Query 036241
Match_columns 367
No_of_seqs 261 out of 1992
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 18:34:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036241.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036241hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dth_A Branched-chain amino ac 100.0 6.5E-82 2.2E-86 625.1 30.2 312 56-367 25-348 (372)
2 3dtg_A Branched-chain amino ac 100.0 1.6E-80 5.6E-85 616.4 32.2 307 61-367 30-348 (372)
3 3uzo_A Branched-chain-amino-ac 100.0 5.7E-78 2E-82 594.9 28.9 313 52-367 17-335 (358)
4 2coi_A Branched chain aminotra 100.0 3.6E-77 1.2E-81 594.8 34.4 318 49-367 32-364 (386)
5 4dqn_A Putative branched-chain 100.0 2.6E-76 8.7E-81 580.9 33.4 309 57-367 7-320 (345)
6 2a1h_A Branched chain aminotra 100.0 9.5E-75 3.3E-79 573.9 35.2 314 52-367 15-344 (365)
7 3u0g_A Putative branched-chain 100.0 1.4E-61 4.9E-66 473.2 27.4 273 80-367 27-305 (328)
8 2eiy_A ILVE, branched-chain am 100.0 1.4E-58 4.7E-63 448.1 31.0 269 82-366 6-281 (308)
9 1iye_A Branched-chain amino ac 100.0 7.8E-59 2.7E-63 449.9 29.0 270 82-366 7-283 (309)
10 3daa_A D-amino acid aminotrans 100.0 1.6E-57 5.4E-62 435.0 28.8 262 83-367 2-267 (277)
11 1i2k_A 4-amino-4-deoxychorisma 100.0 5.9E-55 2E-59 415.0 28.1 255 84-366 2-259 (269)
12 3lul_A 4-amino-4-deoxychorisma 100.0 1.3E-53 4.4E-58 406.9 31.8 246 83-355 5-253 (272)
13 2xpf_A 4-amino-4-deoxychorisma 100.0 5.7E-54 2E-58 413.2 26.7 255 83-366 23-280 (292)
14 3sno_A Hypothetical aminotrans 100.0 1.9E-53 6.4E-58 413.7 24.3 260 84-366 17-304 (315)
15 3csw_A BCAT, putative branched 100.0 3E-51 1E-55 393.0 21.3 245 85-366 18-265 (285)
16 2zgi_A Putative 4-amino-4-deox 100.0 1.1E-47 3.7E-52 360.8 21.4 230 84-354 2-232 (246)
17 3qqm_A MLR3007 protein; struct 100.0 8.3E-43 2.8E-47 322.9 21.5 207 106-347 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 4.6E-39 1.6E-43 291.6 19.9 189 106-342 2-194 (194)
19 2kyr_A Fructose-like phosphotr 20.5 1E+02 0.0036 24.5 4.1 45 295-339 16-70 (111)
No 1
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=6.5e-82 Score=625.11 Aligned_cols=312 Identities=38% Similarity=0.712 Sum_probs=298.0
Q ss_pred cCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHH
Q 036241 56 YADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNAS 135 (367)
Q Consensus 56 ~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~ 135 (367)
..++||++|+||++|||||++++|+++++|.||+++|++++.|+|+|++|||||+||||||+|+++||++++|||++|++
T Consensus 25 ~~~~~~~~l~fg~~~td~m~~~~~~~~~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~ 104 (372)
T 3dth_A 25 VRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAA 104 (372)
T ss_dssp HHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHH
T ss_pred hcccchhccCCCCccCCceEEEEEcCCCeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHH
Confidence 34689999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCC-CCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCC
Q 036241 136 RMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPP-GKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEG 214 (367)
Q Consensus 136 RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~-~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g 214 (367)
||++||++|+||.++.++|.++|+++++.|..|||+. .++++||||+++++++.+|+.|+.+++++|+++|+++||+.|
T Consensus 105 RL~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~p~~~y~~~g 184 (372)
T 3dth_A 105 RLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGG 184 (372)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEEEESCSSSCS
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEeeCchhhccC
Confidence 9999999999997799999999999999999999986 457999999999988889999988899999999999999988
Q ss_pred CccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECC----EEEc
Q 036241 215 SAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGN----VIST 290 (367)
Q Consensus 215 ~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~----~l~T 290 (367)
.+++++.++++|.|++|++++++|+++||+++++|+++|+++||||+||||..++|+|+|+++||||+++++ +|+|
T Consensus 185 ~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~~~g~~l~T 264 (372)
T 3dth_A 185 IKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVT 264 (372)
T ss_dssp SSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEE
T ss_pred CccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEECCCCceEEEE
Confidence 999999998889999999999999988999999999999999999999999866899999999999999998 9999
Q ss_pred cCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhc------ceeEEEccccceEEeEEEEECCEEEEeCCC-ccc
Q 036241 291 PATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRS 363 (367)
Q Consensus 291 P~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~a------dEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~ 363 (367)
||++++|||||||++||++|+++|++|+||+|+++||.+| +|+|+|||+++|+||.+|++.++.+.+++| +||
T Consensus 265 P~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~~i~~g~~Gp 344 (372)
T 3dth_A 265 PELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGE 344 (372)
T ss_dssp CCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceEECCCCCcCH
Confidence 9999999999999999999999999999999999999998 999999999999999999998888889988 899
Q ss_pred cccC
Q 036241 364 VYQE 367 (367)
Q Consensus 364 vt~~ 367 (367)
+|++
T Consensus 345 vt~~ 348 (372)
T 3dth_A 345 ITMA 348 (372)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 2
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.6e-80 Score=616.44 Aligned_cols=307 Identities=39% Similarity=0.721 Sum_probs=294.8
Q ss_pred CCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHH
Q 036241 61 WDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIG 140 (367)
Q Consensus 61 ~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~S 140 (367)
++|+|||++|||||++++|+.+++|.||+|+|+++++|||++++|||||+||||||+|+++||++++|||++|++||.+|
T Consensus 30 ~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~S 109 (372)
T 3dtg_A 30 LANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSS 109 (372)
T ss_dssp HHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHH
T ss_pred hhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhc
Confidence 68999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEE
Q 036241 141 AERMCMPSPSVDQFVDAVKQIALANKRWVPPPGK-GTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLN 219 (367)
Q Consensus 141 a~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~-~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~ 219 (367)
|++|+||.++.+.+.++++++++.+.+|||+... .++||||+++++++.+|+.|+.++.++++++|+++|+..|.+++.
T Consensus 110 a~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~ 189 (372)
T 3dtg_A 110 ARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVS 189 (372)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEE
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCceeeeEecccccccccCcccce
Confidence 9999999999999999999999999999998765 689999999999999999999999999999999999999988888
Q ss_pred EEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEE----ECCEEEccCCCC
Q 036241 220 LYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV----KGNVISTPATNG 295 (367)
Q Consensus 220 l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v----~~~~l~TP~l~~ 295 (367)
+.+..++.|++|++++.+|+++||+++++++++|+++||||+||||..++|+|+|+++||||+| +|++|+|||+++
T Consensus 190 ~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~ 269 (372)
T 3dtg_A 190 VWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSG 269 (372)
T ss_dssp EEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCS
T ss_pred eecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccc
Confidence 8888889999999999999999999999999999999999999999877899999999999999 567999999999
Q ss_pred CCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhc------ceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 296 TILEGITRRSVIEIARDYGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 296 ~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~a------dEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
+||+||||++||++|+++|++|+||+|+++||.+| ||||+|||+++|+||.+|+++++.+.+++| +||+|++
T Consensus 270 ~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~ 348 (372)
T 3dtg_A 270 SLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMA 348 (372)
T ss_dssp SSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHH
T ss_pred cccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHH
Confidence 99999999999999999999999999999999988 999999999999999999999999999999 9999974
No 3
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=5.7e-78 Score=594.89 Aligned_cols=313 Identities=39% Similarity=0.673 Sum_probs=288.0
Q ss_pred CCCccCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChH
Q 036241 52 SDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPD 131 (367)
Q Consensus 52 ~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d 131 (367)
..++.+++||++|+||++|||||++++|+++. |.||+++|++++.|+|+|++||||||||||||+|+++||++++|||+
T Consensus 17 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~-w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~ 95 (358)
T 3uzo_A 17 QAKKLADIDWSTLGFSYIRTDLRYLAHWKDGE-WDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPD 95 (358)
T ss_dssp -------CCGGGCCSCCCCCSCEEEEEEETTE-ECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHH
T ss_pred ccccccCCCcccCCCCCcccCeeEEEEEeCCc-EECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHH
Confidence 44566789999999999999999999998765 99999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ceEEEEEEEEecCCcccccCCCceEEEEEEeccCCc
Q 036241 132 LNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGK-GTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNY 210 (367)
Q Consensus 132 ~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~-~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~ 210 (367)
+|++||++||++|+||.++.++|.++|+++++.|..|||+.+. +++||||+++++++.+|+.|+.++.++|+++|+++|
T Consensus 96 ~Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~ 175 (358)
T 3uzo_A 96 QNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPY 175 (358)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhh
Confidence 9999999999999999779999999999999999999998644 589999999988888999988889999999999999
Q ss_pred ccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEE-CCE-E
Q 036241 211 FKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVK-GNV-I 288 (367)
Q Consensus 211 ~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~-~~~-l 288 (367)
++.|.+++++.+++ +.|++|++++++|+++||+++++++++|+++||||+||+|..++|+|+|+++||||+++ ||+ |
T Consensus 176 ~~~g~~~v~l~~~~-~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l 254 (358)
T 3uzo_A 176 FKGGLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKF 254 (358)
T ss_dssp SCSSSCCEEEECCS-CCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEE
T ss_pred hhcCCccEEEEEEe-eeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEE
Confidence 99889999998875 89999999999998779999999999999999999999997546999999999999995 687 9
Q ss_pred EccCCCCCCccchHHHHHHHHHHH-CCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCC-C-ccccc
Q 036241 289 STPATNGTILEGITRRSVIEIARD-YGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKT-G-SRSVY 365 (367)
Q Consensus 289 ~TP~l~~~ILpGITR~sil~la~~-~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~-~-~G~vt 365 (367)
+||+ +++||+||||++||++|++ +|++|+||+|+++||.+|||+|+|||+++|+||.+|+..++.+.+++ + +||+|
T Consensus 255 ~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt 333 (358)
T 3uzo_A 255 VTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVT 333 (358)
T ss_dssp EEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHH
T ss_pred EECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHH
Confidence 9999 8999999999999999999 99999999999999999999999999999999999998888888864 4 89998
Q ss_pred cC
Q 036241 366 QE 367 (367)
Q Consensus 366 ~~ 367 (367)
++
T Consensus 334 ~~ 335 (358)
T 3uzo_A 334 RR 335 (358)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 4
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=3.6e-77 Score=594.76 Aligned_cols=318 Identities=31% Similarity=0.555 Sum_probs=292.3
Q ss_pred cccCCCccCCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEe
Q 036241 49 VFSSDDEYADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLF 128 (367)
Q Consensus 49 ~~~~~~~~~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lF 128 (367)
+...+.++.++||++|+||++|||||+.++|+.+.+|.||+|+|++++.|+|.|++|||||+||||||+|+++||++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~f 111 (386)
T 2coi_A 32 VTPATILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLF 111 (386)
T ss_dssp ECCCSSCCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEE
T ss_pred eeccCCcccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeec
Confidence 33455567788999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccC
Q 036241 129 RPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVG 208 (367)
Q Consensus 129 r~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~ 208 (367)
||++|++||++||++|+||.++.++|.++++++++.|..|+|+..++++||||+++++++.+|+.|+.+++++|+++|++
T Consensus 112 rld~H~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~ 191 (386)
T 2coi_A 112 QPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVG 191 (386)
T ss_dssp SHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECc
Confidence 99999999999999999997799999999999999999999975556899999999888889999888999999999999
Q ss_pred CcccCC-CccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEE---
Q 036241 209 NYFKEG-SAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVK--- 284 (367)
Q Consensus 209 ~~~~~g-~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~--- 284 (367)
+|+..| .+++++.+.+.+.|++|++++.+|+++||+++++++++|+++||||+||||.. +|+|+|++++|||+++
T Consensus 192 ~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~-~g~V~E~~~sNiF~v~~~~ 270 (386)
T 2coi_A 192 PYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGE-DHQITEVGTMNLFLYWINE 270 (386)
T ss_dssp CCC-----CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETT-TTEEEEETTEEEEEEEECT
T ss_pred ccccccccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECC-CCEEEEeCCceEEEEEEcC
Confidence 999877 78999999888889999999999997799999999999999999999999942 7999999999999996
Q ss_pred CC--EEEccCCCCCCccchHHHHHHHHHHH-CCCcEEEEEeCHHHHhhc------ceeEEEccccceEEeEEEEECCEEE
Q 036241 285 GN--VISTPATNGTILEGITRRSVIEIARD-YGYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRV 355 (367)
Q Consensus 285 ~~--~l~TP~l~~~ILpGITR~sil~la~~-~G~~V~Er~i~~~eL~~a------dEvf~~gTa~~I~PV~~I~~~g~~~ 355 (367)
|| +|+||+++++|||||||++||++|++ +|++|+||.|+++||.+| +|+|+|||+++|+||.+|+|+|+.+
T Consensus 271 ~g~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~ 350 (386)
T 2coi_A 271 DGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETI 350 (386)
T ss_dssp TSCEEEEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEE
T ss_pred CCCEEEEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEE
Confidence 88 99999999999999999999999999 799999999999999999 9999999999999999998889998
Q ss_pred EeC-CC-ccccccC
Q 036241 356 EFK-TG-SRSVYQE 367 (367)
Q Consensus 356 ~~~-~~-~G~vt~~ 367 (367)
.++ +| +||+|++
T Consensus 351 ~~~~~g~~g~vt~~ 364 (386)
T 2coi_A 351 HIPTMENGPKLASR 364 (386)
T ss_dssp ECGGGGGTTHHHHH
T ss_pred ecCCCCCcCHHHHH
Confidence 776 45 7999863
No 5
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=2.6e-76 Score=580.85 Aligned_cols=309 Identities=42% Similarity=0.704 Sum_probs=290.2
Q ss_pred CCCCCCCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHH
Q 036241 57 ADLDWDNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASR 136 (367)
Q Consensus 57 ~~~~~~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~R 136 (367)
+++||++|+||++|||||++++|+++. |.||+++|.+++.|+|.|++||||||||||||+|+++||++++|+|++|++|
T Consensus 7 ~~~~~~~l~fg~~~td~m~~~~~~~~~-w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~R 85 (345)
T 4dqn_A 7 VDLDWKNLGFEYHKLPFRYISYYKDGK-WDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAER 85 (345)
T ss_dssp CCCCGGGCCSCCCCCSCEEEEEEETTE-ECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHH
T ss_pred CCCCchhcCCCCcccCceEEEEecCCc-EECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHH
Confidence 378999999999999999999998866 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCC-CceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCC
Q 036241 137 MKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPG-KGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGS 215 (367)
Q Consensus 137 L~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~-~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~ 215 (367)
|++||++|+||.++.++|.++|+++++.|..|+|+.+ ++++||||+++++++.+|+.|+.+++++|+++|+++|++.+.
T Consensus 86 L~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~ 165 (345)
T 4dqn_A 86 LQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGL 165 (345)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSC
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCC
Confidence 9999999999977999999999999999999999864 358999999888887889988888999999999999988778
Q ss_pred ccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEE-ECCEEEccCCC
Q 036241 216 APLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVV-KGNVISTPATN 294 (367)
Q Consensus 216 ~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v-~~~~l~TP~l~ 294 (367)
+++++.++++|.|++|++++++|+++||+++++++++|+++|+||+||+|.+++|+|+|++++|||++ +|++|+||+ +
T Consensus 166 ~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~ 244 (345)
T 4dqn_A 166 APTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-S 244 (345)
T ss_dssp CCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-C
T ss_pred CCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-C
Confidence 89999998878999999999999977999999999999999999999999754699999999999998 899999999 8
Q ss_pred CCCccchHHHHHHHHHHH-CCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC--ccccccC
Q 036241 295 GTILEGITRRSVIEIARD-YGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG--SRSVYQE 367 (367)
Q Consensus 295 ~~ILpGITR~sil~la~~-~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~--~G~vt~~ 367 (367)
.+||+||||++||++|++ +|++|+|+.|+++||.+|||+|+|||+++|+||.+|+..++.+.++++ +||+|++
T Consensus 245 ~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~ 320 (345)
T 4dqn_A 245 PSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHK 320 (345)
T ss_dssp TTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHH
T ss_pred CCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHH
Confidence 999999999999999999 999999999999999999999999999999999999988888888764 8999863
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=9.5e-75 Score=573.93 Aligned_cols=314 Identities=32% Similarity=0.583 Sum_probs=290.3
Q ss_pred CCCccCCCCC-CCCCCccccCCceEEEEEcCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeCh
Q 036241 52 SDDEYADLDW-DNLGFSIKPADYMYTMKCSKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRP 130 (367)
Q Consensus 52 ~~~~~~~~~~-~~l~f~~~~td~~~~~~~~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~ 130 (367)
.+.++.+++| ++|+||++|||||+.++|+. .+|.||+++|++++.|+|.|++|||||+||||||+|+++||++++|||
T Consensus 15 ~~~~~~~~~~~~~l~fg~~~~d~m~~~~~~~-~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l 93 (365)
T 2a1h_A 15 TQKPHKKPGPGEPLVFGKTFTDHMLMVEWND-KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRP 93 (365)
T ss_dssp CSSCCCCCCTTSCCCTTCSCCSEEEEEEEET-TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESH
T ss_pred CCCccCCCccccccCcCCccccceeeeeccc-CeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCH
Confidence 3445557788 99999999999999999998 899999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCc
Q 036241 131 DLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNY 210 (367)
Q Consensus 131 d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~ 210 (367)
++|++||++||++|+||.++.++|.+++.++++.|..|+|...+.++||||+++++++.+|+.|+.+++++|+++|+++|
T Consensus 94 ~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~ 173 (365)
T 2a1h_A 94 WLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAY 173 (365)
T ss_dssp HHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccc
Confidence 99999999999999999779999999999999999999987544589999999888778899888889999999999999
Q ss_pred ccCC-CccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEE---CC
Q 036241 211 FKEG-SAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVK---GN 286 (367)
Q Consensus 211 ~~~g-~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~---~~ 286 (367)
+..| .+++++.+.+.+.|++|++++++|+++||+++++++++|+++||||+||+|. ++|+|+|++++|||+++ ||
T Consensus 174 ~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d-~~G~V~E~~~sNif~v~~~~dg 252 (365)
T 2a1h_A 174 FPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYG-PDHQLTEVGTMNIFVYWTHEDG 252 (365)
T ss_dssp SSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEET-TTTEEEEETTEEEEEEEECTTS
T ss_pred cccccccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEEC-CCCeEEEcCceEEEEEEecCCC
Confidence 9888 7899999988788999999999999779999999999999999999999933 27999999999999996 66
Q ss_pred E--EEccCCCCCCccchHHHHHHHHHHHC-CCcEEEEEeCHHHHhhc------ceeEEEccccceEEeEEEEECCEEEEe
Q 036241 287 V--ISTPATNGTILEGITRRSVIEIARDY-GYQVEERVIPVDELINA------DQVFCTGTAVVVAPVGSITYQNKRVEF 357 (367)
Q Consensus 287 ~--l~TP~l~~~ILpGITR~sil~la~~~-G~~V~Er~i~~~eL~~a------dEvf~~gTa~~I~PV~~I~~~g~~~~~ 357 (367)
+ |+|||++++|||||||++||++|+++ |++|+||.|+++||.+| ||+|+|||+++|+||.+|+++|+.+.+
T Consensus 253 ~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~ 332 (365)
T 2a1h_A 253 VLELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHI 332 (365)
T ss_dssp CEEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEEC
T ss_pred cEEEEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEee
Confidence 5 99999999999999999999999995 99999999999999999 999999999999999999888999888
Q ss_pred C-CC-ccccccC
Q 036241 358 K-TG-SRSVYQE 367 (367)
Q Consensus 358 ~-~~-~G~vt~~ 367 (367)
+ +| +||+|++
T Consensus 333 ~~~g~~g~vt~~ 344 (365)
T 2a1h_A 333 PTMENGPELILR 344 (365)
T ss_dssp TTGGGTTHHHHH
T ss_pred CCCCCcCHHHHH
Confidence 6 55 7999863
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.4e-61 Score=473.16 Aligned_cols=273 Identities=28% Similarity=0.442 Sum_probs=243.1
Q ss_pred cCCceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHH
Q 036241 80 SKHENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAV 158 (367)
Q Consensus 80 ~~~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i 158 (367)
..+.+|.||+++|.+++.|++.|++||||||||||||+|+++||++++|++++|++||++||++|+||.| +.++|.+++
T Consensus 27 ~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i 106 (328)
T 3u0g_A 27 RDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQ 106 (328)
T ss_dssp CCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHH
T ss_pred CCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
Confidence 3456899999999999999999999999999999999999888977899999999999999999999976 999999999
Q ss_pred HHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCC-ceEEEEEEeccCCcccCC--CccEEEEeecceeecCCCC-C
Q 036241 159 KQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAP-EYTFLAYASPVGNYFKEG--SAPLNLYIEEEFVRAAPGG-A 234 (367)
Q Consensus 159 ~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~-~~~~~I~~~P~~~~~~~g--~~~v~l~v~~~~~R~~p~g-~ 234 (367)
+++++.|.. .++||||+++.+.+.+|+.|+. .++++|++.|+++|+..+ .+++++.+++ +.|..|++ +
T Consensus 107 ~~lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~R~~~~~~~ 178 (328)
T 3u0g_A 107 RDVVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTSS-FTRHHVNVSM 178 (328)
T ss_dssp HHHHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEECS-SCCCCTTTSC
T ss_pred HHHHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEee-eeecCCCCcc
Confidence 999999863 5789999887655567887654 578899999998876432 2568887754 78988887 7
Q ss_pred CCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCC
Q 036241 235 GGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYG 314 (367)
Q Consensus 235 g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G 314 (367)
+++|+++||+++++++++|+++|+||+||+|. +|+|+|++++|||+++|++|+|||++. ||+||||++||++|+++|
T Consensus 179 ~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~--~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~~~g 255 (328)
T 3u0g_A 179 VRAKASGWYVNSILANQEATADGYDEALLLDV--DGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEAG 255 (328)
T ss_dssp TTSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHHHTT
T ss_pred cchhhhhhhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHHHcC
Confidence 99996679999999999999999999999996 799999999999999999999999987 999999999999999999
Q ss_pred CcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 315 YQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 315 ~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
++|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|++
T Consensus 256 ~~v~e~~i~~~eL~~adevf~tns~~~v~PV~~I--d~~~~--~~g~~g~vt~~ 305 (328)
T 3u0g_A 256 IEVIEKRITRDEVYTADEAFFTGTAAEVTPIREL--DNRTI--GGGARGPITEK 305 (328)
T ss_dssp CCEEECCCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHH
T ss_pred CeEEEEeCCHHHHhhCCEEEEEcchhhEEEEEEE--CCEEC--CCCCCCHHHHH
Confidence 9999999999999999999999999999999998 78765 887 8999863
No 8
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=1.4e-58 Score=448.13 Aligned_cols=269 Identities=31% Similarity=0.420 Sum_probs=237.3
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQ 160 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~ 160 (367)
+.+|.||+++|.+++.|++.|++||||||||||||+|++.||. ++|++++|++||.+||++|+||.+ +.+++.+++.+
T Consensus 6 ~~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~ 84 (308)
T 2eiy_A 6 GLIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKE 84 (308)
T ss_dssp CSEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHH
T ss_pred CeEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999999888887 799999999999999999999965 89999999999
Q ss_pred HHHHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccCC--CccEEEEeecceeecCCCC-CC
Q 036241 161 IALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKEG--SAPLNLYIEEEFVRAAPGG-AG 235 (367)
Q Consensus 161 lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g--~~~v~l~v~~~~~R~~p~g-~g 235 (367)
+++.+.. ...|||+++..++..+|+.|. .+++++|.+.|+++|+..+ .+++++.+.+ +.|..|++ ++
T Consensus 85 ~~~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~ 156 (308)
T 2eiy_A 85 VVRRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSS-WARFPANVMPG 156 (308)
T ss_dssp HHHHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECS-SCBCCTTTSCT
T ss_pred HHHhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEec-ceecCCCCcCc
Confidence 9998752 468999988766556777764 5688999999998876543 3578887765 67888765 48
Q ss_pred CcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCC
Q 036241 236 GVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGY 315 (367)
Q Consensus 236 ~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~ 315 (367)
++|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++. ||+||||++||++|+++|+
T Consensus 157 ~~Kt~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~ 233 (308)
T 2eiy_A 157 KAKVGGNYVNSALAKMEAVAAGADEALLLDE--EGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGY 233 (308)
T ss_dssp TSCBGGGHHHHHHHHHHHHHTTCSEEEEEBT--TSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTC
T ss_pred ceehhhhHHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCC
Confidence 9999977999999999999999999999996 799999999999999999999999988 9999999999999999999
Q ss_pred cEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 316 QVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 316 ~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|+
T Consensus 234 ~v~E~~i~~~dL~~adevfltns~~gv~pV~~i--d~~~~--~~g~~g~~~~ 281 (308)
T 2eiy_A 234 EVQVVRATRDQLYMADEVFMTGTAAEVTPVSMI--DWRPI--GKGTAGPVAL 281 (308)
T ss_dssp CEEEECCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHH
T ss_pred eEEEEeCCHHHHhhCCEEEEccCcceEEEEEEE--cCEEC--CCCCCCHHHH
Confidence 999999999999999999999999999999998 78765 777 799886
No 9
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=7.8e-59 Score=449.88 Aligned_cols=270 Identities=28% Similarity=0.486 Sum_probs=241.9
Q ss_pred CceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHH
Q 036241 82 HENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQ 160 (367)
Q Consensus 82 ~~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~ 160 (367)
+.+|.||+++|.+++.|++.|++||||||||||||+|++.||+ ++|++++|++||.+||++|+||.+ +.+++.+++.+
T Consensus 7 ~~~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~ 85 (309)
T 1iye_A 7 DYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRD 85 (309)
T ss_dssp SEEEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHH
T ss_pred CeEEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 4579999999999999999999999999999999999877883 389999999999999999999965 89999999999
Q ss_pred HHHHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccCC--CccEEEEeecceeecCCCC-CC
Q 036241 161 IALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKEG--SAPLNLYIEEEFVRAAPGG-AG 235 (367)
Q Consensus 161 lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~g--~~~v~l~v~~~~~R~~p~g-~g 235 (367)
+++.+. .+.+|||++++++...+|+.|+ .+++++|.+.|+++|+..+ .+++++.+.+ +.|..|++ .+
T Consensus 86 ~~~~~~-------~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~ 157 (309)
T 1iye_A 86 VIRKNN-------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPT 157 (309)
T ss_dssp HHHHTT-------CSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECS-SCCCCTTTSCT
T ss_pred HHHhcC-------CCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEee-eeccCCCCCCc
Confidence 999875 2578999988766556787754 3688899999998876543 2568887765 77888776 48
Q ss_pred CcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCC
Q 036241 236 GVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGY 315 (367)
Q Consensus 236 ~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~ 315 (367)
.+|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++.+||+||||++||++|+++|+
T Consensus 158 ~~K~~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~ 235 (309)
T 1iye_A 158 AAKAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGI 235 (309)
T ss_dssp TSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTC
T ss_pred cccchhhhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCC
Confidence 9998779999999999999999999999996 79999999999999999999999999999999999999999999999
Q ss_pred cEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 316 QVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 316 ~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+|+|+.++++||.+|||+|+|||+++|+||.+| +++.+ ++| +||+|+
T Consensus 236 ~v~E~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~~~ 283 (309)
T 1iye_A 236 EVREQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQV--GEGRCGPVTK 283 (309)
T ss_dssp CEEECCCBTTHHHHCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHH
T ss_pred eEEEEeCCHHHHhhCcEEEEccCCCEEEEEEEE--CCEEC--CCCCCCHHHH
Confidence 999999999999999999999999999999998 78765 777 899885
No 10
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=1.6e-57 Score=435.00 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=224.6
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
.+|.||+++|.+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.+ +.++|.++++++
T Consensus 2 ~~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g~--~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~l 76 (277)
T 3daa_A 2 YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHEL 76 (277)
T ss_dssp EEEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 479999999999999999999999999999999999 555 89999999999999999999965 899999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCcccccC--CCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCccc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGP--APEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKA 239 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~--~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt 239 (367)
++.|.. .++.+||++ ++|.++.....| ..+++++|++.|++++.....+++++.+.++ .| +..+++|+
T Consensus 77 i~~n~~-----~~~~lri~v-trG~~~r~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~-~r---~~~~~~Kt 146 (277)
T 3daa_A 77 VEKNEL-----NTGHIYFQV-TRGTSPRAHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVED-IR---WLRCDIKS 146 (277)
T ss_dssp HHHHTC-----CSEEEEEEE-ESCBCSCCSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEEC-CC---CSCTTSCB
T ss_pred HHhcCC-----CcEEEEEEE-EecCCCcCCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecC-cc---ccCCCcch
Confidence 999863 346677764 456665322223 4568899999998854211113466665543 23 23579998
Q ss_pred ccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEE
Q 036241 240 ISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEE 319 (367)
Q Consensus 240 ~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~E 319 (367)
+ ||+++++++++|+++|+||+||+| +|+|+|++++|||+++|++|+|||++.+||+||||++|+++|+++|++|+|
T Consensus 147 ~-nyl~~~la~~eA~~~g~~e~l~l~---~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e 222 (277)
T 3daa_A 147 L-NLLGAVLAKQEAHEKGCYEAILHR---NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKE 222 (277)
T ss_dssp S-CCHHHHHHHHHHHHTTCSEEEEEE---TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEEC
T ss_pred h-hhHHHHHHHHHHHHCCCCEEEEEc---CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEE
Confidence 5 999999999999999999999997 599999999999999999999999999999999999999999999999999
Q ss_pred EEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-ccccccC
Q 036241 320 RVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQE 367 (367)
Q Consensus 320 r~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~~ 367 (367)
+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||+|++
T Consensus 223 ~~i~~~el~~adevf~~ns~~~i~pV~~i--d~~~~--~~g~~g~~t~~ 267 (277)
T 3daa_A 223 IPFTTHEALKMDELFVTSTTSEITPVIEI--DGKLI--RDGKVGEWTRK 267 (277)
T ss_dssp CCCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--TTSSCCHHHHH
T ss_pred EeCCHHHHHhcCeeeeecChhhEEEEEEE--CCEEC--CCCCcCHHHHH
Confidence 99999999999999999999999999998 88755 777 8999863
No 11
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=5.9e-55 Score=414.97 Aligned_cols=255 Identities=18% Similarity=0.259 Sum_probs=223.0
Q ss_pred eeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIAL 163 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~ 163 (367)
.|.||+ .++.|++.|++||||||+|||||+| +|+ +|++++|++||.+||++|+||.++.++|.+.+.++++
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEE---CCE--EecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 589999 3578999999999999999999998 675 7999999999999999999998789999999999998
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccC-CCccEEEEeecceeecCCCCCCCcccc
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKE-GSAPLNLYIEEEFVRAAPGGAGGVKAI 240 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~-g~~~v~l~v~~~~~R~~p~g~g~~Kt~ 240 (367)
.+. ..|||+++..+.+..|+.|+ .+++++|.+.|+++++.. ..+++++.+.+ +.|..+..++.+|+.
T Consensus 73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~Kt~ 142 (269)
T 1i2k_A 73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSP-VRLGRNPHLAGIKHL 142 (269)
T ss_dssp HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECS-CCBCCCTTTTBCCBS
T ss_pred hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEec-eecCCCCcccCcchh
Confidence 642 46889877755445677665 468899999999876421 12467787764 566666678999995
Q ss_pred cCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEE
Q 036241 241 SNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEER 320 (367)
Q Consensus 241 ~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er 320 (367)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.+||+||||++|+++|+++|++|+|+
T Consensus 143 -n~~~~~~a~~~A~~~G~de~l~ld~--~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~ 219 (269)
T 1i2k_A 143 -NRLEQVLIRSHLEQTNADEALVLDS--EGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEV 219 (269)
T ss_dssp -CCHHHHHHHHHHTTSSCSEEEEEBT--TSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEE
T ss_pred -hhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEE
Confidence 8999999999999999999999996 7999999999999999999999999999999999999999999999999999
Q ss_pred EeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 321 VIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 321 ~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
.++++||.+|||+|+|||+++|+||.+| +|+.+ ++ ||+|+
T Consensus 220 ~i~~~eL~~adevfltns~~gv~pV~~i--d~~~~--~~--g~~~~ 259 (269)
T 1i2k_A 220 QASLEESLQADEMVICNALMPVMPVCAC--GDVSF--SS--ATLYE 259 (269)
T ss_dssp CCBHHHHHTCSEEEEECSSSCEEEEEEE--TTEEC--CC--CHHHH
T ss_pred ECCHHHHhhCCEEEEcCChhheEEEEEE--CCEEe--cC--cHHHH
Confidence 9999999999999999999999999988 78765 44 78775
No 12
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=1.3e-53 Score=406.92 Aligned_cols=246 Identities=20% Similarity=0.257 Sum_probs=213.7
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQI 161 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~l 161 (367)
.+|.|| .+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.+ +.+++.+++.++
T Consensus 5 ~~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 75 (272)
T 3lul_A 5 RVIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQK 75 (272)
T ss_dssp EECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TTE--ESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred EEEECC----ccccccCCccchhhcceEeEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 369999 78889999999999999999999999 565 79999999999999999999987 999999999999
Q ss_pred HHHcCCCCCCCCCceEEEEEEEEecCCcccccCCC--ceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCccc
Q 036241 162 ALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAP--EYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKA 239 (367)
Q Consensus 162 v~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~--~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt 239 (367)
++.|.. ...|||+.+..+.+..|+.++. .+++++. .|..+ ...++++.+. ++.|..+++++++|+
T Consensus 76 ~~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~~----~~~~v~l~~~-~~~r~~~~~~~~~Kt 142 (272)
T 3lul_A 76 IQKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT-FNYSI----QKHPVRLISI-NWLRDKANPLYQLKS 142 (272)
T ss_dssp HHHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCCC----CCSCEEEEEE-EEEECTTCGGGGSCB
T ss_pred HHhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE-ECCCC----ccccEEEEEE-eEEecCCCcccchhh
Confidence 998763 4567887766444456766543 3556555 54322 2235777664 588988888999999
Q ss_pred ccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEE
Q 036241 240 ISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEE 319 (367)
Q Consensus 240 ~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~E 319 (367)
+ ||+++++++++|+++|+||+||+|. +|+|+|++++|||+++|++|+|||++.+|||||||++|+++|+++|++|+|
T Consensus 143 ~-nyl~~~la~~~A~~~G~de~L~ld~--~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e 219 (272)
T 3lul_A 143 V-NYLEAIIAQRQAIAVGADDALFFNT--ENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQE 219 (272)
T ss_dssp S-CCHHHHHHHHHHHHTTCSEEEEEET--TSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEE
T ss_pred h-ccHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEE
Confidence 5 9999999999999999999999996 799999999999999999999999999999999999999999999999999
Q ss_pred EEeCHHHHhhcceeEEEccccceEEeEEEEECCEEE
Q 036241 320 RVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRV 355 (367)
Q Consensus 320 r~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~ 355 (367)
+.++++||.+|||+|+|||+++|+||.+| +++.+
T Consensus 220 ~~i~~~el~~adevf~~ns~~~v~PV~~i--d~~~~ 253 (272)
T 3lul_A 220 ISLTKKRIEDADAVFLTNSLQGIRRVLSL--DNIIF 253 (272)
T ss_dssp CCCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC
T ss_pred EECCHHHHhhCCEEEEEcCchhEEEEEEE--CCEEc
Confidence 99999999999999999999999999998 88865
No 13
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=5.7e-54 Score=413.20 Aligned_cols=255 Identities=19% Similarity=0.246 Sum_probs=221.1
Q ss_pred ceeeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 036241 83 ENFKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIA 162 (367)
Q Consensus 83 ~~w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv 162 (367)
..|.||+++ +.+++.|++||||||||||||+| ||+ +|++++|++||.+||++|+||.+ .++|.+++.+++
T Consensus 23 ~~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~-~~~l~~~i~~~v 92 (292)
T 2xpf_A 23 LDWVDGRPA----AELSVRDRGLAYGDGLFETLAVR---AGT--PRLLERHLARLEEGCRRLAIPLD-TAALRQELLAFC 92 (292)
T ss_dssp CEEETTEEC----SEEETTBHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHH
T ss_pred EEEECCEEE----EEEcccchhhhcCcEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHH
Confidence 369999998 78999999999999999999998 676 78999999999999999999985 889999999999
Q ss_pred HHcCCCCCCCCCceEEEEEEEEecCCcccccCC--CceEEEEEEeccCCcccC-CCccEEEEeecceeecCCCCCCCccc
Q 036241 163 LANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPA--PEYTFLAYASPVGNYFKE-GSAPLNLYIEEEFVRAAPGGAGGVKA 239 (367)
Q Consensus 163 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~--~~~~~~I~~~P~~~~~~~-g~~~v~l~v~~~~~R~~p~g~g~~Kt 239 (367)
+... ..|||+++....+..|+.|+ .+++++|.+.|+++++.. ..+++++.+.+. .|..+..++.+|+
T Consensus 93 ~~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~-~~~~~~~~~~~Kt 162 (292)
T 2xpf_A 93 AALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRT-RLAEQPLLAGLKH 162 (292)
T ss_dssp HHHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCC-CBCCCTTTTBCCB
T ss_pred HhCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeee-eccCCCCCCCcch
Confidence 8732 35889877643335677665 367899999999876521 124677877664 4544446789998
Q ss_pred ccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEE
Q 036241 240 ISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEE 319 (367)
Q Consensus 240 ~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~E 319 (367)
+ ||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++.+||+||||++||++|+++|++|+|
T Consensus 163 ~-ny~~~~la~~~A~~~G~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E 239 (292)
T 2xpf_A 163 L-NRLEQVLARAEWSDAGHAEGLMLDV--HERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAI 239 (292)
T ss_dssp S-CCHHHHHHHTTCCCTTCSEEEEEBT--TCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEE
T ss_pred h-hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEE
Confidence 5 8999999999999999999999996 799999999999999999999999999999999999999999999999999
Q ss_pred EEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 320 RVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 320 r~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
++++++||.+|||+|+|||+++|+||.+| +++.+ + +||+|+
T Consensus 240 ~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~--~g~~t~ 280 (292)
T 2xpf_A 240 RDVSMAELATADEVFLCNSQFGIWPVRAL--DEHVW--P--VGELTR 280 (292)
T ss_dssp ECBCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--C--CCHHHH
T ss_pred EeCCHHHHHhCCEEEEEcCcccEEEEEEE--CCEEe--C--CCHHHH
Confidence 99999999999999999999999999998 78765 3 578775
No 14
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.9e-53 Score=413.66 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=188.2
Q ss_pred eeeC---Cee--eeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHH
Q 036241 84 NFKQ---GQL--SRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAV 158 (367)
Q Consensus 84 ~w~n---g~i--~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i 158 (367)
+|.| |++ +|.+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.++.+++.+++
T Consensus 17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i 91 (315)
T 3sno_A 17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DGH--ACNVRRHGERFKASAALLGLPEPILEDWEKAT 91 (315)
T ss_dssp EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCcCHHHHHHHH
Confidence 5889 999 9999999999999999999999999999 565 79999999999999999999988899999999
Q ss_pred HHHHHHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCC-CccEEEEeecc-e----------
Q 036241 159 KQIALANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEG-SAPLNLYIEEE-F---------- 226 (367)
Q Consensus 159 ~~lv~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g-~~~v~l~v~~~-~---------- 226 (367)
+++++.+. +..+.+..|||++++.+.+..| .++++|++.|+++++... .+++++.+.+. +
T Consensus 92 ~~~v~~~~---~~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~ 163 (315)
T 3sno_A 92 QMGIESWY---SHPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIG 163 (315)
T ss_dssp HHHHHHHH---TC--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------
T ss_pred HHHHHhhc---ccCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccc
Confidence 99998732 1111357899988764333233 357888899987654210 13456655441 1
Q ss_pred -----------eecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCC
Q 036241 227 -----------VRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNG 295 (367)
Q Consensus 227 -----------~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~ 295 (367)
.|..|++++++|++ ||+.+++++++|+++|+||+||+|. +| |+|++++|||+++|++|+|||++.
T Consensus 164 ~~~r~~~s~~~~~~~p~~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~--~G-v~E~s~sN~f~~~~g~l~TPp~~~ 239 (315)
T 3sno_A 164 KATRGELSKVERTPAPWLTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDG--DR-VLEGATSTVVSFKGDKIRTPSPGG 239 (315)
T ss_dssp ------------------------------------------CEEEEEEET--TE-EEEESSSEEEEEETTEEEEECCC-
T ss_pred ccccccccccccccCcccccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeC--CC-cEEcCCeeEEEEECCEEEcCCCCC
Confidence 13456678899997 9999999999999999999999996 79 999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCCcccccc
Q 036241 296 TILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTGSRSVYQ 366 (367)
Q Consensus 296 ~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~~G~vt~ 366 (367)
+||+||||++|+++|+++|++|+|+.++++||.+|||+|+|||+++|+||.+| +|+.+ + .||+++
T Consensus 240 ~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~i--d~~~~--~--~~~~~~ 304 (315)
T 3sno_A 240 DILPGTTQAALFAHATEKGWRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRL--DGHKL--R--KPDNEK 304 (315)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEE--SSSCC--C--CCTTHH
T ss_pred CcChhHHHHHHHHHHHHcCCEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEE--CCEEC--C--CChHHH
Confidence 99999999999999999999999999999999999999999999999999988 88866 3 356553
No 15
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=3e-51 Score=393.04 Aligned_cols=245 Identities=26% Similarity=0.272 Sum_probs=213.5
Q ss_pred eeCCeeeeCCCcccCccCccccccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHHH
Q 036241 85 FKQGQLSRYANIELSPSAAVLNYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSP-SVDQFVDAVKQIAL 163 (367)
Q Consensus 85 w~ng~i~p~~~~~i~~~~~~l~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~-~~e~l~~~i~~lv~ 163 (367)
|.+|++++..++++++.|++| |||+|||||+| +|+ +|++++|++||.+||++|+||.+ +.+++.+.+.++++
T Consensus 18 ~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~~ 90 (285)
T 3csw_A 18 RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGAD 90 (285)
T ss_dssp TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHHT
T ss_pred ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999 99999999999 565 89999999999999999999965 89999999999998
Q ss_pred HcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCC-CCCCcccccC
Q 036241 164 ANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPG-GAGGVKAISN 242 (367)
Q Consensus 164 ~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~-g~g~~Kt~~n 242 (367)
.+. +..|||+++.. . .++++|.+.|+++++ ..+++++.+.+ +.|..+. .+.++|++ |
T Consensus 91 ~~~--------~~~~iR~~v~~---------~-~~~~~i~~~p~~~~~--~~~~~~l~~~~-~~~~~~~~~~~~~Kt~-~ 148 (285)
T 3csw_A 91 EFK--------QEVRIKVYLFP---------D-SGEVLFVFSPLNIPD--LETGVEVKISN-VRRIPDLSTPPALKIT-G 148 (285)
T ss_dssp TCS--------SCEEEEEEECT---------T-TCCEEEEEEECCCCC--CTTCEEEEECS-SCCCCTTTSCTTCCBT-T
T ss_pred hhC--------CCeEEEEEEEc---------C-CCEEEEEEEeCCCcc--ccCCeEEEEEe-EEecCCCCCCCccchh-c
Confidence 653 34799987621 1 126788899998765 23567777754 4443222 34699997 5
Q ss_pred chHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEe
Q 036241 243 YAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVI 322 (367)
Q Consensus 243 Y~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i 322 (367)
|+.+++++++|++ +||+||+|. +|+|+|++++|||+++||+|+|||++.++|+||||++||++|+++|++|+|+++
T Consensus 149 ~l~~~la~~~A~~--~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i 224 (285)
T 3csw_A 149 RTDIVLARREIVD--CYDVILLGL--NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVV 224 (285)
T ss_dssp CHHHHHHHTTCSS--SSEEEEECT--TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred cHHHHHHHHHHHh--CCeEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 9999999988877 999999996 799999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhhcceeEEEccccceEEeEEEEECCEEEEeCCC-cccccc
Q 036241 323 PVDELINADQVFCTGTAVVVAPVGSITYQNKRVEFKTG-SRSVYQ 366 (367)
Q Consensus 323 ~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~~~~~~~-~G~vt~ 366 (367)
+++||.+|||+|+|||+++|+||.+| +++.+ ++| +||+|+
T Consensus 225 ~~~dL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~t~ 265 (285)
T 3csw_A 225 WVWELFEADEMFLTHTSAGVVPVRRL--NEHSF--FEEEPGPVTA 265 (285)
T ss_dssp BHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--CSSSCCHHHH
T ss_pred CHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--CCCCCCHHHH
Confidence 99999999999999999999999998 78755 777 899886
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-47 Score=360.76 Aligned_cols=230 Identities=21% Similarity=0.262 Sum_probs=193.4
Q ss_pred eeeCCeeeeCCCcccCccCccccc-cCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHH
Q 036241 84 NFKQGQLSRYANIELSPSAAVLNY-GQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIA 162 (367)
Q Consensus 84 ~w~ng~i~p~~~~~i~~~~~~l~y-G~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv 162 (367)
.|.||+.. +++.|++||| |||+|||||+| +|+ +|++++|++||.+||++|+||.+..+++.+.+.+++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 48899954 3899999999 99999999998 565 899999999999999999999764488999999998
Q ss_pred HHcCCCCCCCCCceEEEEEEEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccC
Q 036241 163 LANKRWVPPPGKGTLYIRPLLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISN 242 (367)
Q Consensus 163 ~~~~~~vP~~~~~~lyIRp~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~n 242 (367)
+.+. +.+..|||+++..++..+++.|.+ .+..+++.. ++++.+.+ + |..|+ ++.+|+. |
T Consensus 71 ~~~~------~~~~~~vR~~v~~g~~~~~~~p~~--------~~~~~~~~~---g~~l~~~~-~-r~~~~-~~~~Kt~-n 129 (246)
T 2zgi_A 71 RAFP------KAPCLRLRFTVGEGVRLSEARPYA--------PLPLSLYRE---GVRVRLTG-Y-RVHPD-LARYKTG-N 129 (246)
T ss_dssp TSCT------TCSEEEEEEEEETTEEEEEEEECC--------CCCTHHHHH---CBCEEEEE-E-ECCTT-TTTSCBS-C
T ss_pred HhcC------CCCCEEEEEEEECCCCccCcCcCC--------CCchhHhhc---CeEEEEec-c-cCCCC-Cccchhh-h
Confidence 7762 135789999887544334432211 111222333 35566655 4 88887 8899997 8
Q ss_pred chHHHHHHHHHHhCCCceEEEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEe
Q 036241 243 YAPVLKALIRAKSRGFSDVLYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVI 322 (367)
Q Consensus 243 Y~~~~~a~~eA~~~G~de~L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i 322 (367)
|+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|| .++|+||||++|+++|+++|++|+|+.+
T Consensus 130 ~~~~~~a~~~A~~~g~de~l~ld~--~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i 204 (246)
T 2zgi_A 130 YLPYRLALEEARKEGAFEGLLLDA--FGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERGLF 204 (246)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEEeC
Confidence 999999999999999999999996 79999999999999999999999 7899999999999999999999999999
Q ss_pred CHHHHhhcceeEEEccccceEEeEEEEECCEE
Q 036241 323 PVDELINADQVFCTGTAVVVAPVGSITYQNKR 354 (367)
Q Consensus 323 ~~~eL~~adEvf~~gTa~~I~PV~~I~~~g~~ 354 (367)
+++||.+ |+|+|||+++|+||.+| +|+.
T Consensus 205 ~~~dL~~--evfltns~~gi~pV~~i--d~~~ 232 (246)
T 2zgi_A 205 RPEGLRG--HLLLAGSGVGLLPVRPP--PPEL 232 (246)
T ss_dssp CGGGCCS--EEEEEETTTEEEEBSSC--CGGG
T ss_pred CHHHHHh--hHeeecChhheEEEEEE--ChHH
Confidence 9999998 99999999999999987 6543
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=8.3e-43 Score=322.87 Aligned_cols=207 Identities=16% Similarity=0.160 Sum_probs=180.8
Q ss_pred cccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceEEEEEEEEe
Q 036241 106 NYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGAERMCMPSPSVDQFVDAVKQIALANKRWVPPPGKGTLYIRPLLIG 185 (367)
Q Consensus 106 ~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa~~l~~p~~~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp~~~g 185 (367)
.-|+++|||||+| ++|+ +|++++|++||.+||++|+||. +.+++.+.+.++++ +. .+.+|||+++..
T Consensus 13 ~~g~glFEtir~~--~~G~--~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~ 79 (221)
T 3qqm_A 13 TADFELIETMRWQ--PGTS--FLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GA-------RTAMRTRLALAR 79 (221)
T ss_dssp TSCCEEEEEEEEE--TTTE--ETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TC-------CSCEEEEEEEET
T ss_pred CCCCEEEEEEEEe--cCCc--CcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cC-------CCCEEEEEEEEc
Confidence 3588999999998 3565 7899999999999999999995 78999999999986 32 357899988765
Q ss_pred cCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceEEEEe
Q 036241 186 SGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDVLYLD 265 (367)
Q Consensus 186 ~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~L~ld 265 (367)
.+ .+.|.+.|+++++. .+++++.+.+ +.|..++.++++|++ ||+.+.+++++|+++|+||+||+|
T Consensus 80 ~g-----------~~~i~~~p~~~~~~--~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~~e~l~l~ 144 (221)
T 3qqm_A 80 NG-----------DATASAQPYEPLAA--DKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQADEVLLAN 144 (221)
T ss_dssp TS-----------CEEEEEEECCCCCT--TCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTCSEEEEEB
T ss_pred CC-----------CEEEEEEcCCCCCC--CCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCCcEEEEEC
Confidence 32 36678888887653 2467787765 567777788999995 999999999999999999999999
Q ss_pred ccCCCeEEecCceeEEEEEC-CEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccceEE
Q 036241 266 SVNRKNVEEVSSCNIFVVKG-NVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVVVAP 344 (367)
Q Consensus 266 ~~~~g~V~E~s~sNiF~v~~-~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~I~P 344 (367)
. +|+|+|++++|||++++ ++|+|||++.++|+||||+.|++++ +|+|+.++++||.+|||+|+|||+++|+|
T Consensus 145 ~--~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~p 217 (221)
T 3qqm_A 145 E--RGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIP 217 (221)
T ss_dssp T--TSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEE
T ss_pred C--CCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEE
Confidence 6 79999999999999998 9999999999999999999999974 79999999999999999999999999999
Q ss_pred eEE
Q 036241 345 VGS 347 (367)
Q Consensus 345 V~~ 347 (367)
|.-
T Consensus 218 V~l 220 (221)
T 3qqm_A 218 AKL 220 (221)
T ss_dssp EEE
T ss_pred EEE
Confidence 974
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=4.6e-39 Score=291.56 Aligned_cols=189 Identities=12% Similarity=0.110 Sum_probs=154.0
Q ss_pred cccCeEEEEEEEEeecCCeEEEeChHhHHHHHHHHH-hhcCCC--CC-CHHHHHHHHHHHHHHcCCCCCCCCCceEEEEE
Q 036241 106 NYGQGVYEGTKAYRTEDGRILLFRPDLNASRMKIGA-ERMCMP--SP-SVDQFVDAVKQIALANKRWVPPPGKGTLYIRP 181 (367)
Q Consensus 106 ~yG~~vFEt~ka~~~~dG~i~lFr~d~Hl~RL~~Sa-~~l~~p--~~-~~e~l~~~i~~lv~~~~~~vP~~~~~~lyIRp 181 (367)
+||+++|||||+| +|+ +|++++|++||.+|| ++++|| .+ +.+++.+.+. +++.+. .+.+|||+
T Consensus 2 ~~g~~vfEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIE---QGQ--AKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEE---TTE--ECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 6999999999998 676 789999999999999 999999 44 8899999888 777654 36899998
Q ss_pred EEEecCCcccccCCCceEEEEEEeccCCcccCCCccEEEEeecceeecCCCCCCCcccccCchHHHHHHHHHHhCCCceE
Q 036241 182 LLIGSGPVLGLGPAPEYTFLAYASPVGNYFKEGSAPLNLYIEEEFVRAAPGGAGGVKAISNYAPVLKALIRAKSRGFSDV 261 (367)
Q Consensus 182 ~~~g~~~~lg~~~~~~~~~~I~~~P~~~~~~~g~~~v~l~v~~~~~R~~p~g~g~~Kt~~nY~~~~~a~~eA~~~G~de~ 261 (367)
++... ..+ +...|..+ .++.... ....+..++++|++ ||+ ++++.+|+++|+||+
T Consensus 69 ~~~~g--~~~----------~~~~p~~~---~~~~~~~-------~~~~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~ 123 (194)
T 3ceb_A 69 DYNHH--DYV----------LQCFPYQQ---KVYRTFK-------PVFCDHIDYSLKFS-DRT--LLNNLLKQKEECDEI 123 (194)
T ss_dssp EECSS--CEE----------EEEEEECC---CCCCCEE-------EEECSSCCCSSCBS-CCH--HHHHHHGGGTTSSEE
T ss_pred EEeCC--ccE----------EEEecCCC---CcEEEEE-------EecCCCcchhhccc-CHH--HHHHHHHhhCCCCEE
Confidence 76432 111 22333321 1221111 11234567899985 898 668889999999999
Q ss_pred EEEeccCCCeEEecCceeEEEEECCEEEccCCCCCCccchHHHHHHHHHHHCCCcEEEEEeCHHHHhhcceeEEEccccc
Q 036241 262 LYLDSVNRKNVEEVSSCNIFVVKGNVISTPATNGTILEGITRRSVIEIARDYGYQVEERVIPVDELINADQVFCTGTAVV 341 (367)
Q Consensus 262 L~ld~~~~g~V~E~s~sNiF~v~~~~l~TP~l~~~ILpGITR~sil~la~~~G~~V~Er~i~~~eL~~adEvf~~gTa~~ 341 (367)
||+ . +|+|+|++++|||+++||+|+||| .++|+||||++|++ +++|+|++++++||.+|||+|+|||+++
T Consensus 124 l~l-~--~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~g 193 (194)
T 3ceb_A 124 MII-R--QGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNG 193 (194)
T ss_dssp EEE-E--TTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBC
T ss_pred EEE-e--CCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccC
Confidence 999 5 799999999999999999999999 68999999999998 5799999999999999999999999988
Q ss_pred e
Q 036241 342 V 342 (367)
Q Consensus 342 I 342 (367)
|
T Consensus 194 i 194 (194)
T 3ceb_A 194 L 194 (194)
T ss_dssp C
T ss_pred C
Confidence 5
No 19
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=20.45 E-value=1e+02 Score=24.49 Aligned_cols=45 Identities=13% Similarity=0.205 Sum_probs=32.5
Q ss_pred CCCccchHHH-HHHHHHHHCCCcEEE---------EEeCHHHHhhcceeEEEccc
Q 036241 295 GTILEGITRR-SVIEIARDYGYQVEE---------RVIPVDELINADQVFCTGTA 339 (367)
Q Consensus 295 ~~ILpGITR~-sil~la~~~G~~V~E---------r~i~~~eL~~adEvf~~gTa 339 (367)
.||-...+-. .|-+.|+++|+++.. -.++.+|+.+||-+++.+..
T Consensus 16 tGiAHTyMAAeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 70 (111)
T 2kyr_A 16 MGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAV 70 (111)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCC
Confidence 3555555544 444578899986544 36999999999999988875
Done!