Query 036242
Match_columns 330
No_of_seqs 179 out of 836
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 18:35:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d7b_A Cellobiose dehydrogenas 98.8 2.6E-08 9.1E-13 86.8 10.1 79 14-97 42-122 (186)
2 4gd3_A NI/Fe-hydrogenase 1 B-t 86.8 2.5 8.5E-05 37.1 8.6 21 204-224 62-82 (235)
3 1kqf_C FDH-N gamma, formate de 74.9 8.2 0.00028 33.1 7.4 60 204-264 56-136 (217)
4 2l8s_A Integrin alpha-1; trans 74.6 0.99 3.4E-05 30.7 1.0 38 267-304 8-45 (54)
5 2knc_A Integrin alpha-IIB; tra 63.1 1.6 5.4E-05 29.7 0.1 35 267-301 11-45 (54)
6 1vf5_A Cytochrome B6; photosyn 49.3 70 0.0024 27.7 8.3 58 204-266 85-142 (215)
7 2k1a_A Integrin alpha-IIB; sin 43.5 13 0.00043 23.9 1.9 33 267-299 9-41 (42)
8 2l2t_A Receptor tyrosine-prote 32.6 15 0.00052 23.7 1.0 19 269-287 10-28 (44)
9 2qjy_A Cytochrome B; cytochrom 31.8 1.1E+02 0.0036 29.6 7.3 84 179-267 56-154 (445)
10 1pp9_C Cytochrome B; cytochrom 31.6 1E+02 0.0035 29.0 7.1 57 204-267 82-138 (379)
11 3ayf_A Nitric oxide reductase; 27.9 4E+02 0.014 27.6 11.3 53 134-190 349-412 (800)
12 3cx5_C Cytochrome B-C1 complex 27.6 1.4E+02 0.0049 28.1 7.3 59 204-267 81-139 (385)
13 2ks1_B Epidermal growth factor 27.4 12 0.00041 24.2 -0.2 16 271-286 13-28 (44)
14 4djk_A Probable glutamate/gamm 25.1 2.4E+02 0.0084 26.4 8.7 22 238-259 409-430 (511)
No 1
>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*
Probab=98.78 E-value=2.6e-08 Score=86.85 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=60.1
Q ss_pred EEEEEEEcCCC-CcEEEEEEcCCCCCCCCCCeEEEEEcCCCcEEEEEeecCCCCCCC-CCCCcceeeeeeeEEEECCEEE
Q 036242 14 VDLAFRRSTPS-SQWVTWALNPSGQRMAGSKCHVAFRNSTGAIRAYTSPIGSGTPTL-QEGSLSFRVTNITATLVGNEWT 91 (330)
Q Consensus 14 i~~~~~~~~~~-~gWVavGfs~~g~~M~gsd~vI~~~~~~G~v~v~~~~~~g~~~p~-~~~~~~~~l~~~s~~~~~g~~~ 91 (330)
-+|.++++.|. .||+|+|+. .+|.|++++|+|.|+ |++++++|+.+|+..|. .+++.++.++..+ .++++.++
T Consensus 42 ~d~~~qi~~p~~~gW~g~g~G---g~M~gs~l~v~w~~~-~~v~~S~R~a~g~~~P~~y~~~~~~~lL~gs-~vn~t~~~ 116 (186)
T 1d7b_A 42 TEFIGEVVAPIASKWIGIALG---GAMNNDLLLVAWANG-NQIVSSTRWATGYVQPTAYTGTATLTTLPET-TINSTHWK 116 (186)
T ss_dssp CCEEEEEEEETTCCEEEEETT---SSSSSSCEEEEEEET-TEEEEEEEECSSSSCCEECCSSCEEEECTTC-EECSSEEE
T ss_pred ccEEEEEEccCCCCEEEEecC---CCCCCCcEEEEEeCC-CEEEEEEEEecCccCCCccCCCceEEEcccc-cEeCCEEE
Confidence 35666666665 899999994 459999999999986 89999999999998875 5544555555432 26888888
Q ss_pred EEEEEe
Q 036242 92 IFARLH 97 (330)
Q Consensus 92 ~~~~~~ 97 (330)
+-++.+
T Consensus 117 ~~f~C~ 122 (186)
T 1d7b_A 117 WVFRCQ 122 (186)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 755544
No 2
>4gd3_A NI/Fe-hydrogenase 1 B-type cytochrome subunit; O2-tolerant H2:quinone oxidoreductase, membrane-bound, NI-Fe hydrogenase-cytochrome B complex; HET: LMT HEM; 3.30A {Escherichia coli}
Probab=86.83 E-value=2.5 Score=37.11 Aligned_cols=21 Identities=14% Similarity=0.379 Sum_probs=16.6
Q ss_pred ccchhhHHHHHHHHHHHhhee
Q 036242 204 IHRNIGIALFFLATVQVFALL 224 (330)
Q Consensus 204 ~H~~iGi~~~~l~~~Q~l~g~ 224 (330)
.|..+|++++++.++-.+.++
T Consensus 62 ~H~~~G~~~~~l~~~Rl~w~~ 82 (235)
T 4gd3_A 62 IHFSAGMVFTVVLLMRIYWAF 82 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 699999999888887766544
No 3
>1kqf_C FDH-N gamma, formate dehydrogenase, nitrate-inducible, cytochr B556(FDN) subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: f.21.1.1 PDB: 1kqg_C*
Probab=74.93 E-value=8.2 Score=33.11 Aligned_cols=60 Identities=15% Similarity=0.213 Sum_probs=39.2
Q ss_pred ccchhhHHHHHHHHHHHhheeec---cCCCC------------------CCcchhhHHHHHHHHHHHHHHHHHHHHhccc
Q 036242 204 IHRNIGIALFFLATVQVFALLLR---PKPDH------------------KYRLYWNIYHWAVGYAIIVTSVFNVLKGLSL 262 (330)
Q Consensus 204 ~H~~iGi~~~~l~~~Q~l~g~~r---p~~~~------------------~~R~~~~~~H~~~G~~~~ilai~ni~~Gl~l 262 (330)
.|.++|++++++.++-.+ .+.| |.+.+ +....+|...+..=.+++++.++.+.+|+.+
T Consensus 56 ~H~~~G~~~~~l~~~r~~-r~~r~~~p~~~~~~~~~~~~~yl~~~~~~~p~~~~~n~~~~~~~~~l~~l~~~~~~TG~~~ 134 (217)
T 1kqf_C 56 LHPFFGIAIFVALMFMFV-RFVHHNIPDKKDIPWLLNIVEVLKGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVII 134 (217)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHGGGSCCCGGGHHHHHSHHHHHTTCHHHHCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999988776444 1122 22110 1113466777776677788888999999877
Q ss_pred cC
Q 036242 263 LD 264 (330)
Q Consensus 263 ~~ 264 (330)
+.
T Consensus 135 ~~ 136 (217)
T 1kqf_C 135 WR 136 (217)
T ss_dssp CT
T ss_pred HH
Confidence 64
No 4
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=74.61 E-value=0.99 Score=30.71 Aligned_cols=38 Identities=13% Similarity=-0.064 Sum_probs=25.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHhheeeeeeeeechhhhh
Q 036242 267 IQWWHAYIVTAISSGIISAALEAITWTIVVKRKKASEE 304 (330)
Q Consensus 267 ~~~~~~~~~~v~~~~~~~i~lev~~~~~~~~~~~~~~~ 304 (330)
+-|.++.+++.++++++.+++-.+++-.++|+++.+.+
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~~~~~ 45 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKME 45 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCcchhh
Confidence 55777766776666666666666777777777765543
No 5
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=63.05 E-value=1.6 Score=29.73 Aligned_cols=35 Identities=11% Similarity=0.065 Sum_probs=22.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHhheeeeeeeeechh
Q 036242 267 IQWWHAYIVTAISSGIISAALEAITWTIVVKRKKA 301 (330)
Q Consensus 267 ~~~~~~~~~~v~~~~~~~i~lev~~~~~~~~~~~~ 301 (330)
+-|.++.+++.+++++..+++-.+++-.++||++.
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~GFFkR~~~~ 45 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPP 45 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCCC
Confidence 44666666666666666666666677666666653
No 6
>1vf5_A Cytochrome B6; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.21.1.2 PDB: 2d2c_A* 2e74_A* 2e75_A* 2e76_A* 2zt9_A* 1q90_B*
Probab=49.31 E-value=70 Score=27.73 Aligned_cols=58 Identities=24% Similarity=0.309 Sum_probs=34.8
Q ss_pred ccchhhHHHHHHHHHHHhheeeccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 036242 204 IHRNIGIALFFLATVQVFALLLRPKPDHKYRLYWNIYHWAVGYAIIVTSVFNVLKGLSLLDPE 266 (330)
Q Consensus 204 ~H~~iGi~~~~l~~~Q~l~g~~rp~~~~~~R~~~~~~H~~~G~~~~ilai~ni~~Gl~l~~~~ 266 (330)
.|..=.-..+++..+...-+++.-.=..+ |. .=|..|.+++++..++.++|..+....
T Consensus 85 ~H~~gAs~ffi~~ylHi~Rglyygsy~~p-~~----~~W~~Gv~l~~l~m~~aF~GYvLPwgq 142 (215)
T 1vf5_A 85 IHRWSASMMVLMMILHVFRVYLTGGFKKP-RE----LTWISGVILAVITVSFGVTGYSLPWDQ 142 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSSSSS-CS----HHHHHHHHHHHHHHHHHHHHTTTTCBH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhcccC-CC----ceeHhHHHHHHHHHHHHHcccccCCCc
Confidence 66666666666666666655544332111 11 124578888888888888887776544
No 7
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=43.46 E-value=13 Score=23.85 Aligned_cols=33 Identities=12% Similarity=0.072 Sum_probs=20.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHhheeeeeeeeec
Q 036242 267 IQWWHAYIVTAISSGIISAALEAITWTIVVKRK 299 (330)
Q Consensus 267 ~~~~~~~~~~v~~~~~~~i~lev~~~~~~~~~~ 299 (330)
+-|.++..+..+++++..+.+-.+++-.++||+
T Consensus 9 p~wiIi~s~l~GLllL~li~~~LwK~GFFkR~~ 41 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 41 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 457666666666666655555556666555554
No 8
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=32.62 E-value=15 Score=23.75 Aligned_cols=19 Identities=16% Similarity=-0.244 Sum_probs=7.9
Q ss_pred hhhHHHHHHHHHHHHHHHH
Q 036242 269 WWHAYIVTAISSGIISAAL 287 (330)
Q Consensus 269 ~~~~~~~~v~~~~~~~i~l 287 (330)
-.|+-+++.++++++.+++
T Consensus 10 ~aIA~gVVgGv~~v~ii~~ 28 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGL 28 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeehHHHHHHHHHHH
Confidence 3444444443444443333
No 9
>2qjy_A Cytochrome B; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_A* 2qjk_A* 2qjp_A* 1zrt_C* 2yiu_A*
Probab=31.77 E-value=1.1e+02 Score=29.61 Aligned_cols=84 Identities=18% Similarity=0.238 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhhcCCccC---------C----Cc--ccccchhhHHHHHHHHHHHhheeeccCCCCCCcchhhHHHHH
Q 036242 179 YIIGVAGWATGIDLSSGISS---------L----NR--DYIHRNIGIALFFLATVQVFALLLRPKPDHKYRLYWNIYHWA 243 (330)
Q Consensus 179 ~~l~i~g~~~~~~~~~~~~~---------~----~~--~~~H~~iGi~~~~l~~~Q~l~g~~rp~~~~~~R~~~~~~H~~ 243 (330)
++..+.|+.+++.+....+. + |+ .+.|.+=.-..++++.+-..-+++.-.=..+ |+ .=|.
T Consensus 56 ~iQilTGifLam~Y~p~~~~Af~Sv~~I~rdV~~GwliR~~H~~gAs~ffi~iylHi~RglyygsY~~P-r~----~~W~ 130 (445)
T 2qjy_A 56 VLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAP-RE----VTWI 130 (445)
T ss_dssp HHHHHHHHHHHTTCCCSTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSTT-CH----HHHH
T ss_pred HHHHHHHHHHHeeccCCcHHHHHHHHHHHhhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC-cc----ceee
Confidence 33446788888775542110 0 11 2278776666666666666666554332111 21 2467
Q ss_pred HHHHHHHHHHHHHHHhccccCCCc
Q 036242 244 VGYAIIVTSVFNVLKGLSLLDPEI 267 (330)
Q Consensus 244 ~G~~~~ilai~ni~~Gl~l~~~~~ 267 (330)
.|.+++++..++.++|..+.....
T Consensus 131 ~Gv~l~ll~m~taF~GYvLPwgQm 154 (445)
T 2qjy_A 131 VGMLIYLAMMATAFMGYVLPWGQM 154 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCBHH
T ss_pred ehHHHHHHHHHHHHHheeccCCcc
Confidence 999999999999999998886553
No 10
>1pp9_C Cytochrome B; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.32.1.1 f.21.1.2 PDB: 1bgy_C* 1be3_C* 1l0n_C* 1ntk_C* 1ntm_C* 1ntz_C* 1nu1_C* 1l0l_C* 1ppj_C* 1sqb_C* 1sqp_C* 1sqq_C* 1sqv_C* 1sqx_C* 2a06_C* 2fyu_C* 2ybb_C* 1qcr_C* 3l70_C* 2bcc_C* ...
Probab=31.60 E-value=1e+02 Score=29.04 Aligned_cols=57 Identities=18% Similarity=0.217 Sum_probs=35.2
Q ss_pred ccchhhHHHHHHHHHHHhheeeccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 036242 204 IHRNIGIALFFLATVQVFALLLRPKPDHKYRLYWNIYHWAVGYAIIVTSVFNVLKGLSLLDPEI 267 (330)
Q Consensus 204 ~H~~iGi~~~~l~~~Q~l~g~~rp~~~~~~R~~~~~~H~~~G~~~~ilai~ni~~Gl~l~~~~~ 267 (330)
.|.+=.-..++++.+-..-+++.-.=. +.| =|..|.+++++..++.++|..+.....
T Consensus 82 ~H~~gAs~ffi~~ylHi~Rglyygsy~-~~~------~W~~Gv~l~ll~m~~aF~GYvLPwgQm 138 (379)
T 1pp9_C 82 MHANGASMFFICLYMHVGRGLYYGSYT-FLE------TWNIGVILLLTVMATAFMGYVLPWGQM 138 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGG-SHH------HHHHHHHHHHHHHHHHHHHHHTTCBHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheec-Ccc------eehhhHHHHHHHHHHHheeeeccCcch
Confidence 666655555555555555444432211 111 457899999999999999988876543
No 11
>3ayf_A Nitric oxide reductase; oxidoreductase; HET: HEM BOG EPE LOP; 2.50A {Geobacillus stearothermophilus} PDB: 3ayg_A*
Probab=27.86 E-value=4e+02 Score=27.62 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=30.4
Q ss_pred chhhhhhhhhH--hhhhhhH-----HHHhhhcccccCCch----hhhhhHhhHHHHHHHHHHHHHHHh
Q 036242 134 QRKRNFHQFLS--ILMPMGA-----MMARYLKVFRFGNPA----WFYLHVACQVSAYIIGVAGWATGI 190 (330)
Q Consensus 134 ~~~~~~Hg~lM--il~p~gi-----~~aR~~k~~~~~~~~----Wf~~H~~~q~~~~~l~i~g~~~~~ 190 (330)
.+++.+||.+| ...|.-+ ++.|..+. +|. .-.+...+..++.+++++++.++.
T Consensus 349 n~lrT~Hg~~mIf~~~~~~~g~~~ylvP~~~g~----dp~~~~~L~~~~fwl~~~g~vl~~~s~~~G~ 412 (800)
T 3ayf_A 349 NIAKGYHLQLAIFWIATAWLGMGIFIAPLVGGQ----EPKKQGLLVDLLFWALVVLVGGSMIGQWLGV 412 (800)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 36788999999 2222222 22233321 144 445566666777777777777754
No 12
>3cx5_C Cytochrome B-C1 complex subunit 8; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.32.1.1 f.21.1.2 PDB: 3cxh_C* 1ezv_C* 1kb9_C* 1kyo_C* 1p84_C* 2ibz_C*
Probab=27.60 E-value=1.4e+02 Score=28.11 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=38.9
Q ss_pred ccchhhHHHHHHHHHHHhheeeccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 036242 204 IHRNIGIALFFLATVQVFALLLRPKPDHKYRLYWNIYHWAVGYAIIVTSVFNVLKGLSLLDPEI 267 (330)
Q Consensus 204 ~H~~iGi~~~~l~~~Q~l~g~~rp~~~~~~R~~~~~~H~~~G~~~~ilai~ni~~Gl~l~~~~~ 267 (330)
.|.+=.-..++++.+-..-+++.-.=..+ |+ .=|..|.+++++..++.++|..+.....
T Consensus 81 ~H~~gAs~ffi~iylHi~Rglyygsy~~P-r~----~~W~~Gv~l~ll~m~~aF~GYvLPwgQm 139 (385)
T 3cx5_C 81 LHANGASFFFMVMFMHMAKGLYYGSYRSP-RV----TLWNVGVIIFILTIATAFLGYCCVYGQM 139 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSTT-CH----HHHHHHHHHHHHHHHHHHHHHHHHCBHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCC-Cc----ceeeecHHHHHHHHHHHHHhhhccCCcc
Confidence 67776666666666666656554332111 21 2357899999999999999988876543
No 13
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=27.44 E-value=12 Score=24.20 Aligned_cols=16 Identities=13% Similarity=-0.130 Sum_probs=6.7
Q ss_pred hHHHHHHHHHHHHHHH
Q 036242 271 HAYIVTAISSGIISAA 286 (330)
Q Consensus 271 ~~~~~~v~~~~~~~i~ 286 (330)
|+-+++.++++++.++
T Consensus 13 IA~gVVgGv~~~~ii~ 28 (44)
T 2ks1_B 13 IATGMVGALLLLLVVA 28 (44)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred EEeehhHHHHHHHHHH
Confidence 4444444444443333
No 14
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=25.06 E-value=2.4e+02 Score=26.43 Aligned_cols=22 Identities=14% Similarity=0.143 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 036242 238 NIYHWAVGYAIIVTSVFNVLKG 259 (330)
Q Consensus 238 ~~~H~~~G~~~~ilai~ni~~G 259 (330)
++..+....+.++..++.++..
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~ 430 (511)
T 4djk_A 409 KGVKLVVAIVGLLTSIMAFIVS 430 (511)
T ss_dssp THHHHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHee
Confidence 3344444444444444444433
Done!