKARIGEGMEVAVKVFDLQ----CGRAFKSFDVECEMMKSIRHR 836 (982)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~ 836 (982)
...|++.++..++++|... +.||+|+||.||+|+. +++.||+|++... .....+.+.+|++++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999877 9999999999999987 6889999998643 233457789999999999999
Q ss_pred cceeEEeeecCCCeeEEEEEeccCCChHHHHhcC--CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc
Q 036229 837 NLIKVISSCSTEEFKALILEYMPHGSLEKSLYSS--NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD 914 (982)
Q Consensus 837 nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~--~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~ 914 (982)
||+++++++.+.+..++||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998743 345899999999999999999999 99999999999999999
Q ss_pred CCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 915 DNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 915 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+++.+||+|||++................||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~---~~~Dv~slG~ 222 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-IT---PKSDIYSFGV 222 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTE-EC---THHHHHHHHH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCC-CC---ccchhHHHHH
Confidence 9999999999999876544333334456799999999998764 22 3456666664
No 133
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.96 E-value=7.4e-30 Score=282.51 Aligned_cols=195 Identities=25% Similarity=0.314 Sum_probs=157.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC----eeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE----FKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~l 853 (982)
..++|++.+.||+|+||.||+|++. ++.||||+++... .......+|+.++++++||||+++++++.... ..++
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3568999999999999999999874 7999999997543 33445667999999999999999999987644 4699
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC----------CeEEcCCCCCCEEEcCCCcEEEEe
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA----------PVIHCDLKPSNVLLDDNMVAHLSD 923 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~----------~ivHrDlkp~NILl~~~~~~kL~D 923 (982)
||||+++|+|.+++.... +++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 999999999999997643 899999999999999999999 88 999999999999999999999999
Q ss_pred ecCceeecCCCCceeecccccccccccCceeeeeee--eeEEeeEeeeeee--eeecccC
Q 036229 924 FGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYI--LFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 924 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~~~d~~~~~--~~l~~~~ 979 (982)
||+|+.+.............||+.|+|||++.+... ...+..+|+|++| ++.+.+|
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg 234 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhC
Confidence 999988755444444455689999999999865311 1111234556665 4444443
No 134
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-29 Score=287.40 Aligned_cols=191 Identities=28% Similarity=0.423 Sum_probs=161.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEe--------CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhc-CCccceeEEeeecC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI--------GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSI-RHRNLIKVISSCST 847 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 847 (982)
..++|.+.+.||+|+||.||+|+. ..+..||||+++... .....++.+|+++++++ +||||+++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 356899999999999999999985 224689999997543 34457789999999999 99999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCC---------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSN---------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NIL 912 (982)
++..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEE
Confidence 999999999999999999998653 35899999999999999999999 999999999999999
Q ss_pred EcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 913 LDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 913 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
+++++.+||+|||+|+...............+|+.|+|||++.+..++.. +|+|++|++
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~i 282 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ---SDVWSFGVL 282 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHH---HHHHHHHHH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCch---hHHHHHHHH
Confidence 99999999999999987644433334455668899999999977665543 556666643
No 135
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.5e-29 Score=271.21 Aligned_cols=250 Identities=25% Similarity=0.231 Sum_probs=219.6
Q ss_pred cEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCC
Q 036229 453 EYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGN 532 (982)
Q Consensus 453 ~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 532 (982)
+.++.+++.++.. |..+ .++|+.|++++|++++..+..|..+++|++|+|++|++++..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 6788888888854 4433 468999999999999988899999999999999999999888999999999999999999
Q ss_pred c-CCcCCCccccCCCcccccccCCCcccccc-cccccccCceEEecCCCcccCCCccccccccccceeeccccccccccc
Q 036229 533 K-LSGSIPACFSNLASLGTLSLGSNKLTSIP-LTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIP 610 (982)
Q Consensus 533 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~ip-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p 610 (982)
+ ++...|..|.++++|++|++++|+++.++ ..+..+++|++|++++|++++..+..++.+++|+.|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 8 88777999999999999999999999875 456789999999999999998888889999999999999999998888
Q ss_pred ccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCCCCCCCC
Q 036229 611 TVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNF 690 (982)
Q Consensus 611 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~ 690 (982)
..|..+++|++|+|++|++++..|.+|.++++|+.|+|++|++++..|..+..+++|++|++++|++.+.++....+..+
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l 250 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWL 250 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHH
Confidence 88999999999999999999998999999999999999999999877777999999999999999999887754211112
Q ss_pred CCcccccCcccCCCC
Q 036229 691 SAKSFEGNELLCGSP 705 (982)
Q Consensus 691 ~~~~~~gn~~lc~~~ 705 (982)
.......+...|..|
T Consensus 251 ~~~~~~~~~~~c~~p 265 (285)
T 1ozn_A 251 QKFRGSSSEVPCSLP 265 (285)
T ss_dssp HHCCSEECCCBEEES
T ss_pred HhcccccCccccCCc
Confidence 222344566667665
No 136
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4e-29 Score=297.45 Aligned_cols=293 Identities=24% Similarity=0.290 Sum_probs=222.3
Q ss_pred cccCCCCCCCCCCceeeEEec------CCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccC
Q 036229 57 FLAKNWNTSTPVCNWTGVTCD------VHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYT 130 (982)
Q Consensus 57 ~~~~~w~~~~~~c~w~gv~c~------~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~ 130 (982)
...++|....+||.|.|..|. +....++.|++++++++ .+|..+. ++|+.|+|++|.++ .+|. .+++
T Consensus 10 ~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~ 82 (622)
T 3g06_A 10 AVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPE 82 (622)
T ss_dssp CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTT
T ss_pred HHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCC
Confidence 345678877889999775432 11235889999999998 8888776 79999999999998 6776 5789
Q ss_pred CcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEee
Q 036229 131 LKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLS 210 (982)
Q Consensus 131 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 210 (982)
|++|+|++|+++ .+|. .+++|++|+|++|.++ .+|. .+++|+.|++++|++++ +|.. +++|++|+|+
T Consensus 83 L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 83 LRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp CCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 999999999998 4666 6789999999999998 5665 46889999999999886 5543 4789999999
Q ss_pred ccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCC
Q 036229 211 INNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEI 290 (982)
Q Consensus 211 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 290 (982)
+|++++ +|.. +++|+.|++++|++++ +| ..+++|+.|++++|++++ +|. .+++|+.|++++|.++. +
T Consensus 150 ~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 216 (622)
T 3g06_A 150 DNQLAS-LPAL---PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLTS-L 216 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSS-C
T ss_pred CCcCCC-cCCc---cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCcccc-c
Confidence 999884 4543 4678888999999885 44 456788888888888875 343 24788888888888884 4
Q ss_pred CccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCC
Q 036229 291 PPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNA 370 (982)
Q Consensus 291 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 370 (982)
|.. +++|++|+|++|+|++ +| ..+++|+.|+|++|.|+.... .+++|++|+|++|+|+ .+|..+.++
T Consensus 217 ~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~-----~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 217 PAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM-----LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp CCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC-----CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred CCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc-----ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 432 4678888888888875 44 345778888888888774332 4567788888888887 567777777
Q ss_pred CCCCEEEeccccCccccCCccccCC
Q 036229 371 SKLSVLELGRNSFSGFIPNTFGNLR 395 (982)
Q Consensus 371 ~~L~~L~L~~N~i~~~~~~~~~~l~ 395 (982)
++|+.|+|++|++++..|..+..++
T Consensus 284 ~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 284 SSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cccCEEEecCCCCCCcCHHHHHhcc
Confidence 8888888888888777666655544
No 137
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.96 E-value=1.1e-29 Score=280.34 Aligned_cols=186 Identities=24% Similarity=0.344 Sum_probs=140.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 3568999999999999999999864 58999999997543 233467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCC-----CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 856 EYMPHGSLEKSLYSSN-----YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
||++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 59999887432 35889999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCCceeecccccccccccCceeeee-eeeeEEeeEeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFL 972 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~ 972 (982)
.... .......||+.|+|||++.+. .++. .+|+|++|
T Consensus 159 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG 196 (317)
T 2pmi_A 159 GIPV--NTFSSEVVTLWYRAPDVLMGSRTYST---SIDIWSCG 196 (317)
T ss_dssp TSCC--CCCCCCCSCCTTCCHHHHTTCCCCCT---HHHHHHHH
T ss_pred CCCc--ccCCCCcccccccCchHhhCCCCCCc---HHHHHHHH
Confidence 3222 223356789999999998653 3343 34556555
No 138
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.96 E-value=1.2e-29 Score=293.44 Aligned_cols=185 Identities=25% Similarity=0.365 Sum_probs=157.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|.+.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 468999999999999999999865 69999999997542 23356788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++.+. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|.......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999999754 45899999999999999999999 9999999999999999999999999999999764322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.....+||+.|+|||++.+..+... .+|+|++|
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwSlG 203 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGP--EVDIWSSG 203 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSH--HHHHHHHH
T ss_pred ---cccccCCCcCeEChhhccCCCCCCC--cceehhhH
Confidence 2345679999999999977654322 24455555
No 139
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.96 E-value=9.2e-30 Score=284.70 Aligned_cols=193 Identities=26% Similarity=0.395 Sum_probs=160.6
Q ss_pred HHHHhcCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecC
Q 036229 775 LCRATNRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCST 847 (982)
Q Consensus 775 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 847 (982)
+....++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3345688999999999999999999863 35899999997543 3345788999999999999999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCC-----------------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSN-----------------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHC 904 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHr 904 (982)
++..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 999999999999999999997632 46889999999999999999999 9999999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 905 DLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 905 Dlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.. +|+|++|+
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 264 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE---SDVWAYGV 264 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcc---cccHHHHH
Confidence 9999999999999999999999987643332233345678999999999977665543 55666664
No 140
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.96 E-value=2e-29 Score=282.12 Aligned_cols=192 Identities=24% Similarity=0.391 Sum_probs=159.9
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeecc-cchhhhhHHHHHHHhhhc-CCccceeEEeeecC
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSI-RHRNLIKVISSCST 847 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 847 (982)
+...++|++.+.||+|+||.||+|+. .+++.||+|+++.. .....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34567899999999999999999985 24678999999754 234457889999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCCC----------------------cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcC
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSNY----------------------ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCD 905 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrD 905 (982)
.+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++||+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 9999999999999999999986543 3688999999999999999999 99999999
Q ss_pred CCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 906 LKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 906 lkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|||+||+++.++.+||+|||++................||+.|+|||++.+..++.. +|+|++|+
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 262 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK---SDVWSYGI 262 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChh---HhHHHHHH
Confidence 999999999999999999999987654444444455678899999999977665543 45566663
No 141
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.96 E-value=2e-29 Score=278.13 Aligned_cols=190 Identities=24% Similarity=0.371 Sum_probs=160.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
..++|.+.+.||+|+||.||+|+. .+++.||+|+++... ....+++.+|++++++++||||+++++++.+++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 357899999999999999999975 235889999997543 3445778999999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC-----------------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCC
Q 036229 851 KALILEYMPHGSLEKSLYSSN-----------------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLK 907 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlk 907 (982)
.++||||+++++|.+++.... ..+++.++..++.|++.||+||| ++||+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 999999999999999998643 24789999999999999999999 9999999999
Q ss_pred CCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 908 PSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 908 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.. +|+|++|+
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 240 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQ---SDVWSFGV 240 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHH---HHHHHHHH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCch---hhHHHHHH
Confidence 9999999999999999999997754444334445667899999999977665543 55666664
No 142
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.96 E-value=3.8e-30 Score=279.44 Aligned_cols=189 Identities=22% Similarity=0.367 Sum_probs=158.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
..++|++.+.||+|+||.||+|++.++..||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 4578999999999999999999998899999999975432 346789999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++..... ...
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EYT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH-HHH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccccc-ccc
Confidence 9999999999876667999999999999999999999 999999999999999999999999999999865322 112
Q ss_pred eecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 938 TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
......+|+.|+|||++.+..++.. +|+|++|++
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~~ 210 (283)
T 3gen_A 177 SSVGSKFPVRWSPPEVLMYSKFSSK---SDIWAFGVL 210 (283)
T ss_dssp STTSTTSCGGGCCHHHHHHCCCSHH---HHHHHHHHH
T ss_pred cccCCccCcccCCHHHhccCCCCch---hhHHHHHHH
Confidence 2234557788999999976665543 556666643
No 143
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.96 E-value=8e-30 Score=295.40 Aligned_cols=186 Identities=24% Similarity=0.314 Sum_probs=148.1
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+. .+++.||||+++.. .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46799999999999999999985 45899999999753 233446678899999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYS-APVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
|||+++|+|.+++...+ .+++..+..++.|++.||+||| + +||+||||||+||+++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999987644 5899999999999999999999 8 99999999999999999999999999999854222
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......+||+.|+|||++.+..++.. +|+|++|+
T Consensus 303 --~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 337 (446)
T 4ejn_A 303 --GATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLGV 337 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTH---HHHHHHHH
T ss_pred --CcccccccCCccccCHhhcCCCCCCCc---cchhhhHH
Confidence 223345789999999999977766544 45566553
No 144
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.3e-29 Score=277.06 Aligned_cols=171 Identities=26% Similarity=0.433 Sum_probs=147.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCC--eeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE--FKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467999999999999999999965 48999999997543 234567789999999999999999999987655 78999
Q ss_pred EEeccCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEEEEeecCce
Q 036229 855 LEYMPHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIAK 928 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~ 928 (982)
|||+++++|.+++..... .+++.++..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999986432 3899999999999999999999 9999999999999999 788899999999999
Q ss_pred eecCCCCceeecccccccccccCceee
Q 036229 929 LLIGEDQSITQTQTLATIGYMAPGLFH 955 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~ 955 (982)
...... ......||+.|+|||++.
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~ 188 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHPDMYE 188 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCHHHHH
T ss_pred ecCCCC---ceeecccCCCccCHHHhh
Confidence 764332 223467999999999985
No 145
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.95 E-value=4.7e-29 Score=270.08 Aligned_cols=188 Identities=24% Similarity=0.379 Sum_probs=142.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346799999999999999999986 468999999997442 2234678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999877677899999999999999999999 999999999999999999999999999999876322
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. .......||+.|+|||++.+..++. .+|+|++|+
T Consensus 166 ~--~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 200 (278)
T 3cok_A 166 H--EKHYTLCGTPNYISPEIATRSAHGL---ESDVWSLGC 200 (278)
T ss_dssp -------------------------------CTHHHHHHH
T ss_pred C--CcceeccCCCCcCCcchhcCCCCCc---hhhHHHHHH
Confidence 2 1223457899999999997765543 355666663
No 146
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.95 E-value=4.6e-30 Score=289.25 Aligned_cols=190 Identities=23% Similarity=0.365 Sum_probs=157.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||.||+|++. +++.||||+++.. ......++.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467899999999999999999842 4778999998644 334456788999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCC------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEEEE
Q 036229 852 ALILEYMPHGSLEKSLYSSN------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLS 922 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kL~ 922 (982)
++||||+++|+|.+++...+ ..+++.++..++.|++.||+||| ++||+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998543 35889999999999999999999 99999999999999999555 59999
Q ss_pred eecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 923 DFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 923 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
|||+|+.+.............||+.|+|||++.+..++.. +|+|++|++
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~i 275 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGVL 275 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcH---HHHHHHHHH
Confidence 9999986533333233345678999999999977666544 556666643
No 147
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.95 E-value=2.3e-29 Score=276.29 Aligned_cols=190 Identities=25% Similarity=0.416 Sum_probs=151.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+.. ..+|+|+++.. .....+.+.+|++++++++||||+++++++.. +..++||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~ 110 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEE
Confidence 4578999999999999999999864 35899988643 33445788999999999999999999998754 4578999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+|+.......
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877778999999999999999999999 99999999999999999999999999999986543233
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
........||+.|+|||++........+..+|+|++|+
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 225 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI 225 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHH
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHH
Confidence 33344567999999999986322222223456666664
No 148
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.95 E-value=9.2e-30 Score=285.99 Aligned_cols=192 Identities=23% Similarity=0.280 Sum_probs=150.8
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 3578999999999999999999965 68999999997543 334678899999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--EEEEeecCceeecCCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV--AHLSDFGIAKLLIGED 934 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~~~~~~ 934 (982)
|+++|+|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+....
T Consensus 97 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~-- 170 (361)
T 3uc3_A 97 YASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL-- 170 (361)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc--
Confidence 999999999987644 4899999999999999999999 999999999999999987665 99999999985322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeecccC
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~~ 979 (982)
........||+.|+|||++.+..+.... +|+|++| ++.+.+|
T Consensus 171 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~--~DiwslG~il~ell~g 214 (361)
T 3uc3_A 171 -HSQPKSTVGTPAYIAPEVLLRQEYDGKI--ADVWSCGVTLYVMLVG 214 (361)
T ss_dssp -----------CTTSCHHHHHCSSCCHHH--HHHHHHHHHHHHHHHS
T ss_pred -cCCCCCCcCCCCcCChhhhcCCCCCCCe--eeeehhHHHHHHHHhC
Confidence 1223446799999999999766554332 3445555 4444443
No 149
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.95 E-value=1.8e-29 Score=280.64 Aligned_cols=185 Identities=22% Similarity=0.256 Sum_probs=157.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++++ +||||+++++++..++..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46899999999999999999985 569999999987543 245788999999999 99999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-----EEEEeecCceeec
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV-----AHLSDFGIAKLLI 931 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kL~DFGla~~~~ 931 (982)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999876667999999999999999999999 999999999999999998887 9999999999764
Q ss_pred CCCCce-----eecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 932 GEDQSI-----TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 932 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
...... ......||+.|+|||++.+..++.. +|+|++|
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG 204 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRR---DDLEALG 204 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCch---hHHHHHH
Confidence 432211 1245679999999999987766544 3445555
No 150
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.95 E-value=9.9e-30 Score=280.01 Aligned_cols=184 Identities=22% Similarity=0.229 Sum_probs=151.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.++||+|+||+||+|+.. +++.||||++.... .....+...|+..+.++ +||||+++++++.+++..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 367999999999999999999975 69999999986432 23334455566665555 999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+ +++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~- 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA- 210 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC-
Confidence 9999 67999998877777999999999999999999999 999999999999999999999999999999876322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 211 --~~~~~~~gt~~y~aPE~~~~~-~~---~~~DiwslG~ 243 (311)
T 3p1a_A 211 --GAGEVQEGDPRYMAPELLQGS-YG---TAADVFSLGL 243 (311)
T ss_dssp ------CCCCCGGGCCGGGGGTC-CS---THHHHHHHHH
T ss_pred --CCCcccCCCccccCHhHhcCC-CC---chhhHHHHHH
Confidence 223445699999999998763 33 3456666664
No 151
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.95 E-value=8e-30 Score=280.88 Aligned_cols=188 Identities=21% Similarity=0.370 Sum_probs=149.0
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCe----
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF---- 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 850 (982)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999996 569999999997542 2334678899999999999999999999876543
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||+++++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999997654 5899999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 207 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDAR---SDVYSLGC 207 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHH---HHHHHHHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCch---HhHHHHHH
Confidence 433222 22234579999999999977665543 55666663
No 152
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.95 E-value=1.8e-29 Score=293.86 Aligned_cols=191 Identities=23% Similarity=0.304 Sum_probs=142.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecC-----CCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCST-----EEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~ 850 (982)
.++|++.+.||+|+||+||+|+.. +++.||||++... .....+++.+|+++++.++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 468999999999999999999854 6899999998643 33445778899999999999999999999843 357
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||+ +++|.+++... ..+++..+..++.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 56999988754 45899999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCCc-------------------------eeecccccccccccCcee-eeeeeeeEEeeEeeeeee--eeecc
Q 036229 931 IGEDQS-------------------------ITQTQTLATIGYMAPGLF-HVKYILFVVNFLTSYSFL--MIFIG 977 (982)
Q Consensus 931 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~~~~d~~~~~--~~l~~ 977 (982)
...... ...+..+||++|+|||++ .+..++.. +|+|++| ++.+.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~---~DiwSlG~il~ell 278 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEA---IDVWSIGCIFAELL 278 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTH---HHHHHHHHHHHHHH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcH---hHHHHHHHHHHHHH
Confidence 422111 123456789999999986 44445543 3445555 44444
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.95 E-value=4.8e-29 Score=276.12 Aligned_cols=177 Identities=22% Similarity=0.288 Sum_probs=133.7
Q ss_pred cceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEEEEeccCCC
Q 036229 785 NNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALILEYMPHGS 862 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~E~~~~gs 862 (982)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+++++.+. ||||+++++++.+++..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 488999999999999864 5899999999743 3467788999999997 9999999999999999999999999999
Q ss_pred hHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEEEEeecCceeecCCCCceee
Q 036229 863 LEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAHLSDFGIAKLLIGEDQSITQ 939 (982)
Q Consensus 863 L~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~ 939 (982)
|.+++... ..+++.++..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+++..... ....
T Consensus 93 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~~ 166 (325)
T 3kn6_A 93 LFERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPL 166 (325)
T ss_dssp HHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCC--CCcc
Confidence 99999765 45899999999999999999999 99999999999999998665 8999999999865332 2223
Q ss_pred cccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 940 TQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
....||+.|+|||++.+..++.. +|+|++|+
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~ 197 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDES---CDLWSLGV 197 (325)
T ss_dssp -----------------CCCCHH---HHHHHHHH
T ss_pred cccCCCcCccCHHHhcCCCCCCc---cchHHHHH
Confidence 45678999999999987766544 45566663
No 154
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.95 E-value=4.7e-29 Score=277.70 Aligned_cols=191 Identities=27% Similarity=0.434 Sum_probs=159.5
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC--------CCeEEEEEEeeccc-chhhhhHHHHHHHhhhc-CCccceeEEeeecC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG--------EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSI-RHRNLIKVISSCST 847 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 847 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+++.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3578999999999999999999852 46789999997543 34457789999999999 89999999999999
Q ss_pred CCeeEEEEEeccCCChHHHHhcCC---------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSN---------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NIL 912 (982)
++..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence 999999999999999999997643 23789999999999999999999 999999999999999
Q ss_pred EcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 913 LDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 913 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
++.++.+||+|||+++...............+|+.|+|||++.+..++.. +|+|++|++
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 248 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVL 248 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHH---HHHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChH---HHHHHHHHH
Confidence 99999999999999997654433333445567889999999977655533 556666643
No 155
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.95 E-value=3.8e-29 Score=288.15 Aligned_cols=187 Identities=23% Similarity=0.318 Sum_probs=151.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCC-----Ce
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE-----EF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 850 (982)
.++|++.+.||+|+||.||+|+.. +++.||||+++.. .....+++.+|++++++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 578999999999999999999864 5899999999753 334457889999999999999999999999766 57
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||++ ++|.+++... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999998754 45899999999999999999999 999999999999999999999999999999976
Q ss_pred cCCCCc--------------------eeecccccccccccCcee-eeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQS--------------------ITQTQTLATIGYMAPGLF-HVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~~~~d~~~~~~ 973 (982)
...... ...+..+||++|+|||++ ....++.. +|+|++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~---~DiwSlG~ 240 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKS---IDIWSTGC 240 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTH---HHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcc---cccchHHH
Confidence 433211 123567899999999986 44445433 44555553
No 156
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.95 E-value=4.6e-29 Score=273.68 Aligned_cols=189 Identities=24% Similarity=0.432 Sum_probs=157.1
Q ss_pred hcCCCccceeeeeceEEEEEEEe-----CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCC--Ce
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-----GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE--EF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~ 850 (982)
.++|++.+.||+|+||.||+|++ .+++.||+|+++... ....+.+.+|++++++++||||+++++++..+ ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35689999999999999999983 358999999997442 33457789999999999999999999999776 66
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.++||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 89999999999999999776667999999999999999999999 999999999999999999999999999999977
Q ss_pred cCCCCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...... .......||..|+|||++.+..++.. +|+|++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 217 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIA---SDVWSFGV 217 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHH---HHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcc---hhHHHHHH
Confidence 543322 22345668889999999977665543 45566663
No 157
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.95 E-value=5.6e-29 Score=283.29 Aligned_cols=190 Identities=17% Similarity=0.224 Sum_probs=158.8
Q ss_pred HhcCCCccceeeee--ceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRG--GFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+| +||.||+|+.. +++.||||+++... ....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35689999999999 99999999965 69999999997543 344567888999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 853 LILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
+||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999999999764 345899999999999999999999 9999999999999999999999999999987653
Q ss_pred CCCCc-----eeecccccccccccCceeee--eeeeeEEeeEeeeeeee
Q 036229 932 GEDQS-----ITQTQTLATIGYMAPGLFHV--KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~d~~~~~~ 973 (982)
..... .......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 180 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~---~~DiwslG~ 225 (389)
T 3gni_B 180 SHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDA---KSDIYSVGI 225 (389)
T ss_dssp ETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCT---HHHHHHHHH
T ss_pred cccccccccccccccccccccccCHHHHhccCCCCCc---HhHHHHHHH
Confidence 22211 11233578999999999976 34443 345566663
No 158
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.95 E-value=3.1e-29 Score=276.48 Aligned_cols=190 Identities=25% Similarity=0.391 Sum_probs=161.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeecccc-hhhhhHHHHHHHhhhc-CCccceeEEeeecCCC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQCG-RAFKSFDVECEMMKSI-RHRNLIKVISSCSTEE 849 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 849 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|+++.... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 457899999999999999999974 3478999999975432 3457889999999999 9999999999999999
Q ss_pred eeEEEEEeccCCChHHHHhcCCC-----------------cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 036229 850 FKALILEYMPHGSLEKSLYSSNY-----------------ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NIL 912 (982)
..++||||+++|+|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEE
Confidence 99999999999999999986542 3889999999999999999999 999999999999999
Q ss_pred EcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 913 LDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 913 l~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
++.++.+||+|||++................+|+.|+|||++.+..++.. +|+|++|+
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 235 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFE---SDVWSYGI 235 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChH---HHHHHHHH
Confidence 99999999999999987654444334445668889999999977655533 55666664
No 159
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.95 E-value=3e-29 Score=280.57 Aligned_cols=184 Identities=22% Similarity=0.325 Sum_probs=141.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 4578999999999999999999975 58899999997543 34678889999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCceeecCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~ 933 (982)
|+++|+|.+++... ..+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999998764 35899999999999999999999 999999999999999975 889999999999865322
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+..++.. +|+|++|+
T Consensus 205 ---~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 238 (349)
T 2w4o_A 205 ---VLMKTVCGTPGYCAPEILRGCAYGPE---VDMWSVGI 238 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTH---HHHHHHHH
T ss_pred ---cccccccCCCCccCHHHhcCCCCCcc---cchHHHHH
Confidence 22235679999999999977655543 55666663
No 160
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.95 E-value=5.1e-29 Score=276.57 Aligned_cols=189 Identities=25% Similarity=0.360 Sum_probs=160.7
Q ss_pred hcCCCccceeeeeceEEEEEEEe-----CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeec--CCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-----GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCS--TEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 851 (982)
.++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. ..+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46799999999999999999984 358999999998766666778999999999999999999999875 45678
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||+++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999876667899999999999999999999 9999999999999999999999999999999764
Q ss_pred CCCCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 218 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ---SDVWSFGV 218 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHH---HHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChH---HhHHHHHH
Confidence 33322 22344568889999999977665543 55566663
No 161
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.95 E-value=2e-29 Score=279.72 Aligned_cols=188 Identities=27% Similarity=0.376 Sum_probs=150.8
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCe----EEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGM----EVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.++|+..+.||+|+||.||+|++. +++ +||+|.++.. .....+++.+|++++++++||||+++++++...+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467999999999999999999853 344 4688877543 2345578899999999999999999999998765 77
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+|+||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 99999999999999999999999999999987754
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...........+|+.|+|||++.+..++.. +|+|++|+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 207 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGV 207 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred CcccccccCCCccccccChHHhccCCCCch---hhhhhhHH
Confidence 444344445567889999999987766544 55666664
No 162
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.95 E-value=2.3e-29 Score=278.88 Aligned_cols=191 Identities=26% Similarity=0.436 Sum_probs=142.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCC-C---eEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGE-G---MEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
..++|++.+.||+|+||.||+|+... + ..||||+++.. .....+++.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45689999999999999999998643 3 27999998754 344567899999999999999999999999877655
Q ss_pred ------EEEEEeccCCChHHHHhcCC-----CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEE
Q 036229 852 ------ALILEYMPHGSLEKSLYSSN-----YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 920 (982)
Q Consensus 852 ------~lv~E~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 920 (982)
++||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||++++++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999986432 25889999999999999999999 99999999999999999999999
Q ss_pred EEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 921 LSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 921 L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
|+|||+|+...............+++.|+|||++.+..++.. +|+|++|++
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 228 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVH---SDVWAFGVT 228 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCc---cchhhHHHH
Confidence 999999987644433333345567889999999977765544 556666643
No 163
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.95 E-value=3.3e-29 Score=279.81 Aligned_cols=182 Identities=27% Similarity=0.357 Sum_probs=154.4
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588999999999999999985 569999999997542 23346788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||++ |++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 99997 5888888766667899999999999999999999 99999999999999999999999999999986522
Q ss_pred CceeecccccccccccCceee---eeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFH---VKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~~~~d~~~~~~ 973 (982)
.....||+.|+|||++. ...++ ..+|+|++|+
T Consensus 207 ----~~~~~gt~~y~aPE~~~~~~~~~~~---~~~DiwslG~ 241 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAPEVILAMDEGQYD---GKVDVWSLGI 241 (348)
T ss_dssp ----BCCCCSCGGGCCHHHHHTTSSCCBC---THHHHHHHHH
T ss_pred ----CCcccCCcceeCHhhhccccCCCCC---cHHHHHHHHH
Confidence 23457999999999984 33333 3456666664
No 164
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.95 E-value=2.6e-29 Score=277.51 Aligned_cols=199 Identities=23% Similarity=0.372 Sum_probs=165.1
Q ss_pred cCCHHHHHHHhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeecccc-hhhhhHHHHHHHhhhc-CCcccee
Q 036229 769 RFSYLELCRATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQCG-RAFKSFDVECEMMKSI-RHRNLIK 840 (982)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~ 840 (982)
.+...++....++|++.+.||+|+||.||+|++ .+++.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 345566666788999999999999999999974 3478999999975432 3456789999999999 7999999
Q ss_pred EEeeecCCC-eeEEEEEeccCCChHHHHhcCCCc---------------CCHHHHHHHHHHHHHHHHHHHccCCCCeEEc
Q 036229 841 VISSCSTEE-FKALILEYMPHGSLEKSLYSSNYI---------------LDIFQRLNIMVDVATTLEYLHFGYSAPVIHC 904 (982)
Q Consensus 841 l~~~~~~~~-~~~lv~E~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHr 904 (982)
+++++..++ ..++||||+++|+|.+++...... +++..+..++.|++.||.||| ++||+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999987654 589999999999999999865432 789999999999999999999 9999999
Q ss_pred CCCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 905 DLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 905 Dlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||||+||+++.++.+||+|||+++...............||+.|+|||++.+..++.. +|+|++|+
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 238 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGV 238 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccch---hHHHHHHH
Confidence 9999999999999999999999987654444444456678999999999977665543 55666664
No 165
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-27 Score=282.37 Aligned_cols=208 Identities=26% Similarity=0.286 Sum_probs=119.7
Q ss_pred ccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeE
Q 036229 424 KSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGL 503 (982)
Q Consensus 424 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 503 (982)
++|++|+|++|++++++. ...+|++|++++|++++ +|.. +++|+.|++++|++++. |. .+++|+.|
T Consensus 101 ~~L~~L~Ls~N~l~~l~~------~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L 166 (622)
T 3g06_A 101 PGLLELSIFSNPLTHLPA------LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL-PA---LPSELCKL 166 (622)
T ss_dssp TTCCEEEECSCCCCCCCC------CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEE
T ss_pred CCCCEEECcCCcCCCCCC------CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEE
Confidence 445555555555544332 12344555555555544 2222 25666666666666643 32 23566667
Q ss_pred EeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccC
Q 036229 504 HLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTG 583 (982)
Q Consensus 504 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~ 583 (982)
++++|+|++ +| ..+++|+.|++++|+|++ +|.. +++|+.|++++|.++.+|.. +++|++|++++|.+++
T Consensus 167 ~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~ 235 (622)
T 3g06_A 167 WAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS 235 (622)
T ss_dssp ECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC
T ss_pred ECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc
Confidence 777777764 34 335666777777777664 3332 35666677777777766643 3556666666666664
Q ss_pred CCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccc
Q 036229 584 PLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEK 663 (982)
Q Consensus 584 ~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 663 (982)
+| ..+++|+.|++++|+|++ +|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|++++.+|..+..
T Consensus 236 -lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~ 306 (622)
T 3g06_A 236 -LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 306 (622)
T ss_dssp -CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHH
T ss_pred -CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHh
Confidence 33 334556666666666654 333 4566666667666666 55666666666667777777666666665554
Q ss_pred cc
Q 036229 664 LS 665 (982)
Q Consensus 664 l~ 665 (982)
++
T Consensus 307 L~ 308 (622)
T 3g06_A 307 IT 308 (622)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 166
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.95 E-value=1.9e-29 Score=279.77 Aligned_cols=188 Identities=24% Similarity=0.380 Sum_probs=153.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCe----EEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGM----EVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.++|++.+.||+|+||.||+|++. +++ +||+|++... .......+.+|+.++++++||||+++++++. ++..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357899999999999999999853 344 3788877533 2334567788999999999999999999986 45688
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.+..
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999876667899999999999999999999 99999999999999999999999999999998755
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...........||+.|+|||++.+..++.. +|+|++|+
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 205 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQ---SDVWSYGV 205 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred ccccccccCCCCcccccChHHhccCCCChh---hHhHHhHH
Confidence 444444455678889999999977666544 45566664
No 167
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.95 E-value=1.4e-29 Score=280.43 Aligned_cols=196 Identities=20% Similarity=0.333 Sum_probs=161.9
Q ss_pred HHHHHHhcCCCccceeeeeceEEEEEEEeC------CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeee
Q 036229 773 LELCRATNRFSENNLIGRGGFGSVYKARIG------EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSC 845 (982)
Q Consensus 773 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 845 (982)
.++....++|++.+.||+|+||.||+|+.. +++.||+|++.... .....++.+|+++++.++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344456788999999999999999999753 37889999997543 23456788999999999999999999999
Q ss_pred cCCCeeEEEEEeccCCChHHHHhcCC---------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC
Q 036229 846 STEEFKALILEYMPHGSLEKSLYSSN---------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN 916 (982)
Q Consensus 846 ~~~~~~~lv~E~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~ 916 (982)
.+.+..++||||+++|+|.+++...+ ..+++..+..++.|++.||+||| ++||+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999987532 34688999999999999999999 9999999999999999999
Q ss_pred CcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 917 MVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 917 ~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
+.+||+|||+++...............+|+.|+|||++.+..++.. +|+|++|++
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 229 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTY---SDVWSFGVV 229 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCch---hhHHHHHHH
Confidence 9999999999987643333333344567899999999977665543 556666643
No 168
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.95 E-value=2.2e-29 Score=279.98 Aligned_cols=187 Identities=24% Similarity=0.318 Sum_probs=156.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc--------chhhhhHHHHHHHhhhcCCccceeEEeeecCC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC--------GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE 848 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 848 (982)
..++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 457899999999999999999985 468999999997542 12345678899999999999999999999999
Q ss_pred CeeEEEEEeccCC-ChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 849 EFKALILEYMPHG-SLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 849 ~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887644 5899999999999999999999 999999999999999999999999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+...... ......||+.|+|||++.+..+... .+|+|++|+
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG~ 218 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGP--ELEMWSLGV 218 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSH--HHHHHHHHH
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCC--cccchhHHH
Confidence 8764332 2234679999999999976654222 244555553
No 169
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.95 E-value=2.6e-29 Score=273.69 Aligned_cols=188 Identities=24% Similarity=0.368 Sum_probs=158.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeCC-C-------eEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGE-G-------MEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
.++|++.+.||+|+||.||+|+... + +.||+|+++.......+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4679999999999999999998532 3 5799999987666667889999999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--------EEEE
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV--------AHLS 922 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~kL~ 922 (982)
.++||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999877666899999999999999999999 999999999999999988876 9999
Q ss_pred eecCceeecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeee--eeeccc
Q 036229 923 DFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFL--MIFIGR 978 (982)
Q Consensus 923 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~--~~l~~~ 978 (982)
|||.+.... ......||+.|+|||++.+ ..++. .+|+|++| ++.+.+
T Consensus 164 Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~---~~DiwslG~il~el~~ 213 (289)
T 4fvq_A 164 DPGISITVL------PKDILQERIPWVPPECIENPKNLNL---ATDKWSFGTTLWEICS 213 (289)
T ss_dssp CCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCH---HHHHHHHHHHHHHHHT
T ss_pred cCccccccc------CccccCCcCcccCHHHhCCCCCCCc---hhHHHHHHHHHHHHHc
Confidence 999987541 1123568899999999976 44443 34556665 444444
No 170
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.95 E-value=3.4e-29 Score=272.76 Aligned_cols=190 Identities=25% Similarity=0.391 Sum_probs=143.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+.. ..||+|+++.. .....+.+.+|++++++++||||+++++++ ..+..++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 4678999999999999999999864 35999998654 234457789999999999999999999966 455689999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++++|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccc
Confidence 999999999999877777999999999999999999999 99999999999999999999999999999986543333
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
........||+.|+|||++........+..+|+|++|+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 213 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI 213 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHH
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHH
Confidence 33334567999999999986332222223456666664
No 171
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.95 E-value=1.6e-28 Score=266.71 Aligned_cols=185 Identities=21% Similarity=0.405 Sum_probs=157.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 578999999999999999999864 58999999997542 334567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecCceeecC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFGIAKLLIG 932 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~~ 932 (982)
||+++++|.+.+.... .+++..+..++.|++.|++||| ++||+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999988887653 5899999999999999999999 999999999999999986654 99999999987633
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 161 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 195 (284)
T 3kk8_A 161 S---EAWHGFAGTPGYLSPEVLKKDPYSKP---VDIWACGV 195 (284)
T ss_dssp S---CBCCCSCSCGGGCCHHHHTTCCBCTH---HHHHHHHH
T ss_pred C---ccccCCCCCcCCcCchhhcCCCCCcc---cchHHHHH
Confidence 2 22234679999999999977665543 55666663
No 172
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.95 E-value=8.9e-29 Score=267.73 Aligned_cols=185 Identities=25% Similarity=0.317 Sum_probs=159.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 3567999999999999999999865 478999999987655667889999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceeecCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~ 933 (982)
|+++++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 999999999887644 4899999999999999999999 9999999999999999 78889999999999876432
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. ......||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 163 ~---~~~~~~~t~~y~aPE~~~~~-~~---~~~Di~slG~ 195 (277)
T 3f3z_A 163 K---MMRTKVGTPYYVSPQVLEGL-YG---PECDEWSAGV 195 (277)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTC-BC---TTHHHHHHHH
T ss_pred c---chhccCCCCCccChHHhccc-CC---chhhehhHHH
Confidence 2 23346799999999998664 33 3456666663
No 173
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.95 E-value=4.4e-29 Score=268.51 Aligned_cols=187 Identities=26% Similarity=0.380 Sum_probs=160.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEec
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
.++|++.+.||+|+||.||+|+..+++.||+|+++.... ..+++.+|++++++++||||+++++++.+++..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 467899999999999999999988899999999975432 3467899999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCcee
Q 036229 859 PHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSIT 938 (982)
Q Consensus 859 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 938 (982)
++++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+...... ....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc-cccc
Confidence 999999999877677899999999999999999999 999999999999999999999999999999865321 1122
Q ss_pred ecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 939 QTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 939 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.....+++.|+|||++.+..++. .+|+|++|+
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 193 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSS---KSDVWSFGV 193 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCH---HHHHHHHHH
T ss_pred cccccccccccChhhhcCCCccc---hhchhhhHH
Confidence 23456788999999997665553 355666664
No 174
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.95 E-value=5.6e-29 Score=301.09 Aligned_cols=195 Identities=22% Similarity=0.246 Sum_probs=161.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|.+++..+ +||+|+++++++++.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999864 5889999999754 233456778899999987 7999999999999999999
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++...+ .+++..+..|+.||+.||+||| ++|||||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998654 4899999999999999999999 99999999999999999999999999999986432
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeeecccC
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIFIGRG 979 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l~~~~ 979 (982)
.. ......+||+.|||||++.+..++... ++|++|+.++.+.+|
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~-DvwSlGvilyelltG 538 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSV-DWWAFGVLLYEMLAG 538 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHH-HHHHHHHHHHHHHHS
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccc-eEechHHHHHHHHcC
Confidence 22 234567899999999999877776543 333444444444443
No 175
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.95 E-value=4.8e-29 Score=277.61 Aligned_cols=182 Identities=25% Similarity=0.360 Sum_probs=151.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+|++++.++ +||||+++++++.+++..|+||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4567999999999999999999865 58999999997543 2345688888888 7999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCceeec
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN----MVAHLSDFGIAKLLI 931 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~~~ 931 (982)
||+++|+|.+++...+ .+++..+..++.||+.||+||| ++||+||||||+||++.++ +.+||+|||+|+...
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999987644 5899999999999999999999 9999999999999998533 359999999999764
Q ss_pred CCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.... .....+||+.|+|||++.+..++.. +|+|++|
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 207 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAA---CDIWSLG 207 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHH---HHHHHHH
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCc---cCeeeHh
Confidence 3322 2345679999999999977655543 4455555
No 176
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.95 E-value=1.2e-28 Score=272.83 Aligned_cols=185 Identities=23% Similarity=0.339 Sum_probs=157.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccch------hhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGR------AFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++..... ..+.+.+|++++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999865 5899999999754221 356789999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kL~DFGla 927 (982)
++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999754 45889999999999999999999 99999999999999999887 7999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
....... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 206 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLE---ADMWSIGV 206 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTH---HHHHHHHH
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCc---cccHHHHH
Confidence 8764322 2234679999999999977655533 45566663
No 177
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.95 E-value=2.7e-29 Score=278.24 Aligned_cols=185 Identities=23% Similarity=0.350 Sum_probs=148.0
Q ss_pred cCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc-hhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG-RAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
++|++.+.||+|+||.||+|+.. +++.||+|+++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999965 689999999875432 2223556799999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCce
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSI 937 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 937 (982)
++ |+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..... ..
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TK 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--cc
Confidence 97 5999999887777999999999999999999999 999999999999999999999999999999865322 22
Q ss_pred eecccccccccccCceeeee-eeeeEEeeEeeeeeee
Q 036229 938 TQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLM 973 (982)
Q Consensus 938 ~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+. .++.. +|+|++|+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwslG~ 189 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQ---IDMWGVGC 189 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTH---HHHHHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcH---HHHHHHHH
Confidence 23445789999999998653 33433 45566653
No 178
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.95 E-value=3.9e-29 Score=279.35 Aligned_cols=172 Identities=22% Similarity=0.381 Sum_probs=144.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCC--ccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRH--RNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++| |||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4679999999999999999999888999999999754 23445778999999999976 9999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
||| .+++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++ ++.+||+|||+|+......
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5789999998654 5889999999999999999999 99999999999999997 5789999999998765443
Q ss_pred CceeecccccccccccCceeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
.........||+.|+|||++.+
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~ 183 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKD 183 (343)
T ss_dssp --------CCCCSSCCHHHHHH
T ss_pred ccccCCCCcCCcCcCCHHHHhh
Confidence 3333446689999999999854
No 179
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.95 E-value=1.9e-28 Score=268.15 Aligned_cols=186 Identities=16% Similarity=0.151 Sum_probs=158.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|++... ...+.+.+|+++++.+ +|++++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999985 56999999998643 2346788999999999 89999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-----EEEEeecCceeec
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV-----AHLSDFGIAKLLI 931 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~kL~DFGla~~~~ 931 (982)
|+ +++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||+|+...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 99999999877667999999999999999999999 999999999999999987765 9999999999765
Q ss_pred CCCCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 206 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRR---DDLEALGH 206 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChH---HHHHHHHH
Confidence 43221 12345679999999999977665543 55666663
No 180
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.4e-29 Score=279.30 Aligned_cols=189 Identities=27% Similarity=0.382 Sum_probs=150.6
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc-----hhhhhHHHHHHHhhhcCCccceeEEeeecCCC
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG-----RAFKSFDVECEMMKSIRHRNLIKVISSCSTEE 849 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 849 (982)
....++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 345678999999999999999999964 589999999864321 22356889999999999999999999999999
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..++||||+++ ++.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 99999999976 899998877667888999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCCCceeecccccccccccCceeeeee-eeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~ 973 (982)
..... .......||+.|+|||++.+.. ++. .+|+|++|+
T Consensus 162 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 201 (346)
T 1ua2_A 162 FGSPN--RAYTHQVVTRWYRAPELLFGARMYGV---GVDMWAVGC 201 (346)
T ss_dssp TTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCH---HHHHHHHHH
T ss_pred ccCCc--ccCCcccccccccCchHhhCCCCCCc---hhhhHhHHH
Confidence 53222 2234567899999999986542 332 345566663
No 181
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.95 E-value=4.5e-29 Score=270.62 Aligned_cols=188 Identities=24% Similarity=0.351 Sum_probs=146.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|+.. .+..||+|+++.. .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 4578999999999999999999863 2567999998653 2344567899999999999999999999985 45689
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999877767899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. ........+|+.|+|||++.+..++.. +|+|++|+
T Consensus 169 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 205 (281)
T 1mp8_A 169 ST-YYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGV 205 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHH---HHHHHHHH
T ss_pred cc-ccccccCCCcccccChhhcccCCCCCc---cCchHHHH
Confidence 22 122234457889999999976655543 55666664
No 182
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.95 E-value=4.4e-29 Score=277.95 Aligned_cols=194 Identities=24% Similarity=0.351 Sum_probs=161.2
Q ss_pred HHHHhcCCCccceeeeeceEEEEEEEeCC------CeEEEEEEeeccc-chhhhhHHHHHHHhhhc-CCccceeEEeeec
Q 036229 775 LCRATNRFSENNLIGRGGFGSVYKARIGE------GMEVAVKVFDLQC-GRAFKSFDVECEMMKSI-RHRNLIKVISSCS 846 (982)
Q Consensus 775 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 846 (982)
++...++|++.+.||+|+||.||+|+... .+.||+|+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999998532 3579999997543 33457789999999999 8999999999999
Q ss_pred CCCeeEEEEEeccCCChHHHHhcC-------------CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 036229 847 TEEFKALILEYMPHGSLEKSLYSS-------------NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL 913 (982)
Q Consensus 847 ~~~~~~lv~E~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl 913 (982)
.++..++||||+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence 999999999999999999998753 234789999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 914 DDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 914 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
+.++.+||+|||++................+|+.|+|||++.+..++.. +|+|++|++
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 255 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGIL 255 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChH---HHHHHHHHH
Confidence 9999999999999987654444344445668889999999977655533 556666643
No 183
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=6.8e-29 Score=282.38 Aligned_cols=187 Identities=22% Similarity=0.358 Sum_probs=143.5
Q ss_pred HHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcC-CccceeEEeeecCCC--e
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEE--F 850 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~--~ 850 (982)
...++|++.+.||+|+||.||+|+. .+++.||||++... ......++.+|+.+++.+. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3567899999999999999999986 46899999998543 3344567889999999997 999999999986544 7
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||++ ++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 5999988763 4889999999999999999999 999999999999999999999999999999875
Q ss_pred cCCC-------------------CceeecccccccccccCceeee-eeeeeEEeeEeeeeee
Q 036229 931 IGED-------------------QSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFL 972 (982)
Q Consensus 931 ~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~ 972 (982)
.... .....+..+||+.|+|||++.+ ..++.. +|+|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~---~DiwSlG 218 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKG---IDMWSLG 218 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTH---HHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCCh---hhHHHHH
Confidence 3211 1122345689999999999965 344433 4445555
No 184
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.95 E-value=3.9e-29 Score=290.00 Aligned_cols=189 Identities=23% Similarity=0.391 Sum_probs=157.8
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
...++|++.+.||+|+||.||+|++.++..||||+++... ...+++.+|++++++++||||+++++++. .+..++|||
T Consensus 185 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred echHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 3457889999999999999999999889999999997543 34678999999999999999999999986 567899999
Q ss_pred eccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+..... .
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN-E 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-H
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-c
Confidence 999999999997542 35788899999999999999999 999999999999999999999999999999875321 1
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
........+++.|+|||++....++. .+|+|++|++
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~---~~DvwslG~~ 374 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTI---KSDVWSFGIL 374 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCH---HHHHHHHHHH
T ss_pred eeccCCCcccccccCHHHhccCCCCc---HHHHHhHHHH
Confidence 11123345678999999997665553 3566777643
No 185
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.95 E-value=6.9e-29 Score=268.29 Aligned_cols=185 Identities=20% Similarity=0.362 Sum_probs=135.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999985 46899999998654 223356788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+ ++++.+++.... .+++.++..++.|++.|++||| ++||+||||||+||++++++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 678888886643 5899999999999999999999 9999999999999999999999999999998653222
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..+. +..+|+|++|+
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~--~~~~Di~slG~ 200 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGV 200 (275)
T ss_dssp -----------CTTCCHHHHCC-------THHHHHHHHH
T ss_pred ---cccCCCCCcCcCCceeeeCCCCC--CcccchHHHHH
Confidence 22345699999999999766442 22345566663
No 186
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.95 E-value=8.3e-29 Score=267.75 Aligned_cols=190 Identities=23% Similarity=0.321 Sum_probs=159.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 3467999999999999999999865 68999999997543 344578899999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+........
T Consensus 85 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp ECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999988653 45899999999999999999999 99999999999999999999999999999987643332
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
........||+.|+|||++.+..+.. ..+|+|++|+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~--~~~Di~slG~ 196 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHA--EPVDVWSCGI 196 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCH--HHHHHHHHHH
T ss_pred hhcccCCccccCccChHHHhcCCCCC--CcchHHHHHH
Confidence 23334567999999999997654322 2245566653
No 187
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=277.52 Aligned_cols=267 Identities=16% Similarity=0.132 Sum_probs=149.7
Q ss_pred cEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEE
Q 036229 350 EELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYI 429 (982)
Q Consensus 350 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L 429 (982)
+..+++.+.+....+..+..+++|++|++++|++++..|..|..+++|+.|++++|.++... .|..+++|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~~L 85 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTL 85 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCCEE
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCCEE
Confidence 44455555554444444444455556666666555555555555555555555555554321 14455555566
Q ss_pred EccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccC
Q 036229 430 GLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNK 509 (982)
Q Consensus 430 ~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 509 (982)
++++|+++++. ..++|+.|++++|++++..+.. +++|++|++++|+
T Consensus 86 ~Ls~n~l~~l~-------------------------------~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~ 131 (317)
T 3o53_A 86 DLNNNYVQELL-------------------------------VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNK 131 (317)
T ss_dssp ECCSSEEEEEE-------------------------------ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSC
T ss_pred ECcCCcccccc-------------------------------CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCC
Confidence 66665443221 1134444444444444333322 3445555555555
Q ss_pred CCCCCCcccCCCccccEEEccCCcCCcCCCccc-cCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccc
Q 036229 510 LEGPIPDDICRLTKLYELGLSGNKLSGSIPACF-SNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLD 588 (982)
Q Consensus 510 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~ 588 (982)
+++..+..+..+++|++|+|++|+|++..|..+ ..+++|++|+|++|+++.+|... .+++|++|++++|++++. |..
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l-~~~ 209 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFM-GPE 209 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEE-CGG
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcc-hhh
Confidence 555444455555555555555555555444444 24555666666666665554332 255566666666666543 333
Q ss_pred cccccccceeecccccccccccccccCccCcceEeccccccc-CCccccccCCCCCCeeeCC-CCcCCCCCCcc
Q 036229 589 IGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQ-GSISESFGDLISLKSLNLS-NNNLSRSIPIS 660 (982)
Q Consensus 589 ~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls-~N~l~~~~p~~ 660 (982)
+..+++|+.||+++|++++ +|..+..+++|+.|+|++|+++ +.+|.++..+++|+.|+++ .+.++|..|..
T Consensus 210 ~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 210 FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 6666667777777777764 5666777777777777777777 6677777777777777777 44566655543
No 188
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.95 E-value=6.2e-31 Score=317.42 Aligned_cols=256 Identities=15% Similarity=0.121 Sum_probs=163.1
Q ss_pred CCceeeEEecCCCCcEEEEEeCCCCccccCC-ccccCCCCCCEEEcCCCCcccc---Cc------------chhhhccCC
Q 036229 68 VCNWTGVTCDVHSHRVKVLNISHLNLTGTIP-SQLWNLSSLQSLNLGFNRLSGS---IP------------SAIFTLYTL 131 (982)
Q Consensus 68 ~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~-~~l~~l~~L~~L~L~~n~~~~~---~p------------~~~~~l~~L 131 (982)
|++|.++.. .....++++.+.. ..| ..+..+++|+.|+++++..... .| .....+++|
T Consensus 34 ck~W~~~~~----~~~~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIER----WCRRKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHH----HHCCEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhh----hhceEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 557887721 1233455554332 223 3466788999999998753211 11 123467889
Q ss_pred cEEEccCCcccCccCcccc-CcCCCCccccccC-cccccCchhhhcCCCCCCeeeecceeeecccCCCcc----CcCccc
Q 036229 132 KYVNFRGNQLSGAFPSFIF-NKSSLQHLDFSYN-ALSGEIPANICSNLPFLESISLSQNMFHGRIPSALS----NCKYLE 205 (982)
Q Consensus 132 ~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~ 205 (982)
++|+|++|.+++..+..+. .+++|++|+|++| .++......++.++++|++|+|++|.+++..+.++. .+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999998877777765 6889999999988 555333344546789999999999988865554443 566899
Q ss_pred EEEeeccc--cccc-cccccccccchhhhhccCC-CCCCchhhhcCCCcccceEecccc-------ccCCcCChhhhccC
Q 036229 206 ILSLSINN--LLGA-IPKEIGNLTKLKELYLGYS-GLQGEIPREFGNLAELELMALQVS-------NLQGEIPQELANLT 274 (982)
Q Consensus 206 ~L~Ls~N~--l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~L~~n-------~l~~~~p~~l~~l~ 274 (982)
+|++++|. ++.. ++..+..+++|++|++++| .+++ +|..+..+++|+.|+++.+ .+.+ ++..+.+++
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~ 265 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCK 265 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCT
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCC
Confidence 99998886 2211 1222345688888888887 4443 7777777888888875433 3333 334677777
Q ss_pred CCcEE-EccCCccccCCCccccccCCCcEEEccCccccccCcc-cccCCCCCceeecCCC
Q 036229 275 GLEVL-KLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPA-TIFNMSTLTGLGLQSN 332 (982)
Q Consensus 275 ~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N 332 (982)
+|+.| .+.+... +.++..+..+++|++|+|++|.+++.... .+..+++|+.|++++|
T Consensus 266 ~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 266 ELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp TCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 77777 4443332 23444445667777777777776543222 2345666666666655
No 189
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.95 E-value=1.5e-28 Score=279.85 Aligned_cols=181 Identities=20% Similarity=0.280 Sum_probs=142.7
Q ss_pred hcCCCcc-ceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhh-hcCCccceeEEeeecC----CCee
Q 036229 779 TNRFSEN-NLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMK-SIRHRNLIKVISSCST----EEFK 851 (982)
Q Consensus 779 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~----~~~~ 851 (982)
.++|.+. +.||+|+||+||+|+.. +++.||||+++.. ..+.+|++++. ..+||||+++++++.. .+..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 4567665 78999999999999864 5899999998632 45677888874 4589999999998865 5678
Q ss_pred EEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~DFGla 927 (982)
|+||||+++|+|.+++.... ..+++.++..++.||+.||+||| ++||+||||||+||+++. ++.+||+|||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 99999999999999998653 35899999999999999999999 999999999999999987 789999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+..... ......+||+.|+|||++.+..++.. +|+|++|+
T Consensus 212 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 251 (400)
T 1nxk_A 212 KETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKS---CDMWSLGV 251 (400)
T ss_dssp EECC--------------CTTCCGGGSCCCCSSSH---HHHHHHHH
T ss_pred cccCCC---CccccCCCCCCccCHhhcCCCCCCCc---ccHHHHHH
Confidence 875322 22345679999999999977766644 44555553
No 190
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.95 E-value=9.8e-29 Score=267.70 Aligned_cols=185 Identities=26% Similarity=0.385 Sum_probs=154.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3578999999999999999999864 47899999986432 2234678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++++|.+++.... .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999987653 4889999999999999999999 999999999999999999999999999998754221
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..++. .+|+|++|+
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 195 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDE---KVDLWSLGV 195 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCT---THHHHHHHH
T ss_pred ----cccccCCCCCccCHhHhccCCCCc---cchhHhHHH
Confidence 223467899999999997765553 355666664
No 191
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.95 E-value=1.7e-28 Score=268.96 Aligned_cols=195 Identities=27% Similarity=0.393 Sum_probs=152.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhh--cCCccceeEEeeecC----CCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKS--IRHRNLIKVISSCST----EEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~----~~~~~ 852 (982)
.++|++.+.||+|+||.||+|+. +++.||||++... ....+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56899999999999999999988 6899999998743 33455667777666 799999999998643 35689
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG-----YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
+||||+++|+|.++++.. .+++..+..++.|++.||+|||.. +++||+||||||+||+++.++.+||+|||+|
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999543 589999999999999999999932 2679999999999999999999999999999
Q ss_pred eeecCCCCce--eecccccccccccCceeeeeeee---eEEeeEeeeeee--eeecccC
Q 036229 928 KLLIGEDQSI--TQTQTLATIGYMAPGLFHVKYIL---FVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 928 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~---~~~~~~d~~~~~--~~l~~~~ 979 (982)
+......... ......||+.|+|||++.+.... ..+..+|+|++| ++.+.+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg 219 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence 8765443322 12345799999999999765211 111234556666 4444443
No 192
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.95 E-value=2.1e-28 Score=267.23 Aligned_cols=186 Identities=20% Similarity=0.310 Sum_probs=158.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 468999999999999999999965 48899999987542 33456788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999887543 5899999999999999999999 9999999999999999999999999999998764222
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+..++. .+|+|++|+
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 203 (294)
T 2rku_A 170 --ERKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGC 203 (294)
T ss_dssp --CCBCCCCSCCSSCCHHHHTTSCBCT---HHHHHHHHH
T ss_pred --cccccccCCCCcCCcchhccCCCCc---hhhHHHHHH
Confidence 2233467999999999997765543 355666663
No 193
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.95 E-value=1.8e-28 Score=273.03 Aligned_cols=187 Identities=20% Similarity=0.312 Sum_probs=158.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|.+.+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3468999999999999999999865 4889999998754 23445778899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999887643 5899999999999999999999 999999999999999999999999999999876422
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 229 (335)
T 2owb_A 195 G--ERKKVLCGTPNYIAPEVLSKKGHSFE---VDVWSIGC 229 (335)
T ss_dssp T--CCBCCCCSCCSSCCHHHHHTSCBCTH---HHHHHHHH
T ss_pred c--ccccccCCCccccCHHHhccCCCCch---hhHHHHHH
Confidence 2 22345679999999999977655533 45566663
No 194
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.95 E-value=9.8e-29 Score=273.06 Aligned_cols=193 Identities=23% Similarity=0.288 Sum_probs=157.8
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeec----CCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCS----TEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+++++.++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 356899999999999999999986 569999999997666666788999999999999999999999986 345789
Q ss_pred EEEEeccCCChHHHHhc---CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 853 LILEYMPHGSLEKSLYS---SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
+||||+++|+|.+++.. ....+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 99999999999999875 3456899999999999999999999 99999999999999999999999999999886
Q ss_pred ecCCCCc-------eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQS-------ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
....... .......||+.|+|||++.+......+..+|+|++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~ 234 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGC 234 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHH
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHH
Confidence 4211100 0112345799999999997654433445567777774
No 195
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.7e-28 Score=272.16 Aligned_cols=189 Identities=27% Similarity=0.428 Sum_probs=159.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe-----CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC--ee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-----GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE--FK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~ 851 (982)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46789999999999999999984 358999999998766666788999999999999999999999987654 78
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||+++++|.+++...+..+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887777899999999999999999999 9999999999999999999999999999999764
Q ss_pred CCCCce-eecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQSI-TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...... ......++..|+|||++.+..++. .+|+|++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 236 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSV---ASDVWSFGV 236 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEH---HHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCc---hhhHHHHHH
Confidence 433221 123445778899999997765543 355666664
No 196
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2.1e-29 Score=280.81 Aligned_cols=178 Identities=19% Similarity=0.250 Sum_probs=144.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--------chhhhhHHHHHHHhhhcC---------CccceeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--------GRAFKSFDVECEMMKSIR---------HRNLIKV 841 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~nIv~l 841 (982)
.++|++.+.||+|+||+||+|+. +++.||||+++... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999998 78999999997542 223467889999998886 5555555
Q ss_pred E-----------------eeecC-------------CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHH
Q 036229 842 I-----------------SSCST-------------EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLE 891 (982)
Q Consensus 842 ~-----------------~~~~~-------------~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~ 891 (982)
. +++.+ ++..|+||||+++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 4 44443 6789999999999977666643 45799999999999999999
Q ss_pred HHHccCCCCeEEcCCCCCCEEEcCCC--------------------cEEEEeecCceeecCCCCceeecccccccccccC
Q 036229 892 YLHFGYSAPVIHCDLKPSNVLLDDNM--------------------VAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAP 951 (982)
Q Consensus 892 yLH~~~~~~ivHrDlkp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aP 951 (982)
|||. ++||+||||||+|||++.++ .+||+|||+|+.... ...+||+.||||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 9993 48999999999999999876 999999999997632 234799999999
Q ss_pred ceeeeeeeeeEEeeEeeeeee
Q 036229 952 GLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 952 E~~~~~~~~~~~~~~d~~~~~ 972 (982)
|++.+.. + ..+|+|+++
T Consensus 247 E~~~g~~-~---~~~Diwsl~ 263 (336)
T 2vuw_A 247 DLFTGDG-D---YQFDIYRLM 263 (336)
T ss_dssp GGGCCCS-S---HHHHHHHHH
T ss_pred hhhcCCC-c---cceehhhhh
Confidence 9998765 3 346677764
No 197
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.95 E-value=8.1e-29 Score=267.01 Aligned_cols=184 Identities=22% Similarity=0.373 Sum_probs=156.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCC--CeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE--EFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+++ ++.||+|+++... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 468999999999999999999984 8999999997542 34456789999999999999999999999877 788999
Q ss_pred EEeccCCChHHHHhcCCC-cCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 855 LEYMPHGSLEKSLYSSNY-ILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
|||+++|+|.+++..... .+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+|++|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~- 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF- 163 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT-
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee-
Confidence 999999999999986543 5899999999999999999999 899 999999999999999999999999987642
Q ss_pred CCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..+...+..+|+|++|+
T Consensus 164 ------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~ 199 (271)
T 3kmu_A 164 ------QSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAV 199 (271)
T ss_dssp ------SCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHH
T ss_pred ------cccCccCCccccChhhhccCCCCCCCchhhHHHHHH
Confidence 122456899999999997765544323456666663
No 198
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.95 E-value=7e-29 Score=284.57 Aligned_cols=189 Identities=23% Similarity=0.294 Sum_probs=144.2
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--------chhhhhHHHHHHHhhhcCCccceeEEeeecC
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--------GRAFKSFDVECEMMKSIRHRNLIKVISSCST 847 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 847 (982)
...++|.+.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 35678999999999999999999864 58999999997532 1223468899999999999999999999865
Q ss_pred CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---CcEEEEee
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDF 924 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kL~DF 924 (982)
+..++||||+++|+|.+++... ..+++.++..++.|++.||+||| ++||+||||||+||+++.+ +.+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 4578999999999999988654 45899999999999999999999 9999999999999999754 45999999
Q ss_pred cCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 925 GIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 925 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|+|+.... ........||+.|+|||++.+......+..+|+|++|+
T Consensus 287 G~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~ 332 (419)
T 3i6u_A 287 GHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGV 332 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHH
T ss_pred ccceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHH
Confidence 99987532 22234567999999999985422222223455666663
No 199
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.95 E-value=1.1e-28 Score=271.86 Aligned_cols=186 Identities=25% Similarity=0.315 Sum_probs=149.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 368999999999999999999975 48999999986442 233567889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||++++++.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.|.......
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 999999998887654 45899999999999999999999 9999999999999999999999999999998764322
Q ss_pred ceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 157 -~~~~~~~~~~~y~aPE~~~~~~~~~~---~~Di~slG~ 191 (311)
T 4agu_A 157 -DYYDDEVATRWYRSPELLVGDTQYGP---PVDVWAIGC 191 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCT---HHHHHHHHH
T ss_pred -cccCCCcCCccccChHHHhcCCCCCc---chhhHHHHH
Confidence 22235678999999999865 33333 345566663
No 200
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.95 E-value=1.6e-28 Score=284.43 Aligned_cols=182 Identities=29% Similarity=0.409 Sum_probs=153.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC-eeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE-FKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|++. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 4567889999999999999999984 7899999997543 4578999999999999999999999976654 7899999
Q ss_pred eccCCChHHHHhcCCC-cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSSNY-ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++|+|.+++...+. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999986543 3689999999999999999999 999999999999999999999999999999864211
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.....+++.|+|||++.+..++.. +|+|++|+
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~---sDvwslG~ 374 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGI 374 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHH---HHHHHHHH
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcH---HHHHHHHH
Confidence 122357889999999977665543 55666664
No 201
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.95 E-value=7.4e-29 Score=290.41 Aligned_cols=189 Identities=23% Similarity=0.419 Sum_probs=160.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCC-CeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGE-GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|++.. ++.||||+++... ...+++.+|++++++++||||+++++++..++..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34678899999999999999999764 8999999997543 346789999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..... .
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-T 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-C
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCC-c
Confidence 99999999999864 345899999999999999999999 999999999999999999999999999999976432 2
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
........+++.|+|||++.+..++. .+|+|++|++
T Consensus 373 ~~~~~~~~~~~~y~aPE~~~~~~~~~---~sDvwSlG~~ 408 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAPESLAYNKFSI---KSDVWAFGVL 408 (495)
T ss_dssp EECCTTCCCCGGGCCHHHHHHCEECH---HHHHHHHHHH
T ss_pred eeecCCCcCCcceeCHhHHhcCCCCc---HHhHHhHHHH
Confidence 22233455678999999997765553 3566777643
No 202
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.95 E-value=7e-29 Score=279.50 Aligned_cols=194 Identities=26% Similarity=0.292 Sum_probs=162.4
Q ss_pred cccCCHHHHHHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcC-----Ccccee
Q 036229 767 CRRFSYLELCRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-----HRNLIK 840 (982)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv~ 840 (982)
...+++.+.....++|++.++||+|+||.||+|+. .+++.||||+++.. ......+..|+++++.++ ||||++
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44556666666778999999999999999999986 46899999999743 334566788999999986 999999
Q ss_pred EEeeecCCCeeEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC----
Q 036229 841 VISSCSTEEFKALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---- 915 (982)
Q Consensus 841 l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---- 915 (982)
+++++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 889999998654 35899999999999999999999 999999999999999975
Q ss_pred ---------------------CCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 916 ---------------------NMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 916 ---------------------~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
++.+||+|||+|+..... .....||+.|+|||++.+..++.. +|+|++|+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 247 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVS---SDMWSFGC 247 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTT---HHHHHHHH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCc---cchHHHHH
Confidence 789999999999864221 234679999999999987766544 45566663
No 203
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.95 E-value=9.1e-29 Score=267.93 Aligned_cols=189 Identities=24% Similarity=0.402 Sum_probs=157.6
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
...++|++.+.||+|+||.||+|+..+++.||+|+++... ...+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 87 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE 87 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEe
Confidence 3457899999999999999999998888899999997543 345788999999999999999999999864 45899999
Q ss_pred eccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||.+.......
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE- 163 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-
Confidence 999999999997532 25889999999999999999999 9999999999999999999999999999998764322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
........+++.|+|||++.+..++. .+|+|++|++
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~i 199 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTI---KSDVWSFGIL 199 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECH---HHHHHHHHHH
T ss_pred cccccCCCCccCccChhhhccCCCCc---hhhhHHHHHH
Confidence 22233455788999999997665553 3556666643
No 204
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.9e-29 Score=279.64 Aligned_cols=189 Identities=24% Similarity=0.328 Sum_probs=155.8
Q ss_pred hcCCCccceeeeeceEEEEEEEe----CCCeEEEEEEeeccc----chhhhhHHHHHHHhhhc-CCccceeEEeeecCCC
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI----GEGMEVAVKVFDLQC----GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEE 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 849 (982)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++.+ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999986 368999999986432 23446677899999999 6999999999999999
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..++||||+++|+|.+++.... .+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999997654 5889999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+.... ........||+.|+|||++.+.... .+..+|+|++|+
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~-~~~~~DvwslG~ 250 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGV 250 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCHHHHTTCC----CTHHHHHHHHH
T ss_pred cccCC-CCcccCcccCcCccChhhhcCCCCC-CCchhhHHHHHH
Confidence 53222 1223346799999999999753211 223355666663
No 205
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.95 E-value=2.6e-28 Score=274.78 Aligned_cols=194 Identities=25% Similarity=0.386 Sum_probs=159.8
Q ss_pred HHHHHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc--------hhhhhHHHHHHHhhhc-CCccceeEE
Q 036229 773 LELCRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG--------RAFKSFDVECEMMKSI-RHRNLIKVI 842 (982)
Q Consensus 773 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~nIv~l~ 842 (982)
.......++|++.+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|+++++++ +||||++++
T Consensus 87 ~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 166 (365)
T 2y7j_A 87 AAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLI 166 (365)
T ss_dssp HHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEE
T ss_pred hhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 344555678999999999999999999975 699999999875431 1245678899999999 899999999
Q ss_pred eeecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEE
Q 036229 843 SSCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 922 (982)
Q Consensus 843 ~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~ 922 (982)
+++...+..++||||+++++|.+++... ..+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+
T Consensus 167 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~ 242 (365)
T 2y7j_A 167 DSYESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLS 242 (365)
T ss_dssp EEEEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEE
Confidence 9999999999999999999999999754 35899999999999999999999 9999999999999999999999999
Q ss_pred eecCceeecCCCCceeecccccccccccCceeeeee---eeeEEeeEeeeeeee
Q 036229 923 DFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKY---ILFVVNFLTSYSFLM 973 (982)
Q Consensus 923 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~d~~~~~~ 973 (982)
|||++..+.... ......||+.|+|||++.+.. ....+..+|+|++|+
T Consensus 243 DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~ 293 (365)
T 2y7j_A 243 DFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293 (365)
T ss_dssp CCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHH
T ss_pred ecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHH
Confidence 999998764322 234567999999999986431 111223456666663
No 206
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.2e-28 Score=273.29 Aligned_cols=188 Identities=27% Similarity=0.376 Sum_probs=148.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCe----EEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGM----EVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.++|++.+.||+|+||.||+|++. +++ +||+|.+... .....+.+.+|++++++++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 468999999999999999999853 344 3577776533 3345678899999999999999999999998765 78
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+|+||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...........+|+.|+|||++.+..++.. +|+|++|+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 207 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGV 207 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred ccccccccCCCccccccCHHHHcCCCCChH---HHHHHHHH
Confidence 433333445567889999999987766644 45566664
No 207
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.95 E-value=1.9e-28 Score=266.70 Aligned_cols=185 Identities=20% Similarity=0.332 Sum_probs=153.2
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++.. ......++.+|+..+..+ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4567999999999999999999975 6999999999754 234456788899999999 99999999999999999999
Q ss_pred EEEeccCCChHHHHhcC---CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC--------------
Q 036229 854 ILEYMPHGSLEKSLYSS---NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN-------------- 916 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-------------- 916 (982)
||||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999754 245899999999999999999999 9999999999999999844
Q ss_pred -----CcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 917 -----MVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 917 -----~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..+||+|||.+...... ....||+.|+|||++.+..... ..+|+|++|+
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~--~~~Di~slG~ 219 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHL--PKADIFALAL 219 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTH--HHHHHHHHHH
T ss_pred ccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCC--chhhHHHHHH
Confidence 47999999999875322 2345899999999997652221 2345566553
No 208
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.95 E-value=1.4e-28 Score=279.17 Aligned_cols=172 Identities=21% Similarity=0.374 Sum_probs=145.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcC--CccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIR--HRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++..++..|+|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 3469999999999999999999878999999999754 2345578899999999996 59999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|| +.+++|.+++.... .+++.++..++.||+.||.||| ++||+||||||+||+++ ++.+||+|||+|+.+....
T Consensus 135 ~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 55889999998654 5788899999999999999999 99999999999999995 5899999999998764433
Q ss_pred CceeecccccccccccCceeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
........+||+.|+|||++.+
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~ 230 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKD 230 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHC
T ss_pred ccccCCCCCcCCCccChHHhhh
Confidence 3333345679999999999865
No 209
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=3e-28 Score=265.01 Aligned_cols=188 Identities=22% Similarity=0.359 Sum_probs=155.9
Q ss_pred hcCCCccc-eeeeeceEEEEEEEeC---CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENN-LIGRGGFGSVYKARIG---EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|.+.+ .||+|+||.||+|.+. +++.||+|+++... ....+++.+|++++++++||||+++++++. .+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEE
Confidence 34566665 9999999999999753 58889999997643 345678899999999999999999999994 556899
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++++|.+++......+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999999877677999999999999999999999 999999999999999999999999999999976433
Q ss_pred CCce-eecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSI-TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... ......+|+.|+|||++.+..++.. +|+|++|+
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 201 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGV 201 (287)
T ss_dssp SCEECCCCSSCCCGGGCCHHHHHHCEECHH---HHHHHHHH
T ss_pred cceeeccccccccccccCHHHhccCCCCch---hhHHHHHH
Confidence 3221 2233457899999999976655543 55666664
No 210
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.95 E-value=1.5e-28 Score=276.90 Aligned_cols=194 Identities=23% Similarity=0.264 Sum_probs=153.2
Q ss_pred CCHHHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccc-----------hhhhhHHHHHHHhhhcCCccc
Q 036229 770 FSYLELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCG-----------RAFKSFDVECEMMKSIRHRNL 838 (982)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~nI 838 (982)
....++....++|++.+.||+|+||.||+|+..+++.||||++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677888999999999999999999999988899999999854321 123678999999999999999
Q ss_pred eeEEeeec-----CCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE
Q 036229 839 IKVISSCS-----TEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL 913 (982)
Q Consensus 839 v~l~~~~~-----~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl 913 (982)
+++++++. .....++||||++ |++.+++...+..+++..+..++.|++.||.||| ++||+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 99999983 3447899999997 6898988877777999999999999999999999 9999999999999999
Q ss_pred cCCCcEEEEeecCceeecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 914 DDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 914 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
+.++.+||+|||+++..... .......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 222 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTK---LVDMWSAGC 222 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCT---HHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCc---HhHHHhHHH
Confidence 99999999999999854322 22345678999999999865 33333 345566663
No 211
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.95 E-value=3.4e-28 Score=264.20 Aligned_cols=184 Identities=25% Similarity=0.357 Sum_probs=157.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999865 58899999986432 22346788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++++|.+++...+ .+++..+..++.|++.|++||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999997654 4889999999999999999999 999999999999999999999999999999865321
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......|++.|+|||++.+..++. .+|+|++|+
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 200 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDE---KVDLWCAGV 200 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCT---THHHHHHHH
T ss_pred ---ccccccCCCCcCCHHHhccCCCCc---ccchhhHHH
Confidence 223467999999999997765553 355666663
No 212
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.95 E-value=2e-28 Score=270.45 Aligned_cols=188 Identities=22% Similarity=0.305 Sum_probs=150.4
Q ss_pred hcCCCcc-ceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSEN-NLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++. +.||+|+||.||+|+. .+++.||||+++.......+.+.+|+++++++ +||||+++++++.+++..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4578874 7899999999999985 46899999999866555667899999999985 7999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeecCceeecC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFGIAKLLIG 932 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~~ 932 (982)
||+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999997653 5889999999999999999999 999999999999999987765 99999999986532
Q ss_pred CCC-----ceeecccccccccccCceeee-----eeeeeEEeeEeeeeeee
Q 036229 933 EDQ-----SITQTQTLATIGYMAPGLFHV-----KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~~~d~~~~~~ 973 (982)
... ........||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~---~~DiwslG~ 214 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDK---RCDLWSLGV 214 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTT---THHHHHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCc---ccccHhHHH
Confidence 211 111234569999999999864 33333 345566663
No 213
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.95 E-value=1.4e-28 Score=275.38 Aligned_cols=193 Identities=23% Similarity=0.337 Sum_probs=153.6
Q ss_pred HHHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc-----cchhhhhHHHHHHHhhhcCCccceeEEeeecCC
Q 036229 775 LCRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ-----CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE 848 (982)
Q Consensus 775 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 848 (982)
+....++|++.+.||+|+||.||+|+. .+++.||+|+++.. .....+.+.+|++++++++||||+++++++.++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345667899999999999999999986 45889999998643 234557889999999999999999999999999
Q ss_pred CeeEEEEEeccCCChHHHHhcC---------------------------------------CCcCCHHHHHHHHHHHHHH
Q 036229 849 EFKALILEYMPHGSLEKSLYSS---------------------------------------NYILDIFQRLNIMVDVATT 889 (982)
Q Consensus 849 ~~~~lv~E~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~qi~~~ 889 (982)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988521 1123567788899999999
Q ss_pred HHHHHccCCCCeEEcCCCCCCEEEcCCC--cEEEEeecCceeecCCCC--ceeecccccccccccCceeee--eeeeeEE
Q 036229 890 LEYLHFGYSAPVIHCDLKPSNVLLDDNM--VAHLSDFGIAKLLIGEDQ--SITQTQTLATIGYMAPGLFHV--KYILFVV 963 (982)
Q Consensus 890 L~yLH~~~~~~ivHrDlkp~NILl~~~~--~~kL~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~ 963 (982)
|+||| ++||+||||||+||+++.++ .+||+|||+|+.+..... ........||+.|+|||++.+ ..++.
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~-- 255 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP-- 255 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT--
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc--
Confidence 99999 99999999999999998766 899999999987643221 122345679999999999864 33333
Q ss_pred eeEeeeeeee
Q 036229 964 NFLTSYSFLM 973 (982)
Q Consensus 964 ~~~d~~~~~~ 973 (982)
.+|+|++|+
T Consensus 256 -~~DiwslG~ 264 (345)
T 3hko_A 256 -KCDAWSAGV 264 (345)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 355666664
No 214
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.95 E-value=1.2e-28 Score=267.86 Aligned_cols=185 Identities=26% Similarity=0.384 Sum_probs=151.8
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|.+.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 467999999999999999999864 58999999997553 3345788999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcC---CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceee
Q 036229 857 YMPHGSLEKSLYSS---NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 857 ~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~ 930 (982)
|+++|+|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++...
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988642 356899999999999999999999 9999999999999999 45678999999999865
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... .......||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 178 ~~~---~~~~~~~~t~~y~aPE~~~~~-~~---~~~Di~slG~ 213 (285)
T 3is5_A 178 KSD---EHSTNAAGTALYMAPEVFKRD-VT---FKCDIWSAGV 213 (285)
T ss_dssp ------------CTTGGGCCHHHHTTC-CC---HHHHHHHHHH
T ss_pred CCc---ccCcCcccccCcCChHHhccC-CC---cccCeehHHH
Confidence 332 223456799999999998653 33 3355666664
No 215
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.95 E-value=4e-28 Score=264.09 Aligned_cols=182 Identities=27% Similarity=0.485 Sum_probs=151.9
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccch-------hhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGR-------AFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 47899999999999999999986 46899999998643221 1267889999999999999999999997765
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCc-----EEEEe
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLDDNMV-----AHLSD 923 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~kL~D 923 (982)
++||||+++|+|.+++......+++..+..++.|++.|++||| ++| |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999999877778999999999999999999999 999 999999999999987776 99999
Q ss_pred ecCceeecCCCCceeecccccccccccCceeee--eeeeeEEeeEeeeeeee
Q 036229 924 FGIAKLLIGEDQSITQTQTLATIGYMAPGLFHV--KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 924 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~d~~~~~~ 973 (982)
||+|+.... ......||+.|+|||++.. ..++ ..+|+|++|+
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~---~~~Di~slG~ 216 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYT---EKADTYSFAM 216 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEEC---HHHHHHHHHH
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcC---chhhHHHHHH
Confidence 999985422 2345679999999999843 2333 3355566663
No 216
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.6e-28 Score=270.91 Aligned_cols=257 Identities=21% Similarity=0.222 Sum_probs=153.8
Q ss_pred CEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecc
Q 036229 108 QSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQ 187 (982)
Q Consensus 108 ~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~ 187 (982)
+.++++.+.+....+..+..+++|++|+|++|++++..|..+.++++|++|+|++|.+++..| +..+++|++|+|++
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNN 89 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE---ETTCTTCCEEECCS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh---hhhcCCCCEEECcC
Confidence 344555555543333334455566666666666666555666666666666666666664333 36666777777777
Q ss_pred eeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCC
Q 036229 188 NMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIP 267 (982)
Q Consensus 188 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 267 (982)
|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 7666432 2356777777777766544333 3456666666666666555566666666666666666665555
Q ss_pred hhh-hccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccC
Q 036229 268 QEL-ANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQL 346 (982)
Q Consensus 268 ~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 346 (982)
..+ ..+++|++|+|++|+|++.. ....+++|++|+|++|++++..+ .+..+++|
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L---------------------- 216 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGV---------------------- 216 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTC----------------------
T ss_pred HHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcchh-hhcccCcc----------------------
Confidence 554 35666677777777666542 22236666666666666664332 34444444
Q ss_pred CCccEEEccCCcccccccccccCCCCCCEEEeccccCc-cccCCccccCCccceecccc
Q 036229 347 PNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFS-GFIPNTFGNLRNLRLMTLHY 404 (982)
Q Consensus 347 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L~~ 404 (982)
++|+|++|+++ .+|..+..+++|+.|++++|++. +..+..+..+++|+.+++++
T Consensus 217 ---~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~ 271 (317)
T 3o53_A 217 ---TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (317)
T ss_dssp ---SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHH
T ss_pred ---cEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCC
Confidence 55555555555 34555666667777777777776 55666666677777666663
No 217
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.95 E-value=5.3e-28 Score=267.17 Aligned_cols=189 Identities=25% Similarity=0.401 Sum_probs=154.8
Q ss_pred CCccceeeeeceEEEEEEEe-----CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecC--CCeeEE
Q 036229 782 FSENNLIGRGGFGSVYKARI-----GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCST--EEFKAL 853 (982)
Q Consensus 782 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~l 853 (982)
|++.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48999999999999999864 258999999997553 3446778999999999999999999999976 467899
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++|+|.+++.... +++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 899999999999999999999 999999999999999999999999999999987543
Q ss_pred CCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeee--eeeccc
Q 036229 934 DQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL--MIFIGR 978 (982)
Q Consensus 934 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~--~~l~~~ 978 (982)
... .......+|+.|+|||++.+..++.. +|+|++| ++.+.+
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~ll~ 232 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLYELLT 232 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcH---HHHHHHHHHHHHHHh
Confidence 322 22344568889999999977665533 4555555 444443
No 218
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=4.4e-28 Score=270.33 Aligned_cols=197 Identities=26% Similarity=0.361 Sum_probs=153.0
Q ss_pred HHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhc--CCccceeEEeeecCC---
Q 036229 774 ELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI--RHRNLIKVISSCSTE--- 848 (982)
Q Consensus 774 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~--- 848 (982)
......++|++.+.||+|+||.||+|+.. ++.||||++.... ......|.+++... +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445678999999999999999999984 8999999986432 23445566665554 999999999998776
Q ss_pred -CeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC--------CeEEcCCCCCCEEEcCCCcE
Q 036229 849 -EFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA--------PVIHCDLKPSNVLLDDNMVA 919 (982)
Q Consensus 849 -~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~--------~ivHrDlkp~NILl~~~~~~ 919 (982)
...++||||+++|+|.++++.. .+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 6889999999999999999764 4899999999999999999999 77 99999999999999999999
Q ss_pred EEEeecCceeecCCCCce--eecccccccccccCceeeeeeeeeEE---eeEeeeeee--eeecccC
Q 036229 920 HLSDFGIAKLLIGEDQSI--TQTQTLATIGYMAPGLFHVKYILFVV---NFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~---~~~d~~~~~--~~l~~~~ 979 (982)
||+|||+|+.+....... ......||+.|+|||++.+....... ..+|+|++| ++.+.+|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence 999999998764332211 12345799999999999765443220 013555555 4445544
No 219
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.95 E-value=2.1e-28 Score=263.85 Aligned_cols=182 Identities=27% Similarity=0.438 Sum_probs=143.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc----chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC----GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|+..+.||+|+||.||+|++ .++.||||+++... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 46899999999999999999997 48999999986442 23346788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCC---eEEcCCCCCCEEEcC--------CCcEEEEe
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAP---VIHCDLKPSNVLLDD--------NMVAHLSD 923 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~---ivHrDlkp~NILl~~--------~~~~kL~D 923 (982)
|||+++++|.+++.. ..+++..+..++.|++.|++||| ++| |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999854 35899999999999999999999 888 999999999999985 67899999
Q ss_pred ecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 924 FGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 924 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||.+...... ......||+.|+|||++.+..++.. .|+|++|+
T Consensus 160 fg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 202 (271)
T 3dtc_A 160 FGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKG---SDVWSYGV 202 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHH---HHHHHHHH
T ss_pred CCcccccccc----cccCCCCccceeCHHHhccCCCCch---hhHHHHHH
Confidence 9999865322 1224579999999999977665543 45566663
No 220
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.95 E-value=7.1e-29 Score=275.51 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=146.2
Q ss_pred HHHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 775 LCRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 775 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.....++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 344567899999999999999999985 469999999997543 22345678899999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-----CCCcEEEEeecC
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-----DNMVAHLSDFGI 926 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-----~~~~~kL~DFGl 926 (982)
++||||+++ +|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++ ..+.+||+|||+
T Consensus 109 ~lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 999999974 9999987654 4899999999999999999999 99999999999999994 455699999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeee-eeeEEeeEeeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLM 973 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~ 973 (982)
|+..... ........||+.|+|||++.+.. ++. .+|+|++|+
T Consensus 184 a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 226 (329)
T 3gbz_A 184 ARAFGIP--IRQFTHEIITLWYRPPEILLGSRHYST---SVDIWSIAC 226 (329)
T ss_dssp HHHHC-------------CCTTCCHHHHTTCCCCCT---HHHHHHHHH
T ss_pred ccccCCc--ccccCCCcCCccccCHHHhcCCCCCCc---HHHHHHHHH
Confidence 9875322 22234567899999999996643 343 345566663
No 221
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.95 E-value=1.3e-28 Score=280.59 Aligned_cols=172 Identities=26% Similarity=0.416 Sum_probs=147.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCC--eeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE--FKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999965 48999999997543 234567789999999999999999999987655 77999
Q ss_pred EEeccCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEEEEeecCce
Q 036229 855 LEYMPHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHLSDFGIAK 928 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~ 928 (982)
|||+++|+|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 999999999999975432 3899999999999999999999 9999999999999999 778889999999998
Q ss_pred eecCCCCceeecccccccccccCceeee
Q 036229 929 LLIGEDQSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
..... .......||+.|+|||++.+
T Consensus 165 ~~~~~---~~~~~~~gt~~y~aPE~~~~ 189 (396)
T 4eut_A 165 ELEDD---EQFVSLYGTEEYLHPDMYER 189 (396)
T ss_dssp ECCCG---GGSSCSSSCCTTCCHHHHHH
T ss_pred EccCC---CccccccCCccccCHHHhhc
Confidence 76332 22234679999999999864
No 222
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.95 E-value=1.7e-28 Score=287.48 Aligned_cols=185 Identities=22% Similarity=0.354 Sum_probs=155.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
..++|++.+.||+|+||.||+|+.. +++.||||++... .......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4568999999999999999999865 6899999999643 233457789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc---CCCcEEEEeecCceeec
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD---DNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~---~~~~~kL~DFGla~~~~ 931 (982)
|||+++|+|.+.+.... .+++..+..++.|++.||.||| ++||+||||||+||+++ .++.+||+|||+|+...
T Consensus 100 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 99999999999887654 5899999999999999999999 99999999999999995 45689999999998653
Q ss_pred CCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. .......||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 176 ~~---~~~~~~~gt~~y~aPE~~~~~-~~---~~~DiwslG~ 210 (486)
T 3mwu_A 176 QN---TKMKDRIGTAYYIAPEVLRGT-YD---EKCDVWSAGV 210 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGSC-CC---HHHHHHHHHH
T ss_pred CC---CccCCCcCCCCCCCHHHhCCC-CC---chhhHHHHHH
Confidence 22 223456799999999999764 33 2355666663
No 223
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.95 E-value=9.1e-29 Score=278.78 Aligned_cols=189 Identities=20% Similarity=0.197 Sum_probs=150.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCC------CeEEEEEEeecccchh-----------hhhHHHHHHHhhhcCCcccee
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGE------GMEVAVKVFDLQCGRA-----------FKSFDVECEMMKSIRHRNLIK 840 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~ 840 (982)
..++|++.+.||+|+||.||+|++.. ++.||||++....... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998654 4789999987543211 122344566677788999999
Q ss_pred EEeeecCC----CeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc--
Q 036229 841 VISSCSTE----EFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-- 914 (982)
Q Consensus 841 l~~~~~~~----~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-- 914 (982)
+++++... ...++||||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998664 4689999999 99999999887677999999999999999999999 99999999999999999
Q ss_pred CCCcEEEEeecCceeecCCCCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 915 DNMVAHLSDFGIAKLLIGEDQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 915 ~~~~~kL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.++.+||+|||+|+.+...... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 249 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRR---GDLEILGY 249 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHH---HHHHHHHH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCch---hhHHHHHH
Confidence 8899999999999876432211 11134559999999999987765543 45566663
No 224
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.95 E-value=1.2e-28 Score=285.43 Aligned_cols=187 Identities=24% Similarity=0.395 Sum_probs=152.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
..++|+..+.||+|+||.||+|++..+..||||+++... ...+++.+|++++++++||||+++++++.. +..++||||
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 456789999999999999999999888899999997543 335689999999999999999999999876 678999999
Q ss_pred ccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 858 MPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 858 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
+++|+|.+++... ...+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+++...... .
T Consensus 260 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~ 335 (452)
T 1fmk_A 260 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 335 (452)
T ss_dssp CTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred hcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-e
Confidence 9999999999753 345889999999999999999999 9999999999999999999999999999998764322 1
Q ss_pred eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......+++.|+|||++.+..++. .+|+|++|+
T Consensus 336 ~~~~~~~~~~~y~aPE~~~~~~~~~---~sDvwslG~ 369 (452)
T 1fmk_A 336 TARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGI 369 (452)
T ss_dssp -------CCGGGSCHHHHHHCCCCH---HHHHHHHHH
T ss_pred ecccCCcccccccCHhHHhcCCCCc---cccHHhHHH
Confidence 2223445788999999997665553 356666664
No 225
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.95 E-value=1.5e-28 Score=285.01 Aligned_cols=182 Identities=25% Similarity=0.281 Sum_probs=147.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCC------C
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE------E 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 849 (982)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 578999999999999999999854 5899999999754 334467788999999999999999999998654 3
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..|+||||+++ ++.+.+.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 57666643 3789999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... .......+||+.|+|||++.+..++.. +|+|++|+
T Consensus 214 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~ 251 (464)
T 3ttj_A 214 AGT---SFMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGC 251 (464)
T ss_dssp ------CCCC----CCCTTCCHHHHTTCCCCTT---HHHHHHHH
T ss_pred cCC---CcccCCCcccccccCHHHHcCCCCCHH---HHHHHHHH
Confidence 532 223345789999999999987766644 45566663
No 226
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.95 E-value=3e-28 Score=271.54 Aligned_cols=188 Identities=29% Similarity=0.446 Sum_probs=145.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHH--hhhcCCccceeEEeee-----cCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEM--MKSIRHRNLIKVISSC-----STEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~-----~~~~~ 850 (982)
..++|++.+.||+|+||.||+|+. +++.||||+++... ...+..|.++ ++.++||||+++++++ .....
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 357899999999999999999987 68999999997543 2334444444 5568999999999744 33446
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC---------CeEEcCCCCCCEEEcCCCcEEE
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA---------PVIHCDLKPSNVLLDDNMVAHL 921 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~---------~ivHrDlkp~NILl~~~~~~kL 921 (982)
.++||||+++|+|.+++.... .++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEE
Confidence 789999999999999997654 488899999999999999999 88 9999999999999999999999
Q ss_pred EeecCceeecCCCC------ceeecccccccccccCceeeeeee----eeEEeeEeeeeeeee
Q 036229 922 SDFGIAKLLIGEDQ------SITQTQTLATIGYMAPGLFHVKYI----LFVVNFLTSYSFLMI 974 (982)
Q Consensus 922 ~DFGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~d~~~~~~~ 974 (982)
+|||+|+.+..... ........||+.|+|||++.+... ...+..+|+|++|++
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~i 224 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLI 224 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHH
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHH
Confidence 99999987643221 122234579999999999976211 111123556666643
No 227
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.95 E-value=2.3e-28 Score=271.86 Aligned_cols=189 Identities=25% Similarity=0.427 Sum_probs=150.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeCC-----CeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGE-----GMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.++|+..+.||+|+||.||+|+... +..||+|+++... ......+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567888999999999999998532 3469999997543 334567889999999999999999999999999999
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999877677999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCC-ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQ-SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... ........+|+.|+|||++.+..++. .+|+|++|+
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 238 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTS---ASDVWSFGI 238 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCH---HHHHHHHHH
T ss_pred ccccccccCCCCccccccCchhcccCCCCc---hhhhHHHHH
Confidence 321 11223345678999999997665554 355666664
No 228
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=4.3e-28 Score=266.69 Aligned_cols=188 Identities=22% Similarity=0.290 Sum_probs=148.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 4578999999999999999999964 68999999987542 2334778899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCC
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 933 (982)
||||+++++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 112 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 999999999999997643 5899999999999999999999 999999999999999999999999999999865332
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. ........|++.|+|||++.+..++. .+|+|++|+
T Consensus 188 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 223 (309)
T 2h34_A 188 K-LTQLGNTVGTLYYMAPERFSESHATY---RADIYALTC 223 (309)
T ss_dssp ----------CCGGGCCGGGTCC----C---CCHHHHHHH
T ss_pred c-cccccccCCCcCccCHHHHcCCCCCc---hHhHHHHHH
Confidence 2 12223567999999999997765554 355666663
No 229
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.95 E-value=1.7e-28 Score=275.26 Aligned_cols=188 Identities=24% Similarity=0.345 Sum_probs=154.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecC--------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCST-------- 847 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 847 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ......+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999996 468999999986442 2234577899999999999999999999876
Q ss_pred CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 848 EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
.+..++||||+++ ++.+.+......+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 4468999999975 888888776667999999999999999999999 999999999999999999999999999999
Q ss_pred eeecCCC--CceeecccccccccccCceeeee-eeeeEEeeEeeeeeee
Q 036229 928 KLLIGED--QSITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~ 973 (982)
+.+.... .........||+.|+|||++.+. .++. .+|+|++|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~DiwslG~ 217 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP---PIDLWGAGC 217 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCT---HHHHHHHHH
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCc---HhHHHHHHH
Confidence 8764322 12223456789999999998653 3343 345566663
No 230
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.94 E-value=5.8e-28 Score=264.99 Aligned_cols=185 Identities=28% Similarity=0.359 Sum_probs=158.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.+.|+..+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|+.+++.++||||+++++++..++..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 467999999999999999999864 58999999997553 3446788999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
|+++++|.+++.. ..+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 101 ~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 9999999999864 35899999999999999999999 9999999999999999999999999999998764322
Q ss_pred eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+..++.. +|+|++|+
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 207 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSK---ADIWSLGI 207 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTH---HHHHHHHH
T ss_pred cccCccCCCcCccCHHHHhcCCCCch---hhhHHHHH
Confidence 22345679999999999977655543 45666663
No 231
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.1e-27 Score=255.69 Aligned_cols=218 Identities=27% Similarity=0.346 Sum_probs=133.0
Q ss_pred CCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCcc
Q 036229 66 TPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAF 145 (982)
Q Consensus 66 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 145 (982)
.++|.|.|+.|+ ....++.+++++++++ .+|..+. ++|+.|+|++|++++..+.++..+++|++|+|++|+++...
T Consensus 2 ~~~C~~~~~~C~-c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCS-CNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBE-EETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCE-eCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 468999999998 3344567788888877 4665443 45666666666666444445666666666666666665333
Q ss_pred CccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccc
Q 036229 146 PSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNL 225 (982)
Q Consensus 146 p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 225 (982)
+..|.++++|++|+|++|.++ .+|...|..+++|++|+|++|++++..+ ..|..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~------------------------~~~~~l 132 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPP------------------------RVFDSL 132 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCT------------------------TTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCC-cCCHhHcccccCCCEEECCCCccCeeCH------------------------HHhCcC
Confidence 333445555555555555554 3444444444555555555554444444 444455
Q ss_pred cchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEc
Q 036229 226 TKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDL 305 (982)
Q Consensus 226 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 305 (982)
++|++|+|++|++++..+..|..+++|+.|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 133 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 212 (270)
T 2o6q_A 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQL 212 (270)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEe
Confidence 55555555555555444444555566666666666666555556777777777777777777666666777788888888
Q ss_pred cCccccc
Q 036229 306 SHNKLVG 312 (982)
Q Consensus 306 s~N~l~~ 312 (982)
++|.+..
T Consensus 213 ~~N~~~c 219 (270)
T 2o6q_A 213 QENPWDC 219 (270)
T ss_dssp CSSCBCC
T ss_pred cCCCeeC
Confidence 8887754
No 232
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.94 E-value=2.3e-28 Score=265.06 Aligned_cols=188 Identities=24% Similarity=0.383 Sum_probs=153.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCC----CeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGE----GMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|++.. +..||+|+++.. .....+++.+|++++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 35789999999999999999998532 456999998755 234567889999999999999999999998754 568
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999877667899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. ........+|+.|+|||++.+..++.. +|+|++|+
T Consensus 166 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 202 (281)
T 3cc6_A 166 ED-YYKASVTRLPIKWMSPESINFRRFTTA---SDVWMFAV 202 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred cc-ccccccCCCCcceeCchhhccCCCCch---hccHHHHH
Confidence 22 122234567889999999976655543 55666664
No 233
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.94 E-value=3.1e-28 Score=285.81 Aligned_cols=184 Identities=22% Similarity=0.355 Sum_probs=151.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|+++++.++||||+++++++.+++..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999965 68999999997542 334567899999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCceeecC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~ 932 (982)
||+++|+|.+.+.... .+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+|.....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887653 4889999999999999999999 999999999999999975 45699999999987643
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. ......||+.|+|||++.+. ++. .+|+|++|+
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~~~-~~~---~~DiwslG~ 225 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLRKK-YDE---KCDVWSIGV 225 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHTTC-BCT---HHHHHHHHH
T ss_pred Cc---cccccCCCcCeeCHHHHccc-CCC---chhHHHHHH
Confidence 22 23456799999999998653 333 355666663
No 234
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.94 E-value=4.5e-28 Score=285.19 Aligned_cols=185 Identities=23% Similarity=0.376 Sum_probs=153.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc-------------hhhhhHHHHHHHhhhcCCccceeEEe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG-------------RAFKSFDVECEMMKSIRHRNLIKVIS 843 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~l~~ 843 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4678999999999999999999864 588999999875421 23567889999999999999999999
Q ss_pred eecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC---cEE
Q 036229 844 SCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM---VAH 920 (982)
Q Consensus 844 ~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~---~~k 920 (982)
++.+++..++||||+++|+|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887643 4899999999999999999999 99999999999999998765 699
Q ss_pred EEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 921 LSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 921 L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|+|||+|..+... .......||+.|+|||++.+. ++. .+|+|++|+
T Consensus 190 l~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~---~~DiwslG~ 235 (504)
T 3q5i_A 190 IVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLKKK-YNE---KCDVWSCGV 235 (504)
T ss_dssp ECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHTTC-BCT---HHHHHHHHH
T ss_pred EEECCCCEEcCCC---CccccccCCcCCCCHHHhccC-CCc---hHHHHHHHH
Confidence 9999999876432 223456799999999998754 333 345566663
No 235
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.94 E-value=5.4e-29 Score=271.11 Aligned_cols=190 Identities=24% Similarity=0.420 Sum_probs=161.2
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeCC-CeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIGE-GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
...++|++.+.||+|+||.||+|++.. ++.||+|+++.. ....+++.+|++++++++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 356789999999999999999999754 899999999754 344678899999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 856 EYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 856 E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
||+++++|.+++... ...+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999999999764 345899999999999999999999 9999999999999999999999999999998764332
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
........+|+.|+|||++.+..++.. +|+|++|++
T Consensus 166 -~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 201 (288)
T 3kfa_A 166 -YTAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVL 201 (288)
T ss_dssp -SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred -cccccCCccccCcCChhhhccCCCCch---hhHHHHHHH
Confidence 233345567889999999977665543 456666643
No 236
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.94 E-value=2.9e-28 Score=263.47 Aligned_cols=185 Identities=24% Similarity=0.365 Sum_probs=149.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 468999999999999999999975 68999999997542 23356788999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~- 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG- 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC-
Confidence 99999999999997654 4789999999999999999999 999999999999999999999999999999875322
Q ss_pred CceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
.......|++.|+|||++.+..+.. ..+|+|++|
T Consensus 165 --~~~~~~~~~~~y~aPE~~~~~~~~~--~~~Di~slG 198 (276)
T 2h6d_A 165 --EFLRTSCGSPNYAAPEVISGRLYAG--PEVDIWSCG 198 (276)
T ss_dssp --------------CCTGGGTTSCCCH--HHHHHHHHH
T ss_pred --cceecccCCccccCHHHHcCCCCCC--ccchHHHHH
Confidence 1223457899999999997654321 234556665
No 237
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.94 E-value=4.7e-28 Score=267.18 Aligned_cols=187 Identities=26% Similarity=0.333 Sum_probs=154.5
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34678999999999999999999865 48999999997543 3467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++++|.+++......+++..+..++.|++.||.||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 999999999999766667899999999999999999999 9999999999999999999999999999998764322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+..++.. +|+|++|+
T Consensus 180 -~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 213 (314)
T 3com_A 180 -AKRNTVIGTPFWMAPEVIQEIGYNCV---ADIWSLGI 213 (314)
T ss_dssp -SCBCCCCSCGGGCCHHHHSSSCBCTT---HHHHHHHH
T ss_pred -cccCccCCCCCccChhhcCCCCCCcc---ccHHHHHH
Confidence 22334678999999999977655533 45666663
No 238
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.94 E-value=2.3e-28 Score=268.00 Aligned_cols=190 Identities=24% Similarity=0.363 Sum_probs=151.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecC---------
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCST--------- 847 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 847 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++.. ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999964 6899999999643 3445778999999999999999999998754
Q ss_pred ----CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEe
Q 036229 848 ----EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 923 (982)
Q Consensus 848 ----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~D 923 (982)
.+..++||||+++|+|.+++.......++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 45789999999999999999877767888999999999999999999 99999999999999999999999999
Q ss_pred ecCceeecCCCC------------ceeecccccccccccCceeeee-eeeeEEeeEeeeeeeee
Q 036229 924 FGIAKLLIGEDQ------------SITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLMI 974 (982)
Q Consensus 924 FGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~~ 974 (982)
||.+........ ........||+.|+|||++.+. .++ ..+|+|++|++
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~i 220 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN---EKIDMYSLGII 220 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCC---THHHHHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCc---chhhHHHHHHH
Confidence 999986532110 1122345789999999998654 333 33556666643
No 239
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.94 E-value=2.6e-28 Score=265.03 Aligned_cols=184 Identities=26% Similarity=0.428 Sum_probs=155.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecC---------
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCST--------- 847 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 847 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999975 69999999997543 456789999999999999999998754
Q ss_pred -------CCeeEEEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcE
Q 036229 848 -------EEFKALILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 919 (982)
Q Consensus 848 -------~~~~~lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 919 (982)
....++||||+++++|.+++... ...+++..+..++.|++.||.||| ++||+||||||+||++++++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCE
Confidence 44589999999999999999754 346899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 920 HLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
||+|||++....... ......||+.|+|||++.+..++. .+|+|++|++
T Consensus 162 kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~i 210 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLI 210 (284)
T ss_dssp EECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCT---HHHHHHHHHH
T ss_pred EECcchhheeccccc---cccccCCcccccChhhhccCCCcc---hhhhHHHHHH
Confidence 999999998764332 223457999999999997765553 3556666643
No 240
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.94 E-value=3.1e-28 Score=267.83 Aligned_cols=185 Identities=27% Similarity=0.399 Sum_probs=150.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc-----chhhhhHHHHHHHhhhcC---CccceeEEeeecCC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC-----GRAFKSFDVECEMMKSIR---HRNLIKVISSCSTE 848 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~ 848 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467999999999999999999995 468999999987432 122346778888877764 99999999998765
Q ss_pred C-----eeEEEEEeccCCChHHHHhcCCC-cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEE
Q 036229 849 E-----FKALILEYMPHGSLEKSLYSSNY-ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLS 922 (982)
Q Consensus 849 ~-----~~~lv~E~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~ 922 (982)
. ..++||||++ ++|.+++..... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5789999996 599999876543 4899999999999999999999 9999999999999999999999999
Q ss_pred eecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 923 DFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 923 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
|||+|+..... .......||+.|+|||++.+..++.. +|+|++|
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG 206 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATP---VDMWSVG 206 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCST---HHHHHHH
T ss_pred eCccccccCCC---cccCCccccccccCchHHcCCCCCch---HHHHHHH
Confidence 99999865322 22345679999999999977666544 4556666
No 241
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.94 E-value=9.1e-29 Score=280.09 Aligned_cols=169 Identities=18% Similarity=0.195 Sum_probs=138.0
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHH---HhhhcCCccceeEE-------ee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECE---MMKSIRHRNLIKVI-------SS 844 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~nIv~l~-------~~ 844 (982)
.++|++.+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|++ ++++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788999999999999999995 56999999999743 3345678899994 55566899999998 55
Q ss_pred ecCCC-----------------eeEEEEEeccCCChHHHHhcCCC------cCCHHHHHHHHHHHHHHHHHHHccCCCCe
Q 036229 845 CSTEE-----------------FKALILEYMPHGSLEKSLYSSNY------ILDIFQRLNIMVDVATTLEYLHFGYSAPV 901 (982)
Q Consensus 845 ~~~~~-----------------~~~lv~E~~~~gsL~~~l~~~~~------~~~~~~~~~i~~qi~~~L~yLH~~~~~~i 901 (982)
+..++ ..|+||||+ +|+|.+++...+. .+++..+..++.|++.||+||| ++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55443 278999999 6799999975422 2335788889999999999999 9999
Q ss_pred EEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeee
Q 036229 902 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVK 957 (982)
Q Consensus 902 vHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 957 (982)
+||||||+||+++.++.+||+|||+|+... .......| +.|+|||++.+.
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~ 277 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARR 277 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhccc
Confidence 999999999999999999999999998631 12345567 999999999766
No 242
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.94 E-value=2.8e-28 Score=268.92 Aligned_cols=192 Identities=26% Similarity=0.401 Sum_probs=146.2
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCC
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE 849 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 849 (982)
....++|.+.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++...+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 345678999999999999999999753 3568999998754 2344567899999999999999999999987655
Q ss_pred -----eeEEEEEeccCCChHHHHhc-----CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcE
Q 036229 850 -----FKALILEYMPHGSLEKSLYS-----SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVA 919 (982)
Q Consensus 850 -----~~~lv~E~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 919 (982)
..++||||+++|+|.+++.. ....+++..+..++.|++.||.||| ++||+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcE
Confidence 35999999999999999853 3346899999999999999999999 9999999999999999999999
Q ss_pred EEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 920 HLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||+|||+++...............+++.|+|||++.+..++.. +|+|++|+
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 237 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSK---SDVWAFGV 237 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHH---HHHHHHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccch---hhhHHHHH
Confidence 9999999987644333333345567889999999977665543 55666664
No 243
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.94 E-value=4.5e-28 Score=266.24 Aligned_cols=182 Identities=26% Similarity=0.403 Sum_probs=144.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEec
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
.++|++.+.||+|+||.||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 35789999999999999999988 4788999998643 345788999999999999999999999874 478999999
Q ss_pred cCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc-EEEEeecCceeecCCCC
Q 036229 859 PHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV-AHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 859 ~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~-~kL~DFGla~~~~~~~~ 935 (982)
++|+|.+++..... .+++..+..++.|+++||+|||..+.+||+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999986543 4688899999999999999999222289999999999999998876 799999999865221
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.....||+.|+|||++.+..++.. +|+|++|+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 191 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEK---CDVFSWGI 191 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTH---HHHHHHHH
T ss_pred ---cccCCCCCceEChhhhCCCCCCcH---HHHHHHHH
Confidence 223469999999999977655543 55666663
No 244
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.94 E-value=3e-28 Score=268.26 Aligned_cols=188 Identities=26% Similarity=0.388 Sum_probs=147.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|+++.. .....+++.+|++++++++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 456799999999999999999986 46899999999743 23455778899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhc---CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 854 ILEYMPHGSLEKSLYS---SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
||||+++++|.+++.. ....+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 3456899999999999999999999 999999999999999999999999999999865
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... .......|++.|+|||++.+..++.. +|+|++|+
T Consensus 187 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~ 224 (310)
T 2wqm_A 187 SSKT--TAAHSLVGTPYYMSPERIHENGYNFK---SDIWSLGC 224 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHH---HHHHHHHH
T ss_pred cCCC--ccccccCCCeeEeChHHhCCCCCCch---hhHHHHHH
Confidence 3222 22234578999999999977655533 55666663
No 245
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.94 E-value=3.3e-28 Score=266.28 Aligned_cols=189 Identities=24% Similarity=0.388 Sum_probs=154.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeCC----CeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeee-cCCCeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGE----GMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSC-STEEFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~ 852 (982)
..+|++.+.||+|+||.||+|+..+ ...||+|.++.. .....+++.+|++++++++||||+++++++ ..++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4568889999999999999998532 346899998753 334457789999999999999999999985 5566889
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||++++++.+||+|||+|+....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999877777899999999999999999999 99999999999999999999999999999987643
Q ss_pred CCC--ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQ--SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... ........+|+.|+|||++.+..++.. .|+|++|+
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 220 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGV 220 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChH---HHHHHHHH
Confidence 221 122345567889999999977665543 45666664
No 246
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.94 E-value=2.2e-28 Score=286.73 Aligned_cols=185 Identities=24% Similarity=0.381 Sum_probs=156.9
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999865 68999999996542 3346778999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceee
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~ 930 (982)
||||+.+|+|.+++.... .+++..+..++.|++.||.||| ++||+||||||+||++ +.++.+||+|||+|+.+
T Consensus 104 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 999999999999887644 5899999999999999999999 9999999999999999 46789999999999876
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... ......||+.|+|||++.+. ++. .+|+|++|+
T Consensus 180 ~~~~---~~~~~~gt~~y~aPE~~~~~-~~~---~~DiwslG~ 215 (484)
T 3nyv_A 180 EASK---KMKDKIGTAYYIAPEVLHGT-YDE---KCDVWSTGV 215 (484)
T ss_dssp CCCC---SHHHHTTGGGTCCHHHHHTC-CCT---HHHHHHHHH
T ss_pred cccc---ccccCCCCccccCceeecCC-CCC---cceeHHHHH
Confidence 3322 23456799999999999764 332 355666663
No 247
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=5.3e-28 Score=274.46 Aligned_cols=183 Identities=26% Similarity=0.368 Sum_probs=146.2
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecC-------
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCST------- 847 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------- 847 (982)
+...++|++.+.||+|+||.||+|+. .+++.||||++.... ....+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 44568899999999999999999985 569999999986442 223479999999999999999999833
Q ss_pred -------------------------------CCeeEEEEEeccCCChHHHHhc---CCCcCCHHHHHHHHHHHHHHHHHH
Q 036229 848 -------------------------------EEFKALILEYMPHGSLEKSLYS---SNYILDIFQRLNIMVDVATTLEYL 893 (982)
Q Consensus 848 -------------------------------~~~~~lv~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~L~yL 893 (982)
....++||||++ |+|.+.+.. ....+++..+..++.|++.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345889999997 487777653 345689999999999999999999
Q ss_pred HccCCCCeEEcCCCCCCEEEc-CCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeee-eeeEEeeEeeeee
Q 036229 894 HFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSF 971 (982)
Q Consensus 894 H~~~~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~ 971 (982)
| ++||+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+.. ++.. +|+|++
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~---~Diwsl 228 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPS---IDLWSI 228 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTH---HHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcc---hhhhhH
Confidence 9 99999999999999998 68899999999999764332 233567899999999986543 4433 445555
Q ss_pred e
Q 036229 972 L 972 (982)
Q Consensus 972 ~ 972 (982)
|
T Consensus 229 G 229 (383)
T 3eb0_A 229 G 229 (383)
T ss_dssp H
T ss_pred H
Confidence 5
No 248
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.94 E-value=2.2e-28 Score=275.35 Aligned_cols=184 Identities=21% Similarity=0.305 Sum_probs=155.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.. .....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467999999999999999999865 5899999999765 33445778999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++++|.+++.... .+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997654 4889999999999999999999 75 9999999999999999999999999999765221
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.+..++.. +|+|++|+
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 218 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQ---SDIWSMGL 218 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHH---HHHHHHHH
T ss_pred --cccCCCCCCCeECHHHHcCCCCCch---hhHHHHHH
Confidence 2234679999999999977665543 45566653
No 249
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.94 E-value=5.2e-28 Score=268.44 Aligned_cols=187 Identities=29% Similarity=0.463 Sum_probs=151.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeE--EEEEEeecc-cchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGME--VAVKVFDLQ-CGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|+.. ++.. ||+|.++.. .....+++.+|+++++++ +||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 368999999999999999999853 5664 499988743 334557789999999999 99999999999999999999
Q ss_pred EEEeccCCChHHHHhcCC---------------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc
Q 036229 854 ILEYMPHGSLEKSLYSSN---------------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV 918 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~ 918 (982)
||||+++|+|.+++...+ ..+++.++..++.|++.||+||| ++||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999997653 36899999999999999999999 999999999999999999999
Q ss_pred EEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 919 AHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 919 ~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
+||+|||+++... .........+++.|+|||++.+..++.. +|+|++|++
T Consensus 181 ~kL~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~i 230 (327)
T 1fvr_A 181 AKIADFGLSRGQE---VYVKKTMGRLPVRWMAIESLNYSVYTTN---SDVWSYGVL 230 (327)
T ss_dssp EEECCTTCEESSC---EECCC----CCTTTCCHHHHHHCEECHH---HHHHHHHHH
T ss_pred EEEcccCcCcccc---ccccccCCCCCccccChhhhccccCCch---hcchHHHHH
Confidence 9999999998431 1122234457889999999977655543 556666643
No 250
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.5e-28 Score=274.88 Aligned_cols=180 Identities=24% Similarity=0.315 Sum_probs=145.6
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCC------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE------ 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 849 (982)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46899999999999999999986 46999999998543 2334567889999999999999999999987653
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..|+||||+ +++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 78999998763 4889999999999999999999 99999999999999999999999999999997
Q ss_pred ecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFL 972 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~ 972 (982)
... ......||+.|+|||++.+ ..++.. +|+|++|
T Consensus 178 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwslG 213 (367)
T 1cm8_A 178 ADS-----EMTGYVVTRWYRAPEVILNWMRYTQT---VDIWSVG 213 (367)
T ss_dssp CCS-----SCCSSCSCGGGCCTHHHHTTTCCCTT---HHHHHHH
T ss_pred ccc-----ccCcCcCCCCcCCHHHHhCCCCCChh---hhHHHHH
Confidence 532 1245678999999999866 344433 4455555
No 251
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.94 E-value=2.2e-28 Score=271.43 Aligned_cols=190 Identities=23% Similarity=0.361 Sum_probs=153.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEe------CCCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI------GEGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
..++|++.+.||+|+||.||+|++ .+++.||||++... ......++.+|+.++++++||||+++++++..++.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 357899999999999999999983 24778999999644 33445678899999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC------CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEE
Q 036229 851 KALILEYMPHGSLEKSLYSSN------YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHL 921 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~------~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL 921 (982)
.++||||+++++|.+++.... ..+++..+..++.|++.||.||| ++||+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence 999999999999999998653 34889999999999999999999 999999999999999984 446999
Q ss_pred EeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 922 SDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 922 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+|||++................||+.|+|||++.+..++.. +|+|++|+
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 233 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGV 233 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCch---hhHHHHHH
Confidence 99999986543333333345668999999999977655543 55666664
No 252
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.94 E-value=3.5e-28 Score=272.41 Aligned_cols=184 Identities=21% Similarity=0.324 Sum_probs=156.6
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchh-----------------hhhHHHHHHHhhhcCCccceeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRA-----------------FKSFDVECEMMKSIRHRNLIKV 841 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~nIv~l 841 (982)
.++|++.+.||+|+||.||+|+. +++.||+|++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 47899999999999999999999 89999999997442111 1788999999999999999999
Q ss_pred EeeecCCCeeEEEEEeccCCChHHH------HhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCC-CCeEEcCCCCCCEEE
Q 036229 842 ISSCSTEEFKALILEYMPHGSLEKS------LYSS-NYILDIFQRLNIMVDVATTLEYLHFGYS-APVIHCDLKPSNVLL 913 (982)
Q Consensus 842 ~~~~~~~~~~~lv~E~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~-~~ivHrDlkp~NILl 913 (982)
++++.+++..++||||+++|+|.++ +... ...+++..+..++.|++.||.||| + +||+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5442 456899999999999999999999 8 999999999999999
Q ss_pred cCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeee-eeeeEEeeEeeeeee
Q 036229 914 DDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFL 972 (982)
Q Consensus 914 ~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~ 972 (982)
+.++.+||+|||.+...... ......||+.|+|||++.+. .+... .+|+|++|
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~--~~Di~slG 239 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGA--KVDIWSLG 239 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHH--HHHHHHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcc--hhhHHHHH
Confidence 99999999999999876332 33456799999999999765 33321 34556655
No 253
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.94 E-value=1e-27 Score=262.33 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=156.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---------chhhhhHHHHHHHhhhcC-CccceeEEeeec
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---------GRAFKSFDVECEMMKSIR-HRNLIKVISSCS 846 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~ 846 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999864 58999999997542 123457789999999995 999999999999
Q ss_pred CCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 036229 847 TEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 926 (982)
Q Consensus 847 ~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGl 926 (982)
.++..++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999764 35899999999999999999999 99999999999999999999999999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeee---eeeEEeeEeeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKY---ILFVVNFLTSYSFLM 973 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~~~~d~~~~~~ 973 (982)
+....... ......|++.|+|||++.+.. ....+..+|+|++|+
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~ 217 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHH
T ss_pred hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHH
Confidence 98764322 223467899999999985321 111223456666663
No 254
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.94 E-value=8.3e-28 Score=267.22 Aligned_cols=179 Identities=21% Similarity=0.351 Sum_probs=150.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecC--CCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCST--EEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.. ..+.+.+|++++++++ ||||+++++++.. ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999999985 56899999998743 3467889999999997 9999999999987 5678999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC-cEEEEeecCceeecCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM-VAHLSDFGIAKLLIGE 933 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~ 933 (982)
|||+++++|.+++.. +++.++..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||+|+.....
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998853 788999999999999999999 99999999999999999776 8999999999876432
Q ss_pred CCceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
. ......||+.|+|||++.+ ..++.. +|+|++|+
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~---~DiwslG~ 219 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYS---LDMWSLGC 219 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTH---HHHHHHHH
T ss_pred C---ccccccccccccChhhhcCCCcCCch---hhHHHHHH
Confidence 2 2344678999999999865 334433 45566653
No 255
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=9.8e-29 Score=271.13 Aligned_cols=173 Identities=27% Similarity=0.441 Sum_probs=133.9
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhh--cCCccceeEEeeecCCC----eeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKS--IRHRNLIKVISSCSTEE----FKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 852 (982)
.++|++.+.||+|+||.||+|+. +++.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 46899999999999999999987 4889999998643 33566778888877 79999999999997766 789
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcEEEEeecCc
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG-----YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIA 927 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~kL~DFGla 927 (982)
+||||+++|+|.+++... .+++..+..++.|++.|++|||.. +++||+||||||+||+++.++.+||+|||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 999999999999999654 467788899999999999999932 2689999999999999999999999999999
Q ss_pred eeecCCCCce--eecccccccccccCceeeee
Q 036229 928 KLLIGEDQSI--TQTQTLATIGYMAPGLFHVK 957 (982)
Q Consensus 928 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~ 957 (982)
+......... ......||+.|+|||++.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCc
Confidence 8765433221 12345799999999998665
No 256
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.94 E-value=8.7e-28 Score=260.80 Aligned_cols=185 Identities=25% Similarity=0.349 Sum_probs=154.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc------hhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG------RAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++.... ...+.+.+|++++++++||||+++++++..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 357999999999999999999975 589999999875421 1356789999999999999999999999999999
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC----cEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM----VAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~----~~kL~DFGla 927 (982)
++||||+++++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999997543 5899999999999999999999 99999999999999998877 8999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
....... ......||+.|+|||++.+..++. .+|+|++|+
T Consensus 160 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 199 (283)
T 3bhy_A 160 HKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGV 199 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCT---HHHHHHHHH
T ss_pred eeccCCC---cccccCCCcCccCcceecCCCCCc---chhhhhHHH
Confidence 8763322 223456999999999997665543 355666663
No 257
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.94 E-value=3.7e-28 Score=268.99 Aligned_cols=185 Identities=24% Similarity=0.318 Sum_probs=148.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--------chhhhhHHHHHHHhhhcCCccceeEEeeecCC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--------GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE 848 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 848 (982)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999864 58999999986432 12235688999999999999999999998766
Q ss_pred CeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEeec
Q 036229 849 EFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDFG 925 (982)
Q Consensus 849 ~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kL~DFG 925 (982)
+ .++||||+++++|.+++... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++. +||+|||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 162 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 162 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred c-eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence 5 79999999999999988654 45899999999999999999999 999999999999999986654 9999999
Q ss_pred CceeecCCCCceeecccccccccccCceeee---eeeeeEEeeEeeeeeee
Q 036229 926 IAKLLIGEDQSITQTQTLATIGYMAPGLFHV---KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 926 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~~~d~~~~~~ 973 (982)
+++..... .......||+.|+|||++.+ ..++ ..+|+|++|+
T Consensus 163 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~---~~~Di~slG~ 207 (322)
T 2ycf_A 163 HSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYN---RAVDCWSLGV 207 (322)
T ss_dssp TCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCT---THHHHHHHHH
T ss_pred cceecccc---cccccccCCcCccCchhhccCCCCCCC---chhhHHHHHH
Confidence 99876322 12234578999999999742 2233 3355666664
No 258
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=4.1e-28 Score=290.82 Aligned_cols=186 Identities=22% Similarity=0.356 Sum_probs=149.2
Q ss_pred CCCccc-eeeeeceEEEEEEEeC---CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 781 RFSENN-LIGRGGFGSVYKARIG---EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 781 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+++.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344444 7999999999999753 46789999997543 3456789999999999999999999999976 5689999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||+++|+|.+++......+++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+|+.+.....
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999877777999999999999999999999 99999999999999999999999999999987643222
Q ss_pred c-eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 S-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
. .......+++.|+|||++.+..++.. +|+|++|+
T Consensus 492 ~~~~~~~~~~~~~y~APE~~~~~~~~~~---sDvwSlGv 527 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGV 527 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred eeeeccCCCCccceeCHhhhcCCCCCcH---HHHHHHHH
Confidence 1 11223346789999999977666543 55666664
No 259
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.94 E-value=1.2e-27 Score=261.29 Aligned_cols=188 Identities=25% Similarity=0.350 Sum_probs=152.2
Q ss_pred cCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEec
Q 036229 780 NRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
++|.....||+|+||.||+|+. .+++.||+|+++.......+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 4456667999999999999986 458899999998766666778999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-CCcEEEEeecCceeecCCCC
Q 036229 859 PHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 859 ~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~ 935 (982)
++++|.+++..... ..++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||.+.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 99999999986532 4568888999999999999999 999999999999999987 8999999999998763321
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+.... .+..+|+|++|+
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Di~slG~ 213 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRG-YGKAADIWSLGC 213 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGG-CSHHHHHHHHHH
T ss_pred -CcccccCCCccccChhhhcCCCCC-CCcHHHHHHHHH
Confidence 122346799999999998654211 122345566663
No 260
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.94 E-value=5.4e-28 Score=263.60 Aligned_cols=188 Identities=23% Similarity=0.336 Sum_probs=152.3
Q ss_pred HhcCCCccc-eeeeeceEEEEEEEe---CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 778 ATNRFSENN-LIGRGGFGSVYKARI---GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 778 ~~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
..++|.+.+ .||+|+||.||+|.+ .+++.||||+++... ....+++.+|+++++.++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 346788887 999999999999964 347889999997542 33467889999999999999999999999 55678
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999999999997643 4899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCce-eecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQSI-TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...... ......+++.|+|||++.+..++. .+|+|++|+
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 208 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSS---KSDVWSFGV 208 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEH---HHHHHHHHH
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCCh---hhhHHHHHH
Confidence 433222 223345678999999997665543 356666664
No 261
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.94 E-value=2.5e-28 Score=273.00 Aligned_cols=187 Identities=20% Similarity=0.193 Sum_probs=147.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecccch-----------hhhhHHHHHHHhhhcCCccceeEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQCGR-----------AFKSFDVECEMMKSIRHRNLIKVIS 843 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~nIv~l~~ 843 (982)
.++|++.+.||+|+||.||+|+.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999864 5788999998754321 1234667888899999999999999
Q ss_pred eecC----CCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCC--
Q 036229 844 SCST----EEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNM-- 917 (982)
Q Consensus 844 ~~~~----~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~-- 917 (982)
++.. ....++||||+ +++|.+++...+ .+++.++..++.|++.||+||| ++||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9877 77899999999 999999997654 6899999999999999999999 99999999999999999877
Q ss_pred cEEEEeecCceeecCCCCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 918 VAHLSDFGIAKLLIGEDQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 918 ~~kL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.+||+|||+|+.+...... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 248 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRR---SDVEILGY 248 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHH---HHHHHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCch---hhHHHHHH
Confidence 9999999999876432211 11245579999999999987655543 55566663
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.94 E-value=2.8e-28 Score=270.51 Aligned_cols=198 Identities=25% Similarity=0.310 Sum_probs=152.6
Q ss_pred CCHHHHHHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecC
Q 036229 770 FSYLELCRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCST 847 (982)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 847 (982)
++..++....++|++.+.||+|+||.||+|+. .+++.||+|+++... ...+.+.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 33334445678999999999999999999996 468999999997543 3457788999999999 89999999999866
Q ss_pred ------CCeeEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEE
Q 036229 848 ------EEFKALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAH 920 (982)
Q Consensus 848 ------~~~~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 920 (982)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 468899999999999999997643 46889999999999999999999 99999999999999999999999
Q ss_pred EEeecCceeecCCCCceeecccccccccccCceeeeee--eeeEEeeEeeeeeee
Q 036229 921 LSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKY--ILFVVNFLTSYSFLM 973 (982)
Q Consensus 921 L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~~~d~~~~~~ 973 (982)
|+|||++...... ........||+.|+|||++.... ....+...|+|++|+
T Consensus 170 l~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~ 222 (326)
T 2x7f_A 170 LVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222 (326)
T ss_dssp ECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHH
T ss_pred EeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHH
Confidence 9999999875322 11223457999999999986321 111223456666663
No 263
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.94 E-value=2.5e-28 Score=288.60 Aligned_cols=188 Identities=24% Similarity=0.387 Sum_probs=156.8
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
...++|++.+.||+|+||.||+|++..+..||||+++... ...+++.+|++++++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3456789999999999999999999888899999997543 335689999999999999999999999876 67899999
Q ss_pred eccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++|+|.+++... ...+++.++..++.||+.||+||| +++|+||||||+|||+++++.+||+|||+++..... .
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-E 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-H
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-c
Confidence 99999999999753 345889999999999999999999 999999999999999999999999999999865321 1
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
........++..|+|||++.+..++. .+|+|++|+
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~---~sDvwSlGv 452 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTI---KSDVWSFGI 452 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCH---HHHHHHHHH
T ss_pred eecccCCcCcccccCHHHhccCCCCc---hhhHHHHHH
Confidence 11123345678999999997665553 355666664
No 264
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.94 E-value=6.3e-28 Score=264.84 Aligned_cols=185 Identities=22% Similarity=0.360 Sum_probs=154.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|.+.+.||+|+||.||+|+.. +++.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 3467999999999999999999864 689999999986554455678899999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceeecCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~ 933 (982)
|+++++|.+++...+ .+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||++.....
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~- 161 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN- 161 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-
Confidence 999999999987644 4889999999999999999999 9999999999999999 7788999999999975421
Q ss_pred CCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+..++.. .|+|++|+
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 195 (304)
T 2jam_A 162 ---GIMSTACGTPGYVAPEVLAQKPYSKA---VDCWSIGV 195 (304)
T ss_dssp ---BTTHHHHSCCCBCCTTTBSSCSCCHH---HHHHHHHH
T ss_pred ---CccccccCCCCccChHHhccCCCCch---hhHHHHHH
Confidence 12234568999999999977665543 55566663
No 265
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.94 E-value=2.9e-28 Score=270.91 Aligned_cols=186 Identities=26% Similarity=0.364 Sum_probs=150.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 468999999999999999999965 48999999986442 233456789999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
||++++++.++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 999998888876543 45899999999999999999999 9999999999999999999999999999998653322
Q ss_pred ceeecccccccccccCceeeee-eeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+. .++. .+|+|++|+
T Consensus 179 -~~~~~~~~t~~y~aPE~~~~~~~~~~---~~Di~slG~ 213 (331)
T 4aaa_A 179 -EVYDDEVATRWYRAPELLVGDVKYGK---AVDVWAIGC 213 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCT---HHHHHHHHH
T ss_pred -cccCCCcCCccccCcccccCCCCcch---HHHHHHHHH
Confidence 223456799999999998664 3332 345566653
No 266
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.94 E-value=1.4e-27 Score=261.03 Aligned_cols=187 Identities=22% Similarity=0.305 Sum_probs=151.5
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeee-cCCCeeEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSC-STEEFKALIL 855 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~ 855 (982)
..++|++.+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+++++.++|++++..+.++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999985 569999999876442 335688999999999988877666655 6677889999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceeecC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~ 932 (982)
||+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||+|+....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 89999999876667999999999999999999999 9999999999999999 7889999999999997654
Q ss_pred CCCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 203 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGY 203 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHH---HHHHHHHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCch---hHHHHHHH
Confidence 3221 12235679999999999987665543 45666663
No 267
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=2.8e-28 Score=274.71 Aligned_cols=187 Identities=24% Similarity=0.388 Sum_probs=144.3
Q ss_pred CCCccceeeeeceEEEEEEEeC--C--CeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeec-CCCeeEEE
Q 036229 781 RFSENNLIGRGGFGSVYKARIG--E--GMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCS-TEEFKALI 854 (982)
Q Consensus 781 ~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~lv 854 (982)
.|+..+.||+|+||.||+|++. + +..||+|.++.. .....+++.+|+.++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4667789999999999999852 2 346899998643 3345678999999999999999999999865 45688999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+++|+|.+++......+++.++..++.|++.||+||| ++||+||||||+||++++++.+||+|||+|+.+....
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877777899999999999999999999 9999999999999999999999999999998764322
Q ss_pred Cc--eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 QS--ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. .......+|+.|+|||++.+..++.. +|+|++|+
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwSlG~ 284 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGV 284 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcH---HHHHHHHH
Confidence 11 12234567889999999977666543 45566663
No 268
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.94 E-value=1.6e-27 Score=261.76 Aligned_cols=191 Identities=20% Similarity=0.310 Sum_probs=153.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc----chhhhhHHHHHHHhhhcCCccceeEEeee--cCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC----GRAFKSFDVECEMMKSIRHRNLIKVISSC--STEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~ 850 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++ .+.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3578999999999999999999964 58999999997542 23457789999999999999999999998 44568
Q ss_pred eEEEEEeccCCChHHHHhc-CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 851 KALILEYMPHGSLEKSLYS-SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
.++||||++++ +.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 7676654 3446899999999999999999999 99999999999999999999999999999987
Q ss_pred ecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..............||+.|+|||++.+.... .+..+|+|++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Di~slG~ 201 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTF-SGFKVDIWSAGV 201 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCE-ESHHHHHHHHHH
T ss_pred cCccccccccccCCCCCCCcChhhccCcccC-CcchhhHHHHHH
Confidence 6443333344556799999999998653221 123456666664
No 269
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.94 E-value=1.6e-28 Score=269.28 Aligned_cols=188 Identities=23% Similarity=0.329 Sum_probs=153.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|+++++.++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4578999999999999999999975 589999999976665667889999999999999999999999999999999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCc
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQS 936 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 936 (982)
|+++++|.+++......+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999998876667899999999999999999999 999999999999999999999999999997643211 1
Q ss_pred eeecccccccccccCceee-----eeeeeeEEeeEeeeeeee
Q 036229 937 ITQTQTLATIGYMAPGLFH-----VKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 937 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++. +..++ ..+|+|++|+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~---~~~Di~slG~ 210 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYD---YKADIWSLGI 210 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTT---THHHHHHHHH
T ss_pred cccccccCChhhcCCeeeccccCCCCCCc---hhhhHHHHHH
Confidence 1223457899999999984 22333 3355666664
No 270
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.94 E-value=1.2e-27 Score=269.48 Aligned_cols=187 Identities=25% Similarity=0.285 Sum_probs=152.8
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCC-----Ce
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE-----EF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 850 (982)
..++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3568999999999999999999864 68999999997433 33457788999999999999999999998654 36
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.++||||++ |+|.+++... .+++.++..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 899999997 5999988754 4899999999999999999999 999999999999999999999999999999876
Q ss_pred cCCCCc-eeecccccccccccCceeeee-eeeeEEeeEeeeeeee
Q 036229 931 IGEDQS-ITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~~ 973 (982)
...... .......||+.|+|||++.+. .++. .+|+|++|+
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~DiwslG~ 220 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK---SIDIWSVGC 220 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCST---HHHHHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCc---chhHHHHHH
Confidence 432211 112446899999999987543 3443 345566653
No 271
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.94 E-value=4.3e-27 Score=262.83 Aligned_cols=203 Identities=25% Similarity=0.372 Sum_probs=160.5
Q ss_pred CHHHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhh--cCCccceeEEeeecCC
Q 036229 771 SYLELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKS--IRHRNLIKVISSCSTE 848 (982)
Q Consensus 771 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~ 848 (982)
.........++|++.+.||+|+||.||+|+. +++.||||++... ....+.+|+++++. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3334445667899999999999999999998 5899999998643 34567788998887 7999999999999877
Q ss_pred C----eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc-----CCCCeEEcCCCCCCEEEcCCCcE
Q 036229 849 E----FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG-----YSAPVIHCDLKPSNVLLDDNMVA 919 (982)
Q Consensus 849 ~----~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~ 919 (982)
+ ..++||||+++|+|.+++.+. .+++.++..++.|++.||+|||.. +++||+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 789999999999999999764 489999999999999999999921 15799999999999999999999
Q ss_pred EEEeecCceeecCCCCce--eecccccccccccCceeeeeeee---eEEeeEeeeeee--eeecccC
Q 036229 920 HLSDFGIAKLLIGEDQSI--TQTQTLATIGYMAPGLFHVKYIL---FVVNFLTSYSFL--MIFIGRG 979 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~---~~~~~~d~~~~~--~~l~~~~ 979 (982)
||+|||++.......... ......||+.|+|||++.+.... .....+|+|++| ++.+.+|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg 253 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence 999999998775443221 23456799999999998664211 111234555555 4555544
No 272
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.94 E-value=6e-28 Score=269.55 Aligned_cols=186 Identities=26% Similarity=0.301 Sum_probs=151.4
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc-chhhhhHHHHHHH-hhhcCCccceeEEeeecCCCeeEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC-GRAFKSFDVECEM-MKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
..++|++.+.||+|+||.||+|+. .+++.||||+++... .....++..|..+ ++.++||||+++++++..++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 456889999999999999999986 569999999997542 3334555666665 7788999999999999999999999
Q ss_pred EEeccCCChHHHHhc---CCCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 855 LEYMPHGSLEKSLYS---SNYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
|||+++ +|.+++.. ....+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999975 99888764 4557899999999999999999999 87 9999999999999999999999999999875
Q ss_pred cCCCCceeecccccccccccCceeeee----eeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVK----YILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~~~~d~~~~~~ 973 (982)
.. ........||+.|+|||++.+. .++ ..+|+|++|+
T Consensus 205 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~---~~~Di~slG~ 245 (340)
T 3an0_A 205 VD---SVAKTIDAGCKPYMAPERINPELNQKGYS---VKSDIWSLGI 245 (340)
T ss_dssp SC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCC---HHHHHHHHHH
T ss_pred cc---ccccccCCCCccccCccccccccccCCCC---chhhHHHHHH
Confidence 22 1222345799999999997532 333 3355666663
No 273
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.1e-27 Score=267.14 Aligned_cols=192 Identities=22% Similarity=0.251 Sum_probs=140.5
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeee--------cC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSC--------ST 847 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~--------~~ 847 (982)
...+|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.+++++. ||||+++++++ ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 3458999999999999999999964 68999999987666666778899999999996 99999999998 34
Q ss_pred CCeeEEEEEeccCCChHHHHhc--CCCcCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEcCCCcEEEEe
Q 036229 848 EEFKALILEYMPHGSLEKSLYS--SNYILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLDDNMVAHLSD 923 (982)
Q Consensus 848 ~~~~~lv~E~~~~gsL~~~l~~--~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~~~~~~kL~D 923 (982)
....++||||++ |+|.+++.. ....+++.++..++.|++.||+||| ++| |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 456899999995 699988864 3446899999999999999999999 999 99999999999999999999999
Q ss_pred ecCceeecCCCCce----------eecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 924 FGIAKLLIGEDQSI----------TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 924 FGla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
||+++......... ......||+.|+|||++........+..+|+|++|+
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~ 241 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC 241 (337)
T ss_dssp CTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHH
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHH
Confidence 99998764322111 112456899999999984221111223455666663
No 274
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.94 E-value=2.3e-27 Score=259.22 Aligned_cols=186 Identities=23% Similarity=0.307 Sum_probs=154.1
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeee-cCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSC-STEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+. .+++.||+|++.... ..+++.+|+++++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 57899999999999999999996 569999999987543 335788999999999988866655554 66778899999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceeecCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~ 933 (982)
|+ +++|.+++......+++..+..++.|++.||+||| ++||+||||||+||++ ++++.+||+|||++......
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 89999999866667999999999999999999999 9999999999999999 47889999999999976543
Q ss_pred CCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 934 DQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 934 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 203 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGY 203 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHH
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcc---hhhHHHHH
Confidence 321 12245679999999999987665543 45566663
No 275
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=8.5e-28 Score=262.98 Aligned_cols=187 Identities=22% Similarity=0.350 Sum_probs=154.2
Q ss_pred CCCccceeeeeceEEEEEEEeC-C---CeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCee-EEE
Q 036229 781 RFSENNLIGRGGFGSVYKARIG-E---GMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK-ALI 854 (982)
Q Consensus 781 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~lv 854 (982)
.|...+.||+|+||.||+|++. + +..||+|+++... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4666799999999999999842 2 3479999987543 34457889999999999999999999999776655 999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||+.+|+|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999887777899999999999999999999 9999999999999999999999999999998653322
Q ss_pred --CceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 935 --QSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.........+|+.|+|||.+.+..++.. +|+|++|+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 216 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTK---SDVWSFGV 216 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHH---HHHHHHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChh---hchhhHHH
Confidence 1122334568899999999977665543 45666663
No 276
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.94 E-value=3.4e-28 Score=263.39 Aligned_cols=187 Identities=24% Similarity=0.341 Sum_probs=153.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeee--cCCCeeEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSC--STEEFKAL 853 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~~l 853 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++ ...+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999865 68999999997542 34456789999999999999999999987 44678999
Q ss_pred EEEeccCCChHHHHhcC---CCcCCHHHHHHHHHHHHHHHHHHHccCCCC-----eEEcCCCCCCEEEcCCCcEEEEeec
Q 036229 854 ILEYMPHGSLEKSLYSS---NYILDIFQRLNIMVDVATTLEYLHFGYSAP-----VIHCDLKPSNVLLDDNMVAHLSDFG 925 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~kL~DFG 925 (982)
||||+++++|.+++... ...+++..+..++.|++.||+||| ++| |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 334899999999999999999999 888 9999999999999999999999999
Q ss_pred CceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 926 IAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 926 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.+....... .......||+.|+|||++.+..++.. +|+|++|+
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 204 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEK---SDIWSLGC 204 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHH---HHHHHHHH
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCch---hhHHHHHH
Confidence 998653221 12234578999999999977655533 55666664
No 277
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.94 E-value=1e-27 Score=272.73 Aligned_cols=180 Identities=27% Similarity=0.412 Sum_probs=143.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCC------CeeE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE------EFKA 852 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~ 852 (982)
..+|++.+.||+|+||.||+|+...+..||+|++.... ....+|+++++.++||||+++++++... ...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 45799999999999999999998777779999886432 2224699999999999999999998443 3478
Q ss_pred EEEEeccCCChHHHHh---cCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEEEeecCce
Q 036229 853 LILEYMPHGSLEKSLY---SSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFGIAK 928 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~ 928 (982)
+||||++++ +.+.+. .....+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 999999774 433332 23456899999999999999999999 99999999999999999 79999999999998
Q ss_pred eecCCCCceeecccccccccccCceeeeee-eeeEEeeEeeeeee
Q 036229 929 LLIGEDQSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFL 972 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~ 972 (982)
...... ......||+.|+|||++.+.. ++.. +|+|++|
T Consensus 191 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwSlG 229 (394)
T 4e7w_A 191 ILIAGE---PNVSYICSRYYRAPELIFGATNYTTN---IDIWSTG 229 (394)
T ss_dssp ECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTH---HHHHHHH
T ss_pred cccCCC---CCcccccCcCccCHHHHcCCCCCCcH---HHHHHHH
Confidence 763322 233567899999999986543 4433 4455555
No 278
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.94 E-value=6.8e-28 Score=263.90 Aligned_cols=186 Identities=27% Similarity=0.364 Sum_probs=152.8
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|+++... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 368999999999999999999865 68999999986542 233467889999999999999999999999999999999
Q ss_pred EeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 856 EYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
||++ ++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 59999987653 45889999999999999999999 9999999999999999999999999999998753221
Q ss_pred CceeecccccccccccCceeeeee-eeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~ 973 (982)
.......||+.|+|||++.+.. ++ ..+|+|++|+
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~ 192 (299)
T 2r3i_A 158 --RTYTHEVVTLWYRAPEILLGAKYYS---TAVDIWSLGC 192 (299)
T ss_dssp --BCTTSCBCCCTTCCHHHHTTCSSCC---THHHHHHHHH
T ss_pred --cccCcccccccccCcHHhhccccCC---hHHHHHHHHH
Confidence 2233457899999999986643 33 2345666663
No 279
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.94 E-value=7.6e-28 Score=262.38 Aligned_cols=188 Identities=26% Similarity=0.361 Sum_probs=147.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeC--CC--eEEEEEEeecc---cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG--EG--MEVAVKVFDLQ---CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 851 (982)
.++|++.+.||+|+||.||+|++. ++ ..||+|+++.. .....+++.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467999999999999999999852 23 36899998654 2345678899999999999999999999998765 8
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||+++++|.+++......+++..+..++.|++.||.||| ++||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876667899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCce-eecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 932 GEDQSI-TQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
...... ......+|+.|+|||++.+..++. ..|+|++|+
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~ 212 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSH---ASDTWMFGV 212 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEH---HHHHHHHHH
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCc---hhhHHHHHH
Confidence 433222 223456788999999997765543 355666664
No 280
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.6e-27 Score=278.31 Aligned_cols=234 Identities=17% Similarity=0.163 Sum_probs=137.8
Q ss_pred CCCEEEeccccCccccCCccccCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCcccccccccc
Q 036229 372 KLSVLELGRNSFSGFIPNTFGNLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHS 451 (982)
Q Consensus 372 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 451 (982)
+|++|+|++|.+++..|..|..+++|+.|++++|.++... .|..+++|++|+|++|.++++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------~l~~l~~L~~L~Ls~N~l~~l------------ 95 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTLDLNNNYVQEL------------ 95 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEE-------ECTTCTTCCEEECCSSEEEEE------------
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCc-------ccccCCCCCEEEecCCcCCCC------------
Confidence 5666666666666655555555555555555555443211 134444444555555432211
Q ss_pred ccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccC
Q 036229 452 LEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSG 531 (982)
Q Consensus 452 L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 531 (982)
. ..++|+.|++++|.+++..+.. +++|+.|+|++|.|++..|..|..+++|+.|+|++
T Consensus 96 --------------~-----~~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (487)
T 3oja_A 96 --------------L-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (487)
T ss_dssp --------------E-----ECTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTT
T ss_pred --------------C-----CCCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCC
Confidence 1 1145556666666665544332 34555555555555555555555555555555555
Q ss_pred CcCCcCCCcccc-CCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeeccccccccccc
Q 036229 532 NKLSGSIPACFS-NLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIP 610 (982)
Q Consensus 532 N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p 610 (982)
|+|++..|..|. .+++|++|+|++|.++.+|. ...+++|+.|||++|.|++.+|
T Consensus 154 N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-------------------------~~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-------------------------QVVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-------------------------CCCCTTCCEEECCSSCCCEECG
T ss_pred CCCCCcChHHHhhhCCcccEEecCCCccccccc-------------------------cccCCCCCEEECCCCCCCCCCH
Confidence 555554444443 44555555555555444332 2235667777777777766444
Q ss_pred ccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCC-CCCCcccccccccceeecC
Q 036229 611 TVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLS-RSIPISLEKLSYLEDLDLS 673 (982)
Q Consensus 611 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~l~ls 673 (982)
.++.+++|+.|+|++|+|++ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 209 -~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 209 -EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp -GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred -hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 47778888888888888874 6777888888888888888887 5667777788888888776
No 281
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.94 E-value=2e-27 Score=258.98 Aligned_cols=183 Identities=26% Similarity=0.378 Sum_probs=151.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecC----CCee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCST----EEFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 851 (982)
...|.+.+.||+|+||.||+|... ++..||+|++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 345788899999999999999864 5889999998754 23446778999999999999999999998754 4568
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCC--eEEcCCCCCCEEEc-CCCcEEEEeecCce
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAP--VIHCDLKPSNVLLD-DNMVAHLSDFGIAK 928 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~kL~DFGla~ 928 (982)
++||||+++++|.+++... ..+++..+..++.|++.||.||| +++ |+||||||+||+++ +++.+||+|||++.
T Consensus 105 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 9999999999999999764 34889999999999999999999 888 99999999999997 78999999999997
Q ss_pred eecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 929 LLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..... ......||+.|+|||++.+. ++ ...|+|++|+
T Consensus 181 ~~~~~----~~~~~~~t~~y~aPE~~~~~-~~---~~~Di~slG~ 217 (290)
T 1t4h_A 181 LKRAS----FAKAVIGTPEFMAPEMYEEK-YD---ESVDVYAFGM 217 (290)
T ss_dssp GCCTT----SBEESCSSCCCCCGGGGGTC-CC---THHHHHHHHH
T ss_pred ccccc----ccccccCCcCcCCHHHHhcc-CC---CcchHHHHHH
Confidence 54222 22345799999999998754 33 3355666663
No 282
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.94 E-value=8.1e-28 Score=271.76 Aligned_cols=183 Identities=10% Similarity=0.112 Sum_probs=133.3
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccc---hhhhhHHHHHHHhhhc--CCccceeEEe-------ee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG---RAFKSFDVECEMMKSI--RHRNLIKVIS-------SC 845 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~nIv~l~~-------~~ 845 (982)
..+|+..+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+++++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345889999999999999999964 699999999986432 3455677885554444 6999888653 33
Q ss_pred cCC-----------------CeeEEEEEeccCCChHHHHhcCCCcCCHHHH------HHHHHHHHHHHHHHHccCCCCeE
Q 036229 846 STE-----------------EFKALILEYMPHGSLEKSLYSSNYILDIFQR------LNIMVDVATTLEYLHFGYSAPVI 902 (982)
Q Consensus 846 ~~~-----------------~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~------~~i~~qi~~~L~yLH~~~~~~iv 902 (982)
..+ ...|+||||++ |+|.+++...+...++..+ ..++.|++.||+||| ++||+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 222 34799999998 8999999865444455555 677899999999999 99999
Q ss_pred EcCCCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCceeee--eeeeeEEeeEeeeeeee
Q 036229 903 HCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHV--KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 903 HrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~~~~d~~~~~~ 973 (982)
||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++ ..+|+|++|+
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~---~~~DiwSlG~ 281 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFT---HALNAWQLGL 281 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECC---HHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcC---ccccHHHHHH
Confidence 999999999999999999999999996521 1124567799999999976 4444 3355666663
No 283
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.94 E-value=4.2e-28 Score=272.07 Aligned_cols=183 Identities=14% Similarity=0.168 Sum_probs=150.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeCC---------CeEEEEEEeecccchhhhhHHHHHHHhhhcCCcccee---------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGE---------GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIK--------- 840 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~--------- 840 (982)
.++|++.+.||+|+||.||+|+... ++.||+|+++.. +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4689999999999999999998653 789999998743 56889999999999999988
Q ss_pred ------EEeeecC-CCeeEEEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 036229 841 ------VISSCST-EEFKALILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 841 ------l~~~~~~-~~~~~lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NIL 912 (982)
+++++.. ++..++||||+ +++|.+++... ...+++.++..++.|++.||+||| ++||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666654 67889999999 99999999865 356899999999999999999999 999999999999999
Q ss_pred EcCCC--cEEEEeecCceeecCCCCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 913 LDDNM--VAHLSDFGIAKLLIGEDQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 913 l~~~~--~~kL~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
++.++ .+||+|||+|+.+...... .......||+.|+|||++.+..++. .+|+|++|+
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~ 256 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSR---RSDLQSLGY 256 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCH---HHHHHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCc---hhhHHHHHH
Confidence 99988 9999999999876432211 1123457999999999997765554 355666664
No 284
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.94 E-value=1.4e-27 Score=273.93 Aligned_cols=179 Identities=27% Similarity=0.426 Sum_probs=142.8
Q ss_pred cCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecC------CCeeE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCST------EEFKA 852 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~~ 852 (982)
.+|+..+.||+|+||.||+|++. +++.||||++.... ....+|+++++.++||||+++++++.. ..+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999975 59999999986432 223479999999999999999998743 22467
Q ss_pred EEEEeccCCChHHHHh---cCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-CcEEEEeecCce
Q 036229 853 LILEYMPHGSLEKSLY---SSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN-MVAHLSDFGIAK 928 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~ 928 (982)
+||||+++ ++.+.+. .....+++..+..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 6666554 34556899999999999999999999 9999999999999999955 678999999999
Q ss_pred eecCCCCceeecccccccccccCceeeee-eeeeEEeeEeeeeee
Q 036229 929 LLIGEDQSITQTQTLATIGYMAPGLFHVK-YILFVVNFLTSYSFL 972 (982)
Q Consensus 929 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~d~~~~~ 972 (982)
.+.... ......||+.|+|||++.+. .++.. +|+|++|
T Consensus 206 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwSlG 244 (420)
T 1j1b_A 206 QLVRGE---PNVSYICSRYYRAPELIFGATDYTSS---IDVWSAG 244 (420)
T ss_dssp ECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTH---HHHHHHH
T ss_pred hcccCC---CceeeeeCCCcCCHHHHcCCCCCCch---hhhHHHH
Confidence 764322 22356789999999998654 34433 4455555
No 285
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.94 E-value=2.2e-28 Score=268.24 Aligned_cols=192 Identities=23% Similarity=0.332 Sum_probs=139.1
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
....++|++.+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++||||+++++++..++..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34568899999999999999999985 468999999986442 3345678899999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhc-------CCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecC
Q 036229 854 ILEYMPHGSLEKSLYS-------SNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGI 926 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGl 926 (982)
||||+++++|.+++.. ....+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999874 2445899999999999999999999 99999999999999999999999999999
Q ss_pred ceeecCCCC---ceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 927 AKLLIGEDQ---SITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 927 a~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
+........ ........||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~~Di~slG~ 215 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF---KADIWSFGI 215 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCT---HHHHHHHHH
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCc---hhhHHHHHH
Confidence 986533211 112234579999999999865 33332 345666663
No 286
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1.8e-26 Score=249.29 Aligned_cols=210 Identities=25% Similarity=0.247 Sum_probs=143.9
Q ss_pred ccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccC
Q 036229 475 NLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLG 554 (982)
Q Consensus 475 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 554 (982)
+|+.|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555555555555666666666666655555555566666666666666665555556666666666666
Q ss_pred CCccccccc-ccccccCceEEecCCCcccCC-CccccccccccceeecccccccccccccccCccCcc----eEeccccc
Q 036229 555 SNKLTSIPL-TIWNLKGMLYLNFSSNFFTGP-LPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQ----YLFLGYNR 628 (982)
Q Consensus 555 ~N~l~~ip~-~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~ 628 (982)
+|+++.++. .+..+++|++|++++|.+++. +|..++++++|+.|++++|++++..+..+..+++|+ +|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 666665544 344566666666666666653 466777777777888888888777777777777777 88899999
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCCC
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGG 685 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~ 685 (982)
+++..+..+.. .+|+.|+|++|++++..+..+..+++|++|++++|++.|.+|.-.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~ 244 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 244 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTH
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchH
Confidence 98666655554 489999999999987766677889999999999999998887643
No 287
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=3.8e-27 Score=275.10 Aligned_cols=233 Identities=22% Similarity=0.239 Sum_probs=144.3
Q ss_pred CCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEe
Q 036229 130 TLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSL 209 (982)
Q Consensus 130 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 209 (982)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD---LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE---CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc---cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 67777777777776666677777777777777777765444 4667777777777777765432 266777777
Q ss_pred eccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhh-ccCCCcEEEccCCcccc
Q 036229 210 SINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELA-NLTGLEVLKLGKNFLTG 288 (982)
Q Consensus 210 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~ 288 (982)
++|++++..+.. +++|++|+|++|++++..|..|+++++|+.|++++|.+++..|..+. .+++|++|+|++|.|++
T Consensus 107 ~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 777777554432 35566666666666666666666666666666666666665555554 56666666666666665
Q ss_pred CCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCccccccccccc
Q 036229 289 EIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIF 368 (982)
Q Consensus 289 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 368 (982)
..+ +..+++|++|+|++|++++..| .+..++ +|+.|+|++|++++ +|..+.
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~-------------------------~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAA-------------------------GVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCEECG-GGGGGT-------------------------TCSEEECTTSCCCE-ECTTCC
T ss_pred ccc--cccCCCCCEEECCCCCCCCCCH-hHcCCC-------------------------CccEEEecCCcCcc-cchhhc
Confidence 422 2245666666666666654333 243333 34556666666653 455566
Q ss_pred CCCCCCEEEeccccCc-cccCCccccCCccceecc
Q 036229 369 NASKLSVLELGRNSFS-GFIPNTFGNLRNLRLMTL 402 (982)
Q Consensus 369 ~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~L 402 (982)
.+++|+.|++++|.+. +.+|..+..++.|+.+++
T Consensus 235 ~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp CCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred cCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 6677777777777776 444555555555554443
No 288
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.94 E-value=1.5e-27 Score=264.66 Aligned_cols=193 Identities=19% Similarity=0.271 Sum_probs=156.4
Q ss_pred HHHHHHHhcCCCcc-ceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhc-CCccceeEEeeec
Q 036229 772 YLELCRATNRFSEN-NLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSI-RHRNLIKVISSCS 846 (982)
Q Consensus 772 ~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 846 (982)
+...+...++|.+. +.||+|+||.||+|+.. +++.||+|+++... ......+.+|+.+++.+ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33445566778877 89999999999999865 58999999997542 23356788999999999 5699999999999
Q ss_pred CCCeeEEEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEE
Q 036229 847 TEEFKALILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLS 922 (982)
Q Consensus 847 ~~~~~~lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~ 922 (982)
..+..++||||+++|+|.+++... ...+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~ 176 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIV 176 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEEC
T ss_pred eCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEe
Confidence 999999999999999999998643 356899999999999999999999 999999999999999987 7899999
Q ss_pred eecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 923 DFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 923 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|||+++...... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 177 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 221 (327)
T 3lm5_A 177 DFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTA---TDMWNIGI 221 (327)
T ss_dssp CGGGCEEC------------CCCGGGCCHHHHTTCCCCTH---HHHHHHHH
T ss_pred eCccccccCCcc---ccccccCCcCccCCeeecCCCCCch---hhHHHHHH
Confidence 999999763222 2234679999999999977665543 45566663
No 289
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.94 E-value=7.2e-28 Score=260.70 Aligned_cols=182 Identities=29% Similarity=0.408 Sum_probs=146.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCC-CeeEEEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE-EFKALILE 856 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-~~~~lv~E 856 (982)
..++|++.+.||+|+||.||+|+. +++.||+|+++... ..+.+.+|++++++++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 357899999999999999999987 48999999987442 456789999999999999999999987554 57899999
Q ss_pred eccCCChHHHHhcCCC-cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC
Q 036229 857 YMPHGSLEKSLYSSNY-ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ 935 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 935 (982)
|+++++|.+++..... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 9999999999975432 3788899999999999999999 999999999999999999999999999999865322
Q ss_pred ceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 936 SITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 936 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.....+++.|+|||++.+..++.. +|+|++|+
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 202 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGI 202 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHH---HHHHHHHH
T ss_pred ---ccCCCccccccCHHHhCCCCCCch---hcHHHHHH
Confidence 123457889999999976655543 55666664
No 290
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.94 E-value=2.3e-27 Score=267.79 Aligned_cols=182 Identities=25% Similarity=0.274 Sum_probs=143.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCC------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE------ 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 849 (982)
.++|++.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 468999999999999999999864 5899999999753 2344567889999999999999999999987654
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78888753 3789999999999999999999 99999999999999999999999999999986
Q ss_pred ecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
... ........||+.|+|||++.+..++.. +|+|++|+
T Consensus 177 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~ 214 (371)
T 2xrw_A 177 AGT---SFMMTPYVVTRYYRAPEVILGMGYKEN---VDIWSVGC 214 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTT---HHHHHHHH
T ss_pred ccc---ccccCCceecCCccCHHHhcCCCCCch---HhHHHHHH
Confidence 532 122345679999999999977655543 55566663
No 291
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.94 E-value=9.7e-28 Score=261.39 Aligned_cols=186 Identities=25% Similarity=0.258 Sum_probs=139.6
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccc--hhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCG--RAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|+++.... ...+.+..+...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999986 4699999999975422 2223344455557888999999999999999999999
Q ss_pred EEeccCCChHHHHhc---CCCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 855 LEYMPHGSLEKSLYS---SNYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
|||+++ ++.+++.. ....+++..+..++.|++.||+||| ++ ||+||||||+||+++.++.+||+|||+|+..
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999974 88777653 4556899999999999999999999 87 9999999999999999999999999999876
Q ss_pred cCCCCceeecccccccccccCceee----eeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFH----VKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~~~d~~~~~~ 973 (982)
... .......||+.|+|||++. +..++ ..+|+|++|+
T Consensus 161 ~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~---~~~Di~slG~ 201 (290)
T 3fme_A 161 VDD---VAKDIDAGCKPYMAPERINPELNQKGYS---VKSDIWSLGI 201 (290)
T ss_dssp ------------CCCCCCSCHHHHSCCTTC--CC---HHHHHHHHHH
T ss_pred ccc---ccccccCCCccccChhhcChhhcCcCCC---cHHHHHHHHH
Confidence 332 2223457999999999973 33333 3355666664
No 292
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.94 E-value=6.1e-28 Score=271.48 Aligned_cols=181 Identities=25% Similarity=0.319 Sum_probs=134.4
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCC------C
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTE------E 849 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 849 (982)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 47899999999999999999985 46999999998643 233456788999999999999999999998654 5
Q ss_pred eeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..|+||||+ +++|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 7899998865 35899999999999999999999 99999999999999999999999999999986
Q ss_pred ecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
... ......||+.|+|||++.+ ..++.. +|+|++|+
T Consensus 182 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~---~DiwslG~ 218 (367)
T 2fst_X 182 TAD-----EMTGYVATRWYRAPEIMLNWMHYNQT---VDIWSVGC 218 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTT---HHHHHHHH
T ss_pred ccc-----cCCCcCcCcCccChHHHcCCcCCCch---hhHHHHHH
Confidence 532 1345679999999999865 344433 45556553
No 293
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.94 E-value=7.5e-28 Score=265.29 Aligned_cols=189 Identities=24% Similarity=0.302 Sum_probs=146.1
Q ss_pred HHHHHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccc------hhhhhHHHHHHHhhhc----CCccceeEE
Q 036229 774 ELCRATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCG------RAFKSFDVECEMMKSI----RHRNLIKVI 842 (982)
Q Consensus 774 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~nIv~l~ 842 (982)
+.....++|++.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+++++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 4455678899999999999999999985 4689999999965422 2334566799999998 899999999
Q ss_pred eeecCCCeeEEEEEe-ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEE
Q 036229 843 SSCSTEEFKALILEY-MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAH 920 (982)
Q Consensus 843 ~~~~~~~~~~lv~E~-~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~~k 920 (982)
+++...+..++|||| +.+++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999997644 4899999999999999999999 99999999999999999 889999
Q ss_pred EEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 921 LSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 921 L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
|+|||++...... ......||+.|+|||++.+..+... .+|+|++|
T Consensus 181 l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~--~~Di~slG 226 (312)
T 2iwi_A 181 LIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHAL--PATVWSLG 226 (312)
T ss_dssp ECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHH--HHHHHHHH
T ss_pred EEEcchhhhcccC----cccccCCcccccCceeeecCCCCCc--cchHHHHH
Confidence 9999999876432 2234669999999999866544321 24556655
No 294
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.94 E-value=1.7e-27 Score=286.11 Aligned_cols=181 Identities=24% Similarity=0.350 Sum_probs=145.1
Q ss_pred ceeeeeceEEEEEEEe---CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEEEeccC
Q 036229 786 NLIGRGGFGSVYKARI---GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALILEYMPH 860 (982)
Q Consensus 786 ~~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~E~~~~ 860 (982)
+.||+|+||.||+|.+ ..++.||||+++... ....+++.+|++++++++||||+++++++..+ ..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 5799999999999964 246889999997542 23457899999999999999999999999754 57899999999
Q ss_pred CChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCCC-ceee
Q 036229 861 GSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQ-SITQ 939 (982)
Q Consensus 861 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~ 939 (982)
|+|.+++... ..+++..+..++.||+.||+||| ++|||||||||+||+++.++.+||+|||+|+.+..... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999754 45899999999999999999999 99999999999999999999999999999987643322 1222
Q ss_pred cccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 940 TQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 940 ~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
....+|+.|+|||++.+..++.. +|+|++|++
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~---sDvwSlGv~ 561 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSK---SDVWSFGVL 561 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHH---HHHHHHHHH
T ss_pred cCCCCceeeeChhhhcCCCCCcH---HHHHHHHHH
Confidence 34457889999999977666543 556666643
No 295
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.94 E-value=4.5e-28 Score=267.23 Aligned_cols=181 Identities=21% Similarity=0.371 Sum_probs=145.6
Q ss_pred CCHHHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecc--cchhhhhHHHHHHHhhhcC--CccceeEEeee
Q 036229 770 FSYLELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIR--HRNLIKVISSC 845 (982)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~ 845 (982)
+.+..+....++|++.+.||+|+||.||+|+..+++.||+|++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3333344456789999999999999999999888999999999754 2345678899999999997 59999999999
Q ss_pred cCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 036229 846 STEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 925 (982)
Q Consensus 846 ~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFG 925 (982)
..++..++||| +.+++|.+++.... .+++..+..++.|++.||.||| ++||+||||||+||++++ +.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecc
Confidence 99999999999 55789999997654 5889999999999999999999 999999999999999964 899999999
Q ss_pred CceeecCCCCceeecccccccccccCceeee
Q 036229 926 IAKLLIGEDQSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 926 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
++................||+.|+|||++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 202 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202 (313)
T ss_dssp SSCC--------------CCGGGCCHHHHTT
T ss_pred ccccccCccccccccCCCCCCCcCCHHHHhh
Confidence 9987644333333345679999999999864
No 296
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.94 E-value=3.8e-27 Score=273.05 Aligned_cols=185 Identities=20% Similarity=0.250 Sum_probs=154.3
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCC-ccceeEEeeecCCCeeEEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRH-RNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~lv~E 856 (982)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ...++..|+++++.++| ++|..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 47899999999999999999986 569999999987543 23568899999999977 566666667778889999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE---cCCCcEEEEeecCceeecCC
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---DDNMVAHLSDFGIAKLLIGE 933 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~ 933 (982)
|+ +++|.+++......+++.++..|+.||+.||+||| ++|||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 89999999876677999999999999999999999 9999999999999999 58889999999999987543
Q ss_pred CCc-----eeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 934 DQS-----ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 934 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
... .......||+.|+|||++.+..++.. .|+|++|
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~---sDvwSlG 200 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRR---DDLESLG 200 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChH---HHHHHHH
Confidence 321 12235679999999999987766544 4455555
No 297
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.94 E-value=2.3e-27 Score=270.99 Aligned_cols=182 Identities=22% Similarity=0.250 Sum_probs=150.2
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcC--------CccceeEEeeec---
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR--------HRNLIKVISSCS--- 846 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~--- 846 (982)
.++|++.+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+++++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 47899999999999999999985 45899999999743 344577889999999985 788999999987
Q ss_pred -CCCeeEEEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCC------
Q 036229 847 -TEEFKALILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNM------ 917 (982)
Q Consensus 847 -~~~~~~lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~------ 917 (982)
.....++||||+ ++++.+.+... ...+++..+..++.||+.||+||| ++ ||+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 55666666543 356899999999999999999999 88 999999999999999775
Q ss_pred -------------------------------------------cEEEEeecCceeecCCCCceeecccccccccccCcee
Q 036229 918 -------------------------------------------VAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLF 954 (982)
Q Consensus 918 -------------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 954 (982)
.+||+|||.|...... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999875321 2345799999999999
Q ss_pred eeeeeeeEEeeEeeeeeee
Q 036229 955 HVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 955 ~~~~~~~~~~~~d~~~~~~ 973 (982)
.+..++.. +|+|++|+
T Consensus 266 ~~~~~~~~---~DiwslG~ 281 (397)
T 1wak_A 266 IGSGYNTP---ADIWSTAC 281 (397)
T ss_dssp HTSCCCTH---HHHHHHHH
T ss_pred cCCCCCcH---HHHHHHHH
Confidence 87766544 45566653
No 298
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.93 E-value=1.2e-27 Score=273.75 Aligned_cols=184 Identities=22% Similarity=0.301 Sum_probs=134.7
Q ss_pred cCCCc-cceeeeeceEEEEEEEeC---CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeee--cCCCeeEE
Q 036229 780 NRFSE-NNLIGRGGFGSVYKARIG---EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSC--STEEFKAL 853 (982)
Q Consensus 780 ~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~~l 853 (982)
+.|++ +++||+|+||.||+|+.. +++.||+|+++... ....+.+|++++++++||||+++++++ ......++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 44655 568999999999999864 47899999987432 235688999999999999999999999 45778999
Q ss_pred EEEeccCCChHHHHhcC--------CCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----cCCCcEEE
Q 036229 854 ILEYMPHGSLEKSLYSS--------NYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL----DDNMVAHL 921 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl----~~~~~~kL 921 (982)
||||++ ++|.+++... ...+++..++.++.||+.||+||| ++||+||||||+||++ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999996 4888877522 124889999999999999999999 9999999999999999 67789999
Q ss_pred EeecCceeecCCCC-ceeecccccccccccCceeeeee-eeeEEeeEeeeeee
Q 036229 922 SDFGIAKLLIGEDQ-SITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFL 972 (982)
Q Consensus 922 ~DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~ 972 (982)
+|||+|+.+..... ........||+.|+|||++.+.. ++.. +|+|++|
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~---~DiwSlG 223 (405)
T 3rgf_A 174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKA---IDIWAIG 223 (405)
T ss_dssp CCTTCCC----------------CCCTTCCHHHHTTCCSCCHH---HHHHHHH
T ss_pred EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccch---hhhHHHH
Confidence 99999987643221 12234567999999999997643 4433 4455555
No 299
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.93 E-value=2.6e-27 Score=261.90 Aligned_cols=186 Identities=25% Similarity=0.327 Sum_probs=146.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeec-----------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCS----------- 846 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----------- 846 (982)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+++.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 468999999999999999999975 49999999998766666788999999999999999999999873
Q ss_pred ---CCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEEE
Q 036229 847 ---TEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLS 922 (982)
Q Consensus 847 ---~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kL~ 922 (982)
..+..++||||++ |+|.+++.. ..+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 599999864 34889999999999999999999 99999999999999997 56799999
Q ss_pred eecCceeecCCCC-ceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 923 DFGIAKLLIGEDQ-SITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 923 DFGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
|||+++....... ........+|+.|+|||++.+ ..++. .+|+|++|+
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~~Di~slG~ 213 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK---AIDMWAAGC 213 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCH---HHHHHHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCc---hhhhHhHHH
Confidence 9999987532211 122234567999999999854 33433 345566663
No 300
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.93 E-value=4.5e-27 Score=263.93 Aligned_cols=186 Identities=24% Similarity=0.306 Sum_probs=150.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHHHhhhcCCccceeEEeeecCC-----Cee
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECEMMKSIRHRNLIKVISSCSTE-----EFK 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 851 (982)
.++|++.+.||+|+||.||+|+.. +++.||||+++... .....++.+|++++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 578999999999999999999865 59999999996432 33456788999999999999999999987654 678
Q ss_pred EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeec
Q 036229 852 ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLI 931 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 931 (982)
++||||++ ++|.+++... .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999996 5999988763 4899999999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCce--------eecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 932 GEDQSI--------TQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 932 ~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
...... ......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~Di~slG~ 211 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSR---AMDVWSCGC 211 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCH---HHHHHHHHH
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccc---hhhHHHHHH
Confidence 321111 1223578999999998754 33433 355666664
No 301
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.93 E-value=2.9e-27 Score=285.25 Aligned_cols=188 Identities=24% Similarity=0.349 Sum_probs=153.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC----CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG----EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
..++|++.+.||+|+||.||+|++. .+..||+|+++.. .....+.+.+|+.++++++||||+++++++. ++..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 3467999999999999999999863 2578999998654 3344578899999999999999999999985 45689
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++|+|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999877667899999999999999999999 99999999999999999999999999999987633
Q ss_pred CCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 933 EDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 933 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.. ........+|+.|||||++.+..++.. +|+|++|+
T Consensus 544 ~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG~ 580 (656)
T 2j0j_A 544 ST-YYKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGV 580 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHH---HHHHHHHH
T ss_pred Cc-ceeccCCCCCcceeCHHHhcCCCCCch---hhHHHHHH
Confidence 22 222234557889999999977665543 55666664
No 302
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.93 E-value=1.4e-27 Score=274.11 Aligned_cols=189 Identities=22% Similarity=0.370 Sum_probs=145.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEEEe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E~ 857 (982)
..+|...+.||+|+||+||.....+++.||||++.... ...+.+|+++++++ +||||+++++++.+.+..|+||||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 35688999999999999665555678999999986432 24467899999999 899999999999999999999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-----CCcEEEEeecCceeecC
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD-----NMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~kL~DFGla~~~~~ 932 (982)
++ |+|.+++........+.++..++.||+.||+||| ++||+||||||+||+++. ...+||+|||+|+....
T Consensus 100 ~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 100 CA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp CS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred CC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 96 5999999876655566667889999999999999 999999999999999953 23688999999987643
Q ss_pred CCCc-eeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 933 EDQS-ITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 933 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
.... .......||+.|+|||++.+......+..+|+|++|++
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~i 218 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHH
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHH
Confidence 3211 23345679999999999974322222334566777643
No 303
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.93 E-value=3.2e-27 Score=287.96 Aligned_cols=180 Identities=21% Similarity=0.316 Sum_probs=150.0
Q ss_pred hcCCCccceeeeeceEEEEEEEeC--CCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCe-----
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG--EGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF----- 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 850 (982)
.++|++.+.||+|+||.||+|++. +++.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999875 5899999998643 23445678899999999999999999999977654
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.|+||||+++++|.+++.. .+++.++..++.||+.||.||| ++|||||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999987754 5899999999999999999999 9999999999999999875 8999999999875
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMIF 975 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~l 975 (982)
... ....||+.|+|||++.+.+ +..+|+|++|+++
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~----~~~sDi~slG~~l 266 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP----TVATDIYTVGRTL 266 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS----CHHHHHHHHHHHH
T ss_pred ccC------CccCCCccccCHHHHcCCC----CCceehhhhHHHH
Confidence 322 3467999999999997654 3446677777443
No 304
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=2.7e-27 Score=279.99 Aligned_cols=164 Identities=19% Similarity=0.144 Sum_probs=125.7
Q ss_pred eeeeeceEEEEEEE-eCCCeEEEEEEeeccc----------chhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEE
Q 036229 787 LIGRGGFGSVYKAR-IGEGMEVAVKVFDLQC----------GRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 787 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv 854 (982)
..+.|+.|.++.++ ...|+.||+|++.... ....+++.+|+++|+++ .|+||+++++++++++..|+|
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 34566666666654 3358889999996541 23346799999999999 799999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
|||++|++|.+++.+.+ .++.. +|+.||+.||+|+| ++|||||||||+|||++++|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999997654 45543 58999999999999 9999999999999999999999999999999763322
Q ss_pred CceeecccccccccccCceeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHVKYI 959 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~~~~ 959 (982)
......+||+.|||||++.+...
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g~~~ 416 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAENKS 416 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC-----
T ss_pred --ccccCceechhhccHHHhCCCCC
Confidence 23345789999999999987643
No 305
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.93 E-value=5.6e-27 Score=269.44 Aligned_cols=183 Identities=21% Similarity=0.280 Sum_probs=153.1
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhc------CCccceeEEeeecCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSI------RHRNLIKVISSCSTEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~ 850 (982)
...+|++.+.||+|+||.||+|+.. +++.||||+++.. .....++.+|+++++.+ +|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 3567999999999999999999864 5899999999754 33446778899888877 57799999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc--EEEEeecCc
Q 036229 851 KALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV--AHLSDFGIA 927 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~--~kL~DFGla 927 (982)
.++||||++ ++|.+++.... ..+++..+..++.||+.||+||| ++||+||||||+||+++.++. +||+|||+|
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999996 69999887654 35899999999999999999999 999999999999999998887 999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+.... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 250 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~ 287 (429)
T 3kvw_A 250 CYEHQ-----RVYTYIQSRFYRAPEVILGARYGMP---IDMWSLGC 287 (429)
T ss_dssp EETTC-----CCCSSCSCGGGCCHHHHHTBCCCTH---HHHHHHHH
T ss_pred eecCC-----cccccCCCCCccChHHHhCCCCCch---HHHHhHHH
Confidence 86421 2234679999999999987766544 45566663
No 306
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.93 E-value=3.7e-27 Score=266.19 Aligned_cols=180 Identities=23% Similarity=0.302 Sum_probs=147.2
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCee----
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFK---- 851 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---- 851 (982)
.++|...+.||+|+||.||+|+.. +++.||||++... .....+++.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468999999999999999999864 5999999999754 233457788999999999999999999999877654
Q ss_pred --EEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 852 --ALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 852 --~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+|+.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 588887733 3899999999999999999999 99999999999999999999999999999986
Q ss_pred ecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
... ......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 194 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~---~~DiwslG~ 230 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQ---TVDIWSVGC 230 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCT---THHHHHHHH
T ss_pred ccc-----CcCCcccCccccCHHHhcCCCCCCc---HHhHHHHHH
Confidence 522 2235678999999999866 34443 345566663
No 307
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.93 E-value=7.1e-27 Score=260.63 Aligned_cols=183 Identities=20% Similarity=0.277 Sum_probs=153.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe--CCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc------ceeEEeeecCCCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI--GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN------LIKVISSCSTEEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 850 (982)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.. ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 35899999999743 344577889999999887654 9999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC--------------
Q 036229 851 KALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD-------------- 915 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~-------------- 915 (982)
.++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 889999987654 35789999999999999999999 999999999999999987
Q ss_pred -----CCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeeee
Q 036229 916 -----NMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLMI 974 (982)
Q Consensus 916 -----~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~~ 974 (982)
++.+||+|||+++..... .....||+.|+|||++.+..++.. +|+|++|++
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~i 223 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQP---CDVWSIGCI 223 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTH---HHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcc---hhhHHHHHH
Confidence 668999999999864221 234678999999999977665543 556666643
No 308
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=9.6e-26 Score=243.66 Aligned_cols=225 Identities=21% Similarity=0.181 Sum_probs=197.7
Q ss_pred EEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeec
Q 036229 428 YIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLED 507 (982)
Q Consensus 428 ~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 507 (982)
.++.++..+..++.. ++..+++|++++|++++..+..|.++++|+.|++++|++++..+..|.++++|++|+|++
T Consensus 11 ~~~c~~~~l~~ip~~-----l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 11 TYQCMELNFYKIPDN-----LPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp EEECTTSCCSSCCSS-----SCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred eEEecCCCccccCCC-----CCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 455556656555443 235688888888899888888899999999999999999988888999999999999999
Q ss_pred cCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccc--cccccccccCceEEecCCCcccCCC
Q 036229 508 NKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTS--IPLTIWNLKGMLYLNFSSNFFTGPL 585 (982)
Q Consensus 508 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--ip~~~~~l~~L~~L~Ls~N~l~~~~ 585 (982)
|++++..+..|.++++|++|++++|++++..+..+.++++|++|++++|+++. +|..+..+++|++|++++|++++..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 99998888899999999999999999998888789999999999999999996 6888899999999999999999888
Q ss_pred ccccccccccc----eeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCC
Q 036229 586 PLDIGNLKVLI----GIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIP 658 (982)
Q Consensus 586 ~~~~~~l~~L~----~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 658 (982)
+..+..++.|+ .|++++|.+++..+..+.. .+|++|+|++|++++.++..|.++++|+.|+|++|++++..|
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88888888887 8999999999877766655 489999999999998888889999999999999999997554
No 309
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.93 E-value=6e-27 Score=259.83 Aligned_cols=186 Identities=26% Similarity=0.360 Sum_probs=153.3
Q ss_pred HhcCCCccceeeeeceEEEEEEEe--CCCeEEEEEEeeccc--chhhhhHHHHHHHhhhc---CCccceeEEeeec----
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI--GEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSI---RHRNLIKVISSCS---- 846 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~---- 846 (982)
..++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 467899999999999999999997 458999999987542 22345677888888776 8999999999986
Q ss_pred -CCCeeEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEee
Q 036229 847 -TEEFKALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDF 924 (982)
Q Consensus 847 -~~~~~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DF 924 (982)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5668899999997 59999987643 34899999999999999999999 999999999999999999999999999
Q ss_pred cCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 925 GIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 925 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|+++.... ........||+.|+|||++.+..++.. +|+|++|+
T Consensus 165 g~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~ 207 (326)
T 1blx_A 165 GLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATP---VDLWSVGC 207 (326)
T ss_dssp CSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTH---HHHHHHHH
T ss_pred cccccccC---CCCccccccccceeCHHHHhcCCCCcc---hhHHHHHH
Confidence 99986532 122345678999999999977655543 55666663
No 310
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=9.4e-29 Score=298.32 Aligned_cols=421 Identities=15% Similarity=0.131 Sum_probs=211.6
Q ss_pred CEEEcCCCCccccCcc-hhhhccCCcEEEccCCcccCc---cC------------ccccCcCCCCccccccCcccccCch
Q 036229 108 QSLNLGFNRLSGSIPS-AIFTLYTLKYVNFRGNQLSGA---FP------------SFIFNKSSLQHLDFSYNALSGEIPA 171 (982)
Q Consensus 108 ~~L~L~~n~~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~---~p------------~~~~~l~~L~~L~Ls~N~l~~~ip~ 171 (982)
+.+++++... ..|. .+..+++|++|+|+++..... .| .....+++|++|+|++|.+++..+.
T Consensus 46 ~~l~~~~~~~--~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~ 123 (594)
T 2p1m_B 46 RKVFIGNCYA--VSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLE 123 (594)
T ss_dssp CEEEESSTTS--SCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred eEEeeccccc--cCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHH
Confidence 3566655432 2333 456789999999999863211 12 1134577888888888888766666
Q ss_pred hhhcCCCCCCeeeecce-eeecc-cCCCccCcCcccEEEeeccccccccccccc----cccchhhhhccCCC--CCCc-h
Q 036229 172 NICSNLPFLESISLSQN-MFHGR-IPSALSNCKYLEILSLSINNLLGAIPKEIG----NLTKLKELYLGYSG--LQGE-I 242 (982)
Q Consensus 172 ~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~L~~N~--l~~~-~ 242 (982)
.+...+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+.++. .+++|++|++++|. ++.. +
T Consensus 124 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l 203 (594)
T 2p1m_B 124 LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSAL 203 (594)
T ss_dssp HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHH
T ss_pred HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHH
Confidence 66446788888888888 45433 333445778888888888887765544443 45577777777775 2211 1
Q ss_pred hhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCC-------ccccCCCccccccCCCcEE-EccCccccccC
Q 036229 243 PREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKN-------FLTGEIPPEIHNLHNLKLL-DLSHNKLVGAV 314 (982)
Q Consensus 243 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N-------~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~ 314 (982)
+..+.++++|+.|++++|...+.+|..+..+++|++|+++.+ .+++ ++..+.++++|+.| ++.+... +.+
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l 281 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYL 281 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGG
T ss_pred HHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCCcccch-hhH
Confidence 222234567777777766222235566666777777764433 3332 22355566666666 3333222 233
Q ss_pred cccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCccccc-ccccccCCCCCCEEEecc---------ccCc
Q 036229 315 PATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGT-IPRFIFNASKLSVLELGR---------NSFS 384 (982)
Q Consensus 315 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~---------N~i~ 384 (982)
+..+..+++|+.|+|++|.+.+.........+++|++|++++| +... ++.....+++|++|++++ +.++
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~ 360 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALT 360 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCC
T ss_pred HHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCC
Confidence 4333445566666666665432211111224455555655555 2211 122222345555555522 2232
Q ss_pred cccCCccc-cCCccceecccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccc
Q 036229 385 GFIPNTFG-NLRNLRLMTLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVS 463 (982)
Q Consensus 385 ~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~ 463 (982)
+.....+. .+++|+.|.++.|.++...... ....+++|+.|+++.|...+ .++++
T Consensus 361 ~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~----l~~~~~~L~~L~L~~~~~~~--------------------~~~l~ 416 (594)
T 2p1m_B 361 EQGLVSVSMGCPKLESVLYFCRQMTNAALIT----IARNRPNMTRFRLCIIEPKA--------------------PDYLT 416 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEEESCCCHHHHHH----HHHHCTTCCEEEEEESSTTC--------------------CCTTT
T ss_pred HHHHHHHHHhchhHHHHHHhcCCcCHHHHHH----HHhhCCCcceeEeecccCCC--------------------ccccc
Confidence 22111111 2344444444444333211110 00123334444443110000 02222
Q ss_pred cC-----CCcccccccccceEEecCCCCCCCCCccccC-cCCCCeEEeeccCCCCCCCccc-CCCccccEEEccCCcCCc
Q 036229 464 GG-----FPKEIGNLTNLIGIYLGGNKLNGSIPITLGK-LQKLQGLHLEDNKLEGPIPDDI-CRLTKLYELGLSGNKLSG 536 (982)
Q Consensus 464 ~~-----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 536 (982)
+. ++..+..+++|+.|++++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 11 111244555666666655 444433334433 5566666666666654333333 345566666666666543
Q ss_pred CCCc-cccCCCcccccccCCCcc
Q 036229 537 SIPA-CFSNLASLGTLSLGSNKL 558 (982)
Q Consensus 537 ~~p~-~~~~l~~L~~L~L~~N~l 558 (982)
.... ....+++|++|++++|++
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHHhCCCCCEEeeeCCCC
Confidence 3222 223355566666666655
No 311
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.93 E-value=4.7e-27 Score=255.56 Aligned_cols=186 Identities=22% Similarity=0.356 Sum_probs=155.7
Q ss_pred HHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEE
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~l 853 (982)
...++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999975 68999999997542 2345778999999999999999999999999999999
Q ss_pred EEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC---CcEEEEeecCceee
Q 036229 854 ILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN---MVAHLSDFGIAKLL 930 (982)
Q Consensus 854 v~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~ 930 (982)
||||+++++|.+++.... .+++.++..++.|++.||+||| ++||+||||||+||+++.+ +.+||+|||++...
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999999887544 4899999999999999999999 9999999999999999754 47999999999865
Q ss_pred cCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
.... ......||+.|+|||++.+. ++ ..+|+|++|+
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~---~~~Di~slG~ 210 (287)
T 2wei_A 175 QQNT---KMKDRIGTAYYIAPEVLRGT-YD---EKCDVWSAGV 210 (287)
T ss_dssp CCCS---SCSCHHHHHTTCCHHHHTTC-CC---THHHHHHHHH
T ss_pred cCCC---ccccccCcccccChHHhcCC-CC---CchhhHhHHH
Confidence 3222 22345689999999998764 33 3456666664
No 312
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.93 E-value=2.3e-27 Score=262.28 Aligned_cols=186 Identities=22% Similarity=0.255 Sum_probs=154.1
Q ss_pred HHhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccc------hhhhhHHHHHHHhhhcC--CccceeEEeeecC
Q 036229 777 RATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCG------RAFKSFDVECEMMKSIR--HRNLIKVISSCST 847 (982)
Q Consensus 777 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~ 847 (982)
...++|++.+.||+|+||.||+|+. .+++.||||+++.... ...+.+.+|++++++++ ||||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 3467899999999999999999985 4689999999975422 12356778999999996 5999999999999
Q ss_pred CCeeEEEEEeccC-CChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc-CCCcEEEEeec
Q 036229 848 EEFKALILEYMPH-GSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD-DNMVAHLSDFG 925 (982)
Q Consensus 848 ~~~~~lv~E~~~~-gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~-~~~~~kL~DFG 925 (982)
++..++||||+.+ ++|.+++.... .+++..+..++.|++.||+||| ++||+||||||+||+++ +++.+||+|||
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 9999999999976 89999987643 5889999999999999999999 99999999999999999 78999999999
Q ss_pred CceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 926 IAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 926 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
+++..... ......||+.|+|||++.+..+... .+|+|++|
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~--~~Di~slG 236 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGR--SAAVWSLG 236 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHH--HHHHHHHH
T ss_pred cccccccc----cccCCCCCccCCChHHhccCCCCCc--cchHHhHH
Confidence 99876322 2234579999999999866544222 23455555
No 313
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=4.6e-25 Score=237.35 Aligned_cols=206 Identities=29% Similarity=0.319 Sum_probs=168.2
Q ss_pred ccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccC
Q 036229 475 NLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLG 554 (982)
Q Consensus 475 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 554 (982)
+.+.+++++|+++. +|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|+++.+..|.++++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 45677777777773 454443 567788888888877666677778888888888888876666667778888888888
Q ss_pred CCccccccccc-ccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCc
Q 036229 555 SNKLTSIPLTI-WNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSI 633 (982)
Q Consensus 555 ~N~l~~ip~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 633 (982)
+|+++.+|... ..+++|++|++++|++++..+..++.+++|+.|++++|++++..+..|+.+++|++|+|++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 88888777654 46778888888888888877778888999999999999998887778999999999999999999888
Q ss_pred cccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCC
Q 036229 634 SESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 634 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 683 (982)
+..|.++++|+.|+|++|++++..+..+..+++|+.|+|++|++.+.++.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 88899999999999999999987777788999999999999999887753
No 314
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.3e-25 Score=243.85 Aligned_cols=207 Identities=24% Similarity=0.238 Sum_probs=184.3
Q ss_pred ccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcc
Q 036229 469 EIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASL 548 (982)
Q Consensus 469 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (982)
.+.++++++.+++++|+++. +|..+. ++++.|+|++|+|++..|..|..+++|+.|+|++|+|++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 35677889999999999984 454443 6899999999999988888899999999999999999865443 788999
Q ss_pred cccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc
Q 036229 549 GTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR 628 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 628 (982)
++|+|++|+++.+|..+..+++|++|++++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 99999999999999988889999999999999998888899999999999999999999888889999999999999999
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccC
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEI 681 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 681 (982)
|++..+..|.++++|+.|+|++|+|+ .+|..+...++|+.++|++|++.+.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 99877788899999999999999998 67888888889999999999998765
No 315
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.93 E-value=1.4e-26 Score=256.82 Aligned_cols=185 Identities=25% Similarity=0.293 Sum_probs=133.1
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc-chhhhhHHHHHH-HhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC-GRAFKSFDVECE-MMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|+..+.||+|+||.||+|+.. +++.||||+++... .....++..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 478999999999999999999974 69999999997543 233445566666 677889999999999999999999999
Q ss_pred EeccCCChHHHHhc----CCCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 856 EYMPHGSLEKSLYS----SNYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 856 E~~~~gsL~~~l~~----~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
||+++ +|.+++.. ....+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88777753 2456899999999999999999999 88 9999999999999999999999999999876
Q ss_pred cCCCCceeecccccccccccCceee----eeeeeeEEeeEeeeeeee
Q 036229 931 IGEDQSITQTQTLATIGYMAPGLFH----VKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 931 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~~~~d~~~~~~ 973 (982)
... .......||+.|+|||++. +..++ ..+|+|++|+
T Consensus 177 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~---~~~Di~slG~ 217 (327)
T 3aln_A 177 VDS---IAKTRDAGCRPYMAPERIDPSASRQGYD---VRSDVWSLGI 217 (327)
T ss_dssp --------------------------------CC---SHHHHHHHHH
T ss_pred ccc---cccccCCCCccccCceeeccccCcCCCC---chhhHHHHHH
Confidence 322 1223447999999999984 33333 3355666663
No 316
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.93 E-value=8.8e-27 Score=262.32 Aligned_cols=192 Identities=23% Similarity=0.292 Sum_probs=142.0
Q ss_pred HHHHHHhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccceeEEeeecCCC--
Q 036229 773 LELCRATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEE-- 849 (982)
Q Consensus 773 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-- 849 (982)
.+.....++|++.+.||+|+||.||+|+.. +++.||||++... .....+..+|++.++.++||||+++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455677889999999999999999999964 5899999998644 233456677888889999999999999985433
Q ss_pred -----eeEEEEEeccCCChHHHHh---cCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC-CCcEE
Q 036229 850 -----FKALILEYMPHGSLEKSLY---SSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD-NMVAH 920 (982)
Q Consensus 850 -----~~~lv~E~~~~gsL~~~l~---~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~-~~~~k 920 (982)
..++||||+++ ++.+.+. .....+++..+..++.|++.|+.||| .+++||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 37899999976 5554443 24456889999999999999999999 55789999999999999996 89999
Q ss_pred EEeecCceeecCCCCceeecccccccccccCceeeeee-eeeEEeeEeeeeeee
Q 036229 921 LSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKY-ILFVVNFLTSYSFLM 973 (982)
Q Consensus 921 L~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~d~~~~~~ 973 (982)
|+|||+|+...... ......||+.|+|||++.+.. ++. .+|+|++|+
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~---~~Di~slG~ 220 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTT---AVDIWSVGC 220 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCT---HHHHHHHHH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCc---HHHHHHHHH
Confidence 99999998764322 233567899999999985543 343 345566663
No 317
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.93 E-value=2e-26 Score=256.37 Aligned_cols=181 Identities=22% Similarity=0.290 Sum_probs=129.0
Q ss_pred HhcCCCccc-eeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHH-HHhhhcCCccceeEEeeecC----CCe
Q 036229 778 ATNRFSENN-LIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVEC-EMMKSIRHRNLIKVISSCST----EEF 850 (982)
Q Consensus 778 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~----~~~ 850 (982)
..++|.+.+ .||+|+||.||+|+.. +++.||||++.... ...+|+ ..++.++||||+++++++.. +..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 457898854 6999999999999865 58999999986431 122233 33566799999999999865 456
Q ss_pred eEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecC
Q 036229 851 KALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGI 926 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~DFGl 926 (982)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 899999999999999998653 36899999999999999999999 999999999999999975 45699999999
Q ss_pred ceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 927 AKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 927 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
++..... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 178 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 217 (336)
T 3fhr_A 178 AKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKS---CDMWSLGV 217 (336)
T ss_dssp CEEC--------------------------CHHHHH---HHHHHHHH
T ss_pred ceecccc----ccccCCCCcCccChhhhCCCCCCch---hhHHHHHH
Confidence 9865322 2234578999999999977666543 45566663
No 318
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.93 E-value=8.2e-27 Score=261.72 Aligned_cols=180 Identities=23% Similarity=0.300 Sum_probs=146.4
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeeecCCCe-----
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF----- 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 850 (982)
.++|...+.||+|+||.||+|+.. +|+.||||++... .....+++.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467999999999999999999864 5999999999653 22345678899999999999999999999987654
Q ss_pred -eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 851 -KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 851 -~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
.++||||++ ++|.+++.. .+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887743 4899999999999999999999 99999999999999999999999999999986
Q ss_pred ecCCCCceeecccccccccccCceeee-eeeeeEEeeEeeeeeee
Q 036229 930 LIGEDQSITQTQTLATIGYMAPGLFHV-KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 930 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~~~~d~~~~~~ 973 (982)
... ......||+.|+|||++.+ ..++. .+|+|++|+
T Consensus 176 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~---~~Di~slG~ 212 (353)
T 3coi_A 176 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQ---TVDIWSVGC 212 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCT---THHHHHHHH
T ss_pred CCC-----CccccccCcCcCCHHHHhCcCCCCc---hhhHHHHHH
Confidence 422 1234678999999999866 33333 345566653
No 319
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.93 E-value=6.9e-27 Score=276.17 Aligned_cols=187 Identities=27% Similarity=0.400 Sum_probs=153.0
Q ss_pred HhcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecc-cchhhhhHHHHHHHhhhcCCccceeEEeeecC------CC
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQ-CGRAFKSFDVECEMMKSIRHRNLIKVISSCST------EE 849 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~ 849 (982)
..++|++.+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999999986 45899999998754 33446778999999999999999999998765 66
Q ss_pred eeEEEEEeccCCChHHHHhcCCC--cCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCc---EEEEee
Q 036229 850 FKALILEYMPHGSLEKSLYSSNY--ILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMV---AHLSDF 924 (982)
Q Consensus 850 ~~~lv~E~~~~gsL~~~l~~~~~--~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~---~kL~DF 924 (982)
..++||||+++|+|.+++..... .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 78999999999999999986432 5788899999999999999999 999999999999999997664 999999
Q ss_pred cCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 925 GIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 925 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
|.+....... ......||+.|+|||++.+..++.. +|+|++|+
T Consensus 169 G~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~k---sDIwSLGv 211 (676)
T 3qa8_A 169 GYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVT---VDYWSFGT 211 (676)
T ss_dssp CCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTT---HHHHHHHH
T ss_pred cccccccccc---ccccccCCcccCChHHhccCCCCch---hHHHHHHH
Confidence 9998763322 2345679999999999987766544 45566653
No 320
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.93 E-value=1.4e-26 Score=266.78 Aligned_cols=188 Identities=25% Similarity=0.330 Sum_probs=139.0
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCccceeEEeeecCCCeeEEEEEec
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRNLIKVISSCSTEEFKALILEYM 858 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~lv~E~~ 858 (982)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 345567889999999998776668999999998743 235678899999886 8999999999999999999999999
Q ss_pred cCCChHHHHhcCCCcC------CHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCC-------------CcE
Q 036229 859 PHGSLEKSLYSSNYIL------DIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDN-------------MVA 919 (982)
Q Consensus 859 ~~gsL~~~l~~~~~~~------~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~ 919 (982)
+ |+|.+++....... ++..+..++.||+.||+||| ++||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 69999997643211 22345679999999999999 9999999999999999754 489
Q ss_pred EEEeecCceeecCCCCce--eecccccccccccCceeeeee----eeeEEeeEeeeeeeee
Q 036229 920 HLSDFGIAKLLIGEDQSI--TQTQTLATIGYMAPGLFHVKY----ILFVVNFLTSYSFLMI 974 (982)
Q Consensus 920 kL~DFGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~~~~d~~~~~~~ 974 (982)
||+|||+|+......... ......||+.|+|||++.+.. ....+..+|+|++|++
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~i 228 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHH
Confidence 999999999864432211 223467999999999996511 1112234556666643
No 321
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.93 E-value=1.1e-27 Score=264.76 Aligned_cols=178 Identities=24% Similarity=0.392 Sum_probs=146.4
Q ss_pred HHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--chhhhhHHHHHHHhhhcCCccceeEEeeecCCCe
Q 036229 773 LELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEF 850 (982)
Q Consensus 773 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 850 (982)
.++....++|++.+.||+|+||.||+|+... .||+|+++... ....+.+.+|++++++++||||+++++++..++.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3344456889999999999999999998754 49999986442 3344677889999999999999999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 851 KALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
.++||||+++++|.+++...+..+++..+..++.|++.||+||| ++||+||||||+||+++ ++.+||+|||++...
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 99999999999999999877667899999999999999999999 99999999999999998 679999999998764
Q ss_pred cCCC---CceeecccccccccccCceeee
Q 036229 931 IGED---QSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 931 ~~~~---~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
.... .........||+.|+|||++.+
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 208 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208 (319)
T ss_dssp --------CCSCBCCSGGGGTSCHHHHSC
T ss_pred ccccccccccccccCCCcccccChHHhhh
Confidence 3211 1122234568999999999864
No 322
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.92 E-value=4.4e-26 Score=258.50 Aligned_cols=184 Identities=23% Similarity=0.314 Sum_probs=151.7
Q ss_pred HhcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcC-Cc-----cceeEEeeecCCCe
Q 036229 778 ATNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HR-----NLIKVISSCSTEEF 850 (982)
Q Consensus 778 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~ 850 (982)
..++|++.+.||+|+||.||+|+.. +++.||||+++.. .....++..|+++++.++ |+ +|+++++++...+.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 4678999999999999999999864 5899999999743 334567788999988874 44 59999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc--CCCcEEEEeecCc
Q 036229 851 KALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD--DNMVAHLSDFGIA 927 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~--~~~~~kL~DFGla 927 (982)
.++||||++ ++|.+++.... ..+++..+..++.|++.||.||| .++.|||||||||+||+++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT-STTTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc-cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 59999988654 45899999999999999999999 2247999999999999995 5778999999999
Q ss_pred eeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeee
Q 036229 928 KLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFL 972 (982)
Q Consensus 928 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~ 972 (982)
+.... ......||+.|+|||++.+..++.. +|+|++|
T Consensus 209 ~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG 245 (382)
T 2vx3_A 209 CQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLA---IDMWSLG 245 (382)
T ss_dssp EETTC-----CCCSSCSCGGGCCHHHHTTCCCCTH---HHHHHHH
T ss_pred eeccc-----ccccccCCccccChHHHcCCCCCcH---HHHHHHH
Confidence 87532 1235679999999999987766543 4556665
No 323
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.92 E-value=2.2e-26 Score=260.47 Aligned_cols=182 Identities=18% Similarity=0.262 Sum_probs=150.5
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHhhhcC-----------CccceeEEeeec
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-----------HRNLIKVISSCS 846 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~l~~~~~ 846 (982)
.++|++.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46899999999999999999986 46999999999743 334567888999998886 899999999987
Q ss_pred CCC----eeEEEEEeccCCChHHHHhcC-CCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEc------
Q 036229 847 TEE----FKALILEYMPHGSLEKSLYSS-NYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLD------ 914 (982)
Q Consensus 847 ~~~----~~~lv~E~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~------ 914 (982)
..+ ..++||||+ +++|.+++... ...+++..+..++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 88999999764 345899999999999999999999 88 999999999999994
Q ss_pred CCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 915 DNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 915 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
..+.+||+|||+|+..... .....||+.|+|||++.+..++.. +|+|++|+
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~ 223 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCG---ADIWSTAC 223 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTH---HHHHHHHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCch---HhHHHHHH
Confidence 4458999999999875321 234578999999999987765543 45566663
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=4.7e-25 Score=237.42 Aligned_cols=206 Identities=26% Similarity=0.278 Sum_probs=176.4
Q ss_pred ccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcc
Q 036229 469 EIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASL 548 (982)
Q Consensus 469 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (982)
....+++|+.|++++|.++.. ..+..+++|++|+|++|++++. ..+..+++|++|+|++|++++..+..|.++++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 355677888888888888742 3477888888888888888863 478888888888888888888777778888888
Q ss_pred cccccCCCcccccccc-cccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccc
Q 036229 549 GTLSLGSNKLTSIPLT-IWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYN 627 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N 627 (982)
++|+|++|+++.+|.. +..+++|++|++++|++++..+..++.+++|+.|++++|++++..+..|+.+++|++|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 8888888888887765 457888999999999988887878899999999999999999988888999999999999999
Q ss_pred cccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCCC
Q 036229 628 RLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGG 685 (982)
Q Consensus 628 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~ 685 (982)
++++.+|..|..+++|+.|+|++|.+.+.. +.|+.++++.|.++|.+|...
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~-------~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCTC-------PGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCT-------TTTHHHHHHHHHTGGGBBCTT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccccC-------cHHHHHHHHHHhCCCcccCcc
Confidence 999988888999999999999999998654 468899999999999999763
No 325
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.92 E-value=6.8e-26 Score=254.45 Aligned_cols=182 Identities=20% Similarity=0.267 Sum_probs=150.8
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-C-CeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc------ceeEEeeecCCCe
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-E-GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN------LIKVISSCSTEEF 850 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 850 (982)
.++|++.+.||+|+||.||+|+.. + ++.||+|+++.. ....+.+.+|+++++.++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 478999999999999999999864 3 478999999743 344567888999999997766 9999999999999
Q ss_pred eEEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEE----------------
Q 036229 851 KALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLL---------------- 913 (982)
Q Consensus 851 ~~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl---------------- 913 (982)
.++||||+ ++++.+++.... ..+++.++..++.|++.||+||| ++||+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 567777766543 46899999999999999999999 9999999999999999
Q ss_pred ---cCCCcEEEEeecCceeecCCCCceeecccccccccccCceeeeeeeeeEEeeEeeeeeee
Q 036229 914 ---DDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHVKYILFVVNFLTSYSFLM 973 (982)
Q Consensus 914 ---~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~d~~~~~~ 973 (982)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.. +|+|++|+
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~ 227 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQP---CDVWSIGC 227 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTH---HHHHHHHH
T ss_pred ccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCc---cchHHHHH
Confidence 56789999999999864221 234679999999999977665543 55666664
No 326
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.92 E-value=3.7e-26 Score=252.49 Aligned_cols=185 Identities=24% Similarity=0.269 Sum_probs=134.7
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeecccch--hhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCGR--AFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.++|+..+.||+|+||.||+|+.. +++.||||++...... ..+.+..+..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467899999999999999999975 6899999999754322 2233444555678889999999999999999999999
Q ss_pred EeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCC-CeEEcCCCCCCEEEcCCCcEEEEeecCceeecCCC
Q 036229 856 EYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSA-PVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGED 934 (982)
Q Consensus 856 E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 934 (982)
||+ ++.+..+.......+++..+..++.|++.||.||| ++ ||+||||||+||+++.++.+||+|||++.......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666554567899999999999999999999 85 99999999999999999999999999998653322
Q ss_pred CceeecccccccccccCceeee-----eeeeeEEeeEeeeeeee
Q 036229 935 QSITQTQTLATIGYMAPGLFHV-----KYILFVVNFLTSYSFLM 973 (982)
Q Consensus 935 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~~~~d~~~~~~ 973 (982)
......||+.|+|||++.. ..++ ..+|+|++|+
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~---~~~Di~slG~ 217 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYD---IRADVWSLGI 217 (318)
T ss_dssp ----------CCTTCCHHHHC--------CC---THHHHHHHHH
T ss_pred ---cccccCCCccccChhhcccccccccCCc---cccchhhHHH
Confidence 2234579999999999853 2233 3355666663
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.2e-24 Score=231.81 Aligned_cols=206 Identities=28% Similarity=0.287 Sum_probs=183.7
Q ss_pred cccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCce
Q 036229 493 TLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGML 572 (982)
Q Consensus 493 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~ 572 (982)
.++++++++++++++|.++ .+|..+. ++++.|+|++|+|++..|..|.++++|++|+|++|+++.+|.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 4678899999999999999 5666553 6899999999999998899999999999999999999998875 7789999
Q ss_pred EEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCc
Q 036229 573 YLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNN 652 (982)
Q Consensus 573 ~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 652 (982)
+|++++|+++ .+|..+..+++|+.|++++|+|++..|..|..+++|++|+|++|+|++.++..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 678889999999999999999999888999999999999999999998888899999999999999999
Q ss_pred CCCCCCcccccccccceeecCCCcccccCCCCC-CCCCCCCcccccCcccCCC
Q 036229 653 LSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGG-SFGNFSAKSFEGNELLCGS 704 (982)
Q Consensus 653 l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~-~~~~~~~~~~~gn~~lc~~ 704 (982)
|++..+..|..+++|++|+|++|+++ .+|.+. ...........|||+.|..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 99776677889999999999999999 666553 2334455667899999974
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.2e-24 Score=234.15 Aligned_cols=212 Identities=23% Similarity=0.259 Sum_probs=159.6
Q ss_pred cccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCC
Q 036229 100 QLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPF 179 (982)
Q Consensus 100 ~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~ 179 (982)
.+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++. +.+..+++|++|+|++|.++ .+|+..|..+++
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~ 110 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTN 110 (272)
T ss_dssp CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCC-CCCTTTTTTCTT
T ss_pred ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccC-ccChhHhcCCcC
Confidence 3556777888888887775 333 477788888888888887752 46777888888888888877 456555577888
Q ss_pred CCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccc
Q 036229 180 LESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQV 259 (982)
Q Consensus 180 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 259 (982)
|++|+|++|++++..+..|+++++|++|+|++|++++..+..++.+++|++|++++|++++..+..|+.+++|+.|++++
T Consensus 111 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (272)
T 3rfs_A 111 LKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQ 190 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCC
Confidence 88888888888877777778888888888888888766666677788888888888888877777777788888888888
Q ss_pred cccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCC
Q 036229 260 SNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMST 323 (982)
Q Consensus 260 n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 323 (982)
|++++..|..+..+++|++|++++|.+++. +++|+.|+++.|+++|.+|..++.+..
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 191 NQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 888877777777888888888888877643 446777888888888888877665543
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.3e-24 Score=229.20 Aligned_cols=191 Identities=22% Similarity=0.274 Sum_probs=135.2
Q ss_pred CCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccC
Q 036229 67 PVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFP 146 (982)
Q Consensus 67 ~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 146 (982)
+||.|.|++|.. ..+.+++++++++ .+|..+. ++++.|+|++|++++..|.++..+++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 588999999962 2346788888888 6776665 578888888888887777778888888888888888887777
Q ss_pred ccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeecccccccccccccccc
Q 036229 147 SFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLT 226 (982)
Q Consensus 147 ~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 226 (982)
..+.++++|++|+|++|.++ .+|...|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hHhccCCcCCEEECCCCccc-ccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 77778888888888888877 56666667777777777777777766666667777777777777777655555566666
Q ss_pred chhhhhccCCCCCCchhhhcCCCcccceEeccccccCC
Q 036229 227 KLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQG 264 (982)
Q Consensus 227 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 264 (982)
+|++|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 66666666666665544455555555555555554443
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=238.53 Aligned_cols=229 Identities=16% Similarity=0.161 Sum_probs=134.0
Q ss_pred cccEEEccCCCCCCCCC-ccccccccccccEEeccCCccccCCCccc--ccccccceEEecCCCCCCCCC----ccccCc
Q 036229 425 SLTYIGLSNNPLDGILP-RMSMGNLSHSLEYFDMSYCNVSGGFPKEI--GNLTNLIGIYLGGNKLNGSIP----ITLGKL 497 (982)
Q Consensus 425 ~L~~L~Ls~N~l~~~~~-~~~~~~~~~~L~~Ldls~n~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l 497 (982)
.++.+.+.++.+....- ..........|++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 45677777765532100 00000011236666666666666666665 666666666666666665443 333456
Q ss_pred CCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcC--C--CccccCCCcccccccCCCcccccccccccccCceE
Q 036229 498 QKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGS--I--PACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLY 573 (982)
Q Consensus 498 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~ 573 (982)
++|++|+|++|++++..|..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++.+|.....
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~------ 218 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAA------ 218 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHH------
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHH------
Confidence 6666666666666666666666666666666666665431 1 22235566666666666666554432100
Q ss_pred EecCCCcccCCCccccccccccceeecccccccccccccccCc---cCcceEecccccccCCccccccCCCCCCeeeCCC
Q 036229 574 LNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGL---TNLQYLFLGYNRLQGSISESFGDLISLKSLNLSN 650 (982)
Q Consensus 574 L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 650 (982)
.++.+++|+.|||++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|||++
T Consensus 219 --------------l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~ 281 (310)
T 4glp_A 219 --------------LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSS 281 (310)
T ss_dssp --------------HHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCS
T ss_pred --------------HHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCC
Confidence 12344555666666666666555555554 57777777777777 4555553 6777788888
Q ss_pred CcCCCCCCcccccccccceeecCCCccc
Q 036229 651 NNLSRSIPISLEKLSYLEDLDLSFNKLK 678 (982)
Q Consensus 651 N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 678 (982)
|+|++. |. +..+++|++|+|++|+++
T Consensus 282 N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 282 NRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 877753 33 566777788888888776
No 331
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=6.5e-26 Score=252.61 Aligned_cols=269 Identities=18% Similarity=0.223 Sum_probs=146.0
Q ss_pred CCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCC--CCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccC
Q 036229 66 TPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNL--SSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSG 143 (982)
Q Consensus 66 ~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l--~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 143 (982)
.-|.+|.++.|+ ...++.++++++.+. +..+..+ ++++.|++++|.+.+..|. ++.+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~--~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASD--ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTC--STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcC--chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 346689999886 334556666666554 3344444 5666666666666544443 4455666666666666554
Q ss_pred c-cCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecce-eeecc-cCCCccCcCcccEEEeecc-ccccccc
Q 036229 144 A-FPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQN-MFHGR-IPSALSNCKYLEILSLSIN-NLLGAIP 219 (982)
Q Consensus 144 ~-~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N-~l~~~~p 219 (982)
. +|..+..+++|++|+|++|.+++..|..+ ..+++|++|+|++| .+++. ++..+.++++|++|++++| ++++.
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l-~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~-- 184 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTL-AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK-- 184 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHH-TTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH--
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHH-hcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH--
Confidence 3 55555555555555555555554444443 44555555555555 34431 3333444455555555555 44432
Q ss_pred cccccccchhhhhccCCCCCCchhhhcCCCc-ccceEecccc--ccC-CcCChhhhccCCCcEEEccCCc-cccCCCccc
Q 036229 220 KEIGNLTKLKELYLGYSGLQGEIPREFGNLA-ELELMALQVS--NLQ-GEIPQELANLTGLEVLKLGKNF-LTGEIPPEI 294 (982)
Q Consensus 220 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~n--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~ 294 (982)
.++..+..++ +|+.|++++| .++ +.+|..+.++++|++|++++|. +++..+..+
T Consensus 185 ---------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 185 ---------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp ---------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred ---------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 1344444444 5555555555 233 2344455566666666666666 555555566
Q ss_pred cccCCCcEEEccCcc-ccccCcccccCCCCCceeecCCCcCCCCcCccccccC-CCccEEEccCCcccccccccccC
Q 036229 295 HNLHNLKLLDLSHNK-LVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQL-PNLEELRLWSNNFSGTIPRFIFN 369 (982)
Q Consensus 295 ~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~ 369 (982)
..+++|++|++++|. +.......+..+++|+.|++++| +.. .....+ .++..|++++|++++..|..+..
T Consensus 244 ~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~----~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 244 FQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD----GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT----TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred hCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH----HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 666666666666663 22111124555666666666666 321 111112 23566678888888888776653
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=2.6e-24 Score=227.01 Aligned_cols=196 Identities=17% Similarity=0.212 Sum_probs=134.2
Q ss_pred ccceEEecCCCCCCCCCccccCcCCCCeEEeeccC-CCCCCCcccCCCccccEEEccC-CcCCcCCCccccCCCcccccc
Q 036229 475 NLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNK-LEGPIPDDICRLTKLYELGLSG-NKLSGSIPACFSNLASLGTLS 552 (982)
Q Consensus 475 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 552 (982)
+|+.|++++|+++++.+..|.++++|++|++++|+ +++..+..|.++++|++|++++ |+|+++.+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665555566666666666666665 6655555666666666666666 666655556666666666666
Q ss_pred cCCCcccccccccccccCce---EEecCCC-cccCCCccccccccccc-eeecccccccccccccccCccCcceEecccc
Q 036229 553 LGSNKLTSIPLTIWNLKGML---YLNFSSN-FFTGPLPLDIGNLKVLI-GIDFSTNNFSDVIPTVIGGLTNLQYLFLGYN 627 (982)
Q Consensus 553 L~~N~l~~ip~~~~~l~~L~---~L~Ls~N-~l~~~~~~~~~~l~~L~-~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N 627 (982)
+++|+++.+|. +..+++|+ +|++++| ++++..+..|.++++|+ .|++++|+++.+.+..|.. ++|++|+|++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 66666666665 44555555 7777777 66666666677778888 8888888887554445555 78888888888
Q ss_pred c-ccCCccccccCC-CCCCeeeCCCCcCCCCCCcccccccccceeecCCC
Q 036229 628 R-LQGSISESFGDL-ISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFN 675 (982)
Q Consensus 628 ~-l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N 675 (982)
+ +++..+..|.++ ++|+.|+|++|++++ +|.. .+++|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 4 887667788888 888888888888875 4443 5667888888766
No 333
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.90 E-value=1.4e-24 Score=235.42 Aligned_cols=141 Identities=17% Similarity=0.094 Sum_probs=125.5
Q ss_pred hcCCCccceeeeeceEEEEEEEeC-CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeEEE
Q 036229 779 TNRFSENNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~lv 854 (982)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 368999999999999999999975 48999999997542 23347789999999999999999999999999999999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 925 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFG 925 (982)
|||++|++|.+++... ....++.+++.|++.||+||| ++||+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc
Confidence 9999999999999543 355678899999999999999 9999999999999999999999998554
No 334
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.8e-25 Score=248.74 Aligned_cols=110 Identities=16% Similarity=0.157 Sum_probs=61.8
Q ss_pred EEEcCCCCccccCcchhhhccCCcEEEccCCcccCccC----ccccCcC-CCCccccccCcccccCchhhhcCC-----C
Q 036229 109 SLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFP----SFIFNKS-SLQHLDFSYNALSGEIPANICSNL-----P 178 (982)
Q Consensus 109 ~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~ip~~~~~~l-----~ 178 (982)
.++++.|.++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|.+++..+..+ ..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l-~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDEL-VQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHH-HHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHH-HHHHhccCC
Confidence 35666677776666666656667777777777665444 4555565 66666666666664434333 222 5
Q ss_pred CCCeeeecceeeecccCCCccC----c-CcccEEEeeccccccccc
Q 036229 179 FLESISLSQNMFHGRIPSALSN----C-KYLEILSLSINNLLGAIP 219 (982)
Q Consensus 179 ~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~~p 219 (982)
+|++|+|++|++++..+..+.. + ++|++|+|++|++++..+
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 126 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSS 126 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHH
Confidence 5555555555555444433222 2 455555555555554433
No 335
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.90 E-value=8.8e-25 Score=249.99 Aligned_cols=182 Identities=18% Similarity=0.200 Sum_probs=134.4
Q ss_pred hcCCCccceeeeeceEEEEEEEe-CCCeEEEEEEeeccc---chhhhhHHHHHHHhhhcCC-ccce--------------
Q 036229 779 TNRFSENNLIGRGGFGSVYKARI-GEGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIRH-RNLI-------------- 839 (982)
Q Consensus 779 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv-------------- 839 (982)
...|...+.||+|+||.||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| ++..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577889999999999999995 469999999987432 2336788999999999977 2111
Q ss_pred -------eEEeeecC-----CCeeEEEEEeccCCChHHHHh------cCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCe
Q 036229 840 -------KVISSCST-----EEFKALILEYMPHGSLEKSLY------SSNYILDIFQRLNIMVDVATTLEYLHFGYSAPV 901 (982)
Q Consensus 840 -------~l~~~~~~-----~~~~~lv~E~~~~gsL~~~l~------~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~i 901 (982)
.++.++.. ....+++|+++ +++|.+++. .....+++..+..++.|++.||+||| ++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 11111111 12356777766 679999884 22445778889999999999999999 9999
Q ss_pred EEcCCCCCCEEEcCCCcEEEEeecCceeecCCCCceeecccccccccccCcee----------eeeeeeeEEeeEeeeee
Q 036229 902 IHCDLKPSNVLLDDNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLF----------HVKYILFVVNFLTSYSF 971 (982)
Q Consensus 902 vHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~~~~d~~~~ 971 (982)
|||||||+|||++.++.+||+|||+|+.... .....+| +.|+|||++ .+..++ ..+|+|++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~---~~~DvwSl 303 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMT---FAFDTWTL 303 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEEC---HHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCC---chhhHHHH
Confidence 9999999999999999999999999986421 1345567 999999999 333333 34566666
Q ss_pred ee
Q 036229 972 LM 973 (982)
Q Consensus 972 ~~ 973 (982)
|+
T Consensus 304 Gv 305 (413)
T 3dzo_A 304 GL 305 (413)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=229.61 Aligned_cols=207 Identities=15% Similarity=0.142 Sum_probs=154.5
Q ss_pred CCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCC----cccccccccceEEecCCCCCCCCCccccCc
Q 036229 422 NCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFP----KEIGNLTNLIGIYLGGNKLNGSIPITLGKL 497 (982)
Q Consensus 422 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 497 (982)
.+++|++|++++|.+.+..+...+......|++|++++|++++..+ ..+..+++|+.|+|++|++++..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 4567999999999999887765432345689999999999998666 345679999999999999999999999999
Q ss_pred CCCCeEEeeccCCCCC---C-CcccCCCccccEEEccCCcCCcCCCc----cccCCCcccccccCCCccccc-ccccccc
Q 036229 498 QKLQGLHLEDNKLEGP---I-PDDICRLTKLYELGLSGNKLSGSIPA----CFSNLASLGTLSLGSNKLTSI-PLTIWNL 568 (982)
Q Consensus 498 ~~L~~L~Ls~N~l~~~---~-p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~i-p~~~~~l 568 (982)
++|++|+|++|++.+. . +..+..+++|++|+|++|+|+. +|. .+.++++|++|+|++|+++.+ |..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 9999999999998752 2 2334789999999999999973 333 356778888888888887754 5544432
Q ss_pred cCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeC
Q 036229 569 KGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNL 648 (982)
Q Consensus 569 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 648 (982)
. .+++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|+|
T Consensus 248 ~---------------------~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L 301 (310)
T 4glp_A 248 M---------------------WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTL 301 (310)
T ss_dssp C---------------------CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEEC
T ss_pred c---------------------CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEEC
Confidence 1 1245556666666665 3444443 6777778888877754 33 567778888888
Q ss_pred CCCcCCC
Q 036229 649 SNNNLSR 655 (982)
Q Consensus 649 s~N~l~~ 655 (982)
++|+|+.
T Consensus 302 ~~N~l~~ 308 (310)
T 4glp_A 302 DGNPFLV 308 (310)
T ss_dssp SSTTTSC
T ss_pred cCCCCCC
Confidence 8887763
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.4e-25 Score=248.23 Aligned_cols=230 Identities=17% Similarity=0.149 Sum_probs=178.2
Q ss_pred EEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCc----chhhhcc-CCcEEEccCCcccCccCccccCc-----CC
Q 036229 85 VLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIP----SAIFTLY-TLKYVNFRGNQLSGAFPSFIFNK-----SS 154 (982)
Q Consensus 85 ~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 154 (982)
..++++++++|.+|..+...++|++|||++|.+++..+ .++..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36789999999999888888889999999999987666 6777888 99999999999998888877775 99
Q ss_pred CCccccccCcccccCchhh---hcCC-CCCCeeeecceeeecccCCCcc----C-cCcccEEEeeccccccccc----cc
Q 036229 155 LQHLDFSYNALSGEIPANI---CSNL-PFLESISLSQNMFHGRIPSALS----N-CKYLEILSLSINNLLGAIP----KE 221 (982)
Q Consensus 155 L~~L~Ls~N~l~~~ip~~~---~~~l-~~L~~L~Ls~N~l~~~~p~~~~----~-l~~L~~L~Ls~N~l~~~~p----~~ 221 (982)
|++|||++|.+++..+..+ +..+ ++|++|+|++|++++..+..+. . .++|++|+|++|++++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999996665543 2444 8999999999999877665543 3 3699999999999986443 34
Q ss_pred ccccc-chhhhhccCCCCCCchhhhcC----CC-cccceEeccccccCCc----CChhhhcc-CCCcEEEccCCccccCC
Q 036229 222 IGNLT-KLKELYLGYSGLQGEIPREFG----NL-AELELMALQVSNLQGE----IPQELANL-TGLEVLKLGKNFLTGEI 290 (982)
Q Consensus 222 ~~~l~-~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~L~~n~l~~~----~p~~l~~l-~~L~~L~Ls~N~l~~~~ 290 (982)
+..++ +|++|+|++|++++..+..+. .+ ++|+.|++++|.+.+. ++..+..+ ++|++|+|++|.|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45554 899999999998877665444 34 5888888888888763 34455553 48888888888887654
Q ss_pred C----ccccccCCCcEEEccCccccccC
Q 036229 291 P----PEIHNLHNLKLLDLSHNKLVGAV 314 (982)
Q Consensus 291 p----~~~~~l~~L~~L~Ls~N~l~~~~ 314 (982)
+ ..+..+++|++|+|++|.+.+..
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~ 269 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMS 269 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccC
Confidence 4 33456677888888888855443
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2.2e-23 Score=219.88 Aligned_cols=203 Identities=20% Similarity=0.215 Sum_probs=132.4
Q ss_pred cCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCc-ccCccCccccCcCCCCcccccc-CcccccCchhh
Q 036229 96 TIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQ-LSGAFPSFIFNKSSLQHLDFSY-NALSGEIPANI 173 (982)
Q Consensus 96 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~ip~~~ 173 (982)
.+|. +. .+|++|++++|++++..+.++..+++|++|+|++|+ +++..+..|.++++|++|++++ |.++ .+|+..
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~ 100 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDA 100 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTS
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHH
Confidence 5665 33 378889998888886656678888888888888886 7755555778888888888887 7877 566666
Q ss_pred hcCCCCCCeeeecceeeecccCCCccCcCccc---EEEeecc-ccccccccccccccchh-hhhccCCCCCCchhhhcCC
Q 036229 174 CSNLPFLESISLSQNMFHGRIPSALSNCKYLE---ILSLSIN-NLLGAIPKEIGNLTKLK-ELYLGYSGLQGEIPREFGN 248 (982)
Q Consensus 174 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~ 248 (982)
|.++++|++|++++|++++ +|. |..+++|+ +|++++| ++++..+..|..+++|+ +|++++|+++...+..|..
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~ 178 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG 178 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT
T ss_pred hCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC
Confidence 6778888888888888775 554 77777776 7777777 77755555677777777 7777777776322223333
Q ss_pred CcccceEeccccc-cCCcCChhhhcc-CCCcEEEccCCccccCCCccccccCCCcEEEccCc
Q 036229 249 LAELELMALQVSN-LQGEIPQELANL-TGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHN 308 (982)
Q Consensus 249 l~~L~~L~L~~n~-l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 308 (982)
++|+.|++++|+ +++..+..|.++ ++|++|++++|++++..+. .+++|+.|+++++
T Consensus 179 -~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 -TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp -CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred -CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 555555555552 554444445555 5555555555555533222 3344555554443
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=1.4e-24 Score=241.92 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=173.6
Q ss_pred CCEEEcCCCCccccCcchhhhc--cCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeee
Q 036229 107 LQSLNLGFNRLSGSIPSAIFTL--YTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESIS 184 (982)
Q Consensus 107 L~~L~L~~n~~~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~ 184 (982)
++.+|+++|.+. |..+..+ +++++|++++|.+++..+. +.++++|++|+|++|.+++..
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~--------------- 109 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST--------------- 109 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH---------------
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH---------------
Confidence 456666666554 3445555 5666666666666544333 334555555555555544320
Q ss_pred ecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCC-CCCC-chhhhcCCCcccceEecccc-c
Q 036229 185 LSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYS-GLQG-EIPREFGNLAELELMALQVS-N 261 (982)
Q Consensus 185 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~~~~~~~l~~L~~L~L~~n-~ 261 (982)
+|..+..+++|++|+|++|++++..|..++.+++|++|+|++| .+++ .++..+.++++|+.|++++| .
T Consensus 110 ---------~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~ 180 (336)
T 2ast_B 110 ---------LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFD 180 (336)
T ss_dssp ---------HHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTT
T ss_pred ---------HHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCC
Confidence 3444445555555555555555555555555666666666666 4554 25666777888888888888 8
Q ss_pred cCCc-CChhhhccC-CCcEEEccCC--ccc-cCCCccccccCCCcEEEccCcc-ccccCcccccCCCCCceeecCCCc-C
Q 036229 262 LQGE-IPQELANLT-GLEVLKLGKN--FLT-GEIPPEIHNLHNLKLLDLSHNK-LVGAVPATIFNMSTLTGLGLQSNS-L 334 (982)
Q Consensus 262 l~~~-~p~~l~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l 334 (982)
+++. ++..+..++ +|++|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|+.|++++|. +
T Consensus 181 l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~ 260 (336)
T 2ast_B 181 FTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDI 260 (336)
T ss_dssp CCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTC
T ss_pred cChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCC
Confidence 8764 577799999 9999999999 555 4567778899999999999999 777788899999999999999996 2
Q ss_pred CCCcCccccccCCCccEEEccCCcccccccccccCC-CCCCEEEeccccCccccCCcccc
Q 036229 335 SGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNA-SKLSVLELGRNSFSGFIPNTFGN 393 (982)
Q Consensus 335 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~i~~~~~~~~~~ 393 (982)
.. ..-.....+++|++|++++| +.. ..+..+ ..++.|+++.|++++..|..++.
T Consensus 261 ~~-~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 261 IP-ETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CG-GGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CH-HHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 21 11123457899999999999 443 233333 34778889999999999988775
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2.7e-25 Score=252.59 Aligned_cols=256 Identities=24% Similarity=0.259 Sum_probs=137.0
Q ss_pred cCcchhhhccCCcEEEccCCcccCccC----ccccCcCCCCccccccC---cccccCchhh------hcCCCCCCeeeec
Q 036229 120 SIPSAIFTLYTLKYVNFRGNQLSGAFP----SFIFNKSSLQHLDFSYN---ALSGEIPANI------CSNLPFLESISLS 186 (982)
Q Consensus 120 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~ip~~~------~~~l~~L~~L~Ls 186 (982)
.++..+..+++|++|+|++|++++..+ ..+..+++|++|+|++| .+++.+|..+ +..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 345555666666666666666654422 33556666666666664 3444555443 2456666666666
Q ss_pred ceeeec----ccCCCccCcCcccEEEeeccccccccccccccc-cchhhhhccCCCCCCchhhhcCCCcccceEeccccc
Q 036229 187 QNMFHG----RIPSALSNCKYLEILSLSINNLLGAIPKEIGNL-TKLKELYLGYSGLQGEIPREFGNLAELELMALQVSN 261 (982)
Q Consensus 187 ~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 261 (982)
+|.+++ .+|..+..+++|++|+|++|++++..+..+... ..+.. |++++ ..++|+.|++++|+
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~-----~~~~~-------~~~~L~~L~L~~n~ 170 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAV-----NKKAK-------NAPPLRSIICGRNR 170 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHH-----HHHHH-------TCCCCCEEECCSSC
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhh-----hhhcc-------cCCCCcEEECCCCC
Confidence 666665 355566666677777777776654333333221 00000 00000 00334444444444
Q ss_pred cC-CcCC---hhhhccCCCcEEEccCCcccc-----CCCccccccCCCcEEEccCcccc----ccCcccccCCCCCceee
Q 036229 262 LQ-GEIP---QELANLTGLEVLKLGKNFLTG-----EIPPEIHNLHNLKLLDLSHNKLV----GAVPATIFNMSTLTGLG 328 (982)
Q Consensus 262 l~-~~~p---~~l~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~ 328 (982)
++ +.+| ..+..+++|++|+|++|+|+. ..|..+..+++|++|+|++|.++ +.+|..+..+++|+.|+
T Consensus 171 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~ 250 (386)
T 2ca6_A 171 LENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELG 250 (386)
T ss_dssp CTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEE
T ss_pred CCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEE
Confidence 43 1222 234455555555555555541 22224555555555555555553 34455555555555555
Q ss_pred cCCCcCCCCc-----CccccccCCCccEEEccCCcccc----cccccc-cCCCCCCEEEeccccCcccc
Q 036229 329 LQSNSLSGSL-----SSIADVQLPNLEELRLWSNNFSG----TIPRFI-FNASKLSVLELGRNSFSGFI 387 (982)
Q Consensus 329 L~~N~l~~~~-----~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~i~~~~ 387 (982)
|++|.+++.. .......+++|++|+|++|.+++ .+|..+ .++++|++|++++|++++..
T Consensus 251 L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 251 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 5555554321 11111235677888888888876 466666 55788888888888888654
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.1e-25 Score=253.53 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=177.0
Q ss_pred cCCccccCCCCCCEEEcCCCCccccCcc----hhhhccCCcEEEccCC---cccCccCccc-------cCcCCCCccccc
Q 036229 96 TIPSQLWNLSSLQSLNLGFNRLSGSIPS----AIFTLYTLKYVNFRGN---QLSGAFPSFI-------FNKSSLQHLDFS 161 (982)
Q Consensus 96 ~~~~~l~~l~~L~~L~L~~n~~~~~~p~----~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls 161 (982)
.++..+..+++|++|+|++|.+++..+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 5667788889999999999998866443 4668899999999995 4556667655 688999999999
Q ss_pred cCcccc----cCchhhhcCCCCCCeeeecceeeecccCCCcc----Cc---------CcccEEEeeccccc-cccc---c
Q 036229 162 YNALSG----EIPANICSNLPFLESISLSQNMFHGRIPSALS----NC---------KYLEILSLSINNLL-GAIP---K 220 (982)
Q Consensus 162 ~N~l~~----~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l---------~~L~~L~Ls~N~l~-~~~p---~ 220 (982)
+|.+++ .+|..+ ..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+| .
T Consensus 103 ~n~l~~~~~~~l~~~l-~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 181 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFL-SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAK 181 (386)
T ss_dssp SCCCCTTTHHHHHHHH-HHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHH
T ss_pred CCcCCHHHHHHHHHHH-HhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHH
Confidence 999986 366565 7889999999999999755444443 33 88999999999987 3444 4
Q ss_pred ccccccchhhhhccCCCCCC-----chhhhcCCCcccceEeccccccC----CcCChhhhccCCCcEEEccCCccccC--
Q 036229 221 EIGNLTKLKELYLGYSGLQG-----EIPREFGNLAELELMALQVSNLQ----GEIPQELANLTGLEVLKLGKNFLTGE-- 289 (982)
Q Consensus 221 ~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~n~l~----~~~p~~l~~l~~L~~L~Ls~N~l~~~-- 289 (982)
.+..+++|++|+|++|+++. ..|..+..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|+|++.
T Consensus 182 ~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~ 261 (386)
T 2ca6_A 182 TFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGA 261 (386)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHH
T ss_pred HHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhH
Confidence 66778888888888888872 34446777788888888888775 55667777778888888888887754
Q ss_pred --CCcccc--ccCCCcEEEccCccccc----cCcccc-cCCCCCceeecCCCcCCC
Q 036229 290 --IPPEIH--NLHNLKLLDLSHNKLVG----AVPATI-FNMSTLTGLGLQSNSLSG 336 (982)
Q Consensus 290 --~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~ 336 (982)
++..+. .+++|++|+|++|.+++ .+|..+ .++++|+.|++++|.+++
T Consensus 262 ~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 262 AAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 345553 37777888888887776 355555 446666666666665553
No 342
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=9.7e-25 Score=256.79 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=122.0
Q ss_pred CCCccceeeeeceEEEEEEEeCCCeEEEEEEeeccc--------chhhhhHHHHHHHhhhcCCccceeEEeeecCCCeeE
Q 036229 781 RFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC--------GRAFKSFDVECEMMKSIRHRNLIKVISSCSTEEFKA 852 (982)
Q Consensus 781 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 852 (982)
.+...+.||+|+||.||+|+. .++.+|+|+..... ....+++.+|++++++++||||+++..++...+..|
T Consensus 337 ~~~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 337 RKIPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp -----------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred cCCCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence 335567999999999999965 57788888864321 112356899999999999999995555555666779
Q ss_pred EEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCceeecC
Q 036229 853 LILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLLIG 932 (982)
Q Consensus 853 lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 932 (982)
+||||+++++|.+++.. +..++.|+++||+||| ++||+||||||+||++++ .+||+|||+|+....
T Consensus 416 lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999999865 4679999999999999 999999999999999998 999999999998643
Q ss_pred CCCce-----eecccccccccccCceeee
Q 036229 933 EDQSI-----TQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 933 ~~~~~-----~~~~~~gt~~y~aPE~~~~ 956 (982)
..... ......||+.|||||++..
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~ 510 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWER 510 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence 22111 1235689999999999976
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=3.8e-23 Score=226.56 Aligned_cols=195 Identities=27% Similarity=0.358 Sum_probs=148.7
Q ss_pred cccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCccc
Q 036229 470 IGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLG 549 (982)
Q Consensus 470 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 549 (982)
+..+++|+.|++++|.++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++. + .+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCC
Confidence 3456677777777777764 33 46777777888888877775433 77777788888888877753 3 577777888
Q ss_pred ccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccc
Q 036229 550 TLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRL 629 (982)
Q Consensus 550 ~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 629 (982)
+|+|++|+++.+|. +..+++|++|++++|++++..+ ++.+++|+.|++++|++++..+ +..+++|++|+|++|++
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 88888888877765 6677788888888888776544 7788888888888888877544 88888888999998888
Q ss_pred cCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccc
Q 036229 630 QGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKG 679 (982)
Q Consensus 630 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 679 (982)
++..+ +..+++|+.|+|++|++++.. .+..+++|++|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 86544 788888999999999888654 37888889999999998875
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=7.8e-23 Score=217.30 Aligned_cols=182 Identities=28% Similarity=0.343 Sum_probs=124.1
Q ss_pred cccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCccccccc
Q 036229 474 TNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSL 553 (982)
Q Consensus 474 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (982)
.+.+.++++++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45677888888887 4554444 57888888888888777777888888888888888888777777777777777777
Q ss_pred CCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCc
Q 036229 554 GSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSI 633 (982)
Q Consensus 554 ~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 633 (982)
++|+++.+|.. .+..+++|+.|+|++|+|++..+..|+.+++|++|+|++|+|++..
T Consensus 91 ~~n~l~~~~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 91 ANNQLASLPLG-----------------------VFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TTSCCCCCCTT-----------------------TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCcccccChh-----------------------HhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 77777766543 3444455555555555555555555666666666666666666555
Q ss_pred cccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccC
Q 036229 634 SESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEI 681 (982)
Q Consensus 634 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 681 (982)
+..|+++++|+.|+|++|++++..|..+..+++|++|+|++|+++|..
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 556666666666666666666655556666666666666666666553
No 345
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.89 E-value=1.5e-23 Score=229.28 Aligned_cols=144 Identities=21% Similarity=0.357 Sum_probs=126.5
Q ss_pred hcCCCcc-ceeeeeceEEEEEEEe-CCCeEEEEEEeecccchhhhhHHHHHHHh-hhcCCccceeEEeeecC----CCee
Q 036229 779 TNRFSEN-NLIGRGGFGSVYKARI-GEGMEVAVKVFDLQCGRAFKSFDVECEMM-KSIRHRNLIKVISSCST----EEFK 851 (982)
Q Consensus 779 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~ 851 (982)
.++|.+. +.||+|+||.||+|+. .+++.||+|+++.. ..+.+|++++ +..+||||+++++++.. ....
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 4667776 7899999999999986 46899999998632 4567888888 56699999999999876 6788
Q ss_pred EEEEEeccCCChHHHHhcCC-CcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC---CCcEEEEeecCc
Q 036229 852 ALILEYMPHGSLEKSLYSSN-YILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD---NMVAHLSDFGIA 927 (982)
Q Consensus 852 ~lv~E~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~---~~~~kL~DFGla 927 (982)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| ++||+||||||+||+++. ++.+||+|||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 99999999999999998653 36899999999999999999999 999999999999999997 789999999999
Q ss_pred eee
Q 036229 928 KLL 930 (982)
Q Consensus 928 ~~~ 930 (982)
...
T Consensus 168 ~~~ 170 (299)
T 3m2w_A 168 KET 170 (299)
T ss_dssp EEC
T ss_pred ccc
Confidence 865
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.5e-22 Score=221.88 Aligned_cols=179 Identities=26% Similarity=0.414 Sum_probs=140.7
Q ss_pred ccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcc
Q 036229 469 EIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASL 548 (982)
Q Consensus 469 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 548 (982)
.+..+++|+.|++++|++++..+ +..+++|++|+|++|++++. +.+..+++|+.|++++|++++. + .+..+++|
T Consensus 58 ~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L 131 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNL 131 (308)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTC
T ss_pred hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCC
Confidence 46677788888888888876554 78888888888888888753 3677888888888888888754 3 27888888
Q ss_pred cccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc
Q 036229 549 GTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR 628 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 628 (982)
++|++++|+++.+|. +..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|++|+|++|+
T Consensus 132 ~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 132 QVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSC
T ss_pred CEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCc
Confidence 888888888887776 6678888888888888886544 7888888888888888877654 7888889999999999
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCCCCCccc
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSRSIPISL 661 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 661 (982)
+++..+ +..+++|+.|+|++|++++ .|..+
T Consensus 207 l~~~~~--l~~l~~L~~L~l~~N~i~~-~~~~~ 236 (308)
T 1h6u_A 207 ISDVSP--LANTSNLFIVTLTNQTITN-QPVFY 236 (308)
T ss_dssp CCBCGG--GTTCTTCCEEEEEEEEEEC-CCEEC
T ss_pred cCcccc--ccCCCCCCEEEccCCeeec-CCeee
Confidence 886553 8888899999999999875 44433
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=3.2e-22 Score=223.67 Aligned_cols=138 Identities=17% Similarity=0.068 Sum_probs=89.3
Q ss_pred ccccccccce-EEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccC-CcCCcCCCccccCCC
Q 036229 469 EIGNLTNLIG-IYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSG-NKLSGSIPACFSNLA 546 (982)
Q Consensus 469 ~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~ 546 (982)
.|.+++++.. +.+++|+++.+.|..|..+++|++|++++|+|++..+..+....++..|++++ |++..+.+..|..+.
T Consensus 74 ~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~ 153 (350)
T 4ay9_X 74 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS 153 (350)
T ss_dssp SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB
T ss_pred HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc
Confidence 4555666553 55666777777778888888888888888888876666777777778888755 667766666777664
Q ss_pred -cccccccCCCcccccccccccccCceEEecCC-CcccCCCccccccccccceeeccccccc
Q 036229 547 -SLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSS-NFFTGPLPLDIGNLKVLIGIDFSTNNFS 606 (982)
Q Consensus 547 -~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~Ldls~N~l~ 606 (982)
.++.|+|++|+|++||...+...+++.|++++ |.++...+..|.++++|+.||+|+|+|+
T Consensus 154 ~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~ 215 (350)
T 4ay9_X 154 FESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH 215 (350)
T ss_dssp SSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC
T ss_pred hhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC
Confidence 57778888888888877776666666666653 3333222223334444444444444443
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.88 E-value=1.3e-23 Score=246.88 Aligned_cols=213 Identities=24% Similarity=0.334 Sum_probs=149.0
Q ss_pred CCCCCCCCCC-----ceeeE-EecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcE
Q 036229 60 KNWNTSTPVC-----NWTGV-TCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKY 133 (982)
Q Consensus 60 ~~w~~~~~~c-----~w~gv-~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~ 133 (982)
.+|..+.++| .|.|+ .|. .++++.|+|+++++++ +|..+. ++|++|+|++|+++ .+| ..+++|++
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~--~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECL--INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHH--HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHhccCCccccccchhhhccccc--cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 4565555667 79999 787 3578999999999986 787664 78999999999998 778 45789999
Q ss_pred EEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccc
Q 036229 134 VNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINN 213 (982)
Q Consensus 134 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 213 (982)
|+|++|+|++ +|. +.+ +|++|+|++|.+++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|++|+
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 9999999986 777 655 89999999999885 776 47888888888888886 554 56788888888888
Q ss_pred cccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCcc
Q 036229 214 LLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPE 293 (982)
Q Consensus 214 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 293 (982)
+++ +|. |. ++|++|+|++|+|+ .+|. |.. +| +...+.|++|+|++|+|+ .+|..
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC---------------------------CCEEEECCSSCCC-CCCGG
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hh-----------------hcccccceEEecCCCcce-ecCHH
Confidence 875 665 55 77888888888877 4444 433 33 011122355555555555 34444
Q ss_pred ccccCCCcEEEccCccccccCcccccC
Q 036229 294 IHNLHNLKLLDLSHNKLVGAVPATIFN 320 (982)
Q Consensus 294 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 320 (982)
+..+++|+.|+|++|++++..|..+..
T Consensus 226 l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 226 ILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp GGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred HhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 445555555555555555555555444
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=3e-22 Score=223.92 Aligned_cols=243 Identities=17% Similarity=0.115 Sum_probs=186.2
Q ss_pred cEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEecCCCCCCCCC-ccccCcCCCCe-EE
Q 036229 427 TYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIP-ITLGKLQKLQG-LH 504 (982)
Q Consensus 427 ~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~ 504 (982)
++++.++|+++.++... +.++++|++++|+|+...+..|.++++|+.|+|++|++.+.+| .+|.+++++++ +.
T Consensus 12 ~~v~C~~~~Lt~iP~~l-----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDL-----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSCCTTC-----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCccCcCc-----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 46777777777765433 3567888888888887777789999999999999999866554 67889988775 66
Q ss_pred eeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCC-Ccccccccccc-cc-cCceEEecCCCcc
Q 036229 505 LEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS-NKLTSIPLTIW-NL-KGMLYLNFSSNFF 581 (982)
Q Consensus 505 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~ip~~~~-~l-~~L~~L~Ls~N~l 581 (982)
++.|+|++..|+.|..+++|++|++++|+|++..+..+....++..|++.+ |+++.+|...+ .+ ..+++|++++|++
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i 166 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGI 166 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCC
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccc
Confidence 778999988889999999999999999999988777888888888898865 68888886543 33 4688899999999
Q ss_pred cCCCccccccccccceeeccc-ccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcc
Q 036229 582 TGPLPLDIGNLKVLIGIDFST-NNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPIS 660 (982)
Q Consensus 582 ~~~~~~~~~~l~~L~~Ldls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 660 (982)
+...+ ......+|+.+++++ |.++.+.+..|+++++|++|+|++|+|+..++..|.++++|+.+++ ++++ .+| .
T Consensus 167 ~~i~~-~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~ 241 (350)
T 4ay9_X 167 QEIHN-SAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-T 241 (350)
T ss_dssp CEECT-TSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-C
T ss_pred cCCCh-hhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-C
Confidence 85444 444556788899875 6676655567899999999999999998666656655554444333 3343 566 4
Q ss_pred cccccccceeecCCCcccc
Q 036229 661 LEKLSYLEDLDLSFNKLKG 679 (982)
Q Consensus 661 l~~l~~L~~l~ls~N~l~~ 679 (982)
+.++++|+.++++++.-++
T Consensus 242 l~~l~~L~~l~l~~~~~c~ 260 (350)
T 4ay9_X 242 LEKLVALMEASLTYPSHCC 260 (350)
T ss_dssp TTTCCSCCEEECSCHHHHH
T ss_pred chhCcChhhCcCCCCcccc
Confidence 7888999999998765543
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.6e-22 Score=204.89 Aligned_cols=183 Identities=20% Similarity=0.258 Sum_probs=122.6
Q ss_pred CceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCcc
Q 036229 69 CNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSF 148 (982)
Q Consensus 69 c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 148 (982)
|.|.+|.|+. ++++ .+|..+ .++|++|++++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 7 C~~~~v~c~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (208)
T 2o6s_A 7 CSGTTVECYS------------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV 71 (208)
T ss_dssp EETTEEECCS------------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred ECCCEEEecC------------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh
Confidence 7899999972 2233 344433 347788888888887555556677888888888888887555555
Q ss_pred ccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccch
Q 036229 149 IFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKL 228 (982)
Q Consensus 149 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 228 (982)
+..+++|++|+|++|.++ .+|...|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|
T Consensus 72 ~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 150 (208)
T 2o6s_A 72 FNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 150 (208)
T ss_dssp TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred cCCCCCcCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc
Confidence 677777777777777777 5565555777777777777777776666667777777777777777775555556666677
Q ss_pred hhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccC
Q 036229 229 KELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLT 274 (982)
Q Consensus 229 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 274 (982)
++|++++|.+.+ .+++|+.|+++.|+++|.+|++++.++
T Consensus 151 ~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 151 QYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred cEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 777777666553 233455556666666666655555443
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.8e-22 Score=214.15 Aligned_cols=153 Identities=16% Similarity=0.135 Sum_probs=121.5
Q ss_pred HHHHHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccc------------------hhhhhHHHHHHHhhhcC
Q 036229 773 LELCRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCG------------------RAFKSFDVECEMMKSIR 834 (982)
Q Consensus 773 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 834 (982)
..+......|.+.+.||+|+||.||+|+..+|+.||+|+++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455667788899999999999999997799999999864321 13456889999999998
Q ss_pred CccceeEEeeecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEc
Q 036229 835 HRNLIKVISSCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLD 914 (982)
Q Consensus 835 h~nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~ 914 (982)
| +++.+++.. +..++||||++|++|.+ +.. .....++.|++.|++||| ++||+||||||+||+++
T Consensus 163 ~---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 G---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp T---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred C---CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 5 444444432 55699999999999988 422 124569999999999999 99999999999999999
Q ss_pred CCCcEEEEeecCceeecCCCCceeecccccccccccCceeee
Q 036229 915 DNMVAHLSDFGIAKLLIGEDQSITQTQTLATIGYMAPGLFHV 956 (982)
Q Consensus 915 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 956 (982)
++.+||+|||+|+.. ..|+|||++..
T Consensus 228 -~~~vkl~DFG~a~~~---------------~~~~a~e~l~r 253 (282)
T 1zar_A 228 -EEGIWIIDFPQSVEV---------------GEEGWREILER 253 (282)
T ss_dssp -TTEEEECCCTTCEET---------------TSTTHHHHHHH
T ss_pred -CCcEEEEECCCCeEC---------------CCCCHHHHHHH
Confidence 999999999998742 34788888753
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.1e-21 Score=230.50 Aligned_cols=169 Identities=26% Similarity=0.303 Sum_probs=94.4
Q ss_pred cccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCccccccc
Q 036229 474 TNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSL 553 (982)
Q Consensus 474 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 553 (982)
++|+.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. +.. +|+.|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 34555555555555 233 234555555555555554 444 433 55555555555554 333 3455555555
Q ss_pred CCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCc-------ceEeccc
Q 036229 554 GSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNL-------QYLFLGY 626 (982)
Q Consensus 554 ~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L-------~~L~Ls~ 626 (982)
++|+|+.+|. .+++|++|++++|++++ +|. +. ++|+.|||++|+|+. +|. |.. +| +.|+|++
T Consensus 148 s~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 148 DNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-LPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-CCC-CC----------CCEEEECCS
T ss_pred CCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-hhh-HHH--hhhcccccceEEecCC
Confidence 5555555554 34455555555555554 333 43 556666666666653 343 433 55 7777777
Q ss_pred ccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccc
Q 036229 627 NRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSY 666 (982)
Q Consensus 627 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 666 (982)
|+|+ .+|..+..+++|+.|+|++|+|++.+|..+..++.
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 7776 45666666777777777777777777766665543
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.1e-20 Score=194.62 Aligned_cols=161 Identities=27% Similarity=0.263 Sum_probs=77.7
Q ss_pred ccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccC
Q 036229 475 NLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLG 554 (982)
Q Consensus 475 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 554 (982)
+|+.|++++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44555555555554444445555555555555555554444444555555555555555554444444445555555555
Q ss_pred CCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCcc
Q 036229 555 SNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSIS 634 (982)
Q Consensus 555 ~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 634 (982)
+|+++.+|. ..+..+++|+.|++++|++++..+..|..+++|++|+|++|.+.+.
T Consensus 109 ~N~l~~~~~-----------------------~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-- 163 (208)
T 2o6s_A 109 TNQLQSLPD-----------------------GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-- 163 (208)
T ss_dssp SSCCCCCCT-----------------------TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC--
T ss_pred CCcCcccCH-----------------------hHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC--
Confidence 554444443 3333444444444444444444444444455555555555544322
Q ss_pred ccccCCCCCCeeeCCCCcCCCCCCccccccc
Q 036229 635 ESFGDLISLKSLNLSNNNLSRSIPISLEKLS 665 (982)
Q Consensus 635 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 665 (982)
+++|+.|+++.|+++|.+|..++.++
T Consensus 164 -----~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 164 -----CPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp -----TTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred -----CCCHHHHHHHHHhCCceeeccCcccc
Confidence 23445555555555555555444443
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=3.5e-21 Score=199.76 Aligned_cols=157 Identities=25% Similarity=0.318 Sum_probs=114.7
Q ss_pred CeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCC-ccccCCCcccccccCCCcccccccccccccCceEEecCCC
Q 036229 501 QGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIP-ACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSN 579 (982)
Q Consensus 501 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 579 (982)
+.+++++|.++. +|..+. ..+++|+|++|+|++..| ..|.++++|++|+|++|+|+.+
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i------------------ 72 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI------------------ 72 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE------------------
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE------------------
Confidence 366777777763 454442 234666666666665533 3355555555555555555544
Q ss_pred cccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCc
Q 036229 580 FFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPI 659 (982)
Q Consensus 580 ~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 659 (982)
.+..|.++++|+.|+|++|++++..|..|+.+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|.
T Consensus 73 -----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 73 -----EEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred -----CHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 445566677777778888888777777888888888888888888888888888888899999999999888888
Q ss_pred ccccccccceeecCCCcccccCCC
Q 036229 660 SLEKLSYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 660 ~l~~l~~L~~l~ls~N~l~~~~p~ 683 (982)
.|..+++|++|+|++|++.|.++-
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECSGGG
T ss_pred HhcCCCCCCEEEecCcCCcCCCch
Confidence 888888899999999999887764
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=8.4e-21 Score=206.03 Aligned_cols=189 Identities=25% Similarity=0.347 Sum_probs=121.7
Q ss_pred cceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCC
Q 036229 476 LIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS 555 (982)
Q Consensus 476 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 555 (982)
+..+.++.+.+++..+ +..+++|+.|++++|.+++. + .+..+++|+.|+|++|++++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3334444555443222 33455566666666666533 2 35556666666666666654433 56666666666666
Q ss_pred CcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccc
Q 036229 556 NKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISE 635 (982)
Q Consensus 556 N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 635 (982)
|+++.+|. +..+++|++|++++|++++. ..+..+++|+.|++++|++++. ..++.+++|++|+|++|++++..|
T Consensus 100 n~l~~~~~-l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 100 NKVKDLSS-LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp SCCCCGGG-GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CcCCCChh-hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 66666553 55566666666666666653 3466677777777777777665 467778888888888888876554
Q ss_pred cccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccc
Q 036229 636 SFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKG 679 (982)
Q Consensus 636 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 679 (982)
+..+++|+.|+|++|++++ +| .+..+++|+.|++++|+++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 7788888888888888875 44 47778888888888888764
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=1.2e-21 Score=239.02 Aligned_cols=235 Identities=19% Similarity=0.217 Sum_probs=125.8
Q ss_pred CCChhHHHHHHHHHHHhcCCCCccccCCCC-CCCCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCE---
Q 036229 34 SSITTDQDALLALKAHITHDPTNFLAKNWN-TSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQS--- 109 (982)
Q Consensus 34 ~~~~~~~~~ll~~k~~~~~~~~~~~~~~w~-~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~--- 109 (982)
+....++++|.++....... ....-..|. ..+..+.|.++.++ .++++.|+|.++++.. ++..+....+|..
T Consensus 128 s~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i 203 (727)
T 4b8c_D 128 SLVDCTKQALMEMADTLTDS-KTAKKQQPTGDSTPSGTATNSAVS--TPLTPKIELFANGKDE-ANQALLQHKKLSQYSI 203 (727)
T ss_dssp ----CCCHHHHHHHHHHHHH-HTTC-------------------------------------------------------
T ss_pred hccccchhhhhhhhhhcccc-cCcccCCCcCCCCccccCCCceec--CCccceEEeeCCCCCc-chhhHhhcCccCcccc
Confidence 45577889999998877542 111223453 34556789999887 5789999999999885 4444433332322
Q ss_pred --EEcCCCCccccCcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecc
Q 036229 110 --LNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQ 187 (982)
Q Consensus 110 --L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~ 187 (982)
++++.|.+. ..|..+..+++|+.|+|++|.+. .+|..++++++|++|+|++|.|+ .+|..+ .++++|+.|+|++
T Consensus 204 ~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~-~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 204 DEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEI-KNLSNLRVLDLSH 279 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGG-GGGTTCCEEECTT
T ss_pred cCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhh-hCCCCCCEEeCcC
Confidence 233334443 45677888888899999988888 77887888888888888888888 788776 7888888888888
Q ss_pred eeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcc-cceEeccccccCCcC
Q 036229 188 NMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAE-LELMALQVSNLQGEI 266 (982)
Q Consensus 188 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~ 266 (982)
|+|+ .+|..|+++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..+++++|.+++.+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 8888 67888888888888888888887 67777888888888888888888888887765432 234677788887777
Q ss_pred ChhhhccCCCcEEEccCC
Q 036229 267 PQELANLTGLEVLKLGKN 284 (982)
Q Consensus 267 p~~l~~l~~L~~L~Ls~N 284 (982)
|.. |+.|++++|
T Consensus 358 p~~------l~~l~l~~n 369 (727)
T 4b8c_D 358 PHE------RRFIEINTD 369 (727)
T ss_dssp CCC---------------
T ss_pred ccc------cceeEeecc
Confidence 653 455566666
No 357
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=2.8e-20 Score=194.36 Aligned_cols=163 Identities=22% Similarity=0.262 Sum_probs=104.2
Q ss_pred CCCCCCCCCCceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCC
Q 036229 60 KNWNTSTPVCNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGN 139 (982)
Q Consensus 60 ~~w~~~~~~c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N 139 (982)
.-|..++..|+|.+|.|+ +++++ .+|..+. ++|+.|+|++|++++..|..+..+++|++|+|++|
T Consensus 10 ~~~~~~~~~Cs~~~v~c~------------~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 10 SAACPSQCSCSGTTVDCR------------SKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp -CCCCTTCEEETTEEECT------------TSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hccCCCCCEEeCCEeEcc------------CCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 345567788999999998 22333 5565443 67777888877777766777777777777777777
Q ss_pred cccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccc
Q 036229 140 QLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIP 219 (982)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 219 (982)
+|+...+..|..+++|++|+|++|.++ .+|+..|..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCH
Confidence 776444445566666666666666666 455555566666666666666665 455555666666666666666654444
Q ss_pred cccccccchhhhhccCCCCC
Q 036229 220 KEIGNLTKLKELYLGYSGLQ 239 (982)
Q Consensus 220 ~~~~~l~~L~~L~L~~N~l~ 239 (982)
..|..+++|++|+|++|.++
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBC
T ss_pred HHHhCCCCCCEEEeeCCCcc
Confidence 44555555555555555554
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.2e-20 Score=195.65 Aligned_cols=156 Identities=22% Similarity=0.337 Sum_probs=110.7
Q ss_pred CeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCc
Q 036229 501 QGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNF 580 (982)
Q Consensus 501 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~ 580 (982)
+.+++++|.++ .+|..+. ++|+.|+|++|+|+++.+..|.++++|++|+|++|+++.+
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~------------------- 71 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL------------------- 71 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE-------------------
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc-------------------
Confidence 45677777776 4454443 5666777777777666555666666666666666665544
Q ss_pred ccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcc
Q 036229 581 FTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPIS 660 (982)
Q Consensus 581 l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 660 (982)
.|..|.++++|+.|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..
T Consensus 72 ----~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 72 ----APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp ----CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ----CHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 4455666666777777777776666666777888888888888888777788888888888888888888777777
Q ss_pred cccccccceeecCCCcccccCC
Q 036229 661 LEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 661 l~~l~~L~~l~ls~N~l~~~~p 682 (982)
|..+++|++|+|++|++.+..+
T Consensus 148 ~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp TTTCTTCCEEECCSSCEECSGG
T ss_pred HhCCCCCCEEEeCCCCcCCCCc
Confidence 8888888888888888877554
No 359
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.4e-20 Score=208.08 Aligned_cols=180 Identities=26% Similarity=0.237 Sum_probs=127.3
Q ss_pred ceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccC-CCccccEEEccCCcCCcCCCccccCCCcccccccCC
Q 036229 477 IGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDIC-RLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGS 555 (982)
Q Consensus 477 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 555 (982)
+.+++++|+++. +|..+. +.++.|+|++|+|++..+..|. .+++|+.|+|++|+|+++.|..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 567777777774 444443 3467777777777766666666 677777777777777766666677777776666666
Q ss_pred CcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccc
Q 036229 556 NKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISE 635 (982)
Q Consensus 556 N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 635 (982)
|+|+.+|. ..|.++++|+.|+|++|+|+++.|..|..+++|++|+|++|+|++..+.
T Consensus 98 N~l~~~~~-----------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 98 NHLHTLDE-----------------------FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SCCCEECT-----------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CcCCcCCH-----------------------HHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 66665543 3455666677777777777777777888888888888888888865555
Q ss_pred cc---cCCCCCCeeeCCCCcCCCCCCcccccccc--cceeecCCCcccccCC
Q 036229 636 SF---GDLISLKSLNLSNNNLSRSIPISLEKLSY--LEDLDLSFNKLKGEIP 682 (982)
Q Consensus 636 ~~---~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~--L~~l~ls~N~l~~~~p 682 (982)
.| ..+++|+.|||++|+|++..+..+..++. |+.|+|++|++.+.+.
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHH
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcC
Confidence 56 56888888888888888665567777776 4788899988887653
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=2.6e-22 Score=237.29 Aligned_cols=188 Identities=20% Similarity=0.155 Sum_probs=95.9
Q ss_pred cCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCc-------------ccCccCccccCcCCCCccc-cccCcccc
Q 036229 102 WNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQ-------------LSGAFPSFIFNKSSLQHLD-FSYNALSG 167 (982)
Q Consensus 102 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 167 (982)
+..++|+.|+|++|+++ .+|.+++++++|++|++++|. +.+..|..++++++|++|| ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45666666666666665 666666666666666665554 3444455555555555555 4444332
Q ss_pred cCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcC
Q 036229 168 EIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFG 247 (982)
Q Consensus 168 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 247 (982)
.|+.+.+++|.++...+. .|+.|+|++|++++ +|. |+.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 -----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 -----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp -----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred -----------hhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 122333444444432211 24555555555553 343 555555555555555555 3444455
Q ss_pred CCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCC-CccccccCCCcEEEccCcccccc
Q 036229 248 NLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEI-PPEIHNLHNLKLLDLSHNKLVGA 313 (982)
Q Consensus 248 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~ 313 (982)
++++|+.|+|++|++++ +| .++++++|++|+|++|+|++.. |..|..+++|+.|+|++|++++.
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 55555555555555543 33 4455555555555555555443 44555555555555555555433
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=6.6e-20 Score=198.92 Aligned_cols=174 Identities=25% Similarity=0.352 Sum_probs=139.6
Q ss_pred cccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCccc
Q 036229 470 IGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLG 549 (982)
Q Consensus 470 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 549 (982)
+..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|++|++++|++++ +| .+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCC
Confidence 34667788888888888754 3 37778888888888888886544 7788888888888888875 33 378888888
Q ss_pred ccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccc
Q 036229 550 TLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRL 629 (982)
Q Consensus 550 ~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 629 (982)
+|+|++|+++.++ .+..+++|++|++++|++++. ..++.+++|+.|++++|++++..| +..+++|++|+|++|++
T Consensus 116 ~L~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 116 SLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EEECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 8888888888774 566788888888888888865 568888999999999999988765 88999999999999999
Q ss_pred cCCccccccCCCCCCeeeCCCCcCCCC
Q 036229 630 QGSISESFGDLISLKSLNLSNNNLSRS 656 (982)
Q Consensus 630 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 656 (982)
++. | .+..+++|+.|++++|+++..
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccCC
Confidence 864 4 489999999999999999853
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=3.5e-20 Score=220.29 Aligned_cols=188 Identities=24% Similarity=0.322 Sum_probs=104.2
Q ss_pred cEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCC
Q 036229 453 EYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGN 532 (982)
Q Consensus 453 ~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 532 (982)
..++++.+.+.+..+ +..+++|+.|++++|.++.. | .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 334445555544332 34556666666666666533 2 35666666666666666664433 556666666666666
Q ss_pred cCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeeccccccccccccc
Q 036229 533 KLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTV 612 (982)
Q Consensus 533 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~ 612 (982)
+|++ +| .+..+++|++|+|++|+++.+| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|+|++..|
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-- 170 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 170 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--
Confidence 6653 22 4566666666666666666553 344555566666666655543 345555555555555555555444
Q ss_pred ccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCC
Q 036229 613 IGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSR 655 (982)
Q Consensus 613 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 655 (982)
+..+++|+.|+|++|+|++. +.+..+++|+.|+|++|++++
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 55555555555555555542 235555555555555555554
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.1e-19 Score=216.19 Aligned_cols=169 Identities=29% Similarity=0.410 Sum_probs=87.8
Q ss_pred cccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEcc
Q 036229 451 SLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLS 530 (982)
Q Consensus 451 ~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 530 (982)
.|+.|++++|.+... | .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 44 ~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 44 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLE 117 (605)
T ss_dssp TCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECT
T ss_pred CCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEec
Confidence 455555555555432 1 35555555555555555554433 5555555555555555553 22 45555555555555
Q ss_pred CCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeeccccccccccc
Q 036229 531 GNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIP 610 (982)
Q Consensus 531 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p 610 (982)
+|+|++. ..+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|++++..| +..+++|+.|+|++|+|++.
T Consensus 118 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-- 190 (605)
T 1m9s_A 118 HNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-- 190 (605)
T ss_dssp TSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--
T ss_pred CCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--
Confidence 5555532 2355555555555555555554 334455555555555555554444 55555555555555555543
Q ss_pred ccccCccCcceEecccccccCC
Q 036229 611 TVIGGLTNLQYLFLGYNRLQGS 632 (982)
Q Consensus 611 ~~~~~l~~L~~L~Ls~N~l~~~ 632 (982)
..+..+++|+.|+|++|++++.
T Consensus 191 ~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 191 RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGGTTCTTCSEEECCSEEEECC
T ss_pred hHHccCCCCCEEEccCCcCcCC
Confidence 2355555555555555555543
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=2.2e-19 Score=186.23 Aligned_cols=152 Identities=20% Similarity=0.274 Sum_probs=86.5
Q ss_pred ccccccCcccccCchhhhcCCCCCCeeeecceeeecccC-CCccCcCcccEEEeeccccccccccccccccchhhhhccC
Q 036229 157 HLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIP-SALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGY 235 (982)
Q Consensus 157 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 235 (982)
++++++|.++ .+|..+ .+.+++|+|++|++++..| ..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 15 ~l~~s~n~l~-~iP~~~---~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHI---PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EeEeCCCCcc-cCccCC---CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4455555544 344433 1234555555555554433 3355555556666655555554444555555555555555
Q ss_pred CCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccc
Q 036229 236 SGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVG 312 (982)
Q Consensus 236 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 312 (982)
|++++..+..|.++++|+.|++++|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 55555555555555555555555555555555566666666666666666666666666666666666666666654
No 365
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.3e-19 Score=184.01 Aligned_cols=153 Identities=27% Similarity=0.356 Sum_probs=123.9
Q ss_pred ceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCC
Q 036229 477 IGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSN 556 (982)
Q Consensus 477 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 556 (982)
+.+++++|.++. +|..+. ++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+++.|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 679999999984 565554 68999999999999888889999999999999999999999999999999999999999
Q ss_pred cccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCcccc
Q 036229 557 KLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISES 636 (982)
Q Consensus 557 ~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 636 (982)
+|+.+|... |.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..
T Consensus 91 ~l~~l~~~~-----------------------f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 91 KITELPKSL-----------------------FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp CCCCCCTTT-----------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccCHhH-----------------------ccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 999887654 334455555666666666666667777777777777777777777777
Q ss_pred ccCCCCCCeeeCCCCcCCC
Q 036229 637 FGDLISLKSLNLSNNNLSR 655 (982)
Q Consensus 637 ~~~l~~L~~L~Ls~N~l~~ 655 (982)
|..+++|+.|+|++|.+..
T Consensus 148 ~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTCTTCCEEECCSSCEEC
T ss_pred HhCCCCCCEEEeCCCCcCC
Confidence 7778888888888887764
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=5.3e-20 Score=196.46 Aligned_cols=171 Identities=25% Similarity=0.334 Sum_probs=113.4
Q ss_pred cccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCccccc
Q 036229 472 NLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTL 551 (982)
Q Consensus 472 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 551 (982)
.+.++..+++++|.+++.. .+..+++|+.|++++|+|+. +| .+..+++|+.|+|++|+|++..+ +.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 5667777788888887544 57778888888888888874 44 67778888888888888876544 7788888888
Q ss_pred ccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccC
Q 036229 552 SLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQG 631 (982)
Q Consensus 552 ~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 631 (982)
+|++|+++.+|.... ++|++|++++ |++++. +.++.+++|++|+|++|++++
T Consensus 91 ~L~~N~l~~l~~~~~--~~L~~L~L~~------------------------N~l~~~--~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 91 SVNRNRLKNLNGIPS--ACLSRLFLDN------------------------NELRDT--DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp ECCSSCCSCCTTCCC--SSCCEEECCS------------------------SCCSBS--GGGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccCCcCcccc--CcccEEEccC------------------------CccCCC--hhhcCcccccEEECCCCcCCC
Confidence 888888877664322 4444444444 444432 235556666666666666654
Q ss_pred CccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCccccc
Q 036229 632 SISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGE 680 (982)
Q Consensus 632 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 680 (982)
. + .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 3 2 466666666666666666654 4556666666666666666644
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.3e-19 Score=203.20 Aligned_cols=175 Identities=24% Similarity=0.228 Sum_probs=93.2
Q ss_pred ccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCcc-CcCcccEEEeeccccccccccccccccchhhhhccC
Q 036229 157 HLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALS-NCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGY 235 (982)
Q Consensus 157 ~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 235 (982)
++++++|.++ .+|..+. +.++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 22 ~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 22 ILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred EEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 3444444444 3444331 2344455555555544444444 555555555555555544444455555555555555
Q ss_pred CCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccc---cccCCCcEEEccCccccc
Q 036229 236 SGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEI---HNLHNLKLLDLSHNKLVG 312 (982)
Q Consensus 236 N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~ 312 (982)
|+|++..+..|.++++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..| ..+++|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 55554444455555555555555555555555666666666666666666665444444 456677777777777765
Q ss_pred cCcccccCCCCC--ceeecCCCcCC
Q 036229 313 AVPATIFNMSTL--TGLGLQSNSLS 335 (982)
Q Consensus 313 ~~p~~~~~l~~L--~~L~L~~N~l~ 335 (982)
..+..+..++.+ +.|+|++|++.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 555555555542 44555555443
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=6.6e-20 Score=185.82 Aligned_cols=155 Identities=26% Similarity=0.330 Sum_probs=91.8
Q ss_pred cccccCCCcccccccccccccCceEEecCCCcccCCCcc-ccccccccceeecccccccccccccccCccCcceEecccc
Q 036229 549 GTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPL-DIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYN 627 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N 627 (982)
+.+++++|.++++|..++. ++++|++++|++++..+. .++.+++|+.|+|++|+|++..|..|+.+++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3455555555555544432 555555666655544443 3566666666666666666666666666667777777777
Q ss_pred cccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCCCCCCCCCCCcccccCcccCCCC
Q 036229 628 RLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPKGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 628 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
+|++..|..|.++++|++|+|++|+|++.+|..+..+++|++|+|++|+++|.+|......-+....+.++...|+.|
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 776666666666777777777777776666666666667777777777776666532211011122334455556554
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=8.6e-19 Score=183.01 Aligned_cols=156 Identities=26% Similarity=0.349 Sum_probs=109.9
Q ss_pred CCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCC
Q 036229 500 LQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSN 579 (982)
Q Consensus 500 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N 579 (982)
.+.++.+++.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|+.+|...
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~-------------- 83 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGV-------------- 83 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhh--------------
Confidence 456888888887 5665553 78888888888888888888888888888888888887776443
Q ss_pred cccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCc
Q 036229 580 FFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPI 659 (982)
Q Consensus 580 ~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 659 (982)
+..+++|+.|||++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+.
T Consensus 84 ---------~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 84 ---------FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp ---------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred ---------cccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 344455555555555555555556666677777777777776 5566667777777777777777765555
Q ss_pred ccccccccceeecCCCcccccCC
Q 036229 660 SLEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 660 ~l~~l~~L~~l~ls~N~l~~~~p 682 (982)
.+..+++|+.|++++|++.|.++
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHhCCCCCCEEEeeCCCccCCcc
Confidence 66677777777777777776655
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=2.8e-21 Score=228.41 Aligned_cols=218 Identities=20% Similarity=0.114 Sum_probs=128.9
Q ss_pred hhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCccc
Q 036229 126 FTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLE 205 (982)
Q Consensus 126 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 205 (982)
+.+++|+.|+|++|+++ .+|+.++++++|++|++++|.....+|.. +..+.+.+.+|..++.+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l------------l~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL------------MRALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH------------HHHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH------------HHhcccccCCHHHHHHHHhcc
Confidence 56777888888888876 67888888888888887666421111111 011223345555666666666
Q ss_pred EEE-eeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCC
Q 036229 206 ILS-LSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKN 284 (982)
Q Consensus 206 ~L~-Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N 284 (982)
.|+ ++.|.+ .+|..+.+++|.++...+. .|+.|++++|++++ +|. ++++++|++|+|++|
T Consensus 413 ~L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 413 AVDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HHCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSS
T ss_pred cCcchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCcc
Confidence 666 454433 2455555555555432221 35666666666664 344 666666666666666
Q ss_pred ccccCCCccccccCCCcEEEccCccccccCcccccCCCCCceeecCCCcCCCCcCccccccCCCccEEEccCCccccccc
Q 036229 285 FLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIP 364 (982)
Q Consensus 285 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 364 (982)
+|+ .+|..|.++++|+.|+|++|+|++ +| .+..+++|+.|+|++|.|++......+..+++|+.|+|++|++++.+|
T Consensus 474 ~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 474 RLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp CCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred ccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 666 456666666666666666666664 44 566666666666666666655322233456667777777777776544
Q ss_pred cc---ccCCCCCCEEEe
Q 036229 365 RF---IFNASKLSVLEL 378 (982)
Q Consensus 365 ~~---~~~l~~L~~L~L 378 (982)
.. +..+++|+.|++
T Consensus 551 ~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 551 IQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTHHHHHCTTCSEEEC
T ss_pred HHHHHHHHCcccCccCC
Confidence 21 233677777754
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=4.8e-20 Score=224.90 Aligned_cols=184 Identities=24% Similarity=0.277 Sum_probs=70.6
Q ss_pred CCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCccccccccccccc
Q 036229 490 IPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLK 569 (982)
Q Consensus 490 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~ 569 (982)
.|..|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|..|.++++|++|+|++|+|+.||..+..++
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~ 293 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCF 293 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGT
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCC
Confidence 3444444444444444444444 33333334444444444444444 344444444445555555555444444444444
Q ss_pred CceEEecCCCcccCCCccccccccccceeecccccccccccccccCccC-cceEecccccccCCccccccCCCCCCeeeC
Q 036229 570 GMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTN-LQYLFLGYNRLQGSISESFGDLISLKSLNL 648 (982)
Q Consensus 570 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 648 (982)
+|++|+|++|.++ .+|..|+++++|+.|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|++
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l 366 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEI 366 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEe
Confidence 5555555555444 33444555555555555555555555554443321 123555666665555542 334444
Q ss_pred CCC--------cCCCCCCcccccccccceeecCCCcccccCC
Q 036229 649 SNN--------NLSRSIPISLEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 649 s~N--------~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 682 (982)
++| .|.+..+..+..+..++...+++|-+.+...
T Consensus 367 ~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~ 408 (727)
T 4b8c_D 367 NTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYA 408 (727)
T ss_dssp -----------------------------------CCCGGGC
T ss_pred ecccccccccCCccccccchhhcccccceeeeeccccccccC
Confidence 444 3444444445556666666777777664433
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=3.9e-19 Score=189.71 Aligned_cols=165 Identities=20% Similarity=0.271 Sum_probs=115.5
Q ss_pred EEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCc
Q 036229 454 YFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNK 533 (982)
Q Consensus 454 ~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 533 (982)
.+++++|.+++.. .+..+++|+.|++++|+++. +| .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|+
T Consensus 23 ~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~ 96 (263)
T 1xeu_A 23 KQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR 96 (263)
T ss_dssp HHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc
Confidence 3444444444332 46677788888888888874 34 67778888888888888886544 7888888888888888
Q ss_pred CCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccc
Q 036229 534 LSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVI 613 (982)
Q Consensus 534 l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~ 613 (982)
|++. |. +.. ++|++|+|++|+++.+| .+..+++|++|++++|++++. + .++.+++|+.|++++|++++. ..+
T Consensus 97 l~~l-~~-~~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l 168 (263)
T 1xeu_A 97 LKNL-NG-IPS-ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGL 168 (263)
T ss_dssp CSCC-TT-CCC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTS
T ss_pred cCCc-Cc-ccc-CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHh
Confidence 8754 33 222 78888888888888775 366677777777777777654 2 466677777777777777665 556
Q ss_pred cCccCcceEecccccccCC
Q 036229 614 GGLTNLQYLFLGYNRLQGS 632 (982)
Q Consensus 614 ~~l~~L~~L~Ls~N~l~~~ 632 (982)
..+++|++|++++|++++.
T Consensus 169 ~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 169 TRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTCCCCCEEEEEEEEEECC
T ss_pred ccCCCCCEEeCCCCcccCC
Confidence 6777777777777777654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=1.2e-18 Score=177.45 Aligned_cols=156 Identities=21% Similarity=0.267 Sum_probs=106.0
Q ss_pred cccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCce
Q 036229 493 TLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGML 572 (982)
Q Consensus 493 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~ 572 (982)
....+++|+.|++++|.|+ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|+++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~------------- 101 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVT------------- 101 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCB-------------
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccC-------------
Confidence 3456677777777777777 344 46667777777777775542 224555555555555555544
Q ss_pred EEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc-ccCCccccccCCCCCCeeeCCCC
Q 036229 573 YLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR-LQGSISESFGDLISLKSLNLSNN 651 (982)
Q Consensus 573 ~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N 651 (982)
+..+..++.+++|+.|++++|++++..|..++.+++|++|+|++|+ ++ .+| .+.++++|+.|++++|
T Consensus 102 ----------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 102 ----------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFD 169 (197)
T ss_dssp ----------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTB
T ss_pred ----------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCC
Confidence 4445556666777777777777777777778888888888888887 54 455 6888888888888888
Q ss_pred cCCCCCCcccccccccceeecCCCcccc
Q 036229 652 NLSRSIPISLEKLSYLEDLDLSFNKLKG 679 (982)
Q Consensus 652 ~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 679 (982)
++++ ++ .+..+++|++|++++|++.+
T Consensus 170 ~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 170 GVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 8875 44 67788888888888888753
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=9.1e-19 Score=186.27 Aligned_cols=138 Identities=20% Similarity=0.253 Sum_probs=107.7
Q ss_pred CCCccceeeeeceEEEEEEEe-CCCeE--EEEEEeecccch------------------------hhhhHHHHHHHhhhc
Q 036229 781 RFSENNLIGRGGFGSVYKARI-GEGME--VAVKVFDLQCGR------------------------AFKSFDVECEMMKSI 833 (982)
Q Consensus 781 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l 833 (982)
-|++.+.||+|+||.||+|+. .+|+. ||||+++..... ....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 367889999999999999987 67888 999997543111 113678899999999
Q ss_pred CCccc--eeEEeeecCCCeeEEEEEeccC-C----ChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCC
Q 036229 834 RHRNL--IKVISSCSTEEFKALILEYMPH-G----SLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDL 906 (982)
Q Consensus 834 ~h~nI--v~l~~~~~~~~~~~lv~E~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDl 906 (982)
+|+++ +.++++ +..++||||+.+ | +|.+.... .++..+..++.|++.|+.|||. +.||+||||
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88754 445543 356899999942 3 67665432 2234567899999999999994 689999999
Q ss_pred CCCCEEEcCCCcEEEEeecCceee
Q 036229 907 KPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 907 kp~NILl~~~~~~kL~DFGla~~~ 930 (982)
||+|||+++ .+||+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999988 9999999999865
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.5e-18 Score=173.96 Aligned_cols=153 Identities=15% Similarity=0.159 Sum_probs=83.0
Q ss_pred CcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhh
Q 036229 151 NKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKE 230 (982)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 230 (982)
.+++|++|++++|.++ .+| .+ ..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..++.+++|++
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l-~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GI-EYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TG-GGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hcCCccEEeccCCCcc-ChH-HH-hcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 3444444444444444 333 22 44555555555555332 2234555555666666666555555555555555555
Q ss_pred hhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccc
Q 036229 231 LYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKL 310 (982)
Q Consensus 231 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 310 (982)
|+|++|++++..|..++.+++|+.|++++|+..+.+| .+..+++|++|++++|++++. + .+..+++|++|++++|+|
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 5555555555555555556666666666665222333 466667777777777777643 2 566667777777777766
Q ss_pred c
Q 036229 311 V 311 (982)
Q Consensus 311 ~ 311 (982)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=4.2e-18 Score=188.47 Aligned_cols=59 Identities=8% Similarity=-0.116 Sum_probs=30.4
Q ss_pred ccccccccc-eEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEE
Q 036229 469 EIGNLTNLI-GIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELG 528 (982)
Q Consensus 469 ~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 528 (982)
.|.++++|+ .+++.+ +++.+.+.+|.++++|+.+++++|+++.+.+.+|.++++|+.++
T Consensus 268 aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 268 VFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred HhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 344444444 444444 44444445555555555555555555544455555555555554
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=8.3e-18 Score=170.29 Aligned_cols=175 Identities=22% Similarity=0.278 Sum_probs=118.1
Q ss_pred cEEEccCCcCCcCCCccccCCCcccccccCCCcccccccc--cccccCceEEecCCCcccCCCccccccccccceeeccc
Q 036229 525 YELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLT--IWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFST 602 (982)
Q Consensus 525 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~ 602 (982)
+.+++++|+++ .+|..+.. +|++|+|++|+++.+|.. +..+++|++|+|++|++++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 34444444443 33333221 455555555555555432 44566666666777777766777788888888899999
Q ss_pred ccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCC
Q 036229 603 NNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 603 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 682 (982)
|+|++..|..|+++++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+... -...++...+..+...+.-|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCC
Confidence 99988888889999999999999999999889999999999999999999998765321 11224445566666666666
Q ss_pred CCCCCCCCCCcccccCcccCCCC
Q 036229 683 KGGSFGNFSAKSFEGNELLCGSP 705 (982)
Q Consensus 683 ~~~~~~~~~~~~~~gn~~lc~~~ 705 (982)
... ....-.....+...|..+
T Consensus 167 ~~l--~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 167 SKV--RDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp TTT--TTSBGGGSCTTTCCCCCC
T ss_pred hHH--cCCChhhCcHhhcCcCCC
Confidence 542 233334455566667654
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.1e-18 Score=190.90 Aligned_cols=282 Identities=16% Similarity=0.137 Sum_probs=162.2
Q ss_pred CCCCCEEEcCCCCccccCcchhhh-ccCCcEEEccCCccc--CccCccccCcCCCCccccccCcccccCchhhhcC----
Q 036229 104 LSSLQSLNLGFNRLSGSIPSAIFT-LYTLKYVNFRGNQLS--GAFPSFIFNKSSLQHLDFSYNALSGEIPANICSN---- 176 (982)
Q Consensus 104 l~~L~~L~L~~n~~~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~---- 176 (982)
+.+++.|+++++ +.+.--..+.. +++|+.|||++|+++ ...+ +.++.+..+++..| .||+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~---~~~~~~~~~~~~~~----~I~~~aF~~~~~~ 95 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKA---GTYPNGKFYIYMAN----FVPAYAFSNVVNG 95 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESS---SSSGGGCCEEECTT----EECTTTTEEEETT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcc---cccccccccccccc----ccCHHHhcccccc
Confidence 667888888764 22111123344 788999999999987 2222 12233455555555 567777788
Q ss_pred ----CCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCC----CCCCchhhhcCC
Q 036229 177 ----LPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYS----GLQGEIPREFGN 248 (982)
Q Consensus 177 ----l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N----~l~~~~~~~~~~ 248 (982)
+++|+.|+|.+ .++.+.+.+|.++++|+.|++++|.++...+.+|..+.++..+.++.+ ........+|.+
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~ 174 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIE 174 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccc
Confidence 89999999988 888777788888999999999988887677778888777777766552 223333445656
Q ss_pred Ccccc-eEeccccccCCcCChhhh----ccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCC
Q 036229 249 LAELE-LMALQVSNLQGEIPQELA----NLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMST 323 (982)
Q Consensus 249 l~~L~-~L~L~~n~l~~~~p~~l~----~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 323 (982)
+..|+ .+.+.... .++..+. ...+++.+.+.++-...........+++|+.|+|++|+++.+.+.+|.++.+
T Consensus 175 ~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~ 251 (329)
T 3sb4_A 175 GEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKY 251 (329)
T ss_dssp SCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTT
T ss_pred ccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCC
Confidence 66665 34443221 2222211 2445555555544222111111123567777777777776555556666666
Q ss_pred CceeecCCCcCCCCcCccccccCCCcc-EEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCcccee
Q 036229 324 LTGLGLQSNSLSGSLSSIADVQLPNLE-ELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLM 400 (982)
Q Consensus 324 L~~L~L~~N~l~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 400 (982)
|+.++|++| +. .++..+|..+++|+ .+++.+ +++.+.+.+|.++++|+.++++.|+++.+.+.+|.++++|+.+
T Consensus 252 L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 252 LLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred CCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhh
Confidence 655555554 22 23333444444445 555544 4444444555555555555555555555555555555555443
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.71 E-value=5.1e-18 Score=171.84 Aligned_cols=131 Identities=29% Similarity=0.362 Sum_probs=102.5
Q ss_pred cccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc
Q 036229 549 GTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR 628 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 628 (982)
+.+++++|.++++|..+. +++++|++++|+++ .+|..+.++++|+.|||++|+|+++.+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 345666666666665543 35666777777766 455677777788888888888888777888888899999999999
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCC
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 682 (982)
|++..|.+|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+.++
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 988888889999999999999999987666678888999999999999987664
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.68 E-value=7.9e-17 Score=160.90 Aligned_cols=134 Identities=26% Similarity=0.276 Sum_probs=111.0
Q ss_pred ccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccc
Q 036229 548 LGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYN 627 (982)
Q Consensus 548 L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N 627 (982)
.+.+++++|.++.+|..+. +++++|++++|++++..+..++.+++|+.|++++|++++..+..|+.+++|++|+|++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 3556677777777775543 57778888888888776777788888999999999998877778899999999999999
Q ss_pred cccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccCCC
Q 036229 628 RLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIPK 683 (982)
Q Consensus 628 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~ 683 (982)
+|++.++..|.++++|++|+|++|++++..+..+..+++|++|++++|++.|.+|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99988888889999999999999999876666678899999999999999988774
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.2e-16 Score=158.17 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=27.9
Q ss_pred CCCCeEEeeccCCC-CCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCccc
Q 036229 498 QKLQGLHLEDNKLE-GPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLT 559 (982)
Q Consensus 498 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 559 (982)
++|+.|++++|+++ +.+|..+..+++|+.|++++|+|++. ..|..+++|++|+|++|+++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~ 84 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIF 84 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCc
Confidence 44555555555554 34444444455555555555554433 33444444444444444443
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.5e-16 Score=155.78 Aligned_cols=107 Identities=26% Similarity=0.285 Sum_probs=74.5
Q ss_pred cccceEEecCCCCC-CCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccc
Q 036229 474 TNLIGIYLGGNKLN-GSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLS 552 (982)
Q Consensus 474 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 552 (982)
++|+.|++++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56677777777788888888887755 6677778888888888888766777777777777777
Q ss_pred cCCCcccccc--cccccccCceEEecCCCccc
Q 036229 553 LGSNKLTSIP--LTIWNLKGMLYLNFSSNFFT 582 (982)
Q Consensus 553 L~~N~l~~ip--~~~~~l~~L~~L~Ls~N~l~ 582 (982)
|++|+++.+| ..+..+++|++|++++|.++
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~ 133 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVT 133 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGG
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCc
Confidence 7777777765 33444444444444444444
No 383
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=4.9e-17 Score=178.80 Aligned_cols=137 Identities=15% Similarity=0.179 Sum_probs=100.9
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccc--------------hhhh--------hHHHHHHHhhhcCCcc
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCG--------------RAFK--------SFDVECEMMKSIRHRN 837 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~h~n 837 (982)
.-|++.+.||+|++|.||+|...+|+.||||+++.... .... ...+|...+.++.+.+
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34899999999999999999988899999999753210 0001 1234566666664443
Q ss_pred c--eeEEeeecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcC
Q 036229 838 L--IKVISSCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDD 915 (982)
Q Consensus 838 I--v~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~ 915 (982)
+ ...+++. ..++||||++|+++.++... .....++.|++.++.|+| +.|||||||||.|||+++
T Consensus 175 v~vp~p~~~~----~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 175 FPVPEPIAQS----RHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIRE 240 (397)
T ss_dssp CSCCCEEEEE----TTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEE
T ss_pred CCCCeeeecc----CceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeC
Confidence 3 2223221 23799999999888654321 134568899999999999 999999999999999987
Q ss_pred CC----------cEEEEeecCceee
Q 036229 916 NM----------VAHLSDFGIAKLL 930 (982)
Q Consensus 916 ~~----------~~kL~DFGla~~~ 930 (982)
++ .+.|+||+-+...
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCCcccccccccceEEEEeCCcccC
Confidence 76 3899999988764
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=5.2e-16 Score=156.97 Aligned_cols=129 Identities=23% Similarity=0.305 Sum_probs=101.2
Q ss_pred cEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeeccccc
Q 036229 525 YELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNN 604 (982)
Q Consensus 525 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~ 604 (982)
+.+++++|+|+ .+|..+. ++|++|+|++|+++.+|..+..+++|++|+|++|++++..+..|.++++|+.|||++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 34555666655 3343332 45666666666666666666667777777777777777777788888999999999999
Q ss_pred ccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCC
Q 036229 605 FSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRS 656 (982)
Q Consensus 605 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 656 (982)
|+++.|..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+...
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 9998888999999999999999999987777899999999999999999753
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.64 E-value=1e-15 Score=172.94 Aligned_cols=217 Identities=12% Similarity=0.096 Sum_probs=117.6
Q ss_pred ccEEeccCCccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccC
Q 036229 452 LEYFDMSYCNVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSG 531 (982)
Q Consensus 452 L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 531 (982)
|+.+++.. .+..+.+..|.++++|+.+++++|+++.+...+|. ..+|+.+.|.+| ++.+...+|.++++|+.+++..
T Consensus 159 L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~ 235 (401)
T 4fdw_A 159 VQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPE 235 (401)
T ss_dssp CCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCT
T ss_pred ceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCC
Confidence 33444432 34444455566666666666666666655555555 356666666533 5545555666666666666665
Q ss_pred CcCCcCCCccccCCCcccccccCCCccccccccc-ccccCceEEecCCCccc-----CCCccccccccccceeecccccc
Q 036229 532 NKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTI-WNLKGMLYLNFSSNFFT-----GPLPLDIGNLKVLIGIDFSTNNF 605 (982)
Q Consensus 532 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~-~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~Ldls~N~l 605 (982)
| ++.+...+|.+ .+|+.+.+ .|.++.|+... .++.+|+.+++.+|.+. ...+..|.++++|+.+++. |.+
T Consensus 236 ~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i 311 (401)
T 4fdw_A 236 N-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESI 311 (401)
T ss_dssp T-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTC
T ss_pred C-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cce
Confidence 4 44455556655 56666666 34455555433 34566666666555543 2333455555555555555 335
Q ss_pred cccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCccccccc-ccceeecCCCcc
Q 036229 606 SDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLS-YLEDLDLSFNKL 677 (982)
Q Consensus 606 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~l~ls~N~l 677 (982)
+.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|..++ .++.|++..|.+
T Consensus 312 ~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 312 RILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp CEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 4444455555556666665433 444444555555 566666665555544444454442 445555544443
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.4e-16 Score=152.50 Aligned_cols=81 Identities=26% Similarity=0.228 Sum_probs=37.2
Q ss_pred cccceeecccccccccccccccCccCcceEecccccccCC-ccccccCCCCCCeeeCCCCcCCCCCC---cccccccccc
Q 036229 593 KVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGS-ISESFGDLISLKSLNLSNNNLSRSIP---ISLEKLSYLE 668 (982)
Q Consensus 593 ~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~l~~l~~L~ 668 (982)
++|+.||+++|.+++.+|..++.+++|++|++++|++++. .+..++.+++|++|++++|++++..+ ..+..+++|+
T Consensus 64 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~ 143 (149)
T 2je0_A 64 NKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLT 143 (149)
T ss_dssp TTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCC
T ss_pred CCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcc
Confidence 3333334444444333444444444455555555554432 22445555555555555555554333 2445555555
Q ss_pred eeecC
Q 036229 669 DLDLS 673 (982)
Q Consensus 669 ~l~ls 673 (982)
+||++
T Consensus 144 ~L~l~ 148 (149)
T 2je0_A 144 YLDGY 148 (149)
T ss_dssp EETTB
T ss_pred cccCC
Confidence 55544
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=7.8e-16 Score=153.63 Aligned_cols=135 Identities=21% Similarity=0.275 Sum_probs=105.7
Q ss_pred CceeeEEecCCCCcEEEEEeCCCCccccCCccccCCCCCCEEEcCCCCccccCcchhhhccCCcEEEccCCcccCccCcc
Q 036229 69 CNWTGVTCDVHSHRVKVLNISHLNLTGTIPSQLWNLSSLQSLNLGFNRLSGSIPSAIFTLYTLKYVNFRGNQLSGAFPSF 148 (982)
Q Consensus 69 c~w~gv~c~~~~~~v~~L~l~~~~l~g~~~~~l~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 148 (982)
|.|.++.|+ +++++ .+|..+. ++|+.|++++|++++..+..+..+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~------------~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCN------------SKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECC------------SSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEec------------CCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 678888776 33444 4554443 68899999999998666666788999999999999998666666
Q ss_pred ccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccc
Q 036229 149 IFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIP 219 (982)
Q Consensus 149 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 219 (982)
+..+++|++|++++|.++ .+|...|..+++|++|+|++|++++..+..|..+++|++|+|++|.+.+..|
T Consensus 72 ~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp TTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCCccCEEECCCCCcc-ccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 788889999999999888 5666666888888888888888887666667888888888888888876543
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5.5e-16 Score=149.92 Aligned_cols=107 Identities=21% Similarity=0.299 Sum_probs=64.3
Q ss_pred cccceEEecCCCCC-CCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccc
Q 036229 474 TNLIGIYLGGNKLN-GSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLS 552 (982)
Q Consensus 474 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 552 (982)
++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|+|++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 55566666666666666666666654 5566666666666666666655666666666666666
Q ss_pred cCCCcccccc--cccccccCceEEecCCCccc
Q 036229 553 LGSNKLTSIP--LTIWNLKGMLYLNFSSNFFT 582 (982)
Q Consensus 553 L~~N~l~~ip--~~~~~l~~L~~L~Ls~N~l~ 582 (982)
+++|+++.+| ..+..+++|++|++++|.++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 6666666544 33444444444444444444
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.59 E-value=1.7e-14 Score=163.64 Aligned_cols=158 Identities=15% Similarity=0.064 Sum_probs=79.7
Q ss_pred cCchhhhcCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcC
Q 036229 168 EIPANICSNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFG 247 (982)
Q Consensus 168 ~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 247 (982)
.|+...|.++.+|+++.+..+ ++.+...+|.++++|+.+++..+ ++......|.++++|+.+.+..+ ++.....+|.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~ 137 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFK 137 (394)
T ss_dssp EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeee
Confidence 455555555555555555432 44444455666666666665533 33233345555555655555432 3323344455
Q ss_pred CCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCCCcee
Q 036229 248 NLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMSTLTGL 327 (982)
Q Consensus 248 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 327 (982)
+...++........ .....+|.++++|+.+.+.++. +.+....|.++.+|+.+++..| ++......+.++..|+.+
T Consensus 138 ~~~~~~~~~~~~~~--~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 138 GCDFKEITIPEGVT--VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENM 213 (394)
T ss_dssp TCCCSEEECCTTCC--EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBC
T ss_pred cccccccccCcccc--ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhcccccccee
Confidence 44433322222221 1223456666777777765543 3355556666666776666655 333444455555555555
Q ss_pred ecCCC
Q 036229 328 GLQSN 332 (982)
Q Consensus 328 ~L~~N 332 (982)
.+..+
T Consensus 214 ~~~~~ 218 (394)
T 4fs7_A 214 EFPNS 218 (394)
T ss_dssp CCCTT
T ss_pred ecCCC
Confidence 44443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.59 E-value=2.3e-14 Score=161.76 Aligned_cols=256 Identities=14% Similarity=0.131 Sum_probs=144.2
Q ss_pred hhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCC
Q 036229 243 PREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMS 322 (982)
Q Consensus 243 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 322 (982)
..+|.+. +|+.+.+..+ ++.....+|.+ .+|+.+.+.+ .++.+.+.+|.++++|+.+++++|+++......|. ..
T Consensus 129 ~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~ 203 (401)
T 4fdw_A 129 KDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YA 203 (401)
T ss_dssp TTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TC
T ss_pred HhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ec
Confidence 3444442 4555554433 33333344444 2455555553 44444555555556666666655555533333332 34
Q ss_pred CCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCccceecc
Q 036229 323 TLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLMTL 402 (982)
Q Consensus 323 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 402 (982)
+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+
T Consensus 204 ~L~~l~lp~~--------------------------l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l 255 (401)
T 4fdw_A 204 GIEEVLLPVT--------------------------LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL 255 (401)
T ss_dssp CCSEEECCTT--------------------------CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE
T ss_pred ccCEEEeCCc--------------------------hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe
Confidence 4433333322 33333344444444555554442 34444444444 44555555
Q ss_pred cccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEEec
Q 036229 403 HYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIYLG 482 (982)
Q Consensus 403 ~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~L~ 482 (982)
.+.++.++. .+|.+|++|+.+++.+|.+.. +.+..+.+..|.++++|+.+.+.
T Consensus 256 -p~~i~~I~~-----~aF~~c~~L~~l~l~~~~~~~---------------------~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 256 -PNGVTNIAS-----RAFYYCPELAEVTTYGSTFND---------------------DPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp -ETTCCEECT-----TTTTTCTTCCEEEEESSCCCC---------------------CTTCEECTTTTTTCTTCCEECCC
T ss_pred -CCCccEECh-----hHhhCCCCCCEEEeCCccccC---------------------CcccEECHHHhhCCccCCeEEeC
Confidence 223333332 236666666677666664321 11222345567777778888877
Q ss_pred CCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCC-cccccccCCCccccc
Q 036229 483 GNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLA-SLGTLSLGSNKLTSI 561 (982)
Q Consensus 483 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~i 561 (982)
+.++.+...+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|.+++ +++.|++..+.+...
T Consensus 309 -~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~y 385 (401)
T 4fdw_A 309 -ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEKY 385 (401)
T ss_dssp -TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHHH
T ss_pred -CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHHHh
Confidence 4477677778888888888888554 665667788888 888888888888777777888874 678888877776643
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=1.1e-16 Score=162.92 Aligned_cols=130 Identities=28% Similarity=0.324 Sum_probs=70.3
Q ss_pred cCCCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchhhhcCCCcccce
Q 036229 175 SNLPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIPREFGNLAELEL 254 (982)
Q Consensus 175 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 254 (982)
..+++|++|+|++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++|++|+|++|++++ +| .+..+++|+.
T Consensus 45 ~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~ 119 (198)
T 1ds9_A 45 STLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRV 119 (198)
T ss_dssp HHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSE
T ss_pred hcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCE
Confidence 455556666666665554 34 5555566666666666655 445555555556666665555553 23 3445555555
Q ss_pred EeccccccCCcCC-hhhhccCCCcEEEccCCccccCCCcc----------ccccCCCcEEEccCcccc
Q 036229 255 MALQVSNLQGEIP-QELANLTGLEVLKLGKNFLTGEIPPE----------IHNLHNLKLLDLSHNKLV 311 (982)
Q Consensus 255 L~L~~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~ 311 (982)
|++++|++++..+ ..+..+++|++|++++|.+++..|.. +..+++|+.|| +|.++
T Consensus 120 L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 120 LYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 5555555543222 34555666666666666665544332 45555555554 44443
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.6e-15 Score=151.19 Aligned_cols=133 Identities=21% Similarity=0.191 Sum_probs=95.1
Q ss_pred ccCCCcccccccCCCcccccccccccc-cCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcc
Q 036229 542 FSNLASLGTLSLGSNKLTSIPLTIWNL-KGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQ 620 (982)
Q Consensus 542 ~~~l~~L~~L~L~~N~l~~ip~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~ 620 (982)
+.++++|++|++++|+++.+|. +..+ ++|++|++++|.+++. ..++.+++|+.|++++|+|++..|..|+.+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3444555555555555555543 2222 2566666666666543 4567777888888888888776666668889999
Q ss_pred eEecccccccCCccc--cccCCCCCCeeeCCCCcCCCCCCcc----cccccccceeecCCCcccc
Q 036229 621 YLFLGYNRLQGSISE--SFGDLISLKSLNLSNNNLSRSIPIS----LEKLSYLEDLDLSFNKLKG 679 (982)
Q Consensus 621 ~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~----l~~l~~L~~l~ls~N~l~~ 679 (982)
+|+|++|+|+ .+|. .+..+++|+.|++++|+++ .+|.. +..+++|+.||+++|....
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 9999999996 4555 7888999999999999997 45664 8889999999999998764
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=1.3e-16 Score=162.38 Aligned_cols=155 Identities=21% Similarity=0.252 Sum_probs=100.9
Q ss_pred hhccCCcEEEccCCcccCccCc------cccCcCCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCcc
Q 036229 126 FTLYTLKYVNFRGNQLSGAFPS------FIFNKSSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSALS 199 (982)
Q Consensus 126 ~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 199 (982)
.....++.++++.+.++|.+|. .+..+++|++|++++|.+++ +| .+ ..+++|+.|+|++|+++ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~-~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SL-SGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CH-HHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cc-ccCCCCCEEECCCCCcc-cccchhh
Confidence 3444555555555555555444 55666666666666666653 55 33 56666666666666666 4555666
Q ss_pred CcCcccEEEeeccccccccccccccccchhhhhccCCCCCCchh-hhcCCCcccceEeccccccCCcCCh----------
Q 036229 200 NCKYLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSGLQGEIP-REFGNLAELELMALQVSNLQGEIPQ---------- 268 (982)
Q Consensus 200 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~---------- 268 (982)
.+++|++|+|++|++++ +| .+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+..|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 66777777777777764 34 56677777777777777775333 4677777888888888877665544
Q ss_pred hhhccCCCcEEEccCCcccc
Q 036229 269 ELANLTGLEVLKLGKNFLTG 288 (982)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~~ 288 (982)
.+..+++|++|| +|.++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 378889999887 677663
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.55 E-value=3.6e-15 Score=148.58 Aligned_cols=110 Identities=23% Similarity=0.228 Sum_probs=74.6
Q ss_pred ccccccccceEEecCCCCCCCCCccccCcC-CCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCc
Q 036229 469 EIGNLTNLIGIYLGGNKLNGSIPITLGKLQ-KLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLAS 547 (982)
Q Consensus 469 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 547 (982)
.+.++++|+.|++++|+++.. |. +..+. +|+.|+|++|+|++. ..|..+++|++|+|++|+|++..|..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 355667778888888887743 44 33333 788888888877754 56777777777777777777655555677777
Q ss_pred ccccccCCCccccccc--ccccccCceEEecCCCccc
Q 036229 548 LGTLSLGSNKLTSIPL--TIWNLKGMLYLNFSSNFFT 582 (982)
Q Consensus 548 L~~L~L~~N~l~~ip~--~~~~l~~L~~L~Ls~N~l~ 582 (982)
|++|+|++|+++.+|. .+..+++|++|++++|.++
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 7777777777777765 4555555555555555554
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=1.3e-13 Score=156.32 Aligned_cols=331 Identities=14% Similarity=0.086 Sum_probs=154.3
Q ss_pred chhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccC
Q 036229 241 EIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFN 320 (982)
Q Consensus 241 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 320 (982)
+...+|.++++|+.+.+.. .++.....+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+..+ +......+|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 3345555666666666542 244333445555555555555433 44344445555555555444433 22122223322
Q ss_pred CCCCceeecCCCcCCCCcCccccccCCCccEEEccCCcccccccccccCCCCCCEEEeccccCccccCCccccCCcccee
Q 036229 321 MSTLTGLGLQSNSLSGSLSSIADVQLPNLEELRLWSNNFSGTIPRFIFNASKLSVLELGRNSFSGFIPNTFGNLRNLRLM 400 (982)
Q Consensus 321 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 400 (982)
+.. +..... +.........|.++++|+.+.+.++ +..+...+|.++.+|+.+
T Consensus 139 ~~~-------------------------~~~~~~--~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i 190 (394)
T 4fs7_A 139 CDF-------------------------KEITIP--EGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSI 190 (394)
T ss_dssp CCC-------------------------SEEECC--TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBC
T ss_pred ccc-------------------------cccccC--ccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEE
Confidence 221 111111 1122233445666677777777644 334556667777777766
Q ss_pred cccccccccCcccccccccCCCCccccEEEccCCCCCCCCCccccccccccccEEeccCCccccCCCcccccccccceEE
Q 036229 401 TLHYNYLTSSNLELSFLSSFSNCKSLTYIGLSNNPLDGILPRMSMGNLSHSLEYFDMSYCNVSGGFPKEIGNLTNLIGIY 480 (982)
Q Consensus 401 ~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~Ldls~n~l~~~~p~~~~~l~~L~~L~ 480 (982)
.+..| ++.+.. .+|.++..|+.+.+.++... +...+....+|+.+.
T Consensus 191 ~l~~~-~~~I~~-----~~F~~~~~L~~i~~~~~~~~----------------------------i~~~~~~~~~l~~i~ 236 (394)
T 4fs7_A 191 KLPRN-LKIIRD-----YCFAECILLENMEFPNSLYY----------------------------LGDFALSKTGVKNII 236 (394)
T ss_dssp CCCTT-CCEECT-----TTTTTCTTCCBCCCCTTCCE----------------------------ECTTTTTTCCCCEEE
T ss_pred EcCCC-ceEeCc-----hhhccccccceeecCCCceE----------------------------eehhhcccCCCceEE
Confidence 66554 333322 24666666666665544210 001111223344444
Q ss_pred ecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCCcccccccCCCcccc
Q 036229 481 LGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTS 560 (982)
Q Consensus 481 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 560 (982)
+..+ ++.+....|.+...|+.+.+..+..+ .....|..+..++.+....+.+ ...+|.++.+|+.+.+.++ ++.
T Consensus 237 ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 237 IPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp ECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCE
T ss_pred ECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cce
Confidence 4322 22233344445555555555444332 3344455555555555444332 1234444455555444332 333
Q ss_pred cccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccccccCCccccccCC
Q 036229 561 IPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDL 640 (982)
Q Consensus 561 ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 640 (982)
|+.. +|.++.+|+.+++..+ ++.+-..+|.++++|+.+++..| ++.+-..+|.++
T Consensus 311 I~~~-----------------------aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 365 (394)
T 4fs7_A 311 IGEE-----------------------AFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGC 365 (394)
T ss_dssp ECTT-----------------------TTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTC
T ss_pred echh-----------------------hhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCC
Confidence 3322 3333444444444322 33333445666666666666554 444445566666
Q ss_pred CCCCeeeCCCCcCCCCCCcccccccccce
Q 036229 641 ISLKSLNLSNNNLSRSIPISLEKLSYLED 669 (982)
Q Consensus 641 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 669 (982)
.+|+.+++..+ ++ .+..+|.++++|+.
T Consensus 366 ~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 366 INLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred CCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 66666666543 22 23445555665554
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2.4e-14 Score=141.58 Aligned_cols=89 Identities=24% Similarity=0.220 Sum_probs=54.3
Q ss_pred ccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecC
Q 036229 594 VLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLS 673 (982)
Q Consensus 594 ~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls 673 (982)
.|+.|+|++|+|+++.|..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 31 ~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 110 (170)
T 3g39_A 31 TTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLL 110 (170)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeC
Confidence 44455555555555555566666666666666666665555556666666666666666665555556666666666666
Q ss_pred CCcccccCC
Q 036229 674 FNKLKGEIP 682 (982)
Q Consensus 674 ~N~l~~~~p 682 (982)
+|++++.++
T Consensus 111 ~N~~~c~c~ 119 (170)
T 3g39_A 111 NNPWDCACS 119 (170)
T ss_dssp SSCBCTTBG
T ss_pred CCCCCCCch
Confidence 666665554
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=3.3e-14 Score=140.54 Aligned_cols=108 Identities=26% Similarity=0.239 Sum_probs=97.1
Q ss_pred ccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEecccc
Q 036229 548 LGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYN 627 (982)
Q Consensus 548 L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N 627 (982)
.+.+++++|.|+++|..+. +++++|+|++|++++..|..|.++++|+.|||++|+|+++.|..|..+++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4678888888888887664 68889999999999888999999999999999999999988888999999999999999
Q ss_pred cccCCccccccCCCCCCeeeCCCCcCCCCC
Q 036229 628 RLQGSISESFGDLISLKSLNLSNNNLSRSI 657 (982)
Q Consensus 628 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 657 (982)
+|++..+..|.++++|+.|+|++|.++...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999888888999999999999999998654
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=5.5e-14 Score=139.42 Aligned_cols=107 Identities=25% Similarity=0.314 Sum_probs=58.3
Q ss_pred cccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc
Q 036229 549 GTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR 628 (982)
Q Consensus 549 ~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 628 (982)
+.+++++|+++++|..+. ++|++|+| ++|+|++.+|..|+++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~L------------------------s~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 68 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWL------------------------NNNQITKLEPGVFDHLVNLQQLYFNSNK 68 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEEC------------------------CSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEe------------------------CCCCccccCHHHhcCCcCCCEEECCCCC
Confidence 456666666666665443 44445554 4555544445555555555555555555
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccC
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEI 681 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 681 (982)
|++.++..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|++.+.+
T Consensus 69 l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 69 LTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 55444444555555555555555555443334555555555555555555443
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=5e-14 Score=139.70 Aligned_cols=112 Identities=24% Similarity=0.241 Sum_probs=85.3
Q ss_pred ccEEEccCCcCCcCCCccccCCCcccccccCCCcccccccccccccCceEEecCCCcccCCCccccccccccceeecccc
Q 036229 524 LYELGLSGNKLSGSIPACFSNLASLGTLSLGSNKLTSIPLTIWNLKGMLYLNFSSNFFTGPLPLDIGNLKVLIGIDFSTN 603 (982)
Q Consensus 524 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~Ldls~N 603 (982)
-+.+++++|+++ .+|..+. ++|++|+|++|+|+.++. ..|+++++|+.|||++|
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~-----------------------~~~~~l~~L~~L~Ls~N 67 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEP-----------------------GVFDHLVNLQQLYFNSN 67 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCT-----------------------TTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCH-----------------------HHhcCCcCCCEEECCCC
Confidence 378999999997 5676664 899999999999997753 23445556666666677
Q ss_pred cccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCCCCCCcccc
Q 036229 604 NFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLSRSIPISLE 662 (982)
Q Consensus 604 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 662 (982)
+|+++.+..|..+++|++|+|++|+|++.++..|..+++|+.|+|++|.+.. .|..+.
T Consensus 68 ~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c-~~~~~~ 125 (174)
T 2r9u_A 68 KLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC-ECRDIM 125 (174)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT-TBGGGH
T ss_pred CCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccc-ccccHH
Confidence 7766666667888888888888888887766678888889999999998875 343333
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=8.1e-15 Score=163.96 Aligned_cols=111 Identities=17% Similarity=0.159 Sum_probs=48.3
Q ss_pred cCCcEEEccCCcccCccCccccCc-----CCCCccccccCcccccCchhhhcCCCCCCeeeecceeeecccCCCc-----
Q 036229 129 YTLKYVNFRGNQLSGAFPSFIFNK-----SSLQHLDFSYNALSGEIPANICSNLPFLESISLSQNMFHGRIPSAL----- 198 (982)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~ip~~~~~~l~~L~~L~Ls~N~l~~~~p~~~----- 198 (982)
+.|++|+|++|.++......+... ++|++|||++|.++......++..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555543222222211 3455555555554432223333334445555555555443322222
Q ss_pred cCcCcccEEEeeccccccc----cccccccccchhhhhccCCCCC
Q 036229 199 SNCKYLEILSLSINNLLGA----IPKEIGNLTKLKELYLGYSGLQ 239 (982)
Q Consensus 199 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 239 (982)
...++|++|+|++|.++.. ++..+..+++|++|+|++|.++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 1234555555555555431 2222334444555555555544
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.35 E-value=3.7e-11 Score=136.15 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=83.2
Q ss_pred cCchhhhcCCC-CCCeeeecceeeecccCCCccCcCcccEEEeeccc---cccccccccccccchhhhhccCCCCCCchh
Q 036229 168 EIPANICSNLP-FLESISLSQNMFHGRIPSALSNCKYLEILSLSINN---LLGAIPKEIGNLTKLKELYLGYSGLQGEIP 243 (982)
Q Consensus 168 ~ip~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 243 (982)
.|+...|.+.. .|+++.+-.+ ++.+...+|.++++|+.+.++.|. ++.....+|..+.+|+.+.+..+ ++....
T Consensus 53 ~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 53 KIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp EECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred EcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 34444444442 3555555433 444455566666666666665553 33333445666666666655433 443444
Q ss_pred hhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccCCCcEEEccCccccccCcccccCCCC
Q 036229 244 REFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLHNLKLLDLSHNKLVGAVPATIFNMST 323 (982)
Q Consensus 244 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 323 (982)
.+|..+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-.. .....+.++..
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~ 206 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFA 206 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTT
T ss_pred hhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccc
Confidence 56666666666666532 23233445666677777766544 34344455543 45666666544322 33445555555
Q ss_pred CceeecCCC
Q 036229 324 LTGLGLQSN 332 (982)
Q Consensus 324 L~~L~L~~N 332 (982)
++......+
T Consensus 207 l~~~~~~~~ 215 (394)
T 4gt6_A 207 LSTITSDSE 215 (394)
T ss_dssp CCEEEECCS
T ss_pred cceeccccc
Confidence 555444443
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.7e-12 Score=144.52 Aligned_cols=103 Identities=20% Similarity=0.181 Sum_probs=59.4
Q ss_pred cccCCC-cccccccccccccCceEEecCC-CcccCCCccccccccccceeecccccccccccccccCccCcceEeccccc
Q 036229 551 LSLGSN-KLTSIPLTIWNLKGMLYLNFSS-NFFTGPLPLDIGNLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNR 628 (982)
Q Consensus 551 L~L~~N-~l~~ip~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 628 (982)
++++++ .|+.||. +..+++|++|+|++ |++++..+..|+++++|+.|||++|+|++++|..|+++++|++|+|++|+
T Consensus 13 v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 13 LRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp EECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 455555 5555555 55555555555553 55555445555556666666666666666555566666666666666666
Q ss_pred ccCCccccccCCCCCCeeeCCCCcCCC
Q 036229 629 LQGSISESFGDLISLKSLNLSNNNLSR 655 (982)
Q Consensus 629 l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 655 (982)
|++.++..|..+. |+.|+|++|.+..
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCccC
Confidence 6655555555444 6666666666553
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.31 E-value=7.2e-14 Score=156.21 Aligned_cols=188 Identities=21% Similarity=0.190 Sum_probs=108.5
Q ss_pred CCCCCEEEcCCCCccccCcchhhhc-----cCCcEEEccCCcccCccCccc-cCcCCCCccccccCcccccCchhhh---
Q 036229 104 LSSLQSLNLGFNRLSGSIPSAIFTL-----YTLKYVNFRGNQLSGAFPSFI-FNKSSLQHLDFSYNALSGEIPANIC--- 174 (982)
Q Consensus 104 l~~L~~L~L~~n~~~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ip~~~~--- 174 (982)
.+.|+.|+|++|.++......+... ++|++|+|++|.++......+ ..+++|++|||++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567788888887765444444433 578888888887764433333 3456788888888877643222221
Q ss_pred -cCCCCCCeeeecceeeecc----cCCCccCcCcccEEEeecccccccc----ccccccccchhhhhccCCCCCCchhhh
Q 036229 175 -SNLPFLESISLSQNMFHGR----IPSALSNCKYLEILSLSINNLLGAI----PKEIGNLTKLKELYLGYSGLQGEIPRE 245 (982)
Q Consensus 175 -~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~~ 245 (982)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|++++.. +..+...++|++|+|++|.|+......
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 3457788888888888643 3444567788899999999887532 344555556666666666665322211
Q ss_pred cCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccCCCccccccC-----CCcEEE--ccCcccc
Q 036229 246 FGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGEIPPEIHNLH-----NLKLLD--LSHNKLV 311 (982)
Q Consensus 246 ~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-----~L~~L~--Ls~N~l~ 311 (982)
++..+...++|++|||++|.|+......+..+. .|+.+. +..|.+.
T Consensus 231 --------------------l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 231 --------------------LARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp --------------------HHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred --------------------HHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 123344456666666666666543333332221 155555 5555554
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.2e-12 Score=145.73 Aligned_cols=108 Identities=22% Similarity=0.175 Sum_probs=97.9
Q ss_pred eEEecCCC-cccCCCccccccccccceeeccc-ccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCC
Q 036229 572 LYLNFSSN-FFTGPLPLDIGNLKVLIGIDFST-NNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLS 649 (982)
Q Consensus 572 ~~L~Ls~N-~l~~~~~~~~~~l~~L~~Ldls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 649 (982)
..++++++ .+++ +|. +..+++|+.|+|++ |+|+++.|..|+++++|++|+|++|+|++.+|..|.++++|+.|||+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35688988 8885 677 99999999999996 99999988999999999999999999999999999999999999999
Q ss_pred CCcCCCCCCcccccccccceeecCCCcccccCC
Q 036229 650 NNNLSRSIPISLEKLSYLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 650 ~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 682 (982)
+|+|++..|..+..++ |+.|+|++|+|.+.++
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 9999987766777776 9999999999998765
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=9.9e-11 Score=132.58 Aligned_cols=109 Identities=11% Similarity=0.200 Sum_probs=57.3
Q ss_pred CcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCC
Q 036229 467 PKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLA 546 (982)
Q Consensus 467 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (982)
...|.++.+|+.+.+.++..+ +...+|.++++|+.+.+. +.++.+...+|.++++|+.+++..+ ++.+...+|.+++
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345555666666666544332 444556666666666664 3444344455666666666666543 4444555666666
Q ss_pred cccccccCCCcccccccccc-cccCceEEecCCC
Q 036229 547 SLGTLSLGSNKLTSIPLTIW-NLKGMLYLNFSSN 579 (982)
Q Consensus 547 ~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~Ls~N 579 (982)
+|+.+.+.++ ++.|+...| ++.+|+.+++.+|
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 6666666433 555544322 3444444444443
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=7.7e-12 Score=133.26 Aligned_cols=147 Identities=16% Similarity=0.092 Sum_probs=116.8
Q ss_pred HHHhcCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEE
Q 036229 776 CRATNRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALI 854 (982)
Q Consensus 776 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv 854 (982)
....+.|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..++++++++...+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 345567888888898999999999854 6889999987533233457899999999984 67888999999888899999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc--------------------------------------
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG-------------------------------------- 896 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-------------------------------------- 896 (982)
|||++|.++.+.... ......++.++++++..||..
T Consensus 89 ~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999999775321 122346889999999999941
Q ss_pred ------------------CCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 897 ------------------YSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 897 ------------------~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
....++|+|++|.||++++++.+.|+||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 015699999999999998766678999998875
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.08 E-value=1.4e-10 Score=123.34 Aligned_cols=139 Identities=14% Similarity=0.071 Sum_probs=103.1
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc--ceeEEeeecCCCeeEEEEEe
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN--LIKVISSCSTEEFKALILEY 857 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~lv~E~ 857 (982)
.+|.+....+.|..+.||++...+|+.+++|+.... ....+..|+++++.+.+.+ +++++++...++..++||||
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~ 96 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGE 96 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEEC
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEe
Confidence 345443333456669999998777888999997643 3367889999999985444 56788888888889999999
Q ss_pred ccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccC----------------------------------------
Q 036229 858 MPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGY---------------------------------------- 897 (982)
Q Consensus 858 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~---------------------------------------- 897 (982)
++|.++. ... .+ ...++.++++.+..+|...
T Consensus 97 i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (264)
T 1nd4_A 97 VPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAP 167 (264)
T ss_dssp CSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCH
T ss_pred cCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccH
Confidence 9998884 211 11 2357788888888888311
Q ss_pred ---------------CCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 898 ---------------SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 898 ---------------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
..+++|+|++|.||++++++.++|+|||.|..-
T Consensus 168 ~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 168 AELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 123999999999999988777789999998753
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.04 E-value=9.1e-09 Score=115.76 Aligned_cols=97 Identities=18% Similarity=0.147 Sum_probs=67.0
Q ss_pred CcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccCCcCCcCCCccccCCC
Q 036229 467 PKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSGNKLSGSIPACFSNLA 546 (982)
Q Consensus 467 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 546 (982)
...|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+.++.++.+...+|.++++|+.++|..+ ++.+...+|.+++
T Consensus 256 ~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 333 (379)
T 4h09_A 256 SFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCK 333 (379)
T ss_dssp TTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred ccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCC
Confidence 445666677777777543 55455667777777888888777777666677777888888888654 5556667788888
Q ss_pred cccccccCCCcccccccccc
Q 036229 547 SLGTLSLGSNKLTSIPLTIW 566 (982)
Q Consensus 547 ~L~~L~L~~N~l~~ip~~~~ 566 (982)
+|+.+.+..+ ++.|....|
T Consensus 334 ~L~~i~ip~~-v~~I~~~aF 352 (379)
T 4h09_A 334 ALSTISYPKS-ITLIESGAF 352 (379)
T ss_dssp TCCCCCCCTT-CCEECTTTT
T ss_pred CCCEEEECCc-cCEEchhHh
Confidence 8888877654 666665444
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=1.3e-10 Score=128.73 Aligned_cols=205 Identities=16% Similarity=0.223 Sum_probs=115.1
Q ss_pred CCcEEEEEeCCCCccc-c-------CCccccCCCCCCEEEcCCCCcc---------ccCcchhhhccCCcEEEccCCccc
Q 036229 80 SHRVKVLNISHLNLTG-T-------IPSQLWNLSSLQSLNLGFNRLS---------GSIPSAIFTLYTLKYVNFRGNQLS 142 (982)
Q Consensus 80 ~~~v~~L~l~~~~l~g-~-------~~~~l~~l~~L~~L~L~~n~~~---------~~~p~~~~~l~~L~~L~Ls~N~l~ 142 (982)
..+|+.|.+......| . +.+++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3578888888666553 2 2344667889999988765331 234555667788888888887311
Q ss_pred CccCccccCcCCCCccccccCcccccCchhhh-cCCCCCCeeeecc--eeeecc-----cCCCc--cCcCcccEEEeecc
Q 036229 143 GAFPSFIFNKSSLQHLDFSYNALSGEIPANIC-SNLPFLESISLSQ--NMFHGR-----IPSAL--SNCKYLEILSLSIN 212 (982)
Q Consensus 143 ~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~-~~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N 212 (982)
.++. + .+++|++|+|..|.++......+. ..+|+|++|+|+. |...+. +...+ ..+++|++|+|++|
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 2333 3 377888888888777543333332 2678888888753 221111 01112 23567777777777
Q ss_pred ccccccccccc---cccchhhhhccCCCCCCchhhhcCCCcccceEeccccccCCcCChhhhccCCCcEEEccCCccccC
Q 036229 213 NLLGAIPKEIG---NLTKLKELYLGYSGLQGEIPREFGNLAELELMALQVSNLQGEIPQELANLTGLEVLKLGKNFLTGE 289 (982)
Q Consensus 213 ~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 289 (982)
.+.+..+..+. .+++|++|+|+.|.+++..+.. ++..+..+++|+.|+|++|.|+..
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~--------------------L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLTDEGARL--------------------LLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHH--------------------HHTTHHHHTTCSEEECCSBBCCHH
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHH--------------------HHhhcccCCcceEEECCCCcCCHH
Confidence 66543332222 3445555555555554322111 122334567777777777776643
Q ss_pred CCccccc-cCCCcEEEccCcc
Q 036229 290 IPPEIHN-LHNLKLLDLSHNK 309 (982)
Q Consensus 290 ~p~~~~~-l~~L~~L~Ls~N~ 309 (982)
.-..+.. + ...+|+++|+
T Consensus 323 ~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHc--CCEEEecCCc
Confidence 2223332 1 3557777776
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.98 E-value=1.5e-08 Score=113.91 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=26.3
Q ss_pred cccccceeecccccccccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCC
Q 036229 591 NLKVLIGIDFSTNNFSDVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSN 650 (982)
Q Consensus 591 ~l~~L~~Ldls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 650 (982)
++.+|+.+++.++.++.+.+.+|.++.+|+.+.|..+ ++.+-..+|.++.+|+.+.+..
T Consensus 284 ~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 284 GCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp TCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 3333334444433343333344555555555555432 3333344555555555555543
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.93 E-value=2.6e-10 Score=126.15 Aligned_cols=208 Identities=14% Similarity=0.233 Sum_probs=116.3
Q ss_pred CCCCEEEcCCCCccc-c-------CcchhhhccCCcEEEccCCcccCccCccccCcCCCCccccccCcccccCchhhhcC
Q 036229 105 SSLQSLNLGFNRLSG-S-------IPSAIFTLYTLKYVNFRGNQLSGAFPSFIFNKSSLQHLDFSYNALSGEIPANICSN 176 (982)
Q Consensus 105 ~~L~~L~L~~n~~~~-~-------~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 176 (982)
..++.|.+....+.| . +..++..+++|+.|.+..+.... .+++...- +.++. ++..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~--------------~~is~~~~-~~L~~-ll~~ 170 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEE--------------QEISWIEQ-VDLSP-VLDA 170 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTT--------------CCGGGCBC-CBCHH-HHHT
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhh--------------cccccccc-cCHHH-HHhc
Confidence 356777777655542 1 23445678888888887653310 00111100 11222 2244
Q ss_pred CCCCCeeeecceeeecccCCCccCcCcccEEEeeccccccccccccc--cccchhhhhccC--CCCCCc-----hhhhc-
Q 036229 177 LPFLESISLSQNMFHGRIPSALSNCKYLEILSLSINNLLGAIPKEIG--NLTKLKELYLGY--SGLQGE-----IPREF- 246 (982)
Q Consensus 177 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~-----~~~~~- 246 (982)
+|+|++|+|++|.-. .++. +. +++|++|+|..+.++......+. .+++|++|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~ 247 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFS 247 (362)
T ss_dssp CTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSC
T ss_pred CCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHh
Confidence 555555555554211 1222 22 45566666665555433222332 455566665532 111110 11112
Q ss_pred -CCCcccceEeccccccCCcCChhhh---ccCCCcEEEccCCccccC----CCccccccCCCcEEEccCccccccCcccc
Q 036229 247 -GNLAELELMALQVSNLQGEIPQELA---NLTGLEVLKLGKNFLTGE----IPPEIHNLHNLKLLDLSHNKLVGAVPATI 318 (982)
Q Consensus 247 -~~l~~L~~L~L~~n~l~~~~p~~l~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 318 (982)
..+++|+.|+|.+|.+.+..+..+. .+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+
T Consensus 248 ~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 248 KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 2468899999988888755544444 478999999999999864 23344567999999999999875444334
Q ss_pred cC-CCCCceeecCCCc
Q 036229 319 FN-MSTLTGLGLQSNS 333 (982)
Q Consensus 319 ~~-l~~L~~L~L~~N~ 333 (982)
.. + ...++++.++
T Consensus 328 ~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHC--CSEEECCSBC
T ss_pred HHHc--CCEEEecCCc
Confidence 33 2 3568888887
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=1.8e-09 Score=120.44 Aligned_cols=143 Identities=13% Similarity=0.140 Sum_probs=107.2
Q ss_pred CccceeeeeceEEEEEEEeCCCeEEEEEEee--ccc-chhhhhHHHHHHHhhhcC--CccceeEEeeecCC---CeeEEE
Q 036229 783 SENNLIGRGGFGSVYKARIGEGMEVAVKVFD--LQC-GRAFKSFDVECEMMKSIR--HRNLIKVISSCSTE---EFKALI 854 (982)
Q Consensus 783 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~lv 854 (982)
...+.++.|.++.||++...+ ..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..|+|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 346788999999999998754 578888775 322 123457889999999996 45688899988776 458999
Q ss_pred EEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccC-------------------------------------
Q 036229 855 LEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGY------------------------------------- 897 (982)
Q Consensus 855 ~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~------------------------------------- 897 (982)
|||++|..+.+.. ...++..++..++.+++++|..||...
T Consensus 120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999998774321 123567788889999999999999420
Q ss_pred ------------------CCCeEEcCCCCCCEEEcCCCc--EEEEeecCcee
Q 036229 898 ------------------SAPVIHCDLKPSNVLLDDNMV--AHLSDFGIAKL 929 (982)
Q Consensus 898 ------------------~~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~ 929 (982)
..+++|+|++|.||++++++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999987653 69999999875
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=1.3e-11 Score=129.31 Aligned_cols=23 Identities=13% Similarity=0.055 Sum_probs=16.9
Q ss_pred CCceeeEEecCCCCcEEEEEeCC
Q 036229 68 VCNWTGVTCDVHSHRVKVLNISH 90 (982)
Q Consensus 68 ~c~w~gv~c~~~~~~v~~L~l~~ 90 (982)
-|+|.|+.|+.+..+|..+...+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHhcCcEEECCCCCEEEEEEecC
Confidence 47899999996666776665544
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=2.8e-07 Score=100.76 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=102.6
Q ss_pred CCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCC----ccceeEEeeecCCCeeEEEEE
Q 036229 781 RFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRH----RNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 781 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~lv~E 856 (982)
.+...+.++.|....||++ ++.+++|+.... .....+.+|.++++.+.+ ..+++++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5667788999999999998 566888876432 224568899999988865 235566655 46689999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccC---------------------------------------
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGY--------------------------------------- 897 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~--------------------------------------- 897 (982)
|++|.++.+.... .++..++..++.+++..+..||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643321 2456667778888888888888311
Q ss_pred ---------------------CCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 898 ---------------------SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 898 ---------------------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
...++|+|++|.||++++++.+.|+||+.+..-
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234699999999999998767899999998753
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.48 E-value=1.3e-08 Score=101.48 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=66.1
Q ss_pred cCCccccCCCCCCEEEcCCC-Ccccc----CcchhhhccCCcEEEccCCcccCc----cCccccCcCCCCccccccCccc
Q 036229 96 TIPSQLWNLSSLQSLNLGFN-RLSGS----IPSAIFTLYTLKYVNFRGNQLSGA----FPSFIFNKSSLQHLDFSYNALS 166 (982)
Q Consensus 96 ~~~~~l~~l~~L~~L~L~~n-~~~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 166 (982)
.+...+...+.|++|+|++| .+... +...+...++|++|+|++|+++.. +...+...++|++|+|++|.|.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 34455666777888888887 77532 333445567777788877777532 3333445566777777777665
Q ss_pred cc----CchhhhcCCCCCCeeee--cceeeeccc----CCCccCcCcccEEEeeccccc
Q 036229 167 GE----IPANICSNLPFLESISL--SQNMFHGRI----PSALSNCKYLEILSLSINNLL 215 (982)
Q Consensus 167 ~~----ip~~~~~~l~~L~~L~L--s~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~ 215 (982)
.. +...+ ...+.|++|+| ++|.|.... ...+...+.|++|+|++|.+.
T Consensus 107 ~~g~~~l~~~L-~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 107 GSGILALVEAL-QSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHGG-GGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHH-HhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 32 12222 34445555555 555554322 222333345555555555553
No 416
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.46 E-value=3.3e-07 Score=99.46 Aligned_cols=137 Identities=21% Similarity=0.225 Sum_probs=101.0
Q ss_pred cceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhc-CCcc--ceeEEeeecCCC---eeEEEEEec
Q 036229 785 NNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSI-RHRN--LIKVISSCSTEE---FKALILEYM 858 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~n--Iv~l~~~~~~~~---~~~lv~E~~ 858 (982)
.+.++.|....||++. ..+++|+.... .....+.+|+++++.+ .+.. +++++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999864 45888886532 3456788999999887 3332 456666554433 458999999
Q ss_pred cCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc------------------------------------------
Q 036229 859 PHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG------------------------------------------ 896 (982)
Q Consensus 859 ~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~------------------------------------------ 896 (982)
+|.++.+.... .++..++..++.+++..+..||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888654322 256677778888888888888831
Q ss_pred -------------CCCCeEEcCCCCCCEEEcC--CCcEEEEeecCceee
Q 036229 897 -------------YSAPVIHCDLKPSNVLLDD--NMVAHLSDFGIAKLL 930 (982)
Q Consensus 897 -------------~~~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~~ 930 (982)
....++|+|++|.||++++ ...+.++||+.+..-
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1146899999999999997 567899999998753
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=2.9e-08 Score=103.98 Aligned_cols=90 Identities=31% Similarity=0.300 Sum_probs=60.1
Q ss_pred cccccce--eeccccccc---ccccccccCccCcceEecccccccC--CccccccCCCCCCeeeCCCCcCCCCCCccccc
Q 036229 591 NLKVLIG--IDFSTNNFS---DVIPTVIGGLTNLQYLFLGYNRLQG--SISESFGDLISLKSLNLSNNNLSRSIPISLEK 663 (982)
Q Consensus 591 ~l~~L~~--Ldls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 663 (982)
..+.|+. ++++.|+.. ..++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..
T Consensus 139 ~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~ 216 (267)
T 3rw6_A 139 SDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDK 216 (267)
T ss_dssp GCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGG
T ss_pred CCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhh
Confidence 3344444 566666432 2222233457788888888888887 3456777788888888888888764 34555
Q ss_pred cc--ccceeecCCCcccccCC
Q 036229 664 LS--YLEDLDLSFNKLKGEIP 682 (982)
Q Consensus 664 l~--~L~~l~ls~N~l~~~~p 682 (982)
+. +|++|+|++|++++.+|
T Consensus 217 l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 217 IKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp GTTSCCSEEECTTSTTGGGCS
T ss_pred cccCCcceEEccCCcCccccC
Confidence 55 78888888888887666
No 418
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=1.4e-06 Score=93.23 Aligned_cols=77 Identities=13% Similarity=0.107 Sum_probs=62.4
Q ss_pred CccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCc---cceeEEeeecCCCeeEEEEEecc
Q 036229 783 SENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHR---NLIKVISSCSTEEFKALILEYMP 859 (982)
Q Consensus 783 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~lv~E~~~ 859 (982)
...+.++.|.++.||+++..+|+.+++|+...........+..|++.++.+.+. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 446789999999999999888999999997543333446789999999999765 588888764 3689999999
Q ss_pred CCCh
Q 036229 860 HGSL 863 (982)
Q Consensus 860 ~gsL 863 (982)
++++
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9875
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=2.2e-06 Score=92.91 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=95.9
Q ss_pred cceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCc---cceeEEeeec-CCCeeEEEEEeccC
Q 036229 785 NNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHR---NLIKVISSCS-TEEFKALILEYMPH 860 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~lv~E~~~~ 860 (982)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+++++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467888999999988 4668888843 223456789999999999642 3667777763 45678899999999
Q ss_pred CChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHcc--------------------------------------------
Q 036229 861 GSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFG-------------------------------------------- 896 (982)
Q Consensus 861 gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~-------------------------------------------- 896 (982)
.++.+.... .++..+...++.++++.+..||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 888653211 123444455555555555555521
Q ss_pred -------------CCCCeEEcCCCCCCEEEcC---CCc-EEEEeecCcee
Q 036229 897 -------------YSAPVIHCDLKPSNVLLDD---NMV-AHLSDFGIAKL 929 (982)
Q Consensus 897 -------------~~~~ivHrDlkp~NILl~~---~~~-~kL~DFGla~~ 929 (982)
....++|+|++|.||++++ ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2346799999999999987 455 58999998875
No 420
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.33 E-value=8.4e-08 Score=95.61 Aligned_cols=42 Identities=17% Similarity=0.121 Sum_probs=20.4
Q ss_pred hhccCCCcEEEc--cCCccccC----CCccccccCCCcEEEccCcccc
Q 036229 270 LANLTGLEVLKL--GKNFLTGE----IPPEIHNLHNLKLLDLSHNKLV 311 (982)
Q Consensus 270 l~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 311 (982)
+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 117 L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 117 LQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 334445555555 44555432 1223333455666666666553
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.31 E-value=3.1e-06 Score=90.02 Aligned_cols=142 Identities=17% Similarity=0.081 Sum_probs=102.0
Q ss_pred cCCCccceeeeeceE-EEEEEEeC-CCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEEEE
Q 036229 780 NRFSENNLIGRGGFG-SVYKARIG-EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~E 856 (982)
..|+. +.+..|..| .||+.... ++..+++|+-+.. ....+.+|.+.++.+. +--+.++++++.+.+..++|||
T Consensus 25 ~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme 100 (272)
T 4gkh_A 25 YGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTT 100 (272)
T ss_dssp TTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred cCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEE
Confidence 34433 345556555 69998754 4677899986533 3457888999998874 4457889999988899999999
Q ss_pred eccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccC---------------------------------------
Q 036229 857 YMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGY--------------------------------------- 897 (982)
Q Consensus 857 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~--------------------------------------- 897 (982)
+++|.++.+..... ......+..+++..+..||...
T Consensus 101 ~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred eeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 99998887655322 1223446667777777777210
Q ss_pred ----------------CCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 898 ----------------SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 898 ----------------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
...++|+|+.+.||++++++.+-|+||+.+..-
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 114899999999999998877789999998753
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.20 E-value=5.5e-06 Score=91.87 Aligned_cols=77 Identities=10% Similarity=0.103 Sum_probs=58.5
Q ss_pred CCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc--ceeEEeeecCC-CeeEEEEEec
Q 036229 782 FSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN--LIKVISSCSTE-EFKALILEYM 858 (982)
Q Consensus 782 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~lv~E~~ 858 (982)
....+.++.|....+|+... +++.+++|+.... ..+..|+.+++.+.... ++++++++... +..|+||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 44567789999999999986 5788999987532 25888999999886533 56777776654 6789999999
Q ss_pred cCCChH
Q 036229 859 PHGSLE 864 (982)
Q Consensus 859 ~~gsL~ 864 (982)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.18 E-value=2.6e-06 Score=94.61 Aligned_cols=80 Identities=9% Similarity=-0.014 Sum_probs=57.6
Q ss_pred ccee-eeeceEEEEEEEeC-------CCeEEEEEEeeccc---chhhhhHHHHHHHhhhcC-C--ccceeEEeeecCC--
Q 036229 785 NNLI-GRGGFGSVYKARIG-------EGMEVAVKVFDLQC---GRAFKSFDVECEMMKSIR-H--RNLIKVISSCSTE-- 848 (982)
Q Consensus 785 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~nIv~l~~~~~~~-- 848 (982)
.+.| +.|....+|++... +++.+++|+..... ......+.+|+++++.+. + ..+++++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 78889999998754 26788999865432 112357888999998884 2 3577888887655
Q ss_pred -CeeEEEEEeccCCChH
Q 036229 849 -EFKALILEYMPHGSLE 864 (982)
Q Consensus 849 -~~~~lv~E~~~~gsL~ 864 (982)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 4578999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.86 E-value=4e-05 Score=84.35 Aligned_cols=139 Identities=15% Similarity=0.173 Sum_probs=80.7
Q ss_pred ceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCC--ccceeEEee------ecCCCeeEEEEEe
Q 036229 786 NLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRH--RNLIKVISS------CSTEEFKALILEY 857 (982)
Q Consensus 786 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~------~~~~~~~~lv~E~ 857 (982)
+.++.|..+.||++...++ .+++|+.... ..++..|.++++.+.. -.+++++.. ....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4455577889999987554 5899988642 2344456666665531 133444431 1245678899999
Q ss_pred ccCCChH-----H---------HHhc--CCC-----------cCCHHHH-------------------------------
Q 036229 858 MPHGSLE-----K---------SLYS--SNY-----------ILDIFQR------------------------------- 879 (982)
Q Consensus 858 ~~~gsL~-----~---------~l~~--~~~-----------~~~~~~~------------------------------- 879 (982)
++|.++. + .++. ... ...|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 0 1111 000 0122110
Q ss_pred HHHHHHHHHHHHHHHc----------cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 880 LNIMVDVATTLEYLHF----------GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 880 ~~i~~qi~~~L~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..+..++..++++++. ....+++|+|+++.||+++.++.+.++||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223345566641 0267899999999999998788999999998864
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.81 E-value=4.2e-05 Score=86.20 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=50.8
Q ss_pred cceeeeeceEEEEEEEeC-CCeEEEEEEeecccc-------hhhhhHHHHHHHhhhcCC--c-cceeEEeeecCCCeeEE
Q 036229 785 NNLIGRGGFGSVYKARIG-EGMEVAVKVFDLQCG-------RAFKSFDVECEMMKSIRH--R-NLIKVISSCSTEEFKAL 853 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-nIv~l~~~~~~~~~~~l 853 (982)
.+.+|.|..+.||+++.. +++.|++|....... ...+++..|.++++.+.. | .+++++.+. .+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCccEE
Confidence 467899999999999754 467899998653211 223567889999988732 3 455666553 344689
Q ss_pred EEEeccCC
Q 036229 854 ILEYMPHG 861 (982)
Q Consensus 854 v~E~~~~g 861 (982)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 426
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.57 E-value=0.00042 Score=74.02 Aligned_cols=80 Identities=13% Similarity=0.107 Sum_probs=60.4
Q ss_pred cCCCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCC---ccceeEEeeecCCCeeEEEEE
Q 036229 780 NRFSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRH---RNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 780 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~~~~~lv~E 856 (982)
......+.+|.|..+.||+.+..+|+.|++|+...........+..|++.|+.+.- -.+++++++. ..++|||
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CCeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 34556788999999999999999999999998765544445678899999988842 2456666653 2478999
Q ss_pred eccCCCh
Q 036229 857 YMPHGSL 863 (982)
Q Consensus 857 ~~~~gsL 863 (982)
|++++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987653
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.56 E-value=0.00034 Score=75.25 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=92.6
Q ss_pred ccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcC---CccceeEEeeecCCCeeEEEEEeccC
Q 036229 784 ENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR---HRNLIKVISSCSTEEFKALILEYMPH 860 (982)
Q Consensus 784 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~lv~E~~~~ 860 (982)
..+.++.|....+|+... ++..+++|+.... ....+..|.+.++.+. ...++++++++...+..++||||+++
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 456789999999999986 4677888987633 3567888999998883 36788999988888889999999998
Q ss_pred CChHH-----------HHhcCCC---------------------cCCHHHHH---HHHHH----------------HHHH
Q 036229 861 GSLEK-----------SLYSSNY---------------------ILDIFQRL---NIMVD----------------VATT 889 (982)
Q Consensus 861 gsL~~-----------~l~~~~~---------------------~~~~~~~~---~i~~q----------------i~~~ 889 (982)
..+.. .++.... .-+|.... ++..+ ++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76421 1111110 01343221 11111 1111
Q ss_pred H-HHHH-ccCCCCeEEcCCCCCCEEEcCCCcEEEEeec
Q 036229 890 L-EYLH-FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFG 925 (982)
Q Consensus 890 L-~yLH-~~~~~~ivHrDlkp~NILl~~~~~~kL~DFG 925 (982)
+ ..|. ......+||+|+.+.|++++.++ +.|+||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 2232 12257899999999999999887 8999984
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.51 E-value=4.1e-05 Score=74.11 Aligned_cols=34 Identities=12% Similarity=0.143 Sum_probs=15.3
Q ss_pred CCCeeeecceeeecccCCCccCcCcccEEEeecc
Q 036229 179 FLESISLSQNMFHGRIPSALSNCKYLEILSLSIN 212 (982)
Q Consensus 179 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 212 (982)
+|++|||+++.++...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3444455444444333333444444444444444
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=4.6e-05 Score=73.76 Aligned_cols=82 Identities=10% Similarity=0.098 Sum_probs=34.6
Q ss_pred cccEEEeeccccccccccccccccchhhhhccCCC-CCCchhhhcCCC----cccceEeccccc-cCCcCChhhhccCCC
Q 036229 203 YLEILSLSINNLLGAIPKEIGNLTKLKELYLGYSG-LQGEIPREFGNL----AELELMALQVSN-LQGEIPQELANLTGL 276 (982)
Q Consensus 203 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~n~-l~~~~p~~l~~l~~L 276 (982)
+|++|||+++.++...-..+..+++|++|+|++|. ++...-..++.+ ++|+.|+++++. ++...-..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443333334444444444444442 333222233332 234444444442 333222334445555
Q ss_pred cEEEccCC
Q 036229 277 EVLKLGKN 284 (982)
Q Consensus 277 ~~L~Ls~N 284 (982)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.33 E-value=0.00046 Score=78.16 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=46.2
Q ss_pred ccceeeeeceEEEEEEEeCCCeEEEEEEeeccc----ch-----hhhhHHHHHHHhh-hcCCccceeEEeeecCCCeeEE
Q 036229 784 ENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQC----GR-----AFKSFDVECEMMK-SIRHRNLIKVISSCSTEEFKAL 853 (982)
Q Consensus 784 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~-----~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~~l 853 (982)
..+.+|.|..+.||++.. +++.++||...... .. ....++.|+..+. ......+++++.+. ++..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 356789999999999965 46789999432110 00 1223333433322 22345677888776 456789
Q ss_pred EEEec-cC
Q 036229 854 ILEYM-PH 860 (982)
Q Consensus 854 v~E~~-~~ 860 (982)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 431
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.31 E-value=0.00075 Score=73.34 Aligned_cols=158 Identities=15% Similarity=0.158 Sum_probs=90.2
Q ss_pred cCCHHHHHHHhcCCCcc-----ceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc--ceeE
Q 036229 769 RFSYLELCRATNRFSEN-----NLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN--LIKV 841 (982)
Q Consensus 769 ~~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l 841 (982)
.++.+++.....+|... +.|+.|....+|++...++ .+++|+.... ...+.+..|+++++.+.... ++++
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34556666666667542 3456688889999987555 6788988642 12345667888887763222 3444
Q ss_pred Eeee------cCCCeeEEEEEeccCCChHH--------------HHhcC--C--Cc----C---CHHHHHH---------
Q 036229 842 ISSC------STEEFKALILEYMPHGSLEK--------------SLYSS--N--YI----L---DIFQRLN--------- 881 (982)
Q Consensus 842 ~~~~------~~~~~~~lv~E~~~~gsL~~--------------~l~~~--~--~~----~---~~~~~~~--------- 881 (982)
+... ...+..+++|||++|..+.. .++.. . .. . .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 4321 12356789999998865311 01110 0 00 0 1211000
Q ss_pred ---HHHHHHHHHHHHHc----cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 882 ---IMVDVATTLEYLHF----GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 882 ---i~~qi~~~L~yLH~----~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
+...+...+++++. ....+++|+|+.+.||++++++.+.++||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01123444555542 1246899999999999999876668999998874
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.26 E-value=0.001 Score=72.76 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=75.9
Q ss_pred ceeeeeceEE-EEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCC--ccceeEEeeecCCCeeEEEEEeccCCC
Q 036229 786 NLIGRGGFGS-VYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRH--RNLIKVISSCSTEEFKALILEYMPHGS 862 (982)
Q Consensus 786 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~lv~E~~~~gs 862 (982)
+.++.|.... +|+....+++.+++|...... ...+..|+.+++.+.. -.+++++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4565565554 667765446777777654321 1445667887777632 34567777654444 68999997766
Q ss_pred hHHHHhcCC-------------------------CcCCHHHHH-------H-H------------HHHHHHHHHHHH---
Q 036229 863 LEKSLYSSN-------------------------YILDIFQRL-------N-I------------MVDVATTLEYLH--- 894 (982)
Q Consensus 863 L~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~qi~~~L~yLH--- 894 (982)
+.+.+.... ...+..... . + ...+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 654332110 011111000 0 0 011111222221
Q ss_pred ccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCcee
Q 036229 895 FGYSAPVIHCDLKPSNVLLDDN----MVAHLSDFGIAKL 929 (982)
Q Consensus 895 ~~~~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~ 929 (982)
......++|+|+.+.||+++.+ +.+.++||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125689999999999999874 6899999999875
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.14 E-value=0.00084 Score=72.21 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=78.0
Q ss_pred CCccceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCccc-eeEEeeecCCCeeEEEEEec-c
Q 036229 782 FSENNLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNL-IKVISSCSTEEFKALILEYM-P 859 (982)
Q Consensus 782 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~E~~-~ 859 (982)
+.-.+.++.|....+|++ +.+++|+....... .....+|+.+++.+....+ ++++++..+ .-++++||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~--~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA--TGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT--TCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC--CCEEEEeecCC
Confidence 333678999999999999 45888887643222 2334668888877742222 566665433 346899999 6
Q ss_pred CCChHHH------------------HhcCCCc----CCHH-HHHHHHH--------------HHHHHHH----HHH-ccC
Q 036229 860 HGSLEKS------------------LYSSNYI----LDIF-QRLNIMV--------------DVATTLE----YLH-FGY 897 (982)
Q Consensus 860 ~gsL~~~------------------l~~~~~~----~~~~-~~~~i~~--------------qi~~~L~----yLH-~~~ 897 (982)
|.++... ++..... .+.. ....+.. .+...+. .+. ...
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 6544210 0011100 0111 1111100 0111111 111 112
Q ss_pred CCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 898 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 898 ~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
...++|+|+.|.||+ ..++.+.++||..|..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 456899999999999 5667889999998875
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.96 E-value=0.00099 Score=61.40 Aligned_cols=59 Identities=25% Similarity=0.308 Sum_probs=34.2
Q ss_pred eEeccccccc-CCccccccCCCCCCeeeCCCCcCCCCCCcccccccccceeecCCCcccccC
Q 036229 621 YLFLGYNRLQ-GSISESFGDLISLKSLNLSNNNLSRSIPISLEKLSYLEDLDLSFNKLKGEI 681 (982)
Q Consensus 621 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~ 681 (982)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 4555555554 12332221 24667777777776555556666777777777777776543
No 435
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.92 E-value=0.0018 Score=71.51 Aligned_cols=139 Identities=14% Similarity=0.156 Sum_probs=83.7
Q ss_pred ceeeeeceEEEEEEEeC--------CCeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEEEE
Q 036229 786 NLIGRGGFGSVYKARIG--------EGMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALILE 856 (982)
Q Consensus 786 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~E 856 (982)
+.+..|-...+|++... +++.|++|+.... ........+|.++++.+. +.-.+++++++.. .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 56767878889999864 2478999986332 223456678999998873 3334677777654 29999
Q ss_pred eccCCChHHH-----------------HhcC----CCcCC--HHHHHHHHHHHHH-------------------HHHHHH
Q 036229 857 YMPHGSLEKS-----------------LYSS----NYILD--IFQRLNIMVDVAT-------------------TLEYLH 894 (982)
Q Consensus 857 ~~~~gsL~~~-----------------l~~~----~~~~~--~~~~~~i~~qi~~-------------------~L~yLH 894 (982)
|++|.++..- ++.. ..... +.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9988655210 1111 11122 3444445443322 223332
Q ss_pred -----ccCCCCeEEcCCCCCCEEEcCC----CcEEEEeecCcee
Q 036229 895 -----FGYSAPVIHCDLKPSNVLLDDN----MVAHLSDFGIAKL 929 (982)
Q Consensus 895 -----~~~~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~ 929 (982)
......++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1224579999999999999876 7899999999875
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.91 E-value=0.0022 Score=69.72 Aligned_cols=140 Identities=9% Similarity=0.104 Sum_probs=81.8
Q ss_pred ceeeeeceEEEEEEEeCCCeEEEEEEeecccchhhhhHHHHHHHhhhcCCc--cceeEEee-----ecCCCeeEEEEEec
Q 036229 786 NLIGRGGFGSVYKARIGEGMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHR--NLIKVISS-----CSTEEFKALILEYM 858 (982)
Q Consensus 786 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~l~~~-----~~~~~~~~lv~E~~ 858 (982)
+.++ |....||++...+|+.+++|+..... .....+..|..+++.+... .+++++.. ....+..+++|||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 77889999887677789999986331 2345677788888777422 24444443 11245667899999
Q ss_pred cCCChH-----HH---------Hhc----C----CCcCCHHHH----HHH---------------HHHHHHHHHHHHc--
Q 036229 859 PHGSLE-----KS---------LYS----S----NYILDIFQR----LNI---------------MVDVATTLEYLHF-- 895 (982)
Q Consensus 859 ~~gsL~-----~~---------l~~----~----~~~~~~~~~----~~i---------------~~qi~~~L~yLH~-- 895 (982)
+|..+. .. ++. . ....++... ..+ ...+...++.+..
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875431 10 110 0 011121110 001 1111122223221
Q ss_pred --cCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 896 --GYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 896 --~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
.....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1256789999999999998 4 899999988764
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.85 E-value=0.0033 Score=71.38 Aligned_cols=74 Identities=14% Similarity=0.144 Sum_probs=49.1
Q ss_pred cceeeeeceEEEEEEEeCC-CeEEEEEEeecccchhhhhHHHHHHHhhhcCCccc-eeEEeeecCCCeeEEEEEeccCCC
Q 036229 785 NNLIGRGGFGSVYKARIGE-GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRNL-IKVISSCSTEEFKALILEYMPHGS 862 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~lv~E~~~~gs 862 (982)
.+.|+.|-...+|++...+ +..+++|+....... ..+-.+|..+++.+...++ +++++.+. + ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 4578888889999998765 588999987543221 1223679999988864444 57777763 2 35999998754
Q ss_pred h
Q 036229 863 L 863 (982)
Q Consensus 863 L 863 (982)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.75 E-value=0.00041 Score=68.44 Aligned_cols=42 Identities=21% Similarity=0.166 Sum_probs=20.5
Q ss_pred ccCcCcccEEEeeccccccccc----cccccccchhhhhccCCCCC
Q 036229 198 LSNCKYLEILSLSINNLLGAIP----KEIGNLTKLKELYLGYSGLQ 239 (982)
Q Consensus 198 ~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~ 239 (982)
+..-+.|+.|+|++|+|....- +.+..-+.|++|+|+.|.|.
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3344556666666666553222 22233344555555555554
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.69 E-value=0.0026 Score=71.88 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=49.9
Q ss_pred cceeeeeceEEEEEEEeCC--------CeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEEE
Q 036229 785 NNLIGRGGFGSVYKARIGE--------GMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.+.|+.|....||++...+ ++.+++|+.... ...+.+..|..+++.+. +.-.+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4577888889999998653 578999988432 11145557999888874 3234677776543 3899
Q ss_pred EeccCCCh
Q 036229 856 EYMPHGSL 863 (982)
Q Consensus 856 E~~~~gsL 863 (982)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986443
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.61 E-value=0.00072 Score=66.68 Aligned_cols=18 Identities=39% Similarity=0.606 Sum_probs=9.0
Q ss_pred hhccCCCcEEEccCCccc
Q 036229 270 LANLTGLEVLKLGKNFLT 287 (982)
Q Consensus 270 l~~l~~L~~L~Ls~N~l~ 287 (982)
+..-+.|++|+|++|+|+
T Consensus 94 L~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 94 IETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHHCSSCCEEECCSSBCC
T ss_pred HhcCCccCeEecCCCcCC
Confidence 333445555555555554
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.57 E-value=0.0025 Score=58.67 Aligned_cols=56 Identities=20% Similarity=0.236 Sum_probs=43.7
Q ss_pred eeeccccccc-ccccccccCccCcceEecccccccCCccccccCCCCCCeeeCCCCcCC
Q 036229 597 GIDFSTNNFS-DVIPTVIGGLTNLQYLFLGYNRLQGSISESFGDLISLKSLNLSNNNLS 654 (982)
Q Consensus 597 ~Ldls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 654 (982)
.+|-+++.++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777775 23454432 46899999999999877888999999999999999875
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.55 E-value=0.0047 Score=68.46 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=45.7
Q ss_pred cceeeeeceEEEEEEEeCC---------CeEEEEEEeecccchhhhhHHHHHHHhhhcCCcc-ceeEEeeecCCCeeEEE
Q 036229 785 NNLIGRGGFGSVYKARIGE---------GMEVAVKVFDLQCGRAFKSFDVECEMMKSIRHRN-LIKVISSCSTEEFKALI 854 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~lv 854 (982)
.+.++.|....+|++...+ ++.+++|+...... ...+...|.++++.+...+ .+++++... -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence 3567778888999998643 26888998754322 2223467888888874323 456776542 2689
Q ss_pred EEeccCCCh
Q 036229 855 LEYMPHGSL 863 (982)
Q Consensus 855 ~E~~~~gsL 863 (982)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.41 E-value=0.012 Score=64.34 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=29.1
Q ss_pred CCCeEEcCCCCCCEEEcCCCcEEEEeecCceee
Q 036229 898 SAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 898 ~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 930 (982)
...++|+|+.+.||++++++.+.++||+.+..-
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 457999999999999998888999999988753
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.02 E-value=0.015 Score=64.45 Aligned_cols=141 Identities=15% Similarity=0.154 Sum_probs=84.0
Q ss_pred cceeeeeceEEEEEEEeCC--------CeEEEEEEeecccch------------------hhhhHHHHHHHhhhcC-Ccc
Q 036229 785 NNLIGRGGFGSVYKARIGE--------GMEVAVKVFDLQCGR------------------AFKSFDVECEMMKSIR-HRN 837 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~E~~~l~~l~-h~n 837 (982)
.+.+..|--..+|++..++ .+.|.+++.-..... ..+....|.++++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3566668888999998653 367888887433211 0112335888888873 444
Q ss_pred ceeEEeeecCCCeeEEEEEeccCCChHH--H---------------HhcC----CCcCC--HHHHHHHHHHHH-------
Q 036229 838 LIKVISSCSTEEFKALILEYMPHGSLEK--S---------------LYSS----NYILD--IFQRLNIMVDVA------- 887 (982)
Q Consensus 838 Iv~l~~~~~~~~~~~lv~E~~~~gsL~~--~---------------l~~~----~~~~~--~~~~~~i~~qi~------- 887 (982)
.+++++++.. .+|+||++|.++.. + ++.. ..... +....++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 6778877653 28999998755421 1 0111 11122 223333333221
Q ss_pred ---------------HHHH----HHH-ccCCCCeEEcCCCCCCEEEcCC------CcEEEEeecCcee
Q 036229 888 ---------------TTLE----YLH-FGYSAPVIHCDLKPSNVLLDDN------MVAHLSDFGIAKL 929 (982)
Q Consensus 888 ---------------~~L~----yLH-~~~~~~ivHrDlkp~NILl~~~------~~~kL~DFGla~~ 929 (982)
.-+. ++. ......++|+|+.+.||+++++ +.+.++||..|..
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 222 1234579999999999999876 7899999998874
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.99 E-value=0.075 Score=59.43 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=84.6
Q ss_pred cceeeeeceEEEEEEEeCC--------CeEEEEEEeecccchhhhhHHHHHHHhhhcC-CccceeEEeeecCCCeeEEEE
Q 036229 785 NNLIGRGGFGSVYKARIGE--------GMEVAVKVFDLQCGRAFKSFDVECEMMKSIR-HRNLIKVISSCSTEEFKALIL 855 (982)
Q Consensus 785 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~lv~ 855 (982)
.+.+..|-...+|++...+ ++.|++|+..... ....+..+|.++++.+. +.-.+++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567678888999998653 5789999865432 22234467888888874 333466666443 26899
Q ss_pred EeccCCChHH-------H-------Hh------c-----C---C-CcCCHHHHHHHHHHH-------------------H
Q 036229 856 EYMPHGSLEK-------S-------LY------S-----S---N-YILDIFQRLNIMVDV-------------------A 887 (982)
Q Consensus 856 E~~~~gsL~~-------~-------l~------~-----~---~-~~~~~~~~~~i~~qi-------------------~ 887 (982)
||++|.++.. . +. . . . .+.-+.++.++..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 9999865411 0 00 0 0 1 111133333333222 2
Q ss_pred HHHHHHH---------------------ccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCcee
Q 036229 888 TTLEYLH---------------------FGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAKL 929 (982)
Q Consensus 888 ~~L~yLH---------------------~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 929 (982)
..+++|. ......++|+|+.+.||+ +.++.+.++||..|..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233332 111357899999999999 7788999999999875
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.42 E-value=0.31 Score=54.19 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=25.6
Q ss_pred CeEEcCCCCCCEEE------cCCCcEEEEeecCcee
Q 036229 900 PVIHCDLKPSNVLL------DDNMVAHLSDFGIAKL 929 (982)
Q Consensus 900 ~ivHrDlkp~NILl------~~~~~~kL~DFGla~~ 929 (982)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 3456899999999875
No 447
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.56 E-value=0.7 Score=32.63 Aligned_cols=16 Identities=6% Similarity=0.187 Sum_probs=6.3
Q ss_pred hhHHHHHHHHHhhhee
Q 036229 732 PLSTIFIIVVILLIVR 747 (982)
Q Consensus 732 ~~~~~~~~v~~~~~~~ 747 (982)
+++.+++++.++++++
T Consensus 20 Gv~~~~ii~~~~~~~~ 35 (44)
T 2ks1_B 20 ALLLLLVVALGIGLFM 35 (44)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3444444443333333
No 448
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=68.48 E-value=1.2 Score=31.38 Aligned_cols=15 Identities=13% Similarity=0.208 Sum_probs=5.9
Q ss_pred hHHHHHHHHHhhhee
Q 036229 733 LSTIFIIVVILLIVR 747 (982)
Q Consensus 733 ~~~~~~~v~~~~~~~ 747 (982)
++.+++++..+++++
T Consensus 20 v~~v~ii~~~~~~~~ 34 (44)
T 2l2t_A 20 LFILVIVGLTFAVYV 34 (44)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 444334443333333
No 449
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=67.43 E-value=1.2 Score=31.30 Aligned_cols=26 Identities=15% Similarity=0.364 Sum_probs=11.6
Q ss_pred EeeeehhhHHHHHHHHHhhheeeccc
Q 036229 726 LLGIVLPLSTIFIIVVILLIVRYRKR 751 (982)
Q Consensus 726 i~~i~~~~~~~~~~v~~~~~~~~r~~ 751 (982)
++++++++..+++++.+++++.+||+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 45555554444444444444443333
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=66.63 E-value=0.5 Score=53.50 Aligned_cols=60 Identities=8% Similarity=0.052 Sum_probs=17.2
Q ss_pred CccceeeeeceEEEEEEEeCC-CeEEEE------EEeecc--cchhhhhHHHHHHHhhhcCCccceeEEeee
Q 036229 783 SENNLIGRGGFGSVYKARIGE-GMEVAV------KVFDLQ--CGRAFKSFDVECEMMKSIRHRNLIKVISSC 845 (982)
Q Consensus 783 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 845 (982)
...+.+| ||.||+|.+.. ..+||+ |..+.. .......+.+|..+++..+|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 3456676 99999998754 467888 665432 122335678899999999999999987754
No 451
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=60.55 E-value=16 Score=36.07 Aligned_cols=86 Identities=10% Similarity=0.136 Sum_probs=59.4
Q ss_pred CCccceeEEeeecCCCeeEEEEEeccCCChHHHHhcCCCcCCHHHHHHHHHHHHHHHH-HHHccCCCCeEEcCCCCCCEE
Q 036229 834 RHRNLIKVISSCSTEEFKALILEYMPHGSLEKSLYSSNYILDIFQRLNIMVDVATTLE-YLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 834 ~h~nIv~l~~~~~~~~~~~lv~E~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~L~-yLH~~~~~~ivHrDlkp~NIL 912 (982)
.||++ -...-.+++...+.++--+++.=...++ ..+...+++++..|+.... + ...-+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~-----~~~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHH-----SARRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSC-----CSSSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHh-----hhCceeEEEeCceEE
Confidence 67888 3334466677666666543332223332 2577888888888877655 3 345688899999999
Q ss_pred EcCCCcEEEEeecCceee
Q 036229 913 LDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 913 l~~~~~~kL~DFGla~~~ 930 (982)
++.++.+++.-.|+-..+
T Consensus 117 f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL 134 (219)
T ss_dssp ECTTCCEEESCCEETTTB
T ss_pred EeCCCcEEEEEcCCcccC
Confidence 999999999988875443
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=55.32 E-value=12 Score=36.92 Aligned_cols=86 Identities=7% Similarity=0.128 Sum_probs=60.2
Q ss_pred CCccceeEEeeecCCCeeEEEEEeccCC-ChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEE
Q 036229 834 RHRNLIKVISSCSTEEFKALILEYMPHG-SLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVL 912 (982)
Q Consensus 834 ~h~nIv~l~~~~~~~~~~~lv~E~~~~g-sL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NIL 912 (982)
.||+++.. ..-.+++...+.++.-+.+ +... ++ ..+...+++++.+|+...++++ .-+|--+.|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 68888866 4555566555555443322 2322 32 3577889999999988775555 3478899999999
Q ss_pred EcCCCcEEEEeecCceee
Q 036229 913 LDDNMVAHLSDFGIAKLL 930 (982)
Q Consensus 913 l~~~~~~kL~DFGla~~~ 930 (982)
++.++.+++.-.|+-..+
T Consensus 112 f~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp ECTTSCEEESCCEETTTB
T ss_pred EcCCCCEEEEEccCccCC
Confidence 999999999988875544
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=34.79 E-value=7.2 Score=26.56 Aligned_cols=12 Identities=8% Similarity=0.155 Sum_probs=6.2
Q ss_pred EeeeehhhHHHH
Q 036229 726 LLGIVLPLSTIF 737 (982)
Q Consensus 726 i~~i~~~~~~~~ 737 (982)
+++++++.++.+
T Consensus 13 IAGiVvG~v~gv 24 (38)
T 2k1k_A 13 IVAVIFGLLLGA 24 (38)
T ss_dssp HHHHHHHHHHHH
T ss_pred eeeeehHHHHHH
Confidence 456666544433
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=32.75 E-value=2.1e+02 Score=32.96 Aligned_cols=46 Identities=22% Similarity=0.156 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHH--HHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEeecCce
Q 036229 876 IFQRLNIMVDVAT--TLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSDFGIAK 928 (982)
Q Consensus 876 ~~~~~~i~~qi~~--~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 928 (982)
+..+..+++.+|- .+-|+= || +|=.++|||++.+|++.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3445555555443 344554 33 5888999999999999999999874
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.22 E-value=47 Score=28.13 Aligned_cols=46 Identities=15% Similarity=0.088 Sum_probs=23.4
Q ss_pred CCCCCCCccccCcCCCCeEEeeccCCCCCCCcccCCCccccEEEccC
Q 036229 485 KLNGSIPITLGKLQKLQGLHLEDNKLEGPIPDDICRLTKLYELGLSG 531 (982)
Q Consensus 485 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 531 (982)
.++.+-..+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444555555555555555542 3334444555555555555543
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.73 E-value=1.2e+02 Score=25.58 Aligned_cols=46 Identities=17% Similarity=0.008 Sum_probs=25.7
Q ss_pred ccccCCCcccccccccceEEecCCCCCCCCCccccCcCCCCeEEeec
Q 036229 461 NVSGGFPKEIGNLTNLIGIYLGGNKLNGSIPITLGKLQKLQGLHLED 507 (982)
Q Consensus 461 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 507 (982)
.++.+-...|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444555666666666666543 3445555666666666666554
No 457
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=29.10 E-value=17 Score=24.52 Aligned_cols=21 Identities=38% Similarity=0.679 Sum_probs=7.9
Q ss_pred ehhhHHHHHHHHHhhheeecc
Q 036229 730 VLPLSTIFIIVVILLIVRYRK 750 (982)
Q Consensus 730 ~~~~~~~~~~v~~~~~~~~r~ 750 (982)
+++++++.++..+++++.+++
T Consensus 14 vlal~vi~iisLIiLi~~w~q 34 (39)
T 2l6w_A 14 ILALVVLTIISLIILIMLWQK 34 (39)
Confidence 333333333333333333333
No 458
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=21.55 E-value=1e+02 Score=30.33 Aligned_cols=60 Identities=15% Similarity=0.015 Sum_probs=45.7
Q ss_pred ChHHHHhcCCCcCCHHHHHHHHHHHHHHHHHHHccCCCCeEEcCCCCCCEEEcCCCcEEEEe
Q 036229 862 SLEKSLYSSNYILDIFQRLNIMVDVATTLEYLHFGYSAPVIHCDLKPSNVLLDDNMVAHLSD 923 (982)
Q Consensus 862 sL~~~l~~~~~~~~~~~~~~i~~qi~~~L~yLH~~~~~~ivHrDlkp~NILl~~~~~~kL~D 923 (982)
+|.+++...+.++++.+++.++.|.+.+|.-.-. ++.-..+=+.|..|++..+|.|...+
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc
Confidence 7999999889999999999999999999887621 11111333456888999998887663
Done!