Your job contains 1 sequence.
>036232
MLRRRERETSRRPLLFQRKKLKKGTTTRFNWVGGNTKDKSEIENSKLSSEVLREAVSTIC
GDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDAQHVEQAE
KIGMDYMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLV
THQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKSW
QNVRCLHLKSTMGRPQRIY
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036232
(259 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2042087 - symbol:PGY1 "PIGGYBACK1" species:370... 871 3.7e-87 1
TAIR|locus:2201811 - symbol:AT1G08360 species:3702 "Arabi... 868 7.7e-87 1
TAIR|locus:2176337 - symbol:AT5G22440 species:3702 "Arabi... 845 2.1e-84 1
FB|FBgn0036213 - symbol:RpL10Ab "Ribosomal protein L10Ab"... 676 1.7e-66 1
GENEDB_PFALCIPARUM|PF14_0391 - symbol:PF14_0391 "ribosoma... 647 2.0e-63 1
UNIPROTKB|Q8IL58 - symbol:PF14_0391 "60S ribosomal protei... 647 2.0e-63 1
ZFIN|ZDB-GENE-030131-2025 - symbol:rpl10a "ribosomal prot... 647 2.0e-63 1
WB|WBGene00004412 - symbol:rpl-1 species:6239 "Caenorhabd... 645 3.3e-63 1
UNIPROTKB|Q5E9E6 - symbol:RPL10A "60S ribosomal protein L... 644 4.2e-63 1
UNIPROTKB|E2R9V0 - symbol:RPL10A "Ribosomal protein" spec... 644 4.2e-63 1
UNIPROTKB|P62906 - symbol:RPL10A "60S ribosomal protein L... 644 4.2e-63 1
RGD|620497 - symbol:Rpl10a "ribosomal protein L10A" speci... 644 4.2e-63 1
MGI|MGI:1343877 - symbol:Rpl10a "ribosomal protein L10A" ... 639 1.4e-62 1
RGD|1559639 - symbol:RGD1559639 "similar to ribosomal pro... 633 6.2e-62 1
UNIPROTKB|G3X7N2 - symbol:G3X7N2 "Ribosomal protein" spec... 632 7.9e-62 1
RGD|1566137 - symbol:RGD1566137 "similar to ribosomal pro... 631 1.0e-61 1
POMBASE|SPBC30D10.18c - symbol:rpl102 "60S ribosomal prot... 629 1.6e-61 1
POMBASE|SPCC1183.08c - symbol:rpl101 "60S ribosomal prote... 626 3.4e-61 1
UNIPROTKB|E1BKD0 - symbol:E1BKD0 "Ribosomal protein" spec... 625 4.3e-61 1
RGD|1588266 - symbol:LOC680700 "similar to ribosomal prot... 615 5.0e-60 1
ASPGD|ASPL0000057044 - symbol:AN1122 species:162425 "Emer... 595 6.6e-58 1
DICTYBASE|DDB_G0276871 - symbol:rpl10a "S60 ribosomal pro... 593 1.1e-57 1
CGD|CAL0005037 - symbol:RPL10A species:5476 "Candida albi... 590 2.2e-57 1
UNIPROTKB|G4MTC2 - symbol:MGG_04696 "Ribosomal protein" s... 588 3.6e-57 1
SGD|S000006141 - symbol:RPL1A "Ribosomal 60S subunit prot... 580 2.5e-56 1
SGD|S000003103 - symbol:RPL1B "Ribosomal 60S subunit prot... 580 2.5e-56 1
UNIPROTKB|Q6EE62 - symbol:RPL10A "Ribosomal protein" spec... 537 9.2e-52 1
UNIPROTKB|J9P122 - symbol:J9P122 "Ribosomal protein" spec... 524 2.2e-50 1
RGD|1562962 - symbol:RGD1562962 "similar to ribosomal pro... 515 2.0e-49 1
UNIPROTKB|F1RS60 - symbol:F1RS60 "Uncharacterized protein... 486 2.3e-46 1
FB|FBgn0038281 - symbol:RpL10Aa "Ribosomal protein L10Aa"... 484 3.8e-46 1
UNIPROTKB|F1RYZ5 - symbol:RPL10A "Ribosomal protein" spec... 472 7.1e-45 1
UNIPROTKB|F1M8D2 - symbol:F1M8D2 "Ribosomal protein" spec... 469 1.5e-44 1
UNIPROTKB|P53027 - symbol:RPL10A "60S ribosomal protein L... 440 1.7e-41 1
UNIPROTKB|F1SCR8 - symbol:F1SCR8 "Uncharacterized protein... 419 2.9e-39 1
UNIPROTKB|I3LES0 - symbol:I3LES0 "Uncharacterized protein... 370 4.6e-34 1
UNIPROTKB|J9P1H7 - symbol:J9P1H7 "Uncharacterized protein... 367 9.5e-34 1
UNIPROTKB|F1Q2K0 - symbol:LOC486972 "Uncharacterized prot... 355 1.8e-32 1
UNIPROTKB|F1RX79 - symbol:F1RX79 "Uncharacterized protein... 328 1.3e-29 1
TAIR|locus:2041554 - symbol:AT2G42650 species:3702 "Arabi... 125 7.3e-07 2
TAIR|locus:2098979 - symbol:AT3G58660 species:3702 "Arabi... 119 0.00011 1
TAIR|locus:2041519 - symbol:AT2G42710 species:3702 "Arabi... 118 0.00013 1
TIGR_CMR|CBU_0227 - symbol:CBU_0227 "ribosomal protein L1... 113 0.00014 1
UNIPROTKB|Q06797 - symbol:rplA "50S ribosomal protein L1"... 109 0.00043 1
TIGR_CMR|BA_0098 - symbol:BA_0098 "ribosomal protein L1" ... 107 0.00072 1
TIGR_CMR|CHY_2322 - symbol:CHY_2322 "ribosomal protein L1... 107 0.00073 1
>TAIR|locus:2042087 [details] [associations]
symbol:PGY1 "PIGGYBACK1" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0015934 "large ribosomal subunit"
evidence=IEA;ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IGI]
[GO:0048569 "post-embryonic organ development" evidence=IGI]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AC006232 EMBL:AC005824 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
GO:GO:0009955 GO:GO:0048569 eggNOG:COG0081 HOGENOM:HOG000207014
ProtClustDB:CLSN2687446 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AF360146 EMBL:AY056371 EMBL:AY081263
EMBL:BT006262 EMBL:Z27264 IPI:IPI00541952 PIR:A84674
RefSeq:NP_565654.1 RefSeq:NP_850104.1 UniGene:At.19006
ProteinModelPortal:P59230 SMR:P59230 STRING:P59230 PaxDb:P59230
PRIDE:P59230 EnsemblPlants:AT2G27530.1 EnsemblPlants:AT2G27530.2
GeneID:817299 KEGG:ath:AT2G27530 GeneFarm:212 TAIR:At2g27530
InParanoid:P59230 OMA:MSICILG PhylomeDB:P59230
Genevestigator:P59230 GermOnline:AT2G27530 Uniprot:P59230
Length = 216
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 169/215 (78%), Positives = 186/215 (86%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SKL SE +REA++TI G ++EK RNFVET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 2 SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
MK+CMLGDAQHVE+AEK+G+ MDVE YHAFLASE+VIKQIPR
Sbjct: 62 MKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGLNKAGKFPTLV+HQESLEAKVNETKA VKFQLKKVLCMGVAVGN SMEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
VQ+SVNFLVSLLKK+WQNVRCL+LKSTMG PQRI+
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
>TAIR|locus:2201811 [details] [associations]
symbol:AT1G08360 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AC006932
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 EMBL:AY065077 EMBL:AY114542
IPI:IPI00519555 PIR:C86217 RefSeq:NP_563813.2 UniGene:At.24240
ProteinModelPortal:Q8VZB9 SMR:Q8VZB9 STRING:Q8VZB9 PaxDb:Q8VZB9
PRIDE:Q8VZB9 EnsemblPlants:AT1G08360.1 GeneID:837356
KEGG:ath:AT1G08360 GeneFarm:156 TAIR:At1g08360 eggNOG:COG0081
HOGENOM:HOG000207014 InParanoid:Q8VZB9 OMA:VAVGHMK PhylomeDB:Q8VZB9
ProtClustDB:CLSN2687446 Genevestigator:Q8VZB9 GermOnline:AT1G08360
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
Uniprot:Q8VZB9
Length = 216
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 168/215 (78%), Positives = 186/215 (86%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SKL SE +REA++TI G ++ K RNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 2 SKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
MK+CMLGDAQHVE+AEK+G++ MDVE YHAFLASE+VIKQIPR
Sbjct: 62 MKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN SMEEKQ+FQN
Sbjct: 122 LLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
VQ+SVNFLVSLLKK+WQNVRCL+LKSTMG PQRI+
Sbjct: 182 VQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
>TAIR|locus:2176337 [details] [associations]
symbol:AT5G22440 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AB007651 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 ProtClustDB:CLSN2687446 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 EMBL:AY037253 EMBL:AY077657
EMBL:F19997 IPI:IPI00536065 RefSeq:NP_001078612.1
RefSeq:NP_197636.1 UniGene:At.7367 ProteinModelPortal:P59231
SMR:P59231 STRING:P59231 PRIDE:P59231 EnsemblPlants:AT5G22440.1
EnsemblPlants:AT5G22440.2 GeneID:832305 KEGG:ath:AT5G22440
GeneFarm:211 TAIR:At5g22440 InParanoid:P59231 OMA:GPRNKMP
PhylomeDB:P59231 Genevestigator:P59231 GermOnline:AT5G22440
Uniprot:P59231
Length = 217
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 165/216 (76%), Positives = 183/216 (84%)
Query: 45 SKLSSEVLREAVSTICGDAKE-KNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SKL SE +REA+S+I KE K RNF ETIELQIGLKNYDPQKDKRFSGSVKLPH+PRP
Sbjct: 2 SKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
MK+CMLGDAQHVE+AEKIG++ MDVE +HAFLASE+VIKQIP
Sbjct: 62 KMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN SMEEKQ+FQ
Sbjct: 122 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
NVQ+SVNFLVSLLKK+WQNVRCL+LKSTMG P R++
Sbjct: 182 NVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217
>FB|FBgn0036213 [details] [associations]
symbol:RpL10Ab "Ribosomal protein L10Ab" species:7227
"Drosophila melanogaster" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
EMBL:AE014296 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0000022 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP EMBL:BT014654 RefSeq:NP_648514.1
UniGene:Dm.23143 ProteinModelPortal:Q9VTP4 SMR:Q9VTP4 IntAct:Q9VTP4
MINT:MINT-1551463 STRING:Q9VTP4 PaxDb:Q9VTP4 PRIDE:Q9VTP4
EnsemblMetazoa:FBtr0076032 GeneID:39338 KEGG:dme:Dmel_CG7283
CTD:39338 FlyBase:FBgn0036213 GeneTree:ENSGT00390000008767
InParanoid:Q9VTP4 OrthoDB:EOG4T76KC PhylomeDB:Q9VTP4
ChiTaRS:RpL10Ab GenomeRNAi:39338 NextBio:813157 Bgee:Q9VTP4
GermOnline:CG7283 Uniprot:Q9VTP4
Length = 217
Score = 676 (243.0 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 128/215 (59%), Positives = 162/215 (75%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S + L E V+ + + +K R F+ET+ELQIGLKNYDPQKDKRFSG+VKL HIPRP
Sbjct: 3 SKVSRDTLYEGVNGLLEASAKKKRGFLETVELQIGLKNYDPQKDKRFSGTVKLKHIPRPK 62
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
MKVC+LGD QH ++A+ +D+MD E Y AFLASE++IKQIPR
Sbjct: 63 MKVCILGDQQHCDEAKANNVDFMDAEALKKLNKNKKLVKKLAKSYDAFLASESLIKQIPR 122
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGLNKAGKFP L++HQES+ K+ E K+ +KFQ+KKVLC+ VAVG+ M+ ++ QN
Sbjct: 123 LLGPGLNKAGKFPALLSHQESMIGKIEEVKSTIKFQMKKVLCLSVAVGHVGMKSDELAQN 182
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
V LS+NFLVSLLKK+WQNVR LH+KS+MG PQR+Y
Sbjct: 183 VNLSINFLVSLLKKNWQNVRSLHVKSSMGPPQRLY 217
>GENEDB_PFALCIPARUM|PF14_0391 [details] [associations]
symbol:PF14_0391 "ribosomal protein L1,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865
GO:GO:0022625 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 OMA:GPRNKMP ProtClustDB:PTZ00029
RefSeq:XP_001348565.1 ProteinModelPortal:Q8IL58 MINT:MINT-1664387
PRIDE:Q8IL58 EnsemblProtists:PF14_0391:mRNA GeneID:811973
KEGG:pfa:PF14_0391 EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 119/215 (55%), Positives = 164/215 (76%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SKL+ ++L++A+S + K+K R FVETIELQIGLK+YD Q+DKRFSG+V+L + R
Sbjct: 2 SKLNQDLLKKAISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
+KVC+LGDA HVE+A+K+ +DYMD+E Y AFLAS+ ++ QIP+
Sbjct: 62 LKVCILGDAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQIPK 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGLNKAGKFP+L+TH + + K+ E K+ +KFQLKKVLCMGV VG+ +++E+++ N
Sbjct: 122 LLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELRSN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ ++NFLVSLLKK+WQN+R LH+KSTMG+PQRIY
Sbjct: 182 IVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIY 216
>UNIPROTKB|Q8IL58 [details] [associations]
symbol:PF14_0391 "60S ribosomal protein L1, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
OMA:GPRNKMP ProtClustDB:PTZ00029 RefSeq:XP_001348565.1
ProteinModelPortal:Q8IL58 MINT:MINT-1664387 PRIDE:Q8IL58
EnsemblProtists:PF14_0391:mRNA GeneID:811973 KEGG:pfa:PF14_0391
EuPathDB:PlasmoDB:PF3D7_1441200 Uniprot:Q8IL58
Length = 217
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 119/215 (55%), Positives = 164/215 (76%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SKL+ ++L++A+S + K+K R FVETIELQIGLK+YD Q+DKRFSG+V+L + R
Sbjct: 2 SKLNQDLLKKAISDVFEGTKQKKRKFVETIELQIGLKDYDTQRDKRFSGTVRLSNEVRKK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
+KVC+LGDA HVE+A+K+ +DYMD+E Y AFLAS+ ++ QIP+
Sbjct: 62 LKVCILGDAVHVEEAQKLELDYMDIEAMKKLNKDKTLVKKLAKKYDAFLASQVILPQIPK 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGLNKAGKFP+L+TH + + K+ E K+ +KFQLKKVLCMGV VG+ +++E+++ N
Sbjct: 122 LLGPGLNKAGKFPSLITHNDKINDKILELKSSIKFQLKKVLCMGVPVGHANLKEEELRSN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ ++NFLVSLLKK+WQN+R LH+KSTMG+PQRIY
Sbjct: 182 IVHAINFLVSLLKKNWQNIRTLHIKSTMGKPQRIY 216
>ZFIN|ZDB-GENE-030131-2025 [details] [associations]
symbol:rpl10a "ribosomal protein L10a"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
ZFIN:ZDB-GENE-030131-2025 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
CTD:4736 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:BC059454
EMBL:BC071510 IPI:IPI00500253 RefSeq:NP_955930.1 UniGene:Dr.26808
ProteinModelPortal:Q6PC69 STRING:Q6PC69 PRIDE:Q6PC69
Ensembl:ENSDART00000062983 GeneID:323305 KEGG:dre:323305
InParanoid:Q6PC69 NextBio:20808180 ArrayExpress:Q6PC69 Bgee:Q6PC69
Uniprot:Q6PC69
Length = 216
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 121/215 (56%), Positives = 159/215 (73%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S + L EAV + ++ K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SKVSRDTLYEAVKEVQAGSRRKKRKFLETVELQISLKNYDPQKDKRFSGTVRLKTTPRPK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
VC+LGD QH ++A+ + +MD+E Y AFLASE++IKQIPR
Sbjct: 62 FSVCVLGDQQHCDEAKAAELPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
+LGPGLNKAGKFP+L+TH E+L KV+E K+ +KFQ+KKVLC+ VAVG+ M E+++ N
Sbjct: 122 ILGPGLNKAGKFPSLLTHNENLGTKVDEVKSTIKFQMKKVLCLAVAVGHVKMSEEELVYN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 IHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 216
>WB|WBGene00004412 [details] [associations]
symbol:rpl-1 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0003723
GO:GO:0003735 EMBL:FO081777 GO:GO:0015934 SUPFAM:SSF56808 KO:K02865
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 RefSeq:NP_491061.1
ProteinModelPortal:Q9N4I4 SMR:Q9N4I4 DIP:DIP-25861N IntAct:Q9N4I4
MINT:MINT-1038891 STRING:Q9N4I4 PaxDb:Q9N4I4 PRIDE:Q9N4I4
EnsemblMetazoa:Y71F9AL.13a.1 EnsemblMetazoa:Y71F9AL.13a.2
GeneID:171853 KEGG:cel:CELE_Y71F9AL.13 UCSC:Y71F9AL.13a.1
CTD:171853 WormBase:Y71F9AL.13a InParanoid:Q9N4I4 NextBio:872975
ArrayExpress:Q9N4I4 Uniprot:Q9N4I4
Length = 216
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 122/215 (56%), Positives = 160/215 (74%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S E L EA++ + + EK R F ETIELQIGLKNYDPQKDKRFSGS++L HIPRP
Sbjct: 2 SKVSRESLNEAIAEVLKGSSEKPRKFRETIELQIGLKNYDPQKDKRFSGSIRLKHIPRPN 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
MKVC+ GD H+++A + M + Y AF+ASE++IKQIPR
Sbjct: 62 MKVCVFGDQHHLDEAAAGDIPSMSADDLKKLNKQKKLIKKLAKSYDAFIASESLIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
+LGPGLNKAGKFP++VTH ESL++K +E +A VKFQ+KKVLC+ VAVG+ + ++++ N
Sbjct: 122 ILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ LS+NFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 ISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
>UNIPROTKB|Q5E9E6 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
OMA:GPRNKMP GeneTree:ENSGT00390000008767 EMBL:BT020974
EMBL:BC102653 IPI:IPI00710091 RefSeq:NP_001015647.1
UniGene:Bt.49789 UniGene:Bt.63495 ProteinModelPortal:Q5E9E6
SMR:Q5E9E6 STRING:Q5E9E6 PRIDE:Q5E9E6 Ensembl:ENSBTAT00000025963
GeneID:533310 KEGG:bta:533310 CTD:4736 HOVERGEN:HBG055239
InParanoid:Q5E9E6 OrthoDB:EOG4HQDKC NextBio:20875996 Uniprot:Q5E9E6
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 120/216 (55%), Positives = 160/216 (74%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>UNIPROTKB|E2R9V0 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
GeneTree:ENSGT00390000008767 EMBL:AAEX03008269
ProteinModelPortal:E2R9V0 PRIDE:E2R9V0 Ensembl:ENSCAFT00000002038
NextBio:20850823 Uniprot:E2R9V0
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 120/216 (55%), Positives = 160/216 (74%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>UNIPROTKB|P62906 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0003735 "structural constituent
of ribosome" evidence=NAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0009653 "anatomical structure
morphogenesis" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0005739 Reactome:REACT_116125 EMBL:CH471081 GO:GO:0000184
GO:GO:0006413 GO:GO:0003723 GO:GO:0003735 GO:GO:0009653
SUPFAM:SSF56808 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
EMBL:AL022721 KO:K02865 GO:GO:0006614 GO:GO:0022625 GO:GO:0019083
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG CTD:4736
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:U12404 EMBL:AB082926
EMBL:BT020040 EMBL:BT020041 EMBL:AK313181 EMBL:BC006791
EMBL:BC011366 EMBL:BC070216 IPI:IPI00412579 RefSeq:NP_009035.3
UniGene:Hs.148340 UniGene:Hs.546269 ProteinModelPortal:P62906
SMR:P62906 IntAct:P62906 MINT:MINT-4999991 STRING:P62906
PhosphoSite:P62906 DMDM:51702773 SWISS-2DPAGE:P62906 PaxDb:P62906
PRIDE:P62906 DNASU:4736 Ensembl:ENST00000322203 GeneID:4736
KEGG:hsa:4736 UCSC:uc003okp.1 GeneCards:GC06P035582 HGNC:HGNC:10299
neXtProt:NX_P62906 PharmGKB:PA34661 InParanoid:P62906
PhylomeDB:P62906 ChiTaRS:RPL10A GenomeRNAi:4736 NextBio:18266
Bgee:P62906 CleanEx:HS_RPL10A Genevestigator:P62906
GermOnline:ENSG00000198755 Uniprot:P62906
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 120/216 (55%), Positives = 160/216 (74%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>RGD|620497 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006412 "translation"
evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO;TAS] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 RGD:620497 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
eggNOG:COG0081 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:GPRNKMP
GeneTree:ENSGT00390000008767 CTD:4736 HOVERGEN:HBG055239
OrthoDB:EOG4HQDKC EMBL:X93352 EMBL:BC058468 IPI:IPI00339012
PIR:JC4677 RefSeq:NP_112327.1 UniGene:Rn.161731 UniGene:Rn.2262
ProteinModelPortal:P62907 SMR:P62907 IntAct:P62907 STRING:P62907
PhosphoSite:P62907 PRIDE:P62907 Ensembl:ENSRNOT00000000603
GeneID:81729 KEGG:rno:81729 UCSC:RGD:620497 InParanoid:P62907
NextBio:615392 Genevestigator:P62907 GermOnline:ENSRNOG00000000505
Uniprot:P62907
Length = 217
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 120/216 (55%), Positives = 160/216 (74%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>MGI|MGI:1343877 [details] [associations]
symbol:Rpl10a "ribosomal protein L10A" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 MGI:MGI:1343877 Prosite:PS01199
GO:GO:0005739 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 HOGENOM:HOG000207014
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC ChiTaRS:RPL10A EMBL:U12403
EMBL:D10916 IPI:IPI00127085 UniGene:Mm.336955 UniGene:Mm.467207
ProteinModelPortal:P53026 SMR:P53026 IntAct:P53026 STRING:P53026
PhosphoSite:P53026 PaxDb:P53026 PRIDE:P53026 InParanoid:P53026
CleanEx:MM_RPL10A Genevestigator:P53026
GermOnline:ENSMUSG00000037805 GermOnline:ENSMUSG00000061631
Uniprot:P53026
Length = 217
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 119/216 (55%), Positives = 159/216 (73%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++ + + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDERKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>RGD|1559639 [details] [associations]
symbol:RGD1559639 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1559639 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00781415 RefSeq:XP_001080284.1 RefSeq:XP_345687.1
Ensembl:ENSRNOT00000059150 GeneID:366656 KEGG:rno:366656
UCSC:RGD:1559639 CTD:366656 NextBio:689802 Uniprot:D3ZBX4
Length = 217
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 118/216 (54%), Positives = 158/216 (73%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSHDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKVVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNK GKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKVGKFPSLMTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDKLVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQ +Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQHLY 217
>UNIPROTKB|G3X7N2 [details] [associations]
symbol:G3X7N2 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02002354
Ensembl:ENSBTAT00000039021 OMA:EHIYENI NextBio:20924953
Uniprot:G3X7N2
Length = 217
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 118/216 (54%), Positives = 158/216 (73%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S L EAV + + K+R F+ET++LQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRNTLYEAVREVLHGNQRKHRKFLETVKLQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + + D+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHTDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVGEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>RGD|1566137 [details] [associations]
symbol:RGD1566137 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1566137 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 OMA:VAVGHMK Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
EMBL:AC095904 IPI:IPI00369431 RefSeq:XP_001071067.1
RefSeq:XP_217361.3 Ensembl:ENSRNOT00000044603 GeneID:301299
KEGG:rno:301299 UCSC:RGD:1566137 CTD:301299 NextBio:648511
Uniprot:D4A7Y6
Length = 217
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 117/216 (54%), Positives = 158/216 (73%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + +MD+E Y FLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLDKKYDGFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KK+LC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKLLCLAVAVGHMKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQ +Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQHLY 217
>POMBASE|SPBC30D10.18c [details] [associations]
symbol:rpl102 "60S ribosomal protein L10a"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 PomBase:SPBC30D10.18c Prosite:PS01199
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 KO:K02865 GO:GO:0022625
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG PIR:T40178 RefSeq:NP_596267.1
ProteinModelPortal:O14363 SMR:O14363 STRING:O14363 PRIDE:O14363
EnsemblFungi:SPBC30D10.18c.1 GeneID:2540378 KEGG:spo:SPBC30D10.18c
OrthoDB:EOG40ZV6T NextBio:20801506 Uniprot:O14363
Length = 216
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 119/215 (55%), Positives = 158/215 (73%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S +R +V TI ++EK RNF ET+ELQIGLKNYDPQ+DKRFSG++KLP++PRP
Sbjct: 2 SKVSPANIRSSVETILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
M +C+LGDA +++A+ G+D M V+ Y AF+ASE +IKQIPR
Sbjct: 62 MSICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGL+KAGKFP+ V+H + L K+ E K+ +KFQLKKVLC+GVAVG+ M E+Q+ N
Sbjct: 122 LLGPGLSKAGKFPSPVSHSDDLYGKIIEVKSTIKFQLKKVLCLGVAVGHVDMAEEQLAAN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ L++NFLVSLLKK WQN+ L +KSTMG+P R+Y
Sbjct: 182 LSLAINFLVSLLKKGWQNIGSLVIKSTMGKPYRLY 216
>POMBASE|SPCC1183.08c [details] [associations]
symbol:rpl101 "60S ribosomal protein L10a" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155
PomBase:SPCC1183.08c Prosite:PS01199 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
SUPFAM:SSF56808 KO:K02865 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 OMA:VAVGHMK Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OrthoDB:EOG40ZV6T PIR:T40848
RefSeq:NP_587891.1 ProteinModelPortal:O74836 SMR:O74836
STRING:O74836 EnsemblFungi:SPCC1183.08c.1 GeneID:2539222
KEGG:spo:SPCC1183.08c NextBio:20800392 Uniprot:O74836
Length = 216
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 119/215 (55%), Positives = 156/215 (72%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S +R V I ++EK RNF ET+ELQIGLKNYDPQ+DKRFSG++KLP++PRP
Sbjct: 2 SKVSVASVRSNVEQILKGSEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPN 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
M +C+LGDA +++A+ G+D M V+ Y AF+ASE +IKQIPR
Sbjct: 62 MAICILGDAHDLDRAKHGGVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPR 121
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGL+KAGKFP+ V+H + L K+ E K+ +KFQLKKVLC+GVAVG+ M E+Q+ N
Sbjct: 122 LLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIAN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ L+VNFLVSLLKK WQN+ L +KSTMG+P R+Y
Sbjct: 182 IMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216
>UNIPROTKB|E1BKD0 [details] [associations]
symbol:E1BKD0 "Ribosomal protein" species:9913 "Bos taurus"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:DAAA02006245
IPI:IPI00730587 Ensembl:ENSBTAT00000002846 OMA:MEDEAIA
NextBio:20928490 Uniprot:E1BKD0
Length = 217
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 116/216 (53%), Positives = 157/216 (72%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRNTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + ++D+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPHVDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNKAGKFP+L+TH ++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M + ++
Sbjct: 122 RILGPGLNKAGKFPSLLTHNGNMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQN+R L++KSTMG+PQ +Y
Sbjct: 182 NIHLAVNFLVSLLKKNWQNIRALYIKSTMGKPQHLY 217
>RGD|1588266 [details] [associations]
symbol:LOC680700 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1588266 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OMA:MEDEAIA
IPI:IPI00358998 Ensembl:ENSRNOT00000015278 Uniprot:F1LYQ7
Length = 222
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 118/220 (53%), Positives = 156/220 (70%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S + L EAV + + K R F+ET+ELQI LKNYDPQKDKRFSG+VKL PRP
Sbjct: 3 SKVSRDTLYEAVREVLHGNQRKRRKFLETVELQISLKNYDPQKDKRFSGTVKLKSTPRPK 62
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXX-----YHAFLASEAVI 159
VC+LGD QH ++ + + + +MD+E Y AFL SE++I
Sbjct: 63 FSVCVLGDQQHCDEVKAVDIPHMDIEALKKLNKNKKLVKMLAKKKKKKKYDAFLVSESLI 122
Query: 160 KQIPRLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEK 219
KQIPR+L PGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M +
Sbjct: 123 KQIPRILSPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDD 182
Query: 220 QVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
++ N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 183 ELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 222
>ASPGD|ASPL0000057044 [details] [associations]
symbol:AN1122 species:162425 "Emericella nidulans"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 EMBL:BN001308
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 HOGENOM:HOG000207014 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 OMA:MSICILG
EnsemblFungi:CADANIAT00001506 Uniprot:C8VTC4
Length = 217
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 113/216 (52%), Positives = 155/216 (71%)
Query: 45 SKLSSEVLREAVSTICGDAK-EKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SK++ +R+ V + ++ EK RNF+ET+ELQIGLKNYDPQ+DKRFSG++KLP +PRP
Sbjct: 2 SKITVAGVRQNVEQLLNYSQNEKKRNFLETVELQIGLKNYDPQRDKRFSGTIKLPTVPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
M +C+LGD +++A+ G+D M + Y AFLAS+ +IKQIP
Sbjct: 62 GMTICVLGDQHDLDRAKHHGIDAMSADDLKKLNKNKKLIKKLARKYDAFLASDGLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGPGL+KAGKFPT V+H E + KVN+ K+ +KFQLKKVLC+GVAVGN M ++++
Sbjct: 122 RLLGPGLSKAGKFPTPVSHNEDMANKVNDVKSTIKFQLKKVLCLGVAVGNVGMTQEELVA 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L++N+LVSLLKK WQNV L +K+TM P+R+Y
Sbjct: 182 NIMLAINYLVSLLKKGWQNVGSLVIKATMSPPRRVY 217
>DICTYBASE|DDB_G0276871 [details] [associations]
symbol:rpl10a "S60 ribosomal protein L10a"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 dictyBase:DDB_G0276871 Prosite:PS01199
GO:GO:0005615 GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000019 GO:GO:0015934 SUPFAM:SSF56808
KO:K02865 eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
RefSeq:XP_642967.1 HSSP:P49626 ProteinModelPortal:Q86L05
STRING:Q86L05 PRIDE:Q86L05 EnsemblProtists:DDB0229949
GeneID:8620839 KEGG:ddi:DDB_G0276871 OMA:ITNDSRE
ProtClustDB:PTZ00029 Uniprot:Q86L05
Length = 217
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 108/216 (50%), Positives = 154/216 (71%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+SS+ +R VS + +A+E R F+ET+ELQI LKNYD +KDKRFSG +K+ + +P
Sbjct: 2 SKISSDQVRSIVSQLFKEAQESKRGFLETVELQINLKNYDTKKDKRFSGQIKIGTVTKPK 61
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXX-XXXXXXXXXXXXYHAFLASEAVIKQIP 163
+ VC+ D QH ++A KIG ++MD+E Y AFLASE++++Q+P
Sbjct: 62 LSVCVFADQQHCDEATKIGAEFMDIEALKKIGPKNKKAIKKLSKKYDAFLASESILRQVP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
+LLGPGLNK GKFPTL+TH E + +K+N+ K+ VKFQLKKVLC+ VAVG+ + E++V
Sbjct: 122 KLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVAT 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ S+NFLVSLLKK WQN++ L++K++MG R+Y
Sbjct: 182 NIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
>CGD|CAL0005037 [details] [associations]
symbol:RPL10A species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 CGD:CAL0005037 Prosite:PS01199 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 EMBL:AACQ01000155 EMBL:AACQ01000154
GO:GO:0015934 SUPFAM:SSF56808 KO:K02865 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 EMBL:AJ011417 RefSeq:XP_712505.1
RefSeq:XP_712535.1 ProteinModelPortal:Q9UVJ4 SMR:Q9UVJ4
STRING:Q9UVJ4 GeneID:3645843 GeneID:3645868 KEGG:cal:CaO19.10969
KEGG:cal:CaO19.3465 Uniprot:Q9UVJ4
Length = 217
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 116/216 (53%), Positives = 153/216 (70%)
Query: 45 SKLSSEVLREAVSTICGDAKE-KNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SK++S +RE V + + E K RNF+ET+ELQ+GLKNYDPQ+DKRFSG++KLP +PRP
Sbjct: 2 SKITSSGVRENVHKLLEYSTETKKRNFLETVELQVGLKNYDPQRDKRFSGTLKLPQVPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
M +C+ GDA V++A+ +G+D M V+ Y+AF+ASE +IKQIP
Sbjct: 62 NMTICIFGDAFDVDRAKSLGVDAMSVDDLKKLNKNKKLIKKLAKKYNAFIASEVLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGP L+KAGKFPT V+H + L +KV + K+ +KFQLKKVLC+ VAVGN MEE +
Sbjct: 122 RLLGPTLSKAGKFPTPVSHNDDLYSKVTDVKSTIKFQLKKVLCLAVAVGNVDMEEDVLVN 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ ++ NFLVSLLKK+WQNV L +KSTMG RIY
Sbjct: 182 QIMMAANFLVSLLKKNWQNVGSLVIKSTMGPSFRIY 217
>UNIPROTKB|G4MTC2 [details] [associations]
symbol:MGG_04696 "Ribosomal protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0043581 EMBL:CM001232 GO:GO:0015934
SUPFAM:SSF56808 KO:K02865 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 RefSeq:XP_003713675.1 ProteinModelPortal:G4MTC2
SMR:G4MTC2 EnsemblFungi:MGG_04696T0 GeneID:2678194
KEGG:mgr:MGG_04696 Uniprot:G4MTC2
Length = 217
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 114/216 (52%), Positives = 150/216 (69%)
Query: 45 SKLSSEVLREAVSTICG-DAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SK++ +R V + K RNF+ET+ELQIGLKNYDPQ+DKRFSG++KLP +PRP
Sbjct: 2 SKITVAGVRSNVGELLDYSLNTKKRNFLETVELQIGLKNYDPQRDKRFSGTIKLPVVPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
M +C+LGD +++A+ G+D M + Y AF+AS+ +IKQIP
Sbjct: 62 NMAICILGDQHDLDRAKHGGIDSMSADDLKKLNKNKKLIKKLARKYDAFIASDTLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGPGL+KAGKFPT V+H + L KV E K+ +KFQLKKVLCMGVAVGN M ++Q+
Sbjct: 122 RLLGPGLSKAGKFPTPVSHADDLSGKVTEVKSTIKFQLKKVLCMGVAVGNVEMTQEQLVG 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L++N+LVSLLKK WQNV L +K+TM P+RIY
Sbjct: 182 NIMLAINYLVSLLKKGWQNVGSLTIKATMSPPKRIY 217
>SGD|S000006141 [details] [associations]
symbol:RPL1A "Ribosomal 60S subunit protein L1A" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000006141
Prosite:PS01199 GO:GO:0003723 EMBL:BK006949 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 RefSeq:NP_011380.3 GeneID:852742
KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673 PDB:1K5Y
PDB:1S1I PDB:3IZS PDB:3O58 PDB:3O5H PDBsum:1K5Y PDBsum:1S1I
PDBsum:3IZS PDBsum:3O58 PDBsum:3O5H PDB:2NOQ PDBsum:2NOQ
EMBL:X70985 EMBL:Z73576 PIR:S53893 RefSeq:NP_015104.1
ProteinModelPortal:P0CX43 SMR:P0CX43 EnsemblFungi:YGL135W
EnsemblFungi:YPL220W GeneID:855881 KEGG:sce:YPL220W CYGD:YPL220w
EvolutionaryTrace:P0CX43 NextBio:972159 ArrayExpress:P0CX43
GermOnline:YPL220W Uniprot:P0CX43
Length = 217
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/216 (52%), Positives = 151/216 (69%)
Query: 45 SKLSSEVLREAVSTICGDAKE-KNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SK++S +RE V + + E K RNF+ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PRP
Sbjct: 2 SKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
M +C+ GDA V++A+ G+D M V+ Y+AF+ASE +IKQ+P
Sbjct: 62 NMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGP L+KAGKFPT V+H + L KV + ++ +KFQLKKVLC+ VAVGN MEE +
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVN 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ +SVNF VSLLKK+WQNV L +KS+MG R+Y
Sbjct: 182 QILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
>SGD|S000003103 [details] [associations]
symbol:RPL1B "Ribosomal 60S subunit protein L1B" species:4932
"Saccharomyces cerevisiae" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;TAS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
[GO:0006412 "translation" evidence=IEA] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 SGD:S000003103
Prosite:PS01199 EMBL:BK006941 GO:GO:0003723 GO:GO:0003735
GO:GO:0002181 SUPFAM:SSF56808 EMBL:X92670 RefSeq:NP_011380.3
GeneID:852742 KEGG:sce:YGL135W KO:K02865 GO:GO:0022625 KO:K00987
RefSeq:NP_011385.3 GeneID:852747 KEGG:sce:YGL130W
Gene3D:3.30.190.20 Gene3D:3.40.50.790 InterPro:IPR023673
GeneTree:ENSGT00390000008767 PIR:S53893 RefSeq:NP_015104.1
EnsemblFungi:YGL135W EnsemblFungi:YPL220W GeneID:855881
KEGG:sce:YPL220W NextBio:972159 EMBL:X70986 EMBL:Z72657
ProteinModelPortal:P0CX44 SMR:P0CX44 CYGD:YGL135w
ArrayExpress:P0CX44 GermOnline:YGL135W Uniprot:P0CX44
Length = 217
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 114/216 (52%), Positives = 151/216 (69%)
Query: 45 SKLSSEVLREAVSTICGDAKE-KNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
SK++S +RE V + + E K RNF+ET+ELQ+GLKNYDPQ+DKRFSGS+KLP+ PRP
Sbjct: 2 SKITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
M +C+ GDA V++A+ G+D M V+ Y+AF+ASE +IKQ+P
Sbjct: 62 NMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
RLLGP L+KAGKFPT V+H + L KV + ++ +KFQLKKVLC+ VAVGN MEE +
Sbjct: 122 RLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMEEDVLVN 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ +SVNF VSLLKK+WQNV L +KS+MG R+Y
Sbjct: 182 QILMSVNFFVSLLKKNWQNVGSLVVKSSMGPAFRLY 217
>UNIPROTKB|Q6EE62 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 SUPFAM:SSF56808 GO:GO:0022625 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 OMA:MSICILG GeneTree:ENSGT00390000008767
HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:AC140943 EMBL:AY389961
IPI:IPI00596886 UniGene:Gga.4632 STRING:Q6EE62
Ensembl:ENSGALT00000004168 InParanoid:Q6EE62 Uniprot:Q6EE62
Length = 184
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 102/183 (55%), Positives = 132/183 (72%)
Query: 54 EAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDA 113
EAV + +K K R FVET+ELQI LKNYDPQKDKRFSG+V+L PRP VC+LGD
Sbjct: 2 EAVKEVLQGSKTKKRKFVETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCLLGDQ 61
Query: 114 QHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPRLLGPGLNKA 173
QH ++A+ + + +MD+E Y AFLASE++IKQIPR+LGPGLNKA
Sbjct: 62 QHCDEAKAVEIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKA 121
Query: 174 GKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLV 233
GKFP+L+TH E+L AKV+E K+ +KFQ+KKVLC+ VAVG+ M E ++ N+ L++NFLV
Sbjct: 122 GKFPSLLTHNENLVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTEDELVYNIHLAINFLV 181
Query: 234 SLL 236
SLL
Sbjct: 182 SLL 184
>UNIPROTKB|J9P122 [details] [associations]
symbol:J9P122 "Ribosomal protein" species:9615 "Canis lupus
familiaris" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 GeneTree:ENSGT00390000008767
EMBL:AAEX03003165 Ensembl:ENSCAFT00000029650 Uniprot:J9P122
Length = 207
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 108/216 (50%), Positives = 149/216 (68%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L E V + + K+R F+E +ELQI LKNYDPQ+DK FSG+V+L PRP
Sbjct: 2 SSKVSHDTLYEVVREVPHGNQCKHRKFLEMVELQISLKNYDPQQDKCFSGTVRLKS-PRP 60
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
+ QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 61 KFQ-------QHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAK-YDAFLASESLIKQIP 112
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
+LGPGLNKAGKFP+L+TH E++ KV+E K+ +KFQ+K VLC+ VAVG+ M ++
Sbjct: 113 -ILGPGLNKAGKFPSLLTHNENMVGKVDEVKSTIKFQMKTVLCLAVAVGHVKMTGDELVY 171
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 172 NIHLTVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 207
>RGD|1562962 [details] [associations]
symbol:RGD1562962 "similar to ribosomal protein L10a"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 RGD:1562962 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 OrthoDB:EOG4HQDKC
IPI:IPI00361962 PRIDE:D3Z9F6 Ensembl:ENSRNOT00000045023
Uniprot:D3Z9F6
Length = 217
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 99/207 (47%), Positives = 142/207 (68%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L +AV + + K F++ +ELQI LKNY PQKDKRFSG+++L P
Sbjct: 2 SSKVSRDTLYKAVQEVLYGNRCKRCKFLDMVELQISLKNYHPQKDKRFSGTIRLKSTPCS 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC+LGD QH ++A+ + + MD+E Y FLASE++IKQIP
Sbjct: 62 KFSVCVLGDQQHCDEAKAVDIPAMDIEALKKLNKNKKLVKKLAKKYDVFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQ 223
R+LGPGLNK GKFP+L+TH E++ AKV++ K+ +KFQ+KKVL + VAVG+ +M ++
Sbjct: 122 RILGPGLNKVGKFPSLLTHNENMVAKVDKVKSTIKFQMKKVLRLAVAVGHVNMTNGELVY 181
Query: 224 NVQLSVNFLVSLLKKSWQNVRCLHLKS 250
N+ L+VNFLVSLLKK+WQN++ L++KS
Sbjct: 182 NIHLAVNFLVSLLKKNWQNLQALYIKS 208
>UNIPROTKB|F1RS60 [details] [associations]
symbol:F1RS60 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU639466
Ensembl:ENSSSCT00000012272 Uniprot:F1RS60
Length = 218
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 103/220 (46%), Positives = 143/220 (65%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S L EAV + + K F+E ELQI LKNYDPQKDK F G+++L P
Sbjct: 2 SSKVSGNTLYEAVWEVLDGNQCK---FLEMAELQISLKNYDPQKDKGFWGTIRLKSTLHP 58
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
+ +LGD QH ++A+ + + +MD+E AFLASE++IKQIP
Sbjct: 59 KFSMYILGDQQHCDEAKAVDILHMDIEALKKLNKNKKLVKKLAKKCDAFLASESLIKQIP 118
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVV----KFQLKKVLCMGVAVGNCSMEEK 219
R+L GLNKAGKFP+L+TH E + AKV+E K+ + FQ+KKVLC+ VAVG+ M +
Sbjct: 119 RILDRGLNKAGKFPSLLTHSEKMVAKVDEVKSKIIDKIMFQMKKVLCLAVAVGHVKMIDD 178
Query: 220 QVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
++ N+ L+VNF VSLLKK+WQN+ L++KSTMG+PQ +Y
Sbjct: 179 ELVYNIHLAVNFPVSLLKKNWQNLWALYIKSTMGKPQCLY 218
>FB|FBgn0038281 [details] [associations]
symbol:RpL10Aa "Ribosomal protein L10Aa" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 EMBL:AE014297
GO:GO:0006911 GO:GO:0022008 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 KO:K02865
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AY113239 RefSeq:NP_650410.1
UniGene:Dm.13335 SMR:Q9VFE0 STRING:Q9VFE0
EnsemblMetazoa:FBtr0083024 GeneID:41811 KEGG:dme:Dmel_CG3843
UCSC:CG3843-RA CTD:41811 FlyBase:FBgn0038281 InParanoid:Q9VFE0
OrthoDB:EOG476HGD ChiTaRS:RpL10Aa GenomeRNAi:41811 NextBio:825679
Uniprot:Q9VFE0
Length = 216
Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 96/215 (44%), Positives = 141/215 (65%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
SK+S + + AV I +++ K + +ET+ELQIGL++YDP K KRF GSV L H+ P
Sbjct: 3 SKVSRDTIYVAVKNILLNSQAKGPDCLETVELQIGLRDYDPDKCKRFHGSVLLHHLAVPQ 62
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
+KVC+ GD +H +A+ IG+D +DVE Y FLASE++IKQIPR
Sbjct: 63 LKVCVFGDQEHCYKAKAIGVDCLDVEALKKLNKDPKLTKKLSKAYDVFLASESIIKQIPR 122
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
LLGPGL AGKF T + ES+ +K+ + + K +K++ C+ V VG+ M +++ +N
Sbjct: 123 LLGPGLTNAGKFLTPLARGESMSSKI-KILSTKKKHMKRMECLSVNVGHVGMHPEELARN 181
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ +S+NFLVSLLK +WQNVR LH+KS++G P ++Y
Sbjct: 182 IAISINFLVSLLKDNWQNVRSLHIKSSLGVPHQLY 216
>UNIPROTKB|F1RYZ5 [details] [associations]
symbol:RPL10A "Ribosomal protein" species:9823 "Sus scrofa"
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR002143 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 GO:GO:0015934
SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 GeneTree:ENSGT00390000008767 EMBL:CU467978
Ensembl:ENSSSCT00000001720 OMA:THRRTNA ArrayExpress:F1RYZ5
Uniprot:F1RYZ5
Length = 176
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 87/160 (54%), Positives = 119/160 (74%)
Query: 100 IPRPMMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVI 159
+P P VC+LGD QH ++A+ + + +MD+E Y AFLASE++I
Sbjct: 18 LPAPF-SVCVLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLI 76
Query: 160 KQIPRLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEK 219
KQIPR+LGPGLNKAGKFP+L+TH E++ AKV+E K+ +KFQ+KKVLC+ VAVG+ M +
Sbjct: 77 KQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDD 136
Query: 220 QVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
++ N+ L+VNFLVSLLKK+WQNVR L++KSTMG+PQR+Y
Sbjct: 137 ELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 176
>UNIPROTKB|F1M8D2 [details] [associations]
symbol:F1M8D2 "Ribosomal protein" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015934 "large ribosomal subunit"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 IPI:IPI00569398
Ensembl:ENSRNOT00000041472 Uniprot:F1M8D2
Length = 186
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 88/171 (51%), Positives = 121/171 (70%)
Query: 69 NFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYMD 128
+F +ELQI LKNYD QKDK FSG+V+L P P VC+LGD QH ++A+ + + +MD
Sbjct: 16 SFWRPLELQISLKNYDSQKDKHFSGTVRLKSTPHPKFSVCILGDQQHWDEAKAVDIPHMD 75
Query: 129 VEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLEA 188
+E Y AFLASE++IKQIPR+LGPGLNKAGKFP+L+TH E++ A
Sbjct: 76 IEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVA 135
Query: 189 KVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKS 239
KV+E K+ ++FQ++KVLC+ VAVG+ M + ++ N+ L+VNFL SLLKK+
Sbjct: 136 KVDEVKSAIEFQMRKVLCLAVAVGHVKMTDDELVYNIHLAVNFLASLLKKN 186
>UNIPROTKB|P53027 [details] [associations]
symbol:RPL10A "60S ribosomal protein L10a" species:9823
"Sus scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081
HOGENOM:HOG000207014 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOVERGEN:HBG055239 OrthoDB:EOG4HQDKC EMBL:F14821
STRING:P53027 PRIDE:P53027 Uniprot:P53027
Length = 165
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/164 (51%), Positives = 112/164 (68%)
Query: 44 NSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 103
+SK+S + L EAV + + F+ET+ELQI LKNYDPQKDKRFSG+V+L PRP
Sbjct: 2 SSKVSRDTLYEAVREVLHGNQRNXXKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRP 61
Query: 104 MMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIP 163
VC LGD QH ++A+ + + +MD+E Y AFLASE++IKQIP
Sbjct: 62 KFSVCXLGDQQHCDEAKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIP 121
Query: 164 RLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCM 207
R+LGPGLNKAGKFP+L+TH + AKV+E K+ VKFQ+K+VLC+
Sbjct: 122 RILGPGLNKAGKFPSLLTHNXDMVAKVDEVKSRVKFQMKEVLCL 165
>UNIPROTKB|F1SCR8 [details] [associations]
symbol:F1SCR8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU856159 EMBL:CU928236
Ensembl:ENSSSCT00000009433 Ensembl:ENSSSCT00000029814
Uniprot:F1SCR8
Length = 208
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 96/215 (44%), Positives = 133/215 (61%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPM 104
S +SS L+E VS I + F++ ELQI LKN DPQK KRF G++ L P P
Sbjct: 1 SVISSPALQEEVSEILRGREIYVSYFLKYRELQISLKNCDPQKGKRF-GTISLKSTP-PQ 58
Query: 105 MKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPR 164
VC+LGD Q ++A + ++D+E Y AFLASE++ KQIP+
Sbjct: 59 FSVCVLGDQQQCDEANPMESPHVDIEAPKKLYKNKTLAKKLAKKYDAFLASESLSKQIPQ 118
Query: 165 LLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQN 224
+ PG NKAGK P+L+T ++ AKV+E K+++KFQ+KK+LC+ VA G+ M V+ N
Sbjct: 119 IQDPGRNKAGKSPSLLTLNKNSMAKVDEVKSMIKFQMKKLLCLAVAAGHMKMT---VY-N 174
Query: 225 VQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
L+VNFLVSLLK +WQNV L++KS MG+ Q +Y
Sbjct: 175 THLAVNFLVSLLK-NWQNVWALYIKSAMGKSQCLY 208
>UNIPROTKB|I3LES0 [details] [associations]
symbol:I3LES0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:CU019576
Ensembl:ENSSSCT00000010689 Uniprot:I3LES0
Length = 194
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 80/200 (40%), Positives = 119/200 (59%)
Query: 54 EAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDA 113
EAV + + K + +E +ELQ LKNYDPQKDK G+++L P P VC+L D
Sbjct: 2 EAVWEVLHGNQCKCQKLLEKVELQFTLKNYDPQKDKHILGTIRLKSTPCPKFSVCVL-DG 60
Query: 114 QHVEQAEKIGMDYMDVEXXXXXXXXXXXX---XXXXXXYHAFLASEAVIKQIPRLLGPGL 170
++A+ + + +MD+E Y F V Q+ +LGPGL
Sbjct: 61 ---DEAKALDIPHMDIEALKKLNRNKKVVKKLAKLSKKYDGFFGFR-VSNQVNPILGPGL 116
Query: 171 NKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVN 230
NK GKFP L+TH +++ A+++E K+++KFQ+KK+LC+ VAV N M + ++ L+VN
Sbjct: 117 NKPGKFPFLLTHNKTMMAQIDEVKSMIKFQMKKLLCLAVAVSNMKMTDDD---SIHLAVN 173
Query: 231 FLVSLLKKSWQNVRCLHLKS 250
FLVSLLKK+WQN+R L++ S
Sbjct: 174 FLVSLLKKNWQNIRALYINS 193
>UNIPROTKB|J9P1H7 [details] [associations]
symbol:J9P1H7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AAEX03015434
Ensembl:ENSCAFT00000013375 OMA:THNENIV Uniprot:J9P1H7
Length = 173
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 80/182 (43%), Positives = 118/182 (64%)
Query: 78 IGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXX 137
I LK YD K SG L +P ++ + +LGD QH ++A+ + + +MD++
Sbjct: 1 ISLKKYDAVKAP--SG---LSLLPAQVLHM-VLGDWQHCDEAKVVDIPHMDIKVLKKLNK 54
Query: 138 XXXXXXXXXXXYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVV 197
Y AFLASE++IKQ P++L PGLNKAGKFP+L+TH E++ AKV+E K+ +
Sbjct: 55 NKKKELAKKY-YDAFLASESLIKQ-PQILDPGLNKAGKFPSLLTHSENMVAKVDEVKSTI 112
Query: 198 KFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQR 257
KFQ+K +LC+ VA+G M + ++ N+ L+VNFLVSLLK +WQN+ L +KSTMG Q
Sbjct: 113 KFQMKNMLCLAVAIGPMKMTDDELVYNIHLAVNFLVSLLK-NWQNIWALDIKSTMGNSQH 171
Query: 258 IY 259
++
Sbjct: 172 LH 173
>UNIPROTKB|F1Q2K0 [details] [associations]
symbol:LOC486972 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0015934 "large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 EMBL:AAEX03015831
Ensembl:ENSCAFT00000027506 OMA:NWHYLNI Uniprot:F1Q2K0
Length = 193
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 72/163 (44%), Positives = 106/163 (65%)
Query: 76 LQIGLKNYDPQKDKRFSGSVKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXX 135
LQI L+N D Q D+RFSG+++L PR +C+LGD QH ++A+ + + M+ E
Sbjct: 12 LQISLQNSDSQTDRRFSGTIRLKFTPRLKFSICVLGDQQHCDEAKAVVIPRMNTEALKKL 71
Query: 136 XXXXXXXXXXXXXYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLEAKVNETKA 195
+ AFLA E+++ QI LGP LNKAGKFP+ TH +++ AK+++ K
Sbjct: 72 NKNKKLFKKLAKKFDAFLALESLVLQI---LGPDLNKAGKFPSSKTHVKNIVAKMDDVKF 128
Query: 196 VVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLVSLLKK 238
++K Q+KKVLC+ VAVG+ M + ++ N+QL+VNFLVSLLKK
Sbjct: 129 MIKLQIKKVLCLPVAVGHVKMTDDELVYNIQLAVNFLVSLLKK 171
>UNIPROTKB|F1RX79 [details] [associations]
symbol:F1RX79 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015934 "large ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 Gene3D:3.40.50.790
GeneTree:ENSGT00390000008767 Ensembl:ENSSSCT00000017239 OMA:IHNENIV
Uniprot:F1RX79
Length = 170
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 68/161 (42%), Positives = 100/161 (62%)
Query: 100 IPRPMMKVCML-GDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAV 158
+P P CM GD QH +A+ + + +MD+E Y+ FL SE++
Sbjct: 18 LPAPS---CMCSGDQQHHAEAKPVDIPHMDIEALKKHNEIKKLVKKLAKKYYVFLVSESL 74
Query: 159 IKQIPRLLGPGLNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEE 218
I QIP L NK GKF +L+ H E++ AKV+E K+ +KFQ++KVLC+ VAVG+ M +
Sbjct: 75 IHQIPCL-----NKVGKFLSLLIHNENIVAKVDEVKSSIKFQMQKVLCLAVAVGHVKMTD 129
Query: 219 KQVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
++ N L+VNFL+SL KK+W N++ L++KSTMG+PQ Y
Sbjct: 130 DELGYNTHLAVNFLMSLFKKNWPNIQALYIKSTMGKPQHPY 170
>TAIR|locus:2041554 [details] [associations]
symbol:AT2G42650 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006412 "translation" evidence=IEA] [GO:0015934
"large ribosomal subunit" evidence=IEA] InterPro:IPR002143
InterPro:IPR016094 InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 EMBL:AC007087
GO:GO:0015934 SUPFAM:SSF56808 Gene3D:3.30.190.20 KO:K14775
EMBL:AY954832 IPI:IPI00543256 PIR:E84856 RefSeq:NP_181793.1
UniGene:At.36987 ProteinModelPortal:Q8S8D2 SMR:Q8S8D2 PRIDE:Q8S8D2
EnsemblPlants:AT2G42650.1 GeneID:818865 KEGG:ath:AT2G42650
TAIR:At2g42650 InParanoid:Q8S8D2 OMA:AELCLIV PhylomeDB:Q8S8D2
ProtClustDB:CLSN2683932 Genevestigator:Q8S8D2 Uniprot:Q8S8D2
Length = 372
Score = 125 (49.1 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 26/102 (25%), Positives = 50/102 (49%)
Query: 149 YHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQE-SLEAKVNETKAVVKFQLKKVLCM 207
Y F + VI +P+L+G ++ K P + + + + ++ + F ++ C
Sbjct: 128 YDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFMRTGSCS 187
Query: 208 GVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKSWQNVRCLHLK 249
+ V SME + +NV ++N +V +L W+ +R LHLK
Sbjct: 188 AIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLK 229
Score = 48 (22.0 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 17/68 (25%), Positives = 37/68 (54%)
Query: 45 SKLSSEVLREAVSTICGDAKEKNRNFV-ETIE------LQIGLKNYDPQKDKRFSGSVKL 97
S++S + + +AV + + EK+R + +E L + LK PQ++ F+ + ++
Sbjct: 2 SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKI-PQRN--FTNAYRI 58
Query: 98 PHIPRPMM 105
P +P P++
Sbjct: 59 P-LPHPLI 65
>TAIR|locus:2098979 [details] [associations]
symbol:AT3G58660 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015934 "large ribosomal subunit" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR002143 InterPro:IPR016094
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0003723 GO:GO:0003735 GO:GO:0015934 SUPFAM:SSF56808
EMBL:AL353032 Gene3D:3.30.190.20 eggNOG:NOG247516 KO:K14775
OMA:IEKACGS ProtClustDB:CLSN2683932 EMBL:AY070404 IPI:IPI00521804
PIR:T49149 RefSeq:NP_191425.1 ProteinModelPortal:Q9LXT5 SMR:Q9LXT5
STRING:Q9LXT5 PaxDb:Q9LXT5 PRIDE:Q9LXT5 EnsemblPlants:AT3G58660.1
GeneID:825035 KEGG:ath:AT3G58660 TAIR:At3g58660
HOGENOM:HOG000091059 InParanoid:Q9LXT5 PhylomeDB:Q9LXT5
ArrayExpress:Q9LXT5 Genevestigator:Q9LXT5 Uniprot:Q9LXT5
Length = 446
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 30/112 (26%), Positives = 50/112 (44%)
Query: 149 YHAFLASEAVIKQIPRLLGPGLNKAGKFPT-LVTHQESLEAKVNETKAVVKFQLKKVLCM 207
Y F +I +PR++G + K P L + + ++ + F ++ C
Sbjct: 148 YDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFFIRTGTCS 207
Query: 208 GVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKSWQNVRCLHLKSTMGRPQRIY 259
+ VG SM+ ++ +NV ++N LV L W VR LHLK + IY
Sbjct: 208 VIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESLALPIY 259
>TAIR|locus:2041519 [details] [associations]
symbol:AT2G42710 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA;ISS] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=RCA] InterPro:IPR002143
InterPro:IPR005878 InterPro:IPR016094 InterPro:IPR016095
InterPro:IPR023674 Pfam:PF00687 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0015934 SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
HSSP:P27150 EMBL:AY091124 EMBL:AY113995 EMBL:AK118309
IPI:IPI00522914 RefSeq:NP_850375.1 UniGene:At.36979
ProteinModelPortal:Q8RWT4 SMR:Q8RWT4 STRING:Q8RWT4 PaxDb:Q8RWT4
PRIDE:Q8RWT4 EnsemblPlants:AT2G42710.1 GeneID:818871
KEGG:ath:AT2G42710 TAIR:At2g42710 InParanoid:Q8RWT4 OMA:KYAGYVN
PhylomeDB:Q8RWT4 ProtClustDB:CLSN2680207 Genevestigator:Q8RWT4
Uniprot:Q8RWT4
Length = 415
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 59/228 (25%), Positives = 95/228 (41%)
Query: 39 KSEIENSKLSSEVLREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQKDKRFSGSVKLP 98
K E+++ K L EA+ I G+AK K F ET+E + L + + G++ LP
Sbjct: 177 KPELKHGKKPIFDLMEAIREIKGNAKAK---FDETLEAHVRLGIEKGRSELIVRGTLALP 233
Query: 99 HIPRPMMKVCMLGDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAV 158
H + +KV + E A+ G D + + LA+
Sbjct: 234 HSVKKDVKVAFFAEGADAEDAKAAGADVVG-----GLELIEEILKSGKIDFDRCLATP-- 286
Query: 159 IKQIPRL--LGPGLNKAGKFPTLVTHQ--ESLEAKVNETKAV-VKFQLKKVLCMGVAVGN 213
K +PR+ + LN G P + + V + KA KF++ K + V +G
Sbjct: 287 -KMMPRVYKISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGK 345
Query: 214 CSMEEKQVFQNVQLSVNFLVSL----LKKSWQN---VRCLHLKSTMGR 254
S E+ + +NV +N L+ LKK+ + V HL STMG+
Sbjct: 346 MSFSEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGK 393
>TIGR_CMR|CBU_0227 [details] [associations]
symbol:CBU_0227 "ribosomal protein L1" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 OMA:YVTSTMG ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:NP_819271.1 ProteinModelPortal:Q83ET3 SMR:Q83ET3
GeneID:1208108 KEGG:cbu:CBU_0227 PATRIC:17929145
BioCyc:CBUR227377:GJ7S-233-MONOMER Uniprot:Q83ET3
Length = 232
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 52 LREAVSTICGDAKEKNRNFVETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPMMKVCML 110
L EA+ I AK K F E+I++ I L D +K D+ G+ LPH +KV +
Sbjct: 24 LSEAIKLIKECAKAK---FNESIDVAINL-GIDSRKSDQAIRGATVLPHGSGRTVKVAVF 79
Query: 111 GDAQHVEQAEKIGMDYMDVEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPRLLGP-G 169
+VE+A+ G D + ++ A + V+ ++ ++LGP G
Sbjct: 80 AQGDNVEKAKAAGADIVGLDDLAERIQGGDIDFDVVI---ATPETMRVVGKLGQVLGPRG 136
Query: 170 LNKAGKFPTLVTHQESLEAKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSV 229
L K T+ T S A N + V+++ K + +G + EEK + +N +
Sbjct: 137 LMPNPKVGTVTTDVAS--AVKNAKQGQVRYRTDKNGIIHCTIGKVNFEEKALEENFLALL 194
Query: 230 NFLVSLLKKSWQN--VRCLHLKSTMG 253
N + + + ++ L L STMG
Sbjct: 195 NDIKKAKPSAAKGTYLKKLTLSSTMG 220
>UNIPROTKB|Q06797 [details] [associations]
symbol:rplA "50S ribosomal protein L1" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
GO:GO:0006412 GO:GO:0003735 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 TIGRFAMs:TIGR01169
KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B EMBL:D13303
EMBL:D50303 PIR:E69694 RefSeq:NP_387984.2 ProteinModelPortal:Q06797
SMR:Q06797 EnsemblBacteria:EBBACT00000001732 GeneID:936843
KEGG:bsu:BSU01030 PATRIC:18971715 GenoList:BSU01030
BioCyc:BSUB:BSU01030-MONOMER Uniprot:Q06797
Length = 232
Score = 109 (43.4 bits), Expect = 0.00043, P = 0.00043
Identities = 55/224 (24%), Positives = 99/224 (44%)
Query: 37 KDKSEIENSKLSSEVLREAVSTICGDAKEKNR-NFVETIELQIGLKNYDPQK-DKRFSGS 94
K K +E +KL VS K+ N F T+E+ L DP+K D++ G+
Sbjct: 4 KGKKYVEAAKLVDRSKAYDVSEAVALVKKTNTAKFDATVEVAFRL-GVDPRKNDQQIRGA 62
Query: 95 VKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYM-DVEXXXXXXXXXXXXXXXXXXYHAFL 153
V LP+ +V + + ++AE G D++ D + +
Sbjct: 63 VVLPNGTGKTQRVLVFAKGEKAKEAEAAGADFVGDTDYINKIQQGWFDFDVIVATPD--M 120
Query: 154 ASEAVIKQIPRLLGP-GLNKAGKFPTLVTHQESLEAKVNETKA-VVKFQLKKVLCMGVAV 211
E + +I R+LGP GL K T VT + +E + E KA V++++ K + V +
Sbjct: 121 MGE--VGKIGRVLGPKGLMPNPKTGT-VTFE--VEKAIGEIKAGKVEYRVDKAGNIHVPI 175
Query: 212 GNCSMEEKQVFQNVQLSVNFLVSLLKKSWQNV--RCLHLKSTMG 253
G S E++++ +N + ++ + + V + + + STMG
Sbjct: 176 GKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKNVAVTSTMG 219
>TIGR_CMR|BA_0098 [details] [associations]
symbol:BA_0098 "ribosomal protein L1" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR002143 InterPro:IPR005878 InterPro:IPR016094
InterPro:IPR016095 InterPro:IPR023674 Pfam:PF00687
PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0000049 GO:GO:0019843 GO:GO:0015934
SUPFAM:SSF56808 eggNOG:COG0081 Gene3D:3.30.190.20
Gene3D:3.40.50.790 InterPro:IPR023673 HOGENOM:HOG000207015
OMA:AKGRYVK TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424
HAMAP:MF_01318_B RefSeq:NP_842666.1 RefSeq:YP_016701.1
RefSeq:YP_026384.1 ProteinModelPortal:Q81VU2 SMR:Q81VU2
DNASU:1087066 EnsemblBacteria:EBBACT00000011718
EnsemblBacteria:EBBACT00000017677 EnsemblBacteria:EBBACT00000020059
GeneID:1087066 GeneID:2814891 GeneID:2848851 KEGG:ban:BA_0098
KEGG:bar:GBAA_0098 KEGG:bat:BAS0098
BioCyc:BANT260799:GJAJ-109-MONOMER
BioCyc:BANT261594:GJ7F-111-MONOMER Uniprot:Q81VU2
Length = 230
Score = 107 (42.7 bits), Expect = 0.00072, P = 0.00072
Identities = 54/229 (23%), Positives = 100/229 (43%)
Query: 37 KDKSEIENSKLSSEVLREAVSTICGDAKEKNR-NFVETIELQIGLKNYDPQK-DKRFSGS 94
+ K +E +KL + + K+ N F T+E L DP+K D++ G+
Sbjct: 4 RGKKYVEAAKLVDRAAAYSATEAVELVKKTNTAKFDATVEAAFRL-GVDPKKADQQIRGA 62
Query: 95 VKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYM-DVEXXXXXXXXXXXXXXXXXXYHAFL 153
V LPH + +V + + ++AE G D++ D + +
Sbjct: 63 VVLPHGTGKVQRVLVFAKGEKAKEAEAAGADFVGDADYIGKIQQGWFDFDVVVATPD--M 120
Query: 154 ASEAVIKQIPRLLGP-GLNKAGKFPTLVTHQESLEAKVNETKA-VVKFQLKKVLCMGVAV 211
E + ++ R+LGP GL K T VT + VNE KA V++++ K + V +
Sbjct: 121 MGE--VGKLGRVLGPKGLMPNPKTGT-VTFD--VTKAVNEIKAGKVEYRVDKAGNIHVPI 175
Query: 212 GNCSMEEKQVFQNVQLSVNFLVSLLKKSWQN--VRCLHLKSTMGRPQRI 258
G S E+ ++ +N + + L + + + ++ + + STMG R+
Sbjct: 176 GKVSFEDAKLVENFRTIADTLQKVKPAAAKGTYMKNVTVASTMGPGVRV 224
>TIGR_CMR|CHY_2322 [details] [associations]
symbol:CHY_2322 "ribosomal protein L1" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR002143 InterPro:IPR005878
InterPro:IPR016094 InterPro:IPR016095 InterPro:IPR023674
Pfam:PF00687 PIRSF:PIRSF002155 Prosite:PS01199 GO:GO:0006417
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0000049 GO:GO:0019843 GO:GO:0015934 SUPFAM:SSF56808
eggNOG:COG0081 Gene3D:3.30.190.20 Gene3D:3.40.50.790
InterPro:IPR023673 HOGENOM:HOG000207015 OMA:AKGRYVK
TIGRFAMs:TIGR01169 KO:K02863 ProtClustDB:PRK05424 HAMAP:MF_01318_B
RefSeq:YP_361131.1 ProteinModelPortal:Q3A9Q3 SMR:Q3A9Q3
STRING:Q3A9Q3 GeneID:3728765 KEGG:chy:CHY_2322 PATRIC:21277711
BioCyc:CHYD246194:GJCN-2321-MONOMER Uniprot:Q3A9Q3
Length = 231
Score = 107 (42.7 bits), Expect = 0.00073, P = 0.00073
Identities = 41/188 (21%), Positives = 82/188 (43%)
Query: 70 FVETIELQIGLKNYDPQK-DKRFSGSVKLPHIPRPMMKVCMLGDAQHVEQAEKIGMDYMD 128
F ET+E+ + L DP+ D++ G+V LPH KV + + ++AE G DY+
Sbjct: 38 FDETVEVAVKL-GVDPRHADQQVRGAVVLPHGTGKTRKVLVFAKGEKAKEAEAAGADYVG 96
Query: 129 VEXXXXXXXXXXXXXXXXXXYHAFLASEAVIKQIPRLLGP-GLNKAGKFPTLVTHQESLE 187
E + + + ++ ++LGP GL + K T+
Sbjct: 97 AEEYIEKIAQGWIDFDVVVATPDMMGA---VGRLGKILGPKGLMPSPKTGTVTFEVAKAI 153
Query: 188 AKVNETKAVVKFQLKKVLCMGVAVGNCSMEEKQVFQNVQLSVNFLVSLLKKS--WQNVRC 245
A++ K +++++ K + V +G S +++ +N ++ L+ Q ++
Sbjct: 154 AEIKAGK--IEYRVDKAGIVHVPIGKVSFPVEKLVENFNTLMDALIKAKPAGAKGQYLKG 211
Query: 246 LHLKSTMG 253
+ + STMG
Sbjct: 212 VTVSSTMG 219
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.383 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 259 231 0.00084 113 3 11 22 0.41 33
32 0.42 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 606 (64 KB)
Total size of DFA: 178 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.92u 0.11s 19.03t Elapsed: 00:00:01
Total cpu time: 18.93u 0.11s 19.04t Elapsed: 00:00:01
Start: Sat May 11 06:19:47 2013 End: Sat May 11 06:19:48 2013