BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036237
(689 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 298/721 (41%), Positives = 439/721 (60%), Gaps = 48/721 (6%)
Query: 11 PIHALQQHLPSRLHWNILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYV-DPHIN 69
P +++ H PS ++L T + + +HA +K L + S+L+ + PH
Sbjct: 27 PYDSIRNH-PS---LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFE 82
Query: 70 NLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVI 129
L YA S+F + +Q P+L+++N + + + + AL L+ ++ LLP+++T P V+
Sbjct: 83 GLPYAISVF-KTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL 141
Query: 130 KGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLV 189
K A+ A KEG+QIHG V KLG D +V +SL+SMY + G ++ +VFD +D+V
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV 201
Query: 190 SWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRM---- 245
S+ LI GY +G +E A KLFDE+P +D+ SW ++ G+++ G + A E+F M
Sbjct: 202 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 261
Query: 246 --PNR---------------------------------NLVSWNAMINGYMKAGDVDSAC 270
P+ NL NA+I+ Y K G++++AC
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 271 ELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLA 330
LF+ + +D+I+WN++I GY + EAL L + ML PND T++S L A A L
Sbjct: 322 GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 381
Query: 331 VLNKGRWMHSYIVK--NGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAM 388
++ GRW+H YI K G L T LI MY+KCG IE+A VF +I K + W AM
Sbjct: 382 AIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 389 IVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYG 448
I G MHG A + DLF++M ++G++P ITF+G+L+ACSH+G+++ GR F M DY
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 501
Query: 449 IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAA 508
+ P +EHYGC++D+L +G +EA+ I M M P+ VIW SLL + HGN ++GE A
Sbjct: 502 MTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFA 561
Query: 509 NNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEF 568
NLIK+ P+ G YV+LSNIYA+AG+W++V++ R ++ +G +K PG SSIE V+HEF
Sbjct: 562 ENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEF 621
Query: 569 VVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIA 628
++GDK HP+ EI+ L EM L+ AG VPDT++VL +E++ KE L +HSE+LAIA
Sbjct: 622 IIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEE-WKEGALRHHSEKLAIA 680
Query: 629 FGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDF 688
FGLI+ K + + IVKNLRVC +CH TKL+S IY REII RD +RFHHF++G CSC D+
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740
Query: 689 W 689
W
Sbjct: 741 W 741
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/722 (38%), Positives = 431/722 (59%), Gaps = 43/722 (5%)
Query: 9 SSPIHALQQHLPSRLHWNILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHI 68
S+P + SR H ++++ + ++ +Q H ++T +S+L ++
Sbjct: 19 SNPNQPTTNNERSR-HISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSF 77
Query: 69 NNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLL-DRFLLPDNFTLPC 127
+L YAR +FD I + P+ +N LI+ Y ++ F D++ + P+ +T P
Sbjct: 78 ASLEYARKVFDEIPK-PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPF 136
Query: 128 VIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKD 187
+IK AA + ++ G+ +HG+ K G D FV +SL+ Y G++D +VF + +KD
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 188 LVSWNCLIDGYVKKGEVEVAMKLFDEMPDRD----------------------------- 218
+VSWN +I+G+V+KG + A++LF +M D
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 219 ----------LFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDS 268
L ++D ++KCG +E A+ +F M ++ V+W M++GY + D ++
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 269 ACELFDDMEIRDLITWNSMIAGYELNGRFMEALELL-ETMLIGDVLPNDATLVSALSAVA 327
A E+ + M +D++ WN++I+ YE NG+ EAL + E L ++ N TLVS LSA A
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 328 GLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTA 387
+ L GRW+HSYI K+G ++ + + LI MYSKCG +E + VF ++ K+ V W+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 388 MIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDY 447
MI GL MHG +A+D+F KM +KP +TF V ACSH GLV++ F+ M ++Y
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNY 496
Query: 448 GIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYA 507
GI P +HY C+VD+L R+GYLE+A IE+MP+ P+ +W +LL + H N ++ E A
Sbjct: 497 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMA 556
Query: 508 ANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHE 567
L+++ P G +V+LSNIYA G+W+ VSE+R+ M+ G +K+PG SSIE G++HE
Sbjct: 557 CTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616
Query: 568 FVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAI 627
F+ GD +HP +++++ KL E+ KLK+ G+ P+ +QVL IE+++ KE L HSE+LAI
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAI 676
Query: 628 AFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKD 687
+GLI+ ++ IR++KNLRVC DCHSV KL+S +Y+REIIVRD RFHHF+NG CSC D
Sbjct: 677 CYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND 736
Query: 688 FW 689
FW
Sbjct: 737 FW 738
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/616 (41%), Positives = 375/616 (60%), Gaps = 10/616 (1%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
ARS+FDR+ + V +N L+ YV N + EA LF + L+ N C++ G
Sbjct: 176 ARSVFDRMPEKND-VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN----CLLGGFV 230
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
+ I E +Q F D +++++ YA+ G+ID R++FD +D+ +W
Sbjct: 231 KKKKIVEARQF----FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTA 286
Query: 194 LIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSW 253
++ GY++ VE A +LFD+MP+R+ SW ++ G+ + ++E+A+E+F MP RN+ +W
Sbjct: 287 MVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW 346
Query: 254 NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
N MI GY + G + A LFD M RD ++W +MIAGY +G EAL L M
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGR 406
Query: 314 PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTV 373
N ++ SALS A + L G+ +H +VK G+ +G L+ MY KCGSIE A +
Sbjct: 407 LNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 374 FRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLV 433
F+ ++ K + W MI G HG AL F M R G+KP T + VL+ACSH GLV
Sbjct: 467 FKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLV 526
Query: 434 NDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLS 493
+ GR+YF M DYG+ P +HY C+VD+L R G LE+A + +++MP P+ IW +LL
Sbjct: 527 DKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Query: 494 GARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKD 553
+R HGN ++ E AA+ + + P+ G YV+LSN+YA++G+W V ++R M+ +G +K
Sbjct: 587 ASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKV 646
Query: 554 PGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKE 613
PG S IE + H F VGD+ HP+ DEI + L E+ ++K AG+V T+ VL +E++ E
Sbjct: 647 PGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEE-E 705
Query: 614 KEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNS 673
KE + HSERLA+A+G++ V S PIR++KNLRVC DCH+ K ++ I R II+RDN+
Sbjct: 706 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNN 765
Query: 674 RFHHFKNGSCSCKDFW 689
RFHHFK+GSCSC D+W
Sbjct: 766 RFHHFKDGSCSCGDYW 781
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 204/437 (46%), Gaps = 62/437 (14%)
Query: 148 VFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVA 207
VFK + + ++S Y + GE +L R++FD M ++DLVSWN +I GYV+ + A
Sbjct: 86 VFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKA 145
Query: 208 MKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVD 267
+LF+ MP+RD+ SW ++ G+++ G V+ AR +F RMP +N VSWNA+++ Y++ ++
Sbjct: 146 RELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKME 205
Query: 268 SAC-------------------------------ELFDDMEIRDLITWNSMIAGYELNGR 296
AC + FD M +RD+++WN++I GY +G+
Sbjct: 206 EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 297 FMEALELLETMLIGDVLPNDATLV---------------------SALSAVAGLAVLNKG 335
EA +L + + DV A + + +S A LA +G
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQG 325
Query: 336 RWMHSYIVKNGFVV----DGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVG 391
M + K F V + +I Y++CG I A +F + K+ W AMI G
Sbjct: 326 ERME--MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 392 LGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEP 451
G + +AL LF +M R G + +F L+ C+ + G++ ++ G E
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG-GYET 442
Query: 452 TIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNL 511
L+ + C+ G +EEA + M + + V W ++++G HG ++ ++
Sbjct: 443 GCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESM 501
Query: 512 IK--VAPDTIGCYVVLS 526
+ + PD VLS
Sbjct: 502 KREGLKPDDATMVAVLS 518
Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 169/340 (49%), Gaps = 26/340 (7%)
Query: 164 VSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWT 223
+S Y + G + RVF M VS+N +I GY++ GE E+A KLFDEMP+RDL SW
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWN 130
Query: 224 CLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLIT 283
++ G+ + + ARE+F MP R++ SWN M++GY + G VD A +FD M ++ ++
Sbjct: 131 VMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVS 190
Query: 284 WNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLA----VLNKGRWMH 339
WN++++ Y N + EA L ++ + LVS + G ++ ++
Sbjct: 191 WNALLSAYVQNSKMEEACMLFKSR-------ENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 340 SYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMAT 399
S V+ D V +I Y++ G I+ A +F + V WTAM+ G + M
Sbjct: 244 SMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 400 QALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCL 459
+A +LF+KM + +++ +L AG V R + D + + +
Sbjct: 299 EARELFDKM----PERNEVSWNAML-----AGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 460 VDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHG 499
+ + G + EAK+ + MP R + V W ++++G G
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAGYSQSG 388
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/613 (42%), Positives = 370/613 (60%), Gaps = 61/613 (9%)
Query: 137 AIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFG----EIDLGRRVFDAMDDKDLVSWN 192
I++ QIH + K G D + ++ A ++D ++F+ M ++ SWN
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWN 94
Query: 193 CLIDGYVKKGEVE--VAMKLFDEM-------PDR-------------------------- 217
+I G+ + E + +A+ LF EM P+R
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 218 -------DLFSWTCLVDGFSKCGKVEIAREIFYR---------MPNR-----NLVSWNAM 256
D F + LV + CG ++ AR +FY+ M +R +V WN M
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVM 214
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPND 316
I+GYM+ GD +A LFD M R +++WN+MI+GY LNG F +A+E+ M GD+ PN
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNY 274
Query: 317 ATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRA 376
TLVS L A++ L L G W+H Y +G +D VLG+ LI MYSKCG IE A+ VF
Sbjct: 275 VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER 334
Query: 377 ISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDG 436
+ ++ V W+AMI G +HG A A+D F KM + G++P+ + +I +L ACSH GLV +G
Sbjct: 335 LPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 437 RRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGAR 496
RRYF+ M++ G+EP IEHYGC+VD+L R+G L+EA+ I +MP++P+ VIW +LL R
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 454
Query: 497 NHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGS 556
GN ++G+ AN L+ + P G YV LSN+YA+ G W +VSE+R MK++ RKDPG
Sbjct: 455 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 514
Query: 557 SSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEA 616
S I+ GVLHEFVV D SHP+ EI+S L E+ +KL+ AG+ P TTQVLL +E++ +KE
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEE-DKEN 573
Query: 617 ELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFH 676
L HSE++A AFGLI+ PIRIVKNLR+C DCHS KL+S +Y R+I VRD RFH
Sbjct: 574 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 633
Query: 677 HFKNGSCSCKDFW 689
HF++GSCSC D+W
Sbjct: 634 HFQDGSCSCMDYW 646
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 225/471 (47%), Gaps = 92/471 (19%)
Query: 33 THKETQQLHALSVKTNLIYHSGISSRLLSLYV--DPHINNLHYARSIFDRILQHPSLVLY 90
T ++ Q+HA+ +K+ + + ++ +L D H +L YA IF+++ Q + +
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR-NCFSW 93
Query: 91 NLLIKCYVFNQRSHE--ALTLFCDLL-DRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGL 147
N +I+ + + A+TLF +++ D F+ P+ FT P V+K A+ G I+EGKQIHGL
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 148 VFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVF--------------DAMDDKDLVSWNC 193
K GFG D+FV+S+LV MY G + R +F D ++V WN
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 194 LIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRM------PN 247
+IDGY++ G+ + A LFD+M R + SW ++ G+S G + A E+F M PN
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 248 R-NLVS---------------W-----------------NAMINGYMKAGDVDSACELFD 274
LVS W +A+I+ Y K G ++ A +F+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 275 DMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNK 334
+ ++ITW++MI G+ ++G+ +A++ M V P+D ++ L+A + ++ +
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 335 GRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGM 394
GR S +V VDG+ + ++ H+ M+ LG
Sbjct: 394 GRRYFSQMVS----VDGL--------------------------EPRIEHYGCMVDLLGR 423
Query: 395 HGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIN 445
G+ +A + + M +KP + + +L AC G V G+R N++++
Sbjct: 424 SGLLDEAEEF---ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/692 (38%), Positives = 405/692 (58%), Gaps = 45/692 (6%)
Query: 39 QLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYV 98
Q+H L VK + + L+ Y + L AR +FD + + ++V + +I Y
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAE--CGELDSARKVFDEMSER-NVVSWTSMICGYA 211
Query: 99 FNQRSHEALTLFCDLL-DRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ +A+ LF ++ D + P++ T+ CVI A+L ++ G++++ + G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM--- 214
++S+LV MY K ID+ +R+FD +L N + YV++G A+ +F+ M
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 215 ---PDR-----------------------------DLFSW----TCLVDGFSKCGKVEIA 238
PDR SW L+D + KC + + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 239 REIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFM 298
IF RM N+ +V+WN+++ GY++ G+VD+A E F+ M +++++WN++I+G F
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 299 EALELLETMLIGDVLPNDA-TLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLL 357
EA+E+ +M + + D T++S SA L L+ +W++ YI KNG +D LGT L
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 358 IQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTA 417
+ M+S+CG ESA+++F +++ + V WTA I + M G A +A++LF+ M G+KP
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDG 571
Query: 418 ITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIE 477
+ F+G L ACSH GLV G+ F M+ +G+ P HYGC+VD+L R G LEEA IE
Sbjct: 572 VAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE 631
Query: 478 SMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDK 537
MPM PN VIW SLL+ R GN ++ YAA + +AP+ G YV+LSN+YA+AG+W+
Sbjct: 632 DMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWND 691
Query: 538 VSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGH 597
+++VR MK++G RK PG+SSI+ RG HEF GD+SHP+ I + L E+ + GH
Sbjct: 692 MAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGH 751
Query: 598 VPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTK 657
VPD + VL+ + D+KEK L HSE+LA+A+GLI+ + IRIVKNLRVC+DCHS K
Sbjct: 752 VPDLSNVLMDV-DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAK 810
Query: 658 LLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
S +YNREII+RDN+RFH+ + G CSC DFW
Sbjct: 811 FASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 218/454 (48%), Gaps = 42/454 (9%)
Query: 70 NLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVI 129
+L +A+ +F+ + + +YN LI+ Y + +EA+ LF +++ + PD +T P +
Sbjct: 82 SLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 141
Query: 130 KGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLV 189
A+ A G QIHGL+ K+G+ D FV +SLV YA+ GE+D R+VFD M ++++V
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 190 SWNCLIDGYVKKGEVEVAMKLF-----DEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYR 244
SW +I GY ++ + A+ LF DE + + C++ +K +E +++
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 245 MPNR----NLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEA 300
+ N N + +A+++ YMK +D A LFD+ +L N+M + Y G EA
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA 321
Query: 301 LELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQM 360
L + M+ V P+ +++SA+S+ + L + G+ H Y+++NGF + LI M
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDM 381
Query: 361 YSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKM------------ 408
Y KC ++A +F +S K V W +++ G +G A + F M
Sbjct: 382 YMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTII 441
Query: 409 ----------------CRM----GMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYG 448
C M G+ +T + + +AC H G + D ++ I G
Sbjct: 442 SGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGAL-DLAKWIYYYIEKNG 500
Query: 449 IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMR 482
I+ + LVD+ R G E A S S+ R
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 181/405 (44%), Gaps = 54/405 (13%)
Query: 138 IKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFG---EIDLGRRVFDAMDD-KDLVSWNC 193
I E K H + K G D ++ LV+ + G + + VF+ + +N
Sbjct: 45 IDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNS 104
Query: 194 LIDGYVKKGEVEVAMKLFDEM------PDRDLFSWTCLVDGFSKCGK-------VEIARE 240
LI GY G A+ LF M PD+ F + G S C K ++I
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPF-----GLSACAKSRAKGNGIQIHGL 159
Query: 241 IFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEA 300
I ++L N++++ Y + G++DSA ++FD+M R++++W SMI GY +A
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 301 LELLETMLIGD-VLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQ 359
++L M+ + V PN T+V +SA A L L G ++++I +G V+ ++ + L+
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 360 MYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAIT 419
MY KC +I+ A +F + AM G+ +AL +FN M G++P I+
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 420 FIGVLNACS-----------HAGLVNDGRRYFNMMIN-------------------DYGI 449
+ +++CS H ++ +G ++ + N D
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 450 EPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSG 494
T+ + +V G ++ A T E+MP + N V W +++SG
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEK-NIVSWNTIISG 443
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 408/707 (57%), Gaps = 48/707 (6%)
Query: 28 LKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSL 87
L F + +QLHA ++T + + ++S L +L V NL YA ++F I P
Sbjct: 19 LSFCKSLNHIKQLHAHILRT--VINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPES 76
Query: 88 VLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGL 147
+++N ++ + + + + D F+ ++K +++ A+ EG ++HG+
Sbjct: 77 IVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGV 136
Query: 148 VFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVA 207
FK+ D FV + + MYA G I+ R VFD M +D+V+WN +I+ Y + G V+ A
Sbjct: 137 AFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEA 196
Query: 208 MKLFDEMPD--------------------------RDLFSW-------------TCLVDG 228
KLF+EM D R ++ + T LV
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 229 FSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMI 288
++ G +++ARE F +M RNL AM++GY K G +D A +FD E +DL+ W +MI
Sbjct: 257 YAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMI 316
Query: 289 AGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFV 348
+ Y + EAL + E M + P+ ++ S +SA A L +L+K +W+HS I NG
Sbjct: 317 SAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLE 376
Query: 349 VDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKM 408
+ + LI MY+KCG +++ VF + ++ V W++MI L MHG A+ AL LF +M
Sbjct: 377 SELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARM 436
Query: 409 CRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGY 468
+ ++P +TF+GVL CSH+GLV +G++ F M ++Y I P +EHYGC+VD+ R
Sbjct: 437 KQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANL 496
Query: 469 LEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNI 528
L EA IESMP+ N VIW SL+S R HG ++G++AA ++++ PD G V++SNI
Sbjct: 497 LREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNI 556
Query: 529 YAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEM 588
YA +W+ V +R +M+++ K+ G S I+ G HEF++GDK H Q++EI++KL E+
Sbjct: 557 YAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEV 616
Query: 589 RNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSP------IRI 642
+KLK AG+VPD VL+ +E++++K+ L HSE+LA+ FGL+N + IRI
Sbjct: 617 VSKLKLAGYVPDCGSVLVDVEEEEKKDLVLW-HSEKLALCFGLMNEEKEEEKDSCGVIRI 675
Query: 643 VKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
VKNLRVC DCH KL+S +Y REIIVRD +RFH +KNG CSC+D+W
Sbjct: 676 VKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/673 (38%), Positives = 404/673 (60%), Gaps = 22/673 (3%)
Query: 31 SSTHK-ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVL 89
S+THK + +Q+HA + L + + ++L+ + ++ +AR +FD L P +
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLI--HASSSFGDITFARQVFDD-LPRPQIFP 86
Query: 90 YNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVF 149
+N +I+ Y N +AL ++ ++ + PD+FT P ++K + L ++ G+ +H VF
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 150 KLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMD--DKDLVSWNCLIDGYVKKGEVEVA 207
+LGF D FV + L+++YAK + R VF+ + ++ +VSW ++ Y + GE A
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 208 MKLFDEMPDRDLFS-WTCLV---DGFSKCGKVEIAREIFYRMPNRNL-------VSWNAM 256
+++F +M D+ W LV + F+ ++ R I + L +S N M
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPND 316
Y K G V +A LFD M+ +LI WN+MI+GY NG EA+++ M+ DV P+
Sbjct: 267 ---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDT 323
Query: 317 ATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRA 376
++ SA+SA A + L + R M+ Y+ ++ + D + + LI M++KCGS+E A VF
Sbjct: 324 ISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 377 ISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDG 436
+ V W+AMIVG G+HG A +A+ L+ M R G+ P +TF+G+L AC+H+G+V +G
Sbjct: 384 TLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Query: 437 RRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGAR 496
+FN M D+ I P +HY C++D+L R G+L++A I+ MP++P +W +LLS +
Sbjct: 444 WWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACK 502
Query: 497 NHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGS 556
H + ++GEYAA L + P G YV LSN+YAAA WD+V+EVR MK++G KD G
Sbjct: 503 KHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGC 562
Query: 557 SSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEA 616
S +E RG L F VGDKSHP+ +EI ++ + ++LK G V + L + D+ E E
Sbjct: 563 SWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDE-EAEE 621
Query: 617 ELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFH 676
L +HSER+AIA+GLI+ +P+RI KNLR C +CH+ TKL+S + +REI+VRD +RFH
Sbjct: 622 TLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFH 681
Query: 677 HFKNGSCSCKDFW 689
HFK+G CSC D+W
Sbjct: 682 HFKDGVCSCGDYW 694
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 250/608 (41%), Positives = 354/608 (58%), Gaps = 46/608 (7%)
Query: 124 TLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDL---GRRVF 180
T+ C+ R +E KQIH + K G D + ++ +S D + VF
Sbjct: 17 TMSCL----QRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72
Query: 181 DAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM------------P------------- 215
D D D WN +I G+ E E ++ L+ M P
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 216 --------------DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYM 261
+ D+++ L++ ++ G ++A +F R+P + VSWN++I GY+
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 262 KAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVS 321
KAG +D A LF M ++ I+W +MI+GY EAL+L M DV P++ +L +
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 322 ALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKK 381
ALSA A L L +G+W+HSY+ K +D VLG +LI MY+KCG +E AL VF+ I KK
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 382 VGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFN 441
V WTA+I G HG +A+ F +M +MG+KP ITF VL ACS+ GLV +G+ F
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372
Query: 442 MMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNK 501
M DY ++PTIEHYGC+VD+L R G L+EAK I+ MP++PN VIW +LL R H N
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432
Query: 502 DIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEH 561
++GE LI + P G YV +NI+A +WDK +E R +MK++G K PG S+I
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492
Query: 562 RGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENH 621
G HEF+ GD+SHP+ ++I SK MR KL+ G+VP+ ++LL + D E+EA + H
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQH 552
Query: 622 SERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNG 681
SE+LAI +GLI K + IRI+KNLRVC DCH VTKL+S IY R+I++RD +RFHHF++G
Sbjct: 553 SEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDG 612
Query: 682 SCSCKDFW 689
CSC D+W
Sbjct: 613 KCSCGDYW 620
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 202/440 (45%), Gaps = 74/440 (16%)
Query: 28 LKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINN-LHYARSIFDRILQHPS 86
L+ S +E +Q+HA +KT L+ S ++ LS + ++ L YA+ +FD P
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG-FDRPD 79
Query: 87 LVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHG 146
L+NL+I+ + + +L L+ +L + +T P ++K + L A +E QIH
Sbjct: 80 TFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHA 139
Query: 147 LVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEV 206
+ KLG+ D + ++SL++ YA G L +FD + + D VSWN +I GYVK G++++
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199
Query: 207 AMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWN------------ 254
A+ LF +M +++ SWT ++ G+ + + A ++F+ M N ++ N
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQ 259
Query: 255 ---------------------------AMINGYMKAGDVDSACELFDDMEIRDLITWNSM 287
+I+ Y K G+++ A E+F +++ + + W ++
Sbjct: 260 LGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTAL 319
Query: 288 IAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGF 347
I+GY +G EA+ M + PN T + L+A + ++ +G+ + Y ++ +
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDY 378
Query: 348 VVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNK 407
+ K + H+ ++ LG G+ +A +
Sbjct: 379 NL-----------------------------KPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409
Query: 408 MCRMGMKPTAITFIGVLNAC 427
M +KP A+ + +L AC
Sbjct: 410 ---MPLKPNAVIWGALLKAC 426
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 464 bits (1194), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/625 (40%), Positives = 367/625 (58%), Gaps = 23/625 (3%)
Query: 87 LVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHG 146
LV +N ++ N++ EAL +++ + PD FT+ V+ + L ++ GK++H
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 147 LVFKLG-FGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVE 205
K G + FV S+LV MY ++ GRRVFD M D+ + WN +I GY + +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 206 VAMKLFDEMPDRD--LFSWTCLVDGFSKC-------GKVEIAREIFYRMPNRNLVSWNAM 256
A+ LF M + L + T + C K I + R +R+ N +
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTL 446
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGD----- 311
++ Y + G +D A +F ME RDL+TWN+MI GY + +AL LL M +
Sbjct: 447 MDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSK 506
Query: 312 ------VLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCG 365
+ PN TL++ L + A L+ L KG+ +H+Y +KN D +G+ L+ MY+KCG
Sbjct: 507 GASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCG 566
Query: 366 SIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLN 425
++ + VF I +K V W +I+ GMHG +A+DL M G+KP +TFI V
Sbjct: 567 CLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFA 626
Query: 426 ACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNF 485
ACSH+G+V++G R F +M DYG+EP+ +HY C+VD+L R G ++EA + MP N
Sbjct: 627 ACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNK 686
Query: 486 V-IWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREM 544
W SLL +R H N +IGE AA NLI++ P+ YV+L+NIY++AG WDK +EVR
Sbjct: 687 AGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRN 746
Query: 545 MKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQV 604
MK++G RK+PG S IEH +H+FV GD SHPQ++++ L + +++ G+VPDT+ V
Sbjct: 747 MKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCV 806
Query: 605 LLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYN 664
L +E+ EKE L HSE+LAIAFG++N + IR+ KNLRVCNDCH TK +S I +
Sbjct: 807 LHNVEED-EKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVD 865
Query: 665 REIIVRDNSRFHHFKNGSCSCKDFW 689
REII+RD RFH FKNG+CSC D+W
Sbjct: 866 REIILRDVRRFHRFKNGTCSCGDYW 890
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 216/434 (49%), Gaps = 17/434 (3%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
A SIF I Q S + L++ V + EA+ + D++ + PDN+ P ++K A
Sbjct: 51 APSIF--ISQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVA 108
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKF-VLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWN 192
L ++ GKQIH V+K G+G D V ++LV++Y K G+ +VFD + +++ VSWN
Sbjct: 109 DLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN 168
Query: 193 CLIDGYVKKGEVEVAMKLFDEMPDRDL-FSWTCLVDGFSKCGKVEIAREIF-------YR 244
LI + E+A++ F M D ++ S LV + C + + + Y
Sbjct: 169 SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYG 228
Query: 245 MPNRNLVSW--NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALE 302
+ L S+ N ++ Y K G + S+ L RDL+TWN++++ N + +EALE
Sbjct: 229 LRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 303 LLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFV-VDGVLGTLLIQMY 361
L M++ V P++ T+ S L A + L +L G+ +H+Y +KNG + + +G+ L+ MY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 362 SKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCR-MGMKPTAITF 420
C + S VF + +K+G W AMI G + +AL LF M G+ + T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 421 IGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMP 480
GV+ AC +G + ++ G++ L+D+ R G ++ A M
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKR-GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME 467
Query: 481 MRPNFVIWMSLLSG 494
R + V W ++++G
Sbjct: 468 DR-DLVTWNTMITG 480
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/448 (25%), Positives = 204/448 (45%), Gaps = 28/448 (6%)
Query: 77 IFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLG 136
+FDRI + + V +N LI ++ AL F +LD + P +FTL V+ + L
Sbjct: 155 VFDRISER-NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 137 ---AIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
+ GKQ+H + G + F++++LV+MY K G++ + + + +DLV+WN
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNT 272
Query: 194 LIDGYVKKGEVEVAMKLFDEM----PDRDLFSWTCLVDGFSKCGKVEIAREIF-YRMPN- 247
++ + ++ A++ EM + D F+ + ++ S + +E+ Y + N
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 248 ---RNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELL 304
N +A+++ Y V S +FD M R + WN+MIAGY N EAL L
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 305 ETM-LIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSK 363
M +L N T+ + A ++ +H ++VK G D + L+ MYS+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 364 CGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKM-----------CRMG 412
G I+ A+ +F + + + W MI G AL L +KM R+
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 413 MKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEA 472
+KP +IT + +L +C+ + G+ I + + + LVD+ + G L+ +
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGCLQMS 571
Query: 473 KSTIESMPMRPNFVIWMSLLSGARNHGN 500
+ + +P + N + W ++ HGN
Sbjct: 572 RKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 42/247 (17%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+++HA ++K NL + S L+ +Y L +R +FD+I Q +++ +N++I Y
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAK--CGCLQMSRKVFDQIPQK-NVITWNVIIMAY 593
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ EA+ L ++ + + P+ T V + G + EG +I V K +G +
Sbjct: 594 GMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP 652
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
SS YA C++D + G ++ A +L + MP R
Sbjct: 653 ---SS--DHYA------------------------CVVDLLGRAGRIKEAYQLMNMMP-R 682
Query: 218 DL---FSWTCLVDGFSKCGKVEI----AREIFYRMPNRNLVSWNAMINGYMKAGDVDSAC 270
D +W+ L+ +EI A+ + PN + + N Y AG D A
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV-ASHYVLLANIYSSAGLWDKAT 741
Query: 271 ELFDDME 277
E+ +M+
Sbjct: 742 EVRRNMK 748
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 261/690 (37%), Positives = 383/690 (55%), Gaps = 32/690 (4%)
Query: 26 NILKFSSTHKETQQLHAL-SVKTNLIYHSGISSRLLS--LYVDPHINNLHYARSIFDRIL 82
+I+ S + QQ+ L SV + + I L++ L+ D + NL R++F R
Sbjct: 2 SIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQT 61
Query: 83 ----------QHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGA 132
Q P++ LYN LI +V N HE L LF + L FT P V+K
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 133 ARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWN 192
R + K G +H LV K GF D ++SL+S+Y+ G ++ ++FD + D+ +V+W
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWT 181
Query: 193 CLIDGYVKKGEVEVAMKLFDEM------PDRDLFSWTCLVDGFSKC---GKVEIAREIFY 243
L GY G A+ LF +M PD +V S C G ++ I
Sbjct: 182 ALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYF-----IVQVLSACVHVGDLDSGEWIVK 236
Query: 244 RMP----NRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFME 299
M +N ++N Y K G ++ A +FD M +D++TW++MI GY N E
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKE 296
Query: 300 ALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQ 359
+EL ML ++ P+ ++V LS+ A L L+ G W S I ++ F+ + + LI
Sbjct: 297 GIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALID 356
Query: 360 MYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAIT 419
MY+KCG++ VF+ + +K + A I GL +G + +F + ++G+ P T
Sbjct: 357 MYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGST 416
Query: 420 FIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESM 479
F+G+L C HAGL+ DG R+FN + Y ++ T+EHYGC+VD+ R G L++A I M
Sbjct: 417 FLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDM 476
Query: 480 PMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVS 539
PMRPN ++W +LLSG R + + E LI + P G YV LSNIY+ G+WD+ +
Sbjct: 477 PMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAA 536
Query: 540 EVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVP 599
EVR+MM K+G +K PG S IE G +HEF+ DKSHP +D+I++KL ++ N+++ G VP
Sbjct: 537 EVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVP 596
Query: 600 DTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLL 659
T V +E++ EKE L HSE+LA+A GLI+ IR+VKNLRVC DCH V KL+
Sbjct: 597 TTEFVFFDVEEE-EKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLI 655
Query: 660 SGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
S I REI+VRDN+RFH F NGSCSC D+W
Sbjct: 656 SKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 256/650 (39%), Positives = 375/650 (57%), Gaps = 21/650 (3%)
Query: 57 SRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDR 116
SRLL NL ++F+R + + +N +I + S EAL F +
Sbjct: 14 SRLLHTERHTERQNL---TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKL 70
Query: 117 FLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLG 176
L P + PC IK + L I GKQ H F G+ D FV S+L+ MY+ G+++
Sbjct: 71 SLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 177 RRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLF-----DEMPDRD--LFSWTCLVDGF 229
R+VFD + +++VSW +I GY G A+ LF DE D D LV
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 230 SKCGKV-------EIAREIFYRMPNRNLVSWNAMINGYMKAGD--VDSACELFDDMEIRD 280
S C +V I + R +R + N +++ Y K G+ V A ++FD + +D
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 281 LITWNSMIAGYELNGRFMEALELLETMLIGDVLP-NDATLVSALSAVAGLAVLNKGRWMH 339
+++NS+++ Y +G EA E+ ++ V+ N TL + L AV+ L G+ +H
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 340 SYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMAT 399
+++ G D ++GT +I MY KCG +E+A F + K V WTAMI G GMHG A
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAA 370
Query: 400 QALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCL 459
+AL+LF M G++P ITF+ VL ACSHAGL +G R+FN M +G+EP +EHYGC+
Sbjct: 371 KALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCM 430
Query: 460 VDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTI 519
VD+L R G+L++A I+ M M+P+ +IW SLL+ R H N ++ E + L ++
Sbjct: 431 VDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNC 490
Query: 520 GCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTD 579
G Y++LS+IYA AG+W V VR +MK RG K PG S +E G +H F++GD+ HPQ +
Sbjct: 491 GYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQRE 550
Query: 580 EIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSP 639
+I+ L+E+ KL AG+V +T+ V + D++EKE L HSE+LAIAFG++N S
Sbjct: 551 KIYEFLAELNRKLLEAGYVSNTSSVCHDV-DEEEKEMTLRVHSEKLAIAFGIMNTVPGST 609
Query: 640 IRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+ +VKNLRVC+DCH+V KL+S I +RE +VRD RFHHFK+G CSC D+W
Sbjct: 610 VNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 12/265 (4%)
Query: 37 TQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKC 96
T+ +H+ +K + + LL Y + AR IFD+I+ V YN ++
Sbjct: 202 TESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR-VSYNSIMSV 260
Query: 97 YVFNQRSHEALTLFCDLLDRFLLPDN-FTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGF 155
Y + S+EA +F L+ ++ N TL V+ + GA++ GK IH V ++G
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
D V +S++ MY K G ++ R+ FD M +K++ SW +I GY G A++LF M
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 216 DRDLF-SWTCLVDGFSKCGKVEIARE---IFYRMPNR-----NLVSWNAMINGYMKAGDV 266
D + ++ V + C + E F M R L + M++ +AG +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 267 DSACELFDDMEIR-DLITWNSMIAG 290
A +L M+++ D I W+S++A
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 459 bits (1181), Expect = e-128, Method: Compositional matrix adjust.
Identities = 244/622 (39%), Positives = 362/622 (58%), Gaps = 8/622 (1%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLP-DNFTLPCVIKGA 132
AR +FDR+ + + +L+N +I Y N+ E++ +F DL++ D TL ++
Sbjct: 173 ARKVFDRMPEKDT-ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 133 ARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWN 192
A L ++ G QIH L K G +VL+ +S+Y+K G+I +G +F D+V++N
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 193 CLIDGYVKKGEVEVAMKLFDE-MPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLV 251
+I GY GE E+++ LF E M + LV G + + I N +
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFL 351
Query: 252 SW----NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETM 307
S A+ Y K +++SA +LFD+ + L +WN+MI+GY NG +A+ L M
Sbjct: 352 SHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM 411
Query: 308 LIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSI 367
+ PN T+ LSA A L L+ G+W+H + F + T LI MY+KCGSI
Sbjct: 412 QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSI 471
Query: 368 ESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNAC 427
A +F ++KK W MI G G+HG +AL++F +M G+ PT +TF+ VL AC
Sbjct: 472 AEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYAC 531
Query: 428 SHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVI 487
SHAGLV +G FN MI+ YG EP+++HY C+VDIL R G+L+ A IE+M + P +
Sbjct: 532 SHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSV 591
Query: 488 WMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKK 547
W +LL R H + ++ + L ++ PD +G +V+LSNI++A + + + VR+ KK
Sbjct: 592 WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKK 651
Query: 548 RGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLC 607
R K PG + IE H F GD+SHPQ EI+ KL ++ K++ AG+ P+T L
Sbjct: 652 RKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD 711
Query: 608 IEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREI 667
+E++ E+E ++ HSERLAIAFGLI + + IRI+KNLRVC DCH+VTKL+S I R I
Sbjct: 712 VEEE-ERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVI 770
Query: 668 IVRDNSRFHHFKNGSCSCKDFW 689
+VRD +RFHHFK+G CSC D+W
Sbjct: 771 VVRDANRFHHFKDGVCSCGDYW 792
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 137/529 (25%), Positives = 249/529 (47%), Gaps = 38/529 (7%)
Query: 68 INNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRF-LLPDNFTLP 126
+ ++YAR IF + Q P + L+N+L++ + N+ H +L++F L L P++ T
Sbjct: 65 LGAIYYARDIFLSV-QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYA 123
Query: 127 CVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDK 186
I A+ + G+ IHG G + + S++V MY KF ++ R+VFD M +K
Sbjct: 124 FAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK 183
Query: 187 DLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTC----------LVDGFSKCGKVE 236
D + WN +I GY K ++++F RDL + +C ++ ++ ++
Sbjct: 184 DTILWNTMISGYRKNEMYVESIQVF-----RDLINESCTRLDTTTLLDILPAVAELQELR 238
Query: 237 IAREIFYRMPNRNLVSWNAMING----YMKAGDVDSACELFDDMEIRDLITWNSMIAGYE 292
+ +I S + ++ G Y K G + LF + D++ +N+MI GY
Sbjct: 239 LGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYT 298
Query: 293 LNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGV 352
NG +L L + +++ +TLVS L V+G +L +H Y +K+ F+
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVS-LVPVSGHLMLIYA--IHGYCLKSNFLSHAS 355
Query: 353 LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG 412
+ T L +YSK IESA +F +K + W AMI G +G+ A+ LF +M +
Sbjct: 356 VSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE 415
Query: 413 MKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEA 472
P +T +L+AC+ G ++ G ++ + ++ E +I L+ + + G + EA
Sbjct: 416 FSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 473 KSTIESMPMRPNFVIWMSLLSGARNHGNK----DIGEYAANNLIKVAPDTIGCYVVLSNI 528
+ + M + N V W +++SG HG +I N+ I P T C + +
Sbjct: 475 RRLFDLM-TKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSH 533
Query: 529 YAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQ 577
+ D++ M+ + GF +P S++H + + ++G H Q
Sbjct: 534 AGLVKEGDEI--FNSMIHRYGF--EP---SVKHYACMVD-ILGRAGHLQ 574
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 260/674 (38%), Positives = 390/674 (57%), Gaps = 18/674 (2%)
Query: 26 NILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHP 85
++LK T + ++H L++K ++ +++ L+ LY + AR +FD +
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLY--SRYKAVGNARILFDE-MPVR 214
Query: 86 SLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIH 145
+ +N +I Y + + EALTL L D+ T+ ++ G G IH
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 146 GLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVE 205
K G + FV + L+ +YA+FG + ++VFD M +DL+SWN +I Y +
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 206 VAMKLFDEMP----DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNR-----NLVSWNAM 256
A+ LF EM D + L S+ G + R + + ++ NA+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLI-GDVLPN 315
+ Y K G VDSA +F+ + D+I+WN++I+GY NG EA+E+ M G++ N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 316 DATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFR 375
T VS L A + L +G +H ++KNG +D + T L MY KCG +E AL++F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 376 AISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVND 435
I + W +I G HG +A+ LF +M G+KP ITF+ +L+ACSH+GLV++
Sbjct: 511 QIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 436 GRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGA 495
G+ F MM DYGI P+++HYGC+VD+ R G LE A I+SM ++P+ IW +LLS
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 496 RNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPG 555
R HGN D+G+ A+ +L +V P+ +G +V+LSN+YA+AG+W+ V E+R + +G RK PG
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 556 SSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKE 615
SS+E + F G+++HP +E++ +L+ ++ KLK G+VPD VL +ED EKE
Sbjct: 691 WSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDD-EKE 749
Query: 616 AELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRF 675
L +HSERLAIAF LI +++ IRI KNLRVC DCHSVTK +S I REIIVRD++RF
Sbjct: 750 HILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRF 809
Query: 676 HHFKNGSCSCKDFW 689
HHFKNG CSC D+W
Sbjct: 810 HHFKNGVCSCGDYW 823
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 162/551 (29%), Positives = 282/551 (51%), Gaps = 26/551 (4%)
Query: 26 NILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHP 85
+ ++ + + + LHA V + I + IS++L++LY ++ N+ AR FD I Q+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYC--YLGNVALARHTFDHI-QNR 115
Query: 86 SLVLYNLLIKCYVFNQRSHEALTLFC-DLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQI 144
+ +NL+I Y S E + F +L L PD T P V+K A R + +G +I
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK-ACR--TVIDGNKI 172
Query: 145 HGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEV 204
H L K GF +D +V +SL+ +Y+++ + R +FD M +D+ SWN +I GY + G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 205 EVAMKLFDEMPDRDLFSWTCLVDGFSKCGK----VEI-AREIFYRMPNRNLVSWNAMING 259
+ A+ L + + D + L+ ++ G V I + I + + + VS N +I+
Sbjct: 233 KEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS-NKLIDL 291
Query: 260 YMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATL 319
Y + G + ++FD M +RDLI+WNS+I YELN + + A+ L + M + + P+ TL
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 320 VSALSAVAGLAVLNKGRWMHSYIVKNG-FVVDGVLGTLLIQMYSKCGSIESALTVFRAIS 378
+S S ++ L + R + + ++ G F+ D +G ++ MY+K G ++SA VF +
Sbjct: 352 ISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP 411
Query: 379 KKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG-MKPTAITFIGVLNACSHAGLVNDGR 437
V W +I G +G A++A++++N M G + T++ VL ACS AG + G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 438 RYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLS--GA 495
+ ++ + G+ + L D+ + G LE+A S +P R N V W +L++ G
Sbjct: 472 KLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGF 529
Query: 496 RNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPG 555
HG K + + V PD I +V L + + +G D+ EMM+ D G
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHI-TFVTLLSACSHSGLVDEGQWCFEMMQ-----TDYG 583
Query: 556 -SSSIEHRGVL 565
+ S++H G +
Sbjct: 584 ITPSLKHYGCM 594
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/481 (45%), Positives = 331/481 (68%), Gaps = 8/481 (1%)
Query: 216 DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDD 275
D+D F T L++ +S CG + A+ +F +++L +WN+++N Y KAG +D A +LFD+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 276 MEIRDLITWNSMIAGYELNGRFMEALELLETMLIGD-----VLPNDATLVSALSAVAGLA 330
M R++I+W+ +I GY + G++ EAL+L M + V PN+ T+ + LSA L
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 331 VLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAI-SKKKVGHWTAMI 389
L +G+W+H+YI K +D VLGT LI MY+KCGS+E A VF A+ SKK V ++AMI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 390 VGLGMHGMATQALDLFNKMCRM-GMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYG 448
L M+G+ + LF++M + P ++TF+G+L AC H GL+N+G+ YF MMI ++G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 449 IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAA 508
I P+I+HYGC+VD+ R+G ++EA+S I SMPM P+ +IW SLLSG+R G+ E A
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 509 NNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEF 568
LI++ P G YV+LSN+YA G+W +V +R M+ +G K PG S +E GV+HEF
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 569 VVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIA 628
VVGD+S +++ I++ L E+ +L+ AG+V DT +VLL + ++K+KE L HSE+LAIA
Sbjct: 454 VVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDL-NEKDKEIALSYHSEKLAIA 512
Query: 629 FGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDF 688
F L+ + +P+RI+KNLR+C DCH V K++S +++REI+VRD +RFHHF++GSCSC+DF
Sbjct: 513 FCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDF 572
Query: 689 W 689
W
Sbjct: 573 W 573
Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 174/377 (46%), Gaps = 55/377 (14%)
Query: 73 YARSIFDRILQHPSL--VLYNLLIKCYVFNQRS---HEALTLFCDLLDRFLLPDNFTLPC 127
YA IF ++H L L+N++I+ V N S H ++++ + + + PD T P
Sbjct: 10 YANPIFH--IRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPF 67
Query: 128 VIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKD 187
++ + G++ H + G D FV +SL++MY+ G++ +RVFD KD
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKD 127
Query: 188 LVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRM-- 245
L +WN +++ Y K G ++ A KLFDEMP+R++ SW+CL++G+ CGK + A ++F M
Sbjct: 128 LPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQL 187
Query: 246 --PNRNLVSWN----------------------------------------AMINGYMKA 263
PN V N A+I+ Y K
Sbjct: 188 PKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKC 247
Query: 264 GDVDSACELFDDM-EIRDLITWNSMIAGYELNGRFMEALELLETMLIGD-VLPNDATLVS 321
G ++ A +F+ + +D+ +++MI + G E +L M D + PN T V
Sbjct: 248 GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVG 307
Query: 322 ALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGT-LLIQMYSKCGSIESALTVFRAIS-K 379
L A ++N+G+ +++ + + ++ +Y + G I+ A + ++ +
Sbjct: 308 ILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPME 367
Query: 380 KKVGHWTAMIVGLGMHG 396
V W +++ G M G
Sbjct: 368 PDVLIWGSLLSGSRMLG 384
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 28/298 (9%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLL-----DRFLLPDNFTLPCV 128
AR +FD + + +++ ++ LI YV + EAL LF ++ + F+ P+ FT+ V
Sbjct: 147 ARKLFDEMPER-NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 129 IKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAM-DDKD 187
+ RLGA+++GK +H + K D + ++L+ MYAK G ++ +RVF+A+ KD
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 188 LVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFS----------WTCLVDGFSKCGK--V 235
+ +++ +I G + +LF EM D + C+ G GK
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 236 EIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIR-DLITWNSMIAGYELN 294
++ E F P ++ + M++ Y ++G + A M + D++ W S+++G +
Sbjct: 326 KMMIEEFGITP--SIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRML 383
Query: 295 GRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGV 352
G L+ ++ D + + A ++ LS V GRWM +++ V G+
Sbjct: 384 GDIKTCEGALKRLIELDPMNSGAYVL--LSNVYA----KTGRWMEVKCIRHEMEVKGI 435
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 37/227 (16%)
Query: 312 VLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESAL 371
V P+ T L + L G+ H+ I+ G D + T L+ MYS CG + SA
Sbjct: 58 VSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQ 117
Query: 372 TV-------------------------------FRAISKKKVGHWTAMIVGLGMHGMATQ 400
V F + ++ V W+ +I G M G +
Sbjct: 118 RVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKE 177
Query: 401 ALDLFNKMC-----RMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEH 455
ALDLF +M ++P T VL+AC G + G ++ + I+ Y +E I
Sbjct: 178 ALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVEIDIVL 236
Query: 456 YGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKD 502
L+D+ + G LE AK ++ + + + +++ +G D
Sbjct: 237 GTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 266/673 (39%), Positives = 381/673 (56%), Gaps = 72/673 (10%)
Query: 20 PSRLHWNILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLY-VDPHINNLHYARSIF 78
P +L I K S + E Q+HA ++ NL+ H L L+ + ++ ++F
Sbjct: 29 PEKLAVLIDK-SQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALF 87
Query: 79 DRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAI 138
+ + P L L+ I N +A L+ LL + P+ FT ++K +
Sbjct: 88 HQTID-PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----T 142
Query: 139 KEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGY 198
K GK IH V K FG ID Y
Sbjct: 143 KSGKLIHTHVLK--FGLG--------------------------------------IDPY 162
Query: 199 VKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMIN 258
V G LVD ++K G V A+++F RMP R+LVS AMI
Sbjct: 163 VATG----------------------LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 259 GYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLI-GDVLPNDA 317
Y K G+V++A LFD M RD+++WN MI GY +G +AL L + +L G P++
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 318 TLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAI 377
T+V+ALSA + + L GRW+H ++ + ++ + T LI MYSKCGS+E A+ VF
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 378 SKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRM-GMKPTAITFIGVLNACSHAGLVNDG 436
+K + W AMI G MHG + AL LFN+M + G++PT ITFIG L AC+HAGLVN+G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 437 RRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGAR 496
R F M +YGI+P IEHYGCLV +L R G L+ A TI++M M + V+W S+L +
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 497 NHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGS 556
HG+ +G+ A LI + G YV+LSNIYA+ G ++ V++VR +MK++G K+PG
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 557 SSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEA 616
S+IE +HEF GD+ H ++ EI++ L ++ ++K+ G+VP+T VL +E + EKE
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLE-ETEKEQ 559
Query: 617 ELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFH 676
L+ HSERLAIA+GLI+ K SP++I KNLRVC+DCH+VTKL+S I R+I++RD +RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 677 HFKNGSCSCKDFW 689
HF +GSCSC DFW
Sbjct: 620 HFTDGSCSCGDFW 632
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 18/214 (8%)
Query: 298 MEALELLETMLIGDVLPNDATLVSALSAVAGLAVL-------NKGRWMHSYIVKNGFVVD 350
M + LL T L + L AT L LAVL ++ +H+ I+++ ++
Sbjct: 1 MASSPLLATSLPQNQLSTTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLH 60
Query: 351 G---VLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNK 407
VL L + Y+ G I +L +F + +TA I ++G+ QA L+ +
Sbjct: 61 PRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQ 120
Query: 408 MCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIN-DYGIEPTIEHYGCLVDILCRT 466
+ + P TF +L +CS G+ ++ GI+P + LVD+ +
Sbjct: 121 LLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVA--TGLVDVYAKG 174
Query: 467 GYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGN 500
G + A+ + MP R + V ++++ GN
Sbjct: 175 GDVVSAQKVFDRMPER-SLVSSTAMITCYAKQGN 207
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust.
Identities = 250/692 (36%), Positives = 376/692 (54%), Gaps = 76/692 (10%)
Query: 74 ARSIFDRI-LQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGA 132
AR +F++ + V+YN +I + N + A+ LFC + PDNFT V+ G
Sbjct: 99 ARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGL 158
Query: 133 ARLGA-IKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAK--------------FGEI---- 173
A + K+ Q H K G G+ V ++LVS+Y+K F EI
Sbjct: 159 ALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 174 -----------------DLGRRVFDAMDDK-DLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
DLG + + MDD LV++N +I GYV +G + A+++ M
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 216 D-----------------------------------RDLFSW---TCLVDGFSKCGKVEI 237
R+ FS+ LV + KCGK +
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 238 AREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRF 297
AR IF +MP ++LVSWNA+++GY+ +G + A +F +M+ +++++W MI+G NG
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 298 MEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLL 357
E L+L M P D A+ + A L G+ H+ ++K GF G L
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 358 IQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTA 417
I MY+KCG +E A VFR + W A+I LG HG +A+D++ +M + G++P
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDR 518
Query: 418 ITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIE 477
IT + VL ACSHAGLV+ GR+YF+ M Y I P +HY L+D+LCR+G +A+S IE
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIE 578
Query: 478 SMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDK 537
S+P +P IW +LLSG R HGN ++G AA+ L + P+ G Y++LSN++AA GQW++
Sbjct: 579 SLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEE 638
Query: 538 VSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGH 597
V+ VR++M+ RG +K+ S IE +H F+V D SHP+ + ++ L ++ +++ G+
Sbjct: 639 VARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGY 698
Query: 598 VPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTK 657
VPDT+ VL +E KE L HSE++A+AFGL+ + + IRI KNLR C DCH+ +
Sbjct: 699 VPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFR 758
Query: 658 LLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
LS + R+II+RD RFHHF+NG CSC +FW
Sbjct: 759 FLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/533 (21%), Positives = 218/533 (40%), Gaps = 114/533 (21%)
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
R +++ + +HG + GF +L+ L+ +Y K E++ R++FD + + D ++
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 194 LIDGYVKKGEVEVAMKLFDEMPD--RDLFSWTCLVDGFSKCGKVEIAREIFYRMPN---- 247
++ GY G++ +A +F++ P RD + ++ GFS A +F +M +
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 248 --------------------RNLVSW----------------NAMINGYMKAGD----VD 267
+ V + NA+++ Y K +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 268 SACELFDDMEIRDLITWNSMIAGYELNGRF------------------------------ 297
SA ++FD++ +D +W +M+ GY NG F
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 298 --MEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKN---GFVVDGV 352
EALE++ M+ + ++ T S + A A +L G+ +H+Y+++ F D
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNS 325
Query: 353 LGTL---------------------------LIQMYSKCGSIESALTVFRAISKKKVGHW 385
L +L L+ Y G I A +F+ + +K + W
Sbjct: 326 LVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSW 385
Query: 386 TAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIN 445
MI GL +G + L LF+ M R G +P F G + +C+ G +G++Y ++
Sbjct: 386 MIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK 445
Query: 446 DYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLS--GARNHGNKDI 503
G + ++ L+ + + G +EEA+ +MP + V W +L++ G HG + +
Sbjct: 446 -IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS-VSWNALIAALGQHGHGAEAV 503
Query: 504 GEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGS 556
Y + PD I VL+ + AG D+ + + M+ +R PG+
Sbjct: 504 DVYEEMLKKGIRPDRITLLTVLTAC-SHAGLVDQGRKYFDSMETV-YRIPPGA 554
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 178/397 (44%), Gaps = 53/397 (13%)
Query: 225 LVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEI--RDLI 282
L+D + K ++ AR++F + + ++ M++GY +GD+ A +F+ + RD +
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 283 TWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKG-RWMHSY 341
+N+MI G+ N A+ L M P++ T S L+ +A +A K H+
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 342 IVKNGFVVDGVLGTLLIQMYSKCGS----IESALTVFRAISKKKVGHWTAMIVGL----- 392
+K+G + L+ +YSKC S + SA VF I +K WT M+ G
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 393 ---------GM------------------HGMATQALDLFNKMCRMGMKPTAITFIGVLN 425
GM G +AL++ +M G++ T+ V+
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 426 ACSHAGLVNDGRRYFNMMINDYGIEPTIEHY-GCLVDILCRTGYLEEAKSTIESMPMRPN 484
AC+ AGL+ G++ ++ E H+ LV + + G +EA++ E MP + +
Sbjct: 295 ACATAGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK-D 350
Query: 485 FVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREM 544
V W +LLSG + G+ IGE A ++ I ++++ + A G ++ ++
Sbjct: 351 LVSWNALLSGYVSSGH--IGE-AKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 545 MKKRGFRKDPG----SSSIEHRGVLHEFVVGDKSHPQ 577
MK+ GF +P S +I+ VL + G + H Q
Sbjct: 408 MKREGF--EPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 239/662 (36%), Positives = 396/662 (59%), Gaps = 15/662 (2%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+QLH +K+ + + + L++ Y+ + AR +FD + + ++ +N +I Y
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQ--RVDSARKVFDEMTER-DVISWNSIINGY 271
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
V N + + L++F +L + D T+ V G A I G+ +H + K F +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
++L+ MY+K G++D + VF M D+ +VS+ +I GY ++G A+KLF+EM +
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 218 ----DLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNL-----VSWNAMINGYMKAGDVDS 268
D+++ T +++ ++ ++ + + + +L VS NA+++ Y K G +
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS-NALMDMYAKCGSMQE 450
Query: 269 ACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL-PNDATLVSALSAVA 327
A +F +M ++D+I+WN++I GY N EAL L +L P++ T+ L A A
Sbjct: 451 AELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACA 510
Query: 328 GLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTA 387
L+ +KGR +H YI++NG+ D + L+ MY+KCG++ A +F I+ K + WT
Sbjct: 511 SLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTV 570
Query: 388 MIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDY 447
MI G GMHG +A+ LFN+M + G++ I+F+ +L ACSH+GLV++G R+FN+M ++
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 448 GIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYA 507
IEPT+EHY C+VD+L RTG L +A IE+MP+ P+ IW +LL G R H + + E
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 508 ANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHE 567
A + ++ P+ G YV+++NIYA A +W++V +R+ + +RG RK+PG S IE +G ++
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 568 FVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAI 627
FV GD S+P+T+ I + L ++R ++ G+ P T L+ E+ EKE L HSE+LA+
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEM-EKEEALCGHSEKLAM 809
Query: 628 AFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKD 687
A G+I+ IR+ KNLRVC DCH + K +S + REI++RD++RFH FK+G CSC+
Sbjct: 810 ALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRG 869
Query: 688 FW 689
FW
Sbjct: 870 FW 871
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 133/479 (27%), Positives = 235/479 (49%), Gaps = 16/479 (3%)
Query: 31 SSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLY 90
S + K+ +++ + S + S+L +Y + +L A +FD + +L +
Sbjct: 107 SKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTN--CGDLKEASRVFDEVKIEKAL-FW 163
Query: 91 NLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFK 150
N+L+ + ++ LF ++ + D++T CV K + L ++ G+Q+HG + K
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILK 223
Query: 151 LGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKL 210
GFG V +SLV+ Y K +D R+VFD M ++D++SWN +I+GYV G E + +
Sbjct: 224 SGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 211 FDEM----PDRDLFSWTCLVDGFSKCGKVEIAREI----FYRMPNRNLVSWNAMINGYMK 262
F +M + DL + + G + + + R + +R N +++ Y K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 263 AGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSA 322
GD+DSA +F +M R ++++ SMIAGY G EA++L E M + P+ T+ +
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 323 LSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKV 382
L+ A +L++G+ +H +I +N D + L+ MY+KCGS++ A VF + K +
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 383 GHWTAMIVGLGMHGMATQALDLFNKMCRMG-MKPTAITFIGVLNACSHAGLVNDGRRYFN 441
W +I G + A +AL LFN + P T VL AC+ + GR
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 442 -MMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHG 499
+M N Y + + + LVD+ + G L A + + + + V W +++G HG
Sbjct: 524 YIMRNGYFSDRHVAN--SLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMHG 579
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 232/451 (51%), Gaps = 28/451 (6%)
Query: 121 DNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVF 180
D TL V++ A ++K+GK++ + GF D + S L MY G++ RVF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 181 DAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM----PDRDLFSWTCLVDGFSKCGKVE 236
D + + + WN L++ K G+ ++ LF +M + D ++++C+ FS V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 237 IAREIF-----YRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGY 291
++ RN V N+++ Y+K VDSA ++FD+M RD+I+WNS+I GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 292 ELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDG 351
NG + L + ML+ + + AT+VS + A +++ GR +HS VK F +
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 352 VLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRM 411
L+ MYSKCG ++SA VFR +S + V +T+MI G G+A +A+ LF +M
Sbjct: 332 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 412 GMKPTAITFIGVLNACSHAGLVNDGRRYFNMMI-NDYGIEPTIEHYGCLVDILCRTGYLE 470
G+ P T VLN C+ L+++G+R + ND G + + + L+D+ + G ++
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQ 449
Query: 471 EAKSTIESMPMRPNFVIWMSLLSG-ARN-HGNKDIGEYAANNLI----KVAPD--TIGCY 522
EA+ M ++ + + W +++ G ++N + N+ + + NL+ + +PD T+ C
Sbjct: 450 EAELVFSEMRVK-DIISWNTIIGGYSKNCYANEALSLF---NLLLEEKRFSPDERTVACV 505
Query: 523 VVLSNIYAAAGQWDKVSEVREMMKKRGFRKD 553
+ A+ +DK E+ + + G+ D
Sbjct: 506 LPAC---ASLSAFDKGREIHGYIMRNGYFSD 533
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 106/227 (46%), Gaps = 6/227 (2%)
Query: 279 RDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWM 338
R + N+ + + +G A++LL D+ P TL S L A L G+ +
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEV 116
Query: 339 HSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMA 398
++I NGFV+D LG+ L MY+ CG ++ A VF + +K W ++ L G
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 399 TQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIND-YGIEPTIEHYG 457
+ ++ LF KM G++ + TF V + S V+ G + ++ +G ++ +
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGN-- 234
Query: 458 CLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIG 504
LV + ++ A+ + M R + + W S+++G ++G + G
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTER-DVISWNSIINGYVSNGLAEKG 280
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 245/661 (37%), Positives = 387/661 (58%), Gaps = 15/661 (2%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+++H L VK+ + L ++Y ++ AR +FDR+ + LV +N ++ Y
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAK--CRQVNEARKVFDRMPER-DLVSWNTIVAGY 211
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
N + AL + + + L P T+ V+ + L I GK+IHG + GF
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLV 271
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
+ ++LV MYAK G ++ R++FD M ++++VSWN +ID YV+ + AM +F +M D
Sbjct: 272 NISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 218 DLFSWTCLVDGF----SKCGKVEIAREIFYRMP-----NRNLVSWNAMINGYMKAGDVDS 268
+ V G + G +E R I +++ +RN+ N++I+ Y K +VD+
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFI-HKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 269 ACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAG 328
A +F ++ R L++WN+MI G+ NGR ++AL M V P+ T VS ++A+A
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 329 LAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAM 388
L++ + +W+H ++++ + + T L+ MY+KCG+I A +F +S++ V W AM
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 389 IVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYG 448
I G G HG AL+LF +M + +KP +TF+ V++ACSH+GLV G + F MM +Y
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 449 IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAA 508
IE +++HYG +VD+L R G L EA I MP++P ++ ++L + H N + E AA
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 509 NNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEF 568
L ++ PD G +V+L+NIY AA W+KV +VR M ++G RK PG S +E + +H F
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Query: 569 VVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIA 628
G +HP + +I++ L ++ +K AG+VPDT VL D KE+ L HSE+LAI+
Sbjct: 691 FSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQ--LLSTHSEKLAIS 748
Query: 629 FGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDF 688
FGL+N + + I + KNLRVC DCH+ TK +S + REI+VRD RFHHFKNG+CSC D+
Sbjct: 749 FGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDY 808
Query: 689 W 689
W
Sbjct: 809 W 809
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 235/512 (45%), Gaps = 75/512 (14%)
Query: 27 ILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPS 86
+L+ S+ KE +Q+ L K L ++L+SL+ ++ A +F+ I +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFC--RYGSVDEAARVFEPIDSKLN 100
Query: 87 LVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHG 146
VLY+ ++K + +AL F + + P + ++K ++ GK+IHG
Sbjct: 101 -VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 147 LVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEV 206
L+ K GF D F ++ L +MYAK +++ R+VFD M ++DLVSWN ++ GY + G +
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 207 AMKLFDEMPDRDLFS---------------------------------------WTCLVD 227
A+++ M + +L T LVD
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 228 GFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSM 287
++KCG +E AR++F M RN+VSWN+MI+ Y++
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ------------------------- 314
Query: 288 IAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGF 347
N EA+ + + ML V P D +++ AL A A L L +GR++H V+ G
Sbjct: 315 ------NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 348 VVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNK 407
+ + LI MY KC +++A ++F + + + W AMI+G +G AL+ F++
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQ 428
Query: 408 MCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTG 467
M +KP T++ V+ A + + + ++ + ++ ++ + LVD+ + G
Sbjct: 429 MRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCG 487
Query: 468 YLEEAKSTIESMPMRPNFVIWMSLLSGARNHG 499
+ A+ + M R + W +++ G HG
Sbjct: 488 AIMIARLIFDMMSER-HVTTWNAMIDGYGTHG 518
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/686 (36%), Positives = 389/686 (56%), Gaps = 76/686 (11%)
Query: 78 FDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGA 137
FD++ Q S V + +I Y + H+A+ + D++ + P FTL V+ A
Sbjct: 103 FDQLPQRDS-VSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRC 161
Query: 138 IKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAK---------------------------- 169
++ GK++H + KLG + V +SL++MYAK
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 170 ---FGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM-------PDRDL 219
G++DL F+ M ++D+V+WN +I G+ ++G A+ +F +M PDR
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 220 FS---------------------------------WTCLVDGFSKCGKVEIAREIFYRMP 246
+ L+ +S+CG VE AR + +
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 247 NRNLV--SWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELL 304
++L + A+++GY+K GD++ A +F ++ RD++ W +MI GYE +G + EA+ L
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLF 401
Query: 305 ETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKC 364
+M+ G PN TL + LS + LA L+ G+ +H VK+G + + LI MY+K
Sbjct: 402 RSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA 461
Query: 365 GSIESALTVFRAIS-KKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGV 423
G+I SA F I ++ WT+MI+ L HG A +AL+LF M G++P IT++GV
Sbjct: 462 GNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGV 521
Query: 424 LNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRP 483
+AC+HAGLVN GR+YF+MM + I PT+ HY C+VD+ R G L+EA+ IE MP+ P
Sbjct: 522 FSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP 581
Query: 484 NFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVRE 543
+ V W SLLS R H N D+G+ AA L+ + P+ G Y L+N+Y+A G+W++ +++R+
Sbjct: 582 DVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRK 641
Query: 544 MMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQ 603
MK +K+ G S IE + +H F V D +HP+ +EI+ + ++ +++K G+VPDT
Sbjct: 642 SMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTAS 701
Query: 604 VLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIY 663
VL +E++ KE L +HSE+LAIAFGLI+ ++ +RI+KNLRVCNDCH+ K +S +
Sbjct: 702 VLHDLEEEV-KEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLV 760
Query: 664 NREIIVRDNSRFHHFKNGSCSCKDFW 689
REIIVRD +RFHHFK+G CSC+D+W
Sbjct: 761 GREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 221/543 (40%), Gaps = 142/543 (26%)
Query: 144 IHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGE 203
+H V K G F +++++L+++Y+K G R++FD M + SWN ++ Y K+G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 204 VEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRM------PNR--------- 248
++ + FD++P RD SWT ++ G+ G+ A + M P +
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 249 ------------------------NLVSWNAMINGYMKAGD------------------- 265
N+ N+++N Y K GD
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 266 ------------VDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
+D A F+ M RD++TWNSMI+G+ G + AL++ ML +L
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 314 -PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESAL- 371
P+ TL S LSA A L L G+ +HS+IV GF + G++ LI MYS+CG +E+A
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 372 --------------------------------TVFRAISKKKVGHWTAMIVGLGMHGMAT 399
+F ++ + V WTAMIVG HG
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 400 QALDLFNKMCRMGMKPTAITFIGVLNACS-----------HAGLVNDGRRY----FNMMI 444
+A++LF M G +P + T +L+ S H V G Y N +I
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 445 NDYGIEPTIE----------------HYGCLVDILCRTGYLEEAKSTIESMPM---RPNF 485
Y I + ++ L + G+ EEA E+M M RP+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 486 VIWMSLLSGARNHGNKDIGEY---AANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVR 542
+ ++ + S + G + G ++ K+ P T+ Y + +++ AG + E
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIP-TLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 543 EMM 545
E M
Sbjct: 575 EKM 577
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 19/221 (8%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+Q+H +VK+ IY +S+ L+++Y N+ A FD I V + +I
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKA--GNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ + EAL LF +L L PD+ T V G + +G+Q F + DK
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ----YFDMMKDVDK 546
Query: 158 FV-----LSSLVSMYAKFGEIDLGRRVFDAMD-DKDLVSWN-----CLIDGYVKKGEVEV 206
+ + +V ++ + G + + + M + D+V+W C + + G+V
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAA 606
Query: 207 AMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPN 247
L E + +S L + +S CGK E A +I M +
Sbjct: 607 ERLLLLEPENSGAYS--ALANLYSACGKWEEAAKIRKSMKD 645
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 448 bits (1152), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/660 (35%), Positives = 378/660 (57%), Gaps = 12/660 (1%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
QQLHA + K ++ I LL+LY ++ A F + ++VL+N+++ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAK--CADIETALDYFLET-EVENVVLWNVMLVAY 465
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ +F + ++P+ +T P ++K RLG ++ G+QIH + K F +
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
+V S L+ MYAK G++D + KD+VSW +I GY + + A+ F +M DR
Sbjct: 526 YVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 218 DLFS-WTCLVDGFSKCGKVEIARE-------IFYRMPNRNLVSWNAMINGYMKAGDVDSA 269
+ S L + S C ++ +E + +L NA++ Y + G ++ +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 270 CELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGL 329
F+ E D I WN++++G++ +G EAL + M + N+ T SA+ A +
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 330 AVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMI 389
A + +G+ +H+ I K G+ + + LI MY+KCGSI A F +S K W A+I
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Query: 390 VGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGI 449
HG ++ALD F++M ++P +T +GVL+ACSH GLV+ G YF M ++YG+
Sbjct: 766 NAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGL 825
Query: 450 EPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAAN 509
P EHY C+VD+L R G L AK I+ MP++P+ ++W +LLS H N +IGE+AA+
Sbjct: 826 SPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAH 885
Query: 510 NLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFV 569
+L+++ P+ YV+LSN+YA + +WD R+ MK++G +K+PG S IE + +H F
Sbjct: 886 HLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFY 945
Query: 570 VGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAF 629
VGD++HP DEIH ++ + G+V D +L ++ ++K+ + HSE+LAI+F
Sbjct: 946 VGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQ-HEQKDPIIFIHSEKLAISF 1004
Query: 630 GLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
GL+++ + PI ++KNLRVCNDCH+ K +S + NREIIVRD RFHHF+ G+CSCKD+W
Sbjct: 1005 GLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 230/488 (47%), Gaps = 22/488 (4%)
Query: 28 LKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSL 87
LK + + E ++LH+ +K L + +S +L Y+ +L+ A +FD + + ++
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL--FKGDLYGAFKVFDEMPER-TI 151
Query: 88 VLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEG--KQIH 145
+N +IK E LF ++ + P+ T V++ A R G++ +QIH
Sbjct: 152 FTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE-ACRGGSVAFDVVEQIH 210
Query: 146 GLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVE 205
+ G V + L+ +Y++ G +DL RRVFD + KD SW +I G + K E E
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISG-LSKNECE 269
Query: 206 V-AMKLFDEMPDRDL----FSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVS----WNAM 256
A++LF +M + ++++ ++ K +EI ++ + S NA+
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPND 316
++ Y G++ SA +F +M RD +T+N++I G G +A+EL + M + + P+
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 317 ATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRA 376
TL S + A + L +G+ +H+Y K GF + + L+ +Y+KC IE+AL F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 377 ISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDG 436
+ V W M+V G+ + +F +M + P T+ +L C G + G
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 437 RRYFNMMINDYGIEPTIEHYGC--LVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSG 494
+ + +I + Y C L+D+ + G L+ A + + + V W ++++G
Sbjct: 510 EQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Query: 495 ARNHGNKD 502
+ D
Sbjct: 566 YTQYNFDD 573
Score = 32.7 bits (73), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 74/179 (41%), Gaps = 5/179 (2%)
Query: 31 SSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLY 90
++ K+ +Q+HA+ KT + + + L+S+Y ++ A F + + V +
Sbjct: 705 TANMKQGKQVHAVITKTGYDSETEVCNALISMYA--KCGSISDAEKQFLEV-STKNEVSW 761
Query: 91 NLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEG-KQIHGLVF 149
N +I Y + EAL F ++ + P++ TL V+ + +G + +G +
Sbjct: 762 NAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNS 821
Query: 150 KLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDK-DLVSWNCLIDGYVKKGEVEVA 207
+ G +V M + G + + M K D + W L+ V +E+
Sbjct: 822 EYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIG 880
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/702 (34%), Positives = 391/702 (55%), Gaps = 51/702 (7%)
Query: 33 THKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNL 92
+ + +QLHA ++T + H+ +S ++S+Y + + + + L+ P ++ +
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLF---KTLKSPPVLAWKS 75
Query: 93 LIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLG 152
+I+C+ +AL F ++ PD+ P V+K + ++ G+ +HG + +LG
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 153 FGFDKFVLSSLVSMYAK-------------------------------------FGEIDL 175
D + ++L++MYAK FG ID
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG-IDS 194
Query: 176 GRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDL----FSWTCLVDGFSK 231
RRVF+ M KD+VS+N +I GY + G E A+++ EM DL F+ + ++ FS+
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSE 254
Query: 232 CGKVEIAREIFYRMPNRNLVS----WNAMINGYMKAGDVDSACELFDDMEIRDLITWNSM 287
V +EI + + + S +++++ Y K+ ++ + +F + RD I+WNS+
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 288 IAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGF 347
+AGY NGR+ EAL L M+ V P S + A A LA L+ G+ +H Y+++ GF
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 348 VVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNK 407
+ + + L+ MYSKCG+I++A +F ++ WTA+I+G +HG +A+ LF +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 408 MCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTG 467
M R G+KP + F+ VL ACSH GLV++ YFN M YG+ +EHY + D+L R G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 468 YLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSN 527
LEEA + I M + P +W +LLS H N ++ E A + V + +G YV++ N
Sbjct: 495 KLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCN 554
Query: 528 IYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSE 587
+YA+ G+W +++++R M+K+G RK P S IE + H FV GD+SHP D+I+ L
Sbjct: 555 MYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKA 614
Query: 588 MRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLR 647
+ +++ G+V DT+ VL ++++ ++E L HSERLA+AFG+IN + + IR+ KN+R
Sbjct: 615 VMEQMEKEGYVADTSGVLHDVDEEHKREL-LFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 648 VCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+C DCH K +S I REIIVRDNSRFHHF G+CSC D+W
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 240/658 (36%), Positives = 383/658 (58%), Gaps = 11/658 (1%)
Query: 39 QLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYV 98
Q+H + VK L +S+ L++LY+ N+ AR +FD+ + S+V +N +I Y
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYL--KCGNVRKARILFDKT-EVKSVVTWNSMISGYA 271
Query: 99 FNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKF 158
N EAL +F + ++ + VIK A L ++ +Q+H V K GF FD+
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 159 VLSSLVSMYAKFGEIDLGRRVFDAMD-DKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
+ ++L+ Y+K + R+F + ++VSW +I G+++ E A+ LF EM +
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 218 DL----FSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELF 273
+ F+++ ++ E+ ++ R+ A+++ Y+K G V+ A ++F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 274 DDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGL-AVL 332
++ +D++ W++M+AGY G A+++ + G + PN+ T S L+ A A +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 333 NKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGL 392
+G+ H + +K+ + + L+ MY+K G+IESA VF+ +K + W +MI G
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 393 GMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPT 452
HG A +ALD+F +M + +K +TFIGV AC+HAGLV +G +YF++M+ D I PT
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 453 IEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLI 512
EH C+VD+ R G LE+A IE+MP IW ++L+ R H ++G AA +I
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 513 KVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGD 572
+ P+ YV+LSN+YA +G W + ++VR++M +R +K+PG S IE + + F+ GD
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGD 751
Query: 573 KSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLI 632
+SHP D+I+ KL ++ +LK G+ PDT+ VL I+D+ KEA L HSERLAIAFGLI
Sbjct: 752 RSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDE-HKEAVLAQHSERLAIAFGLI 810
Query: 633 NVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHF-KNGSCSCKDFW 689
SP+ I+KNLRVC DCH V KL++ I REI+VRD++RFHHF +G CSC DFW
Sbjct: 811 ATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 226/462 (48%), Gaps = 16/462 (3%)
Query: 50 IYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTL 109
IY +G++ + + + L+ A ++FD+ +LL + + R+ EA L
Sbjct: 22 IYANGVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFG-FSRDGRTQEAKRL 80
Query: 110 FCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAK 169
F ++ + D V+K +A L G+Q+H K GF D V +SLV Y K
Sbjct: 81 FLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK 140
Query: 170 FGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR----DLFSWTCL 225
GR+VFD M ++++V+W LI GY + + + LF M + + F++
Sbjct: 141 GSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 226 VDGFSKCG----KVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDL 281
+ ++ G +++ + ++ + N++IN Y+K G+V A LFD E++ +
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 282 ITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSY 341
+TWNSMI+GY NG +EAL + +M + V ++++ S + A L L +H
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS 320
Query: 342 IVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAIS-KKKVGHWTAMIVGLGMHGMATQ 400
+VK GF+ D + T L+ YSKC ++ AL +F+ I V WTAMI G + +
Sbjct: 321 VVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 401 ALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLV 460
A+DLF++M R G++P T+ +L A +++ + ++ +Y T+ L+
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVGT--ALL 435
Query: 461 DILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKD 502
D + G +EEA + + + V W ++L+G G +
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTGETE 476
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 232/504 (46%), Gaps = 26/504 (5%)
Query: 12 IHALQQHLPSRLHWNILKFSSTHKET---QQLHALSVKTNLIYHSGISSRLLSLYVDPHI 68
IH L + + ++LK S+T + +QLH +K + + + L+ Y+
Sbjct: 84 IHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKG-- 141
Query: 69 NNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCV 128
+N R +FD ++ ++V + LI Y N + E LTLF + + P++FT
Sbjct: 142 SNFKDGRKVFDE-MKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAA 200
Query: 129 IKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDL 188
+ A G G Q+H +V K G V +SL+++Y K G + R +FD + K +
Sbjct: 201 LGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSV 260
Query: 189 VSWNCLIDGYVKKGEVEVAMKLFDEMP-DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPN 247
V+WN +I GY G A+ +F M + S + C ++ R F +
Sbjct: 261 VTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR--FTEQLH 318
Query: 248 RNLVSW---------NAMINGYMKAGDVDSACELFDDME-IRDLITWNSMIAGYELNGRF 297
++V + A++ Y K + A LF ++ + ++++W +MI+G+ N
Sbjct: 319 CSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGK 378
Query: 298 MEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLL 357
EA++L M V PN+ T L+A L V++ +H+ +VK + +GT L
Sbjct: 379 EEAVDLFSEMKRKGVRPNEFTYSVILTA---LPVISPSE-VHAQVVKTNYERSSTVGTAL 434
Query: 358 IQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTA 417
+ Y K G +E A VF I K + W+AM+ G G A+ +F ++ + G+KP
Sbjct: 435 LDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Query: 418 ITFIGVLNACSHAGL-VNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTI 476
TF +LN C+ + G+++ I ++ ++ L+ + + G +E A+
Sbjct: 495 FTFSSILNVCAATNASMGQGKQFHGFAIKSR-LDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 477 ESMPMRPNFVIWMSLLSGARNHGN 500
+ + + V W S++SG HG
Sbjct: 554 KRQREK-DLVSWNSMISGYAQHGQ 576
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/708 (36%), Positives = 383/708 (54%), Gaps = 60/708 (8%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+ HALS+ T I + + + L+++Y +L AR +FD + +V +N +I+ Y
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMY--SRCRSLSDARKVFDE-MSVWDVVSWNSIIESY 203
Query: 98 VFNQRSHEALTLFCDLLDRF-LLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFD 156
+ AL +F + + F PDN TL V+ A LG GKQ+H +
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 157 KFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPD 216
FV + LV MYAK G +D VF M KD+VSWN ++ GY + G E A++LF++M +
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 217 R----DLFSWTCLVDGFSKCG----KVEIAREIFYRMPNRNLVSW--------------- 253
D+ +W+ + G+++ G + + R++ N V+
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 254 ---------------------------NAMINGYMKAGDVDSACELFDDMEI--RDLITW 284
N +I+ Y K VD+A +FD + RD++TW
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTW 443
Query: 285 NSMIAGYELNGRFMEALELLETMLIGD--VLPNDATLVSALSAVAGLAVLNKGRWMHSYI 342
MI GY +G +ALELL M D PN T+ AL A A LA L G+ +H+Y
Sbjct: 444 TVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYA 503
Query: 343 VKNGF-VVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQA 401
++N V + LI MY+KCGSI A VF + K WT+++ G GMHG +A
Sbjct: 504 LRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 402 LDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVD 461
L +F++M R+G K +T + VL ACSH+G+++ G YFN M +G+ P EHY CLVD
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 462 ILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGC 521
+L R G L A IE MPM P V+W++ LS R HG ++GEYAA + ++A + G
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGS 683
Query: 522 YVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEI 581
Y +LSN+YA AG+W V+ +R +M+ +G +K PG S +E F VGDK+HP EI
Sbjct: 684 YTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEI 743
Query: 582 HSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIR 641
+ L + ++K G+VP+T L ++D+ EK+ L HSE+LA+A+G++ + IR
Sbjct: 744 YQVLLDHMQRIKDIGYVPETGFALHDVDDE-EKDDLLFEHSEKLALAYGILTTPQGAAIR 802
Query: 642 IVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
I KNLRVC DCH+ +S I + +II+RD+SRFHHFKNGSCSCK +W
Sbjct: 803 ITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 276/573 (48%), Gaps = 74/573 (12%)
Query: 55 ISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVL-YNLLIKCYVFNQRSHEALTLFCDL 113
++S L+S Y+ + L +A S+ R + V +N LI+ Y N +++ L LF +
Sbjct: 61 LTSHLISTYIS--VGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM 118
Query: 114 LDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEI 173
PDN+T P V K + +++ G+ H L GF + FV ++LV+MY++ +
Sbjct: 119 HSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSL 178
Query: 174 DLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM-------PD---------- 216
R+VFD M D+VSWN +I+ Y K G+ +VA+++F M PD
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 217 -----------------------RDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSW 253
+++F CLVD ++KCG ++ A +F M +++VSW
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 254 NAMINGYMKAGDVDSACELFDDMEIR----DLITWNSMIAGYELNGRFMEALELLETMLI 309
NAM+ GY + G + A LF+ M+ D++TW++ I+GY G EAL + ML
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 310 GDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIV-------KNGFVVDGVLGTLLIQMYS 362
+ PN+ TL+S LS A + L G+ +H Y + KNG + ++ LI MY+
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 363 KCGSIESALTVFRAISKKK--VGHWTAMIVGLGMHGMATQALDLFNKM----CRMGMKPT 416
KC +++A +F ++S K+ V WT MI G HG A +AL+L ++M C+ +P
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ--TRPN 476
Query: 417 AITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTI 476
A T L AC+ + G++ + + + CL+D+ + G + +A+
Sbjct: 477 AFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVF 536
Query: 477 ESMPMRPNFVIWMSLLSGARNH--GNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAA--A 532
++M M N V W SL++G H G + +G + I D + VVL YA +
Sbjct: 537 DNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVL---YACSHS 592
Query: 533 GQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVL 565
G D+ E MK F PG EH L
Sbjct: 593 GMIDQGMEYFNRMKTV-FGVSPGP---EHYACL 621
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 182/428 (42%), Gaps = 74/428 (17%)
Query: 138 IKEGKQIHGLVFKLGFGFDKFVLSS-LVSMYAKFG----EIDLGRRVFDAMDDKDLVSWN 192
I + K IH + L FG L+S L+S Y G + L RR D + WN
Sbjct: 41 ISQVKLIHQKL--LSFGILTLNLTSHLISTYISVGCLSHAVSLLRRF--PPSDAGVYHWN 96
Query: 193 CLIDGYVKKGEVEVAMKLFDEM------PDRDLFSWTCLVDGFSKCGKVEIAR--EIFYR 244
LI Y G + LF M PD F + F CG++ R E +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFV-----FKACGEISSVRCGESAHA 151
Query: 245 MP-----NRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFME 299
+ N+ NA++ Y + + A ++FD+M + D+++WNS+I Y G+
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 300 ALELLETMLIG-DVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLI 358
ALE+ M P++ TLV+ L A L + G+ +H + V + + + +G L+
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV 271
Query: 359 QMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKM---------- 408
MY+KCG ++ A TVF +S K V W AM+ G G A+ LF KM
Sbjct: 272 DMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVV 331
Query: 409 ---------------------CRM----GMKPTAITFIGVLNACSHAGLVNDGRRY---- 439
CR G+KP +T I VL+ C+ G + G+
Sbjct: 332 TWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYA 391
Query: 440 ----FNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESM-PMRPNFVIWMSLLSG 494
++ N +G E + + L+D+ + ++ A++ +S+ P + V W ++ G
Sbjct: 392 IKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 495 ARNHGNKD 502
HG+ +
Sbjct: 450 YSQHGDAN 457
Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 112/465 (24%), Positives = 196/465 (42%), Gaps = 101/465 (21%)
Query: 33 THKETQQLHALSVKTNLIYHSGISSRLLSLYVD--------------------------- 65
TH +QLH +V + +I + + + L+ +Y
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 66 --PHINNLHYARSIFDRILQHP---SLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLP 120
I A +F+++ + +V ++ I Y +EAL + +L + P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 121 DNFTLPCVIKGAARLGAIKEGKQIHGLVFKL-------GFGFDKFVLSSLVSMYAKFGEI 173
+ TL V+ G A +GA+ GK+IH K G G + V++ L+ MYAK ++
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 174 DLGRRVFDAMD--DKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDL------FSWTCL 225
D R +FD++ ++D+V+W +I GY + G+ A++L EM + D F+ +C
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 226 VDGFSKCGKVEIAREIF-YRMPNRN----LVSWNAMINGYMKAGDVDSACELFDDMEIRD 280
+ + + I ++I Y + N+ L N +I+ Y K G + A +FD+M ++
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 281 LITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHS 340
+TW S++ GY ++G EAL + + M
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMR-------------------------------- 571
Query: 341 YIVKNGFVVDGVLGTLLIQMY--SKCGSIESALTVFRAISKKKVG------HWTAMIVGL 392
+ GF +DGV TLL+ +Y S G I+ + F + K G H+ ++ L
Sbjct: 572 ---RIGFKLDGV--TLLVVLYACSHSGMIDQGMEYFNRM-KTVFGVSPGPEHYACLVDLL 625
Query: 393 GMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGR 437
G G AL L + M M+P + ++ L+ C G V G
Sbjct: 626 GRAGRLNAALRLIEE---MPMEPPPVVWVAFLSCCRIHGKVELGE 667
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 232/535 (43%), Positives = 322/535 (60%), Gaps = 2/535 (0%)
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
D F + ++S Y + + + FD M KD SWN +I GY ++GE+E A +LF M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 216 DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDD 275
+++ SW ++ G+ +CG +E A F P R +V+W AMI GYMKA V+ A +F D
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKD 242
Query: 276 MEI-RDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNK 334
M + ++L+TWN+MI+GY N R + L+L ML + PN + L SAL + L+ L
Sbjct: 243 MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL 302
Query: 335 GRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGM 394
GR +H + K+ D T LI MY KCG + A +F + KK V W AMI G
Sbjct: 303 GRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQ 362
Query: 395 HGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIE 454
HG A +AL LF +M ++P ITF+ VL AC+HAGLVN G YF M+ DY +EP +
Sbjct: 363 HGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPD 422
Query: 455 HYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKV 514
HY C+VD+L R G LEEA I SMP RP+ ++ +LL R H N ++ E+AA L+++
Sbjct: 423 HYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQL 482
Query: 515 APDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKS 574
YV L+NIYA+ +W+ V+ VR+ MK+ K PG S IE R +H F D+
Sbjct: 483 NSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRI 542
Query: 575 HPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINV 634
HP+ D IH KL E+ K+K AG+ P+ L +E++ +KE L HSE+LA+AFG I +
Sbjct: 543 HPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEE-QKEKLLLWHSEKLAVAFGCIKL 601
Query: 635 KSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
S I++ KNLR+C DCH K +S I REIIVRD +RFHHFK+GSCSC D+W
Sbjct: 602 PQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 184 DDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSK-CGKVEIAREIF 242
D + N +I V+ G+++ A+++F M ++ +W L+ G SK ++ A ++F
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF 116
Query: 243 YRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALE 302
+P + S+N M++ Y++ + + A FD M +D +WN+MI GY G +A E
Sbjct: 117 DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARE 176
Query: 303 LLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYS 362
L +M+ N+ + + +S L K S+ K V V T +I Y
Sbjct: 177 LFYSMM----EKNEVSWNAMISGYIECGDLEKA----SHFFKVAPVRGVVAWTAMITGYM 228
Query: 363 KCGSIESALTVFRAIS-KKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFI 421
K +E A +F+ ++ K + W AMI G + L LF M G++P +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 422 GVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPM 481
L CS + GR+ + +++ + + L+ + C+ G L +A E M
Sbjct: 289 SALLGCSELSALQLGRQ-IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK- 346
Query: 482 RPNFVIWMSLLSGARNHGNKDIGEYAANNLI--KVAPDTIGCYVVL 525
+ + V W +++SG HGN D +I K+ PD I VL
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVL 392
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 9/215 (4%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
A ++F + + +LV +N +I YV N R + L LF +L+ + P++ L + G +
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
L A++ G+QIH +V K D L+SL+SMY K GE+ ++F+ M KD+V+WN
Sbjct: 296 ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNA 355
Query: 194 LIDGYVKKGEVEVAMKLFDEMPDRDLF-SWTCLVDGFSKC---GKVEIAREIFYRMPNRN 249
+I GY + G + A+ LF EM D + W V C G V I F M
Sbjct: 356 MISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDY 415
Query: 250 LVS-----WNAMINGYMKAGDVDSACELFDDMEIR 279
V + M++ +AG ++ A +L M R
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFR 450
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 248/702 (35%), Positives = 384/702 (54%), Gaps = 49/702 (6%)
Query: 2 QTQTLQHSSPIHALQQHLPSRLHWNILKFSSTHKETQQL---HALSVKTNLIYHSGISSR 58
Q++ + S P L Q P + + + T+ + + L H+ + +L +S + +
Sbjct: 20 QSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVK 79
Query: 59 LLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFL 118
L+ Y + ++ AR +FD I + ++++ N++I+ YV N E + +F + +
Sbjct: 80 LMRAYAS--LKDVASARKVFDEIPER-NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNV 136
Query: 119 LPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRR 178
PD++T PCV+K + G I G++IHG K+G FV + LVSMY K G + R
Sbjct: 137 RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARL 196
Query: 179 VFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIA 238
V D EM RD+ SW LV G+++ + + A
Sbjct: 197 VLD-------------------------------EMSRRDVVSWNSLVVGYAQNQRFDDA 225
Query: 239 REIFYRMPNRNLVSWNAMINGYMKA------GDVDSACELFDDMEIRDLITWNSMIAGYE 292
E+ M + + + + A +V ++F M + L++WN MI Y
Sbjct: 226 LEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYM 285
Query: 293 LNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGV 352
N +EA+EL M P+ ++ S L A + L+ G+ +H YI + + + +
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLL 345
Query: 353 LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG 412
L LI MY+KCG +E A VF + + V WTAMI G G A+ LF+K+ G
Sbjct: 346 LENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSG 405
Query: 413 MKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEA 472
+ P +I F+ L ACSHAGL+ +GR F +M + Y I P +EH C+VD+L R G ++EA
Sbjct: 406 LVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEA 465
Query: 473 KSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAA 532
I+ M M PN +W +LL R H + DIG AA+ L ++AP+ G YV+LSNIYA A
Sbjct: 466 YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKA 525
Query: 533 GQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKL 592
G+W++V+ +R +MK +G +K+PG+S++E ++H F+VGD+SHPQ+DEI+ +L + K+
Sbjct: 526 GRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKM 585
Query: 593 KAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVK-----SRSPIRIVKNLR 647
K G+VPD+ L +E++ +KE L HSE+LAI F L+N K S + IRI KNLR
Sbjct: 586 KELGYVPDSESALHDVEEE-DKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLR 644
Query: 648 VCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+C DCH KL+S I +REII+RD +RFH F+ G CSC D+W
Sbjct: 645 ICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/618 (36%), Positives = 367/618 (59%), Gaps = 12/618 (1%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
AR +FD ++ ++V + L+K YV N + A +LF + ++ + + ++ G
Sbjct: 98 ARKVFD-LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFL 152
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
+ G I + +++ ++ D +S++ K G +D R +FD M ++ +++W
Sbjct: 153 QDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT 208
Query: 194 LIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSW 253
++ GY + V+ A K+FD MP++ SWT ++ G+ + G++E A E+F MP + +++
Sbjct: 209 MVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIAC 268
Query: 254 NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
NAMI+G + G++ A +FD M+ R+ +W ++I +E NG +EAL+L M V
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVR 328
Query: 314 PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTV 373
P TL+S LS A LA L+ G+ +H+ +V+ F VD + ++L+ MY KCG + + +
Sbjct: 329 PTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLI 388
Query: 374 FRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG-MKPTAITFIGVLNACSHAGL 432
F K + W ++I G HG+ +AL +F +M G KP +TF+ L+ACS+AG+
Sbjct: 389 FDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGM 448
Query: 433 VNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLL 492
V +G + + M + +G++P HY C+VD+L R G EA I+SM + P+ +W SLL
Sbjct: 449 VEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 493 SGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRK 552
R H D+ E+ A LI++ P+ G Y++LSN+YA+ G+W V+E+R++MK R RK
Sbjct: 509 GACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRK 568
Query: 553 DPGSSSIEHRGVLHEFVVGD-KSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQ 611
PG S E +H F G SHP+ + I L E+ L+ AG+ PD + L + D+
Sbjct: 569 SPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDV-DE 627
Query: 612 KEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRD 671
+EK L+ HSERLA+A+ L+ + PIR++KNLRVC+DCH+ K++S + REII+RD
Sbjct: 628 EEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRD 687
Query: 672 NSRFHHFKNGSCSCKDFW 689
+RFHHF+NG CSCKD+W
Sbjct: 688 ANRFHHFRNGECSCKDYW 705
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 205/411 (49%), Gaps = 58/411 (14%)
Query: 133 ARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDL---GRRVFDAMDDKDLV 189
+R+G I E + KL D +SS SM A + + R++FD M D++++
Sbjct: 28 SRIGKIHEAR-------KLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 190 SWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRN 249
SWN L+ GY+K GE++ A K+FD MP+R++ SWT LV G+ GKV++A +F++MP +N
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN 140
Query: 250 LVSWNAMINGYMKAGDVDSAC-------------------------------ELFDDMEI 278
VSW M+ G+++ G +D AC E+FD+M
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 279 RDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWM 338
R +ITW +M+ GY N R +A ++ DV+P + T VS S + G + GR
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIF------DVMP-EKTEVSWTSMLMGY--VQNGRIE 251
Query: 339 HSYIVKNGFVVDGVLG-TLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGM 397
+ + V V+ +I + G I A VF ++ ++ W +I +G
Sbjct: 252 DAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGF 311
Query: 398 ATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIN-DYGIEPTIEHY 456
+ALDLF M + G++PT T I +L+ C+ ++ G++ ++ + ++ +
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA-- 369
Query: 457 GCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYA 507
L+ + + G L ++K + P + + ++W S++SG +HG +GE A
Sbjct: 370 SVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG---LGEEA 416
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 119/293 (40%), Gaps = 54/293 (18%)
Query: 254 NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
N I + G + A +LFD + + + +WNSM+AGY N +A +L + M
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------ 74
Query: 314 PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTV 373
D ++S W NG L+ Y K G I+ A V
Sbjct: 75 -PDRNIIS---------------W-------NG----------LVSGYMKNGEIDEARKV 101
Query: 374 FRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLV 433
F + ++ V WTA++ G +G A LF KM + IG L G +
Sbjct: 102 FDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFL----QDGRI 157
Query: 434 NDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLS 493
+D + + M+ + I T +G LC+ G ++EA+ + M R + + W ++++
Sbjct: 158 DDACKLYEMIPDKDNIARTSMIHG-----LCKEGRVDEAREIFDEMSER-SVITWTTMVT 211
Query: 494 GARNHGNKDIGEYAANNLIKVAPD-TIGCYVVLSNIYAAAGQWDKVSEVREMM 545
G + D A + V P+ T + + Y G+ + E+ E+M
Sbjct: 212 GYGQNNRVD----DARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM 260
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/669 (36%), Positives = 386/669 (57%), Gaps = 30/669 (4%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
QQ+H +++K L +S+ L+++Y + +AR++FD + + L+ +N +I
Sbjct: 335 QQVHCMALKLGLDLMLTVSNSLINMYC--KLRKFGFARTVFDNMSER-DLISWNSVIAGI 391
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLG-AIKEGKQIHGLVFKLGFGFD 156
N EA+ LF LL L PD +T+ V+K A+ L + KQ+H K+ D
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 157 KFVLSSLVSMYA-----KFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLF 211
FV ++L+ Y+ K EI R FD LV+WN ++ GY + + +KLF
Sbjct: 452 SFVSTALIDAYSRNRCMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 212 DEMPDR----DLFSWTCLVDGFSKCG---KVEIAREI--FYRMPNRNLVSW--NAMINGY 260
M + D F+ L F CG + +++ + +L W + +++ Y
Sbjct: 506 ALMHKQGERSDDFT---LATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMY 562
Query: 261 MKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLV 320
+K GD+ +A FD + + D + W +MI+G NG A + M + VLP++ T+
Sbjct: 563 VKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIA 622
Query: 321 SALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKK 380
+ A + L L +GR +H+ +K D +GT L+ MY+KCGSI+ A +F+ I
Sbjct: 623 TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMM 682
Query: 381 KVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYF 440
+ W AM+VGL HG + L LF +M +G+KP +TFIGVL+ACSH+GLV++ ++
Sbjct: 683 NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHM 742
Query: 441 NMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGN 500
M DYGI+P IEHY CL D L R G +++A++ IESM M + ++ +LL+ R G+
Sbjct: 743 RSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Query: 501 KDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIE 560
+ G+ A L+++ P YV+LSN+YAAA +WD++ R MMK +KDPG S IE
Sbjct: 803 TETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Query: 561 HRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELEN 620
+ +H FVV D+S+ QT+ I+ K+ +M +K G+VP+T L+ +E++ EKE L
Sbjct: 863 VKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEE-EKERALYY 921
Query: 621 HSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKN 680
HSE+LA+AFGL++ +PIR++KNLRVC DCH+ K ++ +YNREI++RD +RFH FK+
Sbjct: 922 HSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKD 981
Query: 681 GSCSCKDFW 689
G CSC D+W
Sbjct: 982 GICSCGDYW 990
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 224/484 (46%), Gaps = 23/484 (4%)
Query: 97 YVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFD 156
Y+ + + L F D+++ + D T ++ A ++ ++ G+Q+H + KLG
Sbjct: 290 YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLM 349
Query: 157 KFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKG-EVEVA---MKLFD 212
V +SL++MY K + R VFD M ++DL+SWN +I G + G EVE M+L
Sbjct: 350 LTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLR 409
Query: 213 EMPDRDLFSWTCLVDGFSKCGK-VEIAREIFYRMPNRNLVS----WNAMINGYMKAGDVD 267
D ++ T ++ S + + +++++ N VS A+I+ Y + +
Sbjct: 410 CGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMK 469
Query: 268 SACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVA 327
A LF+ DL+ WN+M+AGY + + L+L M +D TL +
Sbjct: 470 EAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 328 GLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTA 387
L +N+G+ +H+Y +K+G+ +D + + ++ MY KCG + +A F +I WT
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 388 MIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRR-YFNMMIND 446
MI G +G +A +F++M MG+ P T + A S + GR+ + N + +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 447 YGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGN--KDIG 504
+P + LVD+ + G +++A + + M N W ++L G HG + +
Sbjct: 649 CTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQ 705
Query: 505 EYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPG-SSSIEHRG 563
+ + + PD + VLS A VSE + M R D G IEH
Sbjct: 706 LFKQMKSLGIKPDKVTFIGVLS----ACSHSGLVSEAYKHM--RSMHGDYGIKPEIEHYS 759
Query: 564 VLHE 567
L +
Sbjct: 760 CLAD 763
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 141/578 (24%), Positives = 245/578 (42%), Gaps = 75/578 (12%)
Query: 59 LLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRS-----HEALTLFCDL 113
L+S+Y +L YAR +FD+ + LV +N ++ Y + +A LF L
Sbjct: 80 LISMY--SKCGSLTYARRVFDK-MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRIL 136
Query: 114 LDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEI 173
+ TL ++K G + + HG K+G D+FV +LV++Y KFG++
Sbjct: 137 RQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 174 DLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCG 233
G+ +F+ M +D+V WN ++ Y++ G E A+ L L
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGL-------------- 242
Query: 234 KVEIAREIFYRMPNRNLVSWNAMING-YMKAGDVDSACELFDDMEIRDLITWNSMIAGYE 292
PN + A I+G AG V S D + ++I N ++ Y
Sbjct: 243 -----------NPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 293 LNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGV 352
+G++ L+ M+ DV + T + L+ + L G+ +H +K G +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 353 LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG 412
+ LI MY K A TVF +S++ + W ++I G+ +G+ +A+ LF ++ R G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 413 MKPTAITFIGVLNACSH--AGLVNDGRRYFNMM----INDYGIEPTIEHYGCLVDILCRT 466
+KP T VL A S GL + + + + ++D + L+D R
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTA------LIDAYSRN 465
Query: 467 GYLEEAKSTIESMPMRPNF--VIWMSLLSG-ARNH-GNKDIGEYAANNLIKVAPDTIGCY 522
++EA+ E R NF V W ++++G ++H G+K + +A + D
Sbjct: 466 RCMKEAEILFE----RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF--- 518
Query: 523 VVLSNIYAAAG---QWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFV-VGDKSHPQT 578
L+ ++ G ++ +V K G+ D SS G+L +V GD S Q
Sbjct: 519 -TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS----GILDMYVKCGDMSAAQF 573
Query: 579 DEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEA 616
+ + V TT + CIE+ +E+ A
Sbjct: 574 ---------AFDSIPVPDDVAWTTMISGCIENGEEERA 602
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/733 (33%), Positives = 389/733 (53%), Gaps = 84/733 (11%)
Query: 36 ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIK 95
+T Q HA +K+ IS++L++ Y + N + A + I P++ ++ LI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASY--SNYNCFNDADLVLQSI-PDPTIYSFSSLIY 89
Query: 96 CYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGF 155
+ +++ +F + L+PD+ LP + K A L A K GKQIH + G
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
D FV S+ MY + G + R+VFD M DKD+V+ + L+ Y +KG +E +++ EM
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 216 ----DRDLFSWTCLVDGFSKCGKVEIAREIFYRM------PNRNLVS------------- 252
+ ++ SW ++ GF++ G + A +F ++ P++ VS
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 253 --------------------WNAMINGYMKAGD--------------------------- 265
+AMI+ Y K+G
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 266 ----VDSACELFD-----DMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPND 316
VD A E+F+ ME+ ++++W S+IAG NG+ +EALEL M + V PN
Sbjct: 330 RNGLVDKALEMFELFKEQTMEL-NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 317 ATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRA 376
T+ S L A +A L GR H + V+ + + +G+ LI MY+KCG I + VF
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 377 ISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDG 436
+ K + W +++ G MHG A + + +F + R +KP I+F +L+AC GL ++G
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 437 RRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGAR 496
+YF MM +YGI+P +EHY C+V++L R G L+EA I+ MP P+ +W +LL+ R
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCR 568
Query: 497 NHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGS 556
N D+ E AA L + P+ G YV+LSNIYAA G W +V +R M+ G +K+PG
Sbjct: 569 LQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGC 628
Query: 557 SSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEA 616
S I+ + ++ + GDKSHPQ D+I K+ E+ +++ +GH P+ L +E+Q E+E
Sbjct: 629 SWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQ-EQEQ 687
Query: 617 ELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFH 676
L HSE+LA+ FGL+N +P++++KNLR+C DCH+V K +S REI +RD +RFH
Sbjct: 688 MLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFH 747
Query: 677 HFKNGSCSCKDFW 689
HFK+G CSC DFW
Sbjct: 748 HFKDGICSCGDFW 760
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/571 (39%), Positives = 344/571 (60%), Gaps = 18/571 (3%)
Query: 135 LGAIKEGKQIHGLVFKLGFGFD-----KFVLSSLVSMYAKFGEIDLGRRVFDAMDDK-DL 188
+ +I + +QIH + G K ++ LVS+ + + +VF ++ ++
Sbjct: 27 VSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKIEKPINV 85
Query: 189 VSWNCLIDGYVKKGEVEVAMKLFDEMP-----DRDLFSWTCLVDGFSKCGKVEIAREIFY 243
WN LI GY + G A L+ EM + D ++ L+ + V + I
Sbjct: 86 FIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHS 145
Query: 244 RMPNRNLVSW----NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFME 299
+ S N++++ Y GDV SA ++FD M +DL+ WNS+I G+ NG+ E
Sbjct: 146 VVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEE 205
Query: 300 ALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQ 359
AL L M + P+ T+VS LSA A + L G+ +H Y++K G + +L+
Sbjct: 206 ALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLD 265
Query: 360 MYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKM-CRMGMKPTAI 418
+Y++CG +E A T+F + K WT++IVGL ++G +A++LF M G+ P I
Sbjct: 266 LYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 419 TFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIES 478
TF+G+L ACSH G+V +G YF M +Y IEP IEH+GC+VD+L R G +++A I+S
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS 385
Query: 479 MPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKV 538
MPM+PN VIW +LL HG+ D+ E+A ++++ P+ G YV+LSN+YA+ +W V
Sbjct: 386 MPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDV 445
Query: 539 SEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHV 598
++R+ M + G +K PG S +E +HEF++GDKSHPQ+D I++KL EM +L++ G+V
Sbjct: 446 QKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYV 505
Query: 599 PDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKL 658
P + V + +E++ EKE + HSE++AIAF LI+ RSPI +VKNLRVC DCH KL
Sbjct: 506 PQISNVYVDVEEE-EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKL 564
Query: 659 LSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+S +YNREI+VRD SRFHHFKNGSCSC+D+W
Sbjct: 565 VSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 199/417 (47%), Gaps = 55/417 (13%)
Query: 32 STHKETQQLHALSVKTNL-IYHSGISSRLLSLYVD-PHINNLHYARSIFDRILQHPSLVL 89
S+ + +Q+HA S++ + I + + L+ V P + YA +F +I + ++ +
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 90 YNLLIKCYVFNQRSHEALTLFCDL-LDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLV 148
+N LI+ Y S A +L+ ++ + + PD T P +IK + ++ G+ IH +V
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 149 FKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAM 208
+ GFG +V +SL+ +YA G++ +VFD M +KDLV+WN +I+G+ + G+ E A+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 209 KLFDEMPDR----DLFSWTCLVDGFSKCGKVEIAREIFYRMP----NRNLVSWNAMINGY 260
L+ EM + D F+ L+ +K G + + + + M RNL S N +++ Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 261 MKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGD-VLPNDATL 319
+ G V+ A LFD+M ++ ++W S+I G +NG EA+EL + M + +LP + T
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 320 VSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISK 379
V L A S CG ++ FR + +
Sbjct: 328 VGILYAC-----------------------------------SHCGMVKEGFEYFRRMRE 352
Query: 380 K-----KVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAG 431
+ ++ H+ M+ L G +A + M M+P + + +L AC+ G
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKS---MPMQPNVVIWRTLLGACTVHG 406
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/688 (36%), Positives = 373/688 (54%), Gaps = 74/688 (10%)
Query: 73 YARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDR-----FLLPDNFTLPC 127
YAR +FDRI Q P+L +N L+ Y E + F L DR +L + ++L
Sbjct: 59 YARRVFDRIPQ-PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSG 117
Query: 128 VIKGAARL---------------------------GAIKEGKQIHGLVFKLGFGFDKFVL 160
++ A + G + GKQIHG V KLGF V
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 161 SSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLF 220
S L+ MYA G I ++VF +DD++ V +N L+ G + G +E A++LF M ++D
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSV 236
Query: 221 SWTCLVDGFSKCGKVEIAREIFYRMPNRNL------------------------------ 250
SW ++ G ++ G + A E F M + L
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 251 ---------VSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEAL 301
+A+I+ Y K + A +FD M+ +++++W +M+ GY GR EA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 302 ELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMY 361
++ M + P+ TL A+SA A ++ L +G H + +G + + L+ +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 362 SKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFI 421
KCG I+ + +F ++ + WTAM+ G A + + LF+KM + G+KP +T
Sbjct: 417 GKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLT 476
Query: 422 GVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPM 481
GV++ACS AGLV G+RYF +M ++YGI P+I HY C++D+ R+G LEEA I MP
Sbjct: 477 GVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPF 536
Query: 482 RPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEV 541
P+ + W +LLS RN GN +IG++AA +LI++ P Y +LS+IYA+ G+WD V+++
Sbjct: 537 PPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQL 596
Query: 542 REMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDT 601
R M+++ +K+PG S I+ +G LH F D+S P D+I++KL E+ NK+ G+ PDT
Sbjct: 597 RRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDT 656
Query: 602 TQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSG 661
+ V +E + K L HSERLAIAFGLI V S PIR+ KNLRVC DCH+ TK +S
Sbjct: 657 SFVHHDVE-EAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISS 715
Query: 662 IYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+ REI+VRD RFH FK+G+CSC DFW
Sbjct: 716 VTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 37/322 (11%)
Query: 214 MPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELF 273
+P + F + +V ++ AR +F R+P NL SWN ++ Y KAG + F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 274 DDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPN--DATLVSALSAVAGLAV 331
+ + RD +TWN +I GY L+G A++ TM+ D N TL++ L +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGH 154
Query: 332 LNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSK---------------------------- 363
++ G+ +H ++K GF ++G+ L+ MY+
Sbjct: 155 VSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGG 214
Query: 364 ---CGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITF 420
CG IE AL +FR + K V W AMI GL +G+A +A++ F +M G+K F
Sbjct: 215 LLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPF 273
Query: 421 IGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMP 480
VL AC G +N+G++ +I + I L+D+ C+ L AK+ + M
Sbjct: 274 GSVLPACGGLGAINEGKQIHACIIRT-NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMK 332
Query: 481 MRPNFVIWMSLLSGARNHGNKD 502
+ N V W +++ G G +
Sbjct: 333 QK-NVVSWTAMVVGYGQTGRAE 353
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 156/313 (49%), Gaps = 21/313 (6%)
Query: 36 ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIK 95
E +Q+HA ++TN H + S L+ +Y LHYA+++FDR+ Q ++V + ++
Sbjct: 288 EGKQIHACIIRTNFQDHIYVGSALIDMYCK--CKCLHYAKTVFDRMKQK-NVVSWTAMVV 344
Query: 96 CYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGF 155
Y R+ EA+ +F D+ + PD++TL I A + +++EG Q HG G
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP 215
V +SLV++Y K G+ID R+F+ M+ +D VSW ++ Y + G ++LFD+M
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 216 DRDL----FSWTCLVDGFSKCGKVEIAREIFYRMPNR-----NLVSWNAMINGYMKAGDV 266
L + T ++ S+ G VE + F M + ++ ++ MI+ + ++G +
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 267 DSACELFDDMEI-RDLITWNSMIAGYELNGRFMEALELLETMLIGDV-LPNDATLVSALS 324
+ A + M D I W ++++ G E+++ D P TL+S++
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Query: 325 AVAGLAVLNKGRW 337
A +KG+W
Sbjct: 585 A-------SKGKW 590
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 37/254 (14%)
Query: 32 STHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYN 91
S+ +E Q H ++ + LI++ +S+ L++LY ++ + +F+ + V +
Sbjct: 385 SSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY--GKCGDIDDSTRLFNE-MNVRDAVSWT 441
Query: 92 LLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKL 151
++ Y R+ E + LF ++ L PD TL VI +R G +++G++ FKL
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR----YFKL 497
Query: 152 GFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLF 211
M +++G + + ++C+ID + + G +E AM+
Sbjct: 498 --------------MTSEYGIV------------PSIGHYSCMIDLFSRSGRLEEAMRFI 531
Query: 212 DEMP-DRDLFSWTCLVDGFSKCGKVEI---AREIFYRMPNRNLVSWNAMINGYMKAGDVD 267
+ MP D WT L+ G +EI A E + + + + + Y G D
Sbjct: 532 NGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWD 591
Query: 268 SACELFDDMEIRDL 281
S +L M +++
Sbjct: 592 SVAQLRRGMREKNV 605
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 233/579 (40%), Positives = 345/579 (59%), Gaps = 36/579 (6%)
Query: 142 KQIHGLVFKLGFGFDK---FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGY 198
KQ+H + + + F+ ++ + + F +++ RVFD++++ WN LI
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 199 VKK-GEVEVAMKLFDEM-------PDRDLFSWT----CLVDGFSKCGKV--EIAREIFYR 244
E A L+ +M PD+ F + + GFS+ +V +I + F
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGF-- 182
Query: 245 MPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELL 304
++ N +I+ Y G +D A ++FD+M R L++WNSMI G + AL+L
Sbjct: 183 --GGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 240
Query: 305 ETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFV---VDGVLGTLLIQMY 361
M P+ T+ S LSA AGL L+ G W H+++++ V +D ++ LI+MY
Sbjct: 241 REMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMY 299
Query: 362 SKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMC--RMGMKPTAIT 419
KCGS+ A VF+ + K+ + W AMI+G HG A +A++ F++M R ++P ++T
Sbjct: 300 CKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVT 359
Query: 420 FIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESM 479
F+G+L AC+H G VN GR+YF+MM+ DY IEP +EHYGC+VD++ R GY+ EA + SM
Sbjct: 360 FVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSM 419
Query: 480 PMRPNFVIWMSLLSGARNHGNK-DIGEYAANNLIKVAPDT-------IGCYVVLSNIYAA 531
PM+P+ VIW SLL G ++ E A N+I D G YV+LS +YA+
Sbjct: 420 PMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYAS 479
Query: 532 AGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNK 591
A +W+ V VR++M + G RK+PG SSIE G+ HEF GD SHPQT +I+ +L + ++
Sbjct: 480 ASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDR 539
Query: 592 LKAAGHVPDTTQV-LLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCN 650
L++ G++PD +Q L+ + KE L HSERLAIAFGLIN+ ++PIRI KNLRVCN
Sbjct: 540 LRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCN 599
Query: 651 DCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
DCH VTKL+S ++N EIIVRD RFHHFK+GSCSC D+W
Sbjct: 600 DCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/478 (26%), Positives = 196/478 (41%), Gaps = 122/478 (25%)
Query: 12 IHALQQHLPS----------RLHWNILKFSST---HKETQQLHALSVKTNLIYHSGISSR 58
+H L H+P H I + T + +QLHA +++T Y ++
Sbjct: 26 VHPLSPHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTT--YPEEPATL 83
Query: 59 LLS---LYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLD 115
L L + ++++YA +FD I H S + L+ C R EA L+ +L+
Sbjct: 84 FLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLE 143
Query: 116 RF-LLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEID 174
R PD T P V+K A + EGKQ+H + K GFG D +V + L+ +Y G +D
Sbjct: 144 RGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLD 203
Query: 175 LGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM-----PD------------- 216
L R+VFD M ++ LVSWN +ID V+ GE + A++LF EM PD
Sbjct: 204 LARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAG 263
Query: 217 -----------------------RDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSW 253
D+ L++ + KCG + +A ++F M R+L SW
Sbjct: 264 LGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASW 323
Query: 254 NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
NAMI G+ G + A FD R ++ E +V
Sbjct: 324 NAMILGFATHGRAEEAMNFFD---------------------RMVDKRE--------NVR 354
Query: 314 PNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTV 373
PN T V L A +NKGR +V++ IE AL
Sbjct: 355 PNSVTFVGLLIACNHRGFVNKGRQYFDMMVRD-------------------YCIEPALE- 394
Query: 374 FRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAG 431
H+ ++ + G T+A+D+ + M MKP A+ + +L+AC G
Sbjct: 395 ----------HYGCIVDLIARAGYITEAIDM---VMSMPMKPDAVIWRSLLDACCKKG 439
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/656 (36%), Positives = 375/656 (57%), Gaps = 30/656 (4%)
Query: 55 ISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLL 114
+ L+ ++V N+ A +FD+ + ++V + L+I + EA+ F D++
Sbjct: 204 VGCSLIDMFVKGE-NSFENAYKVFDK-MSELNVVTWTLMITRCMQMGFPREAIRFFLDMV 261
Query: 115 DRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKF---G 171
D FTL V A L + GKQ+H + G D V SLV MYAK G
Sbjct: 262 LSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADG 319
Query: 172 EIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEV-AMKLFDEM-------PDRDLFSWT 223
+D R+VFD M+D ++SW LI GY+K + A+ LF EM P+ FS
Sbjct: 320 SVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFS-- 377
Query: 224 CLVDGFSKCGKV---EIAREIFYRMPNRNLVS----WNAMINGYMKAGDVDSACELFDDM 276
F CG + + +++ + R L S N++I+ ++K+ ++ A F+ +
Sbjct: 378 ---SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 277 EIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGR 336
++L+++N+ + G N F +A +LL + ++ + T S LS VA + + KG
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 337 WMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHG 396
+HS +VK G + + LI MYSKCGSI++A VF + + V WT+MI G HG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 397 MATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHY 456
A + L+ FN+M G+KP +T++ +L+ACSH GLV++G R+FN M D+ I+P +EHY
Sbjct: 555 FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY 614
Query: 457 GCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAP 516
C+VD+LCR G L +A I +MP + + ++W + L R H N ++G+ AA ++++ P
Sbjct: 615 ACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP 674
Query: 517 DTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHP 576
+ Y+ LSNIYA AG+W++ +E+R MK+R K+ G S IE +H+F VGD +HP
Sbjct: 675 NEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHP 734
Query: 577 QTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAE---LENHSERLAIAFGLIN 633
+I+ +L + ++K G+VPDT VL +E++ ++ + L HSE++A+AFGLI+
Sbjct: 735 NAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLIS 794
Query: 634 VKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
P+R+ KNLRVC DCH+ K +S + REI++RD +RFHHFK+G CSC D+W
Sbjct: 795 TSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 122 bits (306), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 214/486 (44%), Gaps = 66/486 (13%)
Query: 121 DNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVF 180
D+ T ++K R + GK +H + + D + +SL+S+Y+K G+ VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 181 DAM---DDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDL----FSWTCLVDGFSKCG 233
+ M +D+VSW+ ++ Y G A+K+F E + L + +T ++ S
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 234 KVEIAR-EIFYRMPNRNLVS----WNAMINGYMKA-GDVDSACELFDDMEIRDLITWNSM 287
V + R + + M + S ++I+ ++K ++A ++FD M +++TW M
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLM 240
Query: 288 IAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGF 347
I G EA+ M++ + TL S SA A L L+ G+ +HS+ +++G
Sbjct: 241 ITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 348 VVDGVLGTLLIQMYSKC---GSIESALTVFRAISKKKVGHWTAMIVG-LGMHGMATQALD 403
V D + L+ MY+KC GS++ VF + V WTA+I G + +AT+A++
Sbjct: 301 VDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAIN 358
Query: 404 LFNKMCRMG-MKPTAITFIGVLNAC----------------------SHAGLVN------ 434
LF++M G ++P TF AC S++ + N
Sbjct: 359 LFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMF 418
Query: 435 -------DGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRP---N 484
D +R F + E + Y +D CR E+A + + R +
Sbjct: 419 VKSDRMEDAQRAFESL-----SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVS 473
Query: 485 FVIWMSLLSGARNHGNKDIGEYAANNLIK--VAPDTIGCYVVLSNIYAAAGQWDKVSEVR 542
+ SLLSG N G+ GE + ++K ++ + C ++S +Y+ G D S V
Sbjct: 474 AFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS-MYSKCGSIDTASRVF 532
Query: 543 EMMKKR 548
M+ R
Sbjct: 533 NFMENR 538
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/535 (22%), Positives = 224/535 (41%), Gaps = 83/535 (15%)
Query: 40 LHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFD--RILQHPSLVLYNLLIKCY 97
+HA ++ ++ S + + L+SLY + A +F+ R +V ++ ++ CY
Sbjct: 84 VHARLIEFDIEPDSVLYNSLISLYSKS--GDSAKAEDVFETMRRFGKRDVVSWSAMMACY 141
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLG-FGFD 156
N R +A+ +F + L+ L+P+++ VI+ + + G+ G + K G F D
Sbjct: 142 GNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESD 201
Query: 157 KFVLSSLVSMYAKFGE--IDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
V SL+ M+ K GE + +VFD M + ++V+W +I ++ G A++ F +M
Sbjct: 202 VCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 215 P--------------------------DRDLFSWT-----------CLVDGFSKC---GK 234
+ L SW LVD ++KC G
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGS 320
Query: 235 VEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELN 294
V+ R++F RM + +++SW A+I GYMK ++ +
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT-------------------------- 354
Query: 295 GRFMEALELLETMLI-GDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVL 353
EA+ L M+ G V PN T SA A L+ G+ + K G + +
Sbjct: 355 ----EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSV 410
Query: 354 GTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGM 413
+I M+ K +E A F ++S+K + + + G + QA L +++ +
Sbjct: 411 ANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITEREL 470
Query: 414 KPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAK 473
+A TF +L+ ++ G + G + + ++ G+ L+ + + G ++ A
Sbjct: 471 GVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTAS 529
Query: 474 STIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIK--VAPDTIGCYVVLS 526
M R N + W S+++G HG N +I+ V P+ + +LS
Sbjct: 530 RVFNFMENR-NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILS 583
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/254 (18%), Positives = 105/254 (41%), Gaps = 41/254 (16%)
Query: 35 KETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94
++ +Q+H+ VK L + + + L+S+Y ++ A +F+ +++ +++ + +I
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMY--SKCGSIDTASRVFN-FMENRNVISWTSMI 547
Query: 95 KCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
+ + + L F +++ + P+ T ++ + +G + EG +
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWR----------- 596
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
SMY D + + C++D + G + A + + M
Sbjct: 597 -------HFNSMYE------------DHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 215 P-DRDLFSW-----TCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDS 268
P D+ W C V ++ GK+ AR+I PN ++ + N Y AG +
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLA-ARKILELDPNEP-AAYIQLSNIYACAGKWEE 695
Query: 269 ACELFDDMEIRDLI 282
+ E+ M+ R+L+
Sbjct: 696 STEMRRKMKERNLV 709
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/474 (44%), Positives = 304/474 (64%), Gaps = 1/474 (0%)
Query: 216 DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDD 275
D D T L+ +++ G ++ ++F +P + V AM+ + GDV A +LF+
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 276 MEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKG 335
M RD I WN+MI+GY G EAL + M + V N ++S LSA L L++G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 336 RWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMH 395
RW HSYI +N + L T L+ +Y+KCG +E A+ VF + +K V W++ + GL M+
Sbjct: 260 RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMN 319
Query: 396 GMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEH 455
G + L+LF+ M + G+ P A+TF+ VL CS G V++G+R+F+ M N++GIEP +EH
Sbjct: 320 GFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH 379
Query: 456 YGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVA 515
YGCLVD+ R G LE+A S I+ MPM+P+ +W SLL +R + N ++G A+ ++++
Sbjct: 380 YGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELE 439
Query: 516 PDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSH 575
G YV+LSNIYA + WD VS VR+ MK +G RK PG S +E G +HEF VGDKSH
Sbjct: 440 TANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Query: 576 PQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVK 635
P+ +I + ++ +L+ AG+ DTT V+ I D++EKE L HSE+ AIAFG++++K
Sbjct: 500 PKYTQIDAVWKDISRRLRLAGYKADTTPVMFDI-DEEEKEDALCLHSEKAAIAFGIMSLK 558
Query: 636 SRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
PIRIVKNLRVC DCH V+ ++S I+NREIIVRD +RFHHFK+G CSC FW
Sbjct: 559 EDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 189/402 (47%), Gaps = 48/402 (11%)
Query: 33 THKETQQLHA-LSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYN 91
T KE +Q+HA L V L + + ++ + H L YA I DR + P+L N
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDH-KYLDYANQILDRS-EKPTLFALN 75
Query: 92 LLIKCYVFNQRSHEALTLFCDLLDRF--LLPDNFTLPCVIKGAARLGAIKEGKQIHGLVF 149
+I+ + + ++ + +L L PDN+T+ +++ L + G Q+HG+
Sbjct: 76 SMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTI 135
Query: 150 KLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMK 209
+ GF D V + L+S+YA+ G +D +VF+++ D V ++ + G+V A K
Sbjct: 136 RRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARK 195
Query: 210 LFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMP----------------------- 246
LF+ MP+RD +W ++ G+++ G+ A +F+ M
Sbjct: 196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGA 255
Query: 247 -----------NRNLVS-----WNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAG 290
RN + +++ Y K GD++ A E+F ME +++ TW+S + G
Sbjct: 256 LDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNG 315
Query: 291 YELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVD 350
+NG + LEL M V PN T VS L + + +++G+ H ++N F ++
Sbjct: 316 LAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIE 374
Query: 351 GVLG--TLLIQMYSKCGSIESALTVFRAIS-KKKVGHWTAMI 389
L L+ +Y++ G +E A+++ + + K W++++
Sbjct: 375 PQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 237/663 (35%), Positives = 386/663 (58%), Gaps = 12/663 (1%)
Query: 35 KETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94
K+ Q LH ++K+ + +++ L+++Y+ AR +FD + S V YN +I
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYL--KFRRPTDARRVFDEMDVRDS-VSYNTMI 280
Query: 95 KCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
Y+ + E++ +F + LD+F PD T+ V++ L + K I+ + K GF
Sbjct: 281 CGYLKLEMVEESVRMFLENLDQFK-PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
+ V + L+ +YAK G++ R VF++M+ KD VSWN +I GY++ G++ AMKLF M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 215 ----PDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNR----NLVSWNAMINGYMKAGDV 266
D ++ L+ ++ ++ + + +L NA+I+ Y K G+V
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 267 DSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAV 326
+ ++F M D +TWN++I+ G F L++ M +V+P+ AT + L
Sbjct: 460 GDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMC 519
Query: 327 AGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWT 386
A LA G+ +H +++ G+ + +G LI+MYSKCG +E++ VF +S++ V WT
Sbjct: 520 ASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWT 579
Query: 387 AMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMIND 446
MI GM+G +AL+ F M + G+ P ++ FI ++ ACSH+GLV++G F M
Sbjct: 580 GMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTH 639
Query: 447 YGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEY 506
Y I+P IEHY C+VD+L R+ + +A+ I++MP++P+ IW S+L R G+ + E
Sbjct: 640 YKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAER 699
Query: 507 AANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLH 566
+ +I++ PD G ++ SN YAA +WDKVS +R+ +K + K+PG S IE +H
Sbjct: 700 VSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVH 759
Query: 567 EFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLA 626
F GD S PQ++ I+ L + + + G++PD +V +E+++EK + HSERLA
Sbjct: 760 VFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLA 819
Query: 627 IAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCK 686
IAFGL+N + +P++++KNLRVC DCH VTKL+S I REI+VRD +RFH FK+G+CSCK
Sbjct: 820 IAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCK 879
Query: 687 DFW 689
D W
Sbjct: 880 DRW 882
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 249/528 (47%), Gaps = 29/528 (5%)
Query: 15 LQQHLPSRLHWNILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYA 74
+Q + S L SS E +++HAL + L S +L+ Y H +
Sbjct: 1 MQTRVSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKY--SHFREPASS 58
Query: 75 RSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAAR 134
S+F R+ ++ L+N +I+ + N EAL + L + + PD +T P VIK A
Sbjct: 59 LSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAG 118
Query: 135 LGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCL 194
L + G ++ + +GF D FV ++LV MY++ G + R+VFD M +DLVSWN L
Sbjct: 119 LFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSL 178
Query: 195 IDGYVKKGEVEVAMKLFDEMPDR----DLFSWTCLVDGFSKCGKVEIAREI----FYRMP 246
I GY G E A++++ E+ + D F+ + ++ F V+ + +
Sbjct: 179 ISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV 238
Query: 247 NRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGY-------ELNGRFME 299
N +V N ++ Y+K A +FD+M++RD +++N+MI GY E F+E
Sbjct: 239 NSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE 298
Query: 300 ALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQ 359
L+ + P+ T+ S L A L L+ +++++Y++K GFV++ + +LI
Sbjct: 299 NLDQFK--------PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350
Query: 360 MYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAIT 419
+Y+KCG + +A VF ++ K W ++I G G +A+ LF M M + IT
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 420 FIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESM 479
++ +++ + + G+ + I GI + L+D+ + G + ++ SM
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSM 469
Query: 480 PMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIK--VAPDTIGCYVVL 525
+ V W +++S G+ G + K V PD V L
Sbjct: 470 GT-GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust.
Identities = 235/656 (35%), Positives = 375/656 (57%), Gaps = 17/656 (2%)
Query: 35 KETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94
KE +QL + N++ +G L+S Y+ + + AR++F+ ++ ++V + ++
Sbjct: 65 KEARQLFDEMSERNVVSWNG----LVSGYIKNRM--IVEARNVFE-LMPERNVVSWTAMV 117
Query: 95 KCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
K Y+ EA +LF + +R + + + G G I + ++++ ++
Sbjct: 118 KGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMPVK--- 170
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
D ++++ + G +D R +FD M ++++V+W +I GY + V+VA KLF+ M
Sbjct: 171 -DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM 229
Query: 215 PDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFD 274
P++ SWT ++ G++ G++E A E F MP + +++ NAMI G+ + G++ A +FD
Sbjct: 230 PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFD 289
Query: 275 DMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNK 334
ME RD TW MI YE G +EAL+L M V P+ +L+S LS A LA L
Sbjct: 290 LMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQY 349
Query: 335 GRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGM 394
GR +H+++V+ F D + ++L+ MY KCG + A VF S K + W ++I G
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 395 HGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIE 454
HG+ +AL +F++M G P +T I +L ACS+AG + +G F M + + + PT+E
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVE 469
Query: 455 HYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKV 514
HY C VD+L R G +++A IESM ++P+ +W +LL + H D+ E AA L +
Sbjct: 470 HYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Query: 515 APDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGD-K 573
PD G YV+LS+I A+ +W V+ VR+ M+ K PG S IE +H F G K
Sbjct: 530 EPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIK 589
Query: 574 SHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLIN 633
+HP+ I L + L+ AG+ PD + VL + D++EK L HSERLA+A+GL+
Sbjct: 590 NHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDV-DEEEKVDSLSRHSERLAVAYGLLK 648
Query: 634 VKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+ PIR++KNLRVC DCH+ KL+S + REII+RD +RFHHF NG CSC+D+W
Sbjct: 649 LPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 188/408 (46%), Gaps = 52/408 (12%)
Query: 133 ARLGAIKEGKQI-HGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSW 191
+R+G I E ++ L FK ++ S+VS Y G R++FD M ++++VSW
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWN-----SIVSGYFSNGLPKEARQLFDEMSERNVVSW 82
Query: 192 NCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLV 251
N L+ GY+K + A +F+ MP+R++ SWT +V G+ + G V A +F+RMP RN V
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 252 SWNA-------------------------------MINGYMKAGDVDSACELFDDMEIRD 280
SW MI G + G VD A +FD+M R+
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 281 LITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHS 340
++TW +MI GY N R A +L E M + T VS S + G + GR +
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVM-------PEKTEVSWTSMLLGYTL--SGRIEDA 253
Query: 341 YIVKNGFVVDGVLG-TLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMAT 399
+ V+ +I + + G I A VF + + W MI G
Sbjct: 254 EEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFEL 313
Query: 400 QALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCL 459
+ALDLF +M + G++P+ + I +L+ C+ + GR+ ++ + + L
Sbjct: 314 EALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR-CQFDDDVYVASVL 372
Query: 460 VDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYA 507
+ + + G L +AK + + + ++W S++SG +HG +GE A
Sbjct: 373 MTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHG---LGEEA 416
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 179/376 (47%), Gaps = 23/376 (6%)
Query: 164 VSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWT 223
+S ++ G+I+ R+ FD++ K + SWN ++ GY G + A +LFDEM +R++ SW
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 224 CLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLIT 283
LV G+ K + AR +F MP RN+VSW AM+ GYM+ G V A LF M R+ ++
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 284 WNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIV 343
W M G +GR +A +L + M + DV V++ + + GL +GR + ++
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDV-------VASTNMIGGLC--REGRVDEARLI 194
Query: 344 KNGFVVDGVLG-TLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQAL 402
+ V+ T +I Y + ++ A +F + +K WT+M++G + G A
Sbjct: 195 FDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAE 254
Query: 403 DLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDI 462
+ F M MKP I ++ G ++ RR F++M + + ++
Sbjct: 255 EFFEV---MPMKPV-IACNAMIVGFGEVGEISKARRVFDLMEDRDNAT-----WRGMIKA 305
Query: 463 LCRTGYLEEAKSTIESMP---MRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVA-PDT 518
R G+ EA M +RP+F +S+LS + G +L++ D
Sbjct: 306 YERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDD 365
Query: 519 IGCYVVLSNIYAAAGQ 534
+ VL +Y G+
Sbjct: 366 VYVASVLMTMYVKCGE 381
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 351 GVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCR 410
GV + I S+ G I A F ++ K +G W +++ G +G+ +A LF++M
Sbjct: 17 GVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMS- 75
Query: 411 MGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLE 470
+ +++ G+++ ++ + R F +M E + + +V + G +
Sbjct: 76 ---ERNVVSWNGLVSGYIKNRMIVEARNVFELM-----PERNVVSWTAMVKGYMQEGMVG 127
Query: 471 EAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYA 530
EA+S MP R N V W + G + G D A L + P + V +N+
Sbjct: 128 EAESLFWRMPER-NEVSWTVMFGGLIDDGRID----KARKLYDMMP--VKDVVASTNMIG 180
Query: 531 AAGQWDKVSEVR 542
+ +V E R
Sbjct: 181 GLCREGRVDEAR 192
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/637 (36%), Positives = 353/637 (55%), Gaps = 50/637 (7%)
Query: 102 RSHEALTLFC---------DLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLG 152
R EA+ + C LL R P T +I+ ++ A++EGK++H + G
Sbjct: 56 RFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSG 115
Query: 153 FGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFD 212
F + + L+ MYAK G + R+VFD M ++DL SWN +++GY + G +E A KLFD
Sbjct: 116 FVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFD 175
Query: 213 EMPDRDLFSWTCLVDGFSKCGKVEIAREIF---YRMPNR--------------------- 248
EM ++D +SWT +V G+ K + E A ++ R+PN
Sbjct: 176 EMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 249 ----------------NLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYE 292
+ V W+++++ Y K G +D A +FD + +D+++W SMI Y
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 293 LNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGV 352
+ R+ E L ++ PN+ T L+A A L G+ +H Y+ + GF
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 353 LGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMG 412
+ L+ MY+KCG+IESA V K + WT++I G +G +AL F+ + + G
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 413 MKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEA 472
KP +TF+ VL+AC+HAGLV G +F + + + T +HY CLVD+L R+G E+
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 473 KSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAA 532
KS I MPM+P+ +W S+L G +GN D+ E AA L K+ P+ YV ++NIYAAA
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
Query: 533 GQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKL 592
G+W++ ++R+ M++ G K PGSS E + H F+ D SHP ++I L E+R K+
Sbjct: 536 GKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Query: 593 KAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDC 652
K G+VP T+ VL +ED+ +KE L HSE+LA+AF +++ + + I++ KNLR C DC
Sbjct: 596 KEEGYVPATSLVLHDVEDE-QKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDC 654
Query: 653 HSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
H K +S I R+I VRD++RFH F+NG CSC D+W
Sbjct: 655 HGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 178/373 (47%), Gaps = 15/373 (4%)
Query: 71 LHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFL--LPDNFTLPCV 128
L AR +FD + + S + ++ YV + EAL L+ L+ R P+ FT+
Sbjct: 167 LEEARKLFDEMTEKDSYS-WTAMVTGYVKKDQPEEALVLY-SLMQRVPNSRPNIFTVSIA 224
Query: 129 IKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDL 188
+ AA + I+ GK+IHG + + G D+ + SSL+ MY K G ID R +FD + +KD+
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 189 VSWNCLIDGYVKKGEVEVAMKLFDEM----PDRDLFSWTCLVDGFSKCGKVEIAREIFYR 244
VSW +ID Y K LF E+ + +++ +++ + E+ +++
Sbjct: 285 VSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY 344
Query: 245 MPNRNLVSW----NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEA 300
M + +++++ Y K G+++SA + D DL++W S+I G NG+ EA
Sbjct: 345 MTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEA 404
Query: 301 LELLETMLIGDVLPNDATLVSALSAVAGLAVLNKG-RWMHSYIVKNGFVVDGVLGTLLIQ 359
L+ + +L P+ T V+ LSA ++ KG + +S K+ T L+
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 360 MYSKCGSIESALTVFRAISKKKVGH-WTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAI 418
+ ++ G E +V + K W +++ G +G A + ++ ++ + +
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPV 523
Query: 419 TFIGVLNACSHAG 431
T++ + N + AG
Sbjct: 524 TYVTMANIYAAAG 536
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 49/318 (15%)
Query: 35 KETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94
+ +++H V+ L + S L+ +Y + AR+IFD+I++ +V + +I
Sbjct: 235 RRGKEIHGHIVRAGLDSDEVLWSSLMDMY--GKCGCIDEARNIFDKIVEK-DVVSWTSMI 291
Query: 95 KCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
Y + R E +LF +L+ P+ +T V+ A L + GKQ+HG + ++GF
Sbjct: 292 DRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFD 351
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
F SSLV MY K G I+ + V D DLVSW LI G + G+ + A+K FD +
Sbjct: 352 PYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLL 411
Query: 215 ------PDRDLF----------------------------------SWTCLVDGFSKCGK 234
PD F +TCLVD ++ G+
Sbjct: 412 LKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGR 471
Query: 235 VEIAREIFYRMPNR-NLVSWNAMINGYMKAGDVD----SACELFDDMEIRDLITWNSMIA 289
E + + MP + + W +++ G G++D +A ELF +E + +T+ +M
Sbjct: 472 FEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELF-KIEPENPVTYVTMAN 530
Query: 290 GYELNGRFMEALELLETM 307
Y G++ E ++ + M
Sbjct: 531 IYAAAGKWEEEGKMRKRM 548
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/616 (37%), Positives = 343/616 (55%), Gaps = 29/616 (4%)
Query: 90 YNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVF 149
+N+ ++ + E+++L+ +L PD F+ P ++K A L G+Q+H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 150 KLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVS--WNCLIDGYVKKGEVEVA 207
K G + FVL++L+SMY K G + R+VF+ +S +N LI GY +V A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 208 MKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNL-------------VSWN 254
+F M + + VD + G V + Y R+L N
Sbjct: 141 AYMFRRMKETGVS-----VDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195
Query: 255 AMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLP 314
+ I YMK G V++ LFD+M ++ LITWN++I+GY NG + LEL E M V P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255
Query: 315 NDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVF 374
+ TLVS LS+ A L G + + NGFV + + I MY++CG++ A VF
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 375 RAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVN 434
+ K + WTAMI GMHGM L LF+ M + G++P F+ VL+ACSH+GL +
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 435 DGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSG 494
G F M +Y +EP EHY CLVD+L R G L+EA IESMP+ P+ +W +LL
Sbjct: 376 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGA 435
Query: 495 ARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDP 554
+ H N D+ E A +I+ P+ IG YV++SNIY+ + + + +R MM++R FRK P
Sbjct: 436 CKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 495
Query: 555 GSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNK-LKAAGHVPDTTQVLLCIEDQKE 613
G S +EH+G +H F+ GD+SH QT+E+H L E+ ++ AG++ + +E
Sbjct: 496 GYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELAGNMD--------CDRGEE 547
Query: 614 KEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNS 673
+ HSERLAIAFG++N + I ++KNLRVC DCH K +S I +R+ +VRD S
Sbjct: 548 VSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDAS 607
Query: 674 RFHHFKNGSCSCKDFW 689
RFH+FK+G CSCKD+W
Sbjct: 608 RFHYFKDGVCSCKDYW 623
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+ LH VK L + + +++Y+ ++ R +FD + L+ +N +I Y
Sbjct: 176 RSLHGQCVKGGLDSEVAVLNSFITMYMK--CGSVEAGRRLFDE-MPVKGLITWNAVISGY 232
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
N +++ L L+ + + PD FTL V+ A LGA K G ++ LV GF +
Sbjct: 233 SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNV 292
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM--- 214
FV ++ +SMYA+ G + R VFD M K LVSW +I Y G E+ + LFD+M
Sbjct: 293 FVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 215 ---PDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVS-----WNAMINGYMKAGDV 266
PD +F ++ S G + E+F M + ++ +++ +AG +
Sbjct: 353 GIRPDGAVF--VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 267 DSACELFDDMEIR-DLITWNSMIAGYELN 294
D A E + M + D W +++ +++
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIH 439
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 247/669 (36%), Positives = 373/669 (55%), Gaps = 70/669 (10%)
Query: 27 ILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPS 86
+L+ S+ + + +H ++T+LI ++SRLL+L VD D P+
Sbjct: 18 LLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVD-------------DSTFNKPT 64
Query: 87 LVLYNLLIKCY-VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIH 145
NLL Y +F+Q + L +F N + C GA A
Sbjct: 65 ----NLLGYAYGIFSQIQNPNLFVF-----------NLLIRCFSTGAEPSKA-------- 101
Query: 146 GLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVE 205
FGF +L S R++ D +++ LI + V
Sbjct: 102 -------FGFYTQMLKS---------------RIW-----PDNITFPFLIKASSEMECVL 134
Query: 206 VAMKLFDEMP----DRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYM 261
V + ++ D++ LV ++ CG + A IF +M R++VSW +M+ GY
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 262 KAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVS 321
K G V++A E+FD+M R+L TW+ MI GY N F +A++L E M V+ N+ +VS
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVS 254
Query: 322 ALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKK 381
+S+ A L L G + Y+VK+ V+ +LGT L+ M+ +CG IE A+ VF + +
Sbjct: 255 VISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETD 314
Query: 382 VGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFN 441
W+++I GL +HG A +A+ F++M +G P +TF VL+ACSH GLV G +
Sbjct: 315 SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 442 MMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNK 501
M D+GIEP +EHYGC+VD+L R G L EA++ I M ++PN I +LL + + N
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNT 434
Query: 502 DIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEH 561
++ E N LIKV P+ G YV+LSNIYA AGQWDK+ +R+MMK++ +K PG S IE
Sbjct: 435 EVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEI 494
Query: 562 RGVLHEFVVG-DKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELEN 620
G +++F +G D+ HP+ +I K E+ K++ G+ +T + D++EKE+ +
Sbjct: 495 DGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDV-DEEEKESSIHM 553
Query: 621 HSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKN 680
HSE+LAIA+G++ K + IRIVKNLRVC DCH+VTKL+S +Y RE+IVRD +RFHHF+N
Sbjct: 554 HSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRN 613
Query: 681 GSCSCKDFW 689
G CSC+D+W
Sbjct: 614 GVCSCRDYW 622
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/681 (35%), Positives = 365/681 (53%), Gaps = 71/681 (10%)
Query: 55 ISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLL 114
I + LLS +D AR +F+++ P + LY +I Y + R +AL LF
Sbjct: 42 ICNHLLSRRIDE-------AREVFNQV-PSPHVSLYTKMITGYTRSNRLVDALNLF---- 89
Query: 115 DRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYA------ 168
D + D + +I G G + ++ FD+ S+VS A
Sbjct: 90 DEMPVRDVVSWNSMISGCVECGDMNTAVKL----------FDEMPERSVVSWTAMVNGCF 139
Query: 169 KFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDG 228
+ G++D R+F M KD +WN ++ GY++ G+V+ A+KLF +MP +++ SWT ++ G
Sbjct: 140 RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICG 199
Query: 229 FSKCGKVEIAREIFYRM----------PNRNLVSWNA----------------------- 255
+ + A ++F M P +++ A
Sbjct: 200 LDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYE 259
Query: 256 ------MINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLI 309
+I Y + + ++FD+ + W ++++GY LN + +AL + ML
Sbjct: 260 EYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR 319
Query: 310 GDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIES 369
+LPN +T S L++ + L L+ G+ MH VK G D +G L+ MYS G++
Sbjct: 320 NSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVND 379
Query: 370 ALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSH 429
A++VF I KK + W ++IVG HG A +F +M R+ +P ITF G+L+ACSH
Sbjct: 380 AVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSH 439
Query: 430 AGLVNDGRRYFNMMINDYG-IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIW 488
G + GR+ F M + I+ I+HY C+VDIL R G L+EA+ IE M ++PN ++W
Sbjct: 440 CGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVW 499
Query: 489 MSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKR 548
++LLS R H + D GE AA + + + YV+LSNIYA+AG+W VS++R MKK
Sbjct: 500 LALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKN 559
Query: 549 GFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCI 608
G K PGSS + RG HEF GD+ P I+ KL +R KLK G+ PD L +
Sbjct: 560 GIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDV 617
Query: 609 EDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREII 668
ED+ +KE L HSERLAIAFGLIN S + ++KNLRVC DCH+V KL+SG+ REI+
Sbjct: 618 EDE-QKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIV 676
Query: 669 VRDNSRFHHFKNGSCSCKDFW 689
+RD RFHHFKNG+CSC D+W
Sbjct: 677 LRDPIRFHHFKNGTCSCGDYW 697
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 170/390 (43%), Gaps = 66/390 (16%)
Query: 194 LIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSW 253
LI ++ ++ A ++F+++P + +T ++ G+++ ++ A +F MP R++VSW
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSW 100
Query: 254 NAMINGYMKAGDVDSACELFDD-------------------------------MEIRDLI 282
N+MI+G ++ GD+++A +LFD+ M ++D
Sbjct: 101 NSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTA 160
Query: 283 TWNSMIAGYELNGRFMEALELLE-----------TMLIG-----------DVLPN----- 315
WNSM+ GY G+ +AL+L + TM+ G D+ N
Sbjct: 161 AWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCC 220
Query: 316 ----DATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESAL 371
++A A + G +H I+K GF+ + + LI Y+ C I +
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280
Query: 372 TVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAG 431
VF ++V WTA++ G ++ AL +F+ M R + P TF LN+CS G
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340
Query: 432 LVNDGRRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSL 491
++ G+ + + G+E LV + +G + +A S + + + V W S+
Sbjct: 341 TLDWGKEMHGVAVK-LGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSI 398
Query: 492 LSGARNHGNKDIGEYAANNLIKV--APDTI 519
+ G HG +I++ PD I
Sbjct: 399 IVGCAQHGRGKWAFVIFGQMIRLNKEPDEI 428
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 226/562 (40%), Positives = 334/562 (59%), Gaps = 13/562 (2%)
Query: 139 KEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGY 198
K+ K+IH +V + GF +L+ L+ G++ R+VFD M + WN L GY
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 199 VKKGEVEVAMKLFDEMPD----RDLFSWTCLVDGFSK-----CGKVEIAREIFYRMPNRN 249
V+ ++ L+ +M D D F++ +V S+ CG A + Y
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 250 LVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLI 309
+V+ ++ YMK G++ SA LF+ M+++DL+ WN+ +A G ALE M
Sbjct: 145 IVA-TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 310 GDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIES 369
V + T+VS LSA L L G ++ K + ++ + M+ KCG+ E+
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 370 ALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSH 429
A +F + ++ V W+ MIVG M+G + +AL LF M G++P +TF+GVL+ACSH
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 430 AGLVNDGRRYFNMMI--NDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVI 487
AGLVN+G+RYF++M+ ND +EP EHY C+VD+L R+G LEEA I+ MP+ P+ I
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 488 WMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKK 547
W +LL H + +G+ A+ L++ APD +V+LSNIYAAAG+WD V +VR M+K
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 548 RGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLC 607
G +K SS+E G +H F GDKSHPQ+ I+ KL E+ K++ G+VPDT V
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHD 503
Query: 608 IEDQKEKEAELENHSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREI 667
+E +EKE L +HSE+LAIAFGLI + PIR++KNLR C+DCH+ +K +S + + EI
Sbjct: 504 VE-MEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEI 562
Query: 668 IVRDNSRFHHFKNGSCSCKDFW 689
I+RD +RFHHF+NG CSCK+FW
Sbjct: 563 IMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/601 (36%), Positives = 343/601 (57%), Gaps = 41/601 (6%)
Query: 129 IKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDL 188
I+ ++ GKQ+H L+ GF DKF+ + L+SMY+K G+ V+ M K+
Sbjct: 51 IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110
Query: 189 VSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRM--- 245
+S N LI+GYV+ G++ A K+FDEMPDR L +W ++ G + E +F M
Sbjct: 111 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 170
Query: 246 ---PNR---------------------------------NLVSWNAMINGYMKAGDVDSA 269
P+ +LV +++ + YM+ G +
Sbjct: 171 GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 230
Query: 270 CELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGL 329
+ M +R+L+ WN++I G NG L L + M I PN T V+ LS+ + L
Sbjct: 231 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 290
Query: 330 AVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMI 389
A+ +G+ +H+ +K G + + LI MYSKCG + A F + W++MI
Sbjct: 291 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 350
Query: 390 VGLGMHGMATQALDLFNKMC-RMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYG 448
G HG +A++LFN M + M+ + F+ +L ACSH+GL + G F+MM+ YG
Sbjct: 351 SAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 410
Query: 449 IEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAA 508
+P ++HY C+VD+L R G L++A++ I SMP++ + VIW +LLS H N ++ +
Sbjct: 411 FKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF 470
Query: 509 NNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEF 568
++++ P+ CYV+L+N++A+A +W VSEVR+ M+ + +K+ G S EH+G +H+F
Sbjct: 471 KEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQF 530
Query: 569 VVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIA 628
+GD+S ++ EI+S L E+ ++K G+ PDT VL + D++EKE++L HSE+LA+A
Sbjct: 531 KMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDM-DEEEKESDLVQHSEKLAVA 589
Query: 629 FGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDF 688
F L+ + +PIRI+KNLRVC+DCH K +S I NREI +RD SRFHHF NG CSC D+
Sbjct: 590 FALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDY 649
Query: 689 W 689
W
Sbjct: 650 W 650
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 167/360 (46%), Gaps = 22/360 (6%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
AR +FD + L +N +I + + + E L+LF ++ PD +TL V G+A
Sbjct: 129 ARKVFDE-MPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSA 187
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
L ++ G+QIHG K G D V SSL MY + G++ G V +M ++LV+WN
Sbjct: 188 GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNT 247
Query: 194 LIDGYVKKGEVEVAMKLFDEM------PDRDLFSWTCLVDGFSKCGKV-------EIARE 240
LI G + G E + L+ M P++ F V S C + +I E
Sbjct: 248 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITF-----VTVLSSCSDLAIRGQGQQIHAE 302
Query: 241 IFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEA 300
+ + +++I+ Y K G + A + F + E D + W+SMI+ Y +G+ EA
Sbjct: 303 AIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA 362
Query: 301 LELLETMLIGDVLP-NDATLVSALSAVAGLAVLNKGRWMHSYIV-KNGFVVDGVLGTLLI 358
+EL TM + N+ ++ L A + + +KG + +V K GF T ++
Sbjct: 363 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 422
Query: 359 QMYSKCGSIESALTVFRAIS-KKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTA 417
+ + G ++ A + R++ K + W ++ +H A A +F ++ ++ +A
Sbjct: 423 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 482
Score = 34.3 bits (77), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 6/194 (3%)
Query: 36 ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIK 95
+ QQ+HA ++K + S L+S+Y L A F + V+++ +I
Sbjct: 295 QGQQIHAEAIKIGASSVVAVVSSLISMY--SKCGCLGDAAKAFSE-REDEDEVMWSSMIS 351
Query: 96 CYVFNQRSHEALTLFCDLLDRFLLPDN-FTLPCVIKGAARLGAIKEGKQIHG-LVFKLGF 153
Y F+ + EA+ LF + ++ + N ++ + G +G ++ +V K GF
Sbjct: 352 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 411
Query: 154 GFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDK-DLVSWNCLIDGYVKKGEVEVAMKLFD 212
+ +V + + G +D + +M K D+V W L+ E+A ++F
Sbjct: 412 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 471
Query: 213 EMPDRDLFSWTCLV 226
E+ D C V
Sbjct: 472 EILQIDPNDSACYV 485
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 234/654 (35%), Positives = 360/654 (55%), Gaps = 36/654 (5%)
Query: 39 QLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYV 98
Q+H L +K + S + +L+ + L YAR + P ++N L++ Y
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLL-LCFPEPDAFMFNTLVRGYS 81
Query: 99 FNQRSHEALTLFCDLLDR-FLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ H ++ +F +++ + F+ PD+F+ VIK +++ G Q+H K G
Sbjct: 82 ESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHL 141
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
FV ++L+ MY G C VE A K+FDEM
Sbjct: 142 FVGTTLIGMYGGCG---------------------C----------VEFARKVFDEMHQP 170
Query: 218 DLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDME 277
+L +W ++ + V AREIF +M RN SWN M+ GY+KAG+++SA +F +M
Sbjct: 171 NLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMP 230
Query: 278 IRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRW 337
RD ++W++MI G NG F E+ + + PN+ +L LSA + G+
Sbjct: 231 HRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKI 290
Query: 338 MHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKK-VGHWTAMIVGLGMHG 396
+H ++ K G+ + LI MYS+CG++ A VF + +K+ + WT+MI GL MHG
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 397 MATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHY 456
+A+ LFN+M G+ P I+FI +L+ACSHAGL+ +G YF+ M Y IEP IEHY
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY 410
Query: 457 GCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAP 516
GC+VD+ R+G L++A I MP+ P ++W +LL +HGN ++ E L ++ P
Sbjct: 411 GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDP 470
Query: 517 DTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHP 576
+ G V+LSN YA AG+W V+ +R+ M + +K S +E +++F G+K
Sbjct: 471 NNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKG 530
Query: 577 QTDEIHSKLSEMRNKLK-AAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVK 635
E H KL E+ +LK AG+ P+ L +E++ EKE ++ HSE+LA+AF L +
Sbjct: 531 IDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEE-EKEDQVSKHSEKLALAFALARLS 589
Query: 636 SRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+ IRIVKNLR+C DCH+V KL S +Y EI+VRD +RFH FK+GSCSC+D+W
Sbjct: 590 KGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 159/354 (44%), Gaps = 26/354 (7%)
Query: 16 QQHLPSRLHWNILKFSSTHKETQQLHALSVKTNLIYHSGIS-SRLLSLYVDPHINNLHYA 74
+ H P+ + WN + ++ + A + ++ + S + +L+ Y+ L A
Sbjct: 166 EMHQPNLVAWNAV-ITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKA--GELESA 222
Query: 75 RSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAAR 134
+ IF + H V ++ +I N +E+ F +L + P+ +L V+ ++
Sbjct: 223 KRIFSE-MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQ 281
Query: 135 LGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKD-LVSWNC 193
G+ + GK +HG V K G+ + V ++L+ MY++ G + + R VF+ M +K +VSW
Sbjct: 282 SGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTS 341
Query: 194 LIDGYVKKGEVEVAMKLFDEMP----DRDLFSWTCLVDGFSKCGKVEIAREIFYRMP--- 246
+I G G+ E A++LF+EM D S+ L+ S G +E + F M
Sbjct: 342 MIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVY 401
Query: 247 --NRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDL-ITWNSMIAGYELNGRFMEALEL 303
+ + M++ Y ++G + A + M I I W +++ +G +EL
Sbjct: 402 HIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN----IEL 457
Query: 304 LETM--LIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGT 355
E + + ++ PN++ + LS A G+W ++ +V + T
Sbjct: 458 AEQVKQRLNELDPNNSGDLVLLSNAYATA----GKWKDVASIRKSMIVQRIKKT 507
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/669 (36%), Positives = 384/669 (57%), Gaps = 17/669 (2%)
Query: 32 STHKETQQLHALSVKTNLIYHSG---ISSRLLSLYVDPHINNLHYARSIFDRILQHPSLV 88
S K +++HA +K++ HS + + L+++Y + A I R + + +V
Sbjct: 298 SYAKLGKEIHASVLKSST--HSSELYVCNALIAMYT--RCGKMPQAERIL-RQMNNADVV 352
Query: 89 LYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLV 148
+N LIK YV N EAL F D++ D ++ +I + RL + G ++H V
Sbjct: 353 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Query: 149 FKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAM 208
K G+ + V ++L+ MY+K R F M DKDL+SW +I GY + A+
Sbjct: 413 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 472
Query: 209 KLFDEMPDR----DLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNL---VSWNAMINGYM 261
+LF ++ + D ++ S + I +EI + + L V N +++ Y
Sbjct: 473 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 532
Query: 262 KAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVS 321
K ++ A +F+ ++ +D+++W SMI+ LNG EA+EL M+ + + L+
Sbjct: 533 KCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLC 592
Query: 322 ALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKK 381
LSA A L+ LNKGR +H Y+++ GF ++G + ++ MY+ CG ++SA VF I +K
Sbjct: 593 ILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 652
Query: 382 VGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFN 441
+ +T+MI GMHG A++LF+KM + P I+F+ +L ACSHAGL+++GR +
Sbjct: 653 LLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLK 712
Query: 442 MMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNK 501
+M ++Y +EP EHY CLVD+L R + EA ++ M P +W +LL+ R+H K
Sbjct: 713 IMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEK 772
Query: 502 DIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEH 561
+IGE AA L+++ P G V++SN++A G+W+ V +VR MK G K PG S IE
Sbjct: 773 EIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Query: 562 RGVLHEFVVGDKSHPQTDEIHSKLSEMRNKL-KAAGHVPDTTQVLLCIEDQKEKEAELEN 620
G +H+F DKSHP++ EI+ KLSE+ KL + G+V DT VL + D+ EK L
Sbjct: 833 DGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNV-DEGEKVQMLHG 891
Query: 621 HSERLAIAFGLINVKSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKN 680
HSER+AIA+GL+ R+ +RI KNLRVC DCH+ KL+S ++ R+I++RD +RFHHF++
Sbjct: 892 HSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFES 951
Query: 681 GSCSCKDFW 689
G CSC D W
Sbjct: 952 GLCSCGDSW 960
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 228/477 (47%), Gaps = 17/477 (3%)
Query: 36 ETQQLHALSVKTNLIYH-SGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLI 94
+ +QLH+ KT + ++ +L+ +Y +L A +FD + + +N +I
Sbjct: 98 QGRQLHSRIFKTFPSFELDFLAGKLVFMY--GKCGSLDDAEKVFDEMPDRTAFA-WNTMI 154
Query: 95 KCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
YV N AL L+ ++ + + P ++K A+L I+ G ++H L+ KLG+
Sbjct: 155 GAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYH 214
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDK-DLVSWNCLIDGYVKKGEVEVAMKLFDE 213
F++++LVSMYAK ++ RR+FD +K D V WN ++ Y G+ ++LF E
Sbjct: 215 STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFRE 274
Query: 214 M------PDR-DLFSWTCLVDGFS--KCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAG 264
M P+ + S DGFS K GK A + + L NA+I Y + G
Sbjct: 275 MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG 334
Query: 265 DVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALS 324
+ A + M D++TWNS+I GY N + EALE M+ ++ ++ S ++
Sbjct: 335 KMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIA 394
Query: 325 AVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGH 384
A L+ L G +H+Y++K+G+ + +G LI MYSKC F + K +
Sbjct: 395 ASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLIS 454
Query: 385 WTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMI 444
WT +I G + +AL+LF + + M+ + +L A S + + ++
Sbjct: 455 WTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHIL 514
Query: 445 NDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNK 501
++ I++ LVD+ + + A ES+ + + V W S++S + +GN+
Sbjct: 515 RKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSALNGNE 568
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 154/310 (49%), Gaps = 11/310 (3%)
Query: 128 VIKGAARLGAIKEGKQIHGLVFKLGFGFD-KFVLSSLVSMYAKFGEIDLGRRVFDAMDDK 186
V++ + A+ +G+Q+H +FK F+ F+ LV MY K G +D +VFD M D+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 187 DLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR----DLFSWTCLVDGFSKCGKVEIAREIF 242
+WN +I YV GE A+ L+ M L S+ L+ +K + E+
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 243 YRMPNRNLVSW----NAMINGYMKAGDVDSACELFDDMEIR-DLITWNSMIAGYELNGRF 297
+ S NA+++ Y K D+ +A LFD + + D + WNS+++ Y +G+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKS 265
Query: 298 MEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNG-FVVDGVLGTL 356
+E LEL M + PN T+VSAL+A G + G+ +H+ ++K+ + +
Sbjct: 266 LETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNA 325
Query: 357 LIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPT 416
LI MY++CG + A + R ++ V W ++I G + M +AL+ F+ M G K
Sbjct: 326 LIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSD 385
Query: 417 AITFIGVLNA 426
++ ++ A
Sbjct: 386 EVSMTSIIAA 395
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 238/592 (40%), Positives = 340/592 (57%), Gaps = 51/592 (8%)
Query: 26 NILKFSSTHKETQQLHALSVKTNLIYHSGISSRLLSLYVD---PHINNLHYARSIFDRI- 81
++L T + Q+H +KT +I +S +++R++ + P++ + +AR +F
Sbjct: 17 HVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD--FARCVFHEYH 74
Query: 82 --------LQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
++ P L+N +IK + + +AL L C +L+ + D F+L V+K +
Sbjct: 75 VCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 132
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
RLG +K G QIHG + K G D F+ + L+ +Y K G + L R++FD M +D VS+N
Sbjct: 133 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNS 192
Query: 194 LIDGYVKKG----------------------------------EVEVAMKLFDEMPDRDL 219
+IDGYVK G V++A KLF +MP++DL
Sbjct: 193 MIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDL 252
Query: 220 FSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIR 279
SW ++DG+ K G++E A+ +F MP R++V+W MI+GY K G V A LFD M R
Sbjct: 253 ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR 312
Query: 280 DLITWNSMIAGYELNGRFMEALELLETMLI-GDVLPNDATLVSALSAVAGLAVLNKGRWM 338
D++ +NSM+AGY N MEALE+ M +LP+D TLV L A+A L L+K M
Sbjct: 313 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM 372
Query: 339 HSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMA 398
H YIV+ F + G LG LI MYSKCGSI+ A+ VF I K + HW AMI GL +HG+
Sbjct: 373 HLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLG 432
Query: 399 TQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGC 458
A D+ ++ R+ +KP ITF+GVLNACSH+GLV +G F +M + IEP ++HYGC
Sbjct: 433 ESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGC 492
Query: 459 LVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDT 518
+VDIL R+G +E AK+ IE MP+ PN VIW + L+ +H + GE A +LI A
Sbjct: 493 MVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYN 552
Query: 519 IGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVV 570
YV+LSN+YA+ G W V VR MMK+R K PG S IE G +HEF V
Sbjct: 553 PSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust.
Identities = 218/554 (39%), Positives = 315/554 (56%), Gaps = 44/554 (7%)
Query: 81 ILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKE 140
+LQ PSL++YN ++K + + L LF +L + L PDNFTLP V+K RL + E
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIE 64
Query: 141 GKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVK 200
G+++HG K G FD +V +SL+ MYA G+I++ +VFD M +D+VSWN LI YV
Sbjct: 65 GEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVG 124
Query: 201 KGEVEVAMKLFDEMPDRDLFSW-------------------------------------- 222
G E A+ +F M +
Sbjct: 125 NGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRI 184
Query: 223 -TCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDL 281
LVD F KCG ++ AR +F M ++N+ W +M+ GY+ G +D A LF+ ++D+
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDV 244
Query: 282 ITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSY 341
+ W +M+ GY RF EALEL M + P++ LVS L+ A L +G+W+H Y
Sbjct: 245 VLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY 304
Query: 342 IVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQA 401
I +N VD V+GT L+ MY+KCG IE+AL VF I ++ WT++I GL M+GM+ +A
Sbjct: 305 INENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRA 364
Query: 402 LDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVD 461
LDL+ +M +G++ AITF+ VL AC+H G V +GR+ F+ M + ++P EH CL+D
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLID 424
Query: 462 ILCRTGYLEEAKSTIESMPMRPN---FVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDT 518
+LCR G L+EA+ I+ M + ++ SLLS ARN+GN I E A L KV
Sbjct: 425 LLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSD 484
Query: 519 IGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDK--SHP 576
+ +L+++YA+A +W+ V+ VR MK G RK PG SSIE GV HEF+VGD SHP
Sbjct: 485 SSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHP 544
Query: 577 QTDEIHSKLSEMRN 590
+ DEI+S L + N
Sbjct: 545 KMDEINSMLHQTTN 558
Score = 96.3 bits (238), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 74 ARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAA 133
AR +F+R +VL+ ++ YV R EAL LF + + PDNF L ++ G A
Sbjct: 232 ARVLFERS-PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA 290
Query: 134 RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNC 193
+ GA+++GK IHG + + DK V ++LV MYAK G I+ VF + ++D SW
Sbjct: 291 QTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTS 350
Query: 194 LIDGYVKKGEVEVAMKLFDEMPD----RDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRN 249
LI G G A+ L+ EM + D ++ ++ + G V R+IF+ M R+
Sbjct: 351 LIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 250 LVS-----WNAMINGYMKAGDVDSACELFDDM 276
V + +I+ +AG +D A EL D M
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 145/347 (41%), Gaps = 79/347 (22%)
Query: 36 ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIK 95
E +++H +VK L + S +S+ L+ +Y + + +FD + Q +V +N LI
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMY--ASLGKIEITHKVFDEMPQR-DVVSWNGLIS 120
Query: 96 CYVFNQRSHEALTLFCDLLDRFLLP-DNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFG 154
YV N R +A+ +F + L D T+ + + L ++ G++I+ V F
Sbjct: 121 SYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFE 179
Query: 155 FDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDK---------------------------- 186
+ ++LV M+ K G +D R VFD+M DK
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 187 ---DLVSWNCLIDGYVKKGEVEVAMKLFDEM------PDR-------------------- 217
D+V W +++GYV+ + A++LF M PD
Sbjct: 240 PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK 299
Query: 218 -------------DLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAG 264
D T LVD ++KCG +E A E+FY + R+ SW ++I G G
Sbjct: 300 WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Query: 265 DVDSACELFDDME---IR-DLITWNSMIAGYELNGRFMEALELLETM 307
A +L+ +ME +R D IT+ +++ G E ++ +M
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSM 406
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/557 (38%), Positives = 339/557 (60%), Gaps = 7/557 (1%)
Query: 36 ETQQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIK 95
+ +QLHA ++ NL I+ +L+S NL A +F+++ Q P++ L N LI+
Sbjct: 34 QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNL--AVRVFNQV-QEPNVHLCNSLIR 90
Query: 96 CYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGF 155
+ N + ++A +F ++ L DNFT P ++K + + K +H + KLG
Sbjct: 91 AHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSS 150
Query: 156 DKFVLSSLVSMYAKFGEIDL--GRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDE 213
D +V ++L+ Y++ G + + ++F+ M ++D VSWN ++ G VK GE+ A +LFDE
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 214 MPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELF 273
MP RDL SW ++DG+++C ++ A E+F +MP RN VSW+ M+ GY KAGD++ A +F
Sbjct: 211 MPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 274 DDMEI--RDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAV 331
D M + ++++TW +IAGY G EA L++ M+ + + A ++S L+A +
Sbjct: 271 DKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGL 330
Query: 332 LNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVG 391
L+ G +HS + ++ + + L+ MY+KCG+++ A VF I KK + W M+ G
Sbjct: 331 LSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHG 390
Query: 392 LGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEP 451
LG+HG +A++LF++M R G++P +TFI VL +C+HAGL+++G YF M Y + P
Sbjct: 391 LGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVP 450
Query: 452 TIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNL 511
+EHYGCLVD+L R G L+EA +++MPM PN VIW +LL R H DI + +NL
Sbjct: 451 QVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNL 510
Query: 512 IKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVG 571
+K+ P G Y +LSNIYAAA W+ V+++R MK G K G+SS+E +HEF V
Sbjct: 511 VKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVF 570
Query: 572 DKSHPQTDEIHSKLSEM 588
DKSHP++D+I+ L +
Sbjct: 571 DKSHPKSDQIYQMLGSL 587
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 90/224 (40%), Gaps = 13/224 (5%)
Query: 330 AVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMI 389
A LN+ + +H+ I++ D + LI S C A+ VF + + V ++I
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLI 89
Query: 390 VGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGI 449
+ QA +F++M R G+ T+ +L ACS + + N I G+
Sbjct: 90 RAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHN-HIEKLGL 148
Query: 450 EPTIEHYGCLVDILCRTGYL--EEAKSTIESMPMRPNFVIWMSLLSGARNHGN-KDIGEY 506
I L+D R G L +A E M R + V W S+L G G +D
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER-DTVSWNSMLGGLVKAGELRD---- 203
Query: 507 AANNLIKVAP--DTIGCYVVLSNIYAAAGQWDKVSEVREMMKKR 548
A L P D I +L YA + K E+ E M +R
Sbjct: 204 -ARRLFDEMPQRDLISWNTMLDG-YARCREMSKAFELFEKMPER 245
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/659 (34%), Positives = 372/659 (56%), Gaps = 13/659 (1%)
Query: 40 LHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVF 99
LH+ VK ++ + + L++ Y ++ AR++F+ IL +V++ ++ CYV
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAY--SVCGSVDSARTVFEGILCK-DIVVWAGIVSCYVE 224
Query: 100 NQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFV 159
N ++L L + +P+N+T +K + LGA K +HG + K + D V
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 160 LSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR-- 217
L+ +Y + G++ +VF+ M D+V W+ +I + + G A+ LF M +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 218 --DLFSWTCLVDG--FSKC-GKVEIAREIFYRMP-NRNLVSWNAMINGYMKAGDVDSACE 271
+ F+ + +++G KC G E + ++ + ++ NA+I+ Y K +D+A +
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 272 LFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAV 331
LF ++ ++ ++WN++I GYE G +A + L V + T SAL A A LA
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 332 LNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVG 391
++ G +H +K + LI MY+KCG I+ A +VF + V W A+I G
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Query: 392 LGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEP 451
HG+ QAL + + M KP +TF+GVL+ CS+AGL++ G+ F MI D+GIEP
Sbjct: 525 YSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEP 584
Query: 452 TIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNL 511
+EHY C+V +L R+G L++A IE +P P+ +IW ++LS + N N++ +A +
Sbjct: 585 CLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
Query: 512 IKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVG 571
+K+ P YV++SN+YA A QW V+ +R+ MK+ G +K+PG S IEH+G +H F VG
Sbjct: 645 LKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVG 704
Query: 572 DKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGL 631
HP I+ L + K AG+VPD VLL ++D+ EK+ L HSERLA+A+GL
Sbjct: 705 LSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDE-EKDKRLWVHSERLALAYGL 763
Query: 632 INV-KSRSPIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
+ + SR+ I I+KNLR+C+DCHS K++S I R++++RD +RFHHF G CSC D W
Sbjct: 764 VRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 168/363 (46%), Gaps = 6/363 (1%)
Query: 141 GKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVK 200
K IH + K G D F + L++ Y K G +FD M +++ VS+ L GY
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 201 KGEVEVAMKLFDEMPDRDLFSWTCLVDGFSKCGKVEIA----REIFYRMPNRNLVSWNAM 256
+ + + +L E + + +T + F K EI I + N A+
Sbjct: 128 QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL 187
Query: 257 INGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPND 316
IN Y G VDSA +F+ + +D++ W +++ Y NG F ++L+LL M + +PN+
Sbjct: 188 INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247
Query: 317 ATLVSALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRA 376
T +AL A GL + + +H I+K +V+D +G L+Q+Y++ G + A VF
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 377 ISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDG 436
+ K V W+ MI +G +A+DLF +M + P T +LN C+ G
Sbjct: 308 MPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLG 367
Query: 437 RRYFNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGAR 496
+ +++ G + I L+D+ + ++ A + + N V W +++ G
Sbjct: 368 EQLHGLVVK-VGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-NEVSWNTVIVGYE 425
Query: 497 NHG 499
N G
Sbjct: 426 NLG 428
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 13/263 (4%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+QLH L VK +S+ L+ +Y + A +F L + V +N +I Y
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYA--KCEKMDTAVKLFAE-LSSKNEVSWNTVIVGY 424
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+A ++F + L + T + A L ++ G Q+HGL K
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDR 217
V +SL+ MYAK G+I + VF+ M+ D+ SWN LI GY G A+++ D M DR
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 218 DL----FSWTCLVDGFSKCGKVEIAREIFYRMPNRN-----LVSWNAMINGYMKAGDVDS 268
D ++ ++ G S G ++ +E F M + L + M+ ++G +D
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 269 ACELFDDMEIR-DLITWNSMIAG 290
A +L + + ++ W +M++
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSA 627
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 39 QLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYV 98
Q+H L++KTN +S+ L+ +Y ++ +A+S+F+ ++ + +N LI Y
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYA--KCGDIKFAQSVFNE-METIDVASWNALISGYS 526
Query: 99 FNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKF 158
+ +AL + + DR P+ T V+ G + G I +G++ + + G +
Sbjct: 527 THGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGIEPC 585
Query: 159 V--LSSLVSMYAKFGEIDLGRRVFDAMD-DKDLVSWNCLIDGYVKKGEVEVAMKLFDEM 214
+ + +V + + G++D ++ + + + ++ W ++ + + E A + +E+
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEI 644
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/588 (35%), Positives = 342/588 (58%), Gaps = 14/588 (2%)
Query: 112 DLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFG 171
DL ++ D ++K + +G+ +H + + F D + ++L++MYAK G
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 172 EIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM------PDRDLFSWTCL 225
++ R+VF+ M +D V+W LI GY + A+ F++M P+ F+ + +
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE--FTLSSV 167
Query: 226 VDGFSK----CGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDL 281
+ + C ++ + N+ +A+++ Y + G +D A +FD +E R+
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 282 ITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSY 341
++WN++IAG+ +ALEL + ML P+ + S A + L +G+W+H+Y
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAY 287
Query: 342 IVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQA 401
++K+G + G L+ MY+K GSI A +F ++K+ V W +++ HG +A
Sbjct: 288 MIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEA 347
Query: 402 LDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVD 461
+ F +M R+G++P I+F+ VL ACSH+GL+++G Y+ +M D GI P HY +VD
Sbjct: 348 VWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVD 406
Query: 462 ILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGC 521
+L R G L A IE MP+ P IW +LL+ R H N ++G YAA ++ ++ PD G
Sbjct: 407 LLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGP 466
Query: 522 YVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEI 581
+V+L NIYA+ G+W+ + VR+ MK+ G +K+P S +E +H FV D+ HPQ +EI
Sbjct: 467 HVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Query: 582 HSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIR 641
K E+ K+K G+VPDT+ V++ + DQ+E+E L+ HSE++A+AF L+N S I
Sbjct: 527 ARKWEEVLAKIKELGYVPDTSHVIVHV-DQQEREVNLQYHSEKIALAFALLNTPPGSTIH 585
Query: 642 IVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
I KN+RVC DCH+ KL S + REIIVRD +RFHHFK+G+CSCKD+W
Sbjct: 586 IKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 16/348 (4%)
Query: 59 LLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLDRFL 118
LL++Y +L AR +F+++ Q V + LI Y + R +AL F +L
Sbjct: 101 LLNMYAK--CGSLEEARKVFEKMPQR-DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGY 157
Query: 119 LPDNFTLPCVIKGAA--RLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLG 176
P+ FTL VIK AA R G G Q+HG K GF + V S+L+ +Y ++G +D
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCC--GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA 215
Query: 177 RRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDL----FSWTCLVDGFSKC 232
+ VFDA++ ++ VSWN LI G+ ++ E A++LF M FS+ L S
Sbjct: 216 QLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSST 275
Query: 233 GKVEIAREIFYRM--PNRNLVSW--NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMI 288
G +E + + M LV++ N +++ Y K+G + A ++FD + RD+++WNS++
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335
Query: 289 AGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIVKNGFV 348
Y +G EA+ E M + PN+ + +S L+A + +L++G + + K+G V
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395
Query: 349 VDGVLGTLLIQMYSKCGSIESALTVFRAIS-KKKVGHWTAMIVGLGMH 395
+ ++ + + G + AL + + W A++ MH
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMH 443
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%), Gaps = 16/262 (6%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
QLH VK + + S LL LY + + A+ +FD L+ + V +N LI +
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGL--MDDAQLVFD-ALESRNDVSWNALIAGH 237
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDK 157
+ +AL LF +L P +F+ + + G +++GK +H + K G
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 158 FVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM--- 214
F ++L+ MYAK G I R++FD + +D+VSWN L+ Y + G + A+ F+EM
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 215 ---PDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNLV--SWN--AMINGYMKAGDVD 267
P+ S+ ++ S G ++ + M +V +W+ +++ +AGD++
Sbjct: 358 GIRPNE--ISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 268 SACELFDDMEIRDLIT-WNSMI 288
A ++M I W +++
Sbjct: 416 RALRFIEEMPIEPTAAIWKALL 437
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/588 (36%), Positives = 327/588 (55%), Gaps = 23/588 (3%)
Query: 120 PDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRV 179
P T +I ++ + ++H + G D F+ + L+ MY+ G +D R+V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 180 FDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMP----DRDLFSWT----------CL 225
FD + + WN L G E + L+ +M + D F++T C
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 226 VDGFSKCGKVEIAREIFYRMPNRNLVSWNAMINGYMKAGDVDSACELFDDMEIRDLITWN 285
V+ K GK EI + R + ++ +++ Y + G VD A +F M +R++++W+
Sbjct: 195 VNHLMK-GK-EIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 286 SMIAGYELNGRFMEALELLETML--IGDVLPNDATLVSALSAVAGLAVLNKGRWMHSYIV 343
+MIA Y NG+ EAL M+ D PN T+VS L A A LA L +G+ +H YI+
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 344 KNGFVVDGVLGTL--LIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQA 401
+ G +D +L + L+ MY +CG +E VF + + V W ++I G+HG +A
Sbjct: 313 RRG--LDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 402 LDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVD 461
+ +F +M G PT +TF+ VL ACSH GLV +G+R F M D+GI+P IEHY C+VD
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 462 ILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGNKDIGEYAANNLIKVAPDTIGC 521
+L R L+EA ++ M P +W SLL R HGN ++ E A+ L + P G
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 522 YVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSSSIEHRGVLHEFVVGDKSHPQTDEI 581
YV+L++IYA A WD+V V+++++ RG +K PG +E R ++ FV D+ +P ++I
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Query: 582 HSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAELENHSERLAIAFGLINVKSRSPIR 641
H+ L ++ +K G++P T VL +E + EKE + HSE+LA+AFGLIN PIR
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYELETE-EKERIVLGHSEKLALAFGLINTSKGEPIR 609
Query: 642 IVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFHHFKNGSCSCKDFW 689
I KNLR+C DCH TK +S +EI+VRD +RFH FKNG CSC D+W
Sbjct: 610 ITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 137/270 (50%), Gaps = 15/270 (5%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+++HA + H I + L+ +Y + YA +F + ++V ++ +I CY
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYA--RFGCVDYASYVFGGMPVR-NVVSWSAMIACY 258
Query: 98 VFNQRSHEALTLFCDLL--DRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGFGF 155
N ++ EAL F +++ + P++ T+ V++ A L A+++GK IHG + + G
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDS 318
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEM- 214
V+S+LV+MY + G++++G+RVFD M D+D+VSWN LI Y G + A+++F+EM
Sbjct: 319 ILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEML 378
Query: 215 ---PDRDLFSWTCLVDGFSKCGKVEIAREIFYRM-----PNRNLVSWNAMINGYMKAGDV 266
++ ++ S G VE + +F M + + M++ +A +
Sbjct: 379 ANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRL 438
Query: 267 DSACELFDDMEIRD-LITWNSMIAGYELNG 295
D A ++ DM W S++ ++G
Sbjct: 439 DEAAKMVQDMRTEPGPKVWGSLLGSCRIHG 468
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 249/673 (36%), Positives = 382/673 (56%), Gaps = 25/673 (3%)
Query: 35 KETQQLHALSVKTNLI-YHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLL 93
K+ +++H + T L+ + GI + L+++Y ++ AR +F + S V +N +
Sbjct: 330 KKGREVHGHVITTGLVDFMVGIGNGLVNMYA--KCGSIADARRVFYFMTDKDS-VSWNSM 386
Query: 94 IKCYVFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGAIKEGKQIHGLVFKLGF 153
I N EA+ + + +LP +FTL + A L K G+QIHG KLG
Sbjct: 387 ITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGI 446
Query: 154 GFDKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEV--AMKLF 211
+ V ++L+++YA+ G ++ R++F +M + D VSWN +I G + + E + A+ F
Sbjct: 447 DLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSII-GALARSERSLPEAVVCF 505
Query: 212 ------DEMPDRDLFSWTCLVDGFSKCGKVEIAREIFYRMPNRNL----VSWNAMINGYM 261
+ +R FS G E+ ++I N+ + NA+I Y
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFG--ELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 262 KAGDVDSACELFDDM-EIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLV 320
K G++D ++F M E RD +TWNSMI+GY N +AL+L+ ML +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 321 SALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKK 380
+ LSA A +A L +G +H+ V+ D V+G+ L+ MYSKCG ++ AL F + +
Sbjct: 624 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 683
Query: 381 KVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTA-ITFIGVLNACSHAGLVNDGRRY 439
W +MI G HG +AL LF M G P +TF+GVL+ACSHAGL+ +G ++
Sbjct: 684 NSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKH 743
Query: 440 FNMMINDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSG-ARNH 498
F M + YG+ P IEH+ C+ D+L R G L++ + IE MPM+PN +IW ++L R +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 499 GNK-DIGEYAANNLIKVAPDTIGCYVVLSNIYAAAGQWDKVSEVREMMKKRGFRKDPGSS 557
G K ++G+ AA L ++ P+ YV+L N+YAA G+W+ + + R+ MK +K+ G S
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYS 863
Query: 558 SIEHRGVLHEFVVGDKSHPQTDEIHSKLSEMRNKLKAAGHVPDTTQVLLCIEDQKEKEAE 617
+ + +H FV GDKSHP D I+ KL E+ K++ AG+VP T L +E Q+ KE
Sbjct: 864 WVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLE-QENKEEI 922
Query: 618 LENHSERLAIAFGLINVKSRS-PIRIVKNLRVCNDCHSVTKLLSGIYNREIIVRDNSRFH 676
L HSE+LA+AF L +S + PIRI+KNLRVC DCHS K +S I R+II+RD++RFH
Sbjct: 923 LSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFH 982
Query: 677 HFKNGSCSCKDFW 689
HF++G+CSC DFW
Sbjct: 983 HFQDGACSCSDFW 995
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 221/474 (46%), Gaps = 21/474 (4%)
Query: 38 QQLHALSVKTNLIYHSGISSRLLSLYVDPHINNLHYARSIFDRILQHPSLVLYNLLIKCY 97
+Q+H L K + + +S+ L+S+Y I ++ YA F I S V +N +I Y
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKC-IGSVGYALCAFGDIEVKNS-VSWNSIISVY 181
Query: 98 VFNQRSHEALTLFCDLLDRFLLPDNFTLPCVIKGAARLGA--IKEGKQIHGLVFKLGFGF 155
A +F + P +T ++ A L ++ +QI + K G
Sbjct: 182 SQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT 241
Query: 156 DKFVLSSLVSMYAKFGEIDLGRRVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLF---D 212
D FV S LVS +AK G + R+VF+ M+ ++ V+ N L+ G V++ E A KLF +
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301
Query: 213 EMPDRDLFSWTCLVDGFSKCGKVE-----IAREIFYRMPNRNLVSW-----NAMINGYMK 262
M D S+ L+ F + E RE+ + LV + N ++N Y K
Sbjct: 302 SMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAK 361
Query: 263 AGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVLPNDATLVSA 322
G + A +F M +D ++WNSMI G + NG F+EA+E ++M D+LP TL+S+
Sbjct: 362 CGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 323 LSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKV 382
LS+ A L G+ +H +K G ++ + L+ +Y++ G + +F ++ +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 383 GHWTAMIVGLGMHGMA-TQALDLFNKMCRMGMKPTAITFIGVLNACSHAGLVNDGRRYFN 441
W ++I L + +A+ F R G K ITF VL+A S G++
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 442 MMI-NDYGIEPTIEHYGCLVDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSG 494
+ + N+ E T E+ L+ + G ++ + M R + V W S++SG
Sbjct: 542 LALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 254 NAMINGYMKAGDVDSACELFDDMEIRDLITWNSMIAGYELNGRFMEALELLETMLIGDVL 313
N +IN Y++ GD SA ++FD+M +R+ ++W +++GY NG EAL L M+ +
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 314 PNDATLVSALSA---VAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKC-GSIES 369
N VS L A + + +L GR +H + K + VD V+ +LI MY KC GS+
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILF-GRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 370 ALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDLFNKMCRMGMKPTAITFIG-VLNACS 428
AL F I K W ++I G A +F+ M G +PT TF V ACS
Sbjct: 159 ALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS 218
Query: 429 HAGLVNDGRRYFNMMINDYGIEPTIEHYGCLVDI---------LCRTGYLEEAKSTIESM 479
L R ++ TI+ G L D+ ++G L A+ M
Sbjct: 219 ---LTEPDVRLLEQIM------CTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQM 269
Query: 480 PMRPNFVIWMSLLSGARNHGNKDIGEYAA------NNLIKVAPDTIGCYVVL 525
R N V L+ G + GE A N++I V+P++ YV+L
Sbjct: 270 ETR-NAVTLNGLMVGLV---RQKWGEEATKLFMDMNSMIDVSPES---YVIL 314
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 199/444 (44%), Gaps = 35/444 (7%)
Query: 119 LPDNFTLPCVI-KGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGR 177
+P +F CV +GAAR H ++K D ++ ++L++ Y + G+ R
Sbjct: 5 VPLSFVQSCVGHRGAARF--------FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSAR 56
Query: 178 RVFDAMDDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPDRDLFS----WTCLVDGFSKCG 233
+VFD M ++ VSW C++ GY + GE + A+ +M +FS + ++ + G
Sbjct: 57 KVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
Query: 234 KVEI--AREI----FYRMPNRNLVSWNAMINGYMKA-GDVDSACELFDDMEIRDLITWNS 286
V I R+I F + V N +I+ Y K G V A F D+E+++ ++WNS
Sbjct: 117 SVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNS 176
Query: 287 MIAGYELNGRFMEALELLETMLIGDVLPNDATLVSALSAVAGLAVLNKG--RWMHSYIVK 344
+I+ Y G A + +M P + T S ++ L + + I K
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 345 NGFVVDGVLGTLLIQMYSKCGSIESALTVFRAISKKKVGHWTAMIVGLGMHGMATQALDL 404
+G + D +G+ L+ ++K GS+ A VF + + ++VGL +A L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 405 FNKMCRMGMKPTAITFIGVLNACSHAGLVND-----GRRYFNMMINDYGIEPTIEHYGCL 459
F M M + + +++ +L++ L + GR +I ++ + L
Sbjct: 297 FMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 460 VDILCRTGYLEEAKSTIESMPMRPNFVIWMSLLSGARNHGN--KDIGEYAANNLIKVAPD 517
V++ + G + +A+ M + + V W S+++G +G + + Y + + P
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDS-VSWNSMITGLDQNGCFIEAVERYKSMRRHDILP- 413
Query: 518 TIGCYVVLSNIYAAAG-QWDKVSE 540
G + ++S++ + A +W K+ +
Sbjct: 414 --GSFTLISSLSSCASLKWAKLGQ 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,060,020
Number of Sequences: 539616
Number of extensions: 10681049
Number of successful extensions: 33289
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 23708
Number of HSP's gapped (non-prelim): 2027
length of query: 689
length of database: 191,569,459
effective HSP length: 124
effective length of query: 565
effective length of database: 124,657,075
effective search space: 70431247375
effective search space used: 70431247375
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)