Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>036248
MTNEDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICN
RVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKP
TNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEE
ILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER
IRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK
G

High Scoring Gene Products

No gene products matching your query constraints were returned by the BLAST search.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036248
        (301 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091793 - symbol:AT3G29750 species:3702 "Arabi...   135  1.7e-11   2


>TAIR|locus:2091793 [details] [associations]
            symbol:AT3G29750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
            "aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006418 "tRNA aminoacylation for protein translation"
            evidence=IEA] InterPro:IPR018150 GO:GO:0005524 GO:GO:0005737
            EMBL:CP002686 GO:GO:0006508 GO:GO:0008233 GO:GO:0006418
            InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004812 PANTHER:PTHR22594
            InterPro:IPR013242 Pfam:PF08284 IPI:IPI00544562 RefSeq:NP_189618.1
            UniGene:At.53581 ProteinModelPortal:F4J487
            EnsemblPlants:AT3G29750.1 GeneID:822661 KEGG:ath:AT3G29750
            PhylomeDB:F4J487 ArrayExpress:F4J487 Uniprot:F4J487
        Length = 421

 Score = 135 (52.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
 Identities = 38/141 (26%), Positives = 74/141 (52%)

Query:   165 EMQTRQEPSEILQE--EEILVEDTVPKQLS--AKINNKPLSVLIDTGSTHNYLHPRLAHF 220
             E++  ++ S  L++  E+++++ T  K +     I +  + V ID+G+T N++   LA  
Sbjct:    96 ELEELEQDSYTLRQGMEQLVIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFS 155

Query:   221 LHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADA--VLGVQ 278
             L L    T    V +G  + I+S G C  ++  +Q V    +F +LD ++ D   +LG +
Sbjct:   156 LKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYE 215

Query:   279 WLEKLGKIITDHKALTMEFTY 299
             WL KLG+ + + +     F++
Sbjct:   216 WLSKLGETMVNWQNQDFSFSH 236

 Score = 87 (35.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
 Identities = 18/62 (29%), Positives = 31/62 (50%)

Query:    33 INHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS 92
             +NH+     + Q  SV  Y+  FE +C R   L      + F+ GL+P++Q  +   KP+
Sbjct:     3 LNHQPHYSGIQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELKPN 62

Query:    93 NL 94
              +
Sbjct:    63 GI 64


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.377    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      301       268   0.00096  114 3  11 22  0.47    33
                                                     32  0.39    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  195 KB (2111 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.90u 0.11s 22.01t   Elapsed:  00:00:02
  Total cpu time:  21.90u 0.11s 22.01t   Elapsed:  00:00:02
  Start:  Sat May 11 06:47:13 2013   End:  Sat May 11 06:47:15 2013

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