Query 036241
Match_columns 367
No_of_seqs 261 out of 1992
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 10:49:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036241.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036241hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02883 Branched-chain amino 100.0 6.8E-86 1.5E-90 655.9 35.9 359 8-367 1-360 (384)
2 PLN02259 branched-chain-amino- 100.0 6.2E-84 1.3E-88 643.0 35.3 359 6-367 4-364 (388)
3 KOG0975 Branched chain aminotr 100.0 3.3E-84 7.2E-89 623.1 26.5 314 52-367 38-358 (379)
4 PLN02782 Branched-chain amino 100.0 1.4E-81 3E-86 628.9 36.3 315 53-367 64-379 (403)
5 PLN03117 Branched-chain-amino- 100.0 6.8E-71 1.5E-75 545.4 37.6 320 47-367 7-327 (355)
6 PRK13357 branched-chain amino 100.0 4.1E-65 8.8E-70 504.7 36.7 312 55-367 13-332 (356)
7 TIGR01123 ilvE_II branched-cha 100.0 4.2E-59 9.1E-64 454.4 32.1 283 85-367 1-290 (313)
8 TIGR01122 ilvE_I branched-chai 100.0 8.6E-56 1.9E-60 428.2 30.6 268 85-367 1-275 (298)
9 PRK06606 branched-chain amino 100.0 3.2E-54 7E-59 418.8 31.3 269 83-366 8-282 (306)
10 COG0115 IlvE Branched-chain am 100.0 3E-54 6.6E-59 415.0 29.5 266 82-367 2-271 (284)
11 cd01557 BCAT_beta_family BCAT_ 100.0 7.1E-54 1.5E-58 411.5 30.9 266 97-367 1-268 (279)
12 PRK12479 branched-chain amino 100.0 1.7E-53 3.7E-58 412.5 30.1 262 82-366 4-274 (299)
13 PRK07544 branched-chain amino 100.0 2.2E-53 4.8E-58 410.3 28.8 263 82-366 9-276 (292)
14 PRK08320 branched-chain amino 100.0 1.1E-52 2.4E-57 404.5 30.6 264 83-366 4-273 (288)
15 PRK13356 aminotransferase; Pro 100.0 1.3E-52 2.9E-57 403.8 30.9 261 83-366 8-272 (286)
16 cd01558 D-AAT_like D-Alanine a 100.0 1.4E-52 3.1E-57 399.7 29.9 259 85-366 1-264 (270)
17 PRK07650 4-amino-4-deoxychoris 100.0 2.3E-51 4.9E-56 394.6 30.1 260 84-366 2-265 (283)
18 PRK06680 D-amino acid aminotra 100.0 4.1E-51 8.8E-56 393.6 30.8 260 83-366 4-271 (286)
19 TIGR01121 D_amino_aminoT D-ami 100.0 4.3E-51 9.3E-56 391.5 30.0 256 84-366 2-265 (276)
20 PLN02845 Branched-chain-amino- 100.0 7.3E-51 1.6E-55 400.0 30.3 261 83-367 42-313 (336)
21 PRK12400 D-amino acid aminotra 100.0 1E-50 2.2E-55 391.6 30.6 260 83-366 6-272 (290)
22 PRK07849 4-amino-4-deoxychoris 100.0 2.3E-50 4.9E-55 389.6 30.3 260 83-366 8-278 (292)
23 TIGR03461 pabC_Proteo aminodeo 100.0 2.4E-50 5.2E-55 382.8 29.1 253 85-366 1-257 (261)
24 PRK06092 4-amino-4-deoxychoris 100.0 1.1E-49 2.4E-54 379.8 29.4 255 84-366 2-259 (268)
25 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 4E-49 8.7E-54 372.4 30.1 247 102-367 1-251 (256)
26 cd01559 ADCL_like ADCL_like: 4 100.0 2.3E-49 5E-54 373.8 27.8 240 102-366 1-243 (249)
27 PRK09266 hypothetical protein; 100.0 4.6E-48 1E-52 368.6 27.4 249 82-366 3-252 (266)
28 PF01063 Aminotran_4: Aminotra 100.0 1.9E-38 4.2E-43 294.5 23.5 218 128-366 1-225 (231)
29 PRK07546 hypothetical protein; 100.0 1.1E-36 2.3E-41 280.8 25.3 205 109-348 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 1.5E-28 3.2E-33 223.2 21.8 182 110-342 4-187 (187)
31 KOG3442 Uncharacterized conser 34.0 80 0.0017 27.0 4.6 40 137-180 58-98 (132)
32 PF15507 DUF4649: Domain of un 33.4 42 0.00091 25.9 2.6 41 318-358 11-53 (72)
33 TIGR00829 FRU PTS system, fruc 26.1 1.1E+02 0.0023 24.1 3.9 45 307-355 21-75 (85)
34 cd05569 PTS_IIB_fructose PTS_I 23.9 1.5E+02 0.0032 23.7 4.4 48 304-355 19-75 (96)
35 PF09778 Guanylate_cyc_2: Guan 23.0 96 0.0021 28.9 3.5 29 302-330 91-119 (212)
36 PRK10474 putative PTS system f 22.2 1.4E+02 0.003 23.6 3.9 37 304-340 4-49 (88)
37 PF13051 DUF3912: Protein of u 20.4 98 0.0021 22.8 2.4 38 277-314 31-68 (68)
No 1
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=6.8e-86 Score=655.89 Aligned_cols=359 Identities=62% Similarity=0.990 Sum_probs=330.2
Q ss_pred HHhhhccceeccCccccccccceeeecccccccccCC-CCCCcccCCCccCCCCCCCCCCccccCCceEEEEEcCCceee
Q 036241 8 ACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQP-GKPSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFK 86 (367)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ 86 (367)
++||+||++.+++| |+.|+++++.+++++..+.... ....-...++..+++||++|+||.+|||||++++|+.+++|.
T Consensus 1 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ 79 (384)
T PLN02883 1 MALRRCLPQSSTTS-SYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFE 79 (384)
T ss_pred Cchhhhccccccch-hhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCccc
Confidence 47999999998887 9999999999999988554322 111111456677899999999999999999999999888999
Q ss_pred CCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcC
Q 036241 87 QGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANK 166 (367)
Q Consensus 87 ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~ 166 (367)
+|+|+|+++++|+|++++|||||+||||||+|++.||++++||+++|++||++||++|+||.++.++|+++|+++++.|.
T Consensus 80 ~~~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~ 159 (384)
T PLN02883 80 QGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANR 159 (384)
T ss_pred CCeEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHH
Q 036241 167 RWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPV 246 (367)
Q Consensus 167 ~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~ 246 (367)
.|||+.+.+++||||+++++++.+|+.++.+++++|+++|+++|+++|++++++.+++.++|++|++++++|++|||+++
T Consensus 160 ~wvp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ 239 (384)
T PLN02883 160 RWVPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPV 239 (384)
T ss_pred ccCCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHH
Confidence 99999877899999999999888899988889999999999999988888999999888899999999999999999999
Q ss_pred HHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHH
Q 036241 247 LKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDE 326 (367)
Q Consensus 247 ~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~e 326 (367)
++++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++|||||||++||++|+++|++|+||+|+++|
T Consensus 240 lla~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~e 319 (384)
T PLN02883 240 LEVMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEE 319 (384)
T ss_pred HHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHH
Confidence 99999999999999999997556899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeEEEccccceEEeEEEEECCEEEEeCCCccccccC
Q 036241 327 LINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE 367 (367)
Q Consensus 327 L~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~~ 367 (367)
|.+|||+|+|||+++|+||++|+++++.+.+..+.||+|++
T Consensus 320 L~~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~ 360 (384)
T PLN02883 320 LKEAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQ 360 (384)
T ss_pred HHhCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHH
Confidence 99999999999999999999999888876444445888763
No 2
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=6.2e-84 Score=643.04 Aligned_cols=359 Identities=72% Similarity=1.130 Sum_probs=331.4
Q ss_pred hHHHhhhccceeccCccccccccceeeecccccccccCC-CC-CCcccCCCccCCCCCCCCCCccccCCceEEEEEcCCc
Q 036241 6 GAACLRNLIHLFRPASSSLTSKLGACYFCTSHVASLQQP-GK-PSVFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHE 83 (367)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~ 83 (367)
-+.+||+.|.++++. ++++++++.+++++..+.... +. +.-...++..+++||++|+||.++||||++++|+.++
T Consensus 4 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~~td~m~~~~~~~~~ 80 (388)
T PLN02259 4 TITSLRKTLVLPLHL---HIRTLQTFAKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSKDG 80 (388)
T ss_pred chhhhhhheEeeeeh---hhhhhhhhhhhccccccccchhhccccccccccccccCCccccCCCCcccCceEEEEECCCC
Confidence 478999999999988 789999999999888443222 11 1111456666899999999999999999999999888
Q ss_pred eeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIAL 163 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~ 163 (367)
+|.||+++|++++.|+|.|++||||||||||||+|+..||++++||+++|++||++||++|+||.++.++|.++|+++++
T Consensus 81 ~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~ 160 (388)
T PLN02259 81 EFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTAL 160 (388)
T ss_pred eEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCc
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNY 243 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY 243 (367)
.|..|||+.+.+++||||+++|+++.+|+.|+.+++++|+++|+++|+++|++++++.+.+++.|++|++++++|+++||
T Consensus 161 ~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~~~NY 240 (388)
T PLN02259 161 ANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSITNY 240 (388)
T ss_pred hccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhhhhcCcceEEEEeecceeccCCCCCcccchhhhH
Confidence 99999999877899999999998888899888889999999999999888888899988778999999999999998899
Q ss_pred hHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeC
Q 036241 244 APVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIP 323 (367)
Q Consensus 244 ~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~ 323 (367)
+++++++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++|||||||++||++|+++|++|+||+++
T Consensus 241 ~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~~~iL~GITR~sIl~la~~~G~~V~Er~i~ 320 (388)
T PLN02259 241 APVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKAVH 320 (388)
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEEEEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 99999999999999999999997668999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCccccccC
Q 036241 324 VDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE 367 (367)
Q Consensus 324 ~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~~ 367 (367)
++||.+|||+|+|||+++|+||++|+++|+.+.++++.||+|++
T Consensus 321 ~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~~g~~t~~ 364 (388)
T PLN02259 321 VDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQK 364 (388)
T ss_pred HHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCCCCHHHHH
Confidence 99999999999999999999999999988988888777898864
No 3
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-84 Score=623.14 Aligned_cols=314 Identities=55% Similarity=0.948 Sum_probs=300.7
Q ss_pred CCCccCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChH
Q 036241 52 SDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPD 131 (367)
Q Consensus 52 ~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d 131 (367)
.+.....+||++|+||.+|||||++++|..++ |..|+|.|++++.+||++.+|||||++||||||||+.||++++|||+
T Consensus 38 ~~~k~~~~d~~~L~fg~~~td~m~~~k~~~~g-w~~~~I~p~gni~~~Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrPd 116 (379)
T KOG0975|consen 38 TDEKPAPIDWDELGFGLVFTDHMLTIKWSEDG-WSQGEISPFGNLSLHPAAKVLHYGQGLFEGLKAYRTEDGKIRLFRPD 116 (379)
T ss_pred CCCccCcCCHHHhccCCcccceeEEEeccccC-cCCCCccCcCCEeeChhhhceecchhhccccccccCCCCeEEEecch
Confidence 35556688999999999999999999999555 99999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcc
Q 036241 132 LNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYF 211 (367)
Q Consensus 132 ~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~ 211 (367)
.|+.||++||.|++||.|+.+++.++|++++.+|++|||+..+++|||||+++|+++.+|+.++++++|+++++|+++||
T Consensus 117 ~N~~Rm~~sA~r~~lP~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~~~~e~~l~vi~spvg~yf 196 (379)
T KOG0975|consen 117 QNMDRMLRSAERACLPSPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVSPAPEATLFVIVSPVGPYF 196 (379)
T ss_pred hhHHHHHhhhhhccCCCCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccccCCcceEEEEEcccchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCE--EE
Q 036241 212 KEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNV--IS 289 (367)
Q Consensus 212 ~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~--l~ 289 (367)
+.|+++++|.+++.++|++|+|+|+.|+++||+++++++.||+++||+|+||||.. +++|+|+++||||++++++ ++
T Consensus 197 ~~g~~~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d-~~~ItEv~tmNiF~v~~n~~elv 275 (379)
T KOG0975|consen 197 KSGFKGVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGD-GGYITEVGTMNIFMVKKNEDELV 275 (379)
T ss_pred cccccceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecC-CCceeeccceeEEEEEcCceeEe
Confidence 99999999999999999999999999999999999999999999999999999985 4599999999999999888 99
Q ss_pred ccCCCCCCccchHHHHHHHHHHHCC-CcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEE---EEeCCC-cccc
Q 036241 290 TPATNGTILEGITRRSVIEIARDYG-YQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKR---VEFKTG-SRSV 364 (367)
Q Consensus 290 TP~l~~~ILpGITR~sil~la~~~G-~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~---~~~~~~-~G~v 364 (367)
||++++.|||||||++|+++|+++| ++|+||.++++|+.+|+|+|+||||++|.||.+|.|.++. -.+++| .||+
T Consensus 276 TPp~dg~ILpGvTR~sileLa~~~g~~~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g~l 355 (379)
T KOG0975|consen 276 TPPLDGTILPGVTRKSILELARDLGEFKVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEGPL 355 (379)
T ss_pred cCCCCCcccCCccHHHHHHHHHHhCceEEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCccHH
Confidence 9999999999999999999999999 9999999999999999999999999999999999999944 355788 8999
Q ss_pred ccC
Q 036241 365 YQE 367 (367)
Q Consensus 365 t~~ 367 (367)
+++
T Consensus 356 ~~~ 358 (379)
T KOG0975|consen 356 AKK 358 (379)
T ss_pred HHH
Confidence 864
No 4
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.4e-81 Score=628.94 Aligned_cols=315 Identities=70% Similarity=1.181 Sum_probs=300.6
Q ss_pred CCccCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHh
Q 036241 53 DDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDL 132 (367)
Q Consensus 53 ~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~ 132 (367)
.++..++||++|+||+++||||++++|+.+++|.||+|+|++++.|+|.|++||||||||||||+|++.||++++|||++
T Consensus 64 ~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d~ 143 (403)
T PLN02782 64 VTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPEE 143 (403)
T ss_pred CcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChHH
Confidence 44456899999999999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCccc
Q 036241 133 NASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFK 212 (367)
Q Consensus 133 Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~ 212 (367)
|++||++||++|+||.++.++|+++|+++++.|..|||+.+.+++||||+++|+++.+|+.++++++++|+++|+++|++
T Consensus 144 H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~~ 223 (403)
T PLN02782 144 NAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFK 223 (403)
T ss_pred HHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECccccc
Confidence 99999999999999999999999999999999999999987789999999999888889988888999999999999988
Q ss_pred CCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccC
Q 036241 213 EGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPA 292 (367)
Q Consensus 213 ~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~ 292 (367)
.|.+++++.+.+++.|++|++++++|++|||+++++++++|+++||+|+||||..++|+|+|+++||||++++++|+||+
T Consensus 224 ~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~ 303 (403)
T PLN02782 224 EGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPA 303 (403)
T ss_pred cCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcCC
Confidence 88889999998789999999999999999999999999999999999999999755799999999999999999999999
Q ss_pred CCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 293 TNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 293 l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
++++|||||||++||++|+++|++|+||.|+++||.+|||||+|||+++|+||++|.|+|+.+.++++ +||+|++
T Consensus 304 l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~ 379 (403)
T PLN02782 304 IKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQ 379 (403)
T ss_pred CcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988877 8999864
No 5
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=6.8e-71 Score=545.44 Aligned_cols=320 Identities=61% Similarity=1.087 Sum_probs=290.6
Q ss_pred CCcccCCCcc-CCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeE
Q 036241 47 PSVFSSDDEY-ADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRI 125 (367)
Q Consensus 47 ~~~~~~~~~~-~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i 125 (367)
|+-++...++ .++||++|+||.+|||||+.++|..+.+|.||+++|.+++.|++.|++||||||||||||+|+..||++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i 86 (355)
T PLN03117 7 PLPTSKADEKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRI 86 (355)
T ss_pred CCCCCCccccccccCccccCCCccccCceEEEEcCCCCeEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcE
Confidence 4444444444 789999999999999999999998778999999999999999999999999999999999998889999
Q ss_pred EEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEe
Q 036241 126 LLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYAS 205 (367)
Q Consensus 126 ~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~ 205 (367)
++|++++|++||.+||++|+||.++.++|.+.|.++++.+..|+|+...+.+||||+++|.++..|+.+++++.+++++.
T Consensus 87 ~lf~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~~~~~~~i~~~ 166 (355)
T PLN03117 87 TLFRPDQNALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYAS 166 (355)
T ss_pred eeeCcHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCCCCcEEEEEEE
Confidence 99999999999999999999998899999999999999999999877667889999887777667887766788889999
Q ss_pred ccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEEC
Q 036241 206 PVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKG 285 (367)
Q Consensus 206 P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~ 285 (367)
|.++++.. .+++++.+.+++.|+.|.+++++|+++||+.++++.++|+++||||+||+|..++|+|+|++++|||+++|
T Consensus 167 p~~~~~~~-~~gi~l~~~~~~~r~~~~~l~~~K~~~nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNlF~v~~ 245 (355)
T PLN03117 167 PVGNYHKA-SSGLNLKVDHKHRRAHSGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNIFILKG 245 (355)
T ss_pred eccccccC-CCCEEEEEcCceEeCCCCCccchhhhhhhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEEC
Confidence 98766542 36788887666889999899999997799999999999999999999999974347999999999999999
Q ss_pred CEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCccccc
Q 036241 286 NVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVY 365 (367)
Q Consensus 286 ~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt 365 (367)
++|+||+++.+||+||||++|+++|+++|++|+|+.++++||.+|||+|+|||+++|+||.+|++.++.+.++++.||+|
T Consensus 246 ~~l~TP~l~~~iL~GItR~~vl~la~~~Gi~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~~~~~ 325 (355)
T PLN03117 246 NIVSTPPTSGTILPGVTRKSISELARDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEEALS 325 (355)
T ss_pred CEEEeCCCcCCCCCCHHHHHHHHHHHHCCCEEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888888888778998
Q ss_pred cC
Q 036241 366 QE 367 (367)
Q Consensus 366 ~~ 367 (367)
++
T Consensus 326 ~~ 327 (355)
T PLN03117 326 TK 327 (355)
T ss_pred HH
Confidence 64
No 6
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.1e-65 Score=504.67 Aligned_cols=312 Identities=43% Similarity=0.775 Sum_probs=279.6
Q ss_pred ccCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHH
Q 036241 55 EYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNA 134 (367)
Q Consensus 55 ~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl 134 (367)
.+..+||++||||+.++|||+++.|+++. |.||+++|.+++.|++.|++|+||||||||+|+|++.+|++++|++++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~l~~Hl 91 (356)
T PRK13357 13 EKRAIDWANLGFGYVFTDHMVVIDYKDGK-WHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFRPDANA 91 (356)
T ss_pred cccCCCccccCCCccccceeEEEEecCCc-ccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeChHHHH
Confidence 34577999999999999999999998754 99999999999999999999999999999999998889999999999999
Q ss_pred HHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCC-CCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccC
Q 036241 135 SRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPP-PGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKE 213 (367)
Q Consensus 135 ~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~-~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~ 213 (367)
+||.+||++|+||.++.++|.+.+.++++.+..++++ ..++.+|||+++.++...+|+.+.+.+.+++++.|.++++..
T Consensus 92 ~RL~~Sa~~L~i~~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~ 171 (356)
T PRK13357 92 KRLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAEEYIFCVIASPVGAYFKG 171 (356)
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCCCccEEEEEEEechhhccc
Confidence 9999999999999778999999999999999876533 234578999988766556677665678899999988777666
Q ss_pred CCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCC
Q 036241 214 GSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPAT 293 (367)
Q Consensus 214 g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l 293 (367)
+.+++++.+...+.|..|..++++|+..||+.+++++++|+++||||+|++|.+++|+|+|++++|||++++++++|||+
T Consensus 172 ~~~~v~l~~~~~~~r~~~~~l~~~Kt~~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNlF~v~~~~l~TPpl 251 (356)
T PRK13357 172 GVKPVSIWVSDEYDRAAPGGTGAAKVGGNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNFFFITKDGTVTPPL 251 (356)
T ss_pred CCCceEEEEcCCeEecCCCCcchhhcccccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEEEEEECCEEEECCC
Confidence 66788887766788998888899999669999999999999999999999996447999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHCCCcEEEEEeCHHH------HhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 294 NGTILEGITRRSVIEIARDYGYQVEERVIPVDE------LINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 294 ~~~ILpGITR~sil~la~~~G~~V~Er~i~~~e------L~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+.+||+||||+.|+++|+++|++|+|++++++| |.+|||+|+|||+.+|+||.+|+++++...++++ +||+++
T Consensus 252 ~~giL~GItR~~vlela~~~Gi~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~g~~t~ 331 (356)
T PRK13357 252 SGSILPGITRDSLLQLAEDLGLTVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEVGPVTQ 331 (356)
T ss_pred CCCCCcchHHHHHHHHHHHCCCeEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCCChHHH
Confidence 999999999999999999999999999999999 8999999999999999999999766656677777 899986
Q ss_pred C
Q 036241 367 E 367 (367)
Q Consensus 367 ~ 367 (367)
+
T Consensus 332 ~ 332 (356)
T PRK13357 332 K 332 (356)
T ss_pred H
Confidence 3
No 7
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=4.2e-59 Score=454.37 Aligned_cols=283 Identities=47% Similarity=0.849 Sum_probs=252.9
Q ss_pred eeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 036241 85 FKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALA 164 (367)
Q Consensus 85 w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~ 164 (367)
|.||+++|.+++.|++.|++|+||||||||||+|+..+|++++|++++|++||.+||++|+||.++.++|.+.+.++++.
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~~~~~~l~~~l~~~~~~ 80 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPELPDELFLEALRQLVKA 80 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999997778999899999999999999999999987999999999999999
Q ss_pred cCCCCCCCC-CceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCc
Q 036241 165 NKRWVPPPG-KGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNY 243 (367)
Q Consensus 165 ~~~~vP~~~-~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY 243 (367)
+..++|+.. ++.+|||+++.+.++.+|+.+++.+.++|++.|.++++..|.+++++.+...+.|..|..++++|+.+||
T Consensus 81 ~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~~~ny 160 (313)
T TIGR01123 81 NKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASPVGAYFKGGLAPVSIFVTTEYDRAAPGGTGAVKVGGNY 160 (313)
T ss_pred ccccCCCCCCCCcEEEEeEEEecCCccccCCCCccEEEEEEEEchhhccccccceeEEecccceecCCCCCccceecccc
Confidence 987765432 4578999988766666788766678888888888777766777777766567788888878999996699
Q ss_pred hHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEEC-CEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEe
Q 036241 244 APVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKG-NVISTPATNGTILEGITRRSVIEIARDYGYQVEERVI 322 (367)
Q Consensus 244 ~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~-~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i 322 (367)
+.+++++++|+++||||+|++|.+.+|+|+|++++|+|++++ |+|+|||++.+||+||||+.|+++|+++|++|+|+++
T Consensus 161 l~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~Gi~v~e~~i 240 (313)
T TIGR01123 161 AASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDLGMEVEERRI 240 (313)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999973234599999999999985 7999999999999999999999999999999999999
Q ss_pred CHHHHhhc----ceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 323 PVDELINA----DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 323 ~~~eL~~a----dEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
+++||.+| ||+|+|||+.+|+||.+|.++++.+.+++| +||++++
T Consensus 241 ~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~ 290 (313)
T TIGR01123 241 DIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKA 290 (313)
T ss_pred CHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHH
Confidence 99999999 999999999999999999888888778877 8999863
No 8
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=8.6e-56 Score=428.16 Aligned_cols=268 Identities=31% Similarity=0.521 Sum_probs=233.9
Q ss_pred eeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHH
Q 036241 85 FKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIAL 163 (367)
Q Consensus 85 w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv~ 163 (367)
|.||+++|.+++.+++.|++|+||||+|||||+|++.||. ++|++++|++||.+||++|+|+.+ +.++|.+.+.++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 79 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGP-AIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLR 79 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcc-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999776643 589999999999999999999866 79999999999999
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccCC--CccEEEEeecceeecCCCCC-CCcc
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKEG--SAPLNLYIEEEFVRAAPGGA-GGVK 238 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g--~~~v~l~v~~~~~R~~p~g~-g~~K 238 (367)
.+.. ...|||++++.+.+.+|+.+. .++.++|++.|.+.++... .+++++.+.+ +.|..+..+ +++|
T Consensus 80 ~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~~-~~r~~~~~~~~~~K 151 (298)
T TIGR01122 80 KNNL-------RSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVSS-WRRNAPNTIPTAAK 151 (298)
T ss_pred hcCC-------CCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEEE-EEcCCCCCcCccch
Confidence 8763 357999877655445677653 2578888888886654321 2467777654 677776664 8999
Q ss_pred cccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEE
Q 036241 239 AISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVE 318 (367)
Q Consensus 239 t~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~ 318 (367)
+.+||+.++++.++|+++|+||+||+|. +|+|+|++++|+|++++++|+||+++.+||+||||+.|+++|+++|++|+
T Consensus 152 ~~~~yl~~v~a~~~a~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~~~~~~L~GItR~~il~la~~~g~~v~ 229 (298)
T TIGR01122 152 AGGNYLNSLLAKSEARRHGYDEAILLDV--EGYVAEGSGENIFIVKDGVLFTPPVTSSILPGITRDTVITLAKELGIEVV 229 (298)
T ss_pred hhhhhHHHHHHHHHHHHcCCCEEEEECC--CCCEEECCceEEEEEECCEEECCCCCCCcCcchHHHHHHHHHHHcCCcEE
Confidence 9877999999999999999999999996 79999999999999999999999999999999999999999999999999
Q ss_pred EEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 319 ERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 319 Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++
T Consensus 230 e~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~~~~g~~~~~ 275 (298)
T TIGR01122 230 EQPISREELYTADEAFFTGTAAEITPIREV--DGRKI--GNGRRGPVTKK 275 (298)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CCEEC--CCCCCChHHHH
Confidence 999999999999999999999999999999 67654 777 8998753
No 9
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=3.2e-54 Score=418.82 Aligned_cols=269 Identities=33% Similarity=0.533 Sum_probs=234.9
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
..|.||+++|..++.+++.|++|+||||||||+|+|++.+|+. +|++++|++||.+||++|+|+.+ +.++|.+.+.++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~~-~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~ 86 (306)
T PRK06606 8 YIWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGPA-IFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREV 86 (306)
T ss_pred cEEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCCe-eeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 5799999999999999999999999999999999998877763 88999999999999999999976 789999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCcccccCC-CceEEEEEEeccCCcccC-C-CccEEEEeecceeecCCCC-CCCc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA-PEYTFLAYASPVGNYFKE-G-SAPLNLYIEEEFVRAAPGG-AGGV 237 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~-~~~~~~I~~~P~~~~~~~-g-~~~v~l~v~~~~~R~~p~g-~g~~ 237 (367)
++.+.. ...|||++++.+.+.+|+.+. ..+.+++++.|.++++.. + .+++++.+.+ +.|..+.. ++.+
T Consensus 87 i~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 158 (306)
T PRK06606 87 VRKNNL-------KSAYIRPLVFVGDEGLGVRPHGLPTDVAIAAWPWGAYLGEEALEKGIRVKVSS-WTRHAPNSIPTRA 158 (306)
T ss_pred HHhcCC-------CCEEEEEEEEecCCccCcCCCCCCceEEEEEeccccccCcccccCCeEEEEee-EecCCCCCcCcch
Confidence 998762 367999887755545677654 356788888887665432 2 2467777654 67776655 4789
Q ss_pred ccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcE
Q 036241 238 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQV 317 (367)
Q Consensus 238 Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V 317 (367)
|+.+||+.++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.+||+||||+.|+++|+++|++|
T Consensus 159 K~~~nyl~~vla~~ea~~~G~de~l~l~~--~g~v~E~~~sNlf~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~g~~v 236 (306)
T PRK06606 159 KASGNYLNSILAKTEARRNGYDEALLLDV--EGYVSEGSGENIFIVRDGVLYTPPLTSSILEGITRDTVITLAKDLGIEV 236 (306)
T ss_pred hhhhccHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEECCCCcCCcCCCHHHHHHHHHHHHcCCcE
Confidence 98779999999999999999999999996 7999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 318 EERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 318 ~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+|++++++||.+|||+|+|||+++|+||.+| +++.+ ++| +||+++
T Consensus 237 ~e~~i~~~eL~~AdevfltnS~~gi~PV~~i--d~~~~--~~g~~g~~~~ 282 (306)
T PRK06606 237 IERRITRDELYIADEVFFTGTAAEVTPIREV--DGRQI--GNGKRGPITE 282 (306)
T ss_pred EEEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CcEEC--CCCCCCHHHH
Confidence 9999999999999999999999999999998 77655 776 899875
No 10
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3e-54 Score=414.97 Aligned_cols=266 Identities=40% Similarity=0.608 Sum_probs=229.3
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQ 160 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~ 160 (367)
+.+|.||+++|.+++.+++.|+++|||++||||+|+|+ |+ +|++++|++||++||++|+||.+ +.+++......
T Consensus 2 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~---g~--~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~ 76 (284)
T COG0115 2 GKIWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYN---GK--LFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQL 76 (284)
T ss_pred CeEeECCEEccCcccccCcccceeccccceeEEEEEeC---Cc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999999999999999995 43 89999999999999999999998 55555555555
Q ss_pred HHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCC--ccEEEEeecceeecCCCCCCCcc
Q 036241 161 IALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGS--APLNLYIEEEFVRAAPGGAGGVK 238 (367)
Q Consensus 161 lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~--~~v~l~v~~~~~R~~p~g~g~~K 238 (367)
+++.+ .|.+ .+|+||++++++..+|+.+..++.+.++++|+++|++.+. +++.+.+.+. .|..|.+++..|
T Consensus 77 ~~~~~-~~~~-----~~y~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~~~~~ 149 (284)
T COG0115 77 LLAKN-NLVP-----GLYIRPLVRGGGGGLGVRDATEPTLIVAASPVGAYLKGGRLEKGVVLVISSP-VRRAPPGPGAAK 149 (284)
T ss_pred HHHhh-CCCC-----ceEEEEEEEeecCCCCcCCCCccEEEEEEEecccccCcccccCCeEEEEeeh-hhccCCCcchhh
Confidence 55544 4432 2999999999888889888778999999999999988763 5666665543 455555444444
Q ss_pred cccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEE-CCEEEccCCCCCCccchHHHHHHHHHHHCCCcE
Q 036241 239 AISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVK-GNVISTPATNGTILEGITRRSVIEIARDYGYQV 317 (367)
Q Consensus 239 t~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V 317 (367)
.++||+.+++++++|+++|++|+|++|. +|+|+|++++|+|+++ |++++||+++.+|||||||++||++|+++|++|
T Consensus 150 k~~~y~~~~~a~~~A~~~G~~eal~~~~--~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~G~~v 227 (284)
T COG0115 150 KTGNYLSSVLAKREAKAAGADEALLLDE--DGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKELGLTV 227 (284)
T ss_pred hhcccHHHHHHHHHHHHCCCCEEEEecC--CCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHcCceE
Confidence 4469999999999999999999999996 7999999999999999 889999999999999999999999999999999
Q ss_pred EEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCccccccC
Q 036241 318 EERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQE 367 (367)
Q Consensus 318 ~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~~ 367 (367)
+|++|+.+||.+|||+|+|||+++|+||..| +++ . ..+||+|++
T Consensus 228 ~E~~i~~~~l~~adevf~t~t~~~v~PV~~i--~~~-~---~~~gpit~~ 271 (284)
T COG0115 228 EERPITLEDLKQADEVFLTNTAAGVTPVGLI--DGR-V---GQPGPVTKK 271 (284)
T ss_pred EEeecCHHHHhhCCEEEEEccceEEEEEEEE--CCc-c---CCCChHHHH
Confidence 9999999999999999999999999999999 555 3 228999864
No 11
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=7.1e-54 Score=411.46 Aligned_cols=266 Identities=48% Similarity=0.813 Sum_probs=232.7
Q ss_pred ccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCce
Q 036241 97 ELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGT 176 (367)
Q Consensus 97 ~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~ 176 (367)
++++.|++|+||||||||+|+|+..||+.++|++++|++||.+||++|+|+.++.++|.+.+.++++.+..|.|......
T Consensus 1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~~i~~~~~~~~~~~~~~ 80 (279)
T cd01557 1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFIDAIKELVKLDADWVPYGGGAS 80 (279)
T ss_pred CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence 47899999999999999999998666666689999999999999999999966999999999999999999977655567
Q ss_pred EEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhC
Q 036241 177 LYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSR 256 (367)
Q Consensus 177 lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~ 256 (367)
.|||+++++....+|+.++..++++|++.|.++++....+++++.+. ++.|..|...+.+|+..||+.+++++++|+++
T Consensus 81 ~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~K~~~nyl~~vla~~eA~~~ 159 (279)
T cd01557 81 LYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFKGGEKGVSALVS-SFRRAAPGGPGAAKAGGNYAASLLAQKEAAEK 159 (279)
T ss_pred EEEEEEEEeccccCCcCCCCccEEEEEEEEccccccCCCCCeEEEEe-eEEcCCCCCCcccchhhccHHHHHHHHHHHHC
Confidence 89999887655556776655678888888887665433356777765 57788786677899867999999999999999
Q ss_pred CCceEEEEeccCC-CeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEE
Q 036241 257 GFSDVLYLDSVNR-KNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFC 335 (367)
Q Consensus 257 G~de~L~ld~~~~-g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~ 335 (367)
|+||+|++|. + |+|+|++++|+|++++++|+||+++.++|+||||+.|+++|+++|++|+|++++++||.+|||+|+
T Consensus 160 g~de~l~ld~--~~g~v~E~~~sNlf~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~Gi~v~e~~i~~~~l~~ade~f~ 237 (279)
T cd01557 160 GYDQALWLDG--AHGYVAEVGTMNIFFVKDGELITPPLDGSILPGITRDSILELARDLGIKVEERPITRDELYEADEVFA 237 (279)
T ss_pred CCCEEEEEcC--CCCEEEEeCcEEEEEEECCEEEcCCCcCCCCCchHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEE
Confidence 9999999996 6 999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 336 TGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 336 ~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
|||+.+|+||.+| +++.+.++++ +||++++
T Consensus 238 ~ns~~gi~pV~~i--~~~~~~~~~~~~gp~~~~ 268 (279)
T cd01557 238 TGTAAVVTPVGEI--DYRGKEPGEGEVGPVTKK 268 (279)
T ss_pred ecceeEEEEEEEE--ccccccCCCCCCCHHHHH
Confidence 9999999999998 7776544666 7998863
No 12
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.7e-53 Score=412.55 Aligned_cols=262 Identities=29% Similarity=0.424 Sum_probs=227.0
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQ 160 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~ 160 (367)
+..|.||+++|..++.|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+
T Consensus 4 ~~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~ 78 (299)
T PRK12479 4 QYIYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSY---GGN--VFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQ 78 (299)
T ss_pred cEEEECCEEeEHHHCccccccchhheeeeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999998 565 78899999999999999999876 79999999999
Q ss_pred HHHHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCc----ccCCCccEEEEeecceeecCCCCC
Q 036241 161 IALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNY----FKEGSAPLNLYIEEEFVRAAPGGA 234 (367)
Q Consensus 161 lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~----~~~g~~~v~l~v~~~~~R~~p~g~ 234 (367)
+++.+.. ...|||+.+..+++.+|+.+. .++.++|++.|.+.+ +.+| +++.+. .+.|..|..+
T Consensus 79 ~i~~~~~-------~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~g---v~~~~~-~~~r~~~~~~ 147 (299)
T PRK12479 79 TLQKNEY-------ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDNG---LSVVSV-ASRRNTPDAL 147 (299)
T ss_pred HHHHcCC-------CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhCC---eEEEEE-eEeccCCCcc
Confidence 9988652 356899877654445677654 346788888876532 3334 555544 3677766655
Q ss_pred -CCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHC
Q 036241 235 -GGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDY 313 (367)
Q Consensus 235 -g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~ 313 (367)
..+|+. ||+.+++++++|+++|+||+||+|. +|+|+|++++|+|++++++|+||+++.++||||||+.|+++++++
T Consensus 148 ~~~~K~~-nyl~~vla~~ea~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~l~~giL~GItR~~il~~~~~~ 224 (299)
T PRK12479 148 DPRIKSM-NYLNNVLVKIEAAQAGVLEALMLNQ--QGYVCEGSGDNVFVVKDGKVLTPPSYLGALEGITRNSVIELCERL 224 (299)
T ss_pred Cccchhh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHc
Confidence 589996 9999999999999999999999996 799999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 314 GYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 314 G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
|++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+++
T Consensus 225 g~~v~e~~i~~~~L~~adevfltnS~~gi~PV~~i--d~~~~--~~~~~g~~~~ 274 (299)
T PRK12479 225 SIPCEERPFTRHDVYVADEVFLTGTAAELIPVVKV--DSREI--GDGKPGSVTK 274 (299)
T ss_pred CCeEEEEeCCHHHHHhCCeeeeecCcccEEEEEEE--CCEEc--CCCCcCHHHH
Confidence 99999999999999999999999999999999998 77765 666 799875
No 13
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=2.2e-53 Score=410.31 Aligned_cols=263 Identities=30% Similarity=0.460 Sum_probs=224.1
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQ 160 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~ 160 (367)
+..|.||+++|..++.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+
T Consensus 9 ~~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~ 83 (292)
T PRK07544 9 GFIWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAY---GGK--IFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKE 83 (292)
T ss_pred CeEEECCEEEEhHHCccChhhhHhhhcceeEEeeEee---CCc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 3579999999999999999999999999999999998 555 78899999999999999999976 78999999999
Q ss_pred HHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCC-ceEEEEEEeccCCccc--CCCccEEEEeecceeecCCCCC-CC
Q 036241 161 IALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAP-EYTFLAYASPVGNYFK--EGSAPLNLYIEEEFVRAAPGGA-GG 236 (367)
Q Consensus 161 lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~-~~~~~I~~~P~~~~~~--~g~~~v~l~v~~~~~R~~p~g~-g~ 236 (367)
+++.+.. ...|||++++.+.+..|+.+.+ .+.++|...|.++++. .+.+++++.+.+ +.|..|..+ +.
T Consensus 84 ~i~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~ 155 (292)
T PRK07544 84 TLAANGL-------TDAYVRPVAWRGSEMMGVSAQQNKIHLAIAAWEWPSYFDPEAKMKGIRLDIAK-WRRPDPETAPSA 155 (292)
T ss_pred HHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEeccccccCccccCCCEEEEEeE-EEcCCCCCcCHh
Confidence 9998863 3568998776554455665443 3456666666554442 234678887654 677766554 56
Q ss_pred cccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCc
Q 036241 237 VKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQ 316 (367)
Q Consensus 237 ~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~ 316 (367)
+|+.+||+.+++++++|+++|+||+|++|. +|+|+|++++|+|+++|++|+||+++ ++|+||||+.|+++|+++|++
T Consensus 156 ~k~~~~yl~~vla~~~A~~~G~deal~ld~--~g~V~E~~~sNlf~v~~~~l~TP~~~-~~L~GItR~~vl~~a~~~g~~ 232 (292)
T PRK07544 156 AKAAGLYMICTISKHAAEAKGYADALMLDY--RGYVAEATGANIFFVKDGVIHTPTPD-CFLDGITRQTVIELAKRRGIE 232 (292)
T ss_pred hhhhcccHHHHHHHHHHHHcCCCeEEEECC--CCCEEEcCceEEEEEECCEEECCCCc-ccccchhHHHHHHHHHHcCCe
Confidence 798889999999999999999999999996 79999999999999999999999986 599999999999999999999
Q ss_pred EEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 317 VEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 317 V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
|+|++++++||.+|||+|+|||+++|+||.+| +++.+ + +||+++
T Consensus 233 v~e~~i~~~eL~~adevfltnS~~gi~PV~~i--~~~~~--~--~g~~~~ 276 (292)
T PRK07544 233 VVERHIMPEELAGFSECFLTGTAAEVTPVSEI--GEYRF--T--PGAITR 276 (292)
T ss_pred EEEEecCHHHHhhcCceeecCccceEEEEEEE--eeEEe--C--CChHHH
Confidence 99999999999999999999999999999998 67666 2 577764
No 14
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=1.1e-52 Score=404.55 Aligned_cols=264 Identities=31% Similarity=0.470 Sum_probs=224.9
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
.+|.||+++|..++.+++.|++|+|||||||||+++ +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~ 78 (288)
T PRK08320 4 LIYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAY---NGR--VFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLET 78 (288)
T ss_pred EEEECCEEEEHHHCcccccchhhhhcceEEEEEEEE---CCE--eecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 479999999999999999999999999999999998 565 78899999999999999999766 789999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccC-CCccEEEEeecceeecCCCCC-CCc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKE-GSAPLNLYIEEEFVRAAPGGA-GGV 237 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~-g~~~v~l~v~~~~~R~~p~g~-g~~ 237 (367)
++.+.. ...+||+.++++.+.+|+.+. ..+.+++++.|..++... -.+++++...+ +.|..+..+ .++
T Consensus 79 i~~~~~-------~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~r~~~~~~~~~~ 150 (288)
T PRK08320 79 LRKNNL-------RDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITVS-TRRNRPDALSPQV 150 (288)
T ss_pred HHhcCC-------CCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEEe-eeccCCCCcCccc
Confidence 998752 356888877655555677654 345677777776543320 01334444433 567665554 689
Q ss_pred ccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcE
Q 036241 238 KAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQV 317 (367)
Q Consensus 238 Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V 317 (367)
|+. ||+.++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|
T Consensus 151 K~~-nyl~~v~a~~~A~~~g~de~L~ld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~g~~v 227 (288)
T PRK08320 151 KSL-NYLNNILAKIEANLAGVDEAIMLND--EGYVAEGTGDNIFIVKNGKLITPPTYAGALEGITRNAVIEIAKELGIPV 227 (288)
T ss_pred hhh-hhHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCcEEEEEEECCEEECCCCcCCCCcCHHHHHHHHHHHHcCCeE
Confidence 996 9999999999999999999999996 7999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 318 EERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 318 ~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+++
T Consensus 228 ~e~~l~~~dL~~ade~f~~ns~~gv~pV~~i--~~~~~--~~~~~g~~~~ 273 (288)
T PRK08320 228 REELFTLHDLYTADEVFLTGTAAEVIPVVKV--DGRVI--GDGKPGPITK 273 (288)
T ss_pred EEEECCHHHHHhCCEEEEecChhhEEEEEEE--CCEEC--CCCCcCHHHH
Confidence 9999999999999999999999999999998 77654 666 799875
No 15
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=1.3e-52 Score=403.82 Aligned_cols=261 Identities=28% Similarity=0.425 Sum_probs=218.7
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
..|.||+++|.+.+.+++.|++|+||||||||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.++
T Consensus 8 ~~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~ 82 (286)
T PRK13356 8 WTFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAF---EGV--TPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREG 82 (286)
T ss_pred eEEECCEEcchhhcccccccchhhhcceeEEEEEEe---cCC--CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 479999999999999999999999999999999998 455 67899999999999999999865 799999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEec-CCcccccCCC-ceEEEEEEeccCCcccCCCccEEEEeecceeecCCCC-CCCcc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGS-GPVLGLGPAP-EYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGG-AGGVK 238 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~-~~~lg~~~~~-~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g-~g~~K 238 (367)
++.+.. ....|||++++.+ +...|..+.+ .+.+.+...+.+.... +++++.+. ++.|..+.. .+++|
T Consensus 83 i~~~~~------~~~~~ir~~v~rg~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~gv~l~~~-~~~r~~~~~~~~~~K 152 (286)
T PRK13356 83 LKRFDP------DTALYIRPMYWAEDGFASGVAPDPESTRFALCLEEAPMPEP---TGFSLTLS-PFRRPTLEMAPTDAK 152 (286)
T ss_pred HHHcCC------CCcEEEEEEEEeccCcccCcCCCcCCceEEEEEEccCCCCC---CcEEEEEe-eeecCCCCCCCccce
Confidence 998752 2357899876543 3322443332 2334444444332222 45777765 467766654 36789
Q ss_pred cccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEE
Q 036241 239 AISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVE 318 (367)
Q Consensus 239 t~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~ 318 (367)
+.+||+.++++.++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.+||+||||+.|+++|+++|++|+
T Consensus 153 ~~~nyl~~vla~~ea~~~g~deal~ld~--~G~v~E~~~sNlf~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~gi~v~ 230 (286)
T PRK13356 153 AGCLYPNNARALREARSRGFDNALVLDM--LGNVAETATSNVFMVKDGVVFTPVPNGTFLNGITRQRVIALLREDGVTVV 230 (286)
T ss_pred eccchHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEEcCCCCCCcccCHHHHHHHHHHHHcCCeEE
Confidence 8889999999999999999999999996 79999999999999999999999999999999999999999999999999
Q ss_pred EEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 319 ERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 319 Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
|++++++||.+|||+|+|||+.+|+||.+| +++.+ + +||+++
T Consensus 231 e~~i~~~eL~~adevfltns~~gi~PV~~i--d~~~~--~--~g~~~~ 272 (286)
T PRK13356 231 ETTLTYEDFLEADEVFSTGNYSKVVPVTRF--DDRSL--Q--PGPVTR 272 (286)
T ss_pred EEecCHHHHHhcCceEEecChheEEEEEEE--CCEEe--c--CChHHH
Confidence 999999999999999999999999999998 78776 2 478765
No 16
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=1.4e-52 Score=399.74 Aligned_cols=259 Identities=29% Similarity=0.431 Sum_probs=219.1
Q ss_pred eeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHH
Q 036241 85 FKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIAL 163 (367)
Q Consensus 85 w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv~ 163 (367)
|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.++++
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 75 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVY---NGK--PFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVA 75 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEE---CCE--EecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998 565 78899999999999999999865 78999999999999
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccCC-CccEEEEeecceeecCCCCCCCcccc
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKEG-SAPLNLYIEEEFVRAAPGGAGGVKAI 240 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g-~~~v~l~v~~~~~R~~p~g~g~~Kt~ 240 (367)
.+.. ..+.+|+|+ ++|.++ .|+.+. ..+.+++++.|.++++... .+++++.+.+ +.|. ..+++|+.
T Consensus 76 ~~~~-----~~~~~~~~~-t~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~-~~~~---~~~~~K~~ 144 (270)
T cd01558 76 KNEG-----GEGDVYIQV-TRGVGP-RGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVP-DIRW---LRCDIKSL 144 (270)
T ss_pred HcCC-----CCceEEEEE-EeCCCc-cCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEec-cccc---CCCCchhh
Confidence 8752 346788886 566654 344432 3456777777775322110 1345565543 3332 34589996
Q ss_pred cCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEE
Q 036241 241 SNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEER 320 (367)
Q Consensus 241 ~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er 320 (367)
||+.++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|+|+
T Consensus 145 -ny~~~~~a~~~a~~~g~de~l~ld~--~g~v~E~~~sNif~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~ 221 (270)
T cd01558 145 -NLLNNVLAKQEAKEAGADEAILLDA--DGLVTEGSSSNVFIVKNGVLVTPPLDNGILPGITRATVIELAKELGIPVEER 221 (270)
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEEcC--CCEEEEcCcEEEEEEECCEEECCCCcCCCCCChHHHHHHHHHHHcCCeEEEE
Confidence 8999999999999999999999996 7999999999999999999999999999999999999999999999999999
Q ss_pred EeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 321 VIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 321 ~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+++
T Consensus 222 ~i~~~eL~~ade~fl~ns~~gv~PV~~i--~~~~~--~~~~~~~~~~ 264 (270)
T cd01558 222 PFSLEELYTADEVFLTSTTAEVMPVVEI--DGRPI--GDGKPGPVTK 264 (270)
T ss_pred eCCHHHHhhCCEEEEecCcccEEEEEEE--CCeEC--CCCCCCHHHH
Confidence 9999999999999999999999999998 67654 666 799875
No 17
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=2.3e-51 Score=394.60 Aligned_cols=260 Identities=24% Similarity=0.333 Sum_probs=222.2
Q ss_pred eeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIA 162 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv 162 (367)
+|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||+.|+|+.+ +.+.+.+.+.+++
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~ 76 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIY---NGH--PFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLL 76 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999999999999999999998 566 67899999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcc-cCCCccEEEEeecceeecCCCCCCCccc
Q 036241 163 LANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYF-KEGSAPLNLYIEEEFVRAAPGGAGGVKA 239 (367)
Q Consensus 163 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~-~~g~~~v~l~v~~~~~R~~p~g~g~~Kt 239 (367)
+.+.. ...|||+++..+.+.+++.+. ..+.++++..|.++.. ......+.+ .+.|..|..+.++|+
T Consensus 77 ~~~~~-------~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Kt 145 (283)
T PRK07650 77 EKNGL-------ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVL----KQRRNTPEGAFRLKS 145 (283)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEE----EEEecCCCCCcchhH
Confidence 88652 357889877654344566543 3567888888875322 111222322 245666777889999
Q ss_pred ccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEE
Q 036241 240 ISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEE 319 (367)
Q Consensus 240 ~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~E 319 (367)
. ||..++++.++|+++|+||+|++|. +|+|+|++++|||++++|+|+||+++.++|+||||+.|+++|++.|++|+|
T Consensus 146 ~-~y~~~v~a~~~a~~~g~de~llln~--~G~v~E~s~sNif~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~g~~v~e 222 (283)
T PRK07650 146 H-HYLNNILGKREIGNDPNKEGIFLTE--EGYVAEGIVSNLFWVKGDIVYTPSLETGILNGITRAFVIKVLEELGIEVKE 222 (283)
T ss_pred H-hHHHHHHHHHHHHHcCCCeEEEECC--CCeEEEcCceEEEEEECCEEEcCCCcCCCcccHHHHHHHHHHHHcCCeEEE
Confidence 6 9999999999999999999999996 799999999999999999999999999999999999999999999999999
Q ss_pred EEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 320 RVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 320 r~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
+.++++||.+|||+|+|||+++|+||.+| +++.+ +..+||+++
T Consensus 223 ~~i~~~dL~~adeifl~ns~~gv~pV~~i--~~~~~--~g~~g~~~~ 265 (283)
T PRK07650 223 GFYTKEELLSADEVFVTNSIQEIVPLTRI--EERDF--PGKVGMVTK 265 (283)
T ss_pred EecCHHHHhhCCEeeeecCcccEEEEEEE--CCEEe--CCCCCHHHH
Confidence 99999999999999999999999999988 78766 322899875
No 18
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=4.1e-51 Score=393.57 Aligned_cols=260 Identities=22% Similarity=0.343 Sum_probs=217.7
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
.+|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.++
T Consensus 4 ~~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~ 78 (286)
T PRK06680 4 IAYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVR---DGK--LVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLREL 78 (286)
T ss_pred EEEECCEEEEHHHCcccccccccceeeEEEEEEEEE---CCE--EechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH
Confidence 579999999999999999999999999999999998 666 67889999999999999999966 789999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCccccc-C--CCceEEEEEEeccCCcccC--CCccEEEEeecceeecCCCCCCC
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLG-P--APEYTFLAYASPVGNYFKE--GSAPLNLYIEEEFVRAAPGGAGG 236 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~-~--~~~~~~~I~~~P~~~~~~~--g~~~v~l~v~~~~~R~~p~g~g~ 236 (367)
++.++. ..+.+|+++ .+|.++ .|.. + ..++.++|++.|.++|... -.+++++.+.+. .| ....+
T Consensus 79 ~~~~~~-----~~~~lr~~v-trG~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~-~~---~~~~~ 147 (286)
T PRK06680 79 IRRNRV-----REGLVYLQV-TRGVAR-RDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPD-NR---WKRCD 147 (286)
T ss_pred HHHcCC-----CceEEEEEE-EeCCCC-CCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecC-CC---CCCCC
Confidence 998763 234556653 455543 2333 2 2457788888887642111 013455554332 12 23467
Q ss_pred cccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEE-ECCEEEccCCCCCCccchHHHHHHHHHHHCCC
Q 036241 237 VKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV-KGNVISTPATNGTILEGITRRSVIEIARDYGY 315 (367)
Q Consensus 237 ~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v-~~~~l~TP~l~~~ILpGITR~sil~la~~~G~ 315 (367)
+|+. ||+.++++.++|+++|+||+|++| +|+|+|++++|+|++ ++++|+|||++.+||+||||++|+++|+++|+
T Consensus 148 ~Ks~-nyl~~vla~~eA~~~g~dd~l~ld---~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~g~ 223 (286)
T PRK06680 148 IKSV-GLLPNVLAKQAAKEAGAQEAWMVD---DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKELGL 223 (286)
T ss_pred cchh-ccHHHHHHHHHHHHCCCCEEEEec---CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHcCC
Confidence 9997 899999999999999999999998 489999999999999 99999999999999999999999999999999
Q ss_pred cEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 316 QVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 316 ~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+++
T Consensus 224 ~v~e~~i~~~el~~ade~f~~ns~~gi~pV~~i--d~~~~--~~~~~g~~~~ 271 (286)
T PRK06680 224 EVEERPFTLQEAYAAREAFITAASSFVFPVVQI--DGKQI--GNGKPGPIAK 271 (286)
T ss_pred eEEEEcCCHHHHhcCcEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHH
Confidence 999999999999999999999999999999998 77755 666 799875
No 19
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=4.3e-51 Score=391.46 Aligned_cols=256 Identities=25% Similarity=0.388 Sum_probs=211.5
Q ss_pred eeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIA 162 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv 162 (367)
.|.||+++|.+++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~---~g~--~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~ 76 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVY---NGK--LFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELV 76 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999 555 78999999999999999999865 7999999999999
Q ss_pred HHcCCCCCCCCCceEEEEEEEEecCCccccc-CC--CceEEEEEEeccCCc---ccCCCccEEEEeecceeecCCCCCCC
Q 036241 163 LANKRWVPPPGKGTLYIRPLLIGSGPVLGLG-PA--PEYTFLAYASPVGNY---FKEGSAPLNLYIEEEFVRAAPGGAGG 236 (367)
Q Consensus 163 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~-~~--~~~~~~I~~~P~~~~---~~~g~~~v~l~v~~~~~R~~p~g~g~ 236 (367)
+.+.. ..+.+|+.+ .+|.++ .+.. |. ..+.++++..|.+.. +.. ++++..... .| ....+
T Consensus 77 ~~~~~-----~~~~irl~~-~rg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---gv~~~~~~~-~~---~~~~~ 142 (276)
T TIGR01121 77 EKNNL-----NTGHVYFQV-TRGVAP-RNHQFPAGTVKPVITAYTKEVPRPEENLEK---GVKAITVED-IR---WLRCD 142 (276)
T ss_pred HhcCC-----CceEEEEEE-EcCCCC-cCCCCCCCCCCcEEEEEEecccCChhHHhc---CeEEEEecC-CC---ccCCC
Confidence 98763 234555553 345432 2322 22 234566666665421 233 344433322 12 12368
Q ss_pred cccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCc
Q 036241 237 VKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQ 316 (367)
Q Consensus 237 ~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~ 316 (367)
+|+. ||+.++++.++|+++|+||+|+++ +|+|+|++++|||++++++|+|||++.++|+||||+.|+++|+++|++
T Consensus 143 ~K~~-nyl~~vla~~eA~~~g~de~l~~~---~g~v~E~~~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~g~~ 218 (276)
T TIGR01121 143 IKSL-NLLGNVLAKQEAHEKGAYEAILHR---GGTVTEGSSSNVYGIKDGVLYTHPANNLILNGITRMVILACAEENGIP 218 (276)
T ss_pred cchh-hhHHHHHHHHHHHHcCCCEEEEec---CCeEEecCceeEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHCCCe
Confidence 9986 999999999999999999999995 589999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 317 VEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 317 V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
|+|+.|+++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|+
T Consensus 219 v~e~~i~~~el~~ade~fltns~~gi~PV~~i--d~~~~--~~~~~g~~~~ 265 (276)
T TIGR01121 219 VKEEPFTKEELLNADEVFVSSTTAEITPVIEI--DGQQI--GDGKPGPWTR 265 (276)
T ss_pred EEEEeCCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHH
Confidence 99999999999999999999999999999998 67654 776 799875
No 20
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=7.3e-51 Score=399.99 Aligned_cols=261 Identities=23% Similarity=0.316 Sum_probs=218.1
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
.+|.||+++|.+++.|++.|++|+||||+||||+++ +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.++
T Consensus 42 ~~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~---~G~--~~~le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~ 116 (336)
T PLN02845 42 SSVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIR---DGH--LYELDAHLDRFLRSAAKAKIPLPFDRATLRRILLQT 116 (336)
T ss_pred eEEECCEEccHHHCcccccccceeecceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHH
Confidence 469999999999999999999999999999999998 566 78899999999999999999876 889999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEE-ecCCcccccC--CCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLI-GSGPVLGLGP--APEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVK 238 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~-g~~~~lg~~~--~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~K 238 (367)
++.+.. ...+||+.+. |.+ ..++.+ ...+.++++..|.+.+.. ..+++++.+.+ +.|. +..+.++|
T Consensus 117 i~~~~~-------~~~~irl~vtrG~g-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~gv~l~~~~-~~~~-~~~~~~~K 185 (336)
T PLN02845 117 VAASGC-------RNGSLRYWLSAGPG-GFSLSPSGCSEPAFYAVVIEDTYAQD-RPEGVKVVTSS-VPIK-PPQFATVK 185 (336)
T ss_pred HHhcCC-------CcEEEEEEEEeCCC-CCCCCCCCCCCCEEEEEEcccccccc-ccCCeEEEEee-eeec-CCccccch
Confidence 998752 2446666544 443 344433 245678888777543221 12456666554 4453 33467899
Q ss_pred cccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEE-CCEEEccCCCCCCccchHHHHHHHHHHHC---C
Q 036241 239 AISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVK-GNVISTPATNGTILEGITRRSVIEIARDY---G 314 (367)
Q Consensus 239 t~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~l~TP~l~~~ILpGITR~sil~la~~~---G 314 (367)
+. ||+.++++.++|+++|+||+||+|. +|+|+|++++||||++ +++|+||++++ ||+||||+.||++|+++ |
T Consensus 186 t~-nyl~~vla~~eA~~~G~deaLlln~--~G~V~Egt~sNiF~v~~~~~l~TP~l~~-iL~GItR~~vlela~~~~~~G 261 (336)
T PLN02845 186 SV-NYLPNALSQMEAEERGAFAGIWLDE--EGFVAEGPNMNVAFLTNDGELVLPPFDK-ILSGCTARRVLELAPRLVSPG 261 (336)
T ss_pred hh-hhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCcceEEEEEECCEEEeCCCCC-cCccHHHHHHHHHHHhhhccC
Confidence 86 9999999999999999999999996 7999999999999885 99999999974 99999999999999986 8
Q ss_pred --CcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 315 --YQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 315 --~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
++|+|+.++++||.+|||+|+|||+++|+||.+| +|+.+ ++| +||+|++
T Consensus 262 ~~i~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~i--d~~~~--~~g~~gp~t~~ 313 (336)
T PLN02845 262 DLRGVKQRKISVEEAKAADEMMLIGSGVPVLPIVSW--DGQPI--GDGKVGPITLA 313 (336)
T ss_pred CceEEEEEecCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHH
Confidence 8999999999999999999999999999999988 78755 777 8998863
No 21
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=1e-50 Score=391.57 Aligned_cols=260 Identities=20% Similarity=0.273 Sum_probs=209.4
Q ss_pred ceeeCCeeeeCCC--cccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHH
Q 036241 83 ENFKQGQLSRYAN--IELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVK 159 (367)
Q Consensus 83 ~~w~ng~i~p~~~--~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~ 159 (367)
.+|.||+++|.++ +.|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.| +.+++.+.+.
T Consensus 6 ~~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~ 80 (290)
T PRK12400 6 FVLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLY---KGN--FHLLDPHITRLYRSMEEIELTLPFSKAELITLLY 80 (290)
T ss_pred EEEECCEEechHHcCceeccccchhhhcceEEEEEEEE---CCE--ecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 5899999999994 55999999999999999999998 566 67789999999999999999976 7889999999
Q ss_pred HHHHHcCCCCCCCCCceEEEEEEE-EecCCcccccCC--CceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCC
Q 036241 160 QIALANKRWVPPPGKGTLYIRPLL-IGSGPVLGLGPA--PEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGG 236 (367)
Q Consensus 160 ~lv~~~~~~vP~~~~~~lyIRp~~-~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~ 236 (367)
++++.++. ....+||+.+ +|.+. .+..++ ..++++++..|.......-.+++++...+ ..|....+
T Consensus 81 ~~~~~~~~------~~~~~iri~v~rG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~~ 149 (290)
T PRK12400 81 KLIENNNF------HEDGTIYLQVSRGVQA-RTHTFSYDVPPTIYAYITKKERPALWIEYGVRAISEP----DTRWLRCD 149 (290)
T ss_pred HHHHhcCC------CCCEEEEEEEEeCCCC-CCCCCCCCCCcEEEEEEecccCchhHHhcCcEEEECC----CCCccCCC
Confidence 99998752 1123455433 44432 343332 34556666654321110001334443322 11223457
Q ss_pred cccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCc
Q 036241 237 VKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQ 316 (367)
Q Consensus 237 ~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~ 316 (367)
+|+. ||+.+++++++|+++|+||+|++| +|+|+|++++|||++++++|+|||++.++|+||||+.||++|+++|++
T Consensus 150 ~Kt~-nyl~~vla~~ea~~~g~deaL~l~---~g~v~E~t~sNif~v~~~~l~TPpl~~g~L~GItR~~llela~~~gi~ 225 (290)
T PRK12400 150 IKSL-NLLPNILAATKAERKGCKEALFVR---NGTVTEGSHSNFFLIKNGTLYTHPANHLILNGIIRQYVLSLAKTLRIP 225 (290)
T ss_pred Cccc-ccHHHHHHHHHHHHcCCCEEEEEc---CCEEEEcCceEEEEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHcCCc
Confidence 8996 899999999999999999999996 599999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 317 VEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 317 V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
|+|+.++++||.+|||+|+|||+++|+||++| +++.+ +++ +||+|+
T Consensus 226 v~E~~i~~~eL~~Adevfltns~~gv~PV~~i--~~~~~--~~~~~g~~t~ 272 (290)
T PRK12400 226 VQEELFSVRDVYQADECFFTGTTIEILPMTHL--DGTAI--QDGQVGPITK 272 (290)
T ss_pred EEEEeCCHHHHHhCCeeeEccCcceEEEEEEE--CCEEC--CCCCcCHHHH
Confidence 99999999999999999999999999999998 77654 777 899886
No 22
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=2.3e-50 Score=389.60 Aligned_cols=260 Identities=21% Similarity=0.262 Sum_probs=216.3
Q ss_pred ceeeCC-----eeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHH
Q 036241 83 ENFKQG-----QLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDA 157 (367)
Q Consensus 83 ~~w~ng-----~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~ 157 (367)
.+|.|| +++|.+++.|++.|++++||||+||||+++ +|+ +|.+++|++||.+||++|+|+.++.++|.++
T Consensus 8 ~~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~---~g~--i~~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~ 82 (292)
T PRK07849 8 VVTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVR---DGR--PCNLEAHLERLARSAALLDLPEPDLDRWRRA 82 (292)
T ss_pred EEEECCCCccceEechHHCCccchhcchhccceEEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCCCHHHHHHH
Confidence 579999 999999999999999999999999999998 566 6678999999999999999999888999999
Q ss_pred HHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCccc-CCCccEEEEeecc-----eeecCC
Q 036241 158 VKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFK-EGSAPLNLYIEEE-----FVRAAP 231 (367)
Q Consensus 158 i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~-~g~~~v~l~v~~~-----~~R~~p 231 (367)
+.++++.+.. . ....+||+++....... ..+.+++.+.|+++... ...+++++.+.+. +.+..|
T Consensus 83 i~~~v~~~~~---~--~~~~~iRl~v~~g~~~~-----~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p 152 (292)
T PRK07849 83 VELAIEEWRA---P--EDEAALRLVYSRGRESG-----GAPTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAP 152 (292)
T ss_pred HHHHHHHhcC---C--CCCeEEEEEEeCCCCCC-----CCCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCc
Confidence 9999987631 0 13457786543221111 24567788888754321 1124566655431 123356
Q ss_pred CCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHH
Q 036241 232 GGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIAR 311 (367)
Q Consensus 232 ~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~ 311 (367)
..+.++|+. ||..++++.++|+++|+||+|++|. +|+|+|++++|||+++|++|+||+++.+||+||||+.|+++|+
T Consensus 153 ~~~~~~Kt~-ny~~~i~a~~~A~~~g~dd~L~ld~--~G~v~E~s~~Nif~~~~g~l~TP~~~~giL~GItR~~vie~~~ 229 (292)
T PRK07849 153 WLLAGAKTL-SYAVNMAALRYAARRGADDVIFTST--DGYVLEGPTSTVVIATDDRLLTPPPWYGILPGTTQAALFEVAR 229 (292)
T ss_pred ccccccchh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHH
Confidence 567889996 9999999999999999999999996 7999999999999999999999999999999999999999999
Q ss_pred HCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 312 DYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 312 ~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
++|++|+||.++++||.+|||+|+|||+++|+||.+| +++.+ ++ ||+|+
T Consensus 230 ~~g~~v~er~i~~~eL~~Adevfltns~~gi~pV~~i--d~~~~--~~--~~~~~ 278 (292)
T PRK07849 230 EKGWDCEYRALRPADLFAADGVWLVSSVRLAARVHTL--DGRPL--PR--DPLAD 278 (292)
T ss_pred HcCCceEEEECCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--CC--ChHHH
Confidence 9999999999999999999999999999999999988 77765 43 67664
No 23
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=2.4e-50 Score=382.85 Aligned_cols=253 Identities=26% Similarity=0.386 Sum_probs=211.2
Q ss_pred eeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q 036241 85 FKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALA 164 (367)
Q Consensus 85 w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~ 164 (367)
|.||+. ++.+++.|++|+||||+|||||++ +|+ +|++++|++||.+||++|+||.++.+++.+.+.++++.
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~~~~~~~~ 71 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVR---NGK--IELLDLHLERLQDAAARLGIPLPDWDALREEMAQLAAG 71 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEE---CCE--eccHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHh
Confidence 789984 778999999999999999999998 666 67889999999999999999988899999999999986
Q ss_pred cCCCCCCCCCceEEEEEEEE-ecCCcccccC--CCceEEEEEEeccCCcccCC-CccEEEEeecceeecCCCCCCCcccc
Q 036241 165 NKRWVPPPGKGTLYIRPLLI-GSGPVLGLGP--APEYTFLAYASPVGNYFKEG-SAPLNLYIEEEFVRAAPGGAGGVKAI 240 (367)
Q Consensus 165 ~~~~vP~~~~~~lyIRp~~~-g~~~~lg~~~--~~~~~~~I~~~P~~~~~~~g-~~~v~l~v~~~~~R~~p~g~g~~Kt~ 240 (367)
+. ..+||+.+. |.+ ..|+.+ ...+.+++++.|+++++... .+++++.+.+ ..+..+..+.++|+.
T Consensus 72 ~~---------~~~ir~~v~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~Kt~ 140 (261)
T TIGR03461 72 YS---------LGVLKVIISRGSG-GRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSP-VRLGRNPLLAGIKHL 140 (261)
T ss_pred CC---------CeEEEEEEecCCC-CCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEec-cccCCCCCCcCcccc
Confidence 53 235565443 433 234433 24457778888876544321 2456676654 334434456789996
Q ss_pred cCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEE
Q 036241 241 SNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEER 320 (367)
Q Consensus 241 ~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er 320 (367)
||+.++++.++|+++|+||+||+|. +|+|+|++++|||+++|++|+||+++.++|+||||+.|+++|++.|++|+|+
T Consensus 141 -~y~~~~~a~~~A~~~g~de~llln~--~g~v~E~s~sNif~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~g~~v~E~ 217 (261)
T TIGR03461 141 -NRLEQVLIKAELENSEADEALVLDT--DGNVVECTAANIFWRKGNQVFTPDLSYCGVAGVMRQHVLALLPALGYEIEEV 217 (261)
T ss_pred -ccHHHHHHHHHhhhcCCCEEEEECC--CCCEEEeccEEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999996 7999999999999999999999999989999999999999999999999999
Q ss_pred EeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 321 VIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 321 ~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
.|+++||.+|||+|+|||+++|+||.+| +++.+ + .||+|+
T Consensus 218 ~i~~~eL~~ade~f~~ns~~gi~pV~~i--d~~~~--~--~~~~~~ 257 (261)
T TIGR03461 218 KAGLEELLSADEVFITNSLMGVVPVNAI--GETSY--P--SRTLTR 257 (261)
T ss_pred ecCHHHHhhCCEEEEeCCccceEEEEEE--CCEEe--c--chHHHH
Confidence 9999999999999999999999999988 78766 3 367765
No 24
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=1.1e-49 Score=379.76 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=209.0
Q ss_pred eeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIAL 163 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~ 163 (367)
+|.||++ .+.++++|++|+||||+||||+++ +|+ +|++++|++||++||++|+||.++.+.+.+.+.+++.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~l~~~~~ 72 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVR---DGQ--VSLLSRHLQRLQDACERLAIPLDDWAQLEQEMKQLAA 72 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEE---CCe--eccHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 5889986 578999999999999999999997 666 6778999999999999999998877888888888773
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccCC-CccEEEEeecceeecCCCCCCCcccc
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKEG-SAPLNLYIEEEFVRAAPGGAGGVKAI 240 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g-~~~v~l~v~~~~~R~~p~g~g~~Kt~ 240 (367)
.. ...++|+.+.......|+.++ ..+.+++++.|++++..+. .+++++.+.+. .+..+..+.++|+.
T Consensus 73 ~~---------~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~~-~~~~~~~~~~~Kt~ 142 (268)
T PRK06092 73 EL---------ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCPT-RLGRNPLLAGIKHL 142 (268)
T ss_pred hC---------CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEecc-ccCCCCCccCcchh
Confidence 21 123555544432223455443 3457888888886544321 24567776553 33333356789995
Q ss_pred cCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEE
Q 036241 241 SNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEER 320 (367)
Q Consensus 241 ~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er 320 (367)
||+.++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++||||||+.|+++|+++|++|+|+
T Consensus 143 -ny~~~~~a~~~A~~~g~de~l~l~~--~g~v~E~s~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~g~~v~e~ 219 (268)
T PRK06092 143 -NRLEQVLIRAELEQTEADEALVLDS--EGWVIECCAANLFWRKGGVVYTPDLDQCGVAGVMRQFILELLAQSGYPVVEV 219 (268)
T ss_pred -hhHHHHHHHHHHHhcCCCEEEEECC--CCCEEEccceEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999996 7999999999999999999999999888999999999999999999999999
Q ss_pred EeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 321 VIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 321 ~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
.++++||.+|||+|+|||+++|+||.+| +++.+ + .||+++
T Consensus 220 ~i~~~dL~~adevfltns~~gi~pV~~i--d~~~~--~--~g~~~~ 259 (268)
T PRK06092 220 DASLEELLQADEVFICNSLMPVWPVRAI--GETSY--S--SGTLTR 259 (268)
T ss_pred ECCHHHHhhCCEEEEeCCcceEEEEEEE--CCEEc--c--chHHHH
Confidence 9999999999999999999999999988 78766 3 377765
No 25
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=4e-49 Score=372.36 Aligned_cols=247 Identities=42% Similarity=0.640 Sum_probs=209.4
Q ss_pred CccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCC-CCHHHHHHHHHHHHHHcCCCCCCCCCceEEEE
Q 036241 102 AAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPS-PSVDQFVDAVKQIALANKRWVPPPGKGTLYIR 180 (367)
Q Consensus 102 ~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~-~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIR 180 (367)
|++|+||||+||||+++ +|+ +|++++|++||.+||+.|+|+. ++.+++.+.+.++++.+. ....+||
T Consensus 1 drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ir 68 (256)
T cd00449 1 DRGLHYGDGVFEGLRAG---KGR--LFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANN-------GASLYIR 68 (256)
T ss_pred CceeeccceEEEEEEEc---CcE--EEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCC-------CCCEEEE
Confidence 68999999999999997 666 7789999999999999999994 589999999999998754 2467888
Q ss_pred EEEEecCCcccccC--CCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCC
Q 036241 181 PLLIGSGPVLGLGP--APEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGF 258 (367)
Q Consensus 181 p~~~g~~~~lg~~~--~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~ 258 (367)
+.+.+.....|..+ ...+.+++++.|.+++.....+++++.+.+...++.+..+.++|+. ||+.++++.++|+++|+
T Consensus 69 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~a~~~a~~~g~ 147 (256)
T cd00449 69 PLLTRGVGGLGVAPPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTG-GNLNSVLAKQEAAEAGA 147 (256)
T ss_pred EEEEecccccCCCCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhh-CCHHHHHHHHHHHHcCC
Confidence 87765544556643 3567888888887654111235677777654333356678899997 78999999999999999
Q ss_pred ceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEcc
Q 036241 259 SDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGT 338 (367)
Q Consensus 259 de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gT 338 (367)
||+|++|. +|+|+|++++|+|++++++|+||+++.++|+||||+.|+++|+++|++|+|+.++++||.+|||+|+|||
T Consensus 148 de~llld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns 225 (256)
T cd00449 148 DEALLLDD--NGYVTEGSASNVFIVKDGELVTPPLDGGILPGITRDSVIELAKELGIKVEERPISLDELYAADEVFLTGT 225 (256)
T ss_pred CEEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCcCcchhHHHHHHHHHHcCCeEEEEecCHHHHhhCCEEEEccc
Confidence 99999996 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 339 AVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 339 a~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
+++|+||.+| +++.+ +++ +||++++
T Consensus 226 ~~gv~pV~~i--~~~~~--~~~~~~~~~~~ 251 (256)
T cd00449 226 AAEVTPVTEI--DGRGI--GDGKPGPVTRK 251 (256)
T ss_pred cceEEEEEEE--CCeec--CCCCCCHHHHH
Confidence 9999999998 77765 555 7998753
No 26
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=2.3e-49 Score=373.78 Aligned_cols=240 Identities=30% Similarity=0.452 Sum_probs=203.9
Q ss_pred CccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEE
Q 036241 102 AAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRP 181 (367)
Q Consensus 102 ~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp 181 (367)
|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.++.+++.+.+.++++.+.. ...+||+
T Consensus 1 Drg~~~GdgvFEt~~~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~i~~~~~-------~~~~ir~ 68 (249)
T cd01559 1 DRGFAYGDGVFETMRAL---DGR--LFLLDAHLARLERSARRLGIPEPDLPRLRAALESLLAANDI-------DEGRIRL 68 (249)
T ss_pred CCcccccceeEEEEEEE---CCE--EccHHHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHhCCC-------CceEEEE
Confidence 68999999999999998 565 67899999999999999999965899999999999998753 3458887
Q ss_pred EEEecCCcccccC--CCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCc
Q 036241 182 LLIGSGPVLGLGP--APEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFS 259 (367)
Q Consensus 182 ~~~g~~~~lg~~~--~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~d 259 (367)
++.......|+.+ ..++.+++...|.++ ....+++++.+.+ +.|..+..++++|+. ||+.++++.++|+++|+|
T Consensus 69 ~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~-ny~~~~~a~~~a~~~g~d 144 (249)
T cd01559 69 ILSRGPGGRGYAPSVCPGPALYVSVIPLPP--AWRQDGVRLITCP-VRLGEQPLLAGLKHL-NYLENVLAKREARDRGAD 144 (249)
T ss_pred EEecCCCCCCCCCCCCCCCEEEEEeccCCH--HHHhCCcEEEEcc-cccCCCCCCCCcchh-hhHHHHHHHHHHHhcCCC
Confidence 6653332344443 345678888888653 1112456676654 667677788999995 999999999999999999
Q ss_pred eEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccc
Q 036241 260 DVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTA 339 (367)
Q Consensus 260 e~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa 339 (367)
|+||+|. +|+|+|++++|||++++++|+||+++.+|||||||+.|+++++++|++|+|+.|+++||.+|||+|+|||+
T Consensus 145 e~l~l~~--~g~v~E~~~~Nif~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~g~~v~e~~i~~~el~~ade~~~~ns~ 222 (249)
T cd01559 145 EALFLDT--DGRVIEGTASNLFFVKDGELVTPSLDRGGLAGITRQRVIELAAAKGYAVDERPLRLEDLLAADEAFLTNSL 222 (249)
T ss_pred EEEEEcC--CCCEEEecceEEEEEECCEEECCCcccCccccHHHHHHHHHHHHcCceEEEEecCHHHHhhCCEEEEecCc
Confidence 9999996 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 340 VVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 340 ~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
++|+||.+| ++. ++ +||+++
T Consensus 223 ~gi~pV~~i--d~~-----~~~~~~~~~ 243 (249)
T cd01559 223 LGVAPVTAI--DDH-----DGPPGPLTR 243 (249)
T ss_pred cceeEEEEE--CCc-----ccCccHHHH
Confidence 999999998 552 23 688775
No 27
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=4.6e-48 Score=368.55 Aligned_cols=249 Identities=17% Similarity=0.174 Sum_probs=206.4
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQI 161 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~l 161 (367)
..+|.||+++|..++. ++++||||+||||+++ +|+ +|++++|++||.+||++|.++.++.+++.+.+.++
T Consensus 3 ~~~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~l~~~l~~~ 72 (266)
T PRK09266 3 PLIELNGRPATAEDLA-----ALALANYGHFTSMQVR---DGR--VRGLDLHLQRLRRASRELFGAALDDDRVRAQLRAA 72 (266)
T ss_pred cEEEECCEECCHHHhh-----hHhhccceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 4579999999999876 4899999999999998 666 67799999999999999977666899999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCcccccCC-CceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA-PEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAI 240 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~-~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~ 240 (367)
++. . ....|||+++.+..+..|..+. ..+.+++.+.|..++.. +++++.+.+ +.|.. .++|+.
T Consensus 73 ~~~-~-------~~~~~ir~~v~r~~g~~~~~~~~~~~~~~i~~~~~~~~~~---~~v~l~~~~-~~r~~----~~~K~~ 136 (266)
T PRK09266 73 LAA-G-------PADASVRVTVFAPDFDFRNPLADVAPDVLVATSPPADGPA---GPLRLQSVP-YEREL----PHIKHV 136 (266)
T ss_pred Hhc-C-------CCcEEEEEEEEecCcccCCCCCCCCceEEEEEecCCcCCC---CCeEEEEEE-ecccC----CCCCCC
Confidence 843 2 1357899876643334554332 35677787777654433 455565543 45543 479997
Q ss_pred cCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEE
Q 036241 241 SNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEER 320 (367)
Q Consensus 241 ~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er 320 (367)
||..+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+. ++||||||+.|+++++++|++|+|+
T Consensus 137 -~~l~~vla~~~a~~~g~de~l~ln~--~g~v~E~~~sNlf~v~~~~l~TP~~--~~L~GItR~~ll~~~~~~g~~v~e~ 211 (266)
T PRK09266 137 -GTFGQLHLRRLAQRAGFDDALFVDP--DGRVSEGATWNLGFWDGGAVVWPQA--PALPGVTMALLQRGLERLGIPQRTR 211 (266)
T ss_pred -CcHHHHHHHHHHHHcCCCeEEEEcC--CCcEEEcCceEEEEEECCEEECCCC--CccchHHHHHHHHHHHHcCCeeEEE
Confidence 7788899999999999999999996 7999999999999999999999994 6999999999999999999999999
Q ss_pred EeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 321 VIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 321 ~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
.++++||.+|||+|+|||+++|+||.+| +++.+ +++ ||+++
T Consensus 212 ~i~~~eL~~adevfltnSl~gi~pV~~i--~~~~~--~~~-~~~~~ 252 (266)
T PRK09266 212 PVTLADLGRFAGAFACNAWRGQRAVSAI--DDVAL--PDS-HALLE 252 (266)
T ss_pred ECCHHHHHHhhHhhhhcCccceEEEEEE--CCEEC--CCC-chHHH
Confidence 9999999999999999999999999998 77765 443 67765
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=1.9e-38 Score=294.49 Aligned_cols=218 Identities=30% Similarity=0.405 Sum_probs=165.6
Q ss_pred eChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEec
Q 036241 128 FRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASP 206 (367)
Q Consensus 128 Fr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P 206 (367)
|++++|++||.+||+++ +..+ +.+.+.+.++++++.+.. .+..|||+++.++++..+..+............
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~------~~~~~ir~~v~~g~~~~~~~~~~~~~~~~~~~~ 73 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPD------QGEGYIRITVTRGGGPLGGSPPENSAPPPFSIA 73 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTS------SSSEEEEEEEEETSSSSSSSECSEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCCcCccCcccccccccccc
Confidence 67999999999999999 4433 789999999999998761 244599998877665565555443322211111
Q ss_pred cCCcccCCCccEEEEeecceeecCCC-----CCCCcccccCchHHHH-HHHHHHhCCCceEEEEeccCCCeEEecCceeE
Q 036241 207 VGNYFKEGSAPLNLYIEEEFVRAAPG-----GAGGVKAISNYAPVLK-ALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNI 280 (367)
Q Consensus 207 ~~~~~~~g~~~v~l~v~~~~~R~~p~-----g~g~~Kt~~nY~~~~~-a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNi 280 (367)
..... +..........+..+. .++++|+. ||..+.+ +.++|+++|+||+|++|. +|+|+|++++||
T Consensus 74 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~~~~~~a~~~g~de~ll~d~--~G~v~E~~~sNi 145 (231)
T PF01063_consen 74 PPRRP-----PPPLVGSVGVRRASPPLPRPNPLPRHKTT-NRLANVLAALRAAREKGADEALLLDE--DGNVTEGSTSNI 145 (231)
T ss_dssp TCHHH-----HEEEEEECSEECETTTSE-TTTSTTS-BS-HHHHHHHHHHHHHHHTTSSEEEEEET--TSBEEEESSSEE
T ss_pred ccccC-----CcceeeeeeEEeccccccccCCCCCeeEC-CcchhhHHHHHHHHhcCcchhheecC--CCCcCCCCCccc
Confidence 11100 1111111222233222 37899997 5666666 777777999999999997 799999999999
Q ss_pred EEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC
Q 036241 281 FVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG 360 (367)
Q Consensus 281 F~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~ 360 (367)
|+++|++|+||+++.|||+||||+.|+++++++|++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +
T Consensus 146 f~~~~~~~~TP~~~~giL~Gitr~~ll~~~~~~g~~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i--~~~~~--~-- 219 (231)
T PF01063_consen 146 FFVKDGTLYTPPLDSGILPGITRQLLLELAKELGIPVEERPITLDDLQQADEVFLTNSLRGIRPVKSI--DGRSF--G-- 219 (231)
T ss_dssp EEEETTEEEEESGSSSSB--HHHHHHHHHHHHTTSEEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEE--TTEES--T--
T ss_pred ccccCCEEEcCChhhhhccHHHHHHHHHHHHhCCCCcEEEEeCHHHhhhhhheEEecchhhEEEEEEE--CCEEC--C--
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 88876 3
Q ss_pred cccccc
Q 036241 361 SRSVYQ 366 (367)
Q Consensus 361 ~G~vt~ 366 (367)
.||+|+
T Consensus 220 ~~p~~~ 225 (231)
T PF01063_consen 220 PGPITR 225 (231)
T ss_dssp THHHHH
T ss_pred CCHHHH
Confidence 788875
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=280.78 Aligned_cols=205 Identities=17% Similarity=0.185 Sum_probs=165.9
Q ss_pred CeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCC
Q 036241 109 QGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGP 188 (367)
Q Consensus 109 ~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~ 188 (367)
.++||||+++ ++|+ ++++++|++||.+||++|++|.+ .+.+.+.+.++++.+. +..++|.++. .++
T Consensus 4 ~~lfETi~~~--~~G~--~~~l~~Hl~RL~~sa~~l~~~~~-~~~l~~~l~~~~~~~~--------~~~~vrl~~~-~~g 69 (209)
T PRK07546 4 FELIETLRWE--PGAG--FPRLDRHLARLERSARALGFPCD-PAAVRAKLAEAVAGAQ--------GPLRLRLTLA-RDG 69 (209)
T ss_pred ccEEEEEEEe--CCCC--cccHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhhccC--------CCeEEEEEEc-CCC
Confidence 3699999986 2455 67789999999999999999975 6788889998887532 3467775443 221
Q ss_pred cccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccC
Q 036241 189 VLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVN 268 (367)
Q Consensus 189 ~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~ 268 (367)
.+++...|+++.... .+.++.+.+ ..+..+..+..+|+. ||+.+++++++|+++|+||+|++|.
T Consensus 70 ----------~~~i~~~p~~~~~~~--~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~v~a~~~a~~~g~de~l~l~~-- 133 (209)
T PRK07546 70 ----------RLTVETAPLPPLPPD--TVWRVAIAR-TRLDSADPLLRYKTT-RRAAYDAARAELPPAEADEVILLNE-- 133 (209)
T ss_pred ----------CEEEEEecCCCCCCC--CcEEEEEcC-cccCCCCcchhcccC-ChHHHHHHHHHHhhCCCCEEEEECC--
Confidence 245667776542221 234444433 334444456689996 9999999999999999999999996
Q ss_pred CCeEEecCceeEEEEECCEEE-ccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEE
Q 036241 269 RKNVEEVSSCNIFVVKGNVIS-TPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGS 347 (367)
Q Consensus 269 ~g~V~E~s~sNiF~v~~~~l~-TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~ 347 (367)
+|+|+|++++|||++++++|+ ||+++.++|+||||+.+++. .+|+|+.++++||.+|||+|+|||++||+||..
T Consensus 134 ~G~v~E~s~~Ni~~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-----~~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~ 208 (209)
T PRK07546 134 RGEVCEGTITNVFLDRGGGMLTTPPLSCGLLPGVLRAELLDA-----GRAREAVLTVDDLKSARAIWVGNSLRGLIRAEL 208 (209)
T ss_pred CCcEEEcCceeEEEEECCEEEECCCCcCCCCccHHHHHHHhh-----CCeEEEEcCHHHHhhCCEEEEEccceeEEEEEE
Confidence 799999999999999999999 99999999999999999985 589999999999999999999999999999986
Q ss_pred E
Q 036241 348 I 348 (367)
Q Consensus 348 I 348 (367)
|
T Consensus 209 ~ 209 (209)
T PRK07546 209 I 209 (209)
T ss_pred C
Confidence 4
No 30
>PRK07101 hypothetical protein; Provisional
Probab=99.96 E-value=1.5e-28 Score=223.18 Aligned_cols=182 Identities=13% Similarity=0.181 Sum_probs=136.2
Q ss_pred eEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCC-C-CHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecC
Q 036241 110 GVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPS-P-SVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSG 187 (367)
Q Consensus 110 ~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~-~-~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~ 187 (367)
++||||+++ +|+ ++++++|++||.+||+.+++.. + +.+++.+.+.++ . .+..|+|.+. +.+
T Consensus 4 ~l~ETir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~r~rl~~-~~g 66 (187)
T PRK07101 4 PLFETIAIE---DGE--IQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL----Q-------EGLVRCRIDY-NAE 66 (187)
T ss_pred cceEEEeee---CCe--eccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh----c-------CCCEEEEEEe-cCC
Confidence 699999997 666 6789999999999999998854 3 677777766543 1 2457888654 544
Q ss_pred CcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEecc
Q 036241 188 PVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSV 267 (367)
Q Consensus 188 ~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~ 267 (367)
. + -+...|..+.. .+++++...++ ..-.+|+. |+. .+....|++.|+||+|++|
T Consensus 67 ~-~----------~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~Kt~-~r~--~~~~~~a~~~g~de~l~~~-- 120 (187)
T PRK07101 67 I-Y----------QVQYFPYQRRP---IRSFQPVYCDD-------IDYSLKYT-DRS--ALNELFAQKGECDEIIIIK-- 120 (187)
T ss_pred c-E----------EEEEEcCCCCC---cCceEEEecCC-------cccccccC-CHH--HHHHHHHHhCCCCEEEEEc--
Confidence 2 2 22233332211 12344432222 12378997 432 3344456678999999997
Q ss_pred CCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccce
Q 036241 268 NRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVV 342 (367)
Q Consensus 268 ~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I 342 (367)
+|+|+|++++|||++++++|+||| .++|+||||+.+++. | +|+|+.|+++||.+|||+|+|||++|+
T Consensus 121 -~G~v~E~~~sNi~~~~~~~~~TP~--~~~L~Gi~R~~ll~~----~-~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 121 -NGLVTDTSIGNLAFFDGKQWFTPK--KPLLKGTQRARLLDE----G-KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred -CCEEEEccceEEEEEECCEEEcCC--CCCccHHHHHHHHcc----C-CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 599999999999999999999999 489999999999984 5 899999999999999999999999874
No 31
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.98 E-value=80 Score=26.96 Aligned_cols=40 Identities=10% Similarity=0.333 Sum_probs=33.6
Q ss_pred HHHHHhhcCCCCC-CHHHHHHHHHHHHHHcCCCCCCCCCceEEEE
Q 036241 137 MKIGAERMCMPSP-SVDQFVDAVKQIALANKRWVPPPGKGTLYIR 180 (367)
Q Consensus 137 L~~Sa~~l~~p~~-~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIR 180 (367)
|..+++.|++..+ +.+++.+--..|.+.|.. ..+|+.||.
T Consensus 58 lqEa~qILnV~~~ln~eei~k~yehLFevNdk----skGGSFYLQ 98 (132)
T KOG3442|consen 58 LQEAQQILNVKEPLNREEIEKRYEHLFEVNDK----SKGGSFYLQ 98 (132)
T ss_pred HHHHhhHhCCCCCCCHHHHHHHHHHHHhccCc----ccCcceeeh
Confidence 6778999999876 899999999999999874 245899997
No 32
>PF15507 DUF4649: Domain of unknown function (DUF4649)
Probab=33.40 E-value=42 Score=25.89 Aligned_cols=41 Identities=20% Similarity=0.250 Sum_probs=30.5
Q ss_pred EEEEeCHHHHhhcce-eEEE-ccccceEEeEEEEECCEEEEeC
Q 036241 318 EERVIPVDELINADQ-VFCT-GTAVVVAPVGSITYQNKRVEFK 358 (367)
Q Consensus 318 ~Er~i~~~eL~~adE-vf~~-gTa~~I~PV~~I~~~g~~~~~~ 358 (367)
.||.++.++..++.- --+| -|..-=.||.++.++|+.+.+.
T Consensus 11 ~Er~~~fe~~~ef~~s~~~C~vtipD~~~V~svt~~G~~ldy~ 53 (72)
T PF15507_consen 11 QERTQTFEDYNEFMRSQSGCIVTIPDYYPVTSVTYNGQDLDYQ 53 (72)
T ss_pred eEEEEEeCCHHHHHHHhccCcccCCCceEEEEEEECCEEeccc
Confidence 578887777666532 2345 6778889999999999998663
No 33
>TIGR00829 FRU PTS system, fructose-specific, IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several PTS components of unknown specificities. The fructose components of this family phosphorylate fructose on the 1-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This family is specific for the IIB domain of the fructose PTS transporters.
Probab=26.10 E-value=1.1e+02 Score=24.13 Aligned_cols=45 Identities=18% Similarity=0.369 Sum_probs=32.3
Q ss_pred HHHHHHCCCcEE---------EEEeCHHHHhhcceeEEEccccceEEeEEEE-ECCEEE
Q 036241 307 IEIARDYGYQVE---------ERVIPVDELINADQVFCTGTAVVVAPVGSIT-YQNKRV 355 (367)
Q Consensus 307 l~la~~~G~~V~---------Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~-~~g~~~ 355 (367)
-+.|+++|+++. +..++.+++.+||-+++.+... +..-. +.|+.+
T Consensus 21 ~~aA~~~G~~i~VE~qg~~g~~~~lt~~~i~~Ad~viia~d~~----~~~~~rf~gk~v 75 (85)
T TIGR00829 21 EKAAKKRGWEVKVETQGSVGAQNALTAEDIAAADGVILAADRE----IDLSRRFAGKNV 75 (85)
T ss_pred HHHHHHCCCeEEEEecCCcCccCCCCHHHHHhCCEEEEeccCC----CchhhhcCCCeE
Confidence 345778898766 5568889999999999988763 33333 566654
No 34
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=23.87 E-value=1.5e+02 Score=23.72 Aligned_cols=48 Identities=21% Similarity=0.442 Sum_probs=33.4
Q ss_pred HHHHHHHHHCCCcEE---------EEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEE
Q 036241 304 RSVIEIARDYGYQVE---------ERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRV 355 (367)
Q Consensus 304 ~sil~la~~~G~~V~---------Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~ 355 (367)
+.+-+.+++.|+++. +..++.+++.+||-+++++... +..-++.|+.+
T Consensus 19 ~~L~~aa~~~g~~~~ve~~~~~g~~~~l~~~~i~~Ad~vi~~~~~~----~~~~rf~gk~v 75 (96)
T cd05569 19 EALEKAAKKLGWEIKVETQGSLGIENELTAEDIAEADAVILAADVP----VDDERFAGKRV 75 (96)
T ss_pred HHHHHHHHHCCCeEEEEEecCcCccCcCCHHHHhhCCEEEEecCCC----CchhhhCCCeE
Confidence 344467888998766 5567779999999999988764 22234466654
No 35
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=22.95 E-value=96 Score=28.94 Aligned_cols=29 Identities=24% Similarity=0.454 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHCCCcEEEEEeCHHHHhhc
Q 036241 302 TRRSVIEIARDYGYQVEERVIPVDELINA 330 (367)
Q Consensus 302 TR~sil~la~~~G~~V~Er~i~~~eL~~a 330 (367)
--+.+++.|++.|+.|++|.++++||.+-
T Consensus 91 RV~~lF~~A~~~gi~V~~rsvs~~ei~~h 119 (212)
T PF09778_consen 91 RVNRLFQKAKAAGINVEKRSVSIQEIIEH 119 (212)
T ss_pred HHHHHHHHHHHcCCceEEeeccHHHHHHH
Confidence 34567788999999999999999999763
No 36
>PRK10474 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=22.23 E-value=1.4e+02 Score=23.60 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=29.0
Q ss_pred HHHHHHHHHCCCcEE---------EEEeCHHHHhhcceeEEEcccc
Q 036241 304 RSVIEIARDYGYQVE---------ERVIPVDELINADQVFCTGTAV 340 (367)
Q Consensus 304 ~sil~la~~~G~~V~---------Er~i~~~eL~~adEvf~~gTa~ 340 (367)
+.+-+.|++.|+++. +..++.+++..||-+++.+...
T Consensus 4 eaL~~aA~~~G~~i~VEtqg~~g~~~~lt~~~i~~Ad~VIia~d~~ 49 (88)
T PRK10474 4 EALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIG 49 (88)
T ss_pred HHHHHHHHHCCCeEEEEecCCcCcCCCCCHHHHHhCCEEEEEecCC
Confidence 345567888998765 4468889999999999988763
No 37
>PF13051 DUF3912: Protein of unknown function (DUF3912)
Probab=20.36 E-value=98 Score=22.80 Aligned_cols=38 Identities=16% Similarity=0.204 Sum_probs=30.0
Q ss_pred ceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCC
Q 036241 277 SCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYG 314 (367)
Q Consensus 277 ~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G 314 (367)
-++++++.++..+--.|.+-.|-|+--...-++|++.|
T Consensus 31 ~~~f~ivi~~q~i~velkdivlvgvdvgqfh~wceqng 68 (68)
T PF13051_consen 31 ESHFAIVIGEQSIDVELKDIVLVGVDVGQFHEWCEQNG 68 (68)
T ss_pred CCcEEEEECCeEEEEEeeeEEEEEecHHHHHHHHhhCC
Confidence 46778888888877778788889998888888887654
Done!