BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036248
(301 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356511037|ref|XP_003524238.1| PREDICTED: uncharacterized protein LOC100782971 [Glycine max]
Length = 1863
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/330 (32%), Positives = 154/330 (46%), Gaps = 50/330 (15%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
AL +AIE+RF PS Y + R LFKLTQ +SV Y + FE + NR+ L P +L CF+SG
Sbjct: 93 ALLQAIETRFAPSFYDDPRGALFKLTQRASVTEYLTEFERLANRIVGLSPPMLLSCFVSG 152
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L I+ E+ +P +L A+ALA+L EDKL + S T+ P P T +
Sbjct: 153 LNTEIRREVQAFQPVSLPHAMALARLQEDKLNDRRKHSR----TSLPPPQTPSPSLTTQH 208
Query: 138 NPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEIL--------------- 182
P PP P ++A + + + S + +L
Sbjct: 209 QPPRTKPPFVQRTPEEMAYRREKGLCYNCEEKWSSSHRCKGRVLLFIADSDEASSMDNPS 268
Query: 183 VEDTVPK-------------------------------QLSAKINNKPLSVLIDTGSTHN 211
+ED P +L IN+ +++L+D+GSTHN
Sbjct: 269 MEDPAPPTQATLPPFDPTPLLPHISLHAMAGVPATDTFRLYGVINHTRVTILVDSGSTHN 328
Query: 212 YLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRA 271
++ PR+A FL L +E T S V VGNG + + C +Q F +L S A
Sbjct: 329 FVQPRIAKFLGLPMEDTTSLQVMVGNGSVLECKQSCPATTLLLQQHSFTVTLRVLPISGA 388
Query: 272 DAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
D VLGV+WL LG IITD+ + TM+FT+ G
Sbjct: 389 DVVLGVEWLRTLGPIITDYTSFTMQFTHLG 418
>gi|356514101|ref|XP_003525745.1| PREDICTED: uncharacterized protein LOC100809540 [Glycine max]
Length = 1232
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 146/300 (48%), Gaps = 19/300 (6%)
Query: 8 TRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP 67
+R L A+ +A+E+RF PS Y + LFK+ Q +V Y S FE + NRV L P
Sbjct: 54 SRNGFLTSWQAMLQALETRFAPSYYDDPYGALFKIQQRGTVNEYLSEFERLANRVVGLAP 113
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPT 127
L CFISGL P + E+ +P L A+ALAKL EDKL + N P+
Sbjct: 114 PLSLSCFISGLNPELHREVQALQPMCLPQAMALAKLQEDKLLDRRRNHRH----NFPVSP 169
Query: 128 TTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVE--D 185
T + N + + +N P PI RLT EM +++ +E +
Sbjct: 170 TPHHPNNPPPSSST-----SATNKP----PIRRLTPEEMALKRDKGLCYHCDEKCLNALS 220
Query: 186 TVPK----QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERI 241
+P ++ + L++L+D GSTHN++ R+A FL L V VG+G I
Sbjct: 221 GMPAPETFRVYGTVRRHQLTILVDGGSTHNFVQLRVAKFLGLPSTPMTPLPVMVGDGGVI 280
Query: 242 RSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +V +QG F D L S AD VLGVQWL LG + TD+ AL+M FT+ G
Sbjct: 281 HCDCRYPQVSITIQGHQFTTDLFGLPLSGADLVLGVQWLRALGPVTTDYTALSMSFTHLG 340
>gi|147773289|emb|CAN64782.1| hypothetical protein VITISV_003835 [Vitis vinifera]
Length = 1575
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 21/281 (7%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
+ +RFGPS + L ++ Q S+ YQ FE + NRV A++ F+ GL+P I
Sbjct: 482 LWARFGPSECEDFDEALSRIRQVGSLRDYQREFERLGNRVQGWTQRALVGTFMGGLRPNI 541
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP 142
+ + + KP L+++I LA++ +D+L + PT P L
Sbjct: 542 SDGIRMFKPQTLKESINLARMKDDQLARQRRFGRLAPPTRAP----------------LT 585
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPS-EILQEEEILVEDTVPK--QLSAKINNKP 199
LP + PP P+ P EI L+ TVPK ++ A+I
Sbjct: 586 LPFTQLATPPAPVAPVTEEQPAGQNHEGSPGLEITLHA--LMGWTVPKTMRIVARIGAHD 643
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
+ VL+D+GSTHN++ R+A+ L L + T SF+V V NGE +R +G +V+ +QG F
Sbjct: 644 VVVLVDSGSTHNFISERMANLLRLPVVPTESFMVRVANGENLRCQGRFEEVQINLQGTIF 703
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+ L + D VLG+QWLE LG + D + LTMEF ++
Sbjct: 704 SLTLYSLPLTGLDIVLGIQWLELLGSVGCDWRELTMEFMWE 744
>gi|147843077|emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 77/339 (22%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
RA+++RFG S Y + L +L QTS+VE Y+S FE + N++ L L CF+SG
Sbjct: 119 GFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSG 178
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L+ I+ + + PSNL A LAK+ E+ N ++ +PT
Sbjct: 179 LREDIRFMVRMLNPSNLHIAFGLAKMQEE-----NXAALRRTAKLGSVPTR--------- 224
Query: 138 NPLLPLPPPNPSNPPKIAL-PICRLTAVEMQTRQE------------PSEILQEEEILV- 183
L + PP+P P K A+ P+ RL+ +M+ R++ P + + +
Sbjct: 225 ---LAIGPPSP--PEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIM 279
Query: 184 ------EDTVPKQLSAK--------------------------------------INNKP 199
+D VPK A+ I +
Sbjct: 280 ECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRA 339
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
+ +L+DTGSTHN++ P + HL T V V NG+ +RSEG C+ V MQG +
Sbjct: 340 VVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLY 399
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
DF+IL D VLGVQWL+ LG I+ D L MEF+
Sbjct: 400 TIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFS 438
>gi|147774273|emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 155/339 (45%), Gaps = 77/339 (22%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
RA+++RFG S Y + L +L QTS+VE Y+S FE + N++ L L CF+SG
Sbjct: 152 GFVRALQTRFGSSPYEDPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSG 211
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L+ I+ + + PSNL A LAK+ E+ + + + + K + P TR
Sbjct: 212 LRENIRFMVRMLNPSNLHIAFGLAKMQEENVAALRRTA---KLGSVP----TR------- 257
Query: 138 NPLLPLPPPNPSNPPKIAL-PICRLTAVEMQTRQE------------PSEILQEEEILV- 183
L + PP+P P K A+ P+ RL+ +M+ R++ P + + +
Sbjct: 258 ---LAIGPPSP--PEKRAIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIM 312
Query: 184 ------EDTVPKQLSAK--------------------------------------INNKP 199
+D VPK A+ I +
Sbjct: 313 ECDESSDDEVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRA 372
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
+ +L+DTGSTHN++ P + HL T V V NG+ +RSEG C+ V MQG +
Sbjct: 373 VVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVRSEGSCAAVPLHMQGNLY 432
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
DF+IL D VLGVQWL+ LG I+ D L MEF+
Sbjct: 433 TIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFS 471
>gi|147789424|emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 153/338 (45%), Gaps = 75/338 (22%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
RA+++RFG S Y N L +L QTS+VE Y+S FE + N++ L L CF+SG
Sbjct: 117 GFVRALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSG 176
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L+ I+ + + PSNL A LAK+ E+ + + + + K + P TR
Sbjct: 177 LREDIRFMVCMLNPSNLHIAFGLAKMQEENVAALRRTA---KLGSVP----TR------- 222
Query: 138 NPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQE------------PSEILQEEEILV-- 183
L + PP+P ++ +P+ RL+ +M+ R++ P + + +
Sbjct: 223 ---LAIGPPSPPEK-RVIVPVQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIME 278
Query: 184 -----EDTVPKQLSAK--------------------------------------INNKPL 200
+D VPK A+ I + +
Sbjct: 279 CDESSDDKVPKSEVAEGRASKSKEETPIVEIEPGISIHALVGSPNPKTMRFLGHICGRAV 338
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
+L+DTGSTHN++ P + HL T V V NG+ + SEG C+ V MQG +
Sbjct: 339 VILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKVANGQAVCSEGSCAAVPLHMQGNLYT 398
Query: 261 ADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
DF+IL D VLGVQWL+ LG I+ D L MEF+
Sbjct: 399 IDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQMEFS 436
>gi|147783182|emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 160/347 (46%), Gaps = 58/347 (16%)
Query: 8 TRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP 67
T++R T+A++ RFGP+ Y + L +L QT++V AYQ FE + +RV L
Sbjct: 136 TKFRGPLTWDEFTKAVQLRFGPTDYEDPSEALTRLKQTTTVAAYQEAFEKLSHRVDGLPE 195
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK--LQSYNQKSISWKPTNTPI 125
+ ++ CFI+GL+ I+ ++ I +P L D I +A+LIE++ LQ + ++P +
Sbjct: 196 NFLIGCFIAGLQDEIRIDVKIKQPRTLADTIGVARLIEERNQLQRKPTQQTRFQPASV-T 254
Query: 126 PTTTRNETNIRLNPLLPLPPPNPSNPPKIALPIC--RLTAVEMQTRQEPSEILQEEE--- 180
P + N T L P PP N A P R+T E + R+E +E
Sbjct: 255 PKASPNPTAGVLGP----PPTQHMNQSSNAQPATFHRITNQEARERREKGLCYYCDEKFV 310
Query: 181 ----------ILVEDTV-----------PKQ------------------------LSAKI 195
++ED+ P+Q + K+
Sbjct: 311 AGHRCERPQLFMIEDSPHMNTEDVEGAHPEQEHHEVIPEIYFHAIAGTEHPQTICVMGKL 370
Query: 196 NNKPLSVLIDTGSTHNYLHPRLAHF-LHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
NK + VLID GSTHN++ + F L + + F V V N E+I G C + +
Sbjct: 371 KNKNVMVLIDGGSTHNFIDQAIIVFKFGLPVIRDRKFEVMVANREKIECAGQCRSLTLTI 430
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG AD++IL + VLGVQWLE LG I D+K LTM F +G
Sbjct: 431 QGYSVTADYYILPVAACQLVLGVQWLETLGPIEMDYKQLTMNFKMEG 477
>gi|359479937|ref|XP_002269588.2| PREDICTED: uncharacterized protein LOC100257206 [Vitis vinifera]
Length = 787
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 166/351 (47%), Gaps = 56/351 (15%)
Query: 2 TNEDMQTRYRALEEQA------ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTF 55
N+ Q +R L+E+ + +RFGPS + L ++ Q ++ YQ F
Sbjct: 97 ANQWWQWLHRTLKEEGHVISWEKFEEELWARFGPSGCEDFDEALSRIKQLGTLRDYQREF 156
Query: 56 ENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKS 115
E + NRV A++ F+ GLK I + + + KP +L++ I LA++ +D++ Q+
Sbjct: 157 EKLGNRVQGWTQKALVGTFMGGLKAEIVDAIRMFKPQSLKEVINLARMRDDQIA--RQRR 214
Query: 116 ISW-KPTNTPI--PTTTRNETNIRLNPLLPLPPPNPSNPPKIALPIC-----RLTA---- 163
W P PI P TR + I P+ L K A +C R TA
Sbjct: 215 FMWLPPVRAPIALPQATRVDPAIPAKPIKSLSWEEMQR--KRAQGLCFNCNERFTAGHRC 272
Query: 164 --------------------VEMQTRQ-----EPSEILQEE---EI----LVEDTVPK-- 189
+ QT + E +E+ + E EI L T PK
Sbjct: 273 QKPQLLLLKGHEGNVDCGNGTDQQTWEDDHGGEAAEVQEHEPKLEITLHALTGWTAPKTM 332
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++AK+ + VLID+GSTHN++ RLA+ L L + T +F V V NGER++ +G K
Sbjct: 333 RVTAKMGPHEVMVLIDSGSTHNFISNRLANKLRLPVIPTETFPVWVANGERLKCQGRYDK 392
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V+ E+QG F L S D VLGVQWLE LG ++ + K LTM+F ++
Sbjct: 393 VRVELQGTEFYLTLFSLPLSGLDLVLGVQWLEMLGSVVCNWKQLTMDFIWE 443
>gi|147842329|emb|CAN76208.1| hypothetical protein VITISV_041623 [Vitis vinifera]
Length = 522
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 158/315 (50%), Gaps = 35/315 (11%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
ED + EE+ + +RFGP + L K+ Q S+ YQ FE + NRV
Sbjct: 132 EDRVVTWELFEEE------LWARFGPIECEDFDEALSKVRQIGSLRDYQKEFERLGNRVH 185
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKP--- 120
A++ F+ GL+ I + + KP L++A +LA + +++LQ +Q+ IS P
Sbjct: 186 GWSQKALVGSFMGGLRSEISETIRMFKPKTLKEATSLAHMKDEQLQ--HQRRISRPPLPI 243
Query: 121 -TNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPIC-----RLTA----VEMQTRQ 170
T +PTTT+ RL+ + A +C + T+ E T++
Sbjct: 244 RTLLALPTTTKASHVKRLS--------WEEMQKRRAQGLCFNCDEKFTSGHRCKEGDTKE 295
Query: 171 EPSEILQEEEI----LVEDTVPK--QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLA 224
+++ + EI L+ T K +++AKI + VLID+GSTHN++ ++ LHL
Sbjct: 296 AETDLPSDPEISLHALIGWTTTKTMRVTAKIGTHDVVVLIDSGSTHNFISDKVVALLHLP 355
Query: 225 IEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
+ T F V V NG+ ++ +G + +QG+ F F+ L + D VLGVQWLE+LG
Sbjct: 356 VVPTAPFHVRVANGQPLKCQGRFDNIHILLQGIPFSITFYSLPLNGLDLVLGVQWLEQLG 415
Query: 285 KIITDHKALTMEFTY 299
++ D K +TMEF +
Sbjct: 416 SVVCDWKQMTMEFQW 430
>gi|147838975|emb|CAN68101.1| hypothetical protein VITISV_042364 [Vitis vinifera]
Length = 566
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 154/340 (45%), Gaps = 45/340 (13%)
Query: 2 TNEDMQTRYRALEEQ------AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTF 55
TN+ Q R+ E+ A + +RFGP+ + L ++ Q S+ YQ F
Sbjct: 98 TNQWWQWLRRSYSEEGKEVAWADFEEELWARFGPTECEDFDEALSRVKQMGSLRDYQREF 157
Query: 56 ENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYN--- 112
E + NRV A++ F+ GLK I +++ + KP +L++AI+LA++ +D+L
Sbjct: 158 EKLGNRVQGWTQKALVGMFMGGLKSEIADDIRMFKPKSLKEAISLARMRDDQLTCQXRFT 217
Query: 113 --------QKSISWKPTNTPIPT---------TTRNETNIRLN-------------PLLP 142
Q S + + P PT R + N P L
Sbjct: 218 RPLQXNXPQPBFSTQMKSKPTPTMKRLTWEEMXKRRAXGLXFNCDDKFTXGHKCRGPQLL 277
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPK--QLSAKINNKPL 200
L N S P K + + + EP L + PK +++ KI +
Sbjct: 278 LLEGN-SXPNKENDIDEEIEEPAINEQTEPXISFH---ALTGWSTPKTMRITTKIAQHEV 333
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
VLID+GSTHN++ ++A+ LHL + T F V V NG ++ + V +QG+ F
Sbjct: 334 VVLIDSGSTHNFISEKVAYMLHLPVVPTKPFTVKVANGTPLKCQWRFEHVHVILQGIPFS 393
Query: 261 ADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+ L + D VLGVQWLE+LG ++ + K LTMEF ++
Sbjct: 394 LTLYSLPLTXLDLVLGVQWLEQLGTVVCNWKKLTMEFQWE 433
>gi|147806355|emb|CAN67624.1| hypothetical protein VITISV_037284 [Vitis vinifera]
Length = 921
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/288 (33%), Positives = 138/288 (47%), Gaps = 25/288 (8%)
Query: 14 EEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDC 73
E Q +T+ + RFGP+ Y + L L QTS V AY TFE + ++V L ++ C
Sbjct: 39 ELQDEVTKVVLLRFGPTDYEDPSEALTXLRQTSXVAAYHETFEKLSHQVDGLPEAFLVGC 98
Query: 74 FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNET 133
FI+GL+ I+ + I +P L AI +A+LIE+ Q Q+ +++ P+ +T+R
Sbjct: 99 FITGLRDXIRLDXKIKQPKVLAYAIGVARLIEEGNQL--QRKLNYPSRPQPVISTSRAGP 156
Query: 134 NIRLNPLLPLPPPNPSNPPKIALPICR-LTAVEMQTRQEPSEILQEEEILVEDTVPKQLS 192
N L P P S + R +T E + R+E K+L
Sbjct: 157 NSTSGVLSPPPNQRGSQSANVNPNTFRXITNQEARERRE-----------------KRLC 199
Query: 193 AKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
++K + D GSTHN++ + L I F V V N E+I G C V
Sbjct: 200 YYCDDK---FVPDGGSTHNFIDQAIVTXHGLPIIPAKKFQVMVANXEKIXCVGLCPTVTI 256
Query: 253 EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+QG AD+++L S VLGVQWLE LG I D+K LTM TYK
Sbjct: 257 SIQGKSITADYYVLPVSXCQLVLGVQWLETLGPIEMDYKKLTM--TYK 302
>gi|147770944|emb|CAN69535.1| hypothetical protein VITISV_013569 [Vitis vinifera]
Length = 617
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 145/315 (46%), Gaps = 25/315 (7%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
ED + EE+ + + FGP+ + L K+ Q S+ YQ FE + NRV
Sbjct: 22 EDRLVAWELFEEE------LWAHFGPTKCEDFDEALTKVRQIGSLSDYQKEFERLGNRVH 75
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNT 123
A++ F+ GL+ I + KP L++A +LA++ + +LQ + S P T
Sbjct: 76 GWSQKALVGSFMGGLRSEISETTCMFKPKTLKEATSLARMKDKQLQCQRRISQPPLPIRT 135
Query: 124 PI--PTTT---------------RNETNIRLNPLLPLPPPNPSNPPKIALPICRLTA-VE 165
P+ PTT+ R + N + P+I L + E
Sbjct: 136 PLALPTTSKASHVKRLSWEEMQRRRAKGLCFNYDDKFTSAHRCKGPQILLLEGSIDDDSE 195
Query: 166 MQTRQEPSEILQEEEI-LVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLA 224
++ ++I + EI L T KI + V ID+GSTHN++ ++A LHL
Sbjct: 196 GDIKEAKTDIPSDPEISLHALTGWTTAKTKIGTHDIVVFIDSGSTHNFISDKVAALLHLL 255
Query: 225 IEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
+ T F V V N + ++ +G + +QG+ F F+ L + D VLGVQWLE+LG
Sbjct: 256 VVPTAPFHVRVANDQPLKCQGRFHNIHILLQGIPFSITFYSLPLTSLDLVLGVQWLEQLG 315
Query: 285 KIITDHKALTMEFTY 299
++ D K +TMEF +
Sbjct: 316 SVVCDWKRMTMEFQW 330
>gi|147772855|emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
Length = 1308
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 41/294 (13%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
A + +RFGP + L ++ Q ++ YQ FE + NRV A++ F+
Sbjct: 74 AFEDEVRARFGPPDSEDFDEALSRVRQMGTLRDYQREFERLRNRVRGWTQKALVGTFMGD 133
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
LKP + + + + KP ++++AI+LAK+ +D+L Q+ + P+ R
Sbjct: 134 LKPEVADGIRMFKPQSVKEAISLAKMRDDQLA--RQRRFA-------RPSALRASI---- 180
Query: 138 NPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEE-----EI----LVEDTVP 188
P P ++ + T +E SEI +++ EI L VP
Sbjct: 181 --------PEDETPEEMG---------GVNTTREISEIEEDDNGKEPEITLHALTGWIVP 223
Query: 189 K--QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGH 246
+ Q+ A I + LID+GSTHN++ R+ L L ++ T F V V NGER+ +G
Sbjct: 224 RTMQIKAIIGAHDVVALIDSGSTHNFISDRVVETLRLLVKPTTPFTVRVANGERLSCKGK 283
Query: 247 CSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
K+ +QG F DF + + D VLG+QWLE LG ++ D K TM+F ++
Sbjct: 284 YEKLTVNLQGNEFHLDFFSVPLNGLDMVLGIQWLETLGSVVCDWKKRTMDFIWE 337
>gi|147860462|emb|CAN82562.1| hypothetical protein VITISV_014148 [Vitis vinifera]
Length = 1384
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 145/319 (45%), Gaps = 39/319 (12%)
Query: 17 AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFIS 76
A + +RFGP+ + L ++ Q SS+ YQ FE + NRV A++ F+
Sbjct: 209 ADFEEELWARFGPTECEDFDEALSRVKQMSSLRDYQREFEKLGNRVQGWTQKALVGTFMG 268
Query: 77 GLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ-----------SYNQKSISWKPTNTPI 125
LK I +++ + KP +L++AI LA+ +D+L ++ Q S + + P
Sbjct: 269 SLKSEIADDIRMFKPKSLKEAIXLARXRDDQLTRQRRFTRPLQPNWPQPDFSTQMKSKPT 328
Query: 126 PTTTR---NETNIRL-------------------NPLLPLPPPNPSNPPKIALPICRLTA 163
PT R E R P L L N S+P K +
Sbjct: 329 PTMKRLTWEEMQKRRAQGLCFNCDDKFTVGHKCRGPQLLLLEGN-SSPNKEDDIDEEIEE 387
Query: 164 VEMQTRQEPSEILQEEEILVEDTVPK--QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFL 221
+ + EP L + PK +++ KI + VLID+GSTHN++ ++ L
Sbjct: 388 PAINEQTEPEIFFHA---LTGWSTPKTMRITTKIGQHEVVVLIDSGSTHNFISEKVVDML 444
Query: 222 HLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
HL T F V V NG ++ +G V +QG+ F + L + D VLGVQWLE
Sbjct: 445 HLPXVPTDPFTVKVANGTPLKCQGRFEHVHVILQGIPFSLTLYSLPLTGLDLVLGVQWLE 504
Query: 282 KLGKIITDHKALTMEFTYK 300
+LG I+ + K LTMEF ++
Sbjct: 505 QLGTIVCNWKKLTMEFQWZ 523
>gi|89887334|gb|ABD78322.1| polyprotein [Primula vulgaris]
Length = 1359
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 146/318 (45%), Gaps = 37/318 (11%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGL 78
L + RFG + N L KL Q +SV+ Y+S FE I NRV +L + L FI GL
Sbjct: 84 LCDQMTKRFGENLNENPLDQLIKLKQRNSVKEYKSDFEIISNRVKDLSEEHKLTYFICGL 143
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSI----SWKPTNTPIPTTTRNETN 134
K I + + P ++ A ++AK E+KL + + S P N + T N T
Sbjct: 144 KEEIGLTVKMLFPKSIETAFSIAKYQEEKLHLEKKPNFRTFQSQAPNNQATFSKTNNTTA 203
Query: 135 I-RLNPLLPLPPPNPSN---------------------PPKIAL-----------PICRL 161
I +L P+ L ++ PKI L +
Sbjct: 204 ITKLPPIKRLTQDELTDRRQKNLCYNCDEKWFRGHVCVKPKIFLLQNVEEFENEINEESV 263
Query: 162 TAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFL 221
++ E +EI + V ++ + K+ + +S+L+D+GSTHN++ P+ L
Sbjct: 264 EEIDENIVGENAEITLQAITGVTNSTSIRFVGKLKGQKVSILVDSGSTHNFIDPKWVPLL 323
Query: 222 HLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
L+ ++ V + NG++I+S G C KVK +Q FE DF +L D VLGV WL
Sbjct: 324 KLSNVQSDIMEVKIANGDKIKSSGTCEKVKLLIQENQFEVDFLLLPLVGYDLVLGVHWLS 383
Query: 282 KLGKIITDHKALTMEFTY 299
+LG I D K LTM FT+
Sbjct: 384 QLGVINCDFKNLTMTFTH 401
>gi|147784790|emb|CAN75225.1| hypothetical protein VITISV_035856 [Vitis vinifera]
Length = 793
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 133/280 (47%), Gaps = 37/280 (13%)
Query: 55 FENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ----- 109
FE + NRV A++ F+ GLK I + + + KP +L++AI+LA++ +D+L
Sbjct: 139 FEKLGNRVQGWTQKALVGTFMGGLKSEIADGIRMFKPKSLKEAISLARMRDDQLTRQRRF 198
Query: 110 ------SYNQKSISWKPTNTPIPTTTR---NETNIRLNPLLPLPPPNPSNPPKIALPICR 160
++ Q S + + P PT R E R L N + +
Sbjct: 199 TRPLQPNWPQPDFSTQMKSKPTPTMKRLTWEEMQKRRAQGLCF---NCDDKFTVGHKCRG 255
Query: 161 LTAVEMQTRQEPSEILQ--------------EEEI----LVEDTVPK--QLSAKINNKPL 200
L + ++ P++ E EI L + PK +++AKI +
Sbjct: 256 LQLLLLEENSSPNKEDDIDEEIEEPAINEQIEPEISFHALTGWSTPKTMRITAKIGQHEV 315
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
VLID+GSTHN++ ++A LHL + T F V V NG ++ +G V +QG+ F
Sbjct: 316 VVLIDSGSTHNFISEKVADMLHLPVVPTKPFTVKVVNGTPLKCQGRFEHVHVILQGIPFS 375
Query: 261 ADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+ L + D VLGVQWLE+LG ++ + K LTMEF ++
Sbjct: 376 LTLYSLPLTGLDLVLGVQWLEQLGTVVCNWKKLTMEFQWE 415
>gi|224109270|ref|XP_002333289.1| predicted protein [Populus trichocarpa]
gi|222835888|gb|EEE74309.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 67/295 (22%)
Query: 3 NEDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV 62
+ED + + EE+ + +RFGP + L ++ Q S+ YQ FE + NRV
Sbjct: 146 DEDREVTWPIFEEE------LWARFGPPECEDFDEALLRVRQGGSLREYQREFERLGNRV 199
Query: 63 TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTN 122
A++ F+ GLKP I + + KP +L++AI+LA++ +++L + S + +
Sbjct: 200 QGWTQKALVGTFMGGLKPDIAEGIMMFKPKSLKEAISLARMRDEQLTRQRRNSKPFSINH 259
Query: 123 TPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTR------------- 169
PI + + P +P+ A+P+ RL EMQ R
Sbjct: 260 NPIASFS--------------PTKSPA-----AMPMKRLAWDEMQKRRSQGICFNCDEKF 300
Query: 170 ------QEPSEILQE--EEILVED-------------------TVPK--QLSAKINNKPL 200
Q+P +L E +E ++D ++ + ++ A+I N+ L
Sbjct: 301 TPGHKCQKPRLLLLEGDDETSLQDDEEFEGDEPQISLHAITGWSIARTMRIMARIENQDL 360
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQ 255
+VLID+GSTHN++ R+A++LHL + T F V V NG ++ +G + +Q
Sbjct: 361 TVLIDSGSTHNFISERIANWLHLPVIPTQPFNVKVANGNPLKCQGRFENIHVLLQ 415
>gi|147864527|emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
Length = 1412
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 147/354 (41%), Gaps = 75/354 (21%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + A L L QT S+++Y F+ + R ++ L F+SGL
Sbjct: 145 ALNARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPR-ADIKESHALSFFLSGLIDE 203
Query: 82 IQNELAIHKPSNLRDAIALAKL-------IEDKLQSYNQKSISWKPTN------TPIPTT 128
+ + + KP L DA +LA+L +++K + ++ + PT TPI +
Sbjct: 204 LXMPVRMFKPQTLADAYSLARLQEIAVAALQNKPKPVSKGPSLYSPTTNHYHXATPITSI 263
Query: 129 TRNETNIRLNP--------LLPLPPPN--PSNPPKI-----------------ALPIC-- 159
++N TN+ LLPLPP P P I A +C
Sbjct: 264 SQNATNLSNTTFPKTTNAGLLPLPPSTNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFW 323
Query: 160 --------------RLTAVEMQTRQEPS--------EILQEEEILV----------EDTV 187
+L +++Q + E L EE+ + ED+
Sbjct: 324 CDEKFTPGHKCKRKQLYVMQIQVETDGEGPEGNLQMEGLXEEDEQIQLSLNALMSNEDSQ 383
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
L+ + L VLID+GS+HN+L ++A + +K V V NG+ + C
Sbjct: 384 TMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGQELHCTALC 443
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
S ++ MQG F A+ ++L D +LG QWL LG I + L M F G
Sbjct: 444 SDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATLGDISWNFNTLQMGFELNG 497
>gi|449496938|ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
Length = 701
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 132/315 (41%), Gaps = 55/315 (17%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S Y F + ++ +LD F++GL+P +Q E+ P L +
Sbjct: 105 ARLIRIRQEGSYSDYVKKFVIYSAPLPDMAKSILLDAFLTGLEPALQAEVISRHPQTLEE 164
Query: 97 AIALAKLIED------------------------KLQSYNQKSISWKPTNTPIPTTTRNE 132
+ A+L+ D KLQ N+K + PI + E
Sbjct: 165 CMKEAQLVNDRNIALKLAMEEMDKVEPKRSENNSKLQGKNEKK-----KDPPIKRLSDTE 219
Query: 133 TNIRLNPLLPL-------PPPNPSNPPKIALPICRLTAVEMQTRQ-----EPSEILQEEE 180
RL+ L P K L + L E R+ E SEI++ +
Sbjct: 220 FRARLDKGLCFRCNEKYSPGHRCKGREKRELMLLILNEEEDHERESNTEDEASEIIELNQ 279
Query: 181 ILVEDTVP--------------KQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+ + + P +L +N K + +LID+G+T+N++ L L L+I+
Sbjct: 280 LELNEDTPIELRLITGVTSKGTMKLKGHVNGKEVVILIDSGATNNFISQVLVDELQLSID 339
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
F V +GNG R G C +VK +++ + ADF ++ + D VLG+QWL+ G +
Sbjct: 340 PGTRFGVNIGNGTRCEGRGICKRVKVKLKELTIVADFLAVELGKVDLVLGMQWLDSTGTM 399
Query: 287 ITDHKALTMEFTYKG 301
+LTM F KG
Sbjct: 400 KVHWPSLTMTFWTKG 414
>gi|147852240|emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
Length = 1371
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 148/354 (41%), Gaps = 75/354 (21%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + A L L QT S+++Y F+ + R ++ L F+S L
Sbjct: 145 ALNARFGQHVFBDPIADLRNLRQTGSLQSYMDEFDELYPRA-DIKESHALSFFLSXLIDE 203
Query: 82 IQNELAIHKPSNLRDAIALAKL-------IEDKLQSYNQKSISWKPTN------TPIPTT 128
+Q + + KP L DA +LA+L +++K + ++ + PT TPI +
Sbjct: 204 LQMPVRMFKPQTLADAYSLARLQEIAXAALQNKPKPVSKGPSLYSPTTNHYHKATPITSI 263
Query: 129 TRNETNIRLN--------PLLPLPPPN--PSNPPKI-----------------ALPIC-- 159
++N TN+ LLPLPP P P I A +C
Sbjct: 264 SQNATNLSNTTFPKTTNAGLLPLPPSTNIPKTNPGITTRNHXNFSNRDLDERRAKGLCFW 323
Query: 160 --------------RLTAVEMQTRQE---PSEILQ-------EEEILV--------EDTV 187
+L +++Q + P LQ +E+I + ED+
Sbjct: 324 CDEKFTPGHKCKRKQLYVMQIQVETDGEGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQ 383
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
L+ + L VLID+GS+HN+L ++A + +K V V NG + C
Sbjct: 384 TMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGHELHCTALC 443
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
S ++ MQG F A+ ++L D +LG QWL LG I + L M F G
Sbjct: 444 SDFRWRMQGQEFIAEVYVLPLETYDLILGTQWLATLGDISWNFNTLQMGFELNG 497
>gi|449472371|ref|XP_004153573.1| PREDICTED: uncharacterized protein LOC101213561, partial [Cucumis
sativus]
Length = 764
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 153/371 (41%), Gaps = 81/371 (21%)
Query: 10 YRALEEQAALT------RAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
YRA EE+ T + RF S + ++ Q ++VE Y++ F+ + +
Sbjct: 161 YRAQEERDKFTGWHNLKERLLVRFRSSREGSICGQFLRIKQQTTVEEYRNEFDRLMAPLA 220
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK--------LQSYNQKS 115
+L + + F++GL P I+ E+ KP L + + A+L+E++ L Y +
Sbjct: 221 DLQDRVVEETFMNGLFPWIKAEVVFCKPVGLAEMMHAAQLVENREIIRKEANLNGYAKG- 279
Query: 116 ISWKPTNTPI--PTTTRNETNIRLNPLLPLPP---PNPSNPPKIALPICRLTAVEMQTRQ 170
+ P N+ I + N + + N + P+ + K P RL E Q R+
Sbjct: 280 -KYPPPNSSIIRSSAAMNHSEDKGNTIFPIRTVTLRTTAGEVKKEGPTKRLPDAEFQARK 338
Query: 171 EPS--------------------------------------------------EILQEEE 180
E EI E++
Sbjct: 339 EKGLCFRCNEKYFHGHRCKGREQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQ 398
Query: 181 ILVEDTV--------PKQLSAK--INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMS 230
+VE ++ P + + I ++ + +LID G+THN++ ++ L L + T
Sbjct: 399 AIVELSINSVVGLTNPGTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSH 458
Query: 231 FLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDH 290
+ V +G+G ++ +G C ++ E++G EA+F L+ D VLG+QWL LG D
Sbjct: 459 YGVILGSGAAVKGKGICEGIELELEGWKVEANFLPLELGGVDGVLGMQWLYSLGVTEVDW 518
Query: 291 KALTMEFTYKG 301
K LTM F + G
Sbjct: 519 KNLTMTFLHNG 529
>gi|307136196|gb|ADN34034.1| gypsy/ty3 element polyprotein [Cucumis melo subsp. melo]
Length = 473
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 142/324 (43%), Gaps = 39/324 (12%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
+ R+R+ +E L + +RF Y A + SV Y FE + + +
Sbjct: 152 RKRFRSWKE---LKERMYNRFCNREYGTGCARFLAIKHEGSVGEYLQRFEELSTPLPEMA 208
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ----SYNQKSISWKPT- 121
D ++ F GL P I+ E+ + L D + +A+L E+KL+ S++ + KP
Sbjct: 209 EDVLVGTFTKGLDPVIRTEVFAMRVVGLEDMVDVARLAEEKLEIARASHSPYAKDGKPAQ 268
Query: 122 -----NTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPI------CR-------LTA 163
N+ IP+T + L +P SNP A + C+ L
Sbjct: 269 KHAPKNSEIPSTK----IVTLAERIPTSLNQASNPQNGATGMGGRILNCKHDVKRDELED 324
Query: 164 VEMQTRQEPSEILQEE-------EILVEDTVPK--QLSAKINNKPLSVLIDTGSTHNYLH 214
VEM E+++ +V T P ++ ++ ++ + +++D G+THN++
Sbjct: 325 VEMVDSTHEGEMVEVSPMVELSLNFVVGLTAPGTFKIKGRVEDREIVIMVDCGATHNFIS 384
Query: 215 PRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAV 274
+L L+L + ++ V +G+ + ++ C + + + DF L+ D V
Sbjct: 385 LKLVESLNLPMAAITNYGVIMGSEKAVQGREMCKGITVGLPVITIVEDFLPLELGNLDMV 444
Query: 275 LGVQWLEKLGKIITDHKALTMEFT 298
LG+QWL+K G + D KALTM F
Sbjct: 445 LGMQWLQKQGAMTVDWKALTMNFV 468
>gi|356569674|ref|XP_003553022.1| PREDICTED: uncharacterized protein LOC100788433 [Glycine max]
Length = 1433
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 66/112 (58%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L IN+ ++VLID+GSTHN+L PRLA FLHL T V VGNG + C
Sbjct: 351 RLFGYINHTRITVLIDSGSTHNFLQPRLATFLHLPTVPTNPLRVLVGNGAVLTCTHLCPD 410
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+Q F FH+L S AD +LG+QWL+ LG I TD+ +L M+F + G
Sbjct: 411 TTISLQSHHFTLTFHLLPISGADVILGIQWLKLLGPITTDYTSLIMKFHHLG 462
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%)
Query: 17 AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFIS 76
++ +A+ESRF P+ Y + + LFKLTQT SV Y FE + NR+ L P +L CF+S
Sbjct: 123 SSFLQALESRFAPTYYDDPKGALFKLTQTGSVNDYLIEFERLANRIFGLPPPFLLSCFVS 182
Query: 77 GLKPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
GL P I+ E+ +P + A ALAKL EDKL
Sbjct: 183 GLAPDIRREVLALQPISFPQATALAKLQEDKL 214
>gi|147841216|emb|CAN64356.1| hypothetical protein VITISV_020633 [Vitis vinifera]
Length = 1852
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 86/146 (58%), Gaps = 10/146 (6%)
Query: 165 EMQTRQEPSEILQEEEILVEDTV--------PK--QLSAKINNKPLSVLIDTGSTHNYLH 214
E+Q ++E + I E +E ++ P+ +++A I ++P+ VLID+GSTHN+L
Sbjct: 234 EVQDKEEEAXISDNREDELEVSIHALXGWASPRTMRVAATIKSQPIMVLIDSGSTHNFLS 293
Query: 215 PRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAV 274
++A L L + T SF V V NGER+ +G KV ++QG+ F + L + D V
Sbjct: 294 DKVARTLRLPVVPTKSFTVHVANGERLLCQGRFEKVPIDLQGIPFSLTCYSLPLAGLDMV 353
Query: 275 LGVQWLEKLGKIITDHKALTMEFTYK 300
LG+QWL LG ++ + + LTM+F ++
Sbjct: 354 LGIQWLXMLGSVVCNWQYLTMDFNWE 379
>gi|147775005|emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
Length = 1122
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 69/111 (62%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++AKI + VLID+GSTHN++ ++A LHL++ T F V V NG ++ +G
Sbjct: 2 RITAKIGQHEVVVLIDSGSTHNFISEKVADMLHLSVVPTKPFTVKVANGTPLKCQGRFEH 61
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V +QG+ F + L + D VLGVQWLE+LG ++ + K LTMEF ++
Sbjct: 62 VHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLGTVVCNWKKLTMEFQWE 112
>gi|449449136|ref|XP_004142321.1| PREDICTED: uncharacterized protein LOC101219643 [Cucumis sativus]
Length = 648
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 141/360 (39%), Gaps = 67/360 (18%)
Query: 9 RYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD 68
R + +E L + F + + A L ++ Q S Y F + ++
Sbjct: 138 RRKRVESWEDLKERMFDFFNDTGQQSLGARLIRIKQEGSYSEYVKKFVTYSAPLPDMAES 197
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIED---------------------- 106
+LD F++GL+P++Q E+ P L + + A+L+ D
Sbjct: 198 VLLDAFLTGLEPSLQAEVISRHPQTLEECMKEAQLVNDRNIALKLAMEELDIVEPKRNEN 257
Query: 107 --KLQSYNQKSIS-----------------WKPTNTPIPTTTRNETNIRLNPLLPL---- 143
K Q N+K+ S ++ + PI + E RL+ L
Sbjct: 258 SSKFQGKNEKTESKKTEFVMKQVTIPLKNDYQKKDPPIKRLSDTEFRARLDKGLCFRCNE 317
Query: 144 ---PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEI----------------LVE 184
P K L + L E R+E +E E I L+
Sbjct: 318 KYAPGHRCKGREKRELMLLILNEEEDHKREEDTEDEASEVIELNHLELNMDNPIELRLIT 377
Query: 185 DTVPK---QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERI 241
K +L +N + + +LID+G+T+N++ L L L+I+ F V +GNG +
Sbjct: 378 GVTSKGTMKLKGHVNGREVVILIDSGATNNFISQVLVDELQLSIDPGTRFGVTIGNGNQC 437
Query: 242 RSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
G C +VK +++ + ADF ++ D VLG+QWL+ G + +LTM F KG
Sbjct: 438 EGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHWPSLTMTFWMKG 497
>gi|12322948|gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 131/288 (45%), Gaps = 31/288 (10%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L KL +T + Y FE I R+ NL + ++ +++GL+ Q + + +P +RD
Sbjct: 200 AELKKLQETDGIVEYHQQFELIKVRL-NLSEEYLVSVYLAGLRTDTQMHVRMFEPKTVRD 258
Query: 97 AIALAKLIEDKLQSYNQKSIS--WKPTNTPIPTTTR--NETNIRLNPLLPLPPPNPSNPP 152
+ L K E +++ +K++S W T + R E + + L + P
Sbjct: 259 CLRLGKYYE---RAHPKKTVSSTWSQKGTRSGGSYRPVKEVEQKSDHLGLCYFCDEKFTP 315
Query: 153 KIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQ--------------------LS 192
+ L + M +E + + E+L +D ++ +
Sbjct: 316 EHYLVHKKTQLFRMDVDEEFEDAV---EVLSDDDHEQKPMPQISVNAVSGISGYKTMGVK 372
Query: 193 AKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
++ + L +LID+GSTHN++ +A L +E VAV +G ++ +G +
Sbjct: 373 GTVDKRDLFILIDSGSTHNFIDSTVAAKLGCHVESAGLTKVAVADGRKLNVDGQIKGFTW 432
Query: 253 EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
++Q F++D ++ D VLGVQWLE LG+I + K L M+F YK
Sbjct: 433 KLQSTTFQSDILLIPLQGVDMVLGVQWLETLGRISWEFKKLEMQFFYK 480
>gi|356529593|ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
Length = 572
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 69/111 (62%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI+N L VLID+G++HN++ P++ L L I T++ + +G+G R+ + G C
Sbjct: 402 RVEGKIHNVDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGDGHRLITNGVCKG 461
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V +M G+ D +L+ D VLGV WL LG +I D KA+TM+F+Y+
Sbjct: 462 VNMQMGGIEVIVDALVLELGGMDMVLGVAWLRTLGNVIMDWKAMTMQFSYE 512
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGL 78
L RA+ +R+G N L L Q SVE + FE + ++V L + L F+SGL
Sbjct: 136 LKRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 195
Query: 79 KPTIQNELAIHKPSNLRDAIALAK 102
KP I+ + P N + + +AK
Sbjct: 196 KPQIRRRVRTLNPRNRMEMMRIAK 219
>gi|27764548|gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
A TRA+E FGPS+Y RATLFKL Q+++V Y F + NRV L +AILDCF+SG
Sbjct: 161 AFTRALELDFGPSAYDCPRATLFKLNQSATVNEYYMQFTALVNRVDGLSAEAILDCFVSG 220
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQS 110
L+ I ++ +P L A+ALAKL E+K S
Sbjct: 221 LQEEISRDVKAMEPRTLTKAVALAKLFEEKYTS 253
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+ + ++ + +L+D GS+ N++ PR+A L L +E + V VGNG+ + +EG +
Sbjct: 392 RFTGQVGGIAVKILVDGGSSDNFIQPRVAQVLKLPVEPAPNLRVLVGNGQILSAEGIVQQ 451
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+ +QG + ++L S AD +LG WL LG + D+ ALT++F
Sbjct: 452 LPLHIQGQEVKVPVYLLQISGADVILGSTWLATLGPHVADYAALTLKF 499
>gi|449465222|ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
Length = 2712
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 147/351 (41%), Gaps = 80/351 (22%)
Query: 29 PSSYINHRATLFKL-----TQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQ 83
P S++ F++ + ++VE Y++ F+ + + +L + + F++GL P I+
Sbjct: 1094 PDSWLFRADRYFQIHKLSDAEKTTVEEYRNEFDRLMAPLADLQDRVVEETFMNGLFPWIK 1153
Query: 84 NELAIHKPSNLRDAIALAKLIEDK--------LQSYNQKSISWKPTNTPI--PTTTRNET 133
E+ KP L + + A+L+E++ L Y + + P N+ I + N +
Sbjct: 1154 AEVVFCKPVGLAEMMHAAQLMENREIIRKEANLNGYAKGK--YPPPNSSIIRSSAAMNHS 1211
Query: 134 NIRLNPLLPLPPPN---PSNPPKIALPICRLTAVEMQTRQEPS----------------- 173
+ N + P+ + K P RL E Q ++E
Sbjct: 1212 EDKGNTIFPIRTVTLRTTAGEVKKEGPTKRLPDAEFQAQKEKGLCFRCNEKYFHGHRCKG 1271
Query: 174 ---------------------------------EILQEEEILVEDTV--------PK--Q 190
EI E++ +VE ++ PK +
Sbjct: 1272 REQRELRMYVVKEDEEYEIVEEAEWDETELNCVEINPEDQAIVELSINSVVGLTNPKTMK 1331
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ KI ++ + +LID G+THN++ ++ L L + T + V +G+G ++ +G C +
Sbjct: 1332 VRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGI 1391
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ E++G EA+F L+ D VL +QWL LG D K LTM F + G
Sbjct: 1392 ELELEGWKVEANFLPLELGGVDGVLEMQWLYSLGVTEVDWKNLTMTFLHNG 1442
>gi|449457325|ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
Length = 718
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 138/338 (40%), Gaps = 75/338 (22%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
++ Q ++VE Y++ F+ + + +L + + F++GL P I+ E+ KP L +
Sbjct: 167 GQFLRIKQQTTVEEYRNEFDRLMAPLADLQDRVVEETFMNGLFPWIKAEVVFCKPVGLAE 226
Query: 97 AIALAKLIEDK--------LQSYNQKSISWKPTNTPI--PTTTRNETNIRLNPLLPLPP- 145
+ A+L+E++ L Y + + P N+ I + N + + N + P+
Sbjct: 227 MMHAAQLVENREILRKEANLNGY--ATGKYPPPNSSIIKSSAAMNNSENQGNTIFPMRTV 284
Query: 146 --PNPSNPPKIALPICRLTAVEMQTRQEPS------------------------------ 173
+ K P RL E Q R+E
Sbjct: 285 TLRTTAGEVKKEGPTKRLPDAEFQARKEKGLCFRCNEKYFHGHRCRGREQRELRMYVVKE 344
Query: 174 --------------------EILQEEEILVEDTV--------PKQLSAKINNKPLSVLI- 204
EI E++ +VE ++ P + + K V+I
Sbjct: 345 DEEYEIVEEAEWDETESNCVEINPEDQAIVELSINSVVGLTNPGTMKVRGKIKDREVIIL 404
Query: 205 -DTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D G+THN++ ++ L L + T + V +G+G ++ +G C ++ E++G EA+F
Sbjct: 405 IDCGATHNFISDKVVQELSLPTKTTSHYGVILGSGAAVKGKGICEGIELELEGWKVEANF 464
Query: 264 HILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
L+ D VLG+QWL LG D K LTM F + G
Sbjct: 465 LPLELGGVDGVLGMQWLYSLGVTEVDWKNLTMTFLHNG 502
>gi|147860532|emb|CAN81876.1| hypothetical protein VITISV_034528 [Vitis vinifera]
Length = 1241
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++AKI + VLID+GSTHN++ ++A LHL + T F V V NG ++ +G
Sbjct: 337 RITAKIGQHKVVVLIDSGSTHNFISEKVADMLHLPVVPTKPFTVKVANGTPLKCQGRFEH 396
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V +QG+ F + L + D VLGVQWLE+L ++ + K LTMEF ++
Sbjct: 397 VHVILQGIPFSLTLYSLPLTGLDLVLGVQWLEQLETVVCNWKKLTMEFQWE 447
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 17 AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFIS 76
A + +RFGP+ + L ++ Q S+ YQ FE + NRV A++ F+
Sbjct: 133 ADFEEELWARFGPTECEDFDEALSRVKQMGSLRDYQREFEKLGNRVQGWTQKALVGTFMG 192
Query: 77 GLKPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
GLK I + + + KP +L++AI+LA++ +D+L
Sbjct: 193 GLKSEIADXIRMFKPKSLKEAISLARMRDDQL 224
>gi|170660047|gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 66/112 (58%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L + N+ + +LID+GSTHN+L +A L E + V V +G ++ S C
Sbjct: 13 RLCGTVKNRRIHILIDSGSTHNFLDAAVAAKLGCCAENIPAVNVTVADGNKLISSSTCRA 72
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
K++MQG+ F+A+ +L D VLGVQWL++LG I+ D L MEF ++G
Sbjct: 73 FKWKMQGLEFKANLLLLPLRGCDMVLGVQWLKQLGPILWDFSKLRMEFQFQG 124
>gi|115481476|ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza sativa Japonica Group]
Length = 1476
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 82/337 (24%), Positives = 132/337 (39%), Gaps = 83/337 (24%)
Query: 26 RFGPSSYINHRATLFKLT---QTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
R+GP LF+L+ +TS+VE YQ F+ + R L + F GL P +
Sbjct: 138 RYGPPL---RSVPLFELSACRRTSTVEDYQDRFQALLPRAGRLEEAQQVQLFTGGLLPPL 194
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP 142
++ KP++L +A++LA+ E +P P T+ R +LP
Sbjct: 195 SLQVQQQKPASLEEAMSLARQFE-----------LMEPYLFPATTSARG--------VLP 235
Query: 143 LPPPNPSNPPKI----------ALPICRLTAVEMQTR----------------------- 169
P P PS P + P+ RL+ + + R
Sbjct: 236 TPAPRPSTGPVVKPAPATVTVEGRPVKRLSQAQQEERRRLGLCYNCDEKYSRSHNKVCKR 295
Query: 170 ---------QEPSEILQE--EEILVEDTV-------------PKQLSAKINNKPLSVLID 205
+E + +++ EE VE V P L + L L+D
Sbjct: 296 LFFVEGGAIEEGDDTVEDDTEEATVEAPVFSLHAVAGIPLGKPILLQVTLGAASLVALVD 355
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
TGSTHN++ A L ++ V NGE++ G + +QG+ F+ D ++
Sbjct: 356 TGSTHNFIGEDAALRTGLPVQPRPRLTATVANGEKVSCPGVLRRAPITIQGMAFDVDLYV 415
Query: 266 LDFSRADAVLGVQWLEKLGKIIT-DHKALTMEFTYKG 301
+ + D VLG QW+ LG I D T+ F ++G
Sbjct: 416 MPLAGYDMVLGTQWMAHLGTTIAWDVTTGTVSFQHQG 452
>gi|9294238|dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
Length = 904
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 44/306 (14%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L KL +T V Y FE I RV NL + ++ +++GL+ Q + + +P +R
Sbjct: 42 AELKKLQETDGVVDYHQKFELIKIRV-NLSEEYLVSVYLAGLRVDTQMLVRMFQPQTVRQ 100
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTR------NETNIRLNPLLPLPPPNPSN 150
LA+L E K Q S W P T+ ++ N + PPN
Sbjct: 101 CFRLARLYE-KAQFKKPYSAHWTPKTGGATLNTKPMREPESQAGHYTNKTVSKQPPNTKK 159
Query: 151 PPK-----------------------IALPICRLTAVEMQTRQEPS-------------E 174
+ I +L +++ E + +
Sbjct: 160 LSQQEMSESELWDFAIFVMKSTLWSTIWFTRTQLFCMDVDDEFEDASEELLNEDEENMPQ 219
Query: 175 ILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVA 234
I + D ++ +NK L +LID+GST N++ +A L +E T V+
Sbjct: 220 IFVNAVSGISDYTTMRVKGMYDNKILFILIDSGSTFNFIDSTMAKKLGCKVEPTGLTRVS 279
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
V +G ++R +G + +++Q F +D ++ D VLGVQWL LG+I + +
Sbjct: 280 VADGRKLRVDGKITDFTWKLQTTSFASDILMIPLQVIDMVLGVQWLATLGRISWEFQKFE 339
Query: 295 MEFTYK 300
M F YK
Sbjct: 340 MRFKYK 345
>gi|356574444|ref|XP_003555357.1| PREDICTED: uncharacterized protein LOC100813803 [Glycine max]
Length = 2140
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L IN +++L+D+GSTHN++ PR+A FL+L + T V VGNG + +
Sbjct: 222 RLYGLINKTRVTILVDSGSTHNFVQPRVAKFLNLPLHDTQPLRVMVGNGSVLDCQQMIPD 281
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+Q F +L S AD VLGV+WL LG +ITD+ TM+FT G
Sbjct: 282 TTILIQEHRFVVTLRLLPLSGADVVLGVEWLRTLGPVITDYTDFTMKFTLFG 333
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 51 YQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQS 110
Y + FE + NR+T L P +L CFISGL P I+ E+ +PS+L A ALA+L EDK+
Sbjct: 33 YLTEFEKLANRITGLSPSVLLSCFISGLSPEIRREVQAFQPSSLPKATALARLQEDKIN- 91
Query: 111 YNQKSISWKPTN-TPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTR 169
+++ + P N +P TT N P S P+ P + T +M R
Sbjct: 92 -DRRKHTRIPFNHSPTNTTPSN--------------PQSSQQPRPKAPFVQRTQEDMAYR 136
Query: 170 QE 171
+E
Sbjct: 137 RE 138
>gi|323134589|gb|ADX31265.1| unknown [Triticum aestivum]
Length = 1231
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 147/353 (41%), Gaps = 68/353 (19%)
Query: 17 AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP--DAILDC- 73
A+L A+ +FG Y +H L Q+ +V Y + FE + + + +P D++
Sbjct: 219 ASLCEALCHKFGREQYQSHLRQFNTLRQSGTVADYMTRFEELMHHILAHNPAFDSVYFTT 278
Query: 74 -FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNE 132
F+ GLK I+ + +H+P +L A +LA L E+ +++ ++ + R
Sbjct: 279 QFLDGLKGEIRAVVMLHQPKDLDSAFSLATLQEELMEALPRREYKRQDAANQRSPAQRPL 338
Query: 133 TNIRLNPL---LPLPPP--------NPSNPP------------------KIALPICRLTA 163
I P+ LP PPP + +NPP + A +C
Sbjct: 339 LAIGAPPVRQVLPGPPPAAEDRRAIDAANPPDRRDQGRGDDRVAALRNYRRARGLCFKCG 398
Query: 164 ------------VEMQTRQEPSEILQ-------------EEEILV--------EDTVPK- 189
V++ +E E+LQ +E++L+ T P+
Sbjct: 399 ERWGQGHQCGPTVQLHVVEELLELLQADQGVPVVPDPDSDEDVLMCISKGATTGQTTPRT 458
Query: 190 -QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS 248
+L +I + + +L+D+GS+H++L + L L I+ + V + +G + G
Sbjct: 459 VRLLGQIGGQEMLILVDSGSSHSFLSDTVVARLQLPIQAMSTVAVKIADGGTLSCSGVVP 518
Query: 249 KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +++ QG F D +L D ++G+ WLE G + D A + F + G
Sbjct: 519 ECRWKTQGHEFVTDLRVLALGCYDMIVGMDWLESCGPMWIDWSAKQLIFNHGG 571
>gi|449524806|ref|XP_004169412.1| PREDICTED: uncharacterized protein LOC101228221 [Cucumis sativus]
Length = 703
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 146/353 (41%), Gaps = 64/353 (18%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
+D +T+ + EE L A RF PS + A L KL Q ++V Y+ E +
Sbjct: 80 KDDRTKINSWEEFRQLLWA---RFKPSGQGDKHARLMKLQQETTVREYRRRVEQFSASLK 136
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNT 123
++ A+ F+ GL+ IQ+E+ P L + +A++IED Q K I N
Sbjct: 137 DMSDAALESKFVCGLREEIQSEIRKLNPVGLEAKMLMAQVIEDD-QVVQLKRIHGVGANP 195
Query: 124 PI--------PTTTRNETNIRLNPLLPLPPP----------------------NPSNPPK 153
+ P + N+T ++ + N N
Sbjct: 196 SLLNKTSGNGPNGSGNQTGSKVMDRVATSRTITINPSRNSSSSSTTITSPHDFNAKNS-- 253
Query: 154 IALPICRLTAVEMQTRQEPS----------EILQEEE----------------ILVEDTV 187
+A P R+T EM+ ++E ++ +E E LV +
Sbjct: 254 MAQPYRRMTDSEMRMKKEKGLWEDLSGEIDKVAEETEDENEQINTEIANLSLHSLVGFSS 313
Query: 188 PK--QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEG 245
PK ++ +I N + VL+D G+ HN++ + L + +E ++ V +G G +R+ G
Sbjct: 314 PKTIKIKGEIRNCEVVVLVDGGAIHNFISEEVVKELKIPVETLDAYGVVLGTGGVVRATG 373
Query: 246 HCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
C V + + DF L AD LGV WLE LGK+I ++K MEF+
Sbjct: 374 MCKSVNLTIVNLSITHDFLPLPLGSADVNLGVTWLETLGKVIFNYKLSEMEFS 426
>gi|449470598|ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 1049
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 74/332 (22%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S Y F N + ++ + D F++GL+P +Q E+ P L +
Sbjct: 149 ARLIRIEQDGSYNDYVKKFVNYSAPLPHMTESVLRDAFLTGLEPNLQAEVVSRNPLTLEE 208
Query: 97 AIALAKLI------------EDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLP 144
+ A+L+ E ++Y + S TN + T PL +
Sbjct: 209 CMREAQLVNDRNLALQWSKAEGGGRNYKKGEGS---TNKGPEGGEKGITRKTEFPLKQVT 265
Query: 145 PPNPSNPPKIALPICRLTAVEMQ------------------------------------- 167
P N K P+ RL+ E +
Sbjct: 266 IPIKGNYQKSEPPVKRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMNEE 325
Query: 168 --------TRQEPSEILQEEEILVEDTVPKQLSA--------------KINNKPLSVLID 205
T + E+L+ ++ +E+ +L A +I K + +LID
Sbjct: 326 ESLEDEDRTEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILID 385
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+THN++H ++ + L +E F V +G+G R + G C++++ +++ + ADF
Sbjct: 386 SGATHNFIHNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLA 445
Query: 266 LDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
++ D +LG+QWL G + +LTM F
Sbjct: 446 IELGSVDVILGMQWLNTTGTMKIHWPSLTMTF 477
>gi|449473450|ref|XP_004153884.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 564
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 79/334 (23%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S + F + ++ +LD F++GL+P +Q E+ P L +
Sbjct: 15 ARLIRIEQDGSYNDHVKKFVQYSAPLLHMAESVLLDAFVTGLEPALQAEVISRHPQTLEE 74
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLN--------------PLLP 142
+ A+L+ + + W + + TR PL
Sbjct: 75 CMKEAQLVSGRNLALKLAKAEW------VNSVTREGGGSSKGQSSQDKSSPKKTEFPLKQ 128
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPS----------------------------- 173
+ P N K P+ RL+ E + R +
Sbjct: 129 VTIPIKGNYQKSEPPVKRLSDAEFRARLDKGLCFKCNERYSPGHRCKMKDKRELMLFIMN 188
Query: 174 ----------------EILQEEEILVEDTVPKQLSA--------------KINNKPLSVL 203
E+L+ ++ +E+ +L A +I K + +L
Sbjct: 189 EEESLEDEDRTEETNEEVLELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLIL 248
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
ID+G+THN++H ++ + L +E F V +G+G R + G C++++ +++ + ADF
Sbjct: 249 IDSGATHNFIHNKIVEEVGLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADF 308
Query: 264 HILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
++ D +LG+QWL G + +LTM F
Sbjct: 309 LAIELGSVDVILGMQWLNTTGTMKIHWPSLTMTF 342
>gi|227438239|gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2726
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L KI + V++D+G++HN++ P + L L + SF + +GNG + S G C +
Sbjct: 1587 KLYGKIQKTDVIVMLDSGASHNFITPSIVTKLKLKVCAETSFDILLGNGASVNSLGVCRE 1646
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
V F++ F +DF L+ D +LG+QWLE LG+ D K + F + G
Sbjct: 1647 VSFQLADATFTSDFIALELGMVDVILGIQWLETLGRCEVDWKEQELSFIHGG 1698
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 10 YRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA 69
+R +E+ L RF S LF + QT SV Y S FE + V L +
Sbjct: 1338 WREFKEKLVL------RFAESIEEEPEIRLFSIKQTGSVSDYISEFEELSGLVKGLDDNL 1391
Query: 70 ILDCFISGLKPTIQNELAIHKPSNLRDAIA 99
++ F +GL ++ + I +P L + IA
Sbjct: 1392 LIKIFYTGLNQEMKEVIRIKEPVGLENHIA 1421
>gi|242093834|ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
gi|241915630|gb|EER88774.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
Length = 1609
Score = 84.3 bits (207), Expect = 6e-14, Method: Composition-based stats.
Identities = 85/334 (25%), Positives = 131/334 (39%), Gaps = 73/334 (21%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RFGP NH + L +L TS+V+AY F+ L P F GL I+ +
Sbjct: 302 RFGPPLSTNHLSDLARLPFTSTVDAYMEAFQARAAHAGRLSPGQKAKLFTGGLPHHIRVD 361
Query: 86 LAIHKPSNLRDAIALAKLIEDK------LQSYNQKSISWKPTNTPIPTTTRNETNIRLNP 139
+ +H P +L+ A+ LA+ E + + T+TP T+ E++
Sbjct: 362 VELHDPQDLQRAMYLARAYERRNTPAPLALPAPPRRRPTSTTSTPAGAVTQAESSSS--- 418
Query: 140 LLPLPPPNPSNPPKIALPICRLTAVEMQTRQ---------EPSE---------ILQEEEI 181
S PP++ RLT EM R+ EP L+ +
Sbjct: 419 ---------SAPPRL---FKRLTPDEMAERRKQGLCYNCDEPYVRGHKCARLFFLEVTDY 466
Query: 182 LVED--------TVPKQLSAKINNKP--------------------------LSVLIDTG 207
+VE+ T P + + +KP L+ L+D+G
Sbjct: 467 IVEEPEDTDSGSTQPAEDAPYDTDKPLISLSAITGIRAHETMQLRVHVGPHELTALLDSG 526
Query: 208 STHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILD 267
STHN++ AH L + + V V NG+R+ G V ++ F+ D + +
Sbjct: 527 STHNFISSAAAHRAGLHFKDSEGAHVTVANGDRVLCRGLARGVNLQIGMEVFKVDCYAIP 586
Query: 268 FSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
D VLG+ WL LG I+ D L MEF+ G
Sbjct: 587 LDSCDMVLGIAWLRTLGPILWDFDNLRMEFSLHG 620
>gi|147802690|emb|CAN72998.1| hypothetical protein VITISV_043958 [Vitis vinifera]
Length = 1078
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+SAK+ L VLID+GSTHN+++ R+ L L + T F V V NG+ ++ +G V
Sbjct: 267 VSAKVGPHELIVLIDSGSTHNFINERIVELLQLPMVPTEPFNVKVANGDPLKCQGRFENV 326
Query: 251 KFEMQGVGFE-ADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+QG+ F + + L D VLGV LE+LG ++ D K +TMEF++K
Sbjct: 327 SVLLQGIPFTLSTLYSLPLIGLDMVLGVHXLEQLGTVVCDXKIMTMEFSWK 377
>gi|449501536|ref|XP_004161395.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 740
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 64/108 (59%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L +I + + VLID+G+THN++H ++ + + E +F +G+G + G C +
Sbjct: 335 KLRGEIEGREVVVLIDSGATHNFVHYKIIEEMKIPSEADTTFAATIGDGTCCKGRGLCKR 394
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
++ ++QG+ ADF +++ DA+LG+QWL+ G + +LTM F
Sbjct: 395 LEVKLQGITVVADFLLIELGNVDAILGMQWLDTTGTMKIHWPSLTMSF 442
>gi|147854459|emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 54/312 (17%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
+ Q +V AY FE + + + + + F++GL P I+ E + +P L +
Sbjct: 855 FLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEIRAEQRLLQPYGLGHLM 914
Query: 99 ALAKLIEDKLQSYNQKSISWKPTNTP-IPTTTRNETNIRLN-PLLPLPPPNPSNPPKIAL 156
+A+ +ED+ + P +T + T R E I N + + + +
Sbjct: 915 EMAQRVEDRNLAMRAAREPNGPKSTKMLSTANRGEWKIGENFQTRAVAVGEKTMSQRREI 974
Query: 157 PICRLTAVEMQTRQEPSEILQEEE--------------ILVED----------------- 185
PI RLT E+Q R+E + EE +LV +
Sbjct: 975 PIKRLTESELQARREKGLWFKCEEKFSPGHRCKKELRVLLVHEDEEEDDNQFDDRATEEP 1034
Query: 186 -------------------TVPKQLSAK--INNKPLSVLIDTGSTHNYLHPRLAHFLHLA 224
T P + K I +K + +L+D+G+THN+L L L L
Sbjct: 1035 ALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLP 1094
Query: 225 IEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
+ T S+ V +G G ++ +G C V MQG+ DF L+ D +LG+ WL LG
Sbjct: 1095 LTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLG 1154
Query: 285 KIITDHKALTME 296
+ + K LTM+
Sbjct: 1155 DVKVNWKMLTMK 1166
>gi|449470602|ref|XP_004153005.1| PREDICTED: uncharacterized protein LOC101220479 [Cucumis sativus]
Length = 583
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L +N + + +LID+G+T+N++ L L L+I+ F V +GNG + G C +
Sbjct: 351 KLKGHVNGREVVILIDSGATNNFISQVLVDELQLSIDPGTRFGVTIGNGNQCEGSGICKR 410
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
VK +++ + ADF ++ D VLG+QWL+ G + +LTM F KG
Sbjct: 411 VKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHWPSLTMTFWMKG 462
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%)
Query: 9 RYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD 68
R + +E L + F + + A L ++ Q S Y F + ++
Sbjct: 138 RRKRVESWEDLKERMFDFFNDTGQQSLGARLIRIKQEVSYSEYVKKFVTYSAPLPDMAES 197
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+LD F++GL+P++Q E+ P L + I A+L+ D+
Sbjct: 198 VLLDAFLTGLEPSLQAEVISRHPQTLEECIKEAQLVNDR 236
>gi|449526327|ref|XP_004170165.1| PREDICTED: uncharacterized protein LOC101232744 [Cucumis sativus]
Length = 426
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I K + VL+D G+THN++ +L LH+ + T ++ +G+G I+ +G C +
Sbjct: 155 KIRGVIEGKEVIVLVDCGATHNFISDKLVMTLHIPTKDTSNYGEILGSGTTIKGKGVCEQ 214
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
VK + G ADF L+ D +LG+QWL LG D K L M F +
Sbjct: 215 VKLSLNGWTVTADFLPLELGGVDMILGMQWLYSLGVTEVDWKNLVMSFVH 264
>gi|18425247|gb|AAL69425.1|AC098565_7 Putative polyprotein [Oryza sativa]
gi|31430198|gb|AAP52144.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 848
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 38/297 (12%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
L L +T +V+ Y ++F + R L + + F +GL ++ ++A+ +PS+L D I
Sbjct: 162 LTTLWRTGTVDDYINSFLALACRDAKLSENQQVQLFTAGLVNPLKTDVALCRPSSLDDTI 221
Query: 99 ALAKLIEDKLQSYNQKSISWKPTNTPIPT------------------TTRNETNIRLNPL 140
LA+ E ++Q + + TP P+ + + PL
Sbjct: 222 MLARAYEQRVQLGTTDPVPARSGRTPRPSLPALPAPVSAASAASTAPDAASSASTSKQPL 281
Query: 141 LPLPPPNPSNPPKIAL----PIC-----RLTAVEMQTRQEPSE---ILQEEEI----LVE 184
+ P +P ++A +C + +A + + R+ P+ L E I L
Sbjct: 282 VSALPRKRLSPAEMAQRRSEGLCYNCDEKSSASQRKLRRTPTAHALTLDEPSISLHALAG 341
Query: 185 DTVPK----QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER 240
P ++ A+I L L+D+GSTHN++ A + +E VAV NG+R
Sbjct: 342 VRTPTFNTIKVQARIGATDLVALLDSGSTHNFISDVAARRARVPLEPRHGLSVAVANGDR 401
Query: 241 IRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
I S G + + F DF+ L D VLG QWL LG + D ++ F
Sbjct: 402 ITSPGCFPSQRVTIGDHTFVIDFYALPLGGYDVVLGAQWLGSLGPTLWDFAKQSLAF 458
>gi|356573714|ref|XP_003555002.1| PREDICTED: uncharacterized protein LOC100810380 [Glycine max]
Length = 1273
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+ A IN P+ VL+D GS+ N+L PR+A F L IE + F V V NG + G +
Sbjct: 316 RFVAHINTLPVKVLVDNGSSDNFLQPRVAKFFKLPIEPSPLFKVMVDNGNYMTPIGMIRE 375
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ + QG F+ +L S AD +LG WL+ LG I D+ +L ++F + G
Sbjct: 376 LSIQAQGNRFQLPVFLLPISGADLILGAIWLKTLGSHIADYDSLQIKFLHDG 427
>gi|147802351|emb|CAN77123.1| hypothetical protein VITISV_013625 [Vitis vinifera]
Length = 439
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 97/230 (42%), Gaps = 58/230 (25%)
Query: 74 FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTP--IPTTTRN 131
FI+ L I ++ I +P L AI +A+LIE ++++ K T TP IP TT
Sbjct: 214 FIARLCDDICLDVKIKQPRTLVAAIGVARLIE-------ERNLLQKKTTTPSRIPMTTTL 266
Query: 132 ETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQL 191
+ N NPP + ++
Sbjct: 267 Q--------------NGPNPPTL-----------------------------------RV 277
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVK 251
++ NK L+VLID +THN++ + L + + V V N E I G +
Sbjct: 278 LGRLKNKYLTVLIDDNNTHNFIDQIVVSRFGLLVVREKKIQVVVANQEWIECMGQFLGLT 337
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+Q + AD++IL + VLGVQWLE LG I +D+KALTM F G
Sbjct: 338 LIIQEIPVTADYYILPMAACQVVLGVQWLETLGSIESDYKALTMSFKLGG 387
>gi|224143665|ref|XP_002336067.1| predicted protein [Populus trichocarpa]
gi|222869875|gb|EEF07006.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 13 LEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILD 72
L + + +A+E RFGP+ Y + L KL QTS+V AYQS FEN+ R+ L +
Sbjct: 141 LNDWVSFIQALEKRFGPTEYEDPEGELSKLRQTSTVAAYQSQFENLAQRIDGLLDRFLTR 200
Query: 73 CFISGLKPTIQNELAIHKPSNLRDAIALAKLIE 105
FISGLK I+ + +P++L+DAI LA+L E
Sbjct: 201 TFISGLKDDIKTNVNSFRPTSLKDAIGLARLQE 233
>gi|218197921|gb|EEC80348.1| hypothetical protein OsI_22431 [Oryza sativa Indica Group]
Length = 402
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 119/279 (42%), Gaps = 53/279 (18%)
Query: 71 LDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQS----------YNQKSI-SWK 119
++ +GL + ++ + P++L+ A++LA+ E +L+ Q+S+ S++
Sbjct: 4 VNLLTTGLGKPLSIDVELQNPADLQAAMSLARSYEQRLEDDAVAAPRIVENKQRSVLSFR 63
Query: 120 PTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEIL--- 176
P+P +R +++ + + + +P+ P RL+A EM +E
Sbjct: 64 SAPAPVPAPSRVGSSMSSSAAI-VASKSPTRPGTTGTRFRRLSAAEMAECREKGLCFNCP 122
Query: 177 ------------------------QEEEILVEDTVP--------------KQLSAKINNK 198
++++ + +DTV +L+ I
Sbjct: 123 EKFSKDHHRQCSMKGIYLLEMDEGEDDDSINDDTVTISLHALTGIRTSKTMRLAVIIGGV 182
Query: 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVG 258
+S L+D+GSTH ++ A L L+ V V NG+++ S G CS + ++
Sbjct: 183 TMSALVDSGSTHTFVATEAARRLGLSPTTKSGLNVMVANGDQVTSSGICSGIPIKIDSED 242
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
F D +++ D VLGVQWL LG I+ D LTM F
Sbjct: 243 FIIDCYVIPLEGYDVVLGVQWLRTLGPILWDFDKLTMSF 281
>gi|108864287|gb|ABA92869.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 413
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTM-SFLVAVGNGERIRSEGHCS 248
+L +I + + L+D+GSTHN++H LA L L + V V NG+R+ S G C+
Sbjct: 223 RLPVEIAGERVVALVDSGSTHNFIHTELARHLCLHLSPVRHDLYVVVANGDRLVSPGRCA 282
Query: 249 KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
++ ++G F D LD S D +LG +WL LG I+ D + + M
Sbjct: 283 NLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDFRNMRM 329
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQ 83
++FGP + N L +L+QTSSV AYQ+ F + +R T L + F +GL+ +
Sbjct: 26 AQFGPPIHRNSLGELKRLSQTSSVAAYQTKFLALASRTTEPLMDSQQIQLFTAGLREELA 85
Query: 84 NELAIHKPSNLRDAIALAKLIEDK 107
++ +H+P +L++A+ LA+ E K
Sbjct: 86 IDVELHQPDDLQEAMGLARAYERK 109
>gi|225016150|gb|ACN78974.1| retrotransposon protein [Glycine max]
gi|225016158|gb|ACN78981.1| retrotransposon protein [Glycine max]
Length = 1261
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 138 NPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQE------------------PSEIL--- 176
P+ L P+P+ P +P L+ E+ R+E PS L
Sbjct: 344 KPVESLLTPSPTKPATTTIPFKCLSPEELAIRREKGLCFNYDEKYSRGHKCTPSLFLFVT 403
Query: 177 QEEEILVED----TVPKQLSAKINNKP----LSVLIDTGSTHNYLHPRLAHFLHLAIEKT 228
++EE L + + P L A P L L G+ +L P + T
Sbjct: 404 EDEECLQDSDSNPSSPTALVASQETSPAQISLHALSGHGAPETFLQP----------QTT 453
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIIT 288
+ V VGNGE ++ C +V +Q F DFHIL AD VLGVQWL+ LG ++T
Sbjct: 454 STLRVTVGNGEELQCNQVCPEVAVHIQAHTFLVDFHILPICGADVVLGVQWLKSLGPVLT 513
Query: 289 DHKALTMEFTY 299
D+ LTM+F Y
Sbjct: 514 DYATLTMKFIY 524
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%)
Query: 13 LEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILD 72
L + AI +RF S+Y + L KLTQ S V AY S FE + NR+ L +L
Sbjct: 119 LSSWSTFLHAIHARFLSSTYEDPTGLLCKLTQRSIVSAYLSEFEALANRIIGLLAPFVLS 178
Query: 73 CFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
CF+SGL P IQ E+ + +P +L AI+ A+L E+++ +++S
Sbjct: 179 CFVSGLNPVIQREVQVMQPHSLVQAISFARLHEERMLIRKMRALS 223
>gi|12322008|gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana]
gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ + K + +LID+GSTHN+L P A L ++ V+V +G ++R EG +
Sbjct: 391 RVKGTYDKKIIFILIDSGSTHNFLDPNTAAKLGCKVDTAGLTRVSVADGRKLRVEGKVTD 450
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
+++Q F++D ++ D VLGVQWLE LG+I + K L M F +
Sbjct: 451 FSWKLQTTTFQSDILLIPLQGIDMVLGVQWLETLGRISWEFKKLEMRFKF 500
>gi|307136175|gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1185
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 63/111 (56%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ K+ ++ + V+ID G+THN++ RL + +A +T + V +G+G+ ++ +G C+
Sbjct: 371 KIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGVIMGSGKAVQGKGMCTG 430
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V + G+ DF L+ D VLG+QWL K G + D + L M F +
Sbjct: 431 VVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAMTVDWRNLAMTFAVR 481
>gi|62734405|gb|AAX96514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 575
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTM-SFLVAVGNGERIRSEGHCS 248
+L +I + + L+D+GSTHN++H LA L L + V V NG+R+ S G C+
Sbjct: 385 RLPVEIAGERVVALVDSGSTHNFIHTELARHLCLHLSPVRHDLYVVVANGDRLVSPGRCA 444
Query: 249 KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
++ ++G F D LD S D +LG +WL LG I+ D + + M
Sbjct: 445 NLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDFRNMRM 491
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 27 FGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQNE 85
FGP + N L +L+QTSSV AYQ+ F + +R T L + F +GL+ + +
Sbjct: 190 FGPPIHRNSLGELKRLSQTSSVAAYQTKFLALASRTTEPLMDSQQIQLFTAGLREELAID 249
Query: 86 LAIHKPSNLRDAIALAKLIEDK 107
+ +H+P +L++A+ LA+ E K
Sbjct: 250 VELHQPDDLQEAMGLARAYERK 271
>gi|12324281|gb|AAG52110.1|AC023064_3 hypothetical protein; 60873-62443 [Arabidopsis thaliana]
Length = 508
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 42/300 (14%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
L +L +T ++ Y + FE I +RV NL +++++ ++ GL+ Q + + +P ++ +
Sbjct: 159 LNQLQETDGIDEYHARFELISSRV-NLSEESLVNAYLKGLQLDTQINVRMFQPHSIHQCL 217
Query: 99 ALAKLIED---KLQSYNQKSIS-WKPTNTPIPTTTRNETNIRLNPLLPLP---PPNPSNP 151
L + E K S N ++ W N+ ++ N +L P +P+
Sbjct: 218 MLGRGYEKAHPKKNSLNNCCVAKWSENNSQSKGILSSKPEHVHNTVLLTSMERPKDPTTQ 277
Query: 152 PKIALPI----------C----------RLTAVEMQTRQEPSEI----LQEEEIL----- 182
P L I C R A E + E + L++ I+
Sbjct: 278 PHKVLSIEDRSKNNQKLCYFGDEKYKETRFEAEEDSGKMEEVHMEKVELEKTGIVAHISV 337
Query: 183 -----VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
V D ++ + LS+LID STH+++ ++A L ++ V+V +
Sbjct: 338 NAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKLKCVLKPASMAQVSVAD 397
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
G + K ++E++G +AD ++ D VLG QWLE LG I D K M+F
Sbjct: 398 GRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLETLGPITCDFKKSVMQF 457
>gi|124359710|gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
finger, CCHC-type; Peptidase aspartic, active site;
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 1297
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 160 RLTAVEMQTRQE-PSEILQEEEILVEDTVPK--QLSAKINNKPLSVLIDTGSTHNYLHPR 216
+L AVE+ +E E+ E + + P+ +L I P+ VL+D+G+THN++ +
Sbjct: 147 KLLAVEVDDEEEGDGEMCMMEFFHLGHSRPQSIKLMGVIKEVPVVVLVDSGATHNFISQQ 206
Query: 217 LAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLG 276
L H ++ A+ T + +G+G +++G C ++ ++ V E D + D D VLG
Sbjct: 207 LVHKMNWAVVDTPCMSIKLGDGSYSKTKGTCEGLEVDVGDVHLEIDAQLFDLGGVDMVLG 266
Query: 277 VQWLEKLGKIITDHKALTMEFTY 299
++WL LG +I + TM F +
Sbjct: 267 IEWLRTLGDMIVNWNKQTMSFWH 289
>gi|449526146|ref|XP_004170075.1| PREDICTED: uncharacterized protein LOC101232562, partial [Cucumis
sativus]
Length = 497
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 173 SEILQEEEILVEDTV----------PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
+E++QEE+ +VE ++ ++ K+ K + VL+D G+THN++ L L
Sbjct: 35 AEVIQEEQTVVELSINSVVRLSNPGTMKVKGKLLGKEIIVLVDCGATHNFISESLVEELQ 94
Query: 223 LAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
++ + T +F V +G+G I+ +G C ++ + DF L+ DA+LG+QWL
Sbjct: 95 ISTKSTTNFGVILGSGTAIKGKGVCEAIEMIIGEWRVIDDFLPLELGSVDAILGMQWLYS 154
Query: 283 LGKIITDHKALTMEFTYKG 301
LG D K L + FT+ G
Sbjct: 155 LGITEVDWKNLILTFTHHG 173
>gi|387965727|gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 168 TRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK 227
T + P E+ I + + +LS I+N + V+ID G+THN+L + L + + +
Sbjct: 462 TEEIPPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTE 521
Query: 228 TMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
+ F V++G+G+ +R G C V + G+ DF L +D +LGVQWLE LG +
Sbjct: 522 SEEFGVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTV 581
Query: 287 ITDHKALTMEFTYKG 301
+++ K M F G
Sbjct: 582 VSNWKTQKMSFQLGG 596
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
+ + R ++ + ++F P + + TQT+SV Y+ F + +
Sbjct: 227 ENKRRPFRNWESMKSFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIP 286
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ ++ FI GL P +Q+E+ + P NL A+ LA +E++
Sbjct: 287 EEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEER 327
>gi|359496850|ref|XP_003635354.1| PREDICTED: uncharacterized protein LOC100854728 [Vitis vinifera]
Length = 2807
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 13 LEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILD 72
L A +++ RFG S Y +H+ L KLTQTS+V +QS FE++ N+VT + ++
Sbjct: 316 LSSWKAFLLSLKHRFGASLYEDHQGNLSKLTQTSTVAEFQSAFEDLMNKVTGISEPLLIS 375
Query: 73 CFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
FI+GLK I+ EL +PS L +A ALA+ E +
Sbjct: 376 FFITGLKSDIRRELLFSRPSTLMEAFALARAYETR 410
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 265 ILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
IL D VLG+QWL++LG++ D+ AL+MEF ++G
Sbjct: 414 ILPIEGPDVVLGIQWLQQLGRVAHDYAALSMEFCWEG 450
>gi|208609065|dbj|BAG72154.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N+ + +LID G+T N++ L L + + T ++V VGNG + R+ G C
Sbjct: 426 KVKGKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKN 485
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+K E+QG+ F IL + VLG+ WL LG I + + L +++ +G
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANFQELIIQWVSQG 537
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
QT RA E +A+ RF P+ N L + Q SV Y+ FE + + N
Sbjct: 161 QTLERAWE---PFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNAD 217
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ + F++GL+ I+ E+ ++ +L + + A L+E+K
Sbjct: 218 REVLKGVFLNGLQEEIKAEMKLYPADDLAELMDRALLLEEK 258
>gi|208609055|dbj|BAG72150.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N+ + +LID G+T N++ L L + + T ++V VGNG + R+ G C
Sbjct: 426 KVKGKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKN 485
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+K E+QG+ F IL + VLG+ WL LG I + + L +++ +G
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANFQELIIQWVSQG 537
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
QT RA E +A+ RF P+ N L + Q SV Y+ FE + + N
Sbjct: 161 QTLERAWE---PFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNAD 217
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ + F++GL+ I+ E+ ++ +L + + A L+E+K
Sbjct: 218 REVLKGVFLNGLQEEIKAEMKLYPADDLAELMDRALLLEEK 258
>gi|208609057|dbj|BAG72151.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N+ + +LID G+T N++ L L + + T ++V VGNG + R+ G C
Sbjct: 426 KVKGKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKN 485
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+K E+QG+ F IL + VLG+ WL LG I + + L +++ +G
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANFQELIIQWVSQG 537
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
QT RA E +A+ RF P+ N L + Q SV Y+ FE + + N
Sbjct: 161 QTLERAWE---PFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNAD 217
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ + F++GL+ I+ E+ ++ +L + + A L+E+K
Sbjct: 218 REVLKGVFLNGLQEEIKAEMKLYPADDLAELMDRALLLEEK 258
>gi|208609051|dbj|BAG72148.1| hypothetical protein [Lotus japonicus]
gi|208609062|dbj|BAG72153.1| hypothetical protein [Lotus japonicus]
Length = 1558
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N+ + +LID G+T N++ L L + + T ++V VGNG + R+ G C
Sbjct: 426 KVKGKIGNREVLILIDCGATSNFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKN 485
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+K E+QG+ F IL + VLG+ WL LG I + + L +++ +G
Sbjct: 486 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANFQELIIQWVSQG 537
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
QT RA E +A+ RF P+ N L + Q SV Y+ FE + + N
Sbjct: 161 QTLERAWE---PFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNAD 217
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ + F++GL+ I+ E+ ++ +L + + A L+E+K
Sbjct: 218 REVLKGVFLNGLQEEIKAEMKLYPADDLAELMDRALLLEEK 258
>gi|12322951|gb|AAG51467.1|AC069160_13 hypothetical protein, 5' partial [Arabidopsis thaliana]
Length = 368
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 127/300 (42%), Gaps = 42/300 (14%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
L +L +T ++ Y + FE I +RV NL +++++ ++ GL+ Q + + +P ++ +
Sbjct: 19 LNQLQETDGIDEYHARFELISSRV-NLSEESLVNAYLKGLQLDTQINVRMFQPHSIHQCL 77
Query: 99 ALAKLIED---KLQSYNQKSIS-WKPTNTPIPTTTRNETNIRLNPLLPLP---PPNPSNP 151
L + E K S N ++ W N+ ++ N +L P +P+
Sbjct: 78 MLGRGYEKAHPKKNSLNNCCVAKWSENNSQSKGILSSKPEHVHNTVLLTSMERPKDPTTQ 137
Query: 152 PKIALPI----------C----------RLTAVEMQTRQEPSEI----LQEEEIL----- 182
P L I C R A E + E + L++ I+
Sbjct: 138 PHKVLSIEDRSKNNQKLCYFGDEKYKETRFEAEEDSGKMEEVHMEKVELEKTGIVAHISV 197
Query: 183 -----VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
V D ++ + LS+LID STH+++ ++A L ++ V+V +
Sbjct: 198 NAISGVSDYRTMRVKGLYEKQVLSILIDPDSTHSFMDSKVAEKLKCVLKPASMAQVSVAD 257
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
G + K ++E++G +AD ++ D VLG QWLE LG I D K M+F
Sbjct: 258 GRLLGLNAKIDKFQWELRGTQLQADLMVITLRGCDMVLGAQWLETLGPITCDFKKSVMQF 317
>gi|261865347|gb|ACY01928.1| hypothetical protein [Beta vulgaris]
Length = 1583
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I + + V++D G+THN++ L + I + F V++G G +G C
Sbjct: 421 KMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLGTGAEAHGQGECKA 480
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
V +QGV D+ L +D +LGVQWLEKLG ++T+ K T+++
Sbjct: 481 VPLHLQGVCVMEDYLPLTLGNSDLILGVQWLEKLGTMVTNWKTQTLQY 528
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 83/197 (42%), Gaps = 33/197 (16%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
+ R R + + + + RF ++ + + Q V Y+ F + + +
Sbjct: 152 ENRRRPIHRWSEMRWMLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGI- 210
Query: 67 PDAILDC-FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKL-----QSYNQKSISW-- 118
P++I F+S LK I+NE+ I PS+L A+ LA +E+KL + + K+ S+
Sbjct: 211 PESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSA 270
Query: 119 --------KPTNTPIPTTTRNE-TNIRLNPLLPLPPP--------NPSNPPKIALPIC-- 159
KPT + PT + N T P P P N N PK LPI
Sbjct: 271 HNPNSYIPKPTLSAKPTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKP 330
Query: 160 -----RLTAVEMQTRQE 171
RL+ E+Q ++E
Sbjct: 331 FGEIRRLSEKELQYKRE 347
>gi|147807720|emb|CAN66553.1| hypothetical protein VITISV_018166 [Vitis vinifera]
Length = 1448
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I +K + +L+D+G+THN+L L L L + T S+ V +G G ++ +G C
Sbjct: 2 KIKGMIGSKEVIILVDSGATHNFLSLELVQQLALPLTTTTSYEVMMGTGISVKGKGICRG 61
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTME 296
V MQG+ DF L+ D +LG+ WL LG + + K LTM+
Sbjct: 62 VCISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNWKMLTMK 108
>gi|449479937|ref|XP_004155752.1| PREDICTED: uncharacterized protein LOC101232675 [Cucumis sativus]
Length = 436
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 58/288 (20%)
Query: 43 TQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102
T S Y F + ++ +LD F++GL+PT+Q E+ P L + + A+
Sbjct: 8 TLDGSYNDYVKKFVQYSAPLPHMVESMLLDAFVTGLEPTLQAEVISRHPQTLEECMKEAQ 67
Query: 103 LIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALP-ICRL 161
L Q +I P + + E RL+ L S K +L C++
Sbjct: 68 L---------QVTI---PIKDRVKRLSDTEFRARLDKGLCF-----SCNEKYSLGHRCKM 110
Query: 162 TAVEMQTRQEPSEILQEEE-------------------ILVEDTVP-------------- 188
R++ IL EEE ++V +T
Sbjct: 111 -------REKRELILNEEESGGEEVKMEETEEVIELNQLVVAETTEIELKTLTGLTSKGT 163
Query: 189 KQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS 248
+L + + + +LID+G+T+N++H +A L+IE F V VG+G R + +G C
Sbjct: 164 MKLKGHVKGREVVILIDSGATNNFIHEAVAMEGGLSIELGTQFGVTVGDGTRCKGKGICR 223
Query: 249 KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTME 296
KV+ ++ + DF +++ D VLG+QWL+ G + T K +E
Sbjct: 224 KVEPRLKEMTVITDFLVVELGNIDVVLGMQWLDTTGTMKTLEKTWDIE 271
>gi|208609049|dbj|BAG72147.1| hypothetical protein [Lotus japonicus]
gi|208609053|dbj|BAG72149.1| hypothetical protein [Lotus japonicus]
Length = 1520
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N+ + +LID G+T N++ L L + + T ++V VGNG + R+ G C
Sbjct: 388 KVKGKIGNREVLILIDCGATINFISQDLVVELEIPVIATSEYVVEVGNGAKERNSGVCKN 447
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+K E+QG+ F IL + VLG+ WL LG I + + L +++ +G
Sbjct: 448 LKLEVQGIPIMQHFFILGLGGTEVVLGMDWLASLGNIEANFQELIIQWVSQG 499
>gi|449455495|ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
Length = 1503
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 23/307 (7%)
Query: 9 RYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD 68
R + +E L + F + + A L ++ Q S Y F + ++
Sbjct: 446 RRKRVESWEDLKERMFDFFNDTGQQSLGARLIRIKQEVSYSEYVKKFVTYSAPLPDMAES 505
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTT 128
+LD F++GL+P++Q E+ P L + + A+L D+ ++ I
Sbjct: 506 VLLDAFLTGLEPSLQAEVISRHPQTLEECMKEAQLANDR-----NIALKLAMEELDIVEP 560
Query: 129 TRNETNIRLNP-------------LLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEI 175
RNE + + + + P ++ K LPI RL+ E + R +
Sbjct: 561 KRNENSSKFQGKNEKTESKKTEFVMKQVTIPLKNDYQKKDLPIKRLSDTEFRARLDKGLC 620
Query: 176 LQEEEILVEDTVPKQLSAKINNKPLSVLI-DTGSTHNYLHPRLAHFLHLAIEKTMSFLVA 234
+ E P + L +LI + H L+I+ F V
Sbjct: 621 FR----CNEKYAPGHRCKGREKRELMLLILNEEEDHKREEDTEDEASELSIDPGTRFGVT 676
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
+GNG + G C +VK +++ + ADF ++ D VLG+QWL+ G + +LT
Sbjct: 677 IGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTGTMKVHWPSLT 736
Query: 295 MEFTYKG 301
M F KG
Sbjct: 737 MTFWMKG 743
>gi|77555174|gb|ABA97970.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1548
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 124/304 (40%), Gaps = 46/304 (15%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNL 94
L LTQT SV Y+S F + ++ P ++ F+ GLK +++ + +P+++
Sbjct: 233 LLLLTQTGSVTEYRSKFNQLVYQLRLYDPLLSDTFLIRHFLLGLKDELRSAVQAQQPTSV 292
Query: 95 RDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKI 154
A +A E K +K + I R ++L P L +
Sbjct: 293 SQAYLVALAHESAQLGTGTKKGHYKKEHVAI----RGTDKLKLAPG-ELWKAQQLKEYRR 347
Query: 155 ALPIC--------------RLTAVEMQTR--QEPSEILQEEEI----------------- 181
A +C + V+++ QE SE+L +E +
Sbjct: 348 AQGLCFKCGEKYAPGHVCAKQEGVQLKALHVQEESEVLSDEVLDAITALDVSSDSISLSL 407
Query: 182 -LVEDTVPK---QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
+ T P QL A + N+ + +L+D+GSTH+++ L H L L+ E V V N
Sbjct: 408 HAMAGTCPSHTVQLRALVQNQVIIILVDSGSTHSFIDAGLCHRLQLSTESIQPTSVRVAN 467
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
GE + E + + +QG F +L D VLG+ WL + + D A ++F
Sbjct: 468 GETLCCEAKVPQFAWWVQGHEFSFPMRVLPMGGYDLVLGMDWLTQFSPMTCDWAAKQLQF 527
Query: 298 TYKG 301
+Y G
Sbjct: 528 SYNG 531
>gi|78183243|emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L+ + K + VLIDTGSTHN+++ +L H I+ + V +G I+ G C
Sbjct: 379 RLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEG 438
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ ++MQG F + + S D +LG+QWL + GKI D L MEF
Sbjct: 439 ISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTNLIMEFA 487
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + L +L Q ++E Y F+N+ R T L L C++ GL P
Sbjct: 147 ALRTRFG-VEFESPMEELKRLVQQGNLEEYHEAFDNLACR-TELSESLKLQCYLGGLNPE 204
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
+ + + P L +A+ +AKL E L+ ++KS S
Sbjct: 205 LCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNS 240
>gi|449530792|ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
Length = 943
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 147/359 (40%), Gaps = 75/359 (20%)
Query: 10 YRALEEQ------AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
YR+ EE+ A L + RF + + ++ QT++VE Y++ F+ + ++
Sbjct: 160 YRSQEERDKFIDWANLKERVLVRFRSTREGSLYGRFLRIQQTTTVEEYRNLFDKLVAPLS 219
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ--------SYNQKS 115
+L + + F+SGLKP IQ E+ +P L + +A +E++ Y+ +
Sbjct: 220 DLPEKVVEETFMSGLKPWIQTEMDFCEPKGLSQMMRIAHKVENREDIRREANHPGYSGEK 279
Query: 116 ISWKPT---NTPIPTTTRNETNIRLNPLLPLPPPNPSNPP-KIALPICRLTAVEMQTRQE 171
+S + ++ I + N+ N P+ + S + A P RL+ E Q+R+E
Sbjct: 280 LSNTGSGNKDSTIGNSGDNKGNWNW-PMRTVTLRGTSGEEVRKAGPTKRLSDAEFQSRKE 338
Query: 172 PS---------------------------------------------------EILQEEE 180
E++QEE+
Sbjct: 339 KGLCFRCNEKYSHDHKCKTKEQRELHMLVVMGENEEYEIIEEEDIEQKELNAVEVVQEEQ 398
Query: 181 ILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER 240
+VE ++ + + P ++ I +N++ L LH+ + T ++ V +G+G
Sbjct: 399 TVVELSINSVVGL---SNPGTMKI--AEPYNFISESLVEELHINTKSTTNYGVILGSGTA 453
Query: 241 IRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
I+ + C ++ + DF L+ DA+LG+QWL LG D K L + FT+
Sbjct: 454 IKGKRVCEAIEMVLGKWRVVDDFLPLELGGVDAILGMQWLYSLGITEVDWKNLILTFTH 512
>gi|78183249|emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L+ + K + VLIDTGSTHN+++ +L H I+ + V +G I+ G C
Sbjct: 379 RLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEG 438
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ ++MQG F + + S D +LG+QWL + GKI D L MEF
Sbjct: 439 ISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTNLIMEFA 487
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + L +L Q ++E Y F+N+ R T L L C++ GL P
Sbjct: 147 ALRTRFG-VEFESPMEELKRLVQQGNLEEYHEAFDNLACR-TELSESLKLQCYLGGLNPE 204
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
+ + + P L +A+ +AKL E L+ ++KS S
Sbjct: 205 LCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNS 240
>gi|78183241|emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
Length = 1508
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L+ + K + VLIDTGSTHN+++ +L H I+ + V +G I+ G C
Sbjct: 379 RLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEG 438
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ ++MQG F + + S D +LG+QWL + GKI D L MEF
Sbjct: 439 ISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTNLIMEFA 487
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + L +L Q ++E Y F+N+ R T L L C++ GL P
Sbjct: 147 ALRTRFG-VEFESPMEELKRLVQQGNLEEYHEAFDNLACR-TELSESLKLQCYLGGLNPE 204
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
+ + + P L +A+ +AKL E L+ ++KS S
Sbjct: 205 LCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNS 240
>gi|147810501|emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 131/315 (41%), Gaps = 75/315 (23%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + A L L QT S+++Y F+ + R ++ L F+SGL
Sbjct: 197 ALNARFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRA-DIKESHALSFFLSGLIDE 255
Query: 82 IQNELAIHKPSNLRDAIALAKL-------IEDKLQSYNQKSISWKPTN------TPIPTT 128
+Q + + KP L DA +LA+L +++K + ++ + PT TPI +
Sbjct: 256 LQMPVRMFKPQTLADAYSLARLQEIAVAALQNKPKPVSKGPSPYSPTTNHYHKATPITSI 315
Query: 129 TRNETNIRLN--------PLLPLPPPN--PSNPPKI-----------------ALPIC-- 159
++ TN+ LLPLPP P P I A +C
Sbjct: 316 SQYATNLSNTTFPKTTNAGLLPLPPSTNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFW 375
Query: 160 --------------RLTAVEMQTRQE---PSEILQ-------EEEILV--------EDTV 187
+L +++Q + P LQ +E+I + ED+
Sbjct: 376 CDEKFTPGHKCKRKQLYVMQIQVETDGEGPEGNLQMEGLGKEDEQIQLSLNALMSNEDSQ 435
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
L+ + L VLID+GS+HN+L ++A + +K V V NG+ + C
Sbjct: 436 TMTLNGNYKGRSLFVLIDSGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGQELHCTALC 495
Query: 248 SKVKFEMQGVGFEAD 262
S ++ MQG F A+
Sbjct: 496 SDFRWRMQGQEFIAE 510
>gi|62733754|gb|AAX95863.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1126
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 123/304 (40%), Gaps = 22/304 (7%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAIL 71
++E L A+ S+FG Y H L L Q +SVE Y + FE + +R + +L
Sbjct: 260 SVETWPELCIAVHSKFGKDKYQEHLEELEGLRQIASVEEYYTKFEELMHR-----EELVL 314
Query: 72 DCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRN 131
+ K + + N + D +K W+ + + R
Sbjct: 315 ELKKGTQKLGYKESYKLAAVKNNYQGKGILGHAPDDAGKTEEKP-KWEDRFESLKASRRA 373
Query: 132 ETNIRLNPLLPLPPPNPSNPPKIALPICR--LTAVEMQTRQEPSEILQEE---------E 180
+ PN P + L + L +++Q QE + + E E
Sbjct: 374 KGEC--FKCGEKWGPNHKCPKSVQLHVLEELLEVLQIQENQEAGQDCESEGSDEELVVSE 431
Query: 181 ILVEDTVPKQ---LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
V T+ K+ L I N+ + +LID+GS+ +++ L L LA+ +T V + +
Sbjct: 432 CAVSGTMGKRTVRLQGLIQNQEVLILIDSGSSSSFVAQHLVDSLSLAVLETAPAQVVIAD 491
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
G ++ +KV + QG F +D +L D +LG+ WLE + + + + F
Sbjct: 492 GGVLQCNKVATKVDWWCQGHSFTSDLKVLQLGGYDVILGMDWLEHFSPMWINWQRKKLRF 551
Query: 298 TYKG 301
TY+G
Sbjct: 552 TYQG 555
>gi|3810596|gb|AAC69378.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 945
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 28/278 (10%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALA 101
+ QT S+ YQ FE + N+V + ++ F++GL +I N + + +P +LR+ I L
Sbjct: 163 IGQTGSLSEYQHEFEWLQNKVYGWTQEVLVGAFMNGLYYSISNGIRMFQPRSLREVINLR 222
Query: 102 KLIEDKLQSYNQK------------SISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPS 149
+ K + +K ++ W + R ++R N
Sbjct: 223 VGWKGKSKDRRRKRATHHLHAVLSLTVWWCAKRQ---SNRRQRDSVRKNY-------ERK 272
Query: 150 NPPKIALPICRLTAVEMQTRQEPSEILQEEEIL------VEDTVPKQLSAKINNKPLSVL 203
+ + + +E +E + EI V+ T ++ A I+ L L
Sbjct: 273 GVWAYVSAVMKGENDDEAVEEESTEAEGKPEITLYALEGVDTTSTIRVRATIHRNRLIAL 332
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
I++GSTHN++ + ++L T F V V NG + + M GV F
Sbjct: 333 INSGSTHNFIGEKAVRGMNLKATTTKPFTVRVVNGMPLVCRSRYEAIPVVMGGVVFPVTL 392
Query: 264 HILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ L D +GVQWL LG + + K T++F + G
Sbjct: 393 YALPLMGLDLAMGVQWLSTLGPTLCNWKEQTLQFHWAG 430
>gi|218186024|gb|EEC68451.1| hypothetical protein OsI_36669 [Oryza sativa Indica Group]
Length = 554
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 146/350 (41%), Gaps = 70/350 (20%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV--TNLHPDA 69
A+E L A+ +FG Y L L Q ++E Y S FE + ++V N D
Sbjct: 192 AVESWLELCVAVNGKFGRDRYQQFLEKLDNLKQEGTIEEYYSRFEELMHKVLVYNRGYDE 251
Query: 70 --ILDCFISGLKPTIQNELAIHKPSNLRDAIALAK-----LIEDKLQSYNQKSI--SWKP 120
+ F+ GLK I+ + +H+P + A++LAK L+E L++Y++ ++ S+K
Sbjct: 252 TFFVTKFLGGLKTEIKAAIKLHRPGTVDAALSLAKTQEELLMEVNLKAYHKTTMKESFK- 310
Query: 121 TNTPIPTTTRNETNIRLNPLLPLPPPN----------------PSNPPKIALPICRLT-- 162
N +P+ + + PPP+ N + A C
Sbjct: 311 NNFKVPSPAKG---------ILGPPPDEIKKTEERPKWEERYDSLNAARRARGECFKCGE 361
Query: 163 ----------AVEMQTRQEPSEILQ-------------EEEILV--------EDTVPKQL 191
AV++ E E+ Q +EE+L+ E +L
Sbjct: 362 KFGPGHKCQKAVQLHVLDELLEVFQFSDEPGQVEESSSDEELLLSENALFGTEGKRTIRL 421
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVK 251
I N+ + +LID+GS+ +++ L LHL S LV + +G ++ + +V+
Sbjct: 422 QGLIGNQQVLILIDSGSSSSFMASHLVDRLHLVPNSIPSALVMIVDGGKLFCDEMAEQVE 481
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ QG F ++F IL D +LG+ WLE + T+ FT+ G
Sbjct: 482 WWCQGNTFSSNFKILGLGGYDLILGMDWLEAHSPMWIHWGRKTVRFTHSG 531
>gi|449504804|ref|XP_004162299.1| PREDICTED: uncharacterized protein LOC101228789 [Cucumis sativus]
Length = 250
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ +I K + VL+D G+THN++ +L L L + T ++ V +G+G I+ +G C +
Sbjct: 28 KIRGEIQGKEVIVLVDCGATHNFISDKLVATLQLPTKDTSNYGVILGSGTAIKGKGVCEQ 87
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITD-HKALTMEFTYKG 301
VK + G DF L+ D +LG+QWL LG D KAL + T G
Sbjct: 88 VKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVDWKKALEIRITEIG 140
>gi|18568267|gb|AAL75999.1|AF466646_7 putative polyprotein [Zea mays]
Length = 2749
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 129/366 (35%), Gaps = 85/366 (23%)
Query: 7 QTRYRALEEQAAL------TRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICN 60
QT Y ALE+ + RFGP + L +L TS+V+ Y F +
Sbjct: 518 QTWYYALEQDEGMPTWGRFKEVCTLRFGPPVRGTRLSELARLPFTSTVQDYADRFNAMLG 577
Query: 61 RVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKP 120
L + F+ GL I+ ++AI P +L+ A+ LA+ E + +
Sbjct: 578 HTRKLDAQQKAELFVGGLPDHIRADVAIRDPQDLQSAMYLARAFEQRAAA---------- 627
Query: 121 TNTPIPTTTRNETNIRLNPLLPLPP----------PNPSNPPKIALPICRLTAVEMQTRQ 170
TP P ++ P LP PP P+ A P RLT E Q R+
Sbjct: 628 QTTPPPARGFRQSR----PGLPAPPRPLTAPPTAAAQPAGTAAPARPFRRLTPAEQQERR 683
Query: 171 --------------------------------EPSEILQEEEILVEDTVPKQLSA----- 193
EP E + +I +E P + +A
Sbjct: 684 RQGLCFNCDEPYVRGHVCPRLFYLENDDYIDDEPQEEGADLQIALEQEPPSRAAAIIPTV 743
Query: 194 ------------------KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAV 235
IN L L+D+GST N++ L L L + V V
Sbjct: 744 SLHALAGVRTPNAMLLPVSINGHRLVALVDSGSTTNFMSVGLMSRLQLPSTPHPTIKVQV 803
Query: 236 GNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
NG+ I +G V + F D L D +LG ++L LG I+ D L+M
Sbjct: 804 ANGDNIPCQGMARSVDLRVGTEQFSIDCIGLTLGTFDVILGFEFLRLLGPILWDCDRLSM 863
Query: 296 EFTYKG 301
FT G
Sbjct: 864 SFTKGG 869
>gi|78183245|emb|CAJ00275.1| hypothetical protein [Lotus japonicus]
Length = 1112
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L+ + K + VLIDTGSTHN+++ +L H I+ + V +G I+ G C
Sbjct: 379 RLTGWLGKKRIFVLIDTGSTHNFINQKLCHEGLSKIKCLQPVKITVADGGIIQGTGWCEG 438
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ ++MQG F + + S D +LG+QWL + GKI D L MEF
Sbjct: 439 ISWKMQGYTFTDNAIAIPLSSCDLILGMQWLRQRGKISWDFTNLIMEFA 487
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A+ +RFG + + L +L Q ++E Y F+N+ R T L L C++ GL P
Sbjct: 147 ALRTRFG-VEFESPMEELKRLVQQGNLEEYHEAFDNLACR-TELSESLKLQCYLGGLNPE 204
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
+ + + P L +A+ +AKL E L+ ++KS S
Sbjct: 205 LCTGVKMFGPRTLLEAMRIAKLQERSLELLHKKSNS 240
>gi|6466937|gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I N + +L+D+G+T N++ L + +T SF V VG G I+S G C
Sbjct: 514 KMRGYIGNTKVVLLVDSGATCNFISEALVREKGWLVTQTRSFGVKVGGGRIIKSSGKCVD 573
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+ E+QG+ F D+++ D D VLG WL LG+ + + L + +
Sbjct: 574 IPLEVQGIEFVQDYYLFDLGDLDLVLGFSWLAGLGETRANWRDLRISW 621
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 18/130 (13%)
Query: 10 YRALEEQAALTRAIESRFGPS---SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
+R +E+ L RF PS S ++H L + QT +VE Y+ FE + + ++
Sbjct: 290 WREFQEKFML------RFRPSRGSSAVDH---LLNVRQTGTVEEYRERFEELTVDLPHVT 340
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK------LQSYNQKSISWKP 120
D + F++GL+ ++++++ +P NL D + +AKLIE + Q NQ + P
Sbjct: 341 SDILESAFLNGLRRSLRDQVVRCRPVNLADIVEIAKLIESQERNAVSYQVRNQARTNTAP 400
Query: 121 TNTPIPTTTR 130
N + T +R
Sbjct: 401 FNNQVSTGSR 410
>gi|28209489|gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1155
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 39/304 (12%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCFISGLKPTIQNELAIHKPS 92
+ L LTQT ++ Y+ F+++ ++ P ++ F++GL I+ + I P
Sbjct: 202 SALDTLTQTGTMTEYKQQFDSLVYQIRVFDPSMGGKMLVTHFMNGLTEEIRAAVVIQLPD 261
Query: 93 NLRDAIALAKLIEDKLQSYNQKSISWKPTNTP-IPTTTRNETNIRLNPLLPLPPPNPSNP 151
++ A A+A + E L S K++ K P + ++T + L
Sbjct: 262 TVQQASAIALMQESVLASRATKALKGKFVKLPQYKSDVSSDTTLGRVDKGDLWKAKQLKD 321
Query: 152 PKIALPIC-----RLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAK------------ 194
+ A +C + T + ++ EE+L +D + ++A+
Sbjct: 322 YRRAQGLCFKCGDKYTPEHRCAVGGQIKAMKLEEVLTDDILDAVIAAEQSDDEEDCHISL 381
Query: 195 -----------------INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
+++K L +L+D+GS+H+++ AH L L ++ S LV V N
Sbjct: 382 NAFTGAHLPTAIHLRALVHSKVLLLLVDSGSSHSFIDYNFAHMLGLPLKPIPSTLVKVAN 441
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
G+ + + + +QG F D ++ DA+LG+ WLE+ G++ T++F
Sbjct: 442 GDCLPCQYVVPSFSWWIQGHTFTYDMRVVTLEGHDAILGMDWLEQWGEMSCHWANKTLKF 501
Query: 298 TYKG 301
Y+G
Sbjct: 502 QYQG 505
>gi|218200076|gb|EEC82503.1| hypothetical protein OsI_26980 [Oryza sativa Indica Group]
Length = 471
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L A + NK L +L+D+GS+H++L A L L ++ FLV V NG+ I + +
Sbjct: 44 RLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIAPFLVKVANGDCIPCQFVVPQ 103
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ QG F D ++ DA+LG+ WL + G + + T++F Y+G
Sbjct: 104 FTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWAKKTLKFMYQG 155
>gi|224132328|ref|XP_002321312.1| predicted protein [Populus trichocarpa]
gi|222862085|gb|EEE99627.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 119/303 (39%), Gaps = 68/303 (22%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
AI ++FG + I KLTQ +E Y + FISGLK
Sbjct: 133 AICTKFGNKANIVEEFN--KLTQEGGIEKYIES-----------------SSFISGLKED 173
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLL 141
I+ L I KP L + + K Q + ++ K PTT
Sbjct: 174 IKPMLKILKPVTL-----MTTFDQSKWQEESNSVLARKNKFVSRPTT------------- 215
Query: 142 PLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEE-----EILVEDTVPKQLSAKIN 196
+ P+ C + + M + + L E E L+++ K+ S +N
Sbjct: 216 AVQSGRPTGYK------CGVKGLHMIDGNKEEDFLDVEAENIIEKLMKNKKIKEYSLSLN 269
Query: 197 ------------------NKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG 238
+ L +LID+GSTHN++ +A L ++IE+++ V + NG
Sbjct: 270 ALADNYAHNTIRIRGNYHGRELVILIDSGSTHNFIDEHIAGELQISIERSLVLTVTIANG 329
Query: 239 ERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
I + + ++ K+ MQ F D IL R D VLG+ WL +++ D + + F
Sbjct: 330 STILCDSYTTEFKWFMQNYEFVVDLKILKLGRCDVVLGMDWLNS--QLLFDFIKIKISFR 387
Query: 299 YKG 301
+G
Sbjct: 388 KEG 390
>gi|449479800|ref|XP_004155711.1| PREDICTED: uncharacterized protein LOC101230021 [Cucumis sativus]
Length = 1480
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
Query: 173 SEILQEEEILVEDTVPK----------QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
+E++QEE +VE ++ ++ K+ + + VLID G+THN++ L L
Sbjct: 1194 AEVIQEEHAVVELSINSVVGLSNPGTMKVKGKLLGREIIVLIDCGATHNFISESLVEELQ 1253
Query: 223 LAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
++ + T ++ V +G+G I+ +G C ++ + DF +L+ DA+LG+QWL
Sbjct: 1254 ISTKSTTNYGVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLLLELGGVDAILGMQWLYS 1313
Query: 283 LGKIITDHKALTMEF 297
LG D K L + F
Sbjct: 1314 LGITEVDWKNLILTF 1328
>gi|77551695|gb|ABA94492.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 306
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 171 EPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMS 230
EP L ++ D +L I+ + LID+GSTHN++H LAH L L +E
Sbjct: 167 EPRVSLSALSVVGGDNT-MRLPVMIDGLRVVSLIDSGSTHNFIHTELAHHLRLRLEPVRD 225
Query: 231 FL-VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQW--LEKLGKII 287
L V V NG+RI S G C + + G F D LD D +LG +W L+ LG ++
Sbjct: 226 GLRVVVANGDRIVSPGRCHNLPLLIDGEIFRVDCFALDLCAVDIILGTEWLQLQTLGPVL 285
Query: 288 TDHK 291
D K
Sbjct: 286 WDFK 289
>gi|115487072|ref|NP_001066023.1| Os12g0121200 [Oryza sativa Japonica Group]
gi|113648530|dbj|BAF29042.1| Os12g0121200, partial [Oryza sativa Japonica Group]
Length = 461
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ A++ ++ L L+D+GSTHN+++ +AH + +++ VAV NG+R+ S G C
Sbjct: 3 KVWARLGSQELVALLDSGSTHNFINDAIAHQAGVPLQRRPGLSVAVANGDRVPSPGRCPP 62
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+ + F+ DF+ L D VLG QWL LG + D ++ F
Sbjct: 63 QRVSIGSHEFDIDFYALPLGGYDIVLGAQWLGTLGPTLWDFSRQSLAF 110
>gi|449450213|ref|XP_004142858.1| PREDICTED: uncharacterized protein LOC101220049 [Cucumis sativus]
Length = 250
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ +I K + VL+D G+T N++ +L L L + T ++ V +G+G I+ +G C +
Sbjct: 28 KIRGEIQGKEVIVLVDCGATQNFISDKLVATLQLPTKDTSNYGVILGSGTAIKGKGVCEQ 87
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITD-HKALTMEFTYKG 301
VK + G DF L+ D +LG+QWL LG D KAL + T G
Sbjct: 88 VKLNLNGWMITTDFLPLELGGVDVILGMQWLYSLGVTEVDWKKALEIRITEIG 140
>gi|449511951|ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
Length = 707
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 74/139 (53%), Gaps = 10/139 (7%)
Query: 173 SEILQEEEILVEDTV--------PK--QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
+E++QEE +VE ++ P+ ++ K+ + + VLID +THN++ L L
Sbjct: 385 AEVIQEEHAVVELSINSVVGLSNPRTMKVKGKLLGRQIIVLIDCEATHNFIREGLVEELQ 444
Query: 223 LAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
++ + T ++ V +G+G I+ +G C ++ + DF L+ DA+LG+QWL
Sbjct: 445 ISTKSTTNYGVILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLPLELGGVDAILGMQWLYS 504
Query: 283 LGKIITDHKALTMEFTYKG 301
LG D K L + FT+ G
Sbjct: 505 LGITEVDWKNLILTFTHHG 523
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 10 YRALEEQ------AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
YR+ EE+ A L + RF + + ++ QT++VE Y++ F+ + ++
Sbjct: 154 YRSQEERDKFVDWANLKERVLVRFRSTREGSLYERFLRIQQTTTVEEYRNLFDKLVAPLS 213
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+L + + F+ GLKP IQ E+ +P L + +A+ +E++
Sbjct: 214 DLADKVVEETFMLGLKPWIQAEMDFCEPQGLSQMMRIAQKVENR 257
>gi|147767990|emb|CAN67159.1| hypothetical protein VITISV_039497 [Vitis vinifera]
Length = 711
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 93/233 (39%), Gaps = 78/233 (33%)
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTT 128
A++ F+ LK I +++ + KP +L++AI+LA++ +D+L
Sbjct: 131 ALVGTFMGSLKSEIADDIWMFKPKSLKEAISLARMRDDQL-------------------- 170
Query: 129 TRNETNIR-LNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTV 187
TR R L P P P + K L + RLT EMQ
Sbjct: 171 TRQRRFTRPLQPNCPQPDFSSQMKSKPTLTMKRLTWEEMQ-------------------- 210
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
+GSTHN++ ++A LHL + T F V V NG ++ +G
Sbjct: 211 -----------------KSGSTHNFISEKVADMLHLPVVPTKPFTVKVANGTPLKCQGRF 253
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
V +Q GVQWLE+LG ++ + K LTM F ++
Sbjct: 254 EHVHVILQ--------------------GVQWLEQLGIVVCNWKKLTMVFQWE 286
>gi|449456255|ref|XP_004145865.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 818
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 129/345 (37%), Gaps = 62/345 (17%)
Query: 9 RYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD 68
R + +E L + F + + A L + Q S Y F + ++
Sbjct: 141 RRKRVESWEDLKERMFDFFNDTGQQSLGARLICIKQKGSYSEYVKKFVTYSAPLPDMAES 200
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIED---------------------- 106
+LD F++GL+P++Q E+ P L + + A+L+ D
Sbjct: 201 VLLDAFLTGLEPSLQAEVISRHPQTLEECMKEAQLVNDRNIALKPAMEELDIVELKRNEN 260
Query: 107 --KLQSYNQKSIS----------------------WKPTNTPIPTTTRNETNIRLNPLLP 142
K Q N+K+ S ++ +TPI + E RL+ L
Sbjct: 261 SNKFQGKNEKAESKKTEFVMKQVTIPLKNDYQKNDYQKKDTPIKRLSDTEFRARLDKGLC 320
Query: 143 L-------PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKI 195
P K L + L E R+E +E E I + L +
Sbjct: 321 FRCNEKYAPGHRCKGREKRELMLLILNEEEDHKREEDTEDEASEVIEL-----NHLELNM 375
Query: 196 NNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQ 255
+N P+ + + TG T H L+I+ F V +GN + G C +VK +++
Sbjct: 376 DN-PIELRLITGVTSKGTMKLKGH---LSIDPGTRFGVTIGNDNQCEGSGICKRVKVKLK 431
Query: 256 GVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+ ADF ++ D VLG+QWL+ G + +LTM F K
Sbjct: 432 ELTIVADFLAVELGTVDLVLGMQWLDTTGTMKVHWPSLTMTFWAK 476
>gi|297608672|ref|NP_001061948.2| Os08g0451600 [Oryza sativa Japonica Group]
gi|215768264|dbj|BAH00493.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255678494|dbj|BAF23862.2| Os08g0451600 [Oryza sativa Japonica Group]
Length = 707
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L A + NK L +L+D+GS+H++L A L L ++ LV V NG+ I + +
Sbjct: 154 RLRALVQNKVLLLLVDSGSSHSFLDYNFAQLLGLQLQPIAPSLVKVANGDCIHCQFMVPQ 213
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ QG F D ++ DA+LG+ WL + G + + T++F Y+G
Sbjct: 214 FTWWFQGRTFTYDMRVVPLGGHDAILGMDWLAQWGDMSCNWANKTLKFMYQG 265
>gi|18855070|gb|AAL79762.1|AC096687_26 putative polyprotein [Oryza sativa Japonica Group]
gi|108711868|gb|ABF99663.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1087
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
QL A +N+ L VL+D+GS+H++++ L H LHL E V V NGE + + S+
Sbjct: 414 QLRALSSNQVLIVLVDSGSSHSFINSALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQ 473
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +QG F +L D VLG+ WL + + D A ++F+Y+G
Sbjct: 474 FDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAAKWLQFSYQG 525
>gi|242085414|ref|XP_002443132.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
gi|241943825|gb|EES16970.1| hypothetical protein SORBIDRAFT_08g010830 [Sorghum bicolor]
Length = 1462
Score = 70.5 bits (171), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 50/102 (49%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
L L D+GS+HN++ R A L + V NGERI G + F +QG F
Sbjct: 338 LVALSDSGSSHNFISERAAQRTGLLVVSRPRLSAVVANGERIACPGVLPQAPFVIQGSSF 397
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
AD I+ + D VLG QWL LG + D A TM F +G
Sbjct: 398 TADLFIMPLAGFDVVLGAQWLGTLGPVTWDFTARTMSFQQQG 439
>gi|15042811|gb|AAK82434.1|AC091247_1 putative polyprotein, 5'-partial [Oryza sativa Japonica Group]
Length = 799
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
QL A +N+ L VL+D+GS+H++++ L H LHL E V V NGE + + S+
Sbjct: 126 QLRALSSNQVLIVLVDSGSSHSFINSALCHRLHLLSEPIPPTSVRVANGEVLVCDAKISQ 185
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +QG F +L D VLG+ WL + + D A ++F+Y+G
Sbjct: 186 FDWWVQGHQFSFPVRVLPMGGYDLVLGMDWLTQYSPMTCDWAAKWLQFSYQG 237
>gi|124360394|gb|ABN08407.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+ K+ P+ +L+D+G+ N++ RLA L L I +T + +G+G + + G C
Sbjct: 140 RFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHG 199
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
V +QGV +E D + + D VLG+ WL ++G D M F Y+G
Sbjct: 200 VIISVQGVEWEIDVMLFELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFDYQG 251
>gi|14626274|gb|AAK71542.1|AC087852_2 putative reverse transcriptase [Oryza sativa Japonica Group]
gi|108711059|gb|ABF98854.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 258
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 183 VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIR 242
V DT+ Q+ + L+ L+D+GSTH+++ A L ++ V NGE++
Sbjct: 31 VADTM--QVQVTVGATTLTALLDSGSTHSFIAEEAACRTGLPVQPRPRMTATVANGEKVA 88
Query: 243 SEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
G + + G F D ++ + D VLG QW+ LG I+ D TM F Y G
Sbjct: 89 CPGVIRQAVLSIDGSLFTVDLFVIPLAGYDMVLGTQWMASLGPIVWDFTERTMSFQYHG 147
>gi|124360392|gb|ABN08405.1| Peptidase aspartic, active site [Medicago truncatula]
Length = 435
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+ K+ P+ +L+D+G+ N++ RLA L L I +T + +G+G + + G C
Sbjct: 140 RFQGKVREIPVLMLVDSGANKNFMSRRLALALGLRITETPVRRIRLGDGHVVPTLGECHG 199
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
V +QGV +E D + + D VLG+ WL ++G D M F Y+G
Sbjct: 200 VIISVQGVEWEIDVMLFELRGYDLVLGMAWLTQIGCTCIDWVEKKMRFDYQG 251
>gi|359372828|gb|AEV42261.1| hypothetical protein [Beta vulgaris]
Length = 1396
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 133/340 (39%), Gaps = 104/340 (30%)
Query: 32 YINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKP 91
++NH Q SV+ Y+S F + + N+ + FIS LK I+NE+ I
Sbjct: 164 WMNHH-------QEGSVKEYKSRFIELMAPLDNIPENIAQAQFISKLKEEIKNEMRI--- 213
Query: 92 SNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTT---------TRNETNIRLNPLLP 142
E+KL + +P+N P T R +T L P P
Sbjct: 214 -------------EEKLNRRGGRRWEPRPSNNYSPNTHTTPNSSQTFRTQTQTYLPPKHP 260
Query: 143 LPP------PNPSNPPK------IALP---ICRLTAVEMQ-------------------- 167
PP P+ +P K IA P I RL+ E+Q
Sbjct: 261 APPQSVFSSPSIVSPAKTKTHIPIARPYGEIRRLSEKELQHKRERGLCFRCDDKWSVGHR 320
Query: 168 TRQEPSEIL---QEEEI-----------------LVEDTV--------------PK--QL 191
++E S +L ++EEI + E V PK +L
Sbjct: 321 CKKELSVLLSCKEDEEIEYGELENAPQPEIPNTHIAETFVNPEISLNSVMGFSNPKTLKL 380
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVK 251
I + + V+ID G+THN++ L++ + F V++G G+ +R G C V
Sbjct: 381 RGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVSLGTGQEVRGTGECLAVP 440
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
+QGV E +D ++G+QWLEKLG ++T+ K
Sbjct: 441 LMVQGV-MENFLPPPPLGNSDVIMGIQWLEKLGTMVTNWK 479
>gi|440577416|emb|CCI55439.1| PH01B031C15.22 [Phyllostachys edulis]
Length = 267
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 55/119 (46%)
Query: 183 VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIR 242
+ T QL+ IN L L+D+GSTHN++ L + L++ VAV NG+ +
Sbjct: 58 IRKTQTMQLAVIINGVHLLALVDSGSTHNFVAAELVARVGLSLTPRTGLSVAVANGDHVT 117
Query: 243 SEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
S G C + F DF + D VLGVQWL LG I D M F +G
Sbjct: 118 SGGICRATLISIDKEDFILDFLTIPLDGFDVVLGVQWLGSLGPITWDFHHRMMRFQRQG 176
>gi|18568269|gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
Length = 2396
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 126/336 (37%), Gaps = 58/336 (17%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT----NLHPDAILDCF 74
R ++ RFG + + LF + Q+ +V Y F + + ++ N P F
Sbjct: 237 FCRQLQDRFGREQHESLIRQLFHIHQSGTVAEYVEQFSILVDHLSAYEANADPLYYTMRF 296
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYN-----------------QKSIS 117
I GL+ I+ + + +PSNL A +LA + E+ + Q S S
Sbjct: 297 IDGLRDDIKAVIMVQRPSNLDTACSLALVQEEATTARRWRRSEPSSSHAGPKTGVQLSAS 356
Query: 118 WKPTNTPIPTTTRNETN-------IRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQ 170
K T+ T + + ++ R L NP +L A+E
Sbjct: 357 TKWTSNKDSTQSASHSDKLESLRRFRRAKGLCDKCAEKWNPGHKCAATAQLHAME----- 411
Query: 171 EPSEILQEEEILVEDTVPKQ-------------------------LSAKINNKPLSVLID 205
E +L +EE+ D P + L+ I N PL +LID
Sbjct: 412 EVWSLLVDEEVPESDLSPPEPAPEQLFVTISKSAWTGSTGRQTLKLNGSIQNHPLLILID 471
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+GS+H +L+ +L L + V V NG + + ++++Q F +D
Sbjct: 472 SGSSHTFLNDQLRPHLQGVTSMASTLQVQVANGAMVTCHYKLLQAQWQIQNCSFTSDVSF 531
Query: 266 LDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
L D V+G+ WLE + D + Y+G
Sbjct: 532 LPLPYYDMVVGMDWLESFSPMRVDWAQKWLIIPYQG 567
>gi|449462405|ref|XP_004148931.1| PREDICTED: uncharacterized protein LOC101213941 [Cucumis sativus]
Length = 902
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 124/317 (39%), Gaps = 65/317 (20%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S Y F + ++ +LD F++GL+P++Q E+ P L D
Sbjct: 166 ARLIRIQQEGSYSEYVKKFVTYSAPLPDMAESVLLDAFLTGLEPSLQAEVISRHPQTLED 225
Query: 97 AIALA----------KLIEDKLQ----SYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP 142
+ A KL ++L N+ S ++ N T ++ + +P
Sbjct: 226 CMREAQLVNDRNVALKLAMEELDIVEPKRNENSSKFQGKNEK--TESKKTEFVMKQVTIP 283
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTR---------------------QEPSE----ILQ 177
L P PI RL+ E + R +E E IL
Sbjct: 284 LKNDYQKKDP----PIKRLSDTEFRARLDKGLCFKCNEKYSPGHRCKGREKRELMLLILN 339
Query: 178 EEE-------------ILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLA 224
EEE ++E L ++N P+ + + TG T H L+
Sbjct: 340 EEEDHKREEDAEDEASEVIE---LNHLELNMDN-PIELRLITGVTSKRTKKLKGH---LS 392
Query: 225 IEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
I+ F V +GNG + G C +VK +++ + ADF ++ D VLG+QWL+ G
Sbjct: 393 IDLGTRFGVTIGNGNQCEGSGICKRVKVKLKELTIVADFLAVELGTVDLVLGMQWLDSTG 452
Query: 285 KIITDHKALTMEFTYKG 301
+ +LTM F KG
Sbjct: 453 TMKVHWPSLTMTFWTKG 469
>gi|108862706|gb|ABA98602.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2202
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 132/338 (39%), Gaps = 93/338 (27%)
Query: 41 KLTQTSSVEAYQSTFENICNRVTNLHPD----AILDCFISGLKPTIQNELAIHKPSNLRD 96
++ QT +VE + F+++ N++ P I+ F GL+ I++ + + +P +L
Sbjct: 544 QIKQTGTVEEFYERFDDVTNQLLAFDPMYNQLTIVHRFTEGLRFDIRHAVMMQRPRDLET 603
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSN------ 150
A+A+A L E+ W T P + +R+ PLP P PS
Sbjct: 604 ALAIACLQEE-----------WTETQKPKEFRKLGDHVLRIKGAYPLPLP-PSKVSESSA 651
Query: 151 --------PPKI---------------ALPICRLTA------------VEMQTRQEPSEI 175
P K A +C L A V++ QE +
Sbjct: 652 GAGKSSSEPVKTTAIADRMRALKAHRRAQGLCYLCAEKWSLSHKCSSSVQLNAVQEVFAL 711
Query: 176 LQEEEI-----LVEDTVPK-----------------------QLSAKINNKPLSVLIDTG 207
LQ+ + EDT P +L I + +L+D+G
Sbjct: 712 LQQNDSDSGDSSGEDTEPHSLFSLSVHAIQGTTTAQTMRQTMRLQGIIQGYDILILVDSG 771
Query: 208 STHNYLH----PRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
S+ +++ P+L++ + L + SF V V NG+ + E + V + +QG F +
Sbjct: 772 SSCSFISLSVMPQLSNLIQLPV----SFQVKVANGQMLSCETELANVSWSVQGHHFCSAL 827
Query: 264 HILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+L D +LG+ WLE+ + D + T+ FT G
Sbjct: 828 KVLPLQSYDMILGMDWLERYSPMDIDWQQKTIRFTLDG 865
>gi|10122034|gb|AAG13423.1|AC051634_4 putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
Length = 894
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 126/304 (41%), Gaps = 39/304 (12%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCFISGLKPTIQNELAIHKPS 92
+ L LTQT +V Y+ F+ + ++ P ++ F++GL I+ + + P
Sbjct: 202 SALDTLTQTGTVTEYKQQFDYLVYQIRVFDPSVGGKMLVTRFMNGLTEEIRAAVVVQLPD 261
Query: 93 NLRDAIALAKLIEDKLQSYNQKSISWKPTNTP-IPTTTRNETNIRLNPLLPLPPPNPSNP 151
++ + A+A + E L S K++ K P + ++T L
Sbjct: 262 TVQQSSAIALMQESVLASRATKALKGKFVKLPQYKSDVSSDTTPGQVDKGDLWKAKQLKD 321
Query: 152 PKIALPICRLTAVEMQTRQEPS-----EILQEEEILVEDTVPKQLSAK------------ 194
+ A +C + + + +Q EE+L +D + ++A+
Sbjct: 322 YRRAQGLCFKCGDKYTPEHRCAVGGQIKAMQLEEVLTDDILDAVIAAEQSDDEEDCHISL 381
Query: 195 -----------------INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN 237
+++K L +L+D GS+H+++ A L L ++ S LV V N
Sbjct: 382 NALTGAHLPTAILLRALVHSKVLLLLVDYGSSHSFIDYNFAQMLGLPLKPIPSTLVKVAN 441
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
G+ + + + +QG F D ++ DA+LG+ WLE+ G++ T++F
Sbjct: 442 GDCLPCQYVVPGFSWWIQGHTFTYDMRVVTLGVHDAILGMDWLEQWGEMSCHWANKTLKF 501
Query: 298 TYKG 301
Y+G
Sbjct: 502 QYQG 505
>gi|147811718|emb|CAN77256.1| hypothetical protein VITISV_008352 [Vitis vinifera]
Length = 1365
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ ++I PL++LID+GSTHN+LH + A + L E++ F V V NGER+ S G C+
Sbjct: 596 QIHSQIGKTPLTILIDSGSTHNFLHHKFAKIIGLKSERSCLFSVVVANGERLSSLGRCNG 655
Query: 250 VKFEMQGVGFE 260
VK +Q + E
Sbjct: 656 VKLFLQDIPIE 666
>gi|108864565|gb|ABA94541.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1347
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 135/327 (41%), Gaps = 66/327 (20%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT----NLHP 67
A+E + L A+ +FG Y L L Q ++E Y S FE + ++V
Sbjct: 189 AVESWSELCVAVNGKFGRDRYQQFLEKLDNLKQEGTIEEYYSRFEELMHKVLVYNRGYDE 248
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK-----LIEDKLQSYNQKSI--SWKP 120
+ F+ GLK I+ + +H+P + A++LAK L+E L++Y++ +I S+K
Sbjct: 249 TFFVTKFLGGLKTEIKAAIKLHRPGTVDAALSLAKTQEELLMEVNLKAYHKTTIKESFK- 307
Query: 121 TNTPIPTTTRNETNIRLNPLLPLPP----------------------------------- 145
N +P+ + +L PP
Sbjct: 308 NNFKVPSLAKG--------ILGPPPDEIKKTEERPKWEEQYDSLNAARRARGECFKCGEK 359
Query: 146 --PNPSNPPKIALPICRLTAVEMQTRQEPSEILQ---EEEILVEDTV------PKQLSAK 194
P P + L + Q EP ++ + +EE+L+ + + + +
Sbjct: 360 FGPGHKCPKAVQLHVLDELLEVFQFSDEPGQVEESSSDEELLLSENALFGTEGKRTIWLQ 419
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ + +LID+GS+ +++ L LHL S LV + +G ++ + +V++
Sbjct: 420 GLIQQVLILIDSGSSSSFMASHLVDRLHLVPNSIPSALVMIIDGGKLFCDEMAEQVEWWC 479
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLE 281
QG F ++F IL D +LG+ WLE
Sbjct: 480 QGNTFSSNFKILGLGGYDLILGMDWLE 506
>gi|242095940|ref|XP_002438460.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
gi|241916683|gb|EER89827.1| hypothetical protein SORBIDRAFT_10g020018 [Sorghum bicolor]
Length = 1437
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 54/109 (49%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ + + L+ L+DTGSTHN++ A L + V NGERI G +
Sbjct: 338 QVRVAVGDVTLTALLDTGSTHNFIAETAATRTGLPVLADPRLTATVANGERIACPGVLRQ 397
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ G GF D ++L + D VLG QWL LG+I D A T+ FT
Sbjct: 398 APIIIDGEGFCVDLYVLPLAGYDLVLGTQWLVTLGRIEWDFTARTLSFT 446
>gi|387169525|gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L + L + +D GSTHN++ ++A ++ +E T V G + +
Sbjct: 474 RLMGQYGKHKLHIFVDPGSTHNFIDIKVAKEINCKLEGTRPMTVDAALGGKTVTLFRSKD 533
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ MQG F + L D VLGVQWL LG I+ D L MEFT G
Sbjct: 534 FTWRMQGYSFTTEVRTLPLDHWDIVLGVQWLATLGPILWDFTYLRMEFTLNG 585
>gi|147769575|emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
Length = 446
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 11/136 (8%)
Query: 5 DMQTRYRALEEQA-----ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENIC 59
+ Q Y+ L+E+ L + SR+GP+ + + L +L Q SV YQS FE +
Sbjct: 200 EAQLWYQILKEEGEVAWLTLKEGLNSRYGPTEFDDFFGDLTRLKQVGSVREYQSQFEKLL 259
Query: 60 NRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ---SYN---Q 113
+RV L+ + CFI GL ++ ++ KP L A+ LA+L E K S+N +
Sbjct: 260 SRVGKLNQSQQVACFIGGLNEDVRIDVQAMKPPTLSAAVGLARLYEVKYHKRSSFNLEPK 319
Query: 114 KSISWKPTNTPIPTTT 129
K++S T T P ++
Sbjct: 320 KTVSTNSTVTSRPLSS 335
>gi|357130210|ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
distachyon]
Length = 635
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 117/310 (37%), Gaps = 52/310 (16%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
I FGP + N L L +T SV Y F + +RV + +A + F + L +
Sbjct: 13 ISQHFGPPTRANPFGELISLRRTGSVADYTKQFLQLVSRVKRILEEAERNIFTNNLGEPL 72
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP 142
+ ++ + +P+ L A+ +A + + + + PT P N +
Sbjct: 73 KTQVKMLRPTTLEAAMDMAV----SFEHFASITAAAGPTRPNRPPRPSNTAQV------- 121
Query: 143 LPPPNPSNPPKIALPICR-LTAVEMQTRQEPS---------------------EILQEEE 180
++ + A P+ + L A EM+ RQ E+ +EE
Sbjct: 122 ----VATDAIRGATPVFKKLNAAEMEERQAKGLCFNCDEKFVRGHRCKCLFYIEVADKEE 177
Query: 181 -------------ILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK 227
+ DT+ QL + + L LID+GSTHN++ LA +
Sbjct: 178 EEDLQISLLAITGVRTSDTM--QLVVWVGERELLALIDSGSTHNFISEELAAHVSAPFCT 235
Query: 228 TMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
V + NG+ + G + F D + + D VLG WL+ LG I+
Sbjct: 236 GRRLRVTIANGDHVTCSGLLRHTAIAIGQESFVVDLYAIPLGGFDVVLGTHWLKTLGPIL 295
Query: 288 TDHKALTMEF 297
D + L M F
Sbjct: 296 WDFERLYMSF 305
>gi|224119716|ref|XP_002331143.1| predicted protein [Populus trichocarpa]
gi|222873226|gb|EEF10357.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
T+++ +RFGPS + TL +L QT++VE Y+S FE + N++ L L CF+SG
Sbjct: 23 GFTQSLLTRFGPSILDDLMETLTRLHQTTTVEVYKSQFEILSNQLKGLAESYKLSCFLSG 82
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L+ I + + P NL A + K+ E+ + ++ + S RL
Sbjct: 83 LREDICFMVRMLNPFNLTVAFGMVKMQEENIVAFRRSS--------------------RL 122
Query: 138 NPLLPLPPPN-PSNPPKIALPICRLTAV 164
P P PN P++ K +PI RL+ +
Sbjct: 123 GSTSPRPFPNSPTSDKKALVPIQRLSPI 150
>gi|21397270|gb|AAM51834.1|AC105730_8 Putative plant disease resistance polyprotein [Oryza sativa
Japonica Group]
gi|108706267|gb|ABF94062.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 624
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L A +++K L +L+D+GS+HN++ A L L ++ S LV V NG+ + +
Sbjct: 200 RLRALVHSKVLLLLVDSGSSHNFIDYNFAQMLGLPLKPIPSTLVKVANGDCLPCQYVVPG 259
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +QG F D ++ DA+LG+ WLE+ G++ T++F Y+G
Sbjct: 260 FFWWIQGHTFTYDMRVVTLGGHDAILGMDWLEQWGEMSCHWANKTLKFQYQG 311
>gi|255559212|ref|XP_002520627.1| conserved hypothetical protein [Ricinus communis]
gi|223540188|gb|EEF41763.1| conserved hypothetical protein [Ricinus communis]
Length = 151
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
AL + +RFG + N L K+ QT S+ YQ FE + NRV A++ FI G
Sbjct: 63 ALVEELWARFGRAKGENFDEALSKIRQTGSLRDYQRQFEQLGNRVHGWTQKALVGTFIGG 122
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKL 103
LKP I + + KP L+DAI A++
Sbjct: 123 LKPEIADAIRFFKPKTLKDAIDYARM 148
>gi|224164086|ref|XP_002338641.1| predicted protein [Populus trichocarpa]
gi|222873062|gb|EEF10193.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
T+++ +RFGPS + TL +L QT++VE Y+S FE + N++ L L CF+SG
Sbjct: 23 GFTQSLLTRFGPSILDDLMETLTRLHQTTTVEVYKSQFEILSNQLKGLAESYKLSCFLSG 82
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRL 137
L+ I + + P NL A + K+ E+ + ++ + S RL
Sbjct: 83 LREDICFMVRMLNPFNLTVAFGMEKMQEENVVAFRRSS--------------------RL 122
Query: 138 NPLLPLPPPN-PSNPPKIALPICRLTAV 164
P P PN P++ K +PI RL+ +
Sbjct: 123 GSTSPRPFPNSPTSDMKALVPIQRLSPI 150
>gi|147855151|emb|CAN81740.1| hypothetical protein VITISV_009674 [Vitis vinifera]
Length = 771
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 61/230 (26%)
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTT 128
A++ F+ GL+ I + + + +P L++ I ++ +D+L
Sbjct: 34 ALVGTFMGGLRTEISDGIRMFQPQTLKNVIRFVRMRDDQL-------------------- 73
Query: 129 TRNETNIRLNPLLPLPPPN-PSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTV 187
R R L LPP N ++ PK
Sbjct: 74 VRQRRFTRAT--LALPPANRATSTPK---------------------------------- 97
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
Q++ KI + + +LID+ STHN + RL + L L + +F+V V NGE +R +G
Sbjct: 98 TMQVATKIGAQDVIILIDSESTHNLISERLTNLLRLLVVPMKTFIVRVSNGEHLRCQGQF 157
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG----KIITDHKAL 293
+V+ ++QG F + L D VLG L + TD++AL
Sbjct: 158 EEVQVDLQGTSFSLTLYSLPLIGLDVVLGFNGSSYLALWNWRFCTDYRAL 207
>gi|356555016|ref|XP_003545836.1| PREDICTED: uncharacterized protein LOC100800334 [Glycine max]
Length = 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%)
Query: 21 RAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKP 80
+A E F S Y + R LFKL+Q S+ AY + FE + NR+ L +L CFISGL P
Sbjct: 99 QAPELCFALSLYDDPRGALFKLSQQGSMFAYLAEFEALANRIMGLPTPFLLSCFISGLIP 158
Query: 81 TIQNELAIHKPSNLRDAIALAKLIEDKL 108
I+ E+ +P +L A LA+L EDK+
Sbjct: 159 EIRREVLALQPLSLVQAATLARLQEDKI 186
>gi|255583783|ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
gi|223527635|gb|EEF29747.1| conserved hypothetical protein [Ricinus communis]
Length = 462
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 117/271 (43%), Gaps = 63/271 (23%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
L L QT++V+ ++ FE I + L D + F++GL+P +Q EL P L +
Sbjct: 190 LLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAELRQWSPFGLDKKM 249
Query: 99 ALAKLIEDKLQS---YNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPK-- 153
+A+ IE+KL++ YNQ + + +TP T N ++ + P P++ PK
Sbjct: 250 QVAQKIEEKLKALGQYNQTTQNRWANSTPSGTHFTN----KVTQVSTTPSIKPNHFPKSF 305
Query: 154 -------IALP--------------------------ICRLTAV--EMQTRQEPS----- 173
+A P CRL + R +P
Sbjct: 306 TSSSNSTVAKPSGSVSTSTGSNNTRPPFKQMSHGEMEACRLKGLYYRCDGRYDPGHRCPN 365
Query: 174 ---EIL--------QEEEILVEDT--VP-KQLSAKINNKPLSVLIDTGSTHNYLHPRLAH 219
+IL +EE VE + +P +++ KI ++ + +LID+G++ N++ L
Sbjct: 366 KSLKILCVINGSSEEEEMTKVEQSKEIPTEEVRGKIKSRDIIMLIDSGASRNFISEALLE 425
Query: 220 FLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ L T SF V +GNG+ I S G C V
Sbjct: 426 KIGLTRLPTKSFKVQMGNGDEIDSTGVCKSV 456
>gi|293331925|ref|NP_001168083.1| uncharacterized protein LOC100381817 [Zea mays]
gi|223945897|gb|ACN27032.1| unknown [Zea mays]
Length = 117
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
L I+++ + +++D+ S+H++L +LA L + ++ +V V NG R++ HC
Sbjct: 19 LGGIIHHQAVRIMVDSDSSHSFLKTKLATQLQGIVPLSVPIVVQVANGARLQCSAHCPAT 78
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKL 283
+ +Q F DF ILD DA+LG+ WL +
Sbjct: 79 AWSVQEFTFSTDFKILDVFSYDAILGIDWLSQF 111
>gi|38345213|emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]
Length = 1409
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 128/313 (40%), Gaps = 52/313 (16%)
Query: 41 KLTQTSSVEAYQSTFENICNRVTNLH----PDAILDCFISGLKPTIQNELAIHKPSNLRD 96
+++Q+S++ Y F++I +++ P + F+ GLK I+ + + +P +L
Sbjct: 232 RISQSSTISDYVERFDSIMHQLLAYRGANEPIYFVTKFVDGLKDNIRLAVMMLRPQDLDT 291
Query: 97 AIALAKLIEDKLQSYNQKSI---------SWKPTNTPI-PTTTRNETNI-------RLNP 139
A +LA L E+ L+ Q + +PT TP+ PT T +E + R +
Sbjct: 292 ACSLALLQEEALEGVVQSGVRRQDSGVYVKSRPTPTPVLPTRTTSEDKVGAKSVRTREDK 351
Query: 140 LLPLPPPNPSN----------------PPKIALPICR--LTAVEMQTRQEP--------- 172
LL L S I L + L A++ T +E
Sbjct: 352 LLALKSYRRSKGLCFKSGERWGKDHKCAASIQLHVVEELLNALQFNTEEEKFSGDIPETA 411
Query: 173 ----SEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKT 228
I + ++ + +L + L +L+D+GSTH+++ R+
Sbjct: 412 DDALMSISYQSLNGIDSSTSIRLRGWVQGTELLMLVDSGSTHSFVDERIGSTFIGLKHLP 471
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIIT 288
V + +G ++ K + +QG F +DF +L DA+LG+ WL++ +
Sbjct: 472 QPLKVQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQI 531
Query: 289 DHKALTMEFTYKG 301
+ +EF++ G
Sbjct: 532 EWNHKWLEFSHLG 544
>gi|57834110|emb|CAE04775.3| OSJNBa0079C19.16 [Oryza sativa Japonica Group]
Length = 1002
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 56/315 (17%)
Query: 41 KLTQTSSVEAYQSTFENICNRVTNLH----PDAILDCFISGLKPTIQNELAIHKPSNLRD 96
+++Q+S++ Y F++I +++ P + F+ GLK I+ + + +P +L
Sbjct: 547 RISQSSTISDYVERFDSIMHQLLAYRGANEPIYFVTKFVDGLKDNIRLAVMMLRPQDLDT 606
Query: 97 AIALAKLIEDKLQSYNQKSI---------SWKPTNTPI-PTTTRNETNI-------RLNP 139
A +LA L E+ L+ Q + +PT TP+ PT T +E + R +
Sbjct: 607 ACSLALLQEEALEGVVQSGVRRQDSGVYVKSRPTPTPVLPTRTTSEDKVGAKSVRTREDK 666
Query: 140 LLPLPPPNPSN----------------PPKIALPICR--LTAVEMQTRQEP--------- 172
LL L S I L + L A++ T +E
Sbjct: 667 LLALKSYRRSKGLCFKSGERWGKDHKCAASIQLHVVEELLNALQFNTEEEKFSGDIPETA 726
Query: 173 ----SEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKT 228
I + ++ + +L + L +L+D+GSTH+++ R+
Sbjct: 727 DDALMSISYQSLNGIDSSTSIRLRGWVQGTELLMLVDSGSTHSFVDERIGSTFIGLKHLP 786
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG--KI 286
V + +G ++ K + +QG F +DF +L DA+LG+ WL++ +I
Sbjct: 787 QPLKVQIADGGQLSCSQVIPKCDWWIQGHNFSSDFRLLPLGSYDAILGMDWLQQFSPMQI 846
Query: 287 ITDHKALTMEFTYKG 301
+HK L EF++ G
Sbjct: 847 EWNHKWL--EFSHLG 859
>gi|115457202|ref|NP_001052201.1| Os04g0191000 [Oryza sativa Japonica Group]
gi|38346036|emb|CAE01900.2| OSJNBa0059D20.8 [Oryza sativa Japonica Group]
gi|113563772|dbj|BAF14115.1| Os04g0191000 [Oryza sativa Japonica Group]
Length = 1463
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 183 VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIR 242
+ DT+ QL + + L L+D GSTH+++ A L I+ + V NGER+
Sbjct: 337 IADTI--QLQVTVGDASLLALLDGGSTHSFIGEEAARRAGLPIQSSPRMTAIVANGERVA 394
Query: 243 SEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
G F + G F D ++ + D VLG +WL LG I+ D + +M F G
Sbjct: 395 CPGVIRDAAFTINGSTFHTDLFVMPLAGFDVVLGTRWLGTLGPIVWDFTSRSMAFQRDG 453
Score = 44.7 bits (104), Expect = 0.059, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 26 RFGPSSYINHRATLFKLTQ---TSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
RFGP A LF+L++ T +VE Y + F+ + R L + F GL P +
Sbjct: 130 RFGPPL---RSAPLFELSECRRTGTVEEYSNRFQALLPRAGRLDESQRVQLFTGGLLPPL 186
Query: 83 QNELAIHKPSNLRDAIALAKLIE 105
+ + IH P L A++LA+ +E
Sbjct: 187 SHAVRIHHPETLAAAMSLARQVE 209
>gi|38568032|emb|CAD40406.3| OSJNBa0065J03.2 [Oryza sativa Japonica Group]
Length = 1629
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 132/327 (40%), Gaps = 75/327 (22%)
Query: 40 FKLTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
F Q S+V Y F++I +++ + L P + FI GL+ ++ + + +P +L
Sbjct: 291 FHAQQNSTVTEYVEQFDSIMHQLMAYDSALTPVYFVTKFIEGLRDDVRGAVMLQRPQDLD 350
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTN----TPIPTTTRNETNIRLNPLLPLPPPNPS-- 149
A ++A L E+ L+S N+ + + N P+P +LN +P+PP S
Sbjct: 351 SACSIALLQEEILES-NKSTTHRRSDNHIAFRPVP---------KLNNYVPVPPGQRSVA 400
Query: 150 -----------------------NPPKIALPICRL------------TAVEMQTRQEPSE 174
+ A +C + T+V++ QE E
Sbjct: 401 VSAHDDKKGVESAKSREDKFASLKSYRRAKGLCFVCGERWGRDHKCATSVQLHVVQELLE 460
Query: 175 ILQEE----EILVED--------------TVPKQ--LSAKINNKPLSVLIDTGSTHNYLH 214
++ E +IL + +Q L + + +LID+GSTH+++
Sbjct: 461 AMRSECNSDDILTAKDPIESVEAIDGGLMAISQQALLRGWVQGTEILMLIDSGSTHSFID 520
Query: 215 PRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAV 274
+ L I + S V + +G ++ ++ QG F++DF +L+ DA+
Sbjct: 521 ESIGSKLVGLIPLSRSVTVKIADGGTMKCTQQILGCRWWTQGHYFKSDFKLLNLGSYDAI 580
Query: 275 LGVQWLEKLGKIITDHKALTMEFTYKG 301
LG+ WLE+ + D +E G
Sbjct: 581 LGMDWLEQFSPMQVDWVNKWLEVVIDG 607
>gi|242065034|ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ + L+D+GSTHN++ A L ++ V NGE+I G
Sbjct: 297 QVRVSVGTATFVALLDSGSTHNFIAEEAARRTGLRVQPRARMTAMVANGEKIPCPGVIRH 356
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ F D ++ + D VLG QW+ LG I+ D A ++ FTY+G
Sbjct: 357 APVTIDNTTFAIDLFVMPLAGYDIVLGTQWMATLGPIVWDFAARSLSFTYQG 408
>gi|218199564|gb|EEC81991.1| hypothetical protein OsI_25921 [Oryza sativa Indica Group]
Length = 426
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L + N+ + VL+D+GS N+L +L L L + + V + +G +I +
Sbjct: 232 RLQGLLQNQEILVLVDSGSFSNFLSEQLVSKLQLPTQTSAPSQVTIADGGKILCNQVVAN 291
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+++ QG F D +L D +LG++WLE + D K M FTY G
Sbjct: 292 LEWWCQGHTFSTDLKVLSLGSYDMILGMEWLEDFSPMWIDWKRKKMTFTYAG 343
>gi|147816473|emb|CAN64046.1| hypothetical protein VITISV_040537 [Vitis vinifera]
Length = 1259
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 2 TNEDMQTRYRAL-EEQAALTRAI-----ESRFGPSSYINHRATLFKLTQTSSVEAYQSTF 55
NE Q RA EE+A +T + +RFGP+ + L K+ Q YQ F
Sbjct: 128 ANEWWQATKRAYAEEEAEITWEVFEEELWARFGPTECEDFDEALSKIKQAGXFRDYQREF 187
Query: 56 ENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
E + N+V A++ F+ GL P I + + + +P +L++AI+LA++ +++LQ
Sbjct: 188 ERLVNKVQGWTQKALVGTFMGGLHPAIADGIRMFRPKSLKEAISLARMKDEQLQ 241
>gi|15451607|gb|AAK98731.1|AC090485_10 Putative retroelement [Oryza sativa Japonica Group]
gi|108706172|gb|ABF93967.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1461
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
P L ++ L L+DTGSTHN++ A L+++ V NGE++ G
Sbjct: 343 PILLRVQLGATTLVALVDTGSTHNFIGESAAARTGLSVQPRPRMTATVANGEKVACPGVL 402
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++G+ F D +++ + D VLG QW+ KLG++ D + F +G
Sbjct: 403 RHAPITIEGMPFHVDLYVMPLAGYDIVLGTQWMAKLGRMSWDVTTRALTFDLEG 456
>gi|15230067|ref|NP_189618.1| aspartyl protease-like protein [Arabidopsis thaliana]
gi|332644083|gb|AEE77604.1| aspartyl protease-like protein [Arabidopsis thaliana]
Length = 421
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 115/273 (42%), Gaps = 45/273 (16%)
Query: 33 INHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS 92
+NH+ + Q SV Y+ FE +C R L + F+ GL+P++Q + KP+
Sbjct: 3 LNHQPHYSGIQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELKPN 62
Query: 93 NLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPP 152
+ + QS + +S + + + I
Sbjct: 63 GI-----------NSYQSRQAELMSLTLVQAKLDVVKKKKGVIN---------------- 95
Query: 153 KIALPICRLTAVEMQTRQEPSEILQE--EEILVEDTVPKQLS--AKINNKPLSVLIDTGS 208
E++ ++ S L++ E+++++ T K + I + + V ID+G+
Sbjct: 96 ------------ELEELEQDSYTLRQGMEQLVIDLTRNKGMRFYGFILDHKVVVAIDSGA 143
Query: 209 THNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDF 268
T N++ LA L L T V +G + I+S G C ++ +Q V +F +LD
Sbjct: 144 TDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDL 203
Query: 269 SR--ADAVLGVQWLEKLGKIITDHKALTMEFTY 299
++ D +LG +WL KLG+ + + + F++
Sbjct: 204 AKTDVDVILGYEWLSKLGETMVNWQNQDFSFSH 236
>gi|224114898|ref|XP_002332257.1| predicted protein [Populus trichocarpa]
gi|222832022|gb|EEE70499.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 123/314 (39%), Gaps = 45/314 (14%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP---- 67
+L E ++ + RFG I KL Q +++ Y FE + + + +L+P
Sbjct: 74 SLIEWEEFSQDLCRRFGSKDDIVEEFN--KLIQDENMDDYIERFEELRSLMGDLNPLLPE 131
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPI-- 125
+ FISGLK I+ L I KP+ + A AK E+ + +K+ S + +N P
Sbjct: 132 AYYVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQRSNPPFHS 191
Query: 126 -------------PTTTRN---------ETNIRLNPLLPLP----PPNPSNPPKIALPIC 159
P+ T+ E +L P + N + +
Sbjct: 192 GRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHMIEG 251
Query: 160 RLTAV---------EMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLI--DTGS 208
MQ + E L ++ + K N + +++I D+GS
Sbjct: 252 VEGGEDEEIGEFEDNMQGTDQIDEYGLSLNALADNDTYNTIRIKGNCQGQNLIILIDSGS 311
Query: 209 THNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDF 268
TH++++ L+ KT V V NG + E HC + M F+++ +L+
Sbjct: 312 THSFINESTIKALNATTSKTTLLAVTVANGNVMLCEKHCPAFTWFMHNYEFKSNLRVLEL 371
Query: 269 SRADAVLGVQWLEK 282
R D VLGV WL+K
Sbjct: 372 GRHDLVLGVDWLKK 385
>gi|224108127|ref|XP_002333429.1| predicted protein [Populus trichocarpa]
gi|222836623|gb|EEE75016.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 123/314 (39%), Gaps = 45/314 (14%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP---- 67
+L E ++ + RFG I KL Q +++ Y FE + + + +L+P
Sbjct: 74 SLIEWEEFSQDLCRRFGSKDDIVEEFN--KLIQDENMDDYIERFEELRSLMGDLNPLLPE 131
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPI-- 125
+ FISGLK I+ L I KP+ + A AK E+ + +K+ S + +N P
Sbjct: 132 AYYVSSFISGLKDEIKPMLKILKPARVLVAFEQAKWQEEANNALTKKTRSLQRSNPPFHS 191
Query: 126 -------------PTTTRN---------ETNIRLNPLLPLP----PPNPSNPPKIALPIC 159
P+ T+ E +L P + N + +
Sbjct: 192 GRIPGNAPSKYFGPSRTKGVKPFSDSLYEQRKKLGQCFKCGDKYMPGHRCNSKGLHMIEG 251
Query: 160 RLTAV---------EMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLI--DTGS 208
MQ + E L ++ + K N + +++I D+GS
Sbjct: 252 VEGGEDEEIGEFEDNMQGTDQIDEYGLSLNALADNDTYNTIRIKGNCQGQNLIILIDSGS 311
Query: 209 THNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDF 268
TH++++ L+ KT V V NG + E HC + M F+++ +L+
Sbjct: 312 THSFINESTIKALNATTSKTTLLAVTVANGNVMLCETHCPAFTWFMHSYEFKSNLRVLEL 371
Query: 269 SRADAVLGVQWLEK 282
R D VLGV WL+K
Sbjct: 372 GRHDLVLGVDWLKK 385
>gi|242077302|ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
gi|241939770|gb|EES12915.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
Length = 797
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ ++ + PL L+DTGSTHN++ A L I+ V NGE++ G
Sbjct: 411 QVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQPRLTAMVANGEKVPCLGVIKH 470
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ F D ++ + D VLG QW+ LG+++ D ++ F ++G
Sbjct: 471 APIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWDFVDGSVTFQHQG 522
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RFGP L + +T +VE Y + F+ + R L + F GL+P + +
Sbjct: 199 RFGPPLRSAPMFELAECRRTRTVEEYANRFQALLPRAGRLDEAQRVQLFTGGLRPPLSST 258
Query: 86 LAIHKPSNLRDAIALAKLIE 105
+ +H P +L AI+LA+ +E
Sbjct: 259 VRLHNPDSLAAAISLARQVE 278
>gi|147840922|emb|CAN73185.1| hypothetical protein VITISV_028246 [Vitis vinifera]
Length = 674
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++A I ++ + LID G THN+L ++A FL L + T SF + V + ER+ +GH K
Sbjct: 408 RVAAAIGSQHMIALIDNGFTHNFLSEKVARFLRLLMVPTKSFAIHVASSERLLCQGHFEK 467
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKAL 293
V+ +QG+ F + L +R D G W + D++AL
Sbjct: 468 VQMNLQGITFSFTLYSLPLTRLDMKNGT-W-----RFCIDYRAL 505
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 13/114 (11%)
Query: 2 TNEDMQTRYRALEEQAALT------RAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTF 55
T+ Q RA +E++ L + + FGP+ N TL ++ Q S+ YQ F
Sbjct: 274 TDNQKQWLRRAYQEESPLVTWEFFEEELWASFGPTKCENFDETLSRVQQVRSLCEYQKEF 333
Query: 56 ENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
E + NRV A++ F+ LK I + + I++ ++++KLQ
Sbjct: 334 ERLGNRVQGWTQKALVGTFMGRLKSEIADGIRINQTKEY-------DVVDEKLQ 380
>gi|255550984|ref|XP_002516540.1| conserved hypothetical protein [Ricinus communis]
gi|223544360|gb|EEF45881.1| conserved hypothetical protein [Ricinus communis]
Length = 222
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQN 84
+RFGP+ N L ++TQ S+ YQ FE + N+V A++ FI GLKP I
Sbjct: 88 ARFGPTECENFDEALSRVTQRGSLRDYQKEFEKLGNKVQGWTQRALVGTFIGGLKPEIAE 147
Query: 85 ELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISW---KPTNTPIPTTTRNETNIRLNPLL 141
+ + K +L++AI+LA++ +++L +W +P N P T
Sbjct: 148 GIRMFKLQSLKEAISLARMRDEQLIR------TWRLTRPLNKPTVETI------------ 189
Query: 142 PLPPPNPSNPPKIALPICRLTAVEMQTRQ 170
S+ KI RL+ EMQ R+
Sbjct: 190 ------TSDAAKITPATKRLSWEEMQKRR 212
>gi|116309032|emb|CAH66146.1| OSIGBa0114M03.4 [Oryza sativa Indica Group]
Length = 1448
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 53/112 (47%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q++ + L L+D+GSTHN++ A L +++ V NGER+ G
Sbjct: 340 QVAVTLGTASLVALLDSGSTHNFISEAAAQRSGLPLQQRPRLTAMVANGERVTCIGVIRG 399
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ G F AD ++ + D VLG +WL LG I+ D M F ++G
Sbjct: 400 APLTIGGNSFPADLFVMPLAGYDVVLGTRWLGALGPIVWDLATRKMTFQHRG 451
Score = 42.0 bits (97), Expect = 0.36, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
R+GP A L + +T +V YQ F+ + R L D + F GL P + +
Sbjct: 134 RYGPPLRSAPLAELAECRRTGTVAEYQDRFQALLARAGPLEEDQRVQLFTGGLLPPLSID 193
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQ 109
+ I P +L A++LA+ E + Q
Sbjct: 194 VRIQNPQSLAAAMSLARQFELREQ 217
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 46/103 (44%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN L L+D+GSTHN++ L + L + VAV NG +I G C +
Sbjct: 1279 INGIQLMALVDSGSTHNFIAAELIDKVGLKLAPRTGLSVAVANGNKITCGGVCYTTPISI 1338
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
F D + D VLGVQWL LG I D LTM
Sbjct: 1339 DHEHFVLDLLTIPLGGFDIVLGVQWLRSLGPITWDFSNLTMRL 1381
>gi|255563126|ref|XP_002522567.1| conserved hypothetical protein [Ricinus communis]
gi|223538258|gb|EEF39867.1| conserved hypothetical protein [Ricinus communis]
Length = 174
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 28 GPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELA 87
G Y + L +L QTS+V AYQ FE + +++ L ++ CFI+GL+ I+ ++
Sbjct: 12 GIDDYEDPSEALTRLRQTSTVAAYQKAFEKLYHQIDGLPEGFLVGCFIAGLRDEIRLDVK 71
Query: 88 IHKPSNLRDAIALAKLIED--KLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPP 145
I +P L DAI + +L+E+ +LQ + ++P T + + + + L P P
Sbjct: 72 IKQPKTLADAIGVTRLVEERNRLQKKSPDPSRFQPATTASKINSTSASGV-LGPR----P 126
Query: 146 PNPSNPPKIALPIC--RLTAVEMQTRQE 171
NP A P R+T E++ RQE
Sbjct: 127 VQRGNPNANANPTTFRRITNQEVRERQE 154
>gi|147779107|emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
Length = 1593
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 2 TNEDMQTRYRAL-EEQAALTRAI-----ESRFGPSSYINHRATLFKLTQTSSVEAYQSTF 55
NE Q RA EE+A +T + +RFG + + L K+ Q + YQ F
Sbjct: 128 ANEWWQATKRAYAEEEAEITWEVFEEELWARFGSTECEDFDEALSKIKQAGTFRDYQREF 187
Query: 56 ENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
E + N+V A++ F+ GL P+I + + + +P +L++AI+LA++ +++LQ
Sbjct: 188 ERLVNKVQGWTQKALVGTFMGGLHPSIADGIRMFRPKSLKEAISLARMKDEQLQ 241
>gi|242070717|ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
gi|241936478|gb|EES09623.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
Length = 1507
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
L L+D+GSTHN++ A L + + V NGER+ +G + GV F
Sbjct: 428 LVALLDSGSTHNFISAAAARRSGLPLRQRPRLTALVANGERVTCDGVIRDAPLLIDGVTF 487
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
AD ++ + D VLG +WL LG I+ D + M F + G
Sbjct: 488 PADLFVMPLAGYDVVLGTRWLGALGPIVWDLSSRRMTFQHLG 529
>gi|449474333|ref|XP_004154142.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
Length = 566
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 111/282 (39%), Gaps = 59/282 (20%)
Query: 69 AILDCFISGLKPTIQNELAIHKPSNLRDAIALA----------KLIEDKLQ----SYNQK 114
+LD F++GL+P++Q E+ P L D + A KL ++L N+
Sbjct: 5 VLLDAFLTGLEPSLQAEVISRHPQTLEDCMREAQLVNDRNVALKLAMEELDIVEPKRNEN 64
Query: 115 SISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSE 174
S ++ N T ++ + +PL P PI RL+ E + R +
Sbjct: 65 SSKFQGKNEK--TESKKTEFVMKQVTIPLKNDYQKKDP----PIKRLSDTEFRARLDKGL 118
Query: 175 ILQEEE-------------------ILVEDTVPKQ----------------LSAKINNKP 199
+ E IL E+ K+ L ++N P
Sbjct: 119 CFKCNEKYSPGHRCKGREKRELMLLILNEEEDHKREEDAEDEASEVIELNHLELNMDN-P 177
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
+ + + TG T H L+I+ F V +GNG + G C +VK +++ +
Sbjct: 178 IELRLITGVTSKRTKKLKGH---LSIDLGTRFGVTIGNGNQCEGSGICKRVKVKLKELTI 234
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
ADF ++ D VLG+QWL+ G + +LTM F KG
Sbjct: 235 VADFLAVELGTVDLVLGMQWLDSTGTMKVHWPSLTMTFWTKG 276
>gi|242085372|ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
gi|241943804|gb|EES16949.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
Length = 1456
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 54/112 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ ++ + PL L+DTGSTHN++ A L I+ V NGE++ G
Sbjct: 352 QVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQPRLTAMVANGEKVPCPGVIKH 411
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ F D ++ + D VLG QW+ LG+++ D ++ F ++G
Sbjct: 412 APIAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWDFIDGSVSFQHQG 463
Score = 43.9 bits (102), Expect = 0.099, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RFGP L + +T +VE Y + F+ + R L + F GL+P + +
Sbjct: 140 RFGPPLCSAPMFELAECRRTGTVEEYANRFQALLPRAGRLDEAQRVQLFTGGLRPPLSST 199
Query: 86 LAIHKPSNLRDAIALAKLIE 105
+ +H P +L AI+LA+ +E
Sbjct: 200 VRLHNPDSLAAAISLARQVE 219
>gi|356551468|ref|XP_003544097.1| PREDICTED: uncharacterized protein LOC100808479 [Glycine max]
Length = 600
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
V NG + C+ V +QG F DFH++ + AD VLGVQWL+ LG I+ ++ LT
Sbjct: 2 VRNGNELDCLHLCNNVSIHVQGHVFIVDFHVMSLTGADLVLGVQWLKSLGLILKNYSDLT 61
Query: 295 MEFTYKG 301
M+F + G
Sbjct: 62 MQFFHTG 68
>gi|255560078|ref|XP_002521057.1| conserved hypothetical protein [Ricinus communis]
gi|223539760|gb|EEF41341.1| conserved hypothetical protein [Ricinus communis]
Length = 211
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RFGP + N L KL QT SVE +Q FE + + +L + + FI GL+ I E
Sbjct: 97 RFGPPTGSNKLGELSKLKQTGSVEQFQRQFEKLSAQTASLTSEQGMQIFIGGLREDIAVE 156
Query: 86 LAIHKPSNLRDAIALAKLIEDKL 108
+ +H P +L A++LA+L E ++
Sbjct: 157 VKLHNPPDLSTAMSLAQLYERRI 179
>gi|242085390|ref|XP_002443120.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
gi|241943813|gb|EES16958.1| hypothetical protein SORBIDRAFT_08g009530 [Sorghum bicolor]
Length = 1574
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 53/111 (47%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
L + + L L+DTGSTHN+L L L+ V V NG+R+ EG V
Sbjct: 549 LPVLVKGERLLALLDTGSTHNFLRGTTMRRLGLSPAGGEQLRVTVANGDRLPCEGIAHDV 608
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ G F LD D +LGV +L LG I+ D A+TM F+ +G
Sbjct: 609 PISIAGEVFSITCVGLDLGSFDLILGVDYLRTLGPILWDFGAMTMAFSRQG 659
>gi|242085388|ref|XP_002443119.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
gi|241943812|gb|EES16957.1| hypothetical protein SORBIDRAFT_08g009520 [Sorghum bicolor]
Length = 1595
Score = 62.0 bits (149), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 53/111 (47%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
L + + L L+DTGSTHN+L L L+ V V NG+R+ EG V
Sbjct: 549 LPVLVKGERLLALLDTGSTHNFLRGTTMRRLGLSPAGGEQLRVTVANGDRLPCEGIAHDV 608
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ G F LD D +LGV +L LG I+ D A+TM F+ +G
Sbjct: 609 PISIAGEVFSITCVGLDLGSFDLILGVDYLRTLGPILWDFGAMTMAFSRQG 659
>gi|77551042|gb|ABA93839.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 852
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 123/303 (40%), Gaps = 32/303 (10%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCF 74
+ A+ +F + + + + + QT SV + F+++ N++ P ++ F
Sbjct: 147 FSEAVNQKFDHNQHQHLIRQIDHIKQTGSVSEFYERFDDLMNQLLVYDPTYNTLNLVHRF 206
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETN 134
GL I++ + +H+P +L A+ LA L++++L + + S K + +
Sbjct: 207 TEGLHADIRHSVLMHRPVDLESALVLA-LLQEELVDAAKTTESRKFGD--------HGAK 257
Query: 135 IRLNPLLPLPPPN----------PSNPPKIALPICRLTAVEMQTRQEPSEILQEEEIL-- 182
+ LPLPP ++ KI + S+ + +L
Sbjct: 258 FKGAYSLPLPPSKTIVFPDRGVYKADEKKIVDGQRSVQTSADDHSSCSSDDNDQATLLAL 317
Query: 183 -------VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAV 235
+ + K+L KI + + +L+D+GS+ ++L A L V V
Sbjct: 318 SIHAIQGIVSSSTKRLHGKIQGRDVLILVDSGSSTSFLSVAFADQLEGVQPLRRPLSVKV 377
Query: 236 GNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
NGE +R + QG GF F ++ DA+LG+ WL + + D +A T+
Sbjct: 378 ANGEMLRCLTELPNTVWSAQGFGFCTTFKVITMGGYDAILGMDWLTQHSPMDIDWQAKTI 437
Query: 296 EFT 298
T
Sbjct: 438 RLT 440
>gi|242033109|ref|XP_002463949.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
gi|241917803|gb|EER90947.1| hypothetical protein SORBIDRAFT_01g009436 [Sorghum bicolor]
Length = 1450
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ ++ + PL L+DTGSTHN++ A L I+ V NGE++ G
Sbjct: 411 RVRVRVGSTPLIALLDTGSTHNFIAETAAARSGLPIQSQPRLTAMVANGEKVPCPGVIKN 470
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ F D ++ + D VLG QW+ LG+++ D ++ F ++G
Sbjct: 471 APLAIHDSVFAVDLFVMPLAGHDLVLGTQWMATLGRLVWDFVDGSVSFQHQG 522
Score = 43.9 bits (102), Expect = 0.080, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 26 RFGPSSYINHRATLFKLTQ---TSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
RFGP A +F+L + T +VE Y + F+ + R L + F GL+P +
Sbjct: 199 RFGPPL---RSAPMFELAECRRTGTVEEYANRFQALLPRAGRLDEAQRVQLFTGGLRPPL 255
Query: 83 QNELAIHKPSNLRDAIALAKLIE 105
+ +H P +L AI+LA+ +E
Sbjct: 256 SGTVRLHNPDSLAAAISLARQVE 278
>gi|110289660|gb|AAP55181.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1459
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 118/295 (40%), Gaps = 49/295 (16%)
Query: 40 FKLTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
F + Q SV Y F+++ +++ +L P + FI GL+ I+ + + +P +L
Sbjct: 439 FHIKQEGSVSEYVEKFDSLMHQLLAYYNSLLPVYFVTKFIEGLRSDIRMVVLVQRPQDLD 498
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIA 155
++A L E+ ++ + +P N+ + IR N P+ S P KI
Sbjct: 499 STCSVALLQEEAMEGVKFQGYK-RPNNSVM---------IRNNSPAPIVG-QASTPQKIF 547
Query: 156 LPIC---------------RLTAVEMQTR-------------QEPSE------ILQEEEI 181
P RL+A++ R QE E I Q+
Sbjct: 548 SPQITEDRRGTEAARARDDRLSALKSYRRSKGLCFTCGEKWEQEIDEVGDLMSISQQAVW 607
Query: 182 LVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERI 241
E + +L + L +LID+GSTH+++ + + V + +G +
Sbjct: 608 GTESSRSIRLIGWVQGTELLMLIDSGSTHSFMDETVGSKMVGVSPLRKPLSVQLADGGSL 667
Query: 242 RSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTME 296
+ K+ MQG F ++F +L+ D +LG+ WLE+ + D ME
Sbjct: 668 LCSHEIANCKWWMQGHSFSSNFRLLNLGGYDIILGMDWLEQFSPMQVDWSQKWME 722
>gi|147786921|emb|CAN64438.1| hypothetical protein VITISV_011230 [Vitis vinifera]
Length = 361
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 107/288 (37%), Gaps = 89/288 (30%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
ED + EE+ I RFGP+ + L K+ Q S+ YQ FE + NRV
Sbjct: 108 EDRVVTWELFEEE------IWVRFGPTECEDFDEALSKVRQIGSLHDYQKEFERLGNRVH 161
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNT 123
A++ F++ NL DKL S+ ++ + N
Sbjct: 162 GWSQKALVGSFMA---------------QNLEGG--------DKLGSHEGRTTTTPKXNL 198
Query: 124 PIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQE------------ 171
TT + PL P + A P+ RL+ EMQ R+
Sbjct: 199 TATTTYSH----------PLALPTTTK----ASPVKRLSWEEMQKRRAQGLCFNCDDKST 244
Query: 172 -------PSEILQEEEI-------------------------LVEDTVPK--QLSAKINN 197
P +L E I L T K +++AKI
Sbjct: 245 SGHRCKGPQLLLLEGNINDDSEGDTKEAEADLPSDPEISLHALTGWTATKTMRVTAKIGT 304
Query: 198 KPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEG 245
+ VLID+GSTHN++ ++A LHL + T F V V NG+ ++ +G
Sbjct: 305 HDIVVLIDSGSTHNFISDKVAALLHLPVVPTAPFHVRVANGQPLKCQG 352
>gi|147799941|emb|CAN70500.1| hypothetical protein VITISV_020483 [Vitis vinifera]
Length = 672
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I + +L+D G TH++L L L L + T S+ V +G G ++ + C
Sbjct: 146 KIKGTIGSNEXIILVDYGVTHDFLFLDLVQRLALPLTTTTSYGVVMGIGISMKGKSICKG 205
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
V MQG+ DF L+ D +LG+ WL LG + + LT++
Sbjct: 206 VCISMQGLIVVEDFVPLELGSTDVILGMPWLGTLGDVEVNWNMLTIKI 253
>gi|449523988|ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225033 [Cucumis sativus]
Length = 307
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++ + K + +L+D G+THN + +L L L + T ++ V +G+G I+ +G C
Sbjct: 179 KVNGWLQGKEVIILVDRGATHNLISEKLVKELQLNTKDTSNYAVILGSGTTIKGKGVCEA 238
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTME 296
V+ + +F L+ D +LG+QWL LG IT+ LTME
Sbjct: 239 VELMIGDWRVIDEFLPLELGGVDVILGMQWLYSLG--ITE--VLTME 281
>gi|31432119|gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 8/139 (5%)
Query: 171 EPSEILQEEEILVED------TVPKQLSA--KINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
E +E +QEE + + T P S K+N K L+D+GST ++ + A
Sbjct: 483 EQTENVQEELMSISQSAVYGLTRPDTFSVMIKVNGKKAVGLVDSGSTTTFMDSKFAIKSQ 542
Query: 223 LAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
+E T V V G ++SE +++E+QG F F++L R D +LG W+ K
Sbjct: 543 CTLENTKMRKVIVAGGGELKSELIVPGMEYEIQGESFTNSFNLLSLERYDIILGADWIFK 602
Query: 283 LGKIITDHKALTMEFTYKG 301
I D + M+ T G
Sbjct: 603 YSPITLDLRKREMKITKGG 621
>gi|255573324|ref|XP_002527589.1| conserved hypothetical protein [Ricinus communis]
gi|223533028|gb|EEF34791.1| conserved hypothetical protein [Ricinus communis]
Length = 322
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 2/107 (1%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A++ RFG +Y + A L L QT +++ Y +FE + ++VT L D L CF+SGLK
Sbjct: 190 ALKGRFGEKAYEDPMADLKGLIQTGTLQEYMESFEVLSHKVT-LSEDYSLSCFLSGLKEE 248
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQ-KSISWKPTNTPIPT 127
I+ L + P +L+ A ALA++ + L + K I P IPT
Sbjct: 249 IRIPLRMLGPKSLQQAYALARMQDSYLSATKTIKPIIINPKQPVIPT 295
>gi|255555239|ref|XP_002518656.1| conserved hypothetical protein [Ricinus communis]
gi|223542037|gb|EEF43581.1| conserved hypothetical protein [Ricinus communis]
Length = 177
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ N+ + L+++GSTH++LH R+ L+ + + F V+ G G ++ S C +++M
Sbjct: 58 VENQHVLNLLNSGSTHSFLHNRVVEKLNCNLVQATPFCVSTGGGNKLISNQKCLNFEWKM 117
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITD 289
+ F +F +L+ D VLG W+ + D
Sbjct: 118 NNLSFSFNFRLLNIDEYDLVLGADWMRSFNHVYFD 152
>gi|32483242|emb|CAE02543.1| OSJNBb0069N01.1 [Oryza sativa Japonica Group]
gi|38344504|emb|CAE05183.2| OSJNBa0013A04.20 [Oryza sativa Japonica Group]
Length = 1395
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ + L LID+GST +L A + + V V NG+++ G + F++
Sbjct: 401 LGDTDLYALIDSGSTPTFLSQDAAARVGRDPQPRSGLNVTVANGDKVACPGVFPDMPFQI 460
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
G F D ++L D VLG QWL LG I+ D ALTM F ++
Sbjct: 461 AGEEFATDVYVLTLGGYDLVLGTQWLATLGPILWDFTALTMSFWHR 506
>gi|24414261|gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
gi|108706657|gb|ABF94452.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1021
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 122/313 (38%), Gaps = 67/313 (21%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHPDAILDC------FISGLKPTIQNELAIHKPSNLR 95
+ Q SV Y F+ + N++ L D +L+ F +GL+ I+N + + +P +L
Sbjct: 318 IKQIGSVWEYYEKFDELMNQL--LVYDPLLNIRYLTHRFTAGLRREIRNAVLLQRPKDLE 375
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPL------LPLPPPNP- 148
A+A+A L Q+ + + P T N +R NP LPLPP
Sbjct: 376 TALAIASL---------QEEVMLESVIGSNPKRTDNGLQVRPNPAFKSALPLPLPPTRGM 426
Query: 149 --------------------SNPPKIALPICRLTAVEMQTR---------QEPSEILQE- 178
+N KI+ + +L AV+ QE E L+E
Sbjct: 427 QVGMVSRTADHKGNDNSKMVNNADKIS--VLKLHAVQELINTLGCDDIPDQEQLEQLEEY 484
Query: 179 ----------EEILVEDTVP-KQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK 227
+ I +TV ++ I K + +L+D+GST ++L ++A L
Sbjct: 485 DNPDLIAISVQAIHGSETVGCMRMLGYIQGKEVLILVDSGSTTSFLSSQIAQKLTGVTPL 544
Query: 228 TMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V V NG + + QG F F +LD D +LG+ WL +
Sbjct: 545 VAATRVKVANGTILNCVASVPNCDWMTQGWVFCTTFKVLDLGSYDMILGMDWLMDHSPMQ 604
Query: 288 TDHKALTMEFTYK 300
D T+ T++
Sbjct: 605 VDWIQKTLTITWR 617
>gi|38346427|emb|CAD40214.2| OSJNBa0019J05.12 [Oryza sativa Japonica Group]
Length = 1817
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 133/332 (40%), Gaps = 78/332 (23%)
Query: 40 FKLTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
F + Q SV Y F+++ +++ +L P + F+ GL+ I+ + + +P ++
Sbjct: 386 FHIRQDGSVAEYVEKFDSLMHQLLAYDNSLLPVYFVTKFVEGLRSDIRVVVLVQRPQDMD 445
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP--LPPPNPSNPPK 153
A A+A L E+ L+ +S +K +T IP ++ +LP LPP +P
Sbjct: 446 SACAVALLQEEALEGV--QSTQYKKPDTSIPIRNSHKGA----GVLPSTLPPKQLLSPQS 499
Query: 154 ----------------IALPICRL-------------------TAVEMQTRQEPSEILQ- 177
AL R TAV++ QE + LQ
Sbjct: 500 EDRRGTESARARDDKLSALKAYRRSKGLCFTCGERWSRDHKCSTAVQLHVVQELLDALQD 559
Query: 178 ---------EEEILVEDT-----VPKQ------------LSAKINNKPLSVLIDTGSTHN 211
E+ + EDT + +Q L + L +L+D+GSTH+
Sbjct: 560 VKTVEVSDGEQFLHCEDTSDLMAISQQAIWGTESPNSFRLRGWVQGTELLMLVDSGSTHS 619
Query: 212 YLHPRLAHFLHLAIEKTM--SFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269
++ + L LA K + V + +GE + + ++ MQG F +F +L+
Sbjct: 620 FMEESIG--LKLAGVKPLRSKLSVKLADGETLSCSYEVTNCRWWMQGHNFINNFRLLNLG 677
Query: 270 RADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
D +LG+ WLE+ + + M+ T G
Sbjct: 678 GYDIILGMDWLEQFSPMQVNWVDKWMDITISG 709
>gi|32492359|emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 112/303 (36%), Gaps = 56/303 (18%)
Query: 47 SVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102
+VE Y FE + V HP + CFI GL+ I++++ HKP L ++ K
Sbjct: 299 TVEQYIDKFEEYVDLVRREHPYLQEQYLNSCFIGGLRGDIKHDVCGHKPQGLLESYWYTK 358
Query: 103 LIE------DKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNP------------LLPLP 144
E L ++N+ N P RN N R P
Sbjct: 359 NYERAANARKNLLNFNRNRFQ----NQAGPIQGRNVVN-RGQPREQVEKKEERKCWFCKE 413
Query: 145 PPNPSNPPKIALPI----------------CRLTAVEMQTRQE-----PSEILQEEEILV 183
P P + K+ + LT + + E P + QEE + V
Sbjct: 414 PWFPKHQCKVKKALNALLMEGEEGKDEGEEGELTGNQEDCKLEKEEAPPDDENQEELMFV 473
Query: 184 ED------TVPKQLSA--KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAV 235
T P S +IN + L+D+GST ++ A H + T + V V
Sbjct: 474 SHNAVYGTTRPDTFSVIIQINGRRAVGLVDSGSTSTFMDQDYAVRNHCPLVSTDAKKVVV 533
Query: 236 GNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
G ++SE ++ +++QG F F+I+ D +LG W+ K I D K +
Sbjct: 534 AGGGELKSEVQVPELVYQIQGETFSNKFNIIPLKGYDVILGADWIYKYSPITLDLKKREL 593
Query: 296 EFT 298
T
Sbjct: 594 GIT 596
>gi|147837833|emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
Length = 1357
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 121/305 (39%), Gaps = 78/305 (25%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQN 84
S FG + + A L L QT S+++Y F+ + R ++ L F+SGL +Q
Sbjct: 125 SGFGQHVFDDPIADLRNLRQTGSLQSYMDEFDELYPRA-DIKESHALSFFLSGLIDELQM 183
Query: 85 ELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTN------TPIPTTTRNETNIRLN 138
+ R A+A +++K + ++ + PT TPI + ++N TN+
Sbjct: 184 PIT-------RKAVAA---LQNKPKPVSKGPSLYSPTTNHYHKATPITSISQNATNLSNT 233
Query: 139 P--------LLPLPPPN--PSNPPKI-----------------ALPIC------------ 159
LLPLPP P P I A +C
Sbjct: 234 TFPKTTNAGLLPLPPSTNIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHK 293
Query: 160 ----RLTAVEMQTRQE---PSEILQ-------EEEILV--------EDTVPKQLSAKINN 197
+L +++Q + P LQ +E+I + ED+ L+
Sbjct: 294 CKRKQLYVMQIQVETDGEGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQTMTLNGNYKG 353
Query: 198 KPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257
+ L VLID+GS+HN+L ++A + +K V V NG + CS ++ MQG
Sbjct: 354 RSLFVLIDSGSSHNFLSSKVAKRVDCCWQKARGIRVTVANGHELHCTALCSDFRWRMQGQ 413
Query: 258 GFEAD 262
F A+
Sbjct: 414 EFIAE 418
>gi|38568037|emb|CAD40411.3| OSJNBa0065J03.7 [Oryza sativa Japonica Group]
Length = 1414
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 51/259 (19%)
Query: 44 QTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIA 99
QT SV Y F+++ +++ L P L F+ GLK I+ + + +P + +
Sbjct: 229 QTGSVTEYVERFDSLMHQLLAYDNALTPRYFLTKFVDGLKDDIRGAVMLQRPEEILEG-- 286
Query: 100 LAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPIC 159
S KP+ T N+ R P P+ PK
Sbjct: 287 -----------------SRKPSYRKSDGTNFNKVFSR--------PTQPTVWPK------ 315
Query: 160 RLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAH 219
P++ ++ L+E + ++ I L +LID+GS+H++L +
Sbjct: 316 -----------SPAQTTGDDRKLIE-SGKIRVKGLIQGTKLLMLIDSGSSHSFLDENIVQ 363
Query: 220 FLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQW 279
+ V V +GE + + + +QG + +F +L DA+LG+ W
Sbjct: 364 TMQGVTSLPQPVKVKVASGEVLICDKQLPDYAWWLQGRCYRTNFKLLSLPGYDAILGIDW 423
Query: 280 LEKLG--KIITDHKALTME 296
L+ LG +II K L E
Sbjct: 424 LQGLGVMRIIWVQKWLEYE 442
>gi|357130317|ref|XP_003566796.1| PREDICTED: retrotransposon-derived protein PEG10-like [Brachypodium
distachyon]
Length = 717
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 185 DTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
DT+ +L + NK L +LID+GS+H+++ L L+ ++ V V NG ++ +
Sbjct: 403 DTI--RLRCLVGNKVLIMLIDSGSSHSFIDSHLLTSLNYSVVPIPLTAVKVANGAVLQCD 460
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
S + + +Q F+ DF ++ DA+LG+ WL++ G +
Sbjct: 461 SKVSGLTWWVQHHTFQYDFRVVQLGEYDAILGMDWLKQWGAM 502
>gi|449475049|ref|XP_004154359.1| PREDICTED: uncharacterized protein LOC101211870, partial [Cucumis
sativus]
Length = 674
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI + + VLID G+THN++ +L L L + T ++ V G+G I+ G C K
Sbjct: 161 KVRGKIQGREVIVLIDCGATHNFISDKLVLMLKLNTKDTSNYGVIFGSGTAIKGRGICEK 220
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
V+ ++ G EA I+D R + EK+ ++ +K
Sbjct: 221 VEVDLDGRALEA--RIIDIGRQEEEAANTRQEKVQSVLARYK 260
>gi|284434698|gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 106/297 (35%), Gaps = 52/297 (17%)
Query: 47 SVEAYQSTFENICNRVTN---LHPDAI-LDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102
S+ Y FE + + P+A + CFI+GL+ I++ L KP L +A +AK
Sbjct: 44 SISDYIDRFEELMAAYKGENPMQPEAFFVKCFINGLRQDIKHYLKPLKPQVLCEAYWMAK 103
Query: 103 LIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIAL--PICR 160
+E + ++ +S NT N R+ + N P ICR
Sbjct: 104 DMEKGAGAVARRGMSSSVVNTQKGGYNANLAKNRVQSVQNFQKKEVGNKPNTPFIPGICR 163
Query: 161 -------------------LTAVEMQTRQEPSEILQEE-----EILVEDTVPKQ------ 190
L E + P+ +++ E VE+T P +
Sbjct: 164 YCGDKWFLGHRCKQYQQVNLMVSETEETAHPNVETEDDPPDTNECTVEETDPPEQLMHMQ 223
Query: 191 ----------------LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVA 234
+ KI + L+D+GSTH ++ R A I V
Sbjct: 224 VSSQAVQGYSRFTTYTVEVKIGGRRGIALLDSGSTHTFMDLRFATKTTCRIMCNNLMKVT 283
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
V G I + H +VK+ + G F F IL D VLG W+ + I D K
Sbjct: 284 VAGGGSILTGSHVPEVKYSINGQVFCNSFKILKLKNYDMVLGCDWMYQHSPINIDLK 340
>gi|449531517|ref|XP_004172732.1| PREDICTED: uncharacterized protein LOC101232451 [Cucumis sativus]
Length = 392
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI + VLID G+TH+++ L L L + +T + V +G+G ++ +G C +
Sbjct: 55 KVKGKIQGTEVVVLIDCGATHSFIVDNLVTSLKLPLTETSNCGVILGSGAAVKGKGICGQ 114
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
V+ + F L+ D +L +QWL LG + + L M F ++G
Sbjct: 115 VEVMVGEWKIVDSFLPLELEGVDVILDMQWLHSLGVTEFNWRKLVMTFQHEG 166
>gi|224123438|ref|XP_002330315.1| predicted protein [Populus trichocarpa]
gi|222871350|gb|EEF08481.1| predicted protein [Populus trichocarpa]
Length = 528
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ + L + I +GSTH+++ L++A KTM V V NG + E
Sbjct: 408 RIKGNCQGRDLIIFIVSGSTHSFIDEGTITELNVAKSKTMLLAVTVANGTVMLCEMQSPG 467
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
+ MQG F+A+ +L R D +LGV WL++ ++ D L +
Sbjct: 468 FTWFMQGYEFKANLRVLKLDRHDIMLGVDWLKQYSPVLFDFIKLRL 513
>gi|224133300|ref|XP_002321533.1| predicted protein [Populus trichocarpa]
gi|222868529|gb|EEF05660.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ AK+ N + LID GSTH ++ ++ + + I V V + I SEG +
Sbjct: 127 RVRAKVGNLTIIPLIDIGSTHYFVPSKMTKRMGIEISAQRFMRVKVVDDTEINSEGEYAD 186
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
KF++Q F + +L D VLG+QWL++LG I+
Sbjct: 187 FKFKIQRNHFVSQAIVLPLGGYDVVLGIQWLQELGSIL 224
>gi|90399077|emb|CAJ86299.1| H0124B04.16 [Oryza sativa Indica Group]
Length = 1265
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 134/314 (42%), Gaps = 54/314 (17%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD-AILDC---FISGL 78
++ +F + ++ + +L Q+ SV Y F+++ +++ P + + C F GL
Sbjct: 255 VDRKFDRNRHLQLVRQIDQLKQSGSVNEYYERFDDLWSQLLVYDPTLSTMSCVHRFTEGL 314
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIED------KLQSYNQKSISWKPTNTPIPTTTRNE 132
+ I+N + +H P +L A+ALA L E+ L S + K + +
Sbjct: 315 RSDIKNAVLMHFPQDLETALALAILQEELGEAGGSLVSKDGKKLG------------DHV 362
Query: 133 TNIRLNPLLPLPPPN-----------PSNPPKIALPICRLTAVEM-------------QT 168
I+ LPLPPP + PK + P+ +L AV+ Q
Sbjct: 363 ARIKGAYPLPLPPPKFVHAGKGDDKRAAEVPKCSGPV-QLHAVQELFSVLAADVSDGEQD 421
Query: 169 RQEPSEILQEEEILVEDTVPK---QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI 225
S ++ ++ TV +L I + +L+D+GS+ ++L + HL
Sbjct: 422 ADSTSSLMAISLQAIQGTVSAHTLRLQGSIQGFDVLILVDSGSSCSFLSSVV--LPHLTG 479
Query: 226 EKTM--SFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKL 283
K++ V V NG + K+E+QG F +F +L D +LG+ WLEK
Sbjct: 480 VKSLLTPIQVKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKY 539
Query: 284 GKIITDHKALTMEF 297
+ + +A T++F
Sbjct: 540 SPMDINWQAKTIQF 553
>gi|108862432|gb|ABA97314.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1219
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 104/273 (38%), Gaps = 55/273 (20%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDA 97
+ QT V Y F+ + N++ P + F GL I+N + + +P +L +A
Sbjct: 238 IKQTGIVWEYYERFDELMNQLLTYDPLLNMRYLTHRFTEGLCREIRNTVLLQRPKDLENA 297
Query: 98 IALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNET-------NIRLNPLLPLP-PPNPS 149
+A+A L E+ + + T +P +++ N+ LPLP PPN
Sbjct: 298 LAVAMLQEEVIS---------EATTGSVPNLKKSDGGNLQIRPNVAFKGALPLPSPPN-- 346
Query: 150 NPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAK--------------- 194
R + + R E + L E + L A+
Sbjct: 347 ----------RGSGSGVLNRSEDRKFLHNTETGNSNDKISTLKAQRRAQFKLYKGFETVG 396
Query: 195 -------INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
+ K + +L+D+GST +++ ++A L + V V NG +
Sbjct: 397 CMRMLGYVQGKEVLILVDSGSTTSFITSKIAQTLQGVVTLEPPVQVKVANGSILTCLSSV 456
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
+ ++ QG F D +L+ D +LG+ WL
Sbjct: 457 LRCEWMTQGWVFYTDLKVLNLGSYDIILGMDWL 489
>gi|8778789|gb|AAF79797.1|AC020646_20 T32E20.30 [Arabidopsis thaliana]
Length = 1397
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 118/294 (40%), Gaps = 31/294 (10%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGL 78
L + RFG +LF + QT SV Y FE++ ++V L + F++GL
Sbjct: 192 LKSGLMLRFGNLKLRGPSQSLFCIKQTGSVAEYVQRFEDLSSQVGGLDDQKLEGIFLNGL 251
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLN 138
+Q + +HKP NL + +A+A+ +E S ++ + + + R R +
Sbjct: 252 TGEMQELVHMHKPQNLPEMVAVARSME---TSVMRRVVQKELQLVKLDEKRRKGICFRCD 308
Query: 139 PLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPK----QLSAK 194
P+ ++ + + EM+ + S EEE D+V + S+
Sbjct: 309 GPWSKEHKCPNKELRV---LTVINGFEMEVLESNS---VEEEF--HDSVAQFAELSFSSY 360
Query: 195 INNKPLSVLIDTGST--HNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
+ + + GS + H + +F + I +G G ++ G C KV
Sbjct: 361 MGLPSYTTIKMKGSICKGEWCHTQF-YFPNFHIR--------LGTGITVQGLGLCDKVTM 411
Query: 253 EM-QGVGFEAD----FHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ G G E + F LD D +LG+ WL LG + + + F Y G
Sbjct: 412 TLPVGCGQELELTTHFITLDLGPVDVILGIAWLRTLGDCKVNWERHELSFLYHG 465
>gi|147867132|emb|CAN82647.1| hypothetical protein VITISV_005196 [Vitis vinifera]
Length = 456
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 49/228 (21%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQN 84
+RFGPS + L ++ Q ++ YQ FE + NRV A++ F+ GLK I
Sbjct: 79 ARFGPSGSEDFDEALSRIRQLETLRDYQREFEKLSNRVRGWTQRALVGTFMGGLKAEIS- 137
Query: 85 ELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLP 144
D I + L+E + + + I +PT L
Sbjct: 138 -----------DGIQMFLLLEGHVGTMVCEDIIDQPT---------------------LE 165
Query: 145 PPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLS--AKINNKPLSV 202
+ ++ P E++ SEI + L T P+ + A++ + V
Sbjct: 166 EDQGGDIGEVQEP-------ELE-----SEI--KLHALTRWTGPRTMCIIARMGPHEVVV 211
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
L+D+GSTHN++ RL + L I +F V V NGE++R + KV
Sbjct: 212 LVDSGSTHNFISDRLENMPRLPIIHMEAFSVLVANGEKLRCQRLYDKV 259
>gi|147765520|emb|CAN60437.1| hypothetical protein VITISV_035177 [Vitis vinifera]
Length = 818
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 225 IEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
+++T + V + G ++ EG C V+ +QGV D LD +D +LG+QWLE LG
Sbjct: 252 LDETEGYGVLLKIGVSVKGEGVCRGVQLLLQGVKIVEDVMPLDLGGSDFILGMQWLETLG 311
Query: 285 KIITDHKALTMEF 297
KI + K LTM F
Sbjct: 312 KIKFNCKTLTMWF 324
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 16/129 (12%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT 63
ED +R+ E+ L + F P F L Q ++ Y+ FE + + +
Sbjct: 105 EDTHRPFRSWEDFKGL---LLEHFRPRDEEEMSERFFSLWQEGTLYEYRRDFERVTSTMD 161
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKP-------------SNLRDAIALAKLIEDKLQS 110
++ + FI+GL+P IQ EL H+P S + ++ KL++ +LQ
Sbjct: 162 DIPKRLLKGQFINGLRPDIQAELEAHRPTDNHRKTTLLEKTSGTKSEVSFRKLLDAELQM 221
Query: 111 YNQKSISWK 119
+K + ++
Sbjct: 222 KREKGLYYR 230
>gi|10140673|gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1608
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L + N L +L+D+GSTH+++ +L L + + V V +G ++ +
Sbjct: 440 RLRGWVQNTELLMLVDSGSTHSFIDAKLGAQLCGLQKLNQAIKVQVADGSQLFCDSFLPN 499
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ QG F +DF +L DA+LG+ WLE+ + D + F + G
Sbjct: 500 CSWWSQGHSFTSDFRLLPLGSYDAILGMDWLEQFSPMQVDWVHKWIAFQHHG 551
>gi|326497069|dbj|BAK02119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 57/112 (50%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L A++ ++ + LID+GSTH+++ A L + + + V + N +R+R + +
Sbjct: 50 RLRAQVGDQVMLFLIDSGSTHSFVSKAFATRLSVPMVTLPAVSVHMANSQRLRCDSMVQQ 109
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ +++ G F D +L+ D VLG+ WL + + T+ F +G
Sbjct: 110 LTWQVPGHTFHTDLRVLELGAYDGVLGMDWLSRHSPMNCHWLEKTISFQTEG 161
>gi|338808432|gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
P N P+ RL +E +E +QE ++ T P +++ VL D
Sbjct: 465 PGAGNRPQPRYNHGRLNHLE-------AEAVQETPDMIVGTFP------VDSHIAEVLFD 511
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEADFH 264
TG+TH+++ +L I TMS + + + G RIR++ C V E++G+ F A+
Sbjct: 512 TGATHSFITASWVEAHNLPI-TTMSTPIQIDSAGGRIRADSICLNVSVEIRGIAFPANLI 570
Query: 265 ILDFSRADAVLGVQWLEKLGKIITDHK 291
++ D +LG+ WL+K +I+ K
Sbjct: 571 VMGTQGIDVILGMNWLDKYQAVISCDK 597
>gi|449470397|ref|XP_004152903.1| PREDICTED: uncharacterized protein LOC101208187 [Cucumis sativus]
Length = 1969
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/300 (21%), Positives = 114/300 (38%), Gaps = 52/300 (17%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
Q R+R+ +E L + +RF + Q V+ Y FE + + +
Sbjct: 760 QKRFRSWKE---LNERMYNRFRSREQGTQCVRFLAIKQEGKVKDYLQRFEELSAPLVEIA 816
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALA-------KLIEDKLQSYNQKSISWK 119
D + F +GL P I+ E+ + L+D + A + + +LQ+ K + ++
Sbjct: 817 EDVLEGTFTNGLDPMIRTEVLSMRAVGLKDMMEAAQREPPFRRWTDSELQARRDKDLCYR 876
Query: 120 PTNTPIPTTTR-NETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQE 178
+ P R +RL L A ++
Sbjct: 877 -CDEPFSEGHRCKNKELRLY----------------------LVADDL------------ 901
Query: 179 EEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG 238
E+ ++ED K K+ P+ V + S + P L++ +T S+ + +G+G
Sbjct: 902 EDTVMEDIENK--GTKVEVSPV-VELSVNSVVGLMAP---EELNIPTAETTSYGIIMGSG 955
Query: 239 ERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ ++ +G C + + DF L+ D VLG+ WL K G + D K L M F
Sbjct: 956 KAVQGKGMCKGATVGLPVLTIVEDFLPLELGNLDMVLGMMWLRKQGAMTVDWKELAMTFV 1015
>gi|115446399|ref|NP_001046979.1| Os02g0522000 [Oryza sativa Japonica Group]
gi|113536510|dbj|BAF08893.1| Os02g0522000, partial [Oryza sativa Japonica Group]
Length = 380
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV----TNLHP 67
++E L + ++FG Y H L L QTS V+AY S FE + +RV
Sbjct: 212 SVETWPELCVVVHNKFGKDKYQEHLEELESLRQTSGVDAYYSKFEELMHRVLVYNQAFDE 271
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIED---KLQSYNQKS 115
+ F+ GLK I+ + +HKP + A++LAK ED +++ QKS
Sbjct: 272 TYFVTKFVGGLKTEIKAAIKLHKPRTVDAALSLAKTQEDLALEIKKGGQKS 322
>gi|32489310|emb|CAE03706.1| OSJNBa0060B20.14 [Oryza sativa Japonica Group]
Length = 3200
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 202 VLIDTGSTHNYLHPRLAHFLHLAIEKTMS--FLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
+L+D+GSTH+++ +L L L K+M+ V V +G + + + + QG+ F
Sbjct: 1849 MLVDSGSTHSFVDHQLG--LKLTGVKSMASPARVKVADGGHLNCSLYVNNCDWLTQGIHF 1906
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+++F +L D +LG+ WLE+ + D +EF ++G
Sbjct: 1907 KSNFRLLSLGTYDVILGMDWLEQFSPMKVDWVQKWLEFQFQG 1948
>gi|18652523|gb|AAL77156.1|AC091732_7 Putative polyprotein [Oryza sativa Japonica Group]
gi|21672107|gb|AAM74469.1|AC124213_27 Putative retroelement [Oryza sativa Japonica Group]
gi|31431768|gb|AAP53494.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 999
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAIL 71
++E A L + S+FG Y H L ++Q SV+ Y + FE + ++V ++ A
Sbjct: 125 SVESWAELCVVVHSKFGKDKYQEHLEELENMSQEGSVDEYYTKFEELMHKVL-IYNRAFD 183
Query: 72 DC-----FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQK 114
D F+ GLK I+ + +HKP ++ A++LAK E+ L N+K
Sbjct: 184 DTYFVTKFMGGLKTEIKAAIKLHKPRSVDAALSLAKTQEELLGELNKK 231
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 247 CSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
C +V+ QG F DF IL D +LG++W E I+ D + T+ FTY+
Sbjct: 360 CKEVQ-TTQGQTFVTDFKILALGGYDMILGMEWPEAFSPILVDWQKKTLNFTYQ 412
>gi|116309424|emb|CAH66499.1| H0321H01.8 [Oryza sativa Indica Group]
Length = 1602
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L I + L +L+D+GSTH+++ ++ L + V + +G ++ S
Sbjct: 423 KLRGWIQDMELLMLVDSGSTHSFIDSEVSLRLPGVHKLQTPLTVRIADGGTMKCTHEISS 482
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ MQG F F +L D +LG+ WLE + D MEF Y+G
Sbjct: 483 CNWWMQGNQFCNSFRVLPLGNYDIILGMDWLELFSPMQVDWANKWMEFLYQG 534
>gi|147822176|emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
Length = 480
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%)
Query: 205 DTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFH 264
D ST N+L + I+ T AV +G RI S+ + + MQG F+ D
Sbjct: 243 DLRSTXNFLDLVVXKRTRCLIQITNPMKAAVVDGTRITSDATYRQSTWNMQGKEFQVDLR 302
Query: 265 ILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++ D VLG+QWL +LG I+ D K L +F G
Sbjct: 303 LIPLGGYDMVLGIQWLAELGPILWDFKNLRXKFIVDG 339
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLK 79
A +FG S Y + + KL Q S V AYQ FE + T L + + CFISGLK
Sbjct: 103 ATADKFGXSIYDSPIGQIPKLKQVSMVRAYQDQFEALMVTTTRLLKEFFVQCFISGLK 160
>gi|255537958|ref|XP_002510044.1| conserved hypothetical protein [Ricinus communis]
gi|223550745|gb|EEF52231.1| conserved hypothetical protein [Ricinus communis]
Length = 181
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 22/134 (16%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
A++ RFG Y + A L L QT +++ Y F+++ ++VT L D L+ F+SGLK
Sbjct: 15 ALKGRFGEKIYEDPMADLKGLMQTGTLQEYLEAFDSLSHKVT-LPEDYSLNFFLSGLKDE 73
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLL 141
I+ + + P +L+ A ALA++ E L T T +P T N I
Sbjct: 74 IRIPVRMLGPKSLQQAYALARMQESYL------------TATKLPKTYANRPQIT----- 116
Query: 142 PLPPPNPSNPPKIA 155
PNPS+ K+A
Sbjct: 117 ----PNPSSISKLA 126
>gi|125534179|gb|EAY80727.1| hypothetical protein OsI_35909 [Oryza sativa Indica Group]
Length = 150
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQ 83
++FGP + N L +L+QTSSV AYQ+ F + +R T L + F +GL+ +
Sbjct: 26 AQFGPPIHRNSLGELKRLSQTSSVAAYQTKFLALASRTTEPLMDSQQIQLFTAGLREELA 85
Query: 84 NELAIHKPSNLRDAIALAKLIEDK 107
++ +H+P +L++A+ LA+ E K
Sbjct: 86 IDVELHQPDDLQEAMGLARAYERK 109
>gi|108862596|gb|ABA97714.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1287
Score = 54.3 bits (129), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 44/102 (43%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
L +D+GSTHN++ A + + V NGER+ G + G F
Sbjct: 314 LVAFLDSGSTHNFISEAAARRSGMPLHTRPRLTAMVANGERVTCAGVLKAAPLTIDGALF 373
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
AD ++ D VLG WL LG I+ D + M F +G
Sbjct: 374 PADLFVMPLVGFDVVLGTCWLGTLGPIVWDLASHRMSFQRQG 415
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
R+GP L +T +V YQ F+ + R L + F GL P + +
Sbjct: 118 RYGPPLRSTPLFELADCRRTGTVTEYQDRFQALLPRTGPLEEAQRVQLFTGGLLPPLSHA 177
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQS 110
+ +H P +L A++LA+ +E QS
Sbjct: 178 VRVHNPQSLAAAMSLARQLELIKQS 202
>gi|108862189|gb|ABA96448.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
gi|215767578|dbj|BAG99806.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 649
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
L +L+D+GSTH+++ + L + +V + +G + + K+ MQG F
Sbjct: 3 LLMLVDSGSTHSFIDKEVGLKLSGIQKLKQPLIVRIADGGTMSCTHEITNCKWWMQGYQF 62
Query: 260 EADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+F +L D +LG+ WLE + + D MEF ++G
Sbjct: 63 CNNFRMLPLGNYDIILGMDWLESISPMQVDWANKWMEFNHQG 104
>gi|296090255|emb|CBI40074.3| unnamed protein product [Vitis vinifera]
Length = 206
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 50 AYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
AYQ FE + +++ L + + CFISGL I+N++ + + + L + LA L E ++
Sbjct: 2 AYQEQFETLMAKISGLLEEFFVQCFISGLNEAIKNQVTMFRSNTLAQTMGLALLQEGTME 61
Query: 110 SYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTR 169
+ ++ K +N +T N IR+N LPP + KI + R
Sbjct: 62 AILKEV---KASNESEESTV-NSMGIRMNQNTQLPPIKRISATKIQDRWDKSLCYYCDER 117
Query: 170 QEPSEILQEEEILVEDTVPKQLSAKINNKPLS 201
EPS + ++I + D ++ A + K +S
Sbjct: 118 YEPSHKYKRKQIFLLDGHESKVEAIVKLKIIS 149
>gi|91805527|gb|ABE65492.1| hypothetical protein At3g29750 [Arabidopsis thaliana]
Length = 259
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I + + V ID+G+T N++ LA L L T V +G + I+S G C ++ +
Sbjct: 56 ILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWV 115
Query: 255 QGVGFEADFHILDFSR--ADAVLGVQWLEKLGKIITDHKALTMEFTY 299
Q V +F +LD ++ D +LG +WL KLG+ + + + F++
Sbjct: 116 QEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSH 162
>gi|116830535|gb|ABK28225.1| unknown [Arabidopsis thaliana]
Length = 260
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I + + V ID+G+T N++ LA L L T V +G + I+S G C ++ +
Sbjct: 56 ILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWV 115
Query: 255 QGVGFEADFHILDFSR--ADAVLGVQWLEKLGKIITDHKALTMEFTY 299
Q V +F +LD ++ D +LG +WL KLG+ + + + F++
Sbjct: 116 QEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSFSH 162
>gi|108706173|gb|ABF93968.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2453
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 68/290 (23%)
Query: 42 LTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDA 97
+ QT SV Y F+++ +++ + L P + F+ GLK I + + +P +L A
Sbjct: 2159 IRQTGSVTEYVDKFDSLMHQLIAYDSELKPVYFVTKFVEGLKDAIHTVIMVQRPQDLDTA 2218
Query: 98 IALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALP 157
+LA L E+ + + S TP+ + RN + L PL P N A
Sbjct: 2219 CSLALLQEEAMLGTRRLEFS-----TPVKSNFRNTAQVSLTPLPVRPVVNEDKKTPEAAK 2273
Query: 158 IC----RLTA---------------------------VEMQTRQEPSEILQEEEILVEDT 186
I RL++ V++ +E E LQE++ V D
Sbjct: 2274 ITPRDDRLSSLKAYRKSKGLCFTCGERWGRDHKCASTVQLHVMEELLEALQEDDDPVGDD 2333
Query: 187 VPKQ-----------------------LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHL 223
+ + + + L +L+D+GSTH+++ ++A L
Sbjct: 2334 IVAEAEGTLMAVSSQAIAGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVAR--KL 2391
Query: 224 AIEKTMS--FLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRA 271
A +T+S + + +G ++ + + +QG F +F +L SRA
Sbjct: 2392 AGIQTLSHPVQIKIADGGTMQCDRSIPNCNWWIQGCSFRTEFRVL-LSRA 2440
>gi|253761750|ref|XP_002489250.1| hypothetical protein SORBIDRAFT_0012s014620 [Sorghum bicolor]
gi|241947110|gb|EES20255.1| hypothetical protein SORBIDRAFT_0012s014620 [Sorghum bicolor]
Length = 1445
Score = 53.9 bits (128), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L+DTGSTHN+L + L L + V V NG+++R G V ++G F
Sbjct: 824 LLDTGSTHNFLSGAIMERLGLVPDGGDQLRVTVANGDKLRCAGIARNVPISIEGETFAIT 883
Query: 263 FHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+D D +LG +L LG I D +A TM F
Sbjct: 884 CADIDLGCFDFILGYDFLRTLGPITWDLEAKTMAF 918
>gi|15451606|gb|AAK98730.1|AC090485_9 Putative mutator-like transposase [Oryza sativa Japonica Group]
Length = 2421
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 68/290 (23%)
Query: 42 LTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDA 97
+ QT SV Y F+++ +++ + L P + F+ GLK I + + +P +L A
Sbjct: 2127 IRQTGSVTEYVDKFDSLMHQLIAYDSELKPVYFVTKFVEGLKDAIHTVIMVQRPQDLDTA 2186
Query: 98 IALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALP 157
+LA L E+ + + S TP+ + RN + L PL P N A
Sbjct: 2187 CSLALLQEEAMLGTRRLEFS-----TPVKSNFRNTAQVSLTPLPVRPVVNEDKKTPEAAK 2241
Query: 158 IC----RLTA---------------------------VEMQTRQEPSEILQEEEILVEDT 186
I RL++ V++ +E E LQE++ V D
Sbjct: 2242 ITPRDDRLSSLKAYRKSKGLCFTCGERWGRDHKCASTVQLHVMEELLEALQEDDDPVGDD 2301
Query: 187 VPKQ-----------------------LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHL 223
+ + + + L +L+D+GSTH+++ ++A L
Sbjct: 2302 IVAEAEGTLMAVSSQAIAGVESSKSIRVRGWVQGLELLMLVDSGSTHSFIDEQVAR--KL 2359
Query: 224 AIEKTMS--FLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRA 271
A +T+S + + +G ++ + + +QG F +F +L SRA
Sbjct: 2360 AGIQTLSHPVQIKIADGGTMQCDRSIPNCNWWIQGCSFRTEFRVL-LSRA 2408
>gi|77551679|gb|ABA94476.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 125/327 (38%), Gaps = 59/327 (18%)
Query: 22 AIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP----DAILDCFISG 77
A+ ++FG + KL QT SV +Y F ++ +++ HP + + F+ G
Sbjct: 200 AVCAKFGREEFQGVVRQFNKLRQTGSVTSYAKRFNDLMHQLHVHHPSWNPEFFVTQFLEG 259
Query: 78 LKPTI---------------------QNELA---------IHKPSNLR-----------D 96
LKP I Q+E+A + P+N R D
Sbjct: 260 LKPEIRAAVLLHRPSDMDTAVDLSCLQDEVAKIVRREPRRVEFPANNRVSGEDRNLPMED 319
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIAL 156
+A + Y+ W + PT + L+ L + + A
Sbjct: 320 RVAALRAYRKAKGLYHTCGERWSHEHKCGPTVQLHVVEELLDLL------ENFDENQTAT 373
Query: 157 PICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPR 216
+ + E + E +I +E + E + +L + + + +L+D+GSTH+++
Sbjct: 374 VSDEIESEETEVNGEVCQISKEAMLETETSGTLRLQGLMQHHQIMLLVDSGSTHSFVSAA 433
Query: 217 LAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK----VKFEMQGVGFEADFHILDFSRAD 272
L L + V + +G + HC+K + +QG F +L D
Sbjct: 434 LDDKLGGKQRAVPAIKVRIADGGIL----HCNKEIVDCLWLVQGESFLTSLKVLPLGNYD 489
Query: 273 AVLGVQWLEKLGKIITDHKALTMEFTY 299
+LG+ WLE+ + D +A T++F Y
Sbjct: 490 VILGMDWLEQHSPMKVDWRAKTLQFHY 516
>gi|62733129|gb|AAX95246.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550683|gb|ABA93480.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1311
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL+D+G++H+++ A L+ G +R++ C +VK E+
Sbjct: 273 VNSVPATVLLDSGASHSFVSRSCASQHQFPTIPLKCSLLIQTPGSEMRTQTGCPRVKIEI 332
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII-TDHKALTME 296
+GV F A+ +LD + D +LG+ WL ++ +++T+E
Sbjct: 333 EGVEFFANLIMLDTPQLDVILGMDWLHSSKAVLDCGSRSITLE 375
>gi|147775006|emb|CAN70472.1| hypothetical protein VITISV_013479 [Vitis vinifera]
Length = 143
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 39/63 (61%)
Query: 46 SSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIE 105
S+ YQ F + NRV A++ F+ GLK I +++ + KP +L++AI+LA++ +
Sbjct: 78 GSLRDYQREFXKLGNRVQGWTQKALVGTFMGGLKSEIADDIRMFKPKSLKEAISLARMRD 137
Query: 106 DKL 108
D+L
Sbjct: 138 DQL 140
>gi|147767540|emb|CAN66709.1| hypothetical protein VITISV_006396 [Vitis vinifera]
Length = 1133
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 198 KPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257
+P+ VLID+GSTHN++ +A + +++ V V +GE++ S G CS V+ ++Q V
Sbjct: 1057 QPMEVLIDSGSTHNFISVLVAECVGFNLKQDRKMEVMVASGEKLVSLGSCSNVQLKLQKV 1116
Query: 258 GFEADFHILDFSRADAV 274
F +L D V
Sbjct: 1117 TIVVKFLVLPLEDFDVV 1133
>gi|449466919|ref|XP_004151173.1| PREDICTED: uncharacterized protein LOC101214111 [Cucumis sativus]
Length = 503
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 231 FLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDH 290
F+V +G+ R + G C +V+ +Q + ADF ++ D VLG+QWL+ +G +
Sbjct: 275 FVVTIGDDTRCKGRGVCKRVELRLQELTIIADFLAVELGNVDLVLGMQWLDTIGTMKVHW 334
Query: 291 KALTMEFTYK 300
+LTM F K
Sbjct: 335 PSLTMTFLAK 344
>gi|357117177|ref|XP_003560350.1| PREDICTED: uncharacterized protein LOC100835480 [Brachypodium
distachyon]
Length = 899
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT--NLHPDA--ILDCFISGL 78
+ + G Y + + + Q +V+ Y FE + +RV N H D ++ F+ GL
Sbjct: 202 VNGKIGKDKYHMYLDKMEPIVQAGTVDEYYHAFEELTHRVLMHNKHYDEAFFVNKFLKGL 261
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS-WKPTNTPIPTTTRNETNIRL 137
KP IQ+ + +HKPS + A++LA+ ED L+ Q + S +K P+ + ++ ++
Sbjct: 262 KPDIQSAIRLHKPSTIDAALSLAQTQEDLLEEARQLTSSRYKHDYKPVYKSFSHQKSL-- 319
Query: 138 NPLLPLPPPN 147
+ P P P
Sbjct: 320 --MGPGPAPK 327
>gi|449504808|ref|XP_004162300.1| PREDICTED: uncharacterized protein LOC101229007 [Cucumis sativus]
Length = 746
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 105/276 (38%), Gaps = 75/276 (27%)
Query: 64 NLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK--------LQSYNQKS 115
+L + + F+SGLKP IQ E+ +P L + +A+ +E++ L Y+
Sbjct: 132 DLPEKVVEETFMSGLKPWIQAEMDFCEPKGLSQMMRIAQKVENREDIRREANLPGYSGGK 191
Query: 116 ISWKPTNTPIPTTTR---NETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEP 172
++ +T + TT N+ ++ + + + P+ RL+ E Q+R+E
Sbjct: 192 LNSSENSTKVNTTVNAGNNKGSMNWSMRTITLRETSNEEARKERPMKRLSDAEFQSRREK 251
Query: 173 SEILQ-----------------------------EEEILVEDTVPKQ------------- 190
+ E EI+ ED ++
Sbjct: 252 GLCFRCNEKYSHDHKCKAKEYRELRMLVVMGENVEYEIIEEDNTEQEELNTIEVTGDEQT 311
Query: 191 -------------------LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSF 231
+ KI + + VLID G+THN++ L L + + T ++
Sbjct: 312 VVELSINSVVGLSNPGTMKVKGKIQGREVIVLIDCGATHNFISEGLVEELQINTKITSNY 371
Query: 232 LVAVGNGERIRSEGHCSKVKFEMQGVG---FEADFH 264
V +G+G I+ +G C ++ G F++DF+
Sbjct: 372 GVILGSGTAIKGKGICEAIEIWCNRSGLEEFDSDFY 407
>gi|110288688|gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1068
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q + +V T P +N+ P +V
Sbjct: 568 VPVPNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATV 611
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G ++ S +C V E++GV F +
Sbjct: 612 LFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEGVPFPSS 671
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 672 LILLESKDLDVILGMDWLSRHRGVI 696
>gi|19881768|gb|AAM01169.1|AC113336_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1449
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 310 VPVPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 353
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G ++ S +C V E++GV F +
Sbjct: 354 LFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEGVPFPSS 413
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 414 LILLESKDLDVILGMDWLSRHRGVI 438
>gi|147843772|emb|CAN79864.1| hypothetical protein VITISV_038293 [Vitis vinifera]
Length = 1110
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 38 TLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDA 97
L ++ Q S++ YQ FE + NR A++ F+ GLK I + + + KP +L++A
Sbjct: 138 ALSRVKQMGSLQDYQREFEKLGNRGQGWTQKALVGTFMGGLKSEIADGIRMFKPKSLKEA 197
Query: 98 IALAKLIEDKL 108
I+LA++ +D+L
Sbjct: 198 ISLARMRDDQL 208
>gi|77554563|gb|ABA97359.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 795
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 150 NPPKIALPIC------RLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
N P+ + +C RL V+ + +E Q ++ T P +N+ P +L
Sbjct: 76 NEPRHMVRMCPKPRRARLKFVQARVNHASAEEAQSAPEVILGTFP------VNSTPAVIL 129
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ R A L++ K + G + + +C + E+QG+ F A+
Sbjct: 130 FDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSMTVEIQGLIFPANL 189
Query: 264 HILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+L+ D +LG+ WL + +I D + T++ T
Sbjct: 190 ILLESKDLDVILGMDWLTRYRGVI-DCASRTIKLT 223
>gi|297604112|ref|NP_001055003.2| Os05g0241900 [Oryza sativa Japonica Group]
gi|255676164|dbj|BAF16917.2| Os05g0241900 [Oryza sativa Japonica Group]
Length = 578
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 109/294 (37%), Gaps = 43/294 (14%)
Query: 46 SSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIALA 101
++VE Y FE+ + V HP + CFI GL+ I+ ++ KP L + A
Sbjct: 188 TTVEQYIDKFEDYVDLVKRDHPYLQEQYLTSCFIGGLRADIKYDVCGQKPQGLLETYWAA 247
Query: 102 ---KLIEDKLQSYNQKSISW-KPTNTPIPTTTRNETNIRLNP--LLPLPPPNPSNPPKIA 155
K++ + ++ NQ + + N R E + R P P + KI
Sbjct: 248 NARKMVGNFNRNRNQNPLGGNQGRNANHRGQNRGEGDRREEKKCWFCKEPWFPRHQCKIK 307
Query: 156 LPICRLTAVEMQTRQEPSEILQ-----------------------EEEILVEDTV----- 187
I L +E QE E EE + + T
Sbjct: 308 QAIHAL--LEEDDGQEDKETSNTGGDEEEKKETEESATSENESPTEELMYISQTAVQGTS 365
Query: 188 -PKQLSA--KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
P S KIN + L+D+GST ++ A + ++ T + V V G ++++
Sbjct: 366 RPDTFSVLIKINGRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTD 425
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ +E+QG F F +L D +LG W+ I D K + T
Sbjct: 426 VMVPDISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGIT 479
>gi|222636869|gb|EEE67001.1| hypothetical protein OsJ_23913 [Oryza sativa Japonica Group]
Length = 877
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIIT 288
+ F++A NG+R+ S G C + + G F D LD D +LG+QWL+ LG I+
Sbjct: 665 LRFVMA--NGDRLVSPGLCRNLALNIDGEAFSVDCFALDLCAVDIILGMQWLQTLGPILW 722
Query: 289 DHKALTM 295
D K + M
Sbjct: 723 DFKNMRM 729
>gi|356537579|ref|XP_003537304.1| PREDICTED: uncharacterized protein LOC100816964 [Glycine max]
Length = 751
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEG 245
+ S+ IN + +L+D+GS+ N+L PR+A+ L L IE +F V VGNG + +EG
Sbjct: 382 KFSSTINGMVVQILLDSGSSDNFLQPRIANCLKLPIEPASNFQVLVGNGNSLVAEG 437
>gi|116311090|emb|CAH68019.1| H0807C06-H0308C08.6 [Oryza sativa Indica Group]
Length = 1260
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 205 PAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 248
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A L + + L+ G ++ S +C E++ V F +
Sbjct: 249 FDSGATHSFLSKSFASNLGMEVVSLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 308
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
++L+ D +LG+ WL + +I
Sbjct: 309 NLLESKDLDVILGMDWLSRHRGVI 332
>gi|34015354|gb|AAQ56543.1| putative gag-protein [Oryza sativa Japonica Group]
Length = 835
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H++++ L +E+ + L+ G + ++ + V E+
Sbjct: 651 IHSIPATILFDSGASHSFIYVPFVGRNQLGVERIRNPLLITTPGGVMTAKYYSPTVPIEI 710
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 711 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 743
>gi|116309457|emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]
Length = 1450
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 116/285 (40%), Gaps = 42/285 (14%)
Query: 29 PSSYINHRATLFKLTQ--TSSVEAYQSTFENICNRVTNLHPDAIL------DCFISGLKP 80
P + + F+ Q T +V Y F NR+ P+ + + F+SGL
Sbjct: 178 PEGIVAQKKREFRSLQQGTRTVIEYLHEF----NRLARYAPEDVCTDAERQEKFMSGLDD 233
Query: 81 TIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQ-KSISWKPTNTPIPTTTRNETNIRLNP 139
+ N+L RD KL++ ++ Q ++ +P P + + N
Sbjct: 234 ELTNQLIS------RDYEDFEKLVDKAIRQEEQCNKMNPQPAQPEQPKKFGEKPELCFNC 287
Query: 140 LLP------LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSA 193
P P P + P + + +A E Q+ E ++ T P
Sbjct: 288 NEPGHTVGKCPKPRRAGPKFVQACVNHASAEEAQSAPE----------VILGTFP----- 332
Query: 194 KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFE 253
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E
Sbjct: 333 -VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVE 391
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 392 IQGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 435
>gi|77554705|gb|ABA97501.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 595
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 372 VNSVPATVLFDSGATHSFLSMSFARNHGMEVEDLRRPLMVSTPSNQALSSQRSPSVRIEI 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 432 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 464
>gi|224142047|ref|XP_002324370.1| predicted protein [Populus trichocarpa]
gi|222865804|gb|EEF02935.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAI 98
L + QTS+VE Y++ FE + NRV L L+CF+ GLK ++ + + P N+ A
Sbjct: 4 LISIKQTSTVELYKTQFEMLLNRVRGLSDSHRLNCFLGGLKEEMRVGVGMLNPQNIVAAY 63
Query: 99 ALAKLIEDKLQ 109
LAK+ E+ L+
Sbjct: 64 WLAKMQEENLK 74
>gi|13129427|gb|AAK13085.1|AC078839_1 Similar to Sorghum bicolor 22 kDakafirinclusterpolyprotein [Oryza
sativa Japonica Group]
Length = 1484
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 380 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 439
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T+E T
Sbjct: 440 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIELT 482
>gi|77556354|gb|ABA99150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1082
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 116/294 (39%), Gaps = 45/294 (15%)
Query: 17 AALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAIL----- 71
RA R GP R + T +V Y F NR+ P+ +
Sbjct: 15 GGFGRADGGRDGPRD--GERGGV---NGTRTVIEYLHEF----NRLARYAPEDVRTDAER 65
Query: 72 -DCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTR 130
+ F+SGL + N+L RD KL+ DK ++++ P P
Sbjct: 66 QEKFLSGLDDELTNQLIS------RDYEDFQKLV-DKAIRQEEQALPALPAQPKQPKRLG 118
Query: 131 NETNIRLNPLLP------LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVE 184
+ + N P P P + P + + +A E Q+ E ++
Sbjct: 119 EKPGLCFNCNKPGHTVGKCPKPRRAGPKFVQAHVNHASAEEAQSAPE----------VIL 168
Query: 185 DTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
T P +N+ P +L D+G+TH+++ R A L++ K + G + +
Sbjct: 169 GTFP------VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTT 222
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+C V E+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 223 HYCPSVTIEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCTSRTIKLT 275
>gi|53981172|gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 109/294 (37%), Gaps = 43/294 (14%)
Query: 46 SSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIALA 101
++VE Y FE+ + V HP + CFI GL+ I+ ++ KP L + A
Sbjct: 188 TTVEQYIDKFEDYVDLVKRDHPYLQEQYLTSCFIGGLRADIKYDVCGQKPQGLLETYWAA 247
Query: 102 ---KLIEDKLQSYNQKSISW-KPTNTPIPTTTRNETNIRLNP--LLPLPPPNPSNPPKIA 155
K++ + ++ NQ + + N R E + R P P + KI
Sbjct: 248 NARKMVGNFNRNRNQNPLGGNQGRNANHRGQNRGEGDRREEKKCWFCKEPWFPRHQCKIK 307
Query: 156 LPICRLTAVEMQTRQEPSEILQ-----------------------EEEILVEDTV----- 187
I L +E QE E EE + + T
Sbjct: 308 QAIHAL--LEEDDGQEDKETSNTGGDEEEKKETEESATSENESPTEELMYISQTAVQGTS 365
Query: 188 -PKQLSA--KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
P S KIN + L+D+GST ++ A + ++ T + V V G ++++
Sbjct: 366 RPDTFSVLIKINGRTAVGLVDSGSTTTFMDQDYALRNYYPLKNTDTKKVVVAGGGELKTD 425
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ +E+QG F F +L D +LG W+ I D K + T
Sbjct: 426 VMVPDISYEIQGECFTNQFKLLPLKGYDIILGADWIYNYSPISLDLKQRILGIT 479
>gi|58532059|emb|CAD40391.3| OSJNBa0004L19.10 [Oryza sativa Japonica Group]
Length = 515
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 216 IHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 275
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 276 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 308
>gi|78708482|gb|ABB47457.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1461
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 380 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 439
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T+E T
Sbjct: 440 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIELT 482
>gi|147767794|emb|CAN71655.1| hypothetical protein VITISV_016552 [Vitis vinifera]
Length = 496
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPP 145
+ + KP L++A +LA++ +++LQ Q IS +P P+PT T LL LP
Sbjct: 211 IRMFKPKTLKEATSLARMKDEQLQ--RQIRIS-RP---PLPTRT----------LLALPT 254
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
P ++P K RLT EMQ R+ + + A+I + + V ID
Sbjct: 255 PTKASPVK------RLTWDEMQQRRAQRLCFNCNDKFT-------IKAQIGHHEIEVFID 301
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSF 231
STHN+L+ ++ L L++ T F
Sbjct: 302 RRSTHNFLNAKMVEILQLSVISTDRF 327
>gi|449502909|ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
Length = 446
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ I +K + VL+D G+THN++ RL L L + T ++ V +G+G I+ + C K
Sbjct: 366 KIRGTIQSKEVVVLVDCGATHNFISDRLVMTLKLPSKDTSNYGVILGSGTTIKGKRVCEK 425
Query: 250 VKFEMQGVGFEADFHILDF 268
V+ ++ G +F LD+
Sbjct: 426 VELDLNGWTVMENFLPLDW 444
>gi|147804695|emb|CAN64702.1| hypothetical protein VITISV_029781 [Vitis vinifera]
Length = 713
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 35/157 (22%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RFG S Y + + KL Q S+V AYQ FE + +++ L + + CFISGL I+N+
Sbjct: 86 RFGRSVYDSPIGQITKLKQVSTVMAYQEQFETLMAKISGLLEEFFVQCFISGLNEAIKNQ 145
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPP 145
+ A L E K + +++S T N IR+N LP
Sbjct: 146 ----------EGTMEAILKEVKASNXSEES-------------TVNSMGIRMNQNTQLP- 181
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEIL 182
PI R++A ++Q R + S +E L
Sbjct: 182 -----------PIKRISATKIQDRWDKSLCYYCDESL 207
>gi|116308903|emb|CAH66035.1| H0515C11.11 [Oryza sativa Indica Group]
Length = 499
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 109/283 (38%), Gaps = 26/283 (9%)
Query: 27 FGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAI-LDCFISGLKPTIQNE 85
FGP + N + +L QTSSV YQ+ F + +R D + F +GL+ + +
Sbjct: 187 FGPPIHRNPLGEMKRLMQTSSVAVYQTKFLALASRTFEALSDKQQIQLFTAGLRDELAVD 246
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRN--ETNIRLNPLLPL 143
+ +H+P +L++A++LA+ E K S P P RN T+ N LP
Sbjct: 247 VELHQPDDLQEAMSLARAYERKASKLGNASR--PPPRQPF----RNVASTSALANSALPG 300
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVED-TVPKQLSAKINNKPLSV 202
P+ RL+ E+ R+ +E V D + + +
Sbjct: 301 TDAMVDATPR---QFRRLSPAELAERRRQGLCYNCDEKFVRDHKCARLFHIEYDETASDD 357
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQ------- 255
+ PR++ ++ + + RI + + + + Q
Sbjct: 358 DAAPAGDADTDEPRVSLNALSGVDGANTMRLPCA---RISASWWPTAIVWRAQAFAAICL 414
Query: 256 ---GVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
G F D +L+ D +LG +WL LG I+ + + + M
Sbjct: 415 TIDGERFHVDCFVLEVYAIDIILGTEWLRSLGPILWNFRNMRM 457
>gi|54287629|gb|AAV31373.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2408
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q + +V T P +N+ P SVL
Sbjct: 343 PAPNNSNAPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPASVL 386
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 387 FDSGATHSFLSKSFASNYGMEVISLGRHLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 446
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 447 ILLESKDLDVILGMDWLSRHRGVI 470
>gi|32489198|emb|CAE04383.1| OSJNBa0027G07.25 [Oryza sativa Japonica Group]
gi|38347092|emb|CAE02564.2| OSJNBa0006M15.7 [Oryza sativa Japonica Group]
Length = 1807
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ GE + ++ + V E+
Sbjct: 723 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGEVMTAKYYSPAVPIEI 782
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 783 QGIPFPSDLILLDTRNLDVILGMNWLAQFQGVV 815
>gi|18378609|gb|AAL68642.1|AF458766_1 polyprotein [Oryza sativa Japonica Group]
Length = 677
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I L +LID+GS+H++L + + V V +GE + + + +
Sbjct: 39 IQGTKLLMLIDSGSSHSFLDENIVQTMQGVTSLPQPVKVKVASGEVLICDKQLPDYAWWL 98
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLG--KIITDHKALTME 296
QG + +F +L DA+LG+ WL+ LG +II K L E
Sbjct: 99 QGRCYRTNFKLLSLPGYDAILGIDWLQGLGVMRIIWVQKWLEYE 142
>gi|21672017|gb|AAM74379.1|AC116603_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 987
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLA--HFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
+N+ P ++L D+G+TH+++ R A H L+L K + G G + + +C V
Sbjct: 273 VNSIPATILFDSGATHSFISKRFAGAHRLYLVKLKIPMRVHTPGGG--MTTTHYCPSVTV 330
Query: 253 EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
E+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 331 EIQGLIFPANLILLESKDLDIILGMDWLTRHRGVI-DCTSRTIKLT 375
>gi|449479939|ref|XP_004155753.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 426
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%)
Query: 221 LHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
L+L +E+ F V +G+G + +G C +V+ ++ + ADF + R D VLG+QWL
Sbjct: 111 LNLLVEEKTKFGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLGRIDVVLGMQWL 170
Query: 281 EKLGKIITDHKALTMEF 297
G + +TM F
Sbjct: 171 CTTGFMGVHWPTMTMTF 187
>gi|77555464|gb|ABA98260.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1360
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 438 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVNTPGGGMTTTHYCPSVTVEI 497
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T+
Sbjct: 498 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLTH 541
>gi|38567914|emb|CAD41578.3| OSJNBa0088I22.10 [Oryza sativa Japonica Group]
Length = 1157
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 106/273 (38%), Gaps = 42/273 (15%)
Query: 41 KLTQTSSVEAYQSTFENICNRVT----NLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
K+ QT SV Y F+ I +++ +L P + F+ GL+ I++ + + + +L
Sbjct: 212 KICQTGSVADYVEQFDCIMHQMMAYDPSLKPVYFVTKFVEGLRHAIRSAILLQRLGDLNV 271
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKI-- 154
A LA L E+ L+ KP + + ++ PL PLPP PP I
Sbjct: 272 ACTLALLQEEALEGD-------KPKESKKSDGYQKQSVKGAMPL-PLPPTTKGGPPIISN 323
Query: 155 ----------ALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLI 204
+ RL+A++ R + + E+ + + + + L VL
Sbjct: 324 DRRGTELSNHSREYDRLSALKSYRRSKGLCFVYGEKWGRDHKCASSIQLHVVQELLDVLQ 383
Query: 205 DTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFH 264
+ P LA V V +G + H + QG+ F+++F
Sbjct: 384 GVKAM-----PVLAR-------------VKVADGGFLTCSLHIIDCDWLTQGIHFKSNFR 425
Query: 265 ILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+L D +L + WLE+ + D +EF
Sbjct: 426 LLALGAYDVILEMDWLERFSPMRVDWVHKWLEF 458
>gi|50300513|gb|AAT73656.1| unknown protein, similar to polyprotein [Oryza sativa Japonica
Group]
Length = 917
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H++++ L +E+ + L+ G + ++ + V E+
Sbjct: 631 IHSIPATILFDSGASHSFIYVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPVVPIEI 690
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 691 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 723
>gi|77556355|gb|ABA99151.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 836
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 97/231 (41%), Gaps = 30/231 (12%)
Query: 74 FISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNET 133
F+SGL + N+L RD KL+ DK ++++ P P +
Sbjct: 175 FLSGLDDELTNQLIS------RDYEDFQKLV-DKAIRQEEQALPALPAQPKQPKRLGEKP 227
Query: 134 NIRLNPLLP------LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTV 187
+ N P P P + P + + +A E Q+ E ++ T
Sbjct: 228 GLCFNCNKPGHTVGKCPKPRRAGPKFVQAHVNHASAEEAQSAPE----------VILGTF 277
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
P +N+ P +L D+G+TH+++ R A L++ K + G + + +C
Sbjct: 278 P------VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYC 331
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
V E+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 332 PSVTIEIQGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCTSRTIKLT 381
>gi|108862573|gb|ABA97909.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1613
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H++++ L +E+ + L+ G + ++ + V E+
Sbjct: 531 IHSIPATILFDSGASHSFIYVPFVGRNRLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 590
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 591 QGIPFPSDLILLDTKNLDVILGINWLAQFQGVV 623
>gi|77554980|gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 457 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 516
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T+
Sbjct: 517 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLTH 560
>gi|62732706|gb|AAX94825.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550391|gb|ABA93188.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 574
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 372 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPLVTVEI 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 432 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCTSRTIKLT 474
>gi|38567989|emb|CAE04032.2| OSJNBb0068N06.8 [Oryza sativa Japonica Group]
Length = 947
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 253 IHSIPATILFDSGASHSFISVPFMGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 312
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 313 QGIAFPSDLILLDTKNLDVILGMNWLAQFQGVV 345
>gi|357498095|ref|XP_003619336.1| hypothetical protein MTR_6g046770 [Medicago truncatula]
gi|355494351|gb|AES75554.1| hypothetical protein MTR_6g046770 [Medicago truncatula]
Length = 246
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCSKV 250
+ INN PL +IDTG+TH ++ L L + + +V + + C +
Sbjct: 121 TCYINNTPLVAIIDTGATHCFIAFDCVSTLGLDLSDMNGEMVVETPAKGSVTTSLVCLRC 180
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
F M G FE D L S D +LG+ WLE
Sbjct: 181 PFSMFGRDFEMDLVCLPLSGMDVILGMNWLE 211
>gi|108862521|gb|ABA97778.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1557
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 478 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 537
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T+
Sbjct: 538 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLTH 581
>gi|110289611|gb|AAP55099.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1565
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 448 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 507
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 508 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 550
>gi|50897341|gb|AAT85792.1| reverse transcriptase (RNA-dependent DNA polymerase) family protein
[Oryza sativa Japonica Group]
gi|108709088|gb|ABF96883.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1708
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I + P ++L D+G++H+++ + L +E+ + L+ G + ++ + V E+
Sbjct: 683 IYSIPATILFDSGASHSFISVPFVGRIQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 742
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 743 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 775
>gi|38345904|emb|CAE03548.2| OSJNBa0060D06.14 [Oryza sativa Japonica Group]
Length = 1458
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLARHRGVI-DCASRTIKLT 509
>gi|62733353|gb|AAX95470.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864030|gb|ABA91610.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1441
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 408 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 468 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 510
>gi|22725995|gb|AAN04995.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1413
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 379 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 438
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 439 QGLIFPANLILLESKDLDVILGMDWLARHRGVI-DCASRTIKLT 481
>gi|77553962|gb|ABA96758.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1786
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + S V E+
Sbjct: 683 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSSAVPIEI 742
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 743 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVM 775
>gi|62734395|gb|AAX96504.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550471|gb|ABA93268.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1506
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ PL+VL D+G+TH+++ A L L E + G + ++ C V+ +
Sbjct: 411 VHSIPLTVLFDSGATHSFMSTLKAKQLDLKTEFLSDAMRIQSPGSTMVTKLLCKGVELII 470
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKL-GKIITDHKALTMEFT 298
GV F+A+ +LD + +LG+ WL K G I H+ +T+ T
Sbjct: 471 DGVKFKANLILLDTLGLNVILGMDWLTKHEGTIDCAHRTVTLRST 515
>gi|62733821|gb|AAX95930.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550638|gb|ABA93435.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1169
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 473 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 532
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 533 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 575
>gi|110288739|gb|AAP52510.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 382 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 441
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 442 QGLIFPANLILLESKDLDVILGMDWLARHRGVI-DCASRTIKLT 484
>gi|62733354|gb|AAX95471.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|108864031|gb|ABG22378.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1441
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 408 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 468 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 510
>gi|116317795|emb|CAH65834.1| OSIGBa0124C14.1 [Oryza sativa Indica Group]
Length = 1481
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 342 VPTPNNSNAPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 385
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 386 LFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEEVPFPSS 445
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 446 LILLESKDLDVILGMDWLSRHRGVI 470
>gi|54291802|gb|AAV32171.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1310
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P P R+ V + + P +L T P +N+ P SVL
Sbjct: 284 PAPNNSNAPA---PKARVNHVAAEAQNAPDVVL--------GTFP------VNSIPASVL 326
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + L+ G ++ S +C E++ V F +
Sbjct: 327 FDSGATHSFLSKSFASNHGMEFISLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 386
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 387 ILLESKDLDVILGMDWLSRHRGVI 410
>gi|218199463|gb|EEC81890.1| hypothetical protein OsI_25707 [Oryza sativa Indica Group]
Length = 839
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIIT 288
+ F+VA NG+R+ S G C + + F D LD D +LG+QWL+ LG I+
Sbjct: 627 LRFVVA--NGDRLVSPGLCRNLTLNIDDEAFSVDCFALDLCAVDIILGMQWLQTLGPILW 684
Query: 289 DHKALTM 295
D K + M
Sbjct: 685 DFKNMRM 691
>gi|357438009|ref|XP_003589280.1| B3 domain-containing protein REM16 [Medicago truncatula]
gi|355478328|gb|AES59531.1| B3 domain-containing protein REM16 [Medicago truncatula]
Length = 423
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 14/103 (13%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L ++ P+ +L+D+G+THN++ +L ++ + N + RS G +
Sbjct: 293 KLRGRVEGVPVLLLVDSGATHNFISKKL--------------VIELANMYKTRSTGERKQ 338
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
V EM + E + D + D VLG WL +G++ ++++
Sbjct: 339 VMVEMGKLKLEIGALVFDLDKVDIVLGTTWLNSIGELKGENRS 381
>gi|50080333|gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLARHRGVI-DCASRTIKLT 509
>gi|77550774|gb|ABA93571.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1383
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S C VK E+
Sbjct: 371 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRCPSVKIEI 430
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 431 QKVPFLANLILLESKDLDVILGMDWLARYKGVI 463
>gi|38346992|emb|CAD40278.2| OSJNBb0062H02.17 [Oryza sativa Japonica Group]
gi|38347666|emb|CAE05600.2| OSJNBa0054D14.1 [Oryza sativa Japonica Group]
Length = 1629
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 55/112 (49%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ +I K + +L+D+GS+ +++ R+A L +E+ + V V G ++
Sbjct: 479 RMLGQIQGKEILILVDSGSSASFISKRVASSLMGVLEQPVHVQVMVAGGAKLHCCSEILN 538
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++ +QG F + +L+ + D +LG+ WL + + D ++ Y G
Sbjct: 539 CEWTIQGHVFFTNLKVLELNNYDMILGMDWLMQHSPMTVDWTTKSLIIAYAG 590
>gi|77555436|gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 405 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPAVTVEI 464
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 465 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 507
>gi|28273360|gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|62733520|gb|AAX95637.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|108710593|gb|ABF98388.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1229
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 112 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 171
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 172 QGLIFPANLILLESKDLDVILGMDWLARHRGVI-DCASRTIKLT 214
>gi|50080316|gb|AAT69650.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1458
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|77555411|gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1562
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 445 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 504
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 505 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 547
>gi|18652524|gb|AAL77157.1|AC091732_8 Putative polyprotein [Oryza sativa Japonica Group]
gi|31431769|gb|AAP53495.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1839
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 736 IHSIPATILFDSGASHSFISVPFVGRNQLRVERLRNPLLITTPGGVMTAKYYSPAVPIEI 795
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKL-GKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + G ++ + +T+ Y+G
Sbjct: 796 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVVCARRTVTL---YRG 840
>gi|38344617|emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group]
gi|38347085|emb|CAE05109.2| OSJNBa0001M07.5 [Oryza sativa Japonica Group]
Length = 1471
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 354 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 413
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 414 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 456
>gi|108708179|gb|ABF95974.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1643
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 594 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 637
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 638 LFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSS 697
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 698 LILLESKDLDVILGMDWLSRHRGVI 722
>gi|19225016|gb|AAL86492.1|AC077693_31 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|284434667|gb|ADB85376.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 839
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ A L + + L+ G + + C +VK +
Sbjct: 249 VNSAPATVLFDSGASHSFVSQISAAKHPLKVSTLKTALLVPSPGSELSTNQSCPQVKMII 308
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKAL 293
+GV F A+ I++ D +LG+ W TDH+A+
Sbjct: 309 EGVEFLANLVIINTKSLDVILGMDWF-------TDHQAI 340
>gi|110288888|gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 478 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 537
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 538 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 580
>gi|108708192|gb|ABF95987.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1273
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 683 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 742
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 743 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 775
>gi|15128451|dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
gi|20804440|dbj|BAB92137.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353682|gb|AAU44248.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|108864085|gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 167 QTRQEPSEILQEEEILVED------TVPKQLSA--KINNKPLSVLIDTGSTHNYLHPRLA 218
+T P EI QEE + V T P S +IN + L+D+GS ++ A
Sbjct: 307 ETEHAPEEIDQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYA 366
Query: 219 HFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQ 278
+ T S V V G ++SE + +++QG F F+++ D +LG
Sbjct: 367 IRNDCPLVSTDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGAD 426
Query: 279 WLEKLGKIITDHKALTMEFT 298
W+ K I D K + T
Sbjct: 427 WIYKYSPITLDLKKRELGIT 446
>gi|51038165|gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51038205|gb|AAT94008.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1500
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 383 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 442
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 443 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 485
>gi|55733831|gb|AAV59338.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1238
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 121 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 180
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 181 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 223
>gi|16905208|gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|19881536|gb|AAM00937.1|AC021892_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1052
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 700 VHSIPATILFDSGASHSFISVSFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 759
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 760 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 792
>gi|19881766|gb|AAM01167.1|AC113336_19 Putative retroelement [Oryza sativa Japonica Group]
gi|110288687|gb|ABB46920.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 892
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 708 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 767
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 768 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 800
>gi|108708202|gb|ABF95997.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1764
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 661 IHSIPATILFDSGASHSFISVPFVGKSQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 720
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 721 QGIPFSSDLILLDTKNLDVILGMNWLAQFQGVV 753
>gi|77555076|gb|ABA97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 923
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + IE L+ + S V+ E+
Sbjct: 189 VNSVPATVLFDSGATHSFLSMSFAGNHGMEIEDLRHPLMVSTLSNQALSSQRSPSVRIEI 248
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 249 QGVPFLANLILLESKHLDVILGMDWLARYKGVI 281
>gi|255585537|ref|XP_002533459.1| conserved hypothetical protein [Ricinus communis]
gi|223526692|gb|EEF28928.1| conserved hypothetical protein [Ricinus communis]
Length = 259
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGL 78
+ + SRF P + L ++ QT S++ Y+ FE + NRV + ++ F+ GL
Sbjct: 163 FKKELVSRFDPGIETDFGEALSRVKQTGSLKDYRKEFERLSNRVEDCPTKELIGTFMGGL 222
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
K I E+ + P+ L + +A+ E KL
Sbjct: 223 KEAIAEEVRMSNPNTLLKTVEMARTREVKL 252
>gi|54287623|gb|AAV31367.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1611
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H++++ L +E+ + L+ G + ++ + V E+
Sbjct: 631 IHSIPATILFDSGASHSFIYVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPVVPIEI 690
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 691 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 723
>gi|38347240|emb|CAE05433.2| OSJNBa0059H15.4 [Oryza sativa Japonica Group]
Length = 407
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 25/116 (21%)
Query: 184 EDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLA--IEKTMSFLVAVGNGERI 241
E ++ I + +LID+GS+H++L ++AH ++K +S
Sbjct: 80 ESATSFRIKGCIQGTEVLMLIDSGSSHSFLDTQVAHKFQGVQPLQKVLS----------- 128
Query: 242 RSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
++GVGF DF +L D +LG+ WL LG + D A ME+
Sbjct: 129 ------------VKGVGFHTDFKLLSLGVYDVILGMDWLVTLGTMNIDWAAKWMEY 172
>gi|62734156|gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550571|gb|ABA93368.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C + E+
Sbjct: 382 VNSTPAKILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSMTVEI 441
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 442 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 484
>gi|22539074|gb|AAN01246.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431332|gb|AAP53127.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1045
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 691 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 750
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 751 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 783
>gi|77552428|gb|ABA95225.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 692 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 751
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKL-GKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + G + + +TM Y+G
Sbjct: 752 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVVDCARRTVTM---YRG 796
>gi|38344714|emb|CAE05256.2| OSJNBb0115I09.18 [Oryza sativa Japonica Group]
Length = 1134
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 175 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 234
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 235 QGIPFPSDLILLDSKNLDVILGMNWLAQFQGVV 267
>gi|20042994|gb|AAM08802.1|AC090486_12 putative retroelement [Oryza sativa Japonica Group]
gi|31431155|gb|AAP52977.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1594
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 632 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQVLSLRRSPSVRIEI 691
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 692 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 724
>gi|116308918|emb|CAH66048.1| OSIGBa0131F24.2 [Oryza sativa Indica Group]
Length = 1437
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P SVL
Sbjct: 299 PAPNNSNAPAPKAHVNHVAAAEAQN--APDVVL--------GTFP------VNSIPASVL 342
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 343 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVSSTQYCPSATIEIEEVPFPSSL 402
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 403 ILLESKDLDVILGMDWLSRHRGVI 426
>gi|110289019|gb|ABB47436.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1504
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 401 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 460
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D VLG+ WL + ++
Sbjct: 461 QGIPFPSDLILLDTKNLDVVLGMNWLAQFQGVV 493
>gi|51091547|dbj|BAD36284.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1620
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 524 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 583
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 584 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 616
>gi|110288855|gb|ABB47096.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 987
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 667 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 726
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 727 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 759
>gi|38347301|emb|CAE02296.2| OSJNBa0042F21.3 [Oryza sativa Japonica Group]
gi|38347573|emb|CAE05006.2| OSJNBb0093G06.14 [Oryza sativa Japonica Group]
Length = 1529
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 647 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLIITTPGGVMTAKYYSPAVPIEI 706
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 707 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 739
>gi|22725944|gb|AAN04954.1| Putative retroelement [Oryza sativa Japonica Group]
gi|78708171|gb|ABB47146.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 813
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV----TNLHP 67
++E A L A+ S+FG Y +H L L QT SVE + FE + + V
Sbjct: 167 SVESWAELCVAVNSKFGRDPYQHHLEELENLKQTGSVEECHNKFEELMHLVLVYNRGYDE 226
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
+ F+ GLK I+ + +HKP + A++LA+ E+ L+
Sbjct: 227 TFFVTRFVGGLKADIKLAIKLHKPRTVDAALSLAQTQEELLE 268
>gi|108864166|gb|ABA92236.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1636
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 719 IHSIPATILFDSGASHSFISVTFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 811
>gi|13129464|gb|AAK13122.1|AC080019_14 Polyprotein [Oryza sativa Japonica Group]
Length = 2017
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L IE+ + L+ G + ++ + V E+
Sbjct: 973 IHSIPATILFDSGASHSFISVPFMGRNQLGIERLRNPLLITTPGGVMTAKYYSPAVPIEI 1032
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 1033 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 1065
>gi|38347567|emb|CAE05000.2| OSJNBb0093G06.8 [Oryza sativa Japonica Group]
Length = 1770
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 667 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 726
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 727 QGIPFSSDLILLDTKNLDVILGMNWLAQFQGVV 759
>gi|13992687|gb|AAK51581.1|AC022352_17 Putative retroelement [Oryza sativa Japonica Group]
Length = 959
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 649 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 708
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 709 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 741
>gi|18425257|gb|AAL69435.1|AC098565_17 Putative polyprotein [Oryza sativa]
gi|22725905|gb|AAN04915.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31430208|gb|AAP52154.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1156
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 324 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 383
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG++WL + ++
Sbjct: 384 QGILFPSDLILLDTKNLDVILGMKWLAQFQGVV 416
>gi|288819264|gb|ADC55379.1| gag-pol polyprotein [Oryza brachyantha]
Length = 1393
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+G+TH+++ + L L EK + G + S+ + V E+
Sbjct: 397 VNSVPATILFDSGATHSFISRKFVGMLGLKREKLRDPMRVNTPGHSMFSDLYSPVVPIEI 456
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG F A+ +L+ D +LG+ WL K +I
Sbjct: 457 QGTPFLANLILLESKDLDVILGMDWLTKHQGVI 489
>gi|38347461|emb|CAD40088.2| OSJNBb0012A12.14 [Oryza sativa Japonica Group]
Length = 1075
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 435 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 494
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 495 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 527
>gi|255585541|ref|XP_002533461.1| conserved hypothetical protein [Ricinus communis]
gi|223526694|gb|EEF28930.1| conserved hypothetical protein [Ricinus communis]
Length = 288
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 6 MQTRYRALEEQAA---LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV 62
+Q Y+ EE+ + + SRFGPS + L ++ QT S+ Y FE + RV
Sbjct: 175 LQRSYKQDEEEITWEIFKKELVSRFGPSE--DSGEALSRVKQTGSLRDYIKEFERLSTRV 232
Query: 63 TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
N ++ FI GL+ + ++ P L + + +A+ E KL SIS
Sbjct: 233 ENCPTKDLIQKFIGGLQEETAEYVRMYNPKTLHEMVQIARYAEVKLSRERHSSIS 287
>gi|62733109|gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Query: 167 QTRQEPSEILQEEEILVED------TVPKQLSA--KINNKPLSVLIDTGSTHNYLHPRLA 218
+T P EI QEE + V T P S +IN + L+D+GS ++ A
Sbjct: 409 ETEHAPEEIDQEELMYVSQNAMQGATRPDTFSVIIQINGRRAVGLVDSGSPSTFMDQEYA 468
Query: 219 HFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQ 278
+ T S V V G ++SE + +++QG F F+++ D +LG
Sbjct: 469 IRNDCPLVSTDSKKVVVAGGGELKSEVQVPDILYQIQGETFSNKFNLIPLKGYDIILGAD 528
Query: 279 WLEKLGKIITDHKALTMEFT 298
W+ K I D K + T
Sbjct: 529 WIYKYSPITLDLKKRELGIT 548
>gi|32492194|emb|CAE03534.1| OSJNBa0061C06.22 [Oryza sativa Japonica Group]
gi|39545591|emb|CAE02835.3| OSJNBa0014F04.1 [Oryza sativa Japonica Group]
Length = 1450
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 341 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTLGGVMTAKYYSPAVPIEI 400
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + ++ D+ T+ Y+G
Sbjct: 401 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV-DYARCTVTL-YRG 445
>gi|38347308|emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 1390 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKNYSPAVPIEI 1449
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 1450 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 1482
>gi|55168106|gb|AAV43974.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1568
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 504 PTPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 547
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 548 FDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSL 607
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 608 ILLECKDLDVILGMDWLSRHRGVI 631
>gi|116309157|emb|CAH66257.1| OSIGBa0139I12.6 [Oryza sativa Indica Group]
Length = 1443
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 304 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 347
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 348 LFDSGATHSFLSKSFASKHGIEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSS 407
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 408 LILLESKDLDVILGMDWLSRHRGVI 432
>gi|110289541|gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1477
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 118/322 (36%), Gaps = 68/322 (21%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCFISGLKPTIQNELAIHKPSNLRDA 97
+ QT+SV Y F+ + +R+ + F+ GLK ++ + + +P ++ A
Sbjct: 219 IRQTNSVSEYVERFDCLMHRLLAYDQTVPALYFVTKFVDGLKDEVRRSVMMMRPQDMDVA 278
Query: 98 IALAKLIEDKLQSY-----------NQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPP 146
+LA L E+ ++ N S K T P + TR I
Sbjct: 279 CSLALLQEEAMEGSRPTPYKRTEGSNYVKTSSKLT-APTLSMTREPNQINTEERRTADSN 337
Query: 147 NPSNPPKIALPICR-------------------LTAVEMQTRQEPSEILQ---------- 177
P AL R TAV++ QE E+LQ
Sbjct: 338 RPKEDRLAALKAYRRSKGLCFTCGERWGRDHKCATAVQLHVVQELLEVLQGDSGEDSPTE 397
Query: 178 ----EEEILV-----------EDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
E+I+V E +L I L +LID+GS+H+++ ++ +
Sbjct: 398 SSPEREDIIVMAISQQALNGTESRNSIRLRGWIQGTELLMLIDSGSSHSFIDEKIGKSMS 457
Query: 223 LAIEKTMSFLVAVGNGERIRSEGHCSKV----KFEMQGVGFEADFHILDFSRADAVLGVQ 278
T V + +G E CS+V + QG F DF ++ D +LG+
Sbjct: 458 GVKLLTKPLKVQIADG----GELVCSQVIPNCSWWTQGHNFSNDFKLIPLGGYDIILGMD 513
Query: 279 WLEKLGKIITDHKALTMEFTYK 300
WLE+ + +EF Y+
Sbjct: 514 WLEQYSPMKIYWVNKWVEFQYQ 535
>gi|356503071|ref|XP_003520335.1| PREDICTED: uncharacterized protein LOC100785238 [Glycine max]
Length = 498
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+++ +N + +L+D GSTHN++ R+ FL+LA + T VGNG IR + C K
Sbjct: 191 RITGTVNGHEVVILVDGGSTHNFVQDRMVRFLNLAAQSTPRLTFMVGNGSEIRCD-QCGK 249
>gi|19881710|gb|AAM01111.1|AC098682_15 putative retroelement [Oryza sativa Japonica Group]
Length = 1043
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 12 ALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRV----TNLHP 67
++E A L A+ S+FG Y +H L L QT SVE + FE + + V
Sbjct: 167 SVESWAELCVAVNSKFGRDPYQHHLEELENLKQTGSVEECHNKFEELMHLVLVYNRGYDE 226
Query: 68 DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
+ F+ GLK I+ + +HKP + A++LA+ E+ L+
Sbjct: 227 TFFVTRFVGGLKADIKLAIKLHKPRTVDAALSLAQTQEELLE 268
>gi|77554249|gb|ABA97045.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1474
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S H V+ E+
Sbjct: 371 VNLVPATVLFDSGATHSFLSMSFAGNDGMEVEDLRRHLMVSTPSNQALSLQHSPSVRIEI 430
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 431 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 463
>gi|147863509|emb|CAN79783.1| hypothetical protein VITISV_002632 [Vitis vinifera]
Length = 166
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L+ + P+ VLID+ STHN++ + + L +++ V V +GE++ S G CS
Sbjct: 77 RLAGSLFFHPMEVLIDSWSTHNFISVLVVERVGLNLKQDRKMEVMVASGEKLVSPGRCSN 136
Query: 250 VKFEMQGVGFEADFHIL 266
V+ ++Q V +F IL
Sbjct: 137 VQLKLQKVPIAVEFFIL 153
>gi|38344459|emb|CAE04930.2| OSJNBa0017P10.7 [Oryza sativa Japonica Group]
gi|38345444|emb|CAE03296.2| OSJNBb0046P18.12 [Oryza sativa Japonica Group]
Length = 1469
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 366 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 425
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 426 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 458
>gi|58532065|emb|CAE05987.3| OSJNBa0004L19.16 [Oryza sativa Japonica Group]
Length = 1731
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 662 IHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 721
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 722 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 754
>gi|20451036|gb|AAM22007.1|AC093178_2 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430824|gb|AAP52683.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1229
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 719 VHSIPATILFDSGASHSFVSVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + +++ D T+ Y+G
Sbjct: 779 QGIPFPSDLILLDTKNLDVILGMNWLAQF-QVVVDCARRTVTL-YRG 823
>gi|39545598|emb|CAE02842.3| OSJNBa0014F04.8 [Oryza sativa Japonica Group]
Length = 1429
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + IE L+ + S V+ E+
Sbjct: 595 VNSVPATVLFDSGATHSFLSMSFAGNHGMEIEDLRRPLMVSTPSNQALSLKRSPSVRIEI 654
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 655 QGVSFLANLILLESKDLDVILGMDWLARHKGVI 687
>gi|20177638|gb|AAM14693.1|AC097446_22 Putative polyprotein [Oryza sativa Japonica Group]
gi|110288622|gb|ABB46770.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1630
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q + +V T P +N+ P +VL
Sbjct: 568 PAPNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVL 611
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 612 FDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSL 671
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 672 ILLESKDLDVILGMDWLSRHRGVI 695
>gi|90265089|emb|CAH67761.1| H0124E07.8 [Oryza sativa Indica Group]
Length = 1427
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 461 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 520
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 521 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 553
>gi|32487701|emb|CAE05378.1| OSJNBa0022F16.2 [Oryza sativa Japonica Group]
gi|38346701|emb|CAE02186.2| OSJNBa0080E14.17 [Oryza sativa Japonica Group]
Length = 1494
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 679 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 738
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 739 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 771
>gi|19881755|gb|AAM01156.1|AC113336_8 Putative retroelement [Oryza sativa Japonica Group]
gi|31430462|gb|AAP52371.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 681 IHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 740
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 741 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 773
>gi|20043037|gb|AAM08845.1|AC113337_9 Putative retroelement [Oryza sativa Japonica Group]
Length = 1728
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 702 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 761
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 762 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 794
>gi|77555397|gb|ABA98193.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 688 VHSIPATILFDSGASHSFISVSFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 747
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 748 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 780
>gi|110288682|gb|AAP52358.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1707
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 681 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 740
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 741 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 773
>gi|38344636|emb|CAE05069.2| OSJNBa0094P09.8 [Oryza sativa Japonica Group]
Length = 954
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + +E + V E+
Sbjct: 685 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAEYYSPAVPIEI 744
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +L+ D +LG+ WL + ++
Sbjct: 745 QGIPFPSDLILLNTKNLDVILGMNWLAQFQGVV 777
>gi|78708466|gb|ABB47441.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1802
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L IE+ + L+ G + ++ + V E+
Sbjct: 733 IHSIPATILFDSGASHSFISVPFMGRNQLGIERLRNPLLITTPGGVMTAKYYSPAVPIEI 792
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 793 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 825
>gi|77556045|gb|ABA98841.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 392 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 451
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 452 QGVPFRANLILLESKDLDVILGMDWLARYKGVI 484
>gi|20503033|gb|AAM22721.1|AC092388_5 putative polyprotein [Oryza sativa Japonica Group]
gi|31431879|gb|AAP53591.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 719 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDSKNLDVILGMNWLAQFQGVV 811
>gi|108862403|gb|ABA97246.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1225
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 51/93 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L+D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 163 IHSIPATILLDSGASHSFISVPFMGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 222
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 223 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 255
>gi|38347241|emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
Length = 1466
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 445 VDSTPAKILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 504
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 505 QGMIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 547
>gi|77554522|gb|ABA97318.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1398
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 319 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 378
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 379 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 411
>gi|22725933|gb|AAN04943.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431094|gb|AAP52925.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 700 VHSIPATILFDSGASHSFISVSFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 759
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 760 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 792
>gi|21742535|emb|CAD40160.1| OSJNBb0069N01.2 [Oryza sativa Japonica Group]
gi|38344505|emb|CAE05184.2| OSJNBa0013A04.21 [Oryza sativa Japonica Group]
Length = 1717
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 648 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 707
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + I+
Sbjct: 708 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGIV 740
>gi|38344564|emb|CAD39906.2| OSJNBa0065B15.10 [Oryza sativa Japonica Group]
Length = 1500
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 510 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 569
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 570 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 602
>gi|20177619|gb|AAM14674.1|AC097446_3 Putative polyprotein [Oryza sativa Japonica Group]
gi|22725914|gb|AAN04924.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|110288618|gb|ABB46768.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1433
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 401 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGVVMTAKYYSPAVPIEI 460
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 461 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 493
>gi|1764013|emb|CAB06047.1| COS41.3 [Ciona intestinalis]
Length = 1209
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 69/133 (51%), Gaps = 6/133 (4%)
Query: 160 RLTAVEMQTRQEPS-EILQEEEILV---EDTVPKQLSAKINNKPLSVLIDTGSTHNYLHP 215
R+ A++ Q +P ++Q ++ + P + A + + + VL+D+G++ N+L+
Sbjct: 267 RMMAMDKQDEDQPYLAVMQTPSVVAGAPDCLGPAVVDAIVKGQSIKVLLDSGASDNFLNK 326
Query: 216 RLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF-EADFHILDFSRADAV 274
++AH L+L +EK+ + + NG ++G S + G + F +LD AD +
Sbjct: 327 KVAHRLNLRVEKSSAVIGMATNGLSATTQGRAS-ASISLLGRDYTNVPFQVLDGLCADII 385
Query: 275 LGVQWLEKLGKII 287
LG ++ + ++I
Sbjct: 386 LGHNFMCRHSEVI 398
>gi|108709591|gb|ABF97386.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1200
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 293 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 352
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK 282
QG+ F A+ +L+ D +LG+ WL +
Sbjct: 353 QGLIFPANLILLESKDLDVILGMDWLTR 380
>gi|37991885|gb|AAR06331.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1184
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 293 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 352
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK 282
QG+ F A+ +L+ D +LG+ WL +
Sbjct: 353 QGLIFPANLILLESKDLDVILGMDWLTR 380
>gi|58532064|emb|CAD40396.3| OSJNBa0004L19.15 [Oryza sativa Japonica Group]
Length = 1821
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 718 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 777
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 778 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 810
>gi|38346850|emb|CAD39932.2| OSJNBa0091C12.10 [Oryza sativa Japonica Group]
Length = 1461
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 358 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 417
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 418 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 450
>gi|48843822|gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGSIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|55168124|gb|AAV43991.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1499
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 417 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 476
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 477 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 509
>gi|14018097|gb|AAK52160.1|AC084831_14 putative polyprotein [Oryza sativa Japonica Group]
gi|108709292|gb|ABF97087.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 402 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 461
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 462 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 494
>gi|77554515|gb|ABA97311.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 399 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 459 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 491
>gi|54287545|gb|AAV31289.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1721
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 652 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 711
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 712 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 744
>gi|18425251|gb|AAL69429.1|AC098565_11 Putative polyprotein [Oryza sativa]
gi|31430202|gb|AAP52148.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1788
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 719 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 811
>gi|32489197|emb|CAE04382.1| OSJNBa0027G07.24 [Oryza sativa Japonica Group]
gi|38347091|emb|CAE02563.2| OSJNBa0006M15.6 [Oryza sativa Japonica Group]
Length = 1635
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 664 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 723
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 724 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 756
>gi|356551381|ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
Length = 463
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ KI N + VLID+G++HN++ P++ L L I +++ + +G+G ++ SEG C
Sbjct: 386 KIEGKIENVDVLVLIDSGASHNFISPQVTTALGLTITASVAKHIKLGDGHKVVSEGVCYG 445
Query: 250 VKFEMQGVGFEADFHIL 266
+ G +++ +L
Sbjct: 446 LNLREFATGSTSNWDLL 462
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGL 78
L RA+ +R+G N L + Q SVE + FE + ++V L + L F+SGL
Sbjct: 119 LKRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGL 178
Query: 79 KPTIQNELAIHKPSNLRDAIALAK 102
KP I+ + P N + +AK
Sbjct: 179 KPQIRRRVRTLNPLNRMQMMRIAK 202
>gi|259490591|ref|NP_001159320.1| uncharacterized protein LOC100304412 [Zea mays]
gi|223943397|gb|ACN25782.1| unknown [Zea mays]
Length = 725
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 162 TAVEMQTRQEPSEILQEEEILVEDTVPKQLS--AKINNKPLSVLIDTGSTHNYLHPRLAH 219
+++ QT +EP + E + + + + + K + +L+D+GSTH++++
Sbjct: 437 SSIHEQTLEEPIIMAISAEAVTGSSAKRSMRFLGSMLGKDILILVDSGSTHSFINQSTVQ 496
Query: 220 FLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQW 279
+ F V V NG + + + +QG F D +L + D +LG+ W
Sbjct: 497 HHTIVPVAATPFRVQVANGGLLSCDKMIPHAVWSIQGCEFSQDLRVLPLPKFDLILGMDW 556
Query: 280 LE 281
LE
Sbjct: 557 LE 558
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH--PDAILDC--F 74
L R + RFG Y + LF++ Q SSV YQ F + +++ PD + F
Sbjct: 236 LCRLLHERFGRDQYQSLLRQLFRIHQQSSVTDYQDRFVTLVDQLAVYESVPDPLFFATRF 295
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIED 106
+ GL+ I+ + + +P +L A +LA L E+
Sbjct: 296 VDGLRTDIRAVVMLQRPLDLDSACSLALLQEE 327
>gi|77549436|gb|ABA92233.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1483
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q+ P IL T P +N+ P +VL
Sbjct: 345 PAPNNSNAPAPKARVNHVAAAEAQS--APDVIL--------GTFP------VNSIPATVL 388
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 389 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTLGNQVFSTQYCPSATIEIEEVPFPSSL 448
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 449 ILLESKDLDVILGMDWLSRHRGVI 472
>gi|22857586|gb|AAN09860.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 717 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLTTTPGGVMTAKYYSPAVPIEI 776
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 777 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 809
>gi|58532066|emb|CAI44654.1| OSJNBa0004L19.17 [Oryza sativa Japonica Group]
Length = 1370
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 708 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 767
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 768 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 800
>gi|108708196|gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1748
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 645 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 704
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 705 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 737
>gi|52353559|gb|AAU44125.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1474
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 371 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 430
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 431 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 463
>gi|57863932|gb|AAS90688.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 686 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 745
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 746 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 778
>gi|58532097|emb|CAD40058.3| OSJNBa0085C10.10 [Oryza sativa Japonica Group]
Length = 1785
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 682 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 741
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 742 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 774
>gi|242117532|dbj|BAH80015.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1480
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 377 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 436
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 437 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 469
>gi|116317844|emb|CAH65877.1| OSIGBa0160I04.3 [Oryza sativa Indica Group]
Length = 1786
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 683 IHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 742
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 743 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 775
>gi|116308878|emb|CAH66013.1| OSIGBa0093M15.3 [Oryza sativa Indica Group]
Length = 1317
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 343 PAPNNSNAPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 386
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 387 FDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSATIEIEEVLFPSSL 446
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 447 ILLESKDLDVILGIDWLSRHRGVI 470
>gi|108862564|gb|ABA97616.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1423
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPTVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKL-GKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + G + + +T+ Y+G
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGLVDCARRTVTL---YRG 805
>gi|77555063|gb|ABA97859.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1806
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 718 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 777
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 778 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 810
>gi|38344419|emb|CAE02385.2| OSJNBb0080H08.11 [Oryza sativa Japonica Group]
Length = 1809
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 719 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDTKSLDVILGMNWLAQFQGVV 811
>gi|38347260|emb|CAE05307.2| OSJNBa0056L23.5 [Oryza sativa Japonica Group]
Length = 927
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 682 VHSIPATILFDSGASHSFISVPFVGSNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 741
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 742 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 774
>gi|50878352|gb|AAT85127.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGSIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|38347553|emb|CAD39388.2| OSJNBb0016B03.9 [Oryza sativa Japonica Group]
Length = 1092
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 61 IHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 120
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 121 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 153
>gi|78708033|gb|ABB47008.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGKSQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|77555314|gb|ABA98110.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1226
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q + +V T P +N+ P SVL
Sbjct: 341 PAPNNSNAPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPASVL 384
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 385 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTLGNQVFSTQYCPSATIEIEEVPFPSSL 444
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 445 ILLESKDLDVILGMDWLSRHRGVI 468
>gi|34015085|gb|AAQ56283.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 184 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPVVPIEI 243
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + + + +T+ Y+G
Sbjct: 244 QGIPFPSDLILLDTKNLDVILGMNWLAQFRVVDCARRTVTL---YRG 287
>gi|116311093|emb|CAH68022.1| H0807C06-H0308C08.9 [Oryza sativa Indica Group]
Length = 1804
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 729 IHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 788
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 789 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 821
>gi|108864417|gb|ABA93974.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1343
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGSIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|116317768|emb|CAH65747.1| OSIGBa0102B11.1 [Oryza sativa Indica Group]
Length = 1601
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L R A + +E L+ + S V+ E+
Sbjct: 618 VNSVPATVLFDSGATHSFLSMRFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 677
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 678 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 710
>gi|357516641|ref|XP_003628609.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
gi|355522631|gb|AET03085.1| DNA (cytosine-5)-methyltransferase [Medicago truncatula]
Length = 151
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 6 MQTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNR 61
M ++ + + T+A+E RFGPS+Y NH+A LFKL QT V YQ + R
Sbjct: 12 MHQNHQLFDWNSFFTKALELRFGPSTYANHQAELFKLQQTGLVSEYQEIMHVLSIR 67
>gi|77554650|gb|ABA97446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 744 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 803
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 804 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 836
>gi|110288765|gb|ABG65969.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1502
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 399 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLTTTPGGVMTAKYYSPAVPIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 459 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 491
>gi|50300512|gb|AAT73655.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1747
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 667 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 726
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 727 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 759
>gi|41469587|gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710255|gb|ABF98050.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1294
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 329 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSSQRSPSVRIEI 388
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 389 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 421
>gi|21740445|emb|CAD41630.1| OSJNBa0091D06.6 [Oryza sativa Japonica Group]
Length = 1799
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 696 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYIPAVPIEI 755
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 756 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 788
>gi|77554995|gb|ABA97791.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1791
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 729 IHSIPATILFDSGASHSFISMPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 788
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 789 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 821
>gi|77556493|gb|ABA99289.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1805
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 702 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 761
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 762 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 794
>gi|62733127|gb|AAX95244.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|62734031|gb|AAX96140.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550685|gb|ABA93482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1567
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 761 IHSIPATILFDSGASHSFMSVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSHAVPIEI 820
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 821 QGIPFLSDLILLDTKNLDVILGMNWLAQFQGVV 853
>gi|116310099|emb|CAH67119.1| H0502G05.10 [Oryza sativa Indica Group]
Length = 1826
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 723 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYIPAVPIEI 782
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 783 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 815
>gi|108708199|gb|ABF95994.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1534
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 431 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAQYYSPAVPIEI 490
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 491 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 523
>gi|9294235|dbj|BAB02137.1| unnamed protein product [Arabidopsis thaliana]
Length = 529
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 37/240 (15%)
Query: 33 INHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS 92
+NH+ + SV Y+ FE IC + L + + FI GLKPT+Q+ + K +
Sbjct: 183 VNHQPHYSGIQHEGSVREYRERFEAICLGLVTLPGQHLEEIFIQGLKPTLQDAVRRFKSN 242
Query: 93 NLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPP 152
+ + LA+ +E+ ++ N + T P+
Sbjct: 243 GIVGMMNLAQWLEEASENDNG---TGGDTRAPVSGYR----------------------A 277
Query: 153 KIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNY 212
I +C Q +++ +E+ + I+ +SV ID+G+T+N+
Sbjct: 278 GIEELMCMTMVQGNQEVFSTCGLMKNKEL--------KFFGSISGHHVSVRIDSGATNNF 329
Query: 213 LHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRAD 272
+ LA L ++T V +G+G I+S+ C + G + +I+ F+ +
Sbjct: 330 MPKDLAIHFKLPGKETNLVSVLLGHGLHIKSKEKCMGIG----GTSINWEKNIMSFNHGN 385
>gi|38346484|emb|CAE03723.2| OSJNBa0021F22.17 [Oryza sativa Japonica Group]
Length = 1083
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 564 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMIAKYYSPAVPTEI 623
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D VLG+ WL + ++
Sbjct: 624 QGIPFPSDLILLDTKNLDVVLGMNWLAQFQGVV 656
>gi|284434534|gb|ADB85289.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 397
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
L+ KI ++ L+D+GS+ +++P+L + I + V + + + S+ C
Sbjct: 186 LTLKIGGVKVTALVDSGSSATFVNPKLVTKIPCEIVNHTAIRVMIADRRLMGSDTLCQGC 245
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWL 280
K+E+QG F +D +L + G W+
Sbjct: 246 KYEIQGEKFSSDMRVLPLRGYHVIFGADWI 275
>gi|50300539|gb|AAT73680.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1499
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ + P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 396 VQSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 455
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 456 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 488
>gi|38568042|emb|CAE05353.3| OSJNBa0065J03.12 [Oryza sativa Japonica Group]
Length = 1599
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 652 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 711
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 712 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 744
>gi|38347259|emb|CAE05306.2| OSJNBa0056L23.4 [Oryza sativa Japonica Group]
Length = 1785
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 682 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 741
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 742 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 774
>gi|62733085|gb|AAX95202.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549495|gb|ABA92292.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1795
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 692 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 751
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 752 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 784
>gi|13992680|gb|AAK51574.1|AC022352_10 Putative retroelement [Oryza sativa Japonica Group]
gi|31431004|gb|AAP52842.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1810
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 707 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 766
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 767 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 799
>gi|54287622|gb|AAV31366.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1826
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 746 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 805
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 806 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 838
>gi|53981932|gb|AAV25050.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1804
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|50300553|gb|AAT73694.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1778
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 684 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 743
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 744 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 776
>gi|53981184|gb|AAV24824.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1661
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 577 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 636
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 637 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 669
>gi|77555686|gb|ABA98482.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1803
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 700 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 759
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 760 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 792
>gi|62734325|gb|AAX96434.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550057|gb|ABA92854.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1409
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 405 IHSIPATILFDSGASHSFISVPFMGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 464
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 465 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 497
>gi|54287528|gb|AAV31272.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287632|gb|AAV31376.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1784
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 681 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 740
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 741 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 773
>gi|58531955|emb|CAE03064.2| OSJNBa0089E12.2 [Oryza sativa Japonica Group]
Length = 1764
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 661 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 720
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 721 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 753
>gi|77556441|gb|ABA99237.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 687 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 746
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 747 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 779
>gi|48926660|gb|AAT47449.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1943
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 687 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 746
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 747 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 779
>gi|77552307|gb|ABA95104.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1709
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S VK E+
Sbjct: 747 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVKIEI 806
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 807 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 839
>gi|22857594|gb|AAN09868.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1802
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 699 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 758
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 759 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 791
>gi|90265240|emb|CAH67693.1| H0624F09.1 [Oryza sativa Indica Group]
gi|90399167|emb|CAJ86096.1| H0818H01.18 [Oryza sativa Indica Group]
Length = 1805
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 702 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 761
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 762 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 794
>gi|77555643|gb|ABA98439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 686 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 745
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 746 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 778
>gi|110288767|gb|AAP52585.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1797
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 694 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 753
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 754 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 786
>gi|77555575|gb|ABA98371.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 452
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 140 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQALSLQRSPSVRIEI 199
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 200 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 232
>gi|78708125|gb|ABB47100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 718 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 777
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 778 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 810
>gi|108706366|gb|ABF94161.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1217
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 117/303 (38%), Gaps = 48/303 (15%)
Query: 40 FKLTQTSSVEAYQSTFENICNRVTN----LHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
F + QT SV Y F+ + +++ + L P L F+ GLK I+ + + KP +L
Sbjct: 395 FHVGQTGSVAEYVERFDGLMHQLLSYDNALTPLYFLTKFVDGLKEEIREAVMLQKPIDL- 453
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIA 155
DA L+ +++ ++K+ K T + T LN P P K
Sbjct: 454 DATCSVALLHEEILEGSKKTNYKKGEGTGLHRVFSRPT---LNTAFPKSPVTSPVEDKKG 510
Query: 156 LPICRLT----------------------------------AVEMQTRQEPSEILQEEEI 181
+ R V++Q +E E Q +E
Sbjct: 511 VDSVRTNFRDDKVSALKSYRRVKGLCFTCGERWGKDHKCAQTVQLQVVEELLEAFQIDET 570
Query: 182 ---LVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG 238
+V P + ++ L+ T ST + R+ H L ++ + V + +G
Sbjct: 571 DNTMVTSPEPVLENNQLMAISLNAYNGTDSTRSL---RIVHHLQGVVKLPVPVKVTIADG 627
Query: 239 ERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
++ E + +QG ++++F +L S DA+LG+ WL LG + D + +E+
Sbjct: 628 GLLQCEKQLPDCAWWLQGRCYKSNFKLLPLSGYDAILGMDWLVGLGVMKIDWEQKWLEYL 687
Query: 299 YKG 301
G
Sbjct: 688 DNG 690
>gi|62733632|gb|AAX95749.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|110288789|gb|AAP52632.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1608
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 581 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 640
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L+ D +LG+ WL K G I +K +T+ +Y G
Sbjct: 641 QGVPFLANLILLESKDLDVILGMDWLAKHKGVIDCANKKVTLT-SYDG 687
>gi|50300545|gb|AAT73686.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1498
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 395 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 454
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 455 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 487
>gi|57834136|emb|CAE05577.3| OSJNBa0032N05.5 [Oryza sativa Japonica Group]
Length = 1790
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 687 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 746
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 747 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 779
>gi|38344634|emb|CAE05067.2| OSJNBa0094P09.6 [Oryza sativa Japonica Group]
Length = 1803
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 700 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 759
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 760 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 792
>gi|13992691|gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
Length = 1862
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 759 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 818
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 819 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 851
>gi|78708041|gb|ABB47016.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 746 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 805
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 806 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 838
>gi|78708035|gb|ABB47010.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1796
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 693 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 752
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 753 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 785
>gi|50878387|gb|AAT85162.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1152
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%)
Query: 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVG 258
P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+QG+
Sbjct: 728 PATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIP 787
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKII 287
F +D +LD D +LG+ WL + ++
Sbjct: 788 FPSDLILLDTKNLDVILGMNWLAQFQGVV 816
>gi|50300503|gb|AAT73646.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1764
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 661 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 720
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 721 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 753
>gi|52353726|gb|AAU44292.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1816
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 713 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 772
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 773 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 805
>gi|38346425|emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]
Length = 1525
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+ + R A L++ K + G + + +C V E+
Sbjct: 408 VNSTPAVILFDSGATHSLISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 468 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 510
>gi|22725935|gb|AAN04945.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431096|gb|AAP52927.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1825
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 722 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 781
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 782 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 814
>gi|22539073|gb|AAN01245.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431331|gb|AAP53126.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1785
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 682 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 741
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 742 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 774
>gi|22138463|gb|AAM93447.1| putative polyprotein [Oryza sativa Japonica Group]
gi|78708018|gb|ABB46993.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1499
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 396 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 455
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 456 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 488
>gi|21743214|emb|CAD40069.1| OSJNBa0085C10.22 [Oryza sativa Japonica Group]
Length = 1639
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 47/89 (52%)
Query: 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVG 258
P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+QG+
Sbjct: 599 PATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGDMTAKYYSPAVPIEIQGIP 658
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKII 287
F +D +LD D +LG+ WL + ++
Sbjct: 659 FPSDLILLDTKNLDVILGMNWLAQFQGVV 687
>gi|77555003|gb|ABA97799.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1757
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V ++
Sbjct: 719 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPMDI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 811
>gi|39546203|emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group]
Length = 1462
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F + +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPTNLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|21743213|emb|CAD40068.1| OSJNBa0085C10.21 [Oryza sativa Japonica Group]
Length = 1825
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 722 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 781
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 782 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 814
>gi|110288804|gb|ABG65986.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1840
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 169 RQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKT 228
R + + E+E+ D + +++ P ++L D+G++H+++ L +E+
Sbjct: 713 RGRVNHVTAEDELTTPDVIVGTFL--VHSIPATILFDSGASHSFISVPFVGKNQLGVERL 770
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ L+ G + ++ + V E+QG+ F +D +LD D +LG+ WL + ++
Sbjct: 771 RNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 829
>gi|50897320|gb|AAT85771.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108709111|gb|ABF96906.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1169
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 80 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 139
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG+ F +D +LD D +LG+ WL + + + D T+ Y+G
Sbjct: 140 QGIPFPSDLILLDTKNLDVILGMNWLAQF-QCVVDCARCTVTL-YRG 184
>gi|21672037|gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31431043|gb|AAP52881.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1821
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 718 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPTVPIEI 777
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 778 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 810
>gi|116311097|emb|CAH68025.1| OSIGBa0136O08-OSIGBa0153H12.3 [Oryza sativa Indica Group]
Length = 1826
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 723 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 782
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 783 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 815
>gi|108862685|gb|ABA98546.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 723 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 782
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 783 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 815
>gi|62733030|gb|AAX95147.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549641|gb|ABA92438.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1535
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + IE L+ + V+ E+
Sbjct: 368 VNSVPATVLFDSGATHSFLSMSFAGNHGMEIEDLRRPLMVSAPSNQALLSQRSPSVRIEI 427
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ + D +LG+ WL + +I
Sbjct: 428 QGVPFLANLILLESNDLDVILGMDWLARYKGVI 460
>gi|22725911|gb|AAN04921.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31430214|gb|AAP52160.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1786
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 683 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 742
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 743 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 775
>gi|116317857|emb|CAH65888.1| OSIGBa0096I22.1 [Oryza sativa Indica Group]
Length = 1635
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 639 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 698
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 699 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 731
>gi|55168118|gb|AAV43985.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55168194|gb|AAV44060.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1772
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 676 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 735
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 736 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 768
>gi|57834137|emb|CAE05578.3| OSJNBa0032N05.6 [Oryza sativa Japonica Group]
Length = 1528
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ G + S V+ E+
Sbjct: 490 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPGNQALSLQRSPSVRIEI 549
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 550 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 582
>gi|21741597|emb|CAD39713.1| OSJNBa0052P16.18 [Oryza sativa Japonica Group]
Length = 1804
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|77556043|gb|ABA98839.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1756
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 700 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 759
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 760 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 792
>gi|62732761|gb|AAX94880.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549451|gb|ABA92248.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1849
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 746 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 805
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 806 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 838
>gi|54287627|gb|AAV31371.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 717 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 776
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 777 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 809
>gi|77555576|gb|ABA98372.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1800
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 697 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 756
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 757 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 789
>gi|77551535|gb|ABA94332.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1668
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + ++ G + ++ + V E+
Sbjct: 666 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPMLITTPGGVMTAKFYSPAVPIEI 725
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 726 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 758
>gi|307135777|gb|ADN33669.1| ty3-gypsy retroelement transposase [Cucumis melo subsp. melo]
Length = 710
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ K+ N+ + VLID +THN++ +L L+L ++ T S+ V +G G I+ +G C K
Sbjct: 2 KVKGKVKNEDVVVLIDCWATHNFISEKLVSDLNLPLKSTSSYKVILGLGVAIKGKGICGK 61
Query: 250 VKFEMQGVGFEADFHILD 267
V+ + D+ ++D
Sbjct: 62 VEVLL------GDWKVVD 73
>gi|38344635|emb|CAE05068.2| OSJNBa0094P09.7 [Oryza sativa Japonica Group]
Length = 1804
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGILFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|38346259|emb|CAE02081.2| OSJNBa0074B10.9 [Oryza sativa Japonica Group]
Length = 1659
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 537 PTPNNSNVPAPKARVNHVVAAEAQN--APDVVL--------GTFP------VNSIPATVL 580
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 581 FDSGATHSFLSKSFASNHGMEVVSLGRSLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 640
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 641 ILLESKDLDVILGMDWLSRHRGVI 664
>gi|108708189|gb|ABF95984.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|21671935|gb|AAM74297.1|AC083944_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 974
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
P P+NP + P R+ V Q ++ V T P +N+ P +VL D
Sbjct: 343 PVPNNP-NVPAPKARVNHVAAAEAQNAPDV-------VLGTFP------VNSIPATVLFD 388
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 389 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSLIL 448
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 449 LESKDLDVILGMDWLSRHRGVI 470
>gi|38567665|emb|CAE75948.1| B1159F04.11 [Oryza sativa Japonica Group]
Length = 1679
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P + L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 704 IHSVPATTLFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 763
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 764 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 796
>gi|110288697|gb|ABB46940.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1244
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
P P+NP + P R+ V Q ++ V T P +N+ P +VL D
Sbjct: 626 PVPNNP-NVPAPKARVNHVAAAEAQNAPDV-------VLGTFP------VNSIPATVLFD 671
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 672 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSLIL 731
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 732 LESKDLDVILGMDWLSRHRGVI 753
>gi|108708200|gb|ABF95995.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1804
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 701 VHSIPATILFDSGASHSFISVPFVGKNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 760
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 761 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 793
>gi|116308880|emb|CAH66015.1| OSIGBa0093M15.5 [Oryza sativa Indica Group]
Length = 986
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
P P+NP I P R+ V Q ++ V T P +N+ P +VL D
Sbjct: 343 PVPNNP-NIPAPKARVNHVAAAEAQNAPDV-------VLGTFP------VNSIPATVLFD 388
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 389 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEEVLFPSSLIL 448
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 449 LESKDLDVILGMDWLSRHRGVI 470
>gi|77555127|gb|ABA97923.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1758
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 689 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 748
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 749 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 781
>gi|38346698|emb|CAE02183.2| OSJNBa0080E14.14 [Oryza sativa Japonica Group]
Length = 806
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 367 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLHRSPSVRIEI 426
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 427 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 459
>gi|38347631|emb|CAE05227.2| OSJNBa0011K22.9 [Oryza sativa Japonica Group]
Length = 1699
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P + L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 724 IHSVPATTLFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 783
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 784 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 816
>gi|32487330|emb|CAE05905.1| OSJNBa0061C08.12 [Oryza sativa Japonica Group]
Length = 1971
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 630 IHSIPATILFDSGASHSFISVPFMGRNQLGVERIRNPLLITTPGGVMTAKYNSPAVPIEI 689
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 690 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 722
>gi|32400679|gb|AAP80589.1|AF277102_1 protease [Gossypium hirsutum]
Length = 113
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEGHCSKVKFE 253
I N P + LID STH+Y+ ++ L + +E+T S + + G+ + + V E
Sbjct: 11 IYNVPYTTLIDIRSTHSYIACNVSKTLDILVERTASEVTVLSPLGQFVMVDKLFKDVPLE 70
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEK 282
+QGV F AD L F D +L + WL K
Sbjct: 71 VQGVIFLADLMELLFGEFDLILRMDWLVK 99
>gi|70720828|emb|CAI44646.2| OSJNBa0057M08.21 [Oryza sativa Japonica Group]
Length = 1202
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 600 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 659
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 660 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 692
>gi|77554997|gb|ABA97793.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1435
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 403 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTTKYYSPAVPIEI 462
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 463 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 495
>gi|116309194|emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa Indica Group]
Length = 1433
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 343 PVPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 386
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G + S +C V E++ V F +
Sbjct: 387 FDSGATHSFLSKSFASKHGMEVVSLGRPLLVNSPGNQAFSTQYCPSVTIEIEEVPFPSSL 446
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 447 ILLESKDLDVILGMDWLSRHRGVI 470
>gi|57834100|emb|CAE04765.3| OSJNBa0079C19.6 [Oryza sativa Japonica Group]
Length = 1998
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 657 IHSIPATILFDSGASHSFISVPFMGRNQLGVERIRNPLLITTPGGVMTAKYNSPAVPIEI 716
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 717 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 749
>gi|116308973|emb|CAH66097.1| OSIGBa0114I04.4 [Oryza sativa Indica Group]
Length = 1455
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 344 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 387
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH+++ A + + L+ G ++ S +C E++ V F +
Sbjct: 388 LFDSGATHSFMSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSS 447
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 448 LILLESKDLDVILGMDWLSRHRGVI 472
>gi|38346421|emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]
Length = 1616
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S VK E+
Sbjct: 513 VNSVPATVLFDSGATHSFLSMSFAGNHEMEVEDLRRPLMVSTPSNQALSLQRSPSVKIEI 572
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 573 QGVPFLANLILLKSKDLDVILGMDWLARHKGVI 605
>gi|116309029|emb|CAH66143.1| OSIGBa0114M03.1 [Oryza sativa Indica Group]
Length = 1571
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 563 VNSVPATVLFDSGATHSFLSMSFAGNHGMKVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 622
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 623 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 655
>gi|32489966|emb|CAE05583.1| OSJNBa0032N05.11 [Oryza sativa Japonica Group]
Length = 1412
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L+ D +LG+ WL + G I +K +T+ +Y G
Sbjct: 430 QGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLT-SYDG 476
>gi|242117516|dbj|BAH79999.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1374
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 403 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 462
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D ++D D +LG+ WL + ++
Sbjct: 463 QGIPFPSDLILVDTKNLDVILGMNWLAQFQGVV 495
>gi|77556423|gb|ABA99219.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2360
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|116308831|emb|CAH65969.1| H0820C10.2 [Oryza sativa Indica Group]
Length = 1685
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S VK E+
Sbjct: 582 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVKIEI 641
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 642 QGVPFLANLILLKSKDLDVILGMDWLARHKSVI 674
>gi|384496338|gb|EIE86829.1| hypothetical protein RO3G_11540 [Rhizopus delemar RA 99-880]
Length = 760
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
I +P LID+G++ NY+HP++ A + V NGE+ I E C+ +K
Sbjct: 365 IQGQPYYALIDSGASANYIHPKVLKNAD-AFRSINNQAVETANGEQTMITGEATCT-MKI 422
Query: 253 EMQGVGFEADFHILDF-SRADAVLGVQWLEKL 283
E +G F F F S+ D +LG +WL+++
Sbjct: 423 EGEGKNFIDTFKAFVFESKFDIILGNEWLKRI 454
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 23 IESRFGPS-SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
+E F PS S R L + QTSS+ Y F++I + + D LD F+ GLK
Sbjct: 108 LEYAFKPSYSEQAARDRLANIKQTSSITEYADAFQDILLDLPRVSDDEALDRFVRGLKDK 167
Query: 82 IQNELAIHKPSNLRDAI 98
+ + +P +L +AI
Sbjct: 168 ARIHVLTREPRSLEEAI 184
>gi|31126663|gb|AAP44586.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108709242|gb|ABF97037.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1436
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 371 VNSVPATVLFDSGATHSFLSMGFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 430
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 431 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 463
>gi|21671891|gb|AAM74253.1|AC074355_15 Putative retroelement [Oryza sativa Japonica Group]
gi|31430430|gb|AAP52347.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1140
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 205 PTPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 248
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 249 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 308
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 309 ILLESKDLDVILGMDWLSRHRGVI 332
>gi|62733376|gb|AAX95493.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62734610|gb|AAX96719.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550245|gb|ABA93042.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1497
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 612 IHSIPATILFDSGASHSFISVPFMGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 671
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F D +LD + D +LG+ WL + ++
Sbjct: 672 QGIPFPLDLILLDTNNLDVILGMNWLAQFQGVV 704
>gi|54287531|gb|AAV31275.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287635|gb|AAV31379.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1417
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H ++ L +E+ + L+ G + ++ + V E+
Sbjct: 169 VHSIPATILFDSGASHWFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 228
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 229 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 261
>gi|77555395|gb|ABA98191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1412
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 369 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQALSLQRSPSVRIEI 428
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 429 QGVPFLANLILLKSKDLDVILGMDWLARHKGVI 461
>gi|116308971|emb|CAH66095.1| OSIGBa0114I04.2 [Oryza sativa Indica Group]
Length = 1361
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|108862342|gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 304 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 363
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L+ D +LG+ WL + G I +K +T+ +Y G
Sbjct: 364 QGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLT-SYDG 410
>gi|38347272|emb|CAE05319.2| OSJNBa0056L23.17 [Oryza sativa Japonica Group]
Length = 963
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN S+ P + + A E Q + +V T P +N+ P +VL
Sbjct: 507 PAPNNSSAPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVL 550
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C V E++ V F +
Sbjct: 551 FDSGATHSFLSKSFASNHGIEVISLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSSL 610
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 611 ILLESKDLDVILGMDWLSRHRGVI 634
>gi|62733144|gb|AAX95261.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|62733825|gb|AAX95934.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550593|gb|ABA93390.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1398
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 341 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSAPSNQALSLQRSPSVRIEI 400
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 401 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 433
>gi|20177631|gb|AAM14686.1|AC097446_15 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430230|gb|AAP52176.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1859
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ V E+
Sbjct: 815 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYFSPAVPIEI 874
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 875 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 907
>gi|22539088|gb|AAN01260.1| Putative retroelement [Oryza sativa Japonica Group]
gi|31431346|gb|AAP53141.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1683
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 645 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 704
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 705 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 737
>gi|20143546|gb|AAM12303.1|AC091680_4 putative polyprotein [Oryza sativa Japonica Group]
Length = 1658
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ CS+V +
Sbjct: 761 VNSAPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRDIRATKICSEVNLRI 820
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I +++T++
Sbjct: 821 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAERSITLQ 863
>gi|357470935|ref|XP_003605752.1| Pol polyprotein [Medicago truncatula]
gi|355506807|gb|AES87949.1| Pol polyprotein [Medicago truncatula]
Length = 745
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCSKV 250
+ INN PL +IDTG+TH ++ L L + + +V + + C K
Sbjct: 340 TCYINNTPLVAIIDTGATHCFIAFDCVSALGLDLSDMNGEMVVETPAKGSVTTSLVCLKC 399
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G FE D L S D +LG+ WLE
Sbjct: 400 PLSMFGRDFEMDLVCLPLSGMDVILGMNWLE 430
>gi|242117543|dbj|BAH80026.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1666
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q P +L T P +N+ P +VL D
Sbjct: 568 PNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVLFD 611
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 612 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSLIL 671
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 672 LESKDLDVILGMDWLSRHRGVI 693
>gi|449445212|ref|XP_004140367.1| PREDICTED: uncharacterized protein LOC101210426 [Cucumis sativus]
Length = 497
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 226 EKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGK 285
EKT F V +G+G + +G C +V+ ++ + ADF + R D VLG+QWL G
Sbjct: 194 EKT-KFGVTIGDGTALEGKGVCKRVEVKLPELKIVADFLAIKLGRIDVVLGMQWLSTTGF 252
Query: 286 IITDHKALTMEF 297
+ +TM F
Sbjct: 253 MGVHWPTMTMTF 264
>gi|38344461|emb|CAE04932.2| OSJNBa0017P10.9 [Oryza sativa Japonica Group]
Length = 1752
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 650 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 709
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 710 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 742
>gi|110288769|gb|ABG65971.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1475
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 372 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 432 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 464
>gi|110289463|gb|AAP54732.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1663
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ CS+V +
Sbjct: 766 VNSAPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRDIRATKICSEVNLRI 825
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I +++T++
Sbjct: 826 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAERSITLQ 868
>gi|22857578|gb|AAN09852.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1715
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 612 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 671
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 672 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 704
>gi|116309024|emb|CAH66139.1| H0616A11.3 [Oryza sativa Indica Group]
Length = 1451
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q P +L T P +N+ P +VL D
Sbjct: 345 PNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVLFD 388
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 389 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTRYCPSVTIEIEEVPFPSSLIL 448
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 449 LESKDLDVILGMDWLSRHRGVI 470
>gi|108708504|gb|ABF96299.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1822
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 719 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L+ D +LG+ WL + G I +K +T+ +Y G
Sbjct: 779 QGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLT-SYDG 825
>gi|54287530|gb|AAV31274.1| putative polyprotein [Oryza sativa Japonica Group]
gi|54287634|gb|AAV31378.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1400
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|108862750|gb|ABA98741.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1678
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 601 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 660
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 661 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 693
>gi|38347247|emb|CAD39360.2| OSJNBa0059H15.11 [Oryza sativa Japonica Group]
Length = 585
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E ++ + S V+ E+
Sbjct: 328 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPMMVSTPSNQALSLQRSPSVRIEI 387
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 388 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 420
>gi|218198468|gb|EEC80895.1| hypothetical protein OsI_23541 [Oryza sativa Indica Group]
Length = 351
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD-AILDCFISGLKPTIQ 83
+++GP N L +L+Q+++V YQ F + +RVT+L + + F +GL+ I
Sbjct: 216 TQYGPPIRNNPLGELKRLSQSTTVATYQQRFLALSSRVTDLLTERQQVQLFTAGLRDDIC 275
Query: 84 NELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
++ +H+P +L++A+ LA+ E K +++S
Sbjct: 276 IDVELHQPEDLQEAMGLARAYERKANFSPSRTVS 309
>gi|108862626|gb|ABA98029.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1541
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 590 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 649
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 650 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 682
>gi|90265093|emb|CAH67706.1| H0512B01.1 [Oryza sativa Indica Group]
Length = 1454
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 62/144 (43%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 343 PVPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 386
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G + S +C V E++ V F +
Sbjct: 387 FDSGATHSFLSKSFASKHGMEVVSFGRPLLVNTPGNQAFSTRYCPSVTIEIEEVPFPSSL 446
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 447 ILLESKDLDVILGMDWLSRHRGVI 470
>gi|46485886|gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1678
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 575 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 634
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 635 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 667
>gi|110288626|gb|ABB46774.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1695
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 592 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 651
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 652 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 684
>gi|38344597|emb|CAD39969.2| OSJNBa0072D08.2 [Oryza sativa Japonica Group]
Length = 1712
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 609 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 668
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 669 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 701
>gi|116310126|emb|CAH67143.1| OSIGBa0130P02.7 [Oryza sativa Indica Group]
Length = 1741
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 638 VNSVPATVLFDSGATHSFLSMSFAGNHEMEVEDLRRPLMISTPSNQALSLQRSPSVRIEI 697
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 698 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 730
>gi|90265088|emb|CAH67760.1| H0124E07.7 [Oryza sativa Indica Group]
Length = 1430
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 369 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLHRSPSVRIEI 428
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 429 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 461
>gi|20177640|gb|AAM14695.1|AC097446_24 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1680
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 577 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 636
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 637 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 669
>gi|22725913|gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1729
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 729 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPYVRIEI 788
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 789 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 821
>gi|110288617|gb|AAP52162.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1730
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 729 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPYVRIEI 788
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 789 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 821
>gi|77554975|gb|ABA97771.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2174
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 1071 VNSVPATVLFDSGATHSFLSTSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 1130
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 1131 QGVPFLANLILLKSKDLDVILGMDWLARHKGVI 1163
>gi|384485811|gb|EIE77991.1| hypothetical protein RO3G_02695 [Rhizopus delemar RA 99-880]
Length = 1411
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
I +P LID+G++ NY+HP++ A + V NGE+ I E C+ +K
Sbjct: 365 IQGQPYYALIDSGASANYIHPKVLKNAD-AFRSINNQAVETANGEQTMITGEATCT-MKI 422
Query: 253 EMQGVGFEADFHILDF-SRADAVLGVQWLEKL 283
E +G F F F S+ D +LG +WL+++
Sbjct: 423 EGEGKNFIDTFKAFVFESKFDIILGNEWLKRI 454
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 23 IESRFGPS-SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
+E F PS S R L + QTSS+ Y F++I + + D LD F+ GLK
Sbjct: 108 LEYAFKPSYSEQAARDRLANIKQTSSITEYADAFQDILLDLPRVSDDEALDRFVRGLKDK 167
Query: 82 IQNELAIHKPSNLRDAI 98
+ + +P +L +AI
Sbjct: 168 ARIHVLTREPRSLEEAI 184
>gi|384493974|gb|EIE84465.1| hypothetical protein RO3G_09175 [Rhizopus delemar RA 99-880]
Length = 1411
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
I +P LID+G++ NY+HP++ A + V NGE+ I E C+ +K
Sbjct: 365 IQGQPYYALIDSGASANYIHPKVLKNAD-AFRSINNQAVETANGEQTMITGEATCT-MKI 422
Query: 253 EMQGVGFEADFHILDF-SRADAVLGVQWLEKL 283
E +G F F F S+ D +LG +WL+++
Sbjct: 423 EGEGKNFIDTFKAFVFESKFDIILGNEWLKRI 454
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 23 IESRFGPS-SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
+E F PS S R L + QTSS+ Y F++I + + D LD F+ GLK
Sbjct: 108 LEYAFKPSYSEQAARDRLANIKQTSSITEYADAFQDILLDLPRVSDDEALDRFVRGLKDK 167
Query: 82 IQNELAIHKPSNLRDAI 98
+ + +P +L +AI
Sbjct: 168 ARIHVLTREPRSLEEAI 184
>gi|62733140|gb|AAX95257.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550597|gb|ABA93394.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 626 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 685
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 686 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 718
>gi|22138474|gb|AAM93458.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430677|gb|AAP52558.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1406
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 303 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 362
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 363 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 395
>gi|77551176|gb|ABA93973.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 714
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N++P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 456 VNSEPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 515
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 516 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQINCAEKSITLQ 558
>gi|242117488|dbj|BAH79971.1| hypothetical protein [Oryza sativa Indica Group]
Length = 1477
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 374 VNSVPATVLFDSGATHSFLSLSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 433
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 434 QGVPFLANLILLESKDLDVILGMDWLTRHKGVI 466
>gi|116309186|emb|CAH66282.1| OSIGBa0116O04.4 [Oryza sativa Indica Group]
Length = 1527
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q + +V T P +N+ P +VL D
Sbjct: 605 PNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVLFD 648
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 649 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSSLIL 708
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 709 LESKDLDVILGMDWLSRHRGVI 730
>gi|116309037|emb|CAH66150.1| OSIGBa0097I11.2 [Oryza sativa Indica Group]
Length = 1527
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q + +V T P +N+ P +VL D
Sbjct: 605 PNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVLFD 648
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 649 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSSLIL 708
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 709 LESKDLDVILGMDWLSRHRGVI 730
>gi|34015295|gb|AAQ56486.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 2032
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 1003 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 1062
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 1063 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 1095
>gi|77555016|gb|ABA97812.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1702
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q +V T P +N+ P +VL
Sbjct: 564 PAPNNSNVPVPKARVNHVVAAEAQN----------APYVVLGTFP------VNSIPATVL 607
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 608 FDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 667
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 668 ILLESKDLDVILGMDWLSRHRGVI 691
>gi|62733811|gb|AAX95920.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|62734057|gb|AAX96166.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550628|gb|ABA93425.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 919
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 338 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSLSVRIEI 397
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 398 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 430
>gi|77555470|gb|ABA98266.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1473
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L D +LG+ WL + G I +K +T+ +Y G
Sbjct: 430 QGVPFLANLILLKSKDLDVILGMDWLARHKGVIDCANKKVTLN-SYDG 476
>gi|116309189|emb|CAH66284.1| OSIGBa0161P06.1 [Oryza sativa Indica Group]
Length = 1665
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + + L+ G ++ S +C V E+
Sbjct: 562 VNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEI 621
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F + +L+ D +LG+ WL + +I
Sbjct: 622 EEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 654
>gi|77551190|gb|ABA93987.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1485
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 215 PRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAV 274
P+L++ + L + SF V V NG+ + E + V + +QG F + +L D +
Sbjct: 501 PQLSNLIQLPV----SFQVKVANGQMLSCETELANVSWSVQGHHFCSALKVLPLQSYDMI 556
Query: 275 LGVQWLEKLGKIITDHKALTMEFT 298
LG+ WLE+ + D + T+ FT
Sbjct: 557 LGMDWLERYSPMDIDWQQKTIRFT 580
>gi|116309001|emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa Indica Group]
Length = 1481
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + + L+ G ++ S +C V E+
Sbjct: 378 VNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEI 437
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F + +L+ D +LG+ WL + +I
Sbjct: 438 EEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 470
>gi|242826075|ref|XP_002488568.1| retrovirus polyprotein, putative [Talaromyces stipitatus ATCC
10500]
gi|218712386|gb|EED11812.1| retrovirus polyprotein, putative [Talaromyces stipitatus ATCC
10500]
Length = 1757
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEGHCS 248
+++A I + ++ID+G+T NY+ PR L + K + + G NGE++ EG
Sbjct: 578 KITANILGSDVRIMIDSGATGNYMDPRTQEKLQILGRKKPTPIPLTGLNGEKLSEEGITD 637
Query: 249 KVKF---EMQGVGFEADFHILDFSRADAVLGVQWLEK 282
+ + + G +F I R D +LG+ WL K
Sbjct: 638 ETGWLAMSIDGHLEMINFDIAKLGRDDVILGIPWLRK 674
>gi|62733790|gb|AAX95899.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549663|gb|ABA92460.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G TH++L A + +E L+ + S V+ E+
Sbjct: 621 VNSVPATVLFDSGGTHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 680
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 681 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 713
>gi|38346279|emb|CAE03982.2| OSJNBa0033H08.10 [Oryza sativa Japonica Group]
Length = 637
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
+E RFGP N TL +L +T SV YQ F ++ +R L ++ F +GL+ +
Sbjct: 266 VELRFGPPLRHNKLGTLAELRRTGSVADYQEKFMSLLSRAGPLMEVQKIELFTAGLQGKL 325
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQ 109
+ ++ + P+ L A++LA+ E ++Q
Sbjct: 326 RIDVELEAPALLDTAMSLARAYELRVQ 352
>gi|28209485|gb|AAO37503.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1079
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ A L++ K + G + + +C V E+
Sbjct: 407 VNSTPAVILFDSGATHSFISKLFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPAVTVEI 466
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 467 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 509
>gi|31431236|gb|AAP53044.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1094
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 KGVPFLANLILLESKDFDVILGMDWLARHKGVI 462
>gi|116309187|emb|CAH66283.1| OSIGBa0116O04.5 [Oryza sativa Indica Group]
Length = 1477
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q + +V T P +N+ P +VL D
Sbjct: 555 PNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVLFD 598
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 599 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSSLIL 658
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 659 LESKDLDVILGMDWLSRHRGVI 680
>gi|62734416|gb|AAX96525.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550230|gb|ABA93027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1506
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK-TMSFLVAVGNGERIRSEGHCSKVKFE 253
+N+ P +L D+G+TH+++ R A L++ K + V G + + +C + E
Sbjct: 501 VNSTPTVILFDSGATHSFISKRFAGAHELSLVKLKIPMRVHTPRGG-MTTTHYCPSMTVE 559
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 560 IQGLIFPANLILLESKDLDVILGMDWLTRHKGVI-DCASRTIKLT 603
>gi|116309038|emb|CAH66151.1| OSIGBa0097I11.3 [Oryza sativa Indica Group]
Length = 1477
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q + +V T P +N+ P +VL D
Sbjct: 555 PNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVLFD 598
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C V E++ V F + +
Sbjct: 599 SGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVLFPSSLIL 658
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 659 LESKDLDVILGMDWLSRHRGVI 680
>gi|108863002|gb|ABA99486.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D G+TH++L A + +E L+ + S V+ E+
Sbjct: 594 VNSVPATVLFDFGATHSFLSMSFAGNHGMEVEDLRCPLMVSTPSNQALSLQRSPSVRIEI 653
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 654 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 686
>gi|110288865|gb|ABB47143.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1020
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 588 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 647
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 648 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 680
>gi|38344156|emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ + + L+D+GST+ +++ A I + V V G + S +++++
Sbjct: 496 VKGRKVVALVDSGSTNTFMNYEFALRSGCEIIEFDHNRVMVAGGGILNSTAKTEVIQYKV 555
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG F F ++ D VLG W+ + I D K T+ TYKG
Sbjct: 556 QGYLFGKAFQLIPLKGYDIVLGADWIYEHSPINLDLKQRTLTVTYKG 602
>gi|116317875|emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
Length = 1481
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + + L+ G ++ S +C V E+
Sbjct: 378 VNSIPATVLFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEI 437
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F + +L+ D +LG+ WL + +I
Sbjct: 438 EEVPFPSSLILLESKDLDVILGMDWLSRHRGVI 470
>gi|50300548|gb|AAT73689.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1516
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGMHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|22725934|gb|AAN04944.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1078
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 588 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 647
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 648 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 680
>gi|38346366|emb|CAE04203.2| OSJNBa0011E07.12 [Oryza sativa Japonica Group]
Length = 1473
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQTLSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|77555354|gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1480
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKINGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKL-GKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWLAKQKGQIDCAEKSITLQ 579
>gi|108708773|gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1548
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +L D+G+TH+++ A L++ K + G + + +C V E+
Sbjct: 445 VNSTPAVILFDSGATHSFISKLFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPAVTVEI 504
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 505 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 547
>gi|20177617|gb|AAM14672.1|AC097446_1 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1342
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 342 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPYVRIEI 401
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 402 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 434
>gi|116308884|emb|CAH66018.1| OSIGBa0105N24.2 [Oryza sativa Indica Group]
Length = 1608
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N P +VL
Sbjct: 512 PAPNNSNIPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNFIPATVL 555
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 556 FDSGATHSFLSKSFASNQGMEVISLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 615
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 616 ILLESKDRDVILGMDWLSRHRGVI 639
>gi|38345526|emb|CAD41296.2| OSJNBa0020J04.1 [Oryza sativa Japonica Group]
Length = 1763
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
PPP P+N K + R+ V + ++L ++V + I++ P ++L
Sbjct: 713 PPPRPNNDGKDVI-WGRVNHVTAE------DVLTTPNVIVGTFL-------IHSIPTTIL 758
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G++H+++ L +E+ + L+ + ++ + V E+QG+ F +D
Sbjct: 759 FDSGASHSFISVPFVGRNQLGVERLRNSLLITTPRGVMTAKYYSPAVPIEIQGIPFPSDL 818
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+LD D +LG+ WL + ++
Sbjct: 819 ILLDTKNLDVILGMNWLAQFQGVV 842
>gi|78708216|gb|ABB47191.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1443
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ ++ S V+ E+
Sbjct: 340 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSDQALSLQRSPSVRIEI 399
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 400 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 432
>gi|449463685|ref|XP_004149562.1| PREDICTED: isovaleryl-CoA dehydrogenase, mitochondrial-like
[Cucumis sativus]
Length = 787
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 173 SEILQEEEILVEDTVPK----------QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
+E++QEE+ +VE ++ ++ K+ K + VLID G+THN++ L L
Sbjct: 323 AEVIQEEQAVVELSINSVVGLSNPGTMKVKGKLLGKEIIVLIDCGATHNFISESLVEELQ 382
Query: 223 LAIEKTMSFLVAVGNGERIRSEG 245
++ + T ++ V +G+G I+ +G
Sbjct: 383 ISTKSTTNYGVILGSGTAIKGKG 405
>gi|255583707|ref|XP_002532607.1| conserved hypothetical protein [Ricinus communis]
gi|223527663|gb|EEF29773.1| conserved hypothetical protein [Ricinus communis]
Length = 140
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 49 EAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
E + FE + NRV A++ F+ GLK I + + KP L+DAI A++ + +L
Sbjct: 78 ELWARQFEQLGNRVHGWTQKALVGTFMGGLKLEIADAIRFFKPKTLKDAIEYARMKDQQL 137
Query: 109 QS 110
Q
Sbjct: 138 QK 139
>gi|78708031|gb|ABB47006.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1826
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +++ + L+ G + ++ + V E+
Sbjct: 723 VHSIPATILFDSGASHSFISVPFVGRNQLGVQRLRNPLLITTPGGVMIAKYYSPAVPIEI 782
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 783 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 815
>gi|38346260|emb|CAE02082.2| OSJNBa0074B10.10 [Oryza sativa Japonica Group]
Length = 720
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 319 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 378
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +LG+ WL + +I
Sbjct: 379 QGIPFLANLILLESKDLDVILGMDWLARHKGVI 411
>gi|62734517|gb|AAX96626.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550171|gb|ABA92968.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1045
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 16/137 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P N SN P + +TA E Q + +V T P +N P +VL
Sbjct: 228 PVQNNSNAPAPKARVNHVTAAEAQNAPD----------VVLGTFP------VNTIPTTVL 271
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ +G ++ S +C + E++ + F +
Sbjct: 272 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTSGNQVSSTQYCPSITIEIEEIPFPSTL 331
Query: 264 HILDFSRADAVLGVQWL 280
+L+ D +LG+ WL
Sbjct: 332 ILLESKDLDVILGMDWL 348
>gi|77552331|gb|ABA95128.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1309
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 282 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 341
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D VLG+ WL + K + D + T+ T
Sbjct: 342 RRSPFLSNLILLESKDLDVVLGMDWLTR-NKGVIDCASRTITLT 384
>gi|78708468|gb|ABB47443.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1494
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 401 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 460
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +L D +LG+ WL + ++
Sbjct: 461 QGIPFPSDLILLGTKNLDVILGMNWLAQFQGVV 493
>gi|242117542|dbj|BAH80025.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1727
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + + L+ G ++ S +C V E+
Sbjct: 624 VNSIPATVLFDSGATHSFLSKSFATKHGMEVVSLGRPLLVNTPGNQVSSTRYCPSVTIEI 683
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F + +L+ D +LG+ WL + +I
Sbjct: 684 EEVLFPSSLILLESKDLDVILGMDWLSRHRGVI 716
>gi|242117586|dbj|BAH80069.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 1475
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 372 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 432 QGVPFLANLILLKSKDLDVILGMDWLARHKGVI 464
>gi|108707286|gb|ABF95081.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1329
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRAAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D VLG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVVLGMDWLTR-NKGVIDCASRTITLT 501
>gi|357143961|ref|XP_003573116.1| PREDICTED: uncharacterized protein LOC100827899 [Brachypodium
distachyon]
Length = 1665
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 51/112 (45%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L + K + +LID+GS +++ + L ++ + +V V NG ++ +
Sbjct: 620 RLQGVMEGKQVLILIDSGSNGSFISQAAVAAIKLQVQPVPAVVVTVANGGKVSCDSAVPN 679
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
+ QG F + + + D +LG+ WLE GK+ D + F + G
Sbjct: 680 ATWTCQGHTFNSTLRVFNLPHYDMILGMDWLEACGKMWIDWPKKVLRFWHNG 731
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT--NLHPDA--ILDCF 74
L + ++FG + + L + QT SV Y FE + ++V N H D + F
Sbjct: 398 LVVVVHAKFGKDKHHRYLEALERCKQTESVNNYFHKFEELRHKVLVHNRHYDEAFFVTKF 457
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQ 109
++GLK IQ + +HKP + A++LA+ E+ L+
Sbjct: 458 VAGLKREIQKAIRLHKPRTVDAALSLAETQEEMLE 492
>gi|38344008|emb|CAE03176.2| OSJNBa0070O11.7 [Oryza sativa Japonica Group]
Length = 1501
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L+I + + G +R+ +C V E+
Sbjct: 384 VNSYPATVLFDSGASHSFISKRFAGTHGLSIVELKIPMQVHTPGNDMRTAHYCPSVTIEI 443
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 444 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 486
>gi|77556709|gb|ABA99505.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1307
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 345 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSMQRSPSVRIEI 404
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 405 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 437
>gi|242117582|dbj|BAH80065.1| putative retrotransposon protein [Oryza sativa Indica Group]
Length = 821
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q + +V T P +N+ P +V
Sbjct: 134 PAPNNSNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVF 177
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 178 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVFSTQYCPSATIEIEEVLFPSSL 237
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 238 ILLESKDLDVILGMDWLSRHRGVI 261
>gi|38567947|emb|CAE04776.3| OSJNBb0115I21.3 [Oryza sativa Japonica Group]
Length = 1779
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 676 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 735
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L D +LG+ WL + +I
Sbjct: 736 QGVPFLANLILLKSKDLDVILGMDWLARHKGVI 768
>gi|13129460|gb|AAK13118.1|AC080019_10 Polyprotein [Oryza sativa Japonica Group]
Length = 1781
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 688 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 747
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +L D +LG+ WL + ++
Sbjct: 748 QGIPFPSDLILLGTKNLDVILGMNWLAQFQGVV 780
>gi|108862645|gb|ABA98103.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 896
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + + L+ G ++ S +C + E+
Sbjct: 249 VNSIPATVLFDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVSSTQYCPSITIEI 308
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII--TDHK 291
+ + F + +L+ D +LG+ WL + II +HK
Sbjct: 309 EEITFPSTLMLLESKDLDVILGMDWLIRHRGIIDFANHK 347
>gi|38347655|emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group]
Length = 1523
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ + G IR+ C +V +
Sbjct: 616 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVLSPGRNIRATRICPEVNHRI 675
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 676 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDRAEKSITLQ 718
>gi|116309223|emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group]
gi|116309615|emb|CAH66670.1| OSIGBa0110B10.7 [Oryza sativa Indica Group]
Length = 1603
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ + G IR+ C +V +
Sbjct: 616 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVLSPGRNIRATRICPEVNHRI 675
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 676 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDRAEKSITLQ 718
>gi|62733023|gb|AAX95140.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549634|gb|ABA92431.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1313
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 301 VNSYPATVLFDSGASHSFISKRFARTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 360
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 361 KRSPFLSNLVLLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 403
>gi|384486665|gb|EIE78845.1| hypothetical protein RO3G_03550 [Rhizopus delemar RA 99-880]
Length = 1411
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSF------LVAVGNGER--IRSEGH 246
I +P LID+G++ NY+HP+ A++ +F V NGE+ I E
Sbjct: 365 IQGQPYYALIDSGASANYIHPK-------ALKNADAFRSINNQAVETANGEQTMITGEAT 417
Query: 247 CSKVKFEMQGVGFEADFHILDF-SRADAVLGVQWLEKL 283
C+ +K E +G F F F S+ D +LG +WL+++
Sbjct: 418 CT-MKIEGEGKNFIDTFKAFVFESKFDIILGNEWLKRI 454
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 23 IESRFGPS-SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
+E F PS S R L + QTSS+ Y F++I + + D LD F+ GLK
Sbjct: 108 LEYAFKPSYSEQAARDRLANIKQTSSITEYADAFQDILLDLPRVSDDEALDRFVRGLKDK 167
Query: 82 IQNELAIHKPSNLRDAI 98
+ + +P +L +AI
Sbjct: 168 ARIHVLTREPRSLEEAI 184
>gi|77549443|gb|ABA92240.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1319
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 343 PAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 386
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G + S +C E++ V F +
Sbjct: 387 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQAFSTQYCPSATIEIEEVPFPSSL 446
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 447 ILLESKDLDVILGMDWLSRHRGVI 470
>gi|55733883|gb|AAV59390.1| hypothetical protein [Oryza sativa Japonica Group]
gi|57900672|gb|AAW57797.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1253
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK-TMSFLVAVGNGERIRSEGHCSKVKFE 253
+N+ P +L D+G+TH+++ R A ++ K + V G + + +C V E
Sbjct: 282 VNSTPAVILFDSGATHSFISKRFAGAHGFSLVKLKIPMRVHTPRGG-MTTTHYCPSVTVE 340
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 341 IQGLIFPANLILLESKDLDVILGMDWLTRHKGVI-DCASRTIKLT 384
>gi|358347725|ref|XP_003637905.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355503840|gb|AES85043.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 358
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 176 LQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV-- 233
L EE+ D + + + IN+ PL +IDTG+TH+++ L L + + +V
Sbjct: 120 LNAEEVEQPDNLIRGMCF-INSTPLIAIIDTGATHSFISASCVERLDLVVTPLLRGMVID 178
Query: 234 --AVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
A G+ + + C+K V FE D L D + G+ WL G I
Sbjct: 179 TPASGS---VTTSFMCAKCPVNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVSIN--- 232
Query: 292 ALTMEFTY 299
LT T+
Sbjct: 233 CLTRSVTF 240
>gi|50878348|gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFARTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMNWLTR-NKGVIDCASRTITLT 501
>gi|116309152|emb|CAH66252.1| OSIGBa0139I12.1 [Oryza sativa Indica Group]
Length = 1585
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q D V S +N+ P ++L
Sbjct: 558 PAPNNSNVPAPKARVNHVAAAEAQN--------------APDVVLGTFS--VNSIPATML 601
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C E++ V F +
Sbjct: 602 FDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 661
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + II
Sbjct: 662 ILLESKDLDVILGMDWLSRHRGII 685
>gi|27552560|gb|AAO19383.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710558|gb|ABF98353.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1770
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 651 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPCNQALSLQRSPSVRIEI 710
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 711 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 743
>gi|77549283|gb|ABA92080.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1529
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E ++ + S V+ E+
Sbjct: 569 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPMMVSTPSNQALSLQRSPSVRIEI 628
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 629 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 661
>gi|116310275|emb|CAH67280.1| OSIGBa0111L12.7 [Oryza sativa Indica Group]
Length = 940
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSF--LVAVGNGERIRSEGHC 247
+L + + +LID+GSTH++++ ++ L L+ K M V V +G + H
Sbjct: 304 RLRGWVQGIEILMLIDSGSTHSFVYQQIG--LKLSGVKAMPVPARVKVADGGFLTCSLHI 361
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEF 297
+ + QG+ F+++F +L + +L + WLE+ + D +EF
Sbjct: 362 IECDWLTQGIHFKSNFRLLPLGAYNVILEMDWLERFSPMRVDWVHKWLEF 411
>gi|90399274|emb|CAJ86189.1| H0306F03.2 [Oryza sativa Indica Group]
Length = 1135
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 140 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 199
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 200 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 242
>gi|406604001|emb|CCH44516.1| Zinc finger CCHC domain-containing protein [Wickerhamomyces
ciferrii]
Length = 311
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 22 AIESRFGPSSY-INHRATLFKLTQTSSVEAYQSTFENICNRVTNLH--PDAILDCFISGL 78
A ++RF P Y R L +L Q SSV Y S F + ++++ + P +D F+ GL
Sbjct: 125 AFKARFLPVGYETTARERLERLRQLSSVSDYISRFTELASQLSFPYDTPRYQIDRFVEGL 184
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSI 116
K I+ + ++KP L +A LA+ ++D +S K +
Sbjct: 185 KEEIKKLVKVYKPKTLEEAFQLAQSLDDTSKSTRNKLV 222
>gi|54287641|gb|AAV31385.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1493
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ +L D+G+TH+++ R A L++ K + G + + +C V E+
Sbjct: 408 VNSTLAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
QG+ F A+ +L+ D +LG+ WL + +I D + T++ T
Sbjct: 468 QGLIFPANLILLESKDLDVILGMDWLTRHRGVI-DCASRTIKLT 510
>gi|77555389|gb|ABA98185.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1699
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 596 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 655
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL K +I
Sbjct: 656 QGVPFLANLILLESKDLDVILGMDWLAKHKGVI 688
>gi|357436173|ref|XP_003588362.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355477410|gb|AES58613.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 424
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 176 LQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV-- 233
L EE+ D + + + IN+ PL +IDTG+TH+++ L L + + +V
Sbjct: 182 LNAEEVEQPDNLIRGMCF-INSTPLIAIIDTGATHSFISASCVERLDLVVTPLLRGMVID 240
Query: 234 --AVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
A G+ + + C+K V FE D L D + G+ WL G I
Sbjct: 241 TPASGS---VTTSFMCAKCPVNFGDVDFELDLVCLPLKHMDVIFGMDWLLAFGVSIN--- 294
Query: 292 ALTMEFTY 299
LT T+
Sbjct: 295 CLTRSVTF 302
>gi|108862764|gb|ABA98792.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1631
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+ L A + IE L+ + S V+ E+
Sbjct: 649 VNSVPATVLFDSGTTHSILSMSFAGNHGMEIEDLRRPLMISTPSNQALSSQRSPSVRIEI 708
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ + +LG+ WL + +I
Sbjct: 709 QGVPFLANLILLESKYLEVILGMDWLARYKGVI 741
>gi|406601168|emb|CCH47145.1| Zinc finger CCHC domain-containing protein [Wickerhamomyces
ciferrii]
Length = 310
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 22 AIESRFGPSSY-INHRATLFKLTQTSSVEAYQSTFENICNRVTNLH--PDAILDCFISGL 78
A ++RF P Y R L +L Q SSV Y S F + ++++ + P +D F+ GL
Sbjct: 125 AFKARFLPVGYETTARERLERLRQLSSVSDYISRFTELASQLSFPYDTPRYQIDRFVEGL 184
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSI 116
K I+ + ++KP L +A LA+ ++D +S K +
Sbjct: 185 KGEIKKLVKVYKPKTLEEAFQLAQSLDDTSKSARNKLV 222
>gi|77551562|gb|ABA94359.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1505
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 673 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 732
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 733 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 765
>gi|222635821|gb|EEE65953.1| hypothetical protein OsJ_21835 [Oryza sativa Japonica Group]
Length = 347
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD-AILDCFISGLKPTIQ 83
+++GP N L +L+Q+++V YQ F + +RVT+L + + F GL+ I
Sbjct: 223 AQYGPPIRNNPLGELKRLSQSTTVATYQQRFLALSSRVTDLLTERQQVQLFTVGLRDDIC 282
Query: 84 NELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
++ +H+P +L++A+ LA+ E K +++S
Sbjct: 283 IDVELHQPEDLQEAMGLARAYERKANFSPSRTVS 316
>gi|90265159|emb|CAH67785.1| H0201G08.12 [Oryza sativa Indica Group]
Length = 861
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 148 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 207
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 208 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 250
>gi|62733387|gb|AAX95504.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62734599|gb|AAX96708.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550234|gb|ABA93031.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 504
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 329 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 388
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 389 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 421
>gi|78708045|gb|ABB47020.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 989
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 164 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 223
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 224 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 256
>gi|116309775|emb|CAH66816.1| OSIGBa0093K19.3 [Oryza sativa Indica Group]
Length = 575
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 141 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 200
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 201 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 233
>gi|215707240|dbj|BAG93700.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 535
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 193 AKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
+I K + +L+D+GST +++ R+A L + + V V +G + + ++
Sbjct: 406 GQIQGKDVFILVDSGSTASFISARVAEGLSELSQIATNLQVKVADGATLHCQSEIPACEW 465
Query: 253 EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDH--KALTME 296
QG F IL D +LG+ WL + + + K+LT+E
Sbjct: 466 STQGQKFCTTLKILPLGNYDMILGMDWLMQHSPMTVNWVTKSLTIE 511
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 41 KLTQTSSVEAYQSTFENICNRVTNLHPDAILDC-----FISGLKPTIQNELAIHKPSNLR 95
++ QT SV Y F+ + N++ P + C FI GL+ I+N + + +P NL
Sbjct: 184 QIKQTGSVWEYYERFDELMNQLLVYDPGVNM-CYLTHRFIDGLRREIRNAVLLQRPKNLE 242
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPP 146
A+A+A L E+ L+S + + ++ +++T PLP P
Sbjct: 243 SALAVASLQEEVLESSDSTPVK---EGKKFESSGQHKTGGNFKGAFPLPLP 290
>gi|50838904|gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
gi|108709836|gb|ABF97631.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 2784
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 1358 VNSVPATVLYDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSSQALSLQRSPSVRIEI 1417
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 1418 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 1450
>gi|116317882|emb|CAH65910.1| OSIGBa0102O13.1 [Oryza sativa Indica Group]
Length = 1332
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P V
Sbjct: 322 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPAIV 365
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G + S +C V E++ V F +
Sbjct: 366 LFDSGATHSFLSKSFASKHGMEVVSLGRPLLVNTPGNQAFSTRYCPSVTIEIEEVPFPSS 425
Query: 263 FHILDFSRADAVLGVQWL 280
+L+ D +LG+ WL
Sbjct: 426 LILLESKDLDVILGMDWL 443
>gi|50511449|gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854392|gb|AAU10772.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1501
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 384 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMKVHTPGNDMRTAHYCPSVTIEI 443
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 444 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 486
>gi|116309091|emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group]
Length = 1516
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|58533058|emb|CAI44662.1| OSJNBa0061C06.18 [Oryza sativa Japonica Group]
Length = 1522
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 629 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 688
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ + +LG+ WL + +I
Sbjct: 689 QGVPFLANLILLESKDLNVILGMDWLARHKGVI 721
>gi|21741068|emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]
Length = 1516
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|62734186|gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548986|gb|ABA91783.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1760
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + ++A E QT E +V T P +N+ P +VL
Sbjct: 622 PKPRRAGPRFIQARVNHVSAEEAQTAPE----------VVLGTFP------VNSIPATVL 665
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEAD 262
D+G+TH+++ + +H I + +S L+ V G S + E+Q F A+
Sbjct: 666 FDSGATHSFISKKFVG-MHGLIREELSTLMRVHTPGNSSTSVQFSPSITIEIQRSPFLAN 724
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 725 LILLESKDLDVILGMDWLTKFKGVI 749
>gi|32489461|emb|CAE05815.1| OSJNBa0028M15.7 [Oryza sativa Japonica Group]
Length = 1822
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ + ++ + V E+
Sbjct: 719 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPEGVMTAKYYSPAVPIEI 778
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 779 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 811
>gi|38569190|emb|CAE02978.3| OSJNBa0086B14.15 [Oryza sativa Japonica Group]
Length = 1516
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|39545597|emb|CAE02841.3| OSJNBa0014F04.7 [Oryza sativa Japonica Group]
Length = 1625
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ A + +E L+ + S V+ E+
Sbjct: 680 VNSVPATVLFDSGATHSFVSMSFAGNDGMEVEDLRRHLMVSTPSNQALSLQRSPFVRIEI 739
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 740 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 772
>gi|29244670|gb|AAO73263.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108709213|gb|ABF97008.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1652
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E ++ + S V+ E+
Sbjct: 549 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPMMVSTPSNQALSLQRSPSVRIEI 608
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 609 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 641
>gi|38567897|emb|CAE03652.2| OSJNBa0060N03.17 [Oryza sativa Japonica Group]
Length = 1634
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 607 VNSVPATVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 666
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTMEFTYKG 301
QGV F A+ +L+ D +LG+ WL + G I +K +T+ +Y G
Sbjct: 667 QGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANKKVTLT-SYDG 713
>gi|38346256|emb|CAE02078.2| OSJNBa0074B10.6 [Oryza sativa Japonica Group]
Length = 1447
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 16/142 (11%)
Query: 146 PNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLID 205
PN SN P + + A E Q P +L T P +N+ P +VL D
Sbjct: 341 PNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVLFD 384
Query: 206 TGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHI 265
+G+TH++L A + + L+ G ++ S +C E++ V F + +
Sbjct: 385 SGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSLIL 444
Query: 266 LDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 445 LESKDLDVILGMDWLSRHRGVI 466
>gi|357448513|ref|XP_003594532.1| Zinc finger protein GIS2 [Medicago truncatula]
gi|355483580|gb|AES64783.1| Zinc finger protein GIS2 [Medicago truncatula]
Length = 499
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIR---SEGH-- 246
+ INN L +IDTG+TH F+ T+ +++ NGE + ++G
Sbjct: 352 TCYINNTLLVAIIDTGATHC--------FIAFDCASTLGLVMSDMNGEMVVETPAKGSVT 403
Query: 247 ----CSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
C K M G FE D L S D +LG+ WLE
Sbjct: 404 TSLVCLKCPLSMFGRDFEMDLVCLPLSGMDVILGMNWLE 442
>gi|77554740|gb|ABA97536.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1516
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|18657010|gb|AAL78097.1|AC093568_7 Putative polyprotein [Oryza sativa]
gi|31430586|gb|AAP52480.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1473
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|19881623|gb|AAM01024.1|AC090488_24 Putative retroelement [Oryza sativa Japonica Group]
Length = 954
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ K + +L+D+GST +++ ++A L + V V NG + + ++
Sbjct: 418 VQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQVKVANGSILTCLTSVPRCEWMT 477
Query: 255 QGVGFEADFHILDFSRADAVLGVQWL 280
QG F D +L+ D +LG+ WL
Sbjct: 478 QGWVFYTDLKVLNLGSYDMILGMDWL 503
>gi|55168164|gb|AAV44031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733814|gb|AAV59321.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1505
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 388 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTAHYCPSVTIEI 447
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 448 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 490
>gi|62701928|gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548823|gb|ABA91620.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 690 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 749
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 750 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 792
>gi|38346257|emb|CAE02079.2| OSJNBa0074B10.7 [Oryza sativa Japonica Group]
Length = 1287
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%)
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
++L D+G++H+++ L +E+ + L+ G + + + V E+QG+ F
Sbjct: 307 TILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAMYYSPAVPIEIQGIPFP 366
Query: 261 ADFHILDFSRADAVLGVQWLEKLGKII 287
+D +LD D +LG+ WL + ++
Sbjct: 367 SDLILLDTKNLDVILGMNWLAQFQGVV 393
>gi|62734324|gb|AAX96433.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550058|gb|ABA92855.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1636
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E + L+ + S V+ E+
Sbjct: 533 VNSVPTTVLFDSGATHSFLSMSFAGNHGMEVEDLIRPLMVSTPSNQALSLQRSPSVRIEI 592
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 593 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 625
>gi|21671877|gb|AAM74239.1|AC074355_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1065
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+ K + +L+D+GST +++ ++A L + V V NG + + ++
Sbjct: 482 VQGKEVLILVDSGSTASFISSKIAQTLQGVVTLEPPVQVKVANGSILTCLTSVPRCEWMT 541
Query: 255 QGVGFEADFHILDFSRADAVLGVQWL 280
QG F D +L+ D +LG+ WL
Sbjct: 542 QGWVFYTDLKVLNLGSYDMILGMDWL 567
>gi|90265167|emb|CAH67735.1| H0522A01.6 [Oryza sativa Indica Group]
gi|116310748|emb|CAH67543.1| H0425E08.11 [Oryza sativa Indica Group]
Length = 1475
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 372 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPAVRIEI 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 432 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 464
>gi|40786567|gb|AAR89842.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1789
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ + ++ + V E+
Sbjct: 757 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPRGVMTAKYYSPAVPIEI 816
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 817 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 849
>gi|20143556|gb|AAM12313.1|AC091680_14 putative polyprotein [Oryza sativa Japonica Group]
Length = 1453
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ + ++ + V E+
Sbjct: 383 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPRGVMTAKYYSPAVPIEI 442
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 443 QGIPFPSDLILLDTKNLDVILGMNWLAEFQGVV 475
>gi|108711739|gb|ABF99534.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1761
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ + ++ + V E+
Sbjct: 757 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPRGVMTAKYYSPAVPIEI 816
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 817 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 849
>gi|46391139|gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1649
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 624 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 683
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 684 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 726
>gi|38344420|emb|CAE02386.2| OSJNBb0080H08.12 [Oryza sativa Japonica Group]
Length = 1666
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 624 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 683
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 684 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 716
>gi|34015262|gb|AAQ56454.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015280|gb|AAQ56471.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1735
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 632 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRHPLMVSTPSNQALSLQRSPSVRIEI 691
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 692 KGVPFVANLILLESKDLDVILGMDWLARHRGVI 724
>gi|108862640|gb|ABA98065.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1686
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 619 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 678
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 679 EEVDFLAKPIVLDSQSMDIILGMDWLAKHKGQIDCAEKSITLQ 721
>gi|57834025|emb|CAI44621.1| B1168G10.5 [Oryza sativa Japonica Group]
Length = 1456
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G++H++L A + +E L+ + S V+ E+
Sbjct: 610 VNLVPATVLFDSGASHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 669
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 670 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 702
>gi|90265203|emb|CAH67719.1| H0613A10.2 [Oryza sativa Indica Group]
Length = 1809
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|32489661|emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza sativa Japonica Group]
Length = 1851
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVNFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|77552465|gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 468 KEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 510
>gi|218198466|gb|EEC80893.1| hypothetical protein OsI_23536 [Oryza sativa Indica Group]
Length = 288
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD-AILDCFISGLKPTIQ 83
+++GP N L +L+Q+++V YQ F + +RVT+L + + F GL+ I
Sbjct: 164 AQYGPPIRNNPLGELKRLSQSTTVATYQQRFLALSSRVTDLLTERQQVQLFTVGLRDDIC 223
Query: 84 NELAIHKPSNLRDAIALAKLIEDKLQSYNQKSIS 117
++ +H+P +L++A+ LA+ E K +++S
Sbjct: 224 IDVELHQPEDLQEAMGLARAYERKANFSPSRTVS 257
>gi|297724521|ref|NP_001174624.1| Os06g0170800 [Oryza sativa Japonica Group]
gi|215766712|dbj|BAG98940.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676759|dbj|BAH93352.1| Os06g0170800 [Oryza sativa Japonica Group]
Length = 263
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 233 VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
V V NG + K+E+QG F DF +L D +LG+ WLEK + + +A
Sbjct: 61 VKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQA 120
Query: 293 LTMEF 297
T++F
Sbjct: 121 KTIQF 125
>gi|62954893|gb|AAY23262.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77548962|gb|ABA91759.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1416
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 408 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 467
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 468 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 510
>gi|110289020|gb|ABB47439.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1326
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+ +TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSSATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL K +I
Sbjct: 430 QGVPFLANLILLESKDLDVILGMDWLAKHKGVI 462
>gi|108862641|gb|ABG22014.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1422
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN + LID+GST ++ A ++ + V V G +RSE ++++ +
Sbjct: 424 INGRKAVGLIDSGSTSTFMDQEFAIKSQCPLKNSEVKKVVVARGGELRSEVQVPEIQYVI 483
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
QG F F+++ D +LG W+ + I K +E T G
Sbjct: 484 QGEQFSNPFNLIPLKGYDIILGADWIFQYSAITLYLKKRILEITTGG 530
>gi|13129465|gb|AAK13123.1|AC080019_15 Similar to Transposon MAGGYgagandpolgenehomologues [Oryza sativa
Japonica Group]
Length = 2157
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+ +TH++L A + +E L+ + S V+ E+
Sbjct: 834 VNSVPATVLFDSSATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 893
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL K +I
Sbjct: 894 QGVPFLANLILLESKDLDVILGMDWLAKHKGVI 926
>gi|38346588|emb|CAE04652.2| OSJNBa0061G20.8 [Oryza sativa Japonica Group]
Length = 1598
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL ++G+TH++L A + +E L+ + S V+ E+
Sbjct: 495 VNSVPATVLFNSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 554
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 555 QGVPFLANLILLESKDLDVILGMDWLARYKGMI 587
>gi|116309657|emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|90265261|emb|CAD79706.2| H0302E05.9 [Oryza sativa Indica Group]
Length = 1820
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|62734481|gb|AAX96590.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550403|gb|ABA93200.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1640
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G+TH++L A + + L+ G ++ S +C V E+
Sbjct: 691 VNSIPAFVLFDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQVSSTQYCPSVTIEI 750
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ + F + +L+ D +LG+ WL + +I
Sbjct: 751 EEIPFPSSLILLESKDLDVILGMDWLSRHRGVI 783
>gi|32488367|emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group]
gi|32489278|emb|CAE04619.1| OSJNBa0028I23.1 [Oryza sativa Japonica Group]
Length = 1516
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTLGNDMRTAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + K + D + T+ T
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTR-NKGVIDCASRTITLT 501
>gi|15217334|gb|AAK92672.1|AC090714_5 putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 384 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 443
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 444 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 486
>gi|77553813|gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 477 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 536
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 537 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 579
>gi|77556838|gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|19881606|gb|AAM01007.1|AC090488_7 Putative retroelement [Oryza sativa Japonica Group]
Length = 1496
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S ++ E+
Sbjct: 563 VNSVPATVLFDSGATHSFLSMSFAGNHRMEVEDLRRPLMVSTPSNQALSLQRSPSIRIEI 622
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 623 QEVPFLANLTLLESKDLDVILGMDWLARYKGVI 655
>gi|77555610|gb|ABA98406.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1611
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R+ +C V E+
Sbjct: 512 VNSYPATVLFDSGASHSFISKRFAGTHGLSVVELKIPMQVHTPGNDMRTSHYCPSVTIEI 571
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ F ++ +L+ D +LG+ WL + +I
Sbjct: 572 KRSPFLSNLILLESKDLDVILGMDWLTRNKGVI 604
>gi|222618930|gb|EEE55062.1| hypothetical protein OsJ_02776 [Oryza sativa Japonica Group]
Length = 692
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
+ +RFGP + L L +T +VE Y ++F + R L + F +GL +
Sbjct: 293 VHTRFGPPMTDSPLGELTALRRTGTVENYVNSFLALACRDVELSESQQVQLFTAGLVNPL 352
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTR 130
+ ++A+ +P +L DAI LA+ +Y Q++ + PT+ P T R
Sbjct: 353 KTDVALCRPRSLDDAIMLAR-------AYEQRA-TLGPTDPSAPRTGR 392
>gi|18997227|gb|AAL83344.1|AC074282_11 Putative polyprotein [Oryza sativa Japonica Group]
gi|20042905|gb|AAM08733.1|AC116601_26 Putative polyprotein [Oryza sativa Japonica Group]
gi|31429938|gb|AAP51922.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1443
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 340 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRHPLMVSTPSNQALSLQRSPSVRIEI 399
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 400 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 432
>gi|218194487|gb|EEC76914.1| hypothetical protein OsI_15159 [Oryza sativa Indica Group]
Length = 225
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQNELAIHKPSNLRDA 97
L +LTQTS+V AYQ F + +R+ + L + FI+GL+ I ++ + KP +L+DA
Sbjct: 97 LKRLTQTSTVVAYQECFLALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPDDLQDA 156
Query: 98 IALAKLIEDKL 108
+ L + E K+
Sbjct: 157 MRLPRAYEWKV 167
>gi|31432239|gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1829
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|116309635|emb|CAH66687.1| OSIGBa0097A15.2 [Oryza sativa Indica Group]
Length = 1560
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL ++G+TH++L A + +E L+ + S V+ E+
Sbjct: 495 VNSVPATVLFNSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 554
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 555 QGVPFLANLILLESKDLDVILGMDWLARYKGMI 587
>gi|22655778|gb|AAN04195.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1523
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S ++ E+
Sbjct: 592 VNSVPATVLFDSGATHSFLSMSFAGNHRMEVEDLRRPLMVSTPSNQALSLQRSPSIRIEI 651
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 652 QEVPFLANLTLLESKDLDVILGMDWLARYKGVI 684
>gi|302815659|ref|XP_002989510.1| hypothetical protein SELMODRAFT_447725 [Selaginella moellendorffii]
gi|300142688|gb|EFJ09386.1| hypothetical protein SELMODRAFT_447725 [Selaginella moellendorffii]
Length = 329
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 33/210 (15%)
Query: 71 LDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTR 130
L+ +ISGL P + N + + KP NL++AI LA E ++ + P P T R
Sbjct: 112 LNRYISGLNPPLANFVNVRKPRNLQEAITLALQAERAAKAAAEAKPKESP-----PLTAR 166
Query: 131 N-ETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPK 189
++ + L P PP P K+ + +D K
Sbjct: 167 YYQSFVALPPKEEQPPSAPKKDVKLHFVV----------------------YYGDDDFGK 204
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS- 248
L ++N +S + + S+ N++ L L E+ F V G + +
Sbjct: 205 WLRGRVNGHTVS-FVASNSSDNFVSESTVSRLGLRTEECTEFSVETPLGTSTYTGNLVAP 263
Query: 249 KVKFEMQGVGFEA--DFHILDFSRADAVLG 276
K++FE+ G G+ DF ++ FSR D VLG
Sbjct: 264 KLEFEIDG-GYMGRMDFAVMKFSRHDFVLG 292
>gi|31712084|gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 44 QTSSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIA 99
QT SV Y FE+ + V HP IL CFI GL+ I++++ KP NL
Sbjct: 387 QTGSVMQYIDKFEDCVSLVKRDHPYLTESYILSCFIGGLRADIKHDVCGQKPQNLLAGYW 446
Query: 100 LAKLIE 105
AK+ E
Sbjct: 447 YAKVYE 452
>gi|116309548|emb|CAH66611.1| H0211A12.14 [Oryza sativa Indica Group]
Length = 486
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTI 82
+E RFGP N TL +L + SV YQ F ++ +R L ++ F +GL+ +
Sbjct: 115 VELRFGPPLRHNKLGTLAELRRAGSVADYQEKFMSLLSRAGPLMEVQKIELFTAGLQGKL 174
Query: 83 QNELAIHKPSNLRDAIALAKLIEDKLQ 109
+ ++ + P+ L A++LA+ E ++Q
Sbjct: 175 RIDVELEAPALLDTAMSLARAYELRVQ 201
>gi|108864659|gb|ABA95357.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2811
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 233 VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
V V NG + K+E+QG F DF +L D +LG+ WLEK + + +A
Sbjct: 1854 VKVANGAVLSCTSELPAAKWEVQGHQFSTDFKLLPLDNYDMILGMDWLEKYSPMDINWQA 1913
Query: 293 LTMEF 297
T++F
Sbjct: 1914 KTIQF 1918
>gi|38343985|emb|CAD40451.2| OSJNBa0041M21.9 [Oryza sativa Japonica Group]
gi|38343993|emb|CAD40358.2| OSJNBa0093P23.4 [Oryza sativa Japonica Group]
Length = 1543
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 444 VNSVPATVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 503
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +LG+ WL + +I
Sbjct: 504 QGIPFLANLILLESKDLDVILGMDWLARHKGVI 536
>gi|58532040|emb|CAE05093.3| OSJNBa0009K15.13 [Oryza sativa Japonica Group]
Length = 1480
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 532 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDIRRPLLVSTPSNQALSLQRSPSVRIEI 591
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK 282
QGV F A+ +L+ D +LG+ WL +
Sbjct: 592 QGVPFLANLILLESKDLDVILGMDWLAR 619
>gi|108710432|gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 44 QTSSVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIA 99
QT SV Y FE+ + V HP IL CFI GL+ I++++ KP NL
Sbjct: 301 QTGSVMQYIDKFEDCVSLVKRDHPYLTESYILSCFIGGLRADIKHDVCGQKPQNLLAGYW 360
Query: 100 LAKLIE 105
AK+ E
Sbjct: 361 YAKVYE 366
>gi|38345510|emb|CAE01794.2| OSJNBa0039K24.13 [Oryza sativa Japonica Group]
Length = 1851
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 858
>gi|297735014|emb|CBI17376.3| unnamed protein product [Vitis vinifera]
Length = 1567
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 177 QEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL-VAV 235
+E+ +LVE + + + + VL DTG+TH+++ A+ L L E+ + L +
Sbjct: 412 EEDALLVEGMI------LVYSTWVRVLFDTGATHSFISASCANALGLKSERVENLLLIES 465
Query: 236 GNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
G R + C + D ILD + D +LG+ WL +I H+
Sbjct: 466 PMGTNSRVDRICKGCVITLADRALNVDLRILDMTGYDVILGMDWLAVYRAVIDCHR 521
>gi|110288673|gb|ABG65937.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1251
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S ++ E+
Sbjct: 320 VNSVPATVLFDSGATHSFLSMSFAGNHRMEVEDLRRPLMVSTPSNQALSLQRSPSIRIEI 379
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 380 QEVPFLANLTLLESKDLDVILGMDWLARYKGVI 412
>gi|21741612|emb|CAD40943.1| OSJNBa0027G07.15 [Oryza sativa Japonica Group]
Length = 999
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 141 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPNNQALSLQRSPSVRIEI 200
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 201 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 233
>gi|116309169|emb|CAH66267.1| OSIGBa0136B09.3 [Oryza sativa Indica Group]
Length = 1469
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +LG+ WL + +I
Sbjct: 430 QGIPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|108707255|gb|ABF95050.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1790
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+ ++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 687 VHSIPATILFDSRASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 746
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 747 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 779
>gi|110289096|gb|ABG66083.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1093
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 78 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 137
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 138 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 180
>gi|110289465|gb|ABG66211.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1666
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ + ++ + V E+
Sbjct: 578 IHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPRGVMTAKYYSPAVPIEI 637
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 638 QGIPFPSDLILLDTKNLDVILGMNWLAEFQGVV 670
>gi|13699784|gb|AAK38383.1|AC079028_7 hypothetical protein [Arabidopsis thaliana]
Length = 712
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 202 VLIDTGSTHNYLHPRLAHFLHLAIEKTMS-FLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
VL D+G+TH+++ PR+ E M +V G+ + EG + ++G+
Sbjct: 278 VLFDSGATHSFVSPRMIGKGKFQKEPRMDPTVVNAAGGQAMIPEGQVCGIPVSIKGIEMP 337
Query: 261 ADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
D I+ + + +LG+ WL K + H+
Sbjct: 338 VDLIIIPLEKHEVILGMDWLGKYKATLNCHRG 369
>gi|23266289|gb|AAN16328.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430803|gb|AAP52669.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1263
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 610 VNLVPATVLFDSGATHSFLSMSFGGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 669
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 670 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 702
>gi|54291835|gb|AAV32203.1| unknown protein [Oryza sativa Japonica Group]
Length = 434
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ +I + +L+D+GS+ ++L+ +A L K V V NG + +
Sbjct: 1 MVGQIQGLEILILVDSGSSVSFLNSTIADNLKNVQRKPQQISVQVANGNILHCTSAITNC 60
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
++ QG F +L + D +LG+ WL T+H +T+ + K
Sbjct: 61 QWSTQGYVFNTTLRVLSLNSYDLILGMDWL-------TEHSPMTVNWATK 103
>gi|50838937|gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Oryza sativa Japonica
Group]
Length = 1633
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 207 VNSVPATVLYDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSSQALSLQRSPSVRIEI 266
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 267 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 299
>gi|77554505|gb|ABA97301.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1447
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 369 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 428
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 429 KGVPFLANLILLEPKDLDVILGMDWLARHKGVI 461
>gi|224152695|ref|XP_002337260.1| predicted protein [Populus trichocarpa]
gi|222838644|gb|EEE77009.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 15 EQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP----DAI 70
E ++AI SRFG I KLTQ +E Y FE + + + +L+P
Sbjct: 165 EWEEFSKAICSRFGSRDDIVEEFN--KLTQEGGMEEYVERFEELKSLMHSLNPLLPESYY 222
Query: 71 LDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIED 106
+ FISGLK I+ L I KP L A AK E+
Sbjct: 223 ISSFISGLKEDIKPMLKILKPGTLMTAFDQAKWQEE 258
>gi|116308877|emb|CAH66012.1| OSIGBa0093M15.2 [Oryza sativa Indica Group]
Length = 1352
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 327 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRHPLMVSTPSNQALSLQRSPSVRIEI 386
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 387 KGVPFLANLILLESKDIDVILGMDWLARYKGVI 419
>gi|125570510|gb|EAZ12025.1| hypothetical protein OsJ_01904 [Oryza sativa Japonica Group]
Length = 272
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQ 83
++FGP N L +LTQT++V AYQ F + +R L + + +GL+ +
Sbjct: 160 AQFGPPIRHNPLGELKRLTQTTTVAAYQCRFLALASRTAELLTENQQVQLLTAGLREDLA 219
Query: 84 NELAIHKPSNLRDAIALAKLIEDK 107
++ I++P +L++A++LA+ E K
Sbjct: 220 IDVEINRPDDLQEAMSLARAFERK 243
>gi|37991871|gb|AAR06317.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1233
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+ +TH+++ R A L++ K + G + + +C V E+
Sbjct: 389 VNSTPATILFDSSATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 448
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +L + WL + +I
Sbjct: 449 QGLIFPANLILLESKDLDVILRMDWLTRHRGVI 481
>gi|62734491|gb|AAX96600.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1530
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 471 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 530
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 531 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 563
>gi|54633397|gb|AAV35799.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|108709586|gb|ABF97381.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1238
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+ +TH+++ R A L++ K + G + + +C V E+
Sbjct: 389 VNSTPATILFDSSATHSFISKRFAGAHGLSLVKLKIPMRVHTPGGGMTTTHYCPSVTVEI 448
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +L + WL + +I
Sbjct: 449 QGLIFPANLILLESKDLDVILRMDWLTRHRGVI 481
>gi|62733803|gb|AAX95912.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549676|gb|ABA92473.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1337
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 430 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 462
>gi|108862469|gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 712 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 771
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 772 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIECAEKSITLQ 814
>gi|147861322|emb|CAN83996.1| hypothetical protein VITISV_031193 [Vitis vinifera]
Length = 499
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
++SAK+ L VLID+GSTHN+++ R+A L L + F V V NG+ ++ +
Sbjct: 75 RVSAKVGPHELIVLIDSGSTHNFINERIAELLQLPMVPIEPFNVKVANGDPLKCQ 129
>gi|77551437|gb|ABA94234.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1214
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V
Sbjct: 140 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRT 199
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 200 EEVDFLAKPIVLDSQNLDIILGMDWLAKHKGQIDCAEKSITLQ 242
>gi|38347263|emb|CAE05310.2| OSJNBa0056L23.8 [Oryza sativa Japonica Group]
Length = 1472
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P +VL D+G+TH++L A + +E + + S V+ E+
Sbjct: 369 INSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRCPWMVSTPSNQALSLQRSPSVRIEI 428
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 429 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 461
>gi|77554807|gb|ABA97603.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1753
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 50/93 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L ++G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 650 IHSIPATILFNSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 709
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD + +LG+ WL + ++
Sbjct: 710 QGIPFPSDLILLDTKNLNVILGMNWLAQFQGVV 742
>gi|38344096|emb|CAE01756.2| OSJNBb0056F09.19 [Oryza sativa Japonica Group]
Length = 234
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 34 NHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQNELAIHKPS 92
N L +LTQTS+V AYQ F + +R+ + L + FI+GL+ I ++ + KP
Sbjct: 101 NPFGELKRLTQTSTVVAYQECFLALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPD 160
Query: 93 NLRDAIALAKLIEDK 107
+L+DA+ L + E K
Sbjct: 161 DLQDAMRLPRAYEWK 175
>gi|116310101|emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 782 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 841
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K +T++
Sbjct: 842 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKTITLQ 884
>gi|54291803|gb|AAV32172.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1820
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V ++
Sbjct: 717 VHSIPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIDI 776
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ +D +LD D +LG+ WL + ++
Sbjct: 777 QGIPLPSDLILLDTKNLDVILGMNWLAQFQGVV 809
>gi|62733279|gb|AAX95396.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative
[Oryza sativa Japonica Group]
gi|77550170|gb|ABA92967.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1569
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 510 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 569
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 570 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 602
>gi|108864168|gb|ABA92247.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1378
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E
Sbjct: 601 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEN 660
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 661 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 693
>gi|242797624|ref|XP_002482998.1| hypothetical protein TSTA_008890 [Talaromyces stipitatus ATCC
10500]
gi|218716343|gb|EED15764.1| hypothetical protein TSTA_008890 [Talaromyces stipitatus ATCC
10500]
Length = 207
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 194 KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFE 253
KI K + +L+D+G+T NY+ + H + I+ T + VG ++G+ K
Sbjct: 53 KIQGKDIRILLDSGATGNYISQKFIHLNKIPIKTTDEWTKIVGIDRETITKGYKKKTSGI 112
Query: 254 MQGVGFEA-----DFHILDFSRADAVLGVQWLEKLGKII 287
+ G A D +D DAVLG+ WL++ II
Sbjct: 113 LMRSGKYATTITFDIAPMDTQYYDAVLGMAWLKEQNLII 151
>gi|222628514|gb|EEE60646.1| hypothetical protein OsJ_14090 [Oryza sativa Japonica Group]
Length = 225
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQNELAIHKPSNLRDA 97
L +LTQTS+V AYQ F + +R+ + L + FI+GL+ I ++ + KP +L+DA
Sbjct: 97 LKRLTQTSTVVAYQECFLALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPDDLQDA 156
Query: 98 IALAKLIEDK 107
+ L + E K
Sbjct: 157 MRLPRAYEWK 166
>gi|147839856|emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 150 NPPKIALPICRLTAVEMQT---RQEPSEIL-------QEEEILVEDTVPKQLSAKINNKP 199
PP+ LP ++ + T RQ + +E+ +LV+ + + +
Sbjct: 315 QPPQFQLPYYQMPQLPPTTGRGRQAAGRVFALTPTESEEDALLVKGMI------LVYSTW 368
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL-VAVGNGERIRSEGHCSKVKFEMQGVG 258
+ VL DTG+TH+++ A+ L L E+ + L + G R + C +
Sbjct: 369 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLANRA 428
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
D ILD + D +LG+ WL +I H+
Sbjct: 429 LNVDLRILDMTGYDVILGMDWLAVYRAVIDCHR 461
>gi|77551464|gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1369
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ +I K + +L+D+GST +++ +LA L V V +G + +
Sbjct: 366 RMLGQIQGKEILILVDSGSTASFISKKLAAGLVGVQGLPTKVQVKVADGAVLHCQSVIQN 425
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
++ QG F DF +L D +LG+ WL + + D T+
Sbjct: 426 CEWVSQGHMFCTDFKVLALGNYDVILGMDWLMQHSPMTVDWSTRTL 471
>gi|77552426|gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1874
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 972 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 1031
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK 282
+GV F A+ +L+ D +LG+ WL +
Sbjct: 1032 KGVPFLANLILLESKDLDVILGMDWLAR 1059
>gi|34015342|gb|AAQ56531.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1289
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRHPLMVSTPRNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 KGVPFLANLILLESKDLDVILGMDWLARHRGVI 462
>gi|52353549|gb|AAU44115.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1717
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 16/137 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN SN P + + A E Q P +L T P +N+ P +VL
Sbjct: 603 PAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATVL 646
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L + + L+ G ++ S +C E++ V F +
Sbjct: 647 FDSGATHSFLSKSFTSNHGMEVISLERPLLVNTPGNQVFSTQYCPSATIEIEEVPFPSSL 706
Query: 264 HILDFSRADAVLGVQWL 280
+L+ D +LG+ WL
Sbjct: 707 ILLESKDLDVILGMDWL 723
>gi|110289632|gb|ABG66286.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1759
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 664 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHFPGRNIRATQICPEVNLRI 723
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 724 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 766
>gi|19225021|gb|AAL86497.1|AC099040_1 putative polyprotein [Oryza sativa Japonica Group]
Length = 1722
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G TH++L A + +E L+ + S V+ E+
Sbjct: 619 VNSVPTTVLFDSGVTHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 678
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 679 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 711
>gi|110288811|gb|AAP52698.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1713
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G TH++L A + +E L+ + S V+ E+
Sbjct: 610 VNSVPTTVLFDSGVTHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 669
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 670 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 702
>gi|302762422|ref|XP_002964633.1| hypothetical protein SELMODRAFT_438917 [Selaginella moellendorffii]
gi|300168362|gb|EFJ34966.1| hypothetical protein SELMODRAFT_438917 [Selaginella moellendorffii]
Length = 326
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 30/209 (14%)
Query: 71 LDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTR 130
L+ +ISGL P + N + + KP NL++AI LA E ++ + P P T R
Sbjct: 108 LNRYISGLNPPLANFVNLRKPRNLQEAITLALQAERAAKAAAEAKPKETP-----PLTAR 162
Query: 131 NETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQ 190
+ LPP PP +L V +D K
Sbjct: 163 -----YYQSFVALPPKKEEQPPSAPKKDVKLHFVVYSG---------------DDDFGKW 202
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS-K 249
++N +S + + S+ N++ L L E+ F V G + + K
Sbjct: 203 QRGRVNGHTVS-FVASNSSDNFVSESAVSRLGLRTEECTEFSVETPLGTSTYTGNLVAPK 261
Query: 250 VKFEMQGVGFEA--DFHILDFSRADAVLG 276
++FE+ G G+ DF ++ FSR D VLG
Sbjct: 262 LEFEIDG-GYMGRMDFAVMKFSRHDFVLG 289
>gi|15217260|gb|AAK92604.1|AC078944_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 1571
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 648 VNLVPATVLFDSGATHSFLSMSFAGNHGMKVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 707
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 708 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 740
>gi|87162498|gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
CCHC-type; Peptidase aspartic, active site;
Retrotransposon gag protein [Medicago truncatula]
Length = 912
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCSKV 250
+ I+N PL +IDTG+TH ++ L L + + +V + + C K
Sbjct: 329 TCYISNTPLVAIIDTGATHCFIAFDCVSALGLDLSDMNGEMVVETPAKGSVTTSLVCLKC 388
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G FE D L S D +LG+ WLE
Sbjct: 389 PLSMFGRDFEMDLVCLPLSGMDVILGMNWLE 419
>gi|38605881|emb|CAD40007.3| OSJNBb0052B05.10 [Oryza sativa Japonica Group]
Length = 1963
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 978 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 1037
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 1038 QEVPFLANLILLESKDLDVILGMDWLARHKGVI 1070
>gi|38344464|emb|CAE04935.2| OSJNBa0017P10.12 [Oryza sativa Japonica Group]
gi|38567639|emb|CAE75877.1| B1234D02.1 [Oryza sativa Japonica Group]
Length = 1742
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 639 VNSVPAIVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 698
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 699 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 731
>gi|116308939|emb|CAH66066.1| OSIGBa0092O07.1 [Oryza sativa Indica Group]
gi|116309115|emb|CAH66220.1| OSIGBa0157N01.6 [Oryza sativa Indica Group]
Length = 1445
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R A L++ + + G +R +C V E+
Sbjct: 399 VNSYPATVLFDSGASHSFISKRFAGAHGLSVVELKIPMQVHTPGNDMRIAHYCPSVTIEI 458
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ F ++ +L+ D +LG+ WL + +I
Sbjct: 459 KRSPFLSNLILLESKDLDVILGMDWLTRHKGVI 491
>gi|32489382|emb|CAE04228.1| OSJNBa0011F23.1 [Oryza sativa Japonica Group]
Length = 1787
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 756 VNSIPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQVCPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K +T++
Sbjct: 816 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKTITLQ 858
>gi|147807472|emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL-VAVGNGERIRSEGHCSKVKFEMQGVG 258
+ VL DTG+TH+++ A+ L L E+ + L + G R + C +
Sbjct: 530 VRVLFDTGATHSFISASCANALGLKSERVENLLLIESPMGTNSRVDRICKGCVITLADRA 589
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
D ILD + D +LG+ WL +I H+
Sbjct: 590 LNVDLRILDMTGYDVILGMDWLAVYRAVIDCHR 622
>gi|226407|prf||1510387A retrotransposon del1-46
Length = 1443
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 120/329 (36%), Gaps = 66/329 (20%)
Query: 26 RFGPSSYINHRATLFKLTQTS-SVEAYQSTFENICNRVTNLHPDA---ILDCFISGLKPT 81
+F P + + L Q S +V Y++ FE + +R D + F GLK +
Sbjct: 140 KFFPDTVRDDLERFMTLVQGSLTVAQYEAKFEEL-SRYAPYQVDINIRKVKRFEQGLKLS 198
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQSYNQ----KSISWKPTNTPI----PTTTRNET 133
I +L+ H + R+ I A +E + Q Q +S + N P P N+
Sbjct: 199 ITKQLSSHLIKDYREVITRALSVEKREQREAQIMAKRSKKNRGHNHPYTRKEPHRQSNDK 258
Query: 134 NIRLNPLLP--------------------LPPPNPSNPPKIALPIC-----------RLT 162
+ NPL P + PP PP R+T
Sbjct: 259 SQCPNPLSPGKVCYSYGQPGHFKSNYLTLMAPPQQHPPPYRPPQNQPRPPQHQGEGPRVT 318
Query: 163 AVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLH 222
V Q+P V T+ + + + I + VLIDTGSTH+++ PR+ L
Sbjct: 319 RVNALIAQDPG---------VSGTMIRSILS-IFSSLCHVLIDTGSTHSFITPRIIKMLE 368
Query: 223 LAIE---KTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQW 279
+ ++ +S + +G + C + D ILD D +LG+ W
Sbjct: 369 IPVQPLGYILSVISPIGTSTFVNQV--CKGCMITIGNQELTVDLIILDLEDPDILLGMDW 426
Query: 280 -------LEKLGKIITDHKALTMEFTYKG 301
L+ K +T H EF + G
Sbjct: 427 LAAYHVVLDCFSKKVTFHLPGIPEFHFHG 455
>gi|77555355|gb|ABA98151.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1281
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P S+L D+G+TH++L A + + L+ G ++ S +C E+
Sbjct: 378 VNSIPASMLFDSGATHSFLSKSFASNHGMEVISLGRPLLVNPPGNQVSSTQYCPSATIEI 437
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F + +L+ D +LG+ WL + +I
Sbjct: 438 EKVPFPSSLILLESKDLDIILGMDWLSRHRGVI 470
>gi|38344560|emb|CAD39902.2| OSJNBa0065B15.6 [Oryza sativa Japonica Group]
Length = 1467
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+ L A + +E LV + S V+ E+
Sbjct: 532 VNSVPATVLFDSGATHSLLSMSFAGNHGMEVEDLRRPLVVSTPSNQALSLQRSPSVRIEI 591
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 592 QEVPFLANLILLESKDPDVILGMDWLARYKGVI 624
>gi|77552000|gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 755 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRAIQICPEVNLRI 814
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 815 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 857
>gi|357450709|ref|XP_003595631.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355484679|gb|AES65882.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 338
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCSKV 250
+ INN PL +IDT +TH L L + + +V + + CS+
Sbjct: 101 TCYINNTPLVAIIDTSATHCIFAFHCVSALGLDVSDMNGEMVVDTPAKGSVTTSLVCSRC 160
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G F D L S D +LG+ WLE
Sbjct: 161 PLSMDGRDFVMDLVCLPLSGMDVILGMNWLE 191
>gi|78707944|gb|ABB46919.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1778
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN N P + + A E Q + +V T P +N+ P +VL
Sbjct: 640 PAPNNFNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVL 683
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G + S +C V E++ V F +
Sbjct: 684 FDSGATHSFLSKSFAIKHGMEVVSLGRPLLVNTPGNQAFSTRYCPSVTIEIEEVPFPSSL 743
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 744 ILLESKDLDVILGMDWLSRHRGVI 767
>gi|108706119|gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D G++H+++ + ++ G IR+ C +V +
Sbjct: 681 VNSVPAIVLFDLGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICPEVNLRI 740
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 741 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 783
>gi|54287534|gb|AAV31278.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1727
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 549 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRHPLMVSTPSNQALSLQRSPSVRIEI 608
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 609 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 641
>gi|77555011|gb|ABA97807.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1188
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 333 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 392
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 393 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 425
>gi|110288892|gb|ABG66013.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1683
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P ++L D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 605 VNLVPATMLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 664
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 665 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 697
>gi|16905211|gb|AAL31081.1|AC091749_10 putative polyprotein [Oryza sativa Japonica Group]
gi|22655733|gb|AAN04150.1| Putative polyprotein [Oryza sativa Japonica Group]
Length = 1416
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P ++L D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 338 VNLVPATMLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 397
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 398 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 430
>gi|77555297|gb|ABA98093.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1424
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH+++ A + +E L+ + S V+ E+
Sbjct: 367 VNLVPATVLFDSGATHSFISMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 426
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 427 KGVSFLANLILLESKDLDVILGMDWLARHKGVI 459
>gi|147795669|emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 178 EEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL-VAVG 236
E+ +LVE + + + + VL DTG+TH+++ A+ L L E+ + L +
Sbjct: 429 EDALLVEGMI------LVYSTWVRVLFDTGATHSFISASCANALGLKSERVENLLLIESP 482
Query: 237 NGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
G R + C + D ILD + D +LG+ WL +I H+
Sbjct: 483 MGTNSRVDRICKGCVITLADRALNVDLRILDMTGYDVILGMDWLAVYRAVIDCHR 537
>gi|34015184|gb|AAQ56379.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1689
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G +H+++ L +E+ + L+ + ++ + V E+
Sbjct: 626 IHSIPATILFDSGPSHSFISMPFVGRNQLGVERLRNPLLITTPRGVMTAKYYSPAVPIEI 685
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +LD D +LG+ WL + ++
Sbjct: 686 QGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 718
>gi|38347555|emb|CAD39386.2| OSJNBb0016B03.11 [Oryza sativa Japonica Group]
Length = 1374
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L L H + +E L+ + S V+ E+
Sbjct: 372 VNSVPATVLFDSGATHSFL---LNH--GMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 426
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 427 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 459
>gi|110288660|gb|ABB46832.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1662
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 640 VNLVPATVLFDSGATHSFLSMSFAGNHGMKVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 699
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 700 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 732
>gi|115457498|ref|NP_001052349.1| Os04g0273100 [Oryza sativa Japonica Group]
gi|113563920|dbj|BAF14263.1| Os04g0273100, partial [Oryza sativa Japonica Group]
Length = 211
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 34 NHRATLFKLTQTSSVEAYQSTFENICNRVTN-LHPDAILDCFISGLKPTIQNELAIHKPS 92
N L +LTQTS+V AYQ F + +R+ + L + FI+GL+ I ++ + KP
Sbjct: 78 NPFGELKRLTQTSTVVAYQECFLALTSRIPDPLTESQQVQLFIAGLQDDISIDVELQKPD 137
Query: 93 NLRDAIALAKLIEDK 107
+L+DA+ L + E K
Sbjct: 138 DLQDAMRLPRAYEWK 152
>gi|34015248|gb|AAQ56440.1| putative polyprotein [Oryza sativa Japonica Group]
gi|34015300|gb|AAQ56491.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1222
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 49/93 (52%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++H+++ R+A L++ + + G + + +C V E+
Sbjct: 215 VNSFPATVLFDSGASHSFISKRIAGTHGLSVVELKILMRVHTPGNDMNTTHYCPSVTIEI 274
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ F ++ +L+ D +LG+ WL + +I
Sbjct: 275 KRSPFLSNLILLESKDLDVILGMDWLTRHKGVI 307
>gi|62734515|gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550173|gb|ABA92970.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1509
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 183 VEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIR 242
V D V S +N+ P VL D+G++H+++ + ++ G IR
Sbjct: 507 VPDVVMGMFS--VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLHVPMIVHSPGRNIR 564
Query: 243 SEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ C +V ++ V F A +LD D +LG+ WL K G+I +++T++
Sbjct: 565 ATQICPEVNLRIEEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAERSITLQ 619
>gi|108862586|gb|ABG22001.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1751
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 648 VNSVHATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 707
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F A+ +L+ D +LG+ WL + +I
Sbjct: 708 QGIPFLANLILLESKDLDVILGMDWLARYKGVI 740
>gi|18092337|gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
Length = 1470
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P SVL D+G++H+++ ++ L G +++ C V ++
Sbjct: 370 VNSIPASVLFDSGASHSFITASFVEKHNIPKYPLKRILHISSPGGDMKATHSCPHVNIKI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F D +L + D +LG WL+ +I
Sbjct: 430 QGIDFTVDPVVLGSNGIDVILGCNWLKSCDGVI 462
>gi|449443978|ref|XP_004139752.1| PREDICTED: uncharacterized protein LOC101213746 [Cucumis sativus]
Length = 431
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 24/112 (21%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L KI + + ++ID+G+TH+++ L L + +T ++ V +G+G ++ +G S
Sbjct: 49 KLKGKIKERKVVIIIDSGATHSFIAKNFVTTLSLPMTETSNYGVILGSGVAVKGKGIRSN 108
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
V E+ G WL KLG D K L M F + G
Sbjct: 109 V--EVTG----------------------WLHKLGMTEFDMKNLVMTFRHGG 136
>gi|22711558|gb|AAM01161.2|AC113336_13 Putative retroelement [Oryza sativa Japonica Group]
gi|78707943|gb|ABB46918.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1661
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P PN N P + + A E Q + +V T P +N+ P +VL
Sbjct: 655 PAPNNFNVPAPKARVNHVAAAEAQNAPD----------VVLGTFP------VNSIPATVL 698
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G + S +C V E++ V F +
Sbjct: 699 FDSGATHSFLCKSFAIKHGMEVVSLGRPLLVNTPGNQAFSTRYCPSVTIEIEEVPFPSSL 758
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 759 ILLESKDLDVILGMDWLSRHRGVI 782
>gi|147798060|emb|CAN62942.1| hypothetical protein VITISV_034196 [Vitis vinifera]
Length = 945
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEGHCSKVKFEMQGVG 258
+ VL DTG+TH+++ A+ L L +E + L+ G R + C +
Sbjct: 167 VRVLFDTGATHSFISASCANTLGLKMEMVENLLLIXSPMGTNSRXDRICKGCVITLXNRA 226
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
+ D ILD D +LG+ WL +I H+
Sbjct: 227 LKVDLRILDMIGYDVILGMDWLTVYRALIDCHR 259
>gi|110289018|gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1755
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 603 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 646
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q + F A+
Sbjct: 647 FDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRLPFLANL 706
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 707 ILLESKDLDVILGMDWLTKFNGVI 730
>gi|77552225|gb|ABA95022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1473
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 370 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 429
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 430 KGVPFLANLILLESKDLDVILGMDWLARHKGVI 462
>gi|38347459|emb|CAD40090.2| OSJNBb0012A12.12 [Oryza sativa Japonica Group]
Length = 1581
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 478 VNSVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 537
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 538 QEVPFLANLILLESKDLDVILGMDWLARHKGVI 570
>gi|38345968|emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V ++
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G++ K++T++
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQLDCAEKSITLQ 854
>gi|77551972|gb|ABA94769.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1747
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V +
Sbjct: 673 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQICLEVNLRI 732
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I +++T++
Sbjct: 733 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAERSITLQ 775
>gi|116311106|emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ C +V ++
Sbjct: 752 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSLGRNIRATQICPEVNLKI 811
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G++ K++T++
Sbjct: 812 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQLDCAEKSITLQ 854
>gi|77553944|gb|ABA96740.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1234
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 295 VNLVPAAVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 354
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+GV F A+ +L+ D +LG+ WL + +I
Sbjct: 355 KGVLFLANLILLESKDLDVILGMDWLARHKGVI 387
>gi|18652528|gb|AAL77161.1|AC091732_12 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1731
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 579 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 622
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q + F A+
Sbjct: 623 FDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRLPFLANL 682
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 683 ILLESKDLDVILGMDWLTKFNGVI 706
>gi|242095932|ref|XP_002438456.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
gi|241916679|gb|EER89823.1| hypothetical protein SORBIDRAFT_10g020014 [Sorghum bicolor]
Length = 1414
Score = 43.9 bits (102), Expect = 0.079, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 23 IESRFGPSSYINHRATLFKLTQ---TSSVEAYQSTFENICNRVTNLHPDAILDCFISGLK 79
++ RFGP A LF+L + T +VE Y + F+ + R L + + GL
Sbjct: 122 LDLRFGPPL---RSAPLFELAECRRTGTVEEYSNRFQALLPRAGRLEESQRVQLYTGGLL 178
Query: 80 PTIQNELAIHKPSNLRDAIALAKLIE 105
P + + + IH P L A++LA+ IE
Sbjct: 179 PPLSHAVRIHNPETLPAAMSLARQIE 204
>gi|147853302|emb|CAN78544.1| hypothetical protein VITISV_028082 [Vitis vinifera]
Length = 594
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 115/313 (36%), Gaps = 55/313 (17%)
Query: 18 ALTRAIESRFGPS--SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFI 75
A R I+ +F P +YI R +L +L T S+ Y F + + N+ + +L F+
Sbjct: 204 AFKREIKRQFYPEDVAYIA-RKSLKRLKHTGSIREYVKEFSTLMLEIPNMAEEELLFNFM 262
Query: 76 SGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPT-------------- 121
L+ + EL +L +A + + L Y + S KP
Sbjct: 263 DNLQSWAEQELRRRGVQDLATTMA----VAESLVDYKRGDSS-KPKPPSKGNQAKGGGDK 317
Query: 122 ----NTPIPTTTRN-------------ETNIRLNPLLPLPPPNPSNPPKIALPICRLTAV 164
+TP +++ E R N L P + PK L A+
Sbjct: 318 RSQGHTPKEGSSKGPSGKDGKGKDKRKEFTPRTNCFLCDGPHWARDYPKRKA----LNAM 373
Query: 165 EMQTRQEPSE---ILQEEEILVEDTVPKQ--------LSAKINNKPLSVLIDTGSTHNYL 213
+ QE LQ L +PK + A +N K L+DTG+THN++
Sbjct: 374 IEEKEQEGDAKMGSLQLLNALKAKPMPKTPQSKGLMYVEALVNGKVTKALVDTGATHNFV 433
Query: 214 HPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADA 273
A L L K +L AV + + E C V + DF +
Sbjct: 434 SEEKARRLELQASKEGGWLKAVNSAAKPSHEVACG-VTMHIGSWEGRVDFTVAPMDDFKM 492
Query: 274 VLGVQWLEKLGKI 286
VLG+ +L+K+ +
Sbjct: 493 VLGMDFLQKVKAV 505
>gi|78708471|gb|ABB47446.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1705
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 629 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 672
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q + F A+
Sbjct: 673 FDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRLPFLANL 732
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 733 ILLESKYLDVILGMDWLTKFKGVI 756
>gi|62733026|gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549637|gb|ABA92434.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1847
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 809 VNSVPATVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 868
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 869 QEVPFLANLILLESKDLDVILGMDWLARYKGVI 901
>gi|147769429|emb|CAN61575.1| hypothetical protein VITISV_014037 [Vitis vinifera]
Length = 503
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 90/238 (37%), Gaps = 33/238 (13%)
Query: 74 FISGLKPTIQNELAIHKPSNLRDAIALAK---LIEDKLQSYNQKSISWKPTNTPIPTTTR 130
F GL+P I+N L P +RD L K L+E + NQ I + + R
Sbjct: 207 FQQGLRPAIRNRLV---PLAIRDYSELVKRALLVEQDIDETNQ--IREQKGDRKGKQRMR 261
Query: 131 NETN-----IRLNPLLPLPPPNPSNPPKIALPI--CRLTAVEMQTRQEPSEIL------- 176
N + LPP + + + RQ +
Sbjct: 262 ERGGQIAQRAAANRMPQLPPAAQGTRTATTSQTRSSQGSNARGRGRQTAGRVFALTPTES 321
Query: 177 QEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVA-- 234
+E+ +LVE + + + + VL DTG+TH+++ A+ L E+ + L+
Sbjct: 322 EEDALLVEGMIL------VYSTWVHVLFDTGATHSFISISCANASGLKSERVENLLLIES 375
Query: 235 -VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHK 291
+G ++ + C + + D ILD + D +LG+ WL II H+
Sbjct: 376 PMGTNSKV--DRICKGCVITLVDIALNVDLRILDMTGYDVILGMDWLAVYRAIIDCHR 431
>gi|13129458|gb|AAK13116.1|AC080019_8 polyprotein [Oryza sativa Japonica Group]
Length = 2162
Score = 43.9 bits (102), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 963 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 1006
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q + F A+
Sbjct: 1007 FDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRLPFLANL 1066
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 1067 ILLESKYLDVILGMDWLTKFKGVI 1090
>gi|55168121|gb|AAV43988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1594
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 532 VNLVPATVLFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 591
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL++ +I
Sbjct: 592 QEVPFLANLILLESKDLDVILGMDWLDRHKGVI 624
>gi|14018099|gb|AAK52162.1|AC084831_16 putative polyprotein [Oryza sativa Japonica Group]
gi|108709291|gb|ABF97086.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1461
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +HL I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHLLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|116830377|gb|ABK28146.1| unknown [Arabidopsis thaliana]
Length = 85
Score = 43.9 bits (102), Expect = 0.097, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADA--VLGVQWLEKLGKIITDH 290
+G+G+ I S+G C + +Q D+ +LD ++ DA +LG +WL KLG+ + ++
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIEN 58
>gi|91805353|gb|ABE65406.1| hypothetical protein At1g53705 [Arabidopsis thaliana]
Length = 84
Score = 43.9 bits (102), Expect = 0.097, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADA--VLGVQWLEKLGKIITDH 290
+G+G+ I S+G C + +Q D+ +LD ++ DA +LG +WL KLG+ + ++
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIEN 58
>gi|31415958|gb|AAP50978.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108710193|gb|ABF97988.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1564
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH++L + +E L+ + S V+ E+
Sbjct: 512 VNSVPATVLFDSGATHSFLSMSFVGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 571
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q V F A+ +L+ D +LG+ WL + +I
Sbjct: 572 QEVTFLANLILLESKDLDVILGMDWLARYKGVI 604
>gi|77553383|gb|ABA96179.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 770
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 174 EILQE--EEILVEDTVPKQ---LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKT 228
+ILQE EEIL +T ++ + I+ + +V ++GST++++ ++ + E
Sbjct: 140 DILQEDTEEILSAETATQKEDLIVMAISQQAANV-TESGSTNSFIDEQVGMKMIGVEEFQ 198
Query: 229 MSFLVAVGNGERIRSEGHCSKV----KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLG 284
S V + +G ++ CSK+ + MQG F+ DF ++ D +LG+ WL++
Sbjct: 199 HSLKVQIADGGQLI----CSKILPGCNWCMQGHSFKNDFKLIPLGSYDIILGMDWLQQHS 254
Query: 285 KIITDHKALTMEFTYK 300
+ D +EF Y+
Sbjct: 255 PMQIDWIQKWVEFQYQ 270
>gi|38346696|emb|CAE02181.2| OSJNBa0080E14.12 [Oryza sativa Japonica Group]
Length = 1476
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL +G+TH++L A + +E L+ + S V+ E+
Sbjct: 373 VNLVPATVLFASGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 432
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 433 QGVPFLANLILLESKDLDVILGMDWLARYKGVI 465
>gi|108710148|gb|ABF97943.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L EK + + G S V E+
Sbjct: 653 VNSVPATVLFDSGATHSFISKQFVGIHGLIREKLSTPMRVHTPGNSSTSVQFSPSVTIEI 712
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 713 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 745
>gi|449464816|ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
Length = 2047
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 186 TVPKQLSAK--INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRS 243
T P K + ++ + +++D G+THN++ L L + +T ++ V +G+ + ++
Sbjct: 760 TAPSTFKVKGTVEDREIIIMVDCGATHNFISLMRVEKLKLPMAETTNYDVIMGSRKAVQG 819
Query: 244 EGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
G C + + + DF L+ D VL W + D +A+ +
Sbjct: 820 RGMCKGITVGLPVLTIIEDFLPLELGNLDMVLVKTWQLDDQGFLVDFRAMGI 871
>gi|29244623|gb|AAO73216.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|31712104|gb|AAP68408.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1185
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L EK + + G S V E+
Sbjct: 653 VNSVPATVLFDSGATHSFISKQFVGIHGLIREKLSTPMRVHTPGNSSTSVQFSPSVTIEI 712
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 713 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 745
>gi|38344348|emb|CAD40170.2| OSJNBa0061A09.9 [Oryza sativa Japonica Group]
Length = 1653
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 602 VNSIPATVLFDSGATHSFISKKFVGVHGLIREELSTPMRVHTPGNSSSSVQFSPSITIEI 661
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG F A+ +L+ D +LG+ WL K +I
Sbjct: 662 QGSPFLANLILLESKDLDVILGMDWLTKFKGVI 694
>gi|54291789|gb|AAV32158.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1131
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P N SN P + + A E Q + LV T P +N+ P VL
Sbjct: 316 PVQNNSNAPAPKAHVNHVAAAEAQNAPK----------LVLGTFP------VNSIPAYVL 359
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH++L A + + L+ G ++ S +C+ V E++ + F +
Sbjct: 360 FDSGATHSFLSKIFASDHGMEVISLGRPLLVNTLGNQVSSTQYCTSVTIEIEEIPFLSSL 419
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
L+ D +LG+ WL + +I
Sbjct: 420 ISLESKDLDVILGMDWLTRHRGVI 443
>gi|90186404|gb|ABD91504.1| putative polyprotein [Oryza sativa Indica Group]
Length = 932
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 295 VNSIPATVLFDSGATHSFISKKFVG-VHGLIREELSTPIRVHTPGNSSTSVQFSPSITIE 353
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +LD D +LG+ WL K +I
Sbjct: 354 IQRSPFLANLILLDSKDLDVILGMDWLTKFKGVI 387
>gi|147867197|emb|CAN82051.1| hypothetical protein VITISV_042770 [Vitis vinifera]
Length = 429
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 25 SRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQN 84
+RFGP + L ++ Q S+ YQ FE + NRV A++ F+ GL+ I +
Sbjct: 88 ARFGPLECEDFDEALSRIRQVGSLRDYQREFERLGNRVQGWTQRALVGTFMGGLRSDISD 147
Query: 85 ELAI 88
L I
Sbjct: 148 GLDI 151
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 272 DAVLGVQWLEKLGKIITDHKALTMEFTYK 300
D VLG+QWLE LG ++ D + LTMEF ++
Sbjct: 150 DIVLGIQWLELLGSVVCDWRELTMEFMWE 178
>gi|440635416|gb|ELR05335.1| hypothetical protein GMDG_07318 [Geomyces destructans 20631-21]
Length = 257
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 38 TLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELA-IHKPSNLRD 96
TL L Q S AY + F+ +TN +AI D F +GLK +++E++ KP +LR+
Sbjct: 126 TLKALKQRGSAVAYTAEFQQHAT-LTNWGEEAICDQFYAGLKDHVKDEISRSDKPDDLRE 184
Query: 97 AIALAKLIEDK 107
I LA+ I+++
Sbjct: 185 MIELAQKIDNR 195
>gi|21740440|emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
Length = 1831
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++++++ + ++ G IR+ C +V +
Sbjct: 758 VNSVPAIVLFDSGASYSFISQAFVKRNGWKTQNLRLPMIVHSPGRNIRATQVCPEVNLRI 817
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 818 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 860
>gi|384501160|gb|EIE91651.1| hypothetical protein RO3G_16362 [Rhizopus delemar RA 99-880]
Length = 1200
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 17/98 (17%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL----VAVGNGER--IRSEGHCS 248
IN + LID+G++ NY+HP++ LA+ + + V NGE+ I E C+
Sbjct: 95 INGQTFEALIDSGASANYIHPKV-----LAVADSYRPVNNQAVETANGEQSIISGEATCT 149
Query: 249 KVKFEMQGVG--FEADFHILDF-SRADAVLGVQWLEKL 283
E++G G F F F S+ D +LG WL+++
Sbjct: 150 ---MEVKGEGKIFINTFKAFVFESKFDVILGTSWLKQV 184
>gi|384491781|gb|EIE82977.1| hypothetical protein RO3G_07682 [Rhizopus delemar RA 99-880]
Length = 749
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
IN + LID+G++ NY+HP++ + + + V NGE+ I E C K
Sbjct: 104 INGHAFNALIDSGASANYIHPKVLKVVE-SYHPVKNQAVETANGEQTIIHGEATC---KM 159
Query: 253 EMQG--VGFEADFHILDF-SRADAVLGVQWLEKL 283
E++G F + F F S+ D +LG WL+++
Sbjct: 160 EIRGEEKNFISTFKAFVFESKFDIILGSSWLKQV 193
>gi|110288861|gb|ABB47133.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1577
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +V D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 564 VNLVPATVPFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 623
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 624 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 656
>gi|38345756|emb|CAE03484.2| OSJNBa0065O17.9 [Oryza sativa Japonica Group]
Length = 1851
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+ + + ++ G IR+ C +V +
Sbjct: 756 VNSVPAIVLFDSGASHSIISQAFVKRNGWKTQNLRVPMIIHSPGRNIRATQICPEVNLRI 815
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 816 EEVNFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAKKSITLQ 858
>gi|147863107|emb|CAN82973.1| hypothetical protein VITISV_039522 [Vitis vinifera]
Length = 798
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 174 EILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL- 232
E ++E+ JLVE + + + VL DTG+T ++++ + L L E + L
Sbjct: 124 EKMREDAJLVEGMISXY------STWVHVLFDTGATQSFIYASCXNALRLKTEMVENLLL 177
Query: 233 VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
+ + G R + C + + + D +LD + D +LG+ WL
Sbjct: 178 IELPMGMNSRVDKICKRCVITLADKALKVDLRVLDMTGYDVILGIDWL 225
>gi|77555928|gb|ABA98724.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1269
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCF 74
+ A+ ++FG + + +L Q ++ +Y F + +++ HP + F
Sbjct: 188 FSEAVCAKFGREEFQSLIRQFKRLRQEGTILSYVEKFNELMHQLYAHHPSWNSVFFITEF 247
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKS 115
+ GLKP + + + +H+P++L A+ LA L E+ L++ + S
Sbjct: 248 LDGLKPEVSSAVILHRPNDLDTAVDLACLQEEVLEAGRRDS 288
>gi|38345562|emb|CAE03436.2| OSJNBa0032F06.19 [Oryza sativa Japonica Group]
Length = 1575
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 233 VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
V V NG + K+E+QG F +F +L D +LG+ WLEK + + +A
Sbjct: 540 VKVANGTVLYCTSELPAAKWEVQGHQFSTNFKLLPLDNYDMILGMDWLEKYSPMDINWQA 599
Query: 293 LTMEF 297
T++F
Sbjct: 600 KTIQF 604
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 33/170 (19%)
Query: 23 IESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD-AILDC---FISGL 78
++ +F + ++ + +L Q+ SV Y F+++ +++ P + + C F GL
Sbjct: 273 VDRKFDRNRHLQLVRQIDQLKQSGSVNEYYERFDDLWSQLLVYDPTLSTVSCVHRFTEGL 332
Query: 79 KPTIQNELAIHKPSNLRDAIALAKLIED------KLQSYNQKSISWKPTNTPIPTTTRNE 132
+ I+N + +H P +L A+ALA L E+ L S + K + +
Sbjct: 333 RSDIKNAVLMHFPQDLETALALAILQEELGEAGGSLVSKDGKKLG------------DHA 380
Query: 133 TNIRLNPLLPLPPPN-----------PSNPPKIALPICRLTAVEMQTRQE 171
I+ LPLPPP + PK+A +L A++ R +
Sbjct: 381 ARIKGAYPLPLPPPKFVHAGKGDDKRAAEVPKVASSSDKLVALKAYRRAQ 430
>gi|147845507|emb|CAN80599.1| hypothetical protein VITISV_016761 [Vitis vinifera]
Length = 1404
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 112/293 (38%), Gaps = 43/293 (14%)
Query: 18 ALTRAIESRFGPS--SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFI 75
A R I+ +F P +Y+ R +L +L S+ Y F + + N+ + +L F+
Sbjct: 216 AFKREIKRQFYPEDVAYLA-RKSLKRLKHMGSIREYVKEFSTLMLEIPNMAEEELLFNFM 274
Query: 76 SGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNI 135
L+ + EL +L A+A+A+ + D + + K P P + N+
Sbjct: 275 DNLQSWAEQELRRRGVQDLATAMAVAESLVDYRRGDSSK---------PKPPSKGNQAKG 325
Query: 136 RLNPLLPLPPPNPSNP------------------PKIALPICRL--TAVEMQTRQEPSEI 175
+ P + P+ +C A + R+ + +
Sbjct: 326 GGDKRSQGHTPKEGSSKGLSGKDGKGKGKRKEFTPRTNCFLCDGPHWARDCPKRKALNAM 385
Query: 176 LQEEEILVEDTVPKQLSAK--INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV 233
++E+E K+ AK +N K L+DT +THN++ A L K +L
Sbjct: 386 IEEKE--------KEGDAKALVNGKATKALVDTSATHNFVSEDEARRLEFQASKEGGWLK 437
Query: 234 AVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
AV + + S G V + DF + VLG+ +L+K+ +
Sbjct: 438 AVNSAAKP-SHGVARGVTMHIGSWEGRVDFTVAPMDHFKMVLGIDFLQKVKAV 489
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
++ K+ N + VL+D+G+THN++ +L L L I + + +G+G + S+G C
Sbjct: 1013 KIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLGDGHEVLSQGVC 1070
>gi|242081169|ref|XP_002445353.1| hypothetical protein SORBIDRAFT_07g011900 [Sorghum bicolor]
gi|241941703|gb|EES14848.1| hypothetical protein SORBIDRAFT_07g011900 [Sorghum bicolor]
Length = 1488
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLA--HFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKF 252
+N P VL D+G++H+++ A H H+ + F ++ G +I + V+
Sbjct: 320 VNQHPTVVLFDSGASHSFMSQTFASKHGQHVIDLDSGKFCISAA-GNQIATNQVVRDVQI 378
Query: 253 EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTM 295
++G + A+ IL D +LG++W+ G +I + M
Sbjct: 379 AIEGRNYSANLVILPGLGIDVILGMKWMSDHGVLIDTSTRVIM 421
>gi|38346970|emb|CAD39728.2| OSJNBb0049I21.6 [Oryza sativa Japonica Group]
Length = 1606
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ VL D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 305 LNSTPVKVLFDSGASHSFISLKSSQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 364
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K II
Sbjct: 365 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGII 397
>gi|77554734|gb|ABA97530.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 567
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +VL D+G+TH+++ + A L E+ + + G S + V E+
Sbjct: 304 VNTIPATVLFDSGATHSFISKKFAGVHGLRKEELSTPMRVHTPGNSSTSVSYSPSVLIEI 363
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 364 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 396
>gi|357459751|ref|XP_003600156.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355489204|gb|AES70407.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 651
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV----AVGNGERIRSEGHCSKV 250
N+ PL +IDTG+TH ++ A+ L L + +V A G+ + + C +
Sbjct: 434 FNSTPLIAIIDTGATHCFIALESAYKLGLIVSDMKEEMVVETPAKGS---VTTSLVCLRC 490
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G FE D L + D + G+ WLE
Sbjct: 491 PISMFGRDFEVDLVCLPLTGMDVIFGMNWLE 521
>gi|110289210|gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1291
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S + V E+
Sbjct: 387 VNSVPATVLFDSGATHSFISKKFVGMYGLRKKELSTPMKVHTPGNSSTSVSYSPSVLIEI 446
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+F +L+ D +LG+ WL K +I
Sbjct: 447 QRSPFLANFILLESKDLDVILGMDWLTKFKGVI 479
>gi|324504194|gb|ADY41812.1| Protein DDI1 2 [Ascaris suum]
Length = 528
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLA---HFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
++ KIN +P+ +D+G+ + L R+A + + L E+ + VG +R+ + H
Sbjct: 345 INMKINGEPVKAFVDSGAQVSILSERVAIRCNLMRLVDERFQGVVHGVGGAQRLLGKIHT 404
Query: 248 SKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
+V+ E G F +F +L D +LG+ L +
Sbjct: 405 CQVQVE--GNFFPCNFDVLADRDIDVLLGLDILRR 437
>gi|449490958|ref|XP_004158759.1| PREDICTED: uncharacterized protein LOC101229900 [Cucumis sativus]
Length = 1408
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNE 85
RF S + ++ Q ++VE Y++ F+ + + +L + + F++GL P I+ E
Sbjct: 1172 RFRSSREGSICGQFLRIKQQTTVEEYRNEFDRLMAPLADLQDRVVEETFMNGLFPWIKAE 1231
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPP 145
+ KP L + + A+L+E++ R E N+ PP
Sbjct: 1232 VVFCKPVGLAEMMHAAQLVENR-------------------EIIRKEANLNGYATGKYPP 1272
Query: 146 PNPS 149
PN S
Sbjct: 1273 PNSS 1276
>gi|432860371|ref|XP_004069523.1| PREDICTED: uncharacterized protein LOC101162523 [Oryzias latipes]
Length = 813
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 21/141 (14%)
Query: 35 HRAT---LFKLTQTS-SVEAYQSTFENICNRVTNLHPD-AILDCFISGLKPTIQNELAIH 89
HRA L +L Q S V Y F + + PD A+LD F+ GL +++ELA
Sbjct: 155 HRAAASELLRLQQGSRCVSDYAVEFRTLA--ASTRWPDEALLDVFLRGLSDALKDELAAR 212
Query: 90 K-PSNLRDAIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNP 148
+ P +L + I LA I+ +++ + S P P +PLPP N
Sbjct: 213 ELPDDLEELIDLAVRIDRRVRERGNEQRSLPGYRPPRPAE------------VPLPPSN- 259
Query: 149 SNPPKIALPICRLTAVEMQTR 169
S P + L RL+ E Q R
Sbjct: 260 SPPEPMQLGAGRLSPAERQRR 280
>gi|374081772|dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHL---AIEKTMSFLVAVGNGERIRSEGHCSKVK 251
I+N +S L DTG++ ++ ++A L+L +EK +S +G ++ +V
Sbjct: 18 IDNLAVSALFDTGASGTFVSSKIARKLNLPLQELEKPLSITTPLGRVTKVAQV--LPQVD 75
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEK 282
+ ++D +LDF+ D +LG+ WL K
Sbjct: 76 VRVGAYRCKSDLTVLDFTNFDVILGMDWLSK 106
>gi|240254260|ref|NP_683428.4| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194863|gb|AEE32984.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 131
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSR--ADAVLGVQWLEKLGKIITDH 290
+G+G+ I S+G C + +Q D+ +LD ++ AD +LG +WL KLG+ + ++
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETMIEN 58
>gi|108708503|gb|ABF96298.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1357
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 45/83 (54%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 588 IHSTPATILFDSGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTTKYYSPAVPIEI 647
Query: 255 QGVGFEADFHILDFSRADAVLGV 277
QG+ F +D +LD D +LG+
Sbjct: 648 QGIPFPSDLILLDTKNLDVILGM 670
>gi|57863925|gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
Length = 2108
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L KI + +L+D+GS +++ +LA L V V NG+ + +
Sbjct: 1169 RLQGKIQGLNILMLVDSGSLASFISDQLADRLTGVQFLAHPLSVKVANGQVLHCQKEMPS 1228
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++ + G F F ++ DA+LG+ WL K + D + ++ T G
Sbjct: 1229 AEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMQIDWQLKSIHLTVMG 1280
Score = 37.7 bits (86), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCFISGLKPTIQNELAIHKPSNL 94
L ++ QT SV + F+++ N++ P ++ FI GL+ I+ + +H P +L
Sbjct: 966 LDQIKQTGSVSEFYERFDDLMNQLLTYDPMYNTLNLVHRFIEGLRFDIREAVLLHCPEDL 1025
Query: 95 RDAIALAKLIEDKLQSYNQK 114
A+ LA L++++L NQ+
Sbjct: 1026 ESALVLA-LLQEELSERNQE 1044
>gi|23266283|gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430814|gb|AAP52680.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1796
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 644 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 687
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q F A+
Sbjct: 688 FDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRSPFLANL 747
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 748 ILLESKDLDVILGMDWLTKFKGVI 771
>gi|58532079|emb|CAE04985.3| OSJNBa0057M08.11 [Oryza sativa Japonica Group]
Length = 1664
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+ H++L A + +++ L+ + S V+ E+
Sbjct: 867 VNSVPATVLFDSGAMHSFLSMSFAGNQGMEVKELRRPLMVSTPSNQALSSQRSPSVRIEI 926
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTME 296
QGV F A+ +L+ D +LG+ + G+++T H AL+ E
Sbjct: 927 QGVPFLANLILLESKDLDVILGMDCND--GRVVTVH-ALSSE 965
>gi|22758322|gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group]
Length = 1471
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S + V E+
Sbjct: 567 VNSVPATVLFDSGATHSFISKKFVGMYGLRKKELSTPMKVHTPGNSSTSVSYSPSVLIEI 626
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+F +L+ D +LG+ WL K +I
Sbjct: 627 QRSPFLANFILLESKDLDVILGMDWLTKFKGVI 659
>gi|384500689|gb|EIE91180.1| hypothetical protein RO3G_15891 [Rhizopus delemar RA 99-880]
Length = 954
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
IN + LID+G++ NY+HP++ + + + V NGE+ I E C K
Sbjct: 62 INGHAFNALIDSGASANYIHPKVLKVVE-SYHPVKNQAVETANGEQTIIHGEATC---KM 117
Query: 253 EMQG--VGFEADFHILDF-SRADAVLGVQWLEKL 283
E++G F + F+ F S+ D +LG WL+++
Sbjct: 118 EIRGEEKNFISTFNAFIFESKFDIILGNSWLKQV 151
>gi|31432273|gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1364
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+G+TH+++ + L E+ + + G S V E+
Sbjct: 404 VNSIPATILFDSGATHSFISKKFVGMHGLRKEELSTLMRVYTLGNSSTSVSFSPSVLIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|116308998|emb|CAH66117.1| OSIGBa0146N20.2 [Oryza sativa Indica Group]
Length = 1521
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +LD D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLDSKGLDVILGMDWLTKFKGVI 496
>gi|2133292|pir||S60179 pol polyprotein homolog - fungus (Fusarium oxysporum)
retrotransposon skippy
gi|510697|gb|AAA88791.1| pol polyprotein [Fusarium oxysporum]
Length = 1295
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSE-GHC 247
+L +I K LS L+D+G+ N++ P + L L +K + V G GE E G+
Sbjct: 85 ELKVRIKGKWLSALVDSGADMNFISPTTVNELRLPWKDKNDPYTVHDGQGETYLYENGNI 144
Query: 248 SK----VKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
++ +K + G DF I+ R D VLG WL
Sbjct: 145 TREIDHLKVFVNGKNQGIDFDIIPVWRYDLVLGYPWL 181
>gi|18657020|gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa]
gi|21321760|gb|AAM47295.1|AC122146_14 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430576|gb|AAP52470.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1819
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 702 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 760
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +LD D +LG+ WL K +I
Sbjct: 761 IQRSPFLANLILLDSKGLDVILGMDWLTKFKGVI 794
>gi|356558443|ref|XP_003547516.1| PREDICTED: respiratory burst oxidase homolog protein E-like
[Glycine max]
Length = 972
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDC----F 74
+ +A+ES F PS Y N + LFKL Q S+V+ Y + FE + N++ + + C F
Sbjct: 1 MLQALESCFAPSFYENPQGALFKLQQCSTVKDYLTEFERLANQIMAMKIVSDTHCWEVQF 60
Query: 75 ISG------LKPTIQNELA 87
I G L P Q LA
Sbjct: 61 IEGDWVCVKLHPYRQTSLA 79
>gi|384499160|gb|EIE89651.1| hypothetical protein RO3G_14362 [Rhizopus delemar RA 99-880]
Length = 1122
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
IN + LID+G++ NY+HP++ + + + V NGE+ I E C K
Sbjct: 166 INGHAFNALIDSGASANYIHPKVLKVVE-SYHPVKNQAVETANGEQTIIHGEATC---KM 221
Query: 253 EMQG--VGFEADFHILDF-SRADAVLGVQWLEKL 283
E++G F + F F S+ D +LG WL+++
Sbjct: 222 EIRGEEKNFISTFKAFVFESKFDIILGNSWLKQV 255
>gi|77551789|gb|ABA94586.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1710
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 750 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITMSHACIDVPIRL 809
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 810 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 842
>gi|77549254|gb|ABA92051.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S + E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVRMHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEIQRSPFLANL 728
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 729 ILLESKDLDVILGMDWLTKFKGVI 752
>gi|77553655|gb|ABA96451.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1351
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 390 VNSIPATVLFDSGATHSFISKKFVG-VHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 448
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +LD D +LG+ WL K +I
Sbjct: 449 IQKSPFLANLILLDSKDLDVILGMDWLTKFKGVI 482
>gi|38567683|emb|CAE75973.1| B1160F02.4 [Oryza sativa Japonica Group]
Length = 1618
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+ ++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 699 IHSIPATILFDSRASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 758
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q + F +D +LD D +LG+ WL + ++
Sbjct: 759 QRIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 791
>gi|116309026|emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
Length = 1421
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVR-MHWLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|384491412|gb|EIE82608.1| hypothetical protein RO3G_07313 [Rhizopus delemar RA 99-880]
Length = 934
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
IN + LID+G++ NY+HP++ + + + V NGE+ I E C K
Sbjct: 166 INGHAFNALIDSGASANYIHPKVLKVVE-SYHPVKNQAVETANGEQTIIHGEATC---KM 221
Query: 253 EMQG--VGFEADFHILDF-SRADAVLGVQWLEKL 283
E++G F + F F S+ D +LG WL+++
Sbjct: 222 EIRGEEKNFISTFKAFIFESKFDIILGNSWLKQV 255
>gi|19881555|gb|AAM00956.1|AC021892_20 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1167
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P +V D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 111 VNLVPATVPFDSGATHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 170
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QGV F A+ +L+ D +LG+ WL + +I
Sbjct: 171 QGVPFLANLILLESKDLDVILGMDWLARHKGVI 203
>gi|334183277|ref|NP_001185213.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
gi|332194864|gb|AEE32985.1| aminoacyl-tRNA synthetase, class II-like domain containing protein
[Arabidopsis thaliana]
Length = 154
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 235 VGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSR--ADAVLGVQWLEKLGKII 287
+G+G+ I S+G C + +Q D+ +LD ++ AD +LG +WL KLG+ +
Sbjct: 1 MGHGQHIESKGSCLGISLWIQEAAIVEDYLLLDLNKTDADVILGYKWLSKLGETM 55
>gi|347831120|emb|CCD46817.1| hypothetical protein [Botryotinia fuckeliana]
Length = 420
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 35 IFNLKQTGSALKYATEFRRYAG-TTKWDDTAIMSHYRKGLKPEVRLELERSAESVDLNDL 93
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 94 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 136
>gi|395322802|gb|EJF55434.1| hypothetical protein DICSQDRAFT_74003, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 223
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P L+D+GS +++ RLAH L L + K + +AV G R +
Sbjct: 18 PVVVVVQVNEQPARALVDSGSLSDFMSARLAHQLGLEVFELTKPLPVQLAV-QGSRAKIN 76
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C +V+ E Q + E F +++ D +LG ++
Sbjct: 77 FGC-RVRLEYQRIRTERYFDVINLLNYDLILGTPFI 111
>gi|255576772|ref|XP_002529273.1| conserved hypothetical protein [Ricinus communis]
gi|223531262|gb|EEF33105.1| conserved hypothetical protein [Ricinus communis]
Length = 278
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ + I K + +L+D+ STH++L ++A + I K + V N + S G C K
Sbjct: 189 KIKSSIGGKTIMILVDSRSTHSFLDVKVAKDVGSHIVKAPPLNITVANSLCMWSRGRCEK 248
Query: 250 VKFEMQGVGFEADFHILDFS 269
+ ++MQG F + +L+
Sbjct: 249 LTWDMQGHHFCFNIRVLELG 268
>gi|53981183|gb|AAV24823.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1374
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 295 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 353
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +LD D +LG+ WL K +I
Sbjct: 354 IQRSPFLANLILLDSKDLDVILGMDWLTKFKGVI 387
>gi|77550665|gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1687
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 616 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 674
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+QG F A+ +L+ + +LG+ WL K +I
Sbjct: 675 IQGSPFLANLILLESKDLNVILGMDWLTKFKGVI 708
>gi|77552427|gb|ABA95224.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1570
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAQEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEAD 262
D+G+TH+++ + +H I + +S + V G S + E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEIQRSPFLAN 727
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 728 LILLESKDLDVILGMDWLTKFKGVI 752
>gi|38605882|emb|CAD40008.3| OSJNBb0052B05.11 [Oryza sativa Japonica Group]
Length = 1232
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D G++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 286 IHSIPATILFDFGASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 345
Query: 255 QGVGFEADFHILDFSRADAVLGV 277
QG+ F +D ILD D +LG+
Sbjct: 346 QGIPFPSDLIILDTKNLDVILGM 368
>gi|147769722|emb|CAN69702.1| hypothetical protein VITISV_020318 [Vitis vinifera]
Length = 1454
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ A +N K L+DTG+THN++ A L L K +L AV + + S G +V
Sbjct: 354 VEALVNGKATKALVDTGATHNFVSKDEARRLELQASKEGGWLKAVNSAAKP-SHGVAREV 412
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
+ DF + VLG+ +L+K+ +
Sbjct: 413 TMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVXAV 448
>gi|384494756|gb|EIE85247.1| hypothetical protein RO3G_09957 [Rhizopus delemar RA 99-880]
Length = 453
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L A ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPACPAHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|77551642|gb|ABA94439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1267
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|77555766|gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1824
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ IR+ C +V +
Sbjct: 773 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPRSNIRATQICPEVNLRI 832
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 833 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 875
>gi|53981934|gb|AAV25052.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1777
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEAD 262
D+G+TH+++ + +H I + +S + V G S + E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEIQRSPFLAN 727
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 728 LILLESKDLDVILGMDWLTKFKGVI 752
>gi|147864892|emb|CAN79373.1| hypothetical protein VITISV_028502 [Vitis vinifera]
Length = 1439
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 95/239 (39%), Gaps = 50/239 (20%)
Query: 19 LTRAIESRFGPS--SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFIS 76
L + ++ +F P+ +++ R L +L T SV Y F ++ + N+ + L F+S
Sbjct: 154 LKKELKDQFLPTNTAWVA-REALKRLKHTGSVREYVKEFSSLMLDIKNMSEEDKLFNFMS 212
Query: 77 GLKPTIQNELAIHKPSNLRDAIALAKLIED---------------------KLQSYNQKS 115
GL+ Q EL +L A+A A + D K + K
Sbjct: 213 GLQGWAQTELRRQGVRDLPAAMAAADCLVDYKMGGAISTTQRPRSEGGNKAKFEGKTSKK 272
Query: 116 ISWKPT-------NTPIPTTTRN-ETNIRLNPLLPLP---PPNPSNPPKIALPICRLTAV 164
WK P+ TT++ +L+ L+ +P PP++ P+ L +
Sbjct: 273 SEWKKQGKKPAVGGKPVEKTTKDCPKREKLSALVTAEDKGDSDPETPPRVN-PLQLLNVI 331
Query: 165 EMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHL 223
+T + S + + A +N + L+D+G+THN++ + A L L
Sbjct: 332 HGETPVQKSLM--------------HIHAMVNGVQVKALVDSGATHNFVATKEATRLGL 376
>gi|108709963|gb|ABF97758.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1090
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 23/109 (21%)
Query: 201 SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK----------- 249
S ID+G+T + + L F + + V NGERI + G C +
Sbjct: 167 SWWIDSGATIHVANS-LQGFAMRRTLRRGERRIRVANGERISTHGDCQRGPLGCKRACPG 225
Query: 250 -----------VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
V E+QG+ F +D +LD D +LG+ WL + ++
Sbjct: 226 EGGTLQYYSPAVPIEIQGIPFPSDLILLDTKNLDVILGMNWLAQFQGVV 274
>gi|34015139|gb|AAQ56336.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 674
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 233 VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKA 292
V V NG ++ E K+E+QG F F +L + D +LG+ WLE+ + D +
Sbjct: 402 VRVANGSILQCESELPNAKWEVQGNTFHTTFKVLPLNNYDVILGMDWLEQHSPMDIDWQK 461
Query: 293 LTMEFTYKG 301
T+ G
Sbjct: 462 KTLSLQGNG 470
>gi|53981935|gb|AAV25053.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1777
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEAD 262
D+G+TH+++ + +H I + +S + V G S + E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEIQRSPFLAN 727
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 728 LILLESKDLDVILGMDWLTKFKGVI 752
>gi|154304915|ref|XP_001552861.1| hypothetical protein BC1G_09043 [Botryotinia fuckeliana B05.10]
Length = 303
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT SV Y F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSVLKYAMEFRRYAG-TTKWDEIAIMSYYRKGLKPEVRLELERSVESIDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGCYCKNEGRPRYNP 239
>gi|147828587|emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]
Length = 701
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEGHCSKVKFEMQGVG 258
+ VL DTG+TH+++ A+ L L E+ + L+ G R + C +
Sbjct: 9 VRVLFDTGATHSFISASCANALGLKTERVENLLLIESPMGMNXRVDRICKGCVITLADRA 68
Query: 259 FEADFHILDFSRADAVLGVQWL 280
D ILD D +LG+ WL
Sbjct: 69 LNVDLRILDMXGYDVILGMDWL 90
>gi|55168098|gb|AAV43966.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1684
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ IR+ C +V +
Sbjct: 695 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPWRNIRATQICPEVNLRI 754
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 755 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 797
>gi|77554007|gb|ABA96803.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1500
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 18/145 (12%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 369 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 412
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFEMQGVGFEAD 262
D+G+TH+++ + +H I + +S + V G S + E+Q F A+
Sbjct: 413 FDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEIQMSPFLAN 471
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 472 LILLESKDLDVILGMDWLTKFKGVI 496
>gi|154289208|ref|XP_001545259.1| hypothetical protein BC1G_16215 [Botryotinia fuckeliana B05.10]
Length = 290
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|116317830|emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]
Length = 1670
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ +VL D+G+TH++L A + +E L+ + S V+ E+
Sbjct: 594 VNSVLATVLFDSGATHSFLSVSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEI 653
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITD 289
+GV F A+ +L+ D +LG+ WL + K +TD
Sbjct: 654 KGVPFLANLILLESKDLDVILGMDWLAR-HKGVTD 687
>gi|359372825|gb|AEV42258.1| hypothetical protein [Beta vulgaris]
Length = 1553
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 179 EEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG 238
EE D V S IN+ P+ VL D+G++ +++ L L +++S + + +G
Sbjct: 387 EEEARRDVVTGTFS--INSTPVKVLFDSGASLSFIAHATVRNLTLVESESISMPIVIPSG 444
Query: 239 ERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
E + KV ++ F +D + S D +LG+ WL K + +I D + + ++
Sbjct: 445 ETVNCSKRFLKVPLKIGEGYFPSDLIEFNLSNLDIILGMDWLGKYMARIDCDAQKVELK 503
>gi|4680179|gb|AAD27547.1|AF111709_1 polyprotein [Oryza sativa Indica Group]
Length = 1521
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVGMYGLRKEELRTPMRVHTPGNSSTSVSFSPSVLIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|395322891|gb|EJF55477.1| hypothetical protein DICSQDRAFT_73785, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 372
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHL---AIEKTMSFLVAVGNGERIRSEGHCSKVK 251
IN +P+ L+DTGS +++ +LAH L + + K M +AV G R + C+ +
Sbjct: 152 INGQPVRALLDTGSLADFMSAKLAHQLKVETFELAKPMPLHLAV-QGSRAKINYGCT-AQ 209
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
E Q + + F I++ D +LG + + HK LT
Sbjct: 210 VEYQSINAKRYFDIINLLNYDVILGTPFFFQ-------HKVLT 245
>gi|242763310|ref|XP_002340550.1| gag/polymerase/env polyprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723746|gb|EED23163.1| gag/polymerase/env polyprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 804
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEG---HCSKVKFEMQGVG 258
+ID+G+T NY+ R L + +K + + G NGE++ EG + + G
Sbjct: 1 MIDSGATGNYMDLRTQEKLQILGQKKPTLIPLTGLNGEKLSEEGITDETGWLAMSIDGHL 60
Query: 259 FEADFHILDFSRADAVLGVQWLEK 282
+F I R D +LG+ WL K
Sbjct: 61 EMINFDIAKLGRDDVILGIPWLRK 84
>gi|395322845|gb|EJF55454.1| hypothetical protein DICSQDRAFT_73902, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 398
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P LID+GS +++ RLAH L L I K + +AV G R +
Sbjct: 194 PVVVVVQVNEQPARALIDSGSLSDFMSARLAHQLGLEIFELTKPLPIQLAV-QGSRAKVN 252
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C + + E Q + E F +++ D +LG ++
Sbjct: 253 FGC-RARLEYQRIRTERYFDVINLLNYDLILGTPFI 287
>gi|38345527|emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group]
Length = 1537
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 307 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 366
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ IL D +LG+ WL K +I
Sbjct: 367 RDVVFPSNLMILIPQTLDVILGMDWLTKNRGVI 399
>gi|77550763|gb|ABA93560.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1469
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ VL D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 372 LNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K II
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGII 464
>gi|154297479|ref|XP_001549166.1| predicted protein [Botryotinia fuckeliana B05.10]
gi|154320377|ref|XP_001559505.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 835
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVG 258
P++ + D+GST N + LA L+L I + +V + + + + G C V+ + GV
Sbjct: 711 PVNAIPDSGSTINLIDSVLARKLNLPISPVQTTIVGI-SADSLNLRGICRDVRVALGGVS 769
Query: 259 FEADFHILDFSRADAVLGVQWL 280
+ ++++ +R + +LG+ W
Sbjct: 770 NVINIYVMENARNELLLGMPWF 791
>gi|116310820|emb|CAH67609.1| OSIGBa0145G11.8 [Oryza sativa Indica Group]
Length = 1470
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 372 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|77551772|gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVGRYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRSPFLANL 728
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 729 ILLESKDLDVILGMDWLTKFKGVI 752
>gi|242217195|ref|XP_002474399.1| predicted protein [Postia placenta Mad-698-R]
gi|220726441|gb|EED80390.1| predicted protein [Postia placenta Mad-698-R]
Length = 1359
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + +N P L+DTGS +++ RLAH L + I EK + +AV G R++
Sbjct: 1142 PVVVVVDVNGHPARALLDTGSLADFMSARLAHQLGVKIFELEKPLPVHLAV-QGSRLKIN 1200
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C+ + + Q V + F +++ D +LG +L
Sbjct: 1201 FGCT-AQLQYQTVKSQRYFDVINLQNYDLILGTPFL 1235
>gi|21741860|emb|CAD41450.1| OSJNBa0019D11.8 [Oryza sativa Japonica Group]
Length = 1470
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 372 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|217073570|gb|ACJ85145.1| unknown [Medicago truncatula]
gi|388517775|gb|AFK46949.1| unknown [Medicago truncatula]
Length = 185
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHC 247
++ K+ N + VL+D+G+THN++ +L L L I + + +G+G + S+G C
Sbjct: 82 KIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLGDGHEVLSQGVC 139
>gi|357516397|ref|XP_003628487.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355522509|gb|AET02963.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 544
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGH-CSKVKFE 253
N+ PL +IDTG+TH ++ A+ L L + +V + + + C +
Sbjct: 329 FNSTPLIAIIDTGATHCFIAIECAYKLGLVLSYMKGEMVVETPAKGLVTTSLVCLRCPLS 388
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLE 281
M G FE D L + + + G+ WLE
Sbjct: 389 MFGRDFEVDLVCLPLTGMNVIFGMNWLE 416
>gi|15217199|gb|AAK92543.1|AC051624_1 Putative retroelement [Oryza sativa Japonica Group]
gi|31431042|gb|AAP52880.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1773
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVGRYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRSPFLANL 728
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 729 ILLESKDLDVILGMDWLTKFKGVI 752
>gi|395322954|gb|EJF55512.1| hypothetical protein DICSQDRAFT_38663, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 223
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE---KTMSFLVAVGNGERIRSE 244
P ++ +N+KP+ L+DTGS +++ + L L E K + +AV RS+
Sbjct: 21 PIVVTVYVNDKPVRALVDTGSMADFISTTVVDQLGLHKEILAKPLPVQLAVHGS---RSK 77
Query: 245 GHC-SKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
+C + V F+ QG+ + F +++ D +LG +L
Sbjct: 78 INCGTTVDFKYQGIDCKRRFDVVNLDNYDMILGTPFL 114
>gi|77553211|gb|ABA96007.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1197
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L EK + + G S + V E+
Sbjct: 295 VNSVPATVLFDSGATHSFISKKFVGMHGLRKEKLSTPMRVHTPGNSSTSVSYSPSVLIEI 354
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 355 QISPFLANLILLESKDLDVILGMDWLTKFKGVI 387
>gi|38346261|emb|CAE02083.2| OSJNBa0074B10.11 [Oryza sativa Japonica Group]
Length = 1243
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 110 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMWVHTPGNSSTSVQFSPSITIEI 169
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 170 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 202
>gi|347440725|emb|CCD33646.1| hypothetical protein [Botryotinia fuckeliana]
Length = 477
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 33/179 (18%)
Query: 136 RLNPLLPLPPPNPSNPPKIALPICRLTA----VEMQTR----------QEPSEILQEEEI 181
R+ LPPP ++ CR T ++ +TR +EP + E+EI
Sbjct: 212 RVQAQAILPPPVVGTVMRVTRGTCRYTLWKDLLDDKTRSGTNAVYLGEEEPRRVTLEDEI 271
Query: 182 LVE---DTVPKQLSA-----------KINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK 227
+ + QL+A KIN + +ID+G+T N++ P A +L + ++K
Sbjct: 272 TQNNENEQITPQLNATGQAGQIYCRVKINGQIQQAMIDSGATGNFIAPEAAKYLGVPLQK 331
Query: 228 TMS-FLVAVGNGERIRSEGHCSK----VKFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
+ + + + +G+ S+G+ S+ V+ M ++ + +LG+ WL+
Sbjct: 332 KQNPYQLQLVDGQLAGSDGNVSQETRPVRMNMTQHSEVIQLDVVPLGQQQIILGMPWLK 390
>gi|208609060|dbj|BAG72152.1| hypothetical protein [Lotus japonicus]
Length = 1369
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 7 QTRYRALEEQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLH 66
QT RA E +A+ RF P+ N L + Q SV Y+ FE + + N
Sbjct: 161 QTLERAWE---PFKQALFRRFQPALLQNPFGPLLSVKQKGSVMEYRENFELLAAPMRNAD 217
Query: 67 PDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDK 107
+ + F++GL+ I+ E+ ++ +L + + A L+E+K
Sbjct: 218 REVLKGVFLNGLQEEIKAEMKLYPADDLAELMDRALLLEEK 258
>gi|21672038|gb|AAM74400.1|AC119149_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 1300
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 16/144 (11%)
Query: 144 PPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVL 203
P P + P I + +A E QT E +V T P +N+ P +VL
Sbjct: 625 PKPRRAGPRFIQARVNHASAEEAQTAPE----------VVLGTFP------VNSIPATVL 668
Query: 204 IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADF 263
D+G+TH+++ + L E+ + + G S V E+Q F A+
Sbjct: 669 FDSGATHSFISKKFVGRYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEIQRSPFLANL 728
Query: 264 HILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL K +I
Sbjct: 729 ILLESKDLDVILGMDWLTKFKGVI 752
>gi|384491783|gb|EIE82979.1| hypothetical protein RO3G_07684 [Rhizopus delemar RA 99-880]
Length = 194
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Query: 23 IESRFGPS-SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPT 81
IE F PS S R L + Q+SSV Y F++I + N+ D LD F+ GLK
Sbjct: 86 IEYAFKPSYSQQAARDRLANVKQSSSVIEYVDAFQDILLDLPNISDDESLDRFVRGLKNN 145
Query: 82 IQNELAIHKPSNLRDAIALAKLIEDKLQ 109
++ + +P L +A A E Q
Sbjct: 146 VRTHVLTKEPRTLEEASKFAIAFESAQQ 173
>gi|62733260|gb|AAX95377.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62733997|gb|AAX96106.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550108|gb|ABA92905.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1261
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P +VL D+G+TH+++ + L E+ + + G S + V E+
Sbjct: 384 INSIPTTVLFDSGATHSFISKKFVGMHGLRKEEISTLMRVHTPGNSSTSISYSPSVLIEI 443
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
F A+ +L+ D +LG+ WL K +I
Sbjct: 444 HRSRFLANLILLESKDLDVILGMDWLTKFKGVI 476
>gi|38347369|emb|CAE04959.2| OSJNBa0070D17.10 [Oryza sativa Japonica Group]
Length = 730
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 47 SVEAYQSTFENICNRVTNLHP----DAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102
SVE Y FE + V HP ++ CFI GL+ I++++ HKP L ++ AK
Sbjct: 260 SVEQYIDKFEEYVDLVRRDHPYLQEQSLNSCFIGGLRGDIKHDVCGHKPQGLLESYWYAK 319
Query: 103 LIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLP 142
+ K + + +++W N P+ T N++ + P
Sbjct: 320 NYK-KAANARKVALNWN-KNKPLIHTGGNQSRANMTKAPP 357
>gi|54287551|gb|AAV31295.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1374
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 346 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 389
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G + S +C ++ F +
Sbjct: 390 LFDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQAFSTQYCPSATIGIEEDPFPSS 449
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 450 LILLESKDLDVILGMDWLSRHRGVI 474
>gi|395323794|gb|EJF56250.1| hypothetical protein DICSQDRAFT_175052 [Dichomitus squalens
LYAD-421 SS1]
Length = 352
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 152 PKIALPICRLTAVEMQTRQEPSE----ILQEEEILVEDTV-----PKQLSAKINNKPLSV 202
P+I+ PI L AV +TR S+ LQ D P + ++N +P
Sbjct: 102 PRISPPIP-LFAVRPKTRHAKSDNSLSALQRNAAAPRDFSRLIPEPVVVVVQVNEQPTRA 160
Query: 203 LIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGF 259
L+D+GS +++ RLAH L L + K + +AV G R + C + + E Q +
Sbjct: 161 LVDSGSLSDFMSARLAHQLGLEVFELTKPLPVQLAV-QGSRAKINFGC-RARLEYQRIRT 218
Query: 260 EADFHILDFSRADAVLGVQWL 280
E F +++ D +LG ++
Sbjct: 219 ERYFDVINLLNYDLILGTPFI 239
>gi|147860873|emb|CAN81056.1| hypothetical protein VITISV_033320 [Vitis vinifera]
Length = 997
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 120/310 (38%), Gaps = 35/310 (11%)
Query: 1 MTNEDMQTRYRALEEQAALTRAIESRFG-PSSYINHRATLFKLTQTSSVEAYQSTFENIC 59
M +D ++ + L R ++ +F ++ R L +L T SV Y F ++
Sbjct: 110 MMEDDAESGIPQITTWETLKRELKDQFLLTNTAWEAREVLKRLRHTGSVRDYAKEFNSLM 169
Query: 60 NRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQ------ 113
+ N+ + L F+S L+ +Q +L +L A+ A + K + +
Sbjct: 170 LDIKNMLEEDKLFNFMSRLQGWVQMKLRRQGVHDLPTAMVAANCLRPKSEGSKKTKAGAK 229
Query: 114 --KSISWKPTNT-------PIPTTTR--NETNIRLNPLLPLPPPNPSNPPKIALPICRLT 162
K WK N P+ TT+ +T + P + PK +T
Sbjct: 230 TSKKSGWKKHNKKAAVGGKPMEKTTKFVQQTTRVAGCFICNSPHRARDYPKREKLSALVT 289
Query: 163 A-------VEMQTRQEPSEILQEEEILVEDTVPKQLS-----AKINNKPLSVLIDTGSTH 210
A E R P + L ++ P Q S A +N + L+D+G+TH
Sbjct: 290 ADDNGESDSETPLRVNPLQFLN----VINGETPVQKSLMHVHAVVNGVQVKALMDSGATH 345
Query: 211 NYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSR 270
N++ R A L L +E+ S + A+ N + + +G V ++ + +
Sbjct: 346 NFVATRKATRLGLKLEEDTSRIKAI-NSKAQKIQGVAKNVPMQIGDWKGTCNLLCVPLDD 404
Query: 271 ADAVLGVQWL 280
D +LGV +L
Sbjct: 405 FDLILGVDFL 414
>gi|38344579|emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]
Length = 1251
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%)
Query: 202 VLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEA 261
L+D+GST+++++ A I + + + V G I S ++ + +QG FE
Sbjct: 330 ALVDSGSTNSFMNYDFAIKSGCEILEAGNRRILVAGGGMISSSTKTEQLSYTVQGHPFER 389
Query: 262 DFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
F ++ D +LG W+ I D K + T KG
Sbjct: 390 VFQLIPLKGFDVILGADWIYDHSPISLDLKQRVLWVTCKG 429
>gi|384499364|gb|EIE89855.1| hypothetical protein RO3G_14566 [Rhizopus delemar RA 99-880]
Length = 188
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 29 PSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAI 88
PSSY N R L + QT+SV Y F++I + + D LD F+ GLK ++ +
Sbjct: 38 PSSY-NARDRLASIKQTTSVSEYADAFQDILLDLPRVSDDEALDRFVRGLKNDVRIHVLT 96
Query: 89 HKPSNLRDA 97
+P +L +A
Sbjct: 97 KEPRSLEEA 105
>gi|21593259|gb|AAM65208.1| unknown [Arabidopsis thaliana]
Length = 272
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDC-FISGLKPTIQN 84
RFG R L L Q SV +Y FE++ + + D +L+ F+ GLK IQ
Sbjct: 182 RFGDPRSAMER--LLTLKQVDSVISYLGEFEDLSTQCLD-DLDTVLEVVFVKGLKEEIQE 238
Query: 85 ELAIHKPSNLRDAIALAKLIED 106
L + +P L D I +A+ +E+
Sbjct: 239 MLRVFQPKGLSDIIMMARRLEN 260
>gi|62734341|gb|AAX96450.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77549773|gb|ABA92570.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1723
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 606 VNSIPTTVLFDSGATHSFISKKFVGMYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 665
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 666 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 698
>gi|347828976|emb|CCD44673.1| hypothetical protein [Botryotinia fuckeliana]
Length = 278
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|116308982|emb|CAH66104.1| OSIGBa0101K10.3 [Oryza sativa Indica Group]
Length = 1521
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H + K +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLMRKELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|154304153|ref|XP_001552482.1| hypothetical protein BC1G_09712 [Botryotinia fuckeliana B05.10]
Length = 1302
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYCKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|147835239|emb|CAN67792.1| hypothetical protein VITISV_001313 [Vitis vinifera]
Length = 1414
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ A +N K L+DTG+THN++ A L L K +L AV + + S G V
Sbjct: 438 VEALVNGKATKALVDTGATHNFVAEDEARRLELQASKEGGWLKAVNSAAKP-SHGVARGV 496
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
+ DF + VLG+ +L+K+ +
Sbjct: 497 SMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAV 532
>gi|50878466|gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 143 LPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSV 202
+P PN SN P + + A E Q P +L T P +N+ P +V
Sbjct: 346 VPAPNNSNVPAPKARVNHVAAAEAQN--APDVVL--------GTFP------VNSIPATV 389
Query: 203 LIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEAD 262
L D+G+TH++L A + + L+ G + S +C ++ F +
Sbjct: 390 LFDSGATHSFLSKSFASNHGMEVISLGRPLLVNTPGNQAFSTQYCPSATIGIEEDPFPSS 449
Query: 263 FHILDFSRADAVLGVQWLEKLGKII 287
+L+ D +LG+ WL + +I
Sbjct: 450 LILLESKDLDVILGMDWLSRHRGVI 474
>gi|10946132|gb|AAG24792.1|AF264028_2 pol protein [Colletotrichum gloeosporioides]
Length = 1241
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCS 248
QL INN+ LID+GS +++ PR + L + EK + + GE+++ EG
Sbjct: 92 QLRVIINNQTAIALIDSGSEGDFVSPRAVNKLRIPWHEKRQPYQLNNVEGEQVQYEGGTI 151
Query: 249 K---VKFEMQGVGF--EADFHILDFSRADAVLGVQWLEK 282
K EM + + I + D VLG+ WLEK
Sbjct: 152 KNETAPLEMSYLDRNEQLQLDITNIGEYDLVLGMPWLEK 190
>gi|77552016|gb|ABA94813.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1712
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 713 INSTPVKVLFDSGASHSFISLKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPILL 772
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 773 RDVVFPSNLMVLIPQTLDVILGMDWLAKHTGVI 805
>gi|440634281|gb|ELR04200.1| hypothetical protein GMDG_06622 [Geomyces destructans 20631-21]
Length = 406
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELA-IHKPSNLRDAIAL 100
L Q S Y + F+ +TN +AI D F SGLK +++E++ KP +LR+ I L
Sbjct: 147 LKQRGSAVTYTAEFQQHAT-LTNWGDEAICDQFYSGLKDHVKDEISRSDKPDDLREMIEL 205
Query: 101 AKLIEDK 107
A+ I+++
Sbjct: 206 AQKIDNR 212
>gi|38346034|emb|CAD39763.2| OSJNBa0059D20.6 [Oryza sativa Japonica Group]
Length = 1470
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ VL D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 372 LNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|77555315|gb|ABA98111.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1407
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ VL D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 372 LNSTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEITVDTACINVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|440632165|gb|ELR02084.1| hypothetical protein GMDG_05244 [Geomyces destructans 20631-21]
Length = 361
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 42 LTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELA-IHKPSNLRDAIAL 100
L Q S AY + F+ +TN +AI D F +GLK +++E++ KP +LR+ I L
Sbjct: 130 LKQRGSAVAYTAEFQQHAT-LTNWGDEAICDQFYAGLKDHVKDEISRSDKPDDLREMIEL 188
Query: 101 AKLIEDK 107
A+ I+++
Sbjct: 189 AQKIDNQ 195
>gi|395324864|gb|EJF57296.1| hypothetical protein DICSQDRAFT_174059 [Dichomitus squalens
LYAD-421 SS1]
Length = 351
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P L+D+GS +++ RLAH L L + K + +AV G R +
Sbjct: 146 PVVVVVQVNEQPARALVDSGSLSDFMSARLAHQLGLEVFELTKPLPVQLAV-QGSRAKIN 204
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C +V+ E Q + E F +++ D +LG ++
Sbjct: 205 FGC-RVRLEYQRIRTERYFDVINLLNYDLILGTPFI 239
>gi|108862184|gb|ABA96442.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1539
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 48/93 (51%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + A L++ + + G + + +C + E+
Sbjct: 456 VNSYPATVLFDSGATHSFISKKFAGTHGLSVVELKIPMRVHTPGNDMNTAHYCPSMTIEI 515
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ F ++ +L+ D +LG+ WL + +I
Sbjct: 516 KRSPFLSNLILLESKDLDVILGMDWLTRHKGVI 548
>gi|444321434|ref|XP_004181373.1| hypothetical protein TBLA_0F03150, partial [Tetrapisispora blattae
CBS 6284]
gi|387514417|emb|CCH61854.1| hypothetical protein TBLA_0F03150, partial [Tetrapisispora blattae
CBS 6284]
Length = 257
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 18 ALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP------DAIL 71
A +A + +F I L LTQ +EAY STF NR L P D ++
Sbjct: 86 AFKQAFQGKFDSYDVIQ---KLSSLTQKDKIEAYVSTF----NRYRKLLPPRSLSNDVLI 138
Query: 72 DCFISGLKPTIQNELAIHKPSNLRDAIALA 101
+ FI GLKP + +L + S+ +A LA
Sbjct: 139 NLFIKGLKPNTRKDLRLRTVSSFYEATQLA 168
>gi|154289364|ref|XP_001545311.1| hypothetical protein BC1G_16148 [Botryotinia fuckeliana B05.10]
Length = 419
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|5042447|gb|AAD38284.1|AC007789_10 putative polyprotein [Oryza sativa Japonica Group]
Length = 1220
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+ H++++ + +H I + +S + V G S V E
Sbjct: 404 VNSIPATVLFDSGAMHSFIYKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSVTIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|395323031|gb|EJF55558.1| hypothetical protein DICSQDRAFT_73515, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 391
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHL---AIEKTMSFLVAVGNGERIRSEGHCSKVK 251
IN +P+ L+DTGS +++ +LAH L + + K M +AV G R + C+ +
Sbjct: 194 INGQPVRALLDTGSLADFMSAKLAHQLKVETFELVKPMPLHLAV-QGSRAKINYGCT-AQ 251
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
E Q + + F I++ D +LG + + HK LT
Sbjct: 252 VEYQSINAKRYFDIINLLNYDVILGTPFFFQ-------HKVLT 287
>gi|393242391|gb|EJD49909.1| hypothetical protein AURDEDRAFT_160931 [Auricularia delicata
TFB-10046 SS5]
Length = 1624
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 152 PKIALPICRLTAVEMQTRQ---EPSEILQEEEILVEDTV-----PKQLSAKINNKPLSVL 203
P I + R E+ +R+ EPSE L+ + V + P + A + + VL
Sbjct: 1417 PAITVGSSRPVGPEVGSRKKRSEPSEPLERTAMRVRRSARLVPRPVVVEALVQGRLTRVL 1476
Query: 204 IDTGSTHNYLHPRLAHFLHL---AIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE 260
ID+GS +++ LA L L A+E+ + +AV G R + S +F+ Q + E
Sbjct: 1477 IDSGSLADFMSTTLADQLKLPMNALERPIPVQLAV-KGSRSKINVEVS-ARFQYQDIDCE 1534
Query: 261 ADFHILDFSRADAVLGVQWL 280
F I + D +LG +L
Sbjct: 1535 KRFDIANLDNYDLILGTPFL 1554
>gi|62732819|gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550206|gb|ABA93003.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1436
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +L + ++ G I C V +
Sbjct: 372 INSTPVKVLFDSGASHSFISRKASQKHNLTLVGLRKPMIVHSPGGEITVSHACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLLVLIPQTLDVILGMDWLTKNRGVI 464
>gi|444318093|ref|XP_004179704.1| hypothetical protein TBLA_0C03840 [Tetrapisispora blattae CBS 6284]
gi|387512745|emb|CCH60185.1| hypothetical protein TBLA_0C03840 [Tetrapisispora blattae CBS 6284]
Length = 274
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 16 QAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHP------DA 69
+ A +A + +F I L LTQ +EAY STF NR L P D
Sbjct: 84 KEAFKQAFQGKFDSYDVIQ---KLSSLTQKDKIEAYVSTF----NRYRKLLPPRSLSNDV 136
Query: 70 ILDCFISGLKPTIQNELAIHKPSNLRDAIALA 101
+++ FI GLKP + +L + S+ +A LA
Sbjct: 137 LINLFIKGLKPNTRKDLRLRTVSSFYEATQLA 168
>gi|78708144|gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 441 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 499
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 500 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 533
>gi|77555413|gb|ABA98209.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 911
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G++++++ + A L++ + + G+ + + +C + E+
Sbjct: 248 VNSHPATVLFDSGASYSFISKKFAGTHGLSVVELKIPMRVHTPGDDMNTAHYCPSMSIEI 307
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298
+ F ++ +L+ D +LG+ WL + +I D+ + T+ T
Sbjct: 308 KRSQFLSNLILLESKDLDVILGMDWLTRHKGVI-DYASRTITLT 350
>gi|52353389|gb|AAU43957.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1263
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 50/112 (44%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
+L KI + +L+D+GS+ +++ +LA L V V NG+ + +
Sbjct: 469 RLQGKIQGLNILMLVDSGSSASFVSDQLADRLTGVQFLAHPLSVKVANGQVLHCQKEMPS 528
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++ + G F F ++ DA+LG+ WL K + D + ++ G
Sbjct: 529 AEWFVSGQKFLTTFKVVALGGYDAILGMDWLTKYSPMHIDWQLKSIHLIVMG 580
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDA----ILDCF 74
A+ +F + + L ++ QT SV + F+++ N++ P ++ F
Sbjct: 246 FCEAVNRKFDRNQHRQLIRQLDQIKQTGSVSEFYEWFDDLMNQLLTYDPMYNTLNLVHQF 305
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQK 114
I GL+ I+ + +H P +L A+ LA L++++L NQ+
Sbjct: 306 IEGLRFDIRKAVLLHCPKDLESALVLA-LLQEELSERNQE 344
>gi|77554637|gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1672
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
IN+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 594 INSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 652
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 653 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 686
>gi|224158034|ref|XP_002337925.1| predicted protein [Populus trichocarpa]
gi|222870020|gb|EEF07151.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 15 EQAALTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFE---NICNRVTNLHPDAI- 70
++ +RAI SRFG + I KL Q V+ Y FE ++ + + +L P++
Sbjct: 153 DEEEFSRAICSRFGNRTDIVEEFN--KLMQEGDVDEYVKRFEELKSLMHSLNSLLPESYY 210
Query: 71 LDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIED 106
+ FISGLK I+ L I KP L A AK E+
Sbjct: 211 ISSFISGLKEDIKPMLKILKPVTLMIAFDQAKWQEE 246
>gi|56155209|gb|AAV80394.1| polyprotein [Hordeum vulgare subsp. vulgare]
Length = 1486
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H++L A + +++ V G + S V +M
Sbjct: 388 VNDFPAKVLFDSGASHSFLSYPFAAKNDIHLQELARSFDIVSPGMLMSSRWFAPDVSIKM 447
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299
F A ++L S D +LG+ WL + K D +A ++ T+
Sbjct: 448 DNYAFLASPYVLGKSDIDLILGMDWL-AMNKASIDCEAKEVKMTH 491
>gi|19881618|gb|AAM01019.1|AC090488_19 Putative retroelement [Oryza sativa Japonica Group]
Length = 1475
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G+TH+++ + L EK + + G S + E+
Sbjct: 404 VNSIPAIVLFDSGATHSFISKKFVGMHGLIREKLSTPMRVHTPGNSSTSVQFSPSITIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|347839935|emb|CCD54507.1| hypothetical protein [Botryotinia fuckeliana]
Length = 680
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 52/122 (42%), Gaps = 4/122 (3%)
Query: 21 RAIESRFGPSSYIN-HRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLK 79
R I FG S+ + +F L QT S Y + F T AI+ + GLK
Sbjct: 102 RIIRRIFGNSNELEIAEDKIFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLK 160
Query: 80 PTIQNELAIHKPS-NLRDAIALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRL 137
P ++ EL S +L D I + +D+L Y Q S+KP N +NE R
Sbjct: 161 PEVRLELERSAESTDLNDLIQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRY 220
Query: 138 NP 139
NP
Sbjct: 221 NP 222
>gi|110288674|gb|ABB46871.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1446
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G+TH+++ + L EK + + G S + E+
Sbjct: 404 VNSIPAIVLFDSGATHSFISKKFVGMHGLIREKLSTPMRVHTPGNSSTSVQFSPSITIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|116310689|emb|CAH67488.1| H0306B06.3 [Oryza sativa Indica Group]
Length = 1510
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|32487925|emb|CAE05273.1| OSJNBb0014D23.7 [Oryza sativa Japonica Group]
Length = 302
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 40 FKLTQTSSVEAYQSTFENICNRV----TNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
F + Q SSV Y F+ I +++ ++L + + F+ GLKP I++ + + KP +L
Sbjct: 212 FHIAQDSSVSEYVEKFDGIMHQLLAYSSSLPLNYFVTKFVEGLKPAIRSGVLMQKPQDLD 271
Query: 96 DAIALAKLIEDKLQ-SYNQKSI 116
A +LA L E+ L+ S + +SI
Sbjct: 272 SACSLALLQEEILEGSCSARSI 293
>gi|449526824|ref|XP_004170413.1| PREDICTED: uncharacterized protein LOC101223971 [Cucumis sativus]
Length = 316
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 27 FGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNEL 86
F S + A L ++ Q S Y F + ++ + D F++GL+P +Q E+
Sbjct: 202 FKDSGQTSLVARLIRIQQDGSYSEYVKKFVTYSAPLPHMEESVLRDAFLTGLEPNLQAEV 261
Query: 87 AIHKPSNLRDAIALAKLIEDK 107
P L D + AKL+ D+
Sbjct: 262 VSRFPRTLEDCMREAKLVNDR 282
>gi|77555641|gb|ABA98437.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1825
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 708 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEI 767
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 768 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 800
>gi|86371679|gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 119 KPTNTPIPTTTRNETNIRLNP-------LLPLPPPNPSNPPKIALPICRLTAVEMQTRQE 171
KP NTP+ T N T +R P L P PN + ++ V + QE
Sbjct: 305 KPRNTPVRTGA-NVTPVRGTPTPAAGRGLFRTPLPNEA---ATGFRRGQVNHVRAEEAQE 360
Query: 172 PSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLA--HFLH-LAIEKT 228
+L IN+ + VL D+G++H+++ +++ H LH +A+++
Sbjct: 361 DQSVLMG-------------MFSINSTLVKVLFDSGASHSFISSQVSKQHHLHQVALKRP 407
Query: 229 MSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
M LV G+ I C V ++ V F ++ +L D +LG+ WL K II
Sbjct: 408 M--LVHSPGGD-ITVPHACINVPIRIRDVVFLSNLMVLSPQTIDVILGMDWLTKNNGII 463
>gi|77555408|gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1521
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|4235644|gb|AAD13304.1| polyprotein [Solanum lycopersicum]
Length = 1542
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 19 LTRAIESRFGPS--SYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFIS 76
L + + +F PS S++ R L +L QT SV Y F ++ + N+ + L FIS
Sbjct: 185 LIKEMRDQFLPSNASWLA-RDKLKRLRQTGSVREYIKEFTSVMLDIQNMSDEDKLHNFIS 243
Query: 77 GLKPTIQNELAIHKPSNLRDAIALAKLIED 106
G++ QNEL +L AIA A + D
Sbjct: 244 GMQGWAQNELRRQNVKDLPGAIAAADSLVD 273
>gi|347441756|emb|CCD34677.1| hypothetical protein [Botryotinia fuckeliana]
Length = 697
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|38346551|emb|CAE02128.2| OSJNBa0035M09.12 [Oryza sativa Japonica Group]
Length = 1435
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|15217306|gb|AAK92650.1|AC079634_11 Putative retroelement [Oryza sativa Japonica Group]
gi|31431383|gb|AAP53171.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1109
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 240 VNSIPATVLFDSGATHSFISKKFVGMHGLVREELSTPMRVHTPGNSSTSVQFSPSITIEI 299
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 300 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 332
>gi|154311590|ref|XP_001555124.1| hypothetical protein BC1G_06254 [Botryotinia fuckeliana B05.10]
Length = 1190
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|358343690|ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355501866|gb|AES83069.1| Cellular nucleic acid-binding protein [Medicago truncatula]
Length = 558
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 199 PLSVLIDTGSTHNYLHPRLAHFLHLAI-EKTMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257
PL +IDTG+TH ++ A+ L L I + +V + + C M G
Sbjct: 365 PLIAIIDTGATHCFIAVDCAYKLGLVISDMNGEMVVETPAKGSLTTSLVCLSCPLSMFGR 424
Query: 258 GFEADFHILDFSRADAVLGVQWLE 281
FE D L + D + G+ WLE
Sbjct: 425 DFEVDLVCLPLTGMDVIFGMNWLE 448
>gi|53981359|gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1850
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 636 VNSIPATVLFDSGATHSFVSKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 695
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 696 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 728
>gi|77554722|gb|ABA97518.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1524
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 593 VNSIPATVLFDSGATHSFISMKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFIPSVLIEI 652
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 653 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 685
>gi|53981942|gb|AAV25060.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53982137|gb|AAV25233.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1765
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 660 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 718
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 719 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 752
>gi|77555816|gb|ABA98612.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1775
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 712 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 770
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 771 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 804
>gi|116309023|emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group]
Length = 1510
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 393 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 451
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 452 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 485
>gi|147810924|emb|CAN71786.1| hypothetical protein VITISV_031912 [Vitis vinifera]
Length = 852
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ A +N K L+DTG+T+N++ A L L K ++L AV + + S G KV
Sbjct: 216 VEALVNGKATKALMDTGATYNFVSEDEAKRLELQASKEGAWLKAVNSAAKP-SHGVARKV 274
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
+ DF + VLG+ +L+K+ +
Sbjct: 275 TMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAV 310
>gi|77554821|gb|ABA97617.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1243
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 462
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 463 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|384487333|gb|EIE79513.1| hypothetical protein RO3G_04218 [Rhizopus delemar RA 99-880]
Length = 453
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQTALGVIYDVPIEVQEDLIIPCTVEVLPACPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|357450377|ref|XP_003595465.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
gi|355484513|gb|AES65716.1| hypothetical protein MTR_2g048010 [Medicago truncatula]
Length = 468
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV----AVGNGERIRSEGHCSKV 250
N+ PL +IDTG+TH ++ A+ L L + +V A G+ + + C +
Sbjct: 208 FNSTPLIAIIDTGATHCFIAIECAYKLGLDVSDMKGEMVVETPAKGS---VTTSLVCLRC 264
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G F D L + D + G+ WLE
Sbjct: 265 PISMFGRDFVIDLVCLPLTGMDVIFGMNWLE 295
>gi|20042987|gb|AAM08795.1|AC090486_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431148|gb|AAP52970.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1785
Score = 40.8 bits (94), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 668 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 726
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 727 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 760
>gi|54291836|gb|AAV32204.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1142
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 178 VNSIPATVLFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 237
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 238 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 270
>gi|116309867|emb|CAH66904.1| H0823A09.5 [Oryza sativa Indica Group]
Length = 1716
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 668 VNSIPATVLFDSGATHSFISTKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 726
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 727 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 760
>gi|21672035|gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 1512
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 358 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 416
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 417 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 450
>gi|15217244|gb|AAK92588.1|AC074354_22 Putative retroelement [Oryza sativa Japonica Group]
gi|19881702|gb|AAM01103.1|AC098682_7 Putative retroelement [Oryza sativa Japonica Group]
gi|31431123|gb|AAP52945.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 660 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 718
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 719 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 752
>gi|15217216|gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431025|gb|AAP52863.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1714
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 597 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 655
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 656 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 689
>gi|77554454|gb|ABA97250.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 386 VNSIPATVLFDSGATHSFISKKFVGMHGLIREEPSTPMRVHTPGNSSTSVQFSPSITIEI 445
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 446 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 478
>gi|154289451|ref|XP_001545345.1| hypothetical protein BC1G_16168 [Botryotinia fuckeliana B05.10]
Length = 805
Score = 40.8 bits (94), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|62701906|gb|AAX92979.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1074
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N P+ VL D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 360 LNFTPVKVLFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 419
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 420 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 452
>gi|154290728|ref|XP_001545955.1| hypothetical protein BC1G_15283 [Botryotinia fuckeliana B05.10]
Length = 738
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 160 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 218
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 219 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 261
>gi|62733086|gb|AAX95203.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1566
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 711 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEI 770
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 771 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 803
>gi|154315671|ref|XP_001557158.1| hypothetical protein BC1G_04408 [Botryotinia fuckeliana B05.10]
Length = 1302
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|116309100|emb|CAH66206.1| OSIGBa0096F13.1 [Oryza sativa Indica Group]
Length = 1827
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S V E+
Sbjct: 710 VNSIPATVLFDSGATHSFISKKFVGMYGLRKDELSTPMRVRTPGNSSTSVSFSPSVLIEI 769
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 770 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 802
>gi|62734487|gb|AAX96596.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|108864323|gb|ABA93205.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1255
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+ ++H+++ L +E+ + L+ G + ++ + V E+
Sbjct: 182 IHSIPATILFDSKASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 241
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D LD D +L + WL + ++
Sbjct: 242 QGIPFPSDLIPLDTKYLDVILEMNWLAQFQGVV 274
>gi|38344376|emb|CAD41428.2| OSJNBb0032E06.10 [Oryza sativa Japonica Group]
Length = 2120
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 644 VNSIPATVLFDSGATHSFISKKFVG-MHGFIREELSTPMRVHTPGNSSTSVQFSPSITIE 702
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 703 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 736
>gi|108864175|gb|ABG22421.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1572
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 711 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEI 770
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 771 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 803
>gi|77554298|gb|ABA97094.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 676
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +V+ D+G+TH+++ + L E+ + + G S + E+
Sbjct: 178 VNSIPATVIFDSGATHSFISKKFVGMHGLVREELSTPMRVHTPGNSSTSVQFSPSITIEI 237
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 238 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 270
>gi|116310873|emb|CAH67814.1| OSIGBa0138H21-OSIGBa0138E01.5 [Oryza sativa Indica Group]
Length = 1777
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S V E+
Sbjct: 660 VNSIPATVLFDSGATHSFISKKFVGRYGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 719
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 720 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 752
>gi|116309082|emb|CAH66190.1| OSIGBa0144J05.2 [Oryza sativa Indica Group]
Length = 1827
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S V E+
Sbjct: 710 VNSIPATVLFDSGATHSFISKKFVGMYGLRKDELSTPMRVRTPGNSSTSVSFSPSVLIEI 769
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 770 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 802
>gi|168060564|ref|XP_001782265.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666278|gb|EDQ52937.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 442
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 45 TSSVEAYQSTFENICNRVTN--LHPDAILDCFISGL-KPTIQNELAIHKPSNLRDAIALA 101
T + AY F+ +C+R + LH I D F+ GL + ++ E+ +H+P L AI +A
Sbjct: 18 TEEISAYVRHFKEVCSRFVDDLLHDTTIRDYFLKGLDRSSVSQEIWMHRPQTLDHAIRVA 77
Query: 102 KLI 104
I
Sbjct: 78 LFI 80
>gi|154304358|ref|XP_001552584.1| hypothetical protein BC1G_08449 [Botryotinia fuckeliana B05.10]
Length = 1302
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|21742760|emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group]
Length = 1827
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S V E+
Sbjct: 710 VNSIPATVLFDSGATHSFISKKFVGMYGLRKDELSTPMRVRTPGNSSTSVSFSPSVLIEI 769
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 770 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 802
>gi|77555663|gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ VL D+G+ H+++ + + +L K ++ G I + C V +
Sbjct: 372 LNSTPIKVLFDSGALHSFISLKASQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|154309276|ref|XP_001553972.1| hypothetical protein BC1G_07532 [Botryotinia fuckeliana B05.10]
Length = 1302
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|326430057|gb|EGD75627.1| hypothetical protein PTSG_12471 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 10/137 (7%)
Query: 19 LTRAIESRF-GPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
L I RF PS + L + QT V+AY F + ++++ +L ++ G
Sbjct: 69 LVNKIVDRFHNPSRQLQLVFELRAIRQTKDVQAYNGDFNRVADQLSERSEVFLLAFYLMG 128
Query: 78 LKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKSISW-KPTNTPIPTTTRNETNIR 136
L PTI+ +++ PS L A+ K+ ED Q+ + + + T+ T++ + N +
Sbjct: 129 LHPTIRQVVSVASPSTLVQAM---KIAEDADQAKDVSGTHFARRTSVSSSGTSKYQANKQ 185
Query: 137 L-----NPLLPLPPPNP 148
P LPP P
Sbjct: 186 APRRDDGPRKRLPPLTP 202
>gi|154304964|ref|XP_001552885.1| hypothetical protein BC1G_08572 [Botryotinia fuckeliana B05.10]
Length = 1308
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|62733379|gb|AAX95496.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62734607|gb|AAX96716.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550242|gb|ABA93039.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 592
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L ++ + + G S + V E+
Sbjct: 239 VNSVPATVLFDSGATHSFISKKFVGMYGLRKKELSTPMKVHTPGNSSTSVSYSPSVLIEI 298
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 299 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 331
>gi|384501800|gb|EIE92291.1| hypothetical protein RO3G_17162 [Rhizopus delemar RA 99-880]
Length = 556
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 6/178 (3%)
Query: 125 IPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVE 184
I + + +I + L+ + PP P R + Q Q+ ++++EEI
Sbjct: 40 ISDVLKQKADIEIGDLITVAPPLRKKLVDECRP-KRKSRQSQQVAQQTMALIEDEEI--- 95
Query: 185 DTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
+T + I +K + L+D+G++ + LA L L I+ + +GNG + +
Sbjct: 96 NTTAAYSTVSIGDKNIKALVDSGASKTCMSKALADALELEIDSASENVFTLGNGTKQPAL 155
Query: 245 GHCSKVKFEM-QGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
G V E+ + + +L + +LG WL + K D + +++ YK
Sbjct: 156 GLIYDVPIEVKEDMVIPCTIEVLPSCPSHLILGSNWLNR-AKAKIDFNSSSLKVKYKN 212
>gi|147772919|emb|CAN64786.1| hypothetical protein VITISV_014071 [Vitis vinifera]
Length = 1217
Score = 40.4 bits (93), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ A +N K L+DTG+THN++ A L L K +L AV N S G V
Sbjct: 137 VEAIVNGKATKALVDTGATHNFVSEDEARRLELQASKEGGWLKAV-NSTAKPSHGVARGV 195
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
+ DF + VLG+ +L+K+ +
Sbjct: 196 TMHIGSWEGRVDFTVAPMDDFKMVLGMDFLQKVKAV 231
>gi|391331568|ref|XP_003740216.1| PREDICTED: uncharacterized protein K02A2.6-like [Metaseiulus
occidentalis]
Length = 429
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFL-HLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
+ KIN P+ + +DTG+ + + R L + +EKT L V NG +++S+G +
Sbjct: 311 TVKINGVPVIMAVDTGAEVSLIDRRTYEQLGNPTLEKTTQNLT-VANGSKLKSDG-ILQC 368
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEK--LGKII 287
+ E++G F + D ++LG+ WL K GKI+
Sbjct: 369 QIELEGTSFTGKCFVTDKC---SLLGLDWLRKDPHGKIL 404
>gi|62734534|gb|AAX96643.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
Length = 1643
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 145 PPNPSNPPKIALPICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLI 204
PP+P+N K TR + + E+ + D + I++ P ++L
Sbjct: 564 PPHPNNGGKDV------------TRGRVNHVTAEDVLTTPDIIVGTFL--IHSIPATILF 609
Query: 205 DTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFH 264
D+ ++H+++ L +E+ + L+ G + ++ + V E+QG+ F +D
Sbjct: 610 DSKASHSFISVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEIQGIPFPSDLI 669
Query: 265 ILDFSRADAVLGVQWLEKLGKII 287
LD D +L + WL + ++
Sbjct: 670 PLDTKYLDVILEMNWLAQFQGVV 692
>gi|384483814|gb|EIE75994.1| hypothetical protein RO3G_00698 [Rhizopus delemar RA 99-880]
Length = 610
Score = 40.4 bits (93), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER--IRSEGHCSKVKF 252
I P LIDTG++ NY+HPRL + + + + ++ V NGE+ I + C+ ++
Sbjct: 51 IKGVPYQALIDTGASANYIHPRLLNVVD-SYKPVINQAVETANGEQTVISGQAICT-MEI 108
Query: 253 EMQGVGFEADFHILDF-SRADAVLGVQWLEKL 283
+ + F F S+ D +LG WL+++
Sbjct: 109 KGRSKNFINIVKAFVFESKFDIILGNSWLKQI 140
>gi|384494732|gb|EIE85223.1| hypothetical protein RO3G_09933 [Rhizopus delemar RA 99-880]
Length = 445
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPACPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|108709317|gb|ABF97112.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 566
Score = 40.4 bits (93), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
IN+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 260 INSIPATVLFDSGATHSFISKKFIG-MHGLIREELSTPMRVHTLGNSSTSVQFSPSITIE 318
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ + + D +LG+ WL K +I
Sbjct: 319 IQRSPFLANLILFESKDLDVILGMDWLTKFKGVI 352
>gi|384485952|gb|EIE78132.1| hypothetical protein RO3G_02836 [Rhizopus delemar RA 99-880]
Length = 453
Score = 40.4 bits (93), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPACPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|384486220|gb|EIE78400.1| hypothetical protein RO3G_03104 [Rhizopus delemar RA 99-880]
Length = 453
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPACPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|384500082|gb|EIE90573.1| hypothetical protein RO3G_15284 [Rhizopus delemar RA 99-880]
gi|384500932|gb|EIE91423.1| hypothetical protein RO3G_16134 [Rhizopus delemar RA 99-880]
Length = 453
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPACPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|357503811|ref|XP_003622194.1| Cellular nucleic acid-binding protein-like protein, partial
[Medicago truncatula]
gi|355497209|gb|AES78412.1| Cellular nucleic acid-binding protein-like protein, partial
[Medicago truncatula]
Length = 509
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 17/96 (17%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERI---RSEGH----- 246
++ PL V+IDTG+TH ++ A L LA+ NGE + +++G
Sbjct: 362 FDSTPLVVIIDTGATHCFIAIDCAIKLGLAMSNI--------NGEMVVETQAKGFVTTSL 413
Query: 247 -CSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
CS+ M FE D L FS D + + WLE
Sbjct: 414 VCSRCPLSMFDHDFEIDLVCLPFSGMDVIPSMNWLE 449
>gi|54291804|gb|AAV32173.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1632
Score = 40.4 bits (93), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS-KVKF- 252
+N+ P +VL D+G+TH+++ + +H I + +S + R+ + G+ S V+F
Sbjct: 692 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPM------RVHTPGNSSTSVQFS 744
Query: 253 -----EMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
E+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 745 PSRTIEIQRSTFLANLILLESKDLDVILGMDWLTKFKGVI 784
>gi|395322781|gb|EJF55425.1| hypothetical protein DICSQDRAFT_41775, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 246
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P LID+GS +++ RLAH L + + K + +AV G R +
Sbjct: 19 PVVVVVQVNEQPARALIDSGSLSDFMSARLAHQLGINVFELTKPLPVQLAV-QGSRAKIN 77
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C + + E Q + E F +++ D +LG ++
Sbjct: 78 FGC-RARLEYQRIRTERYFDVINLLNYDLILGTPFI 112
>gi|427779291|gb|JAA55097.1| Putative tick transposon [Rhipicephalus pulchellus]
Length = 1155
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 178 EEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFL-HLAIEKTMSFLVAVG 236
+E+ E TV L+ I+ ++ L+DTG+ + + RLA L + E T ++ G
Sbjct: 75 DEQDSAEKTVTADLAVTIDGLEMTALVDTGADFSIMTERLADELKKVRTEWTGPYIRNAG 134
Query: 237 NGERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
G+ + G C+ + + V F A F IL +LG+ +L + G ++
Sbjct: 135 -GQIMTPTGKCT-ARLTIGDVAFVATFVILPECCKHLILGMDFLREYGAVV 183
>gi|18542904|gb|AAL75746.1|AC091724_19 Putative polyprotein [Oryza sativa Japonica Group]
gi|31430267|gb|AAP52207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1322
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + ++ G IR+ +V +
Sbjct: 355 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSPGRNIRATQIYPEVNLRI 414
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
+ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 415 EEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 457
>gi|32487715|emb|CAE05392.1| OSJNBa0022F16.16 [Oryza sativa Japonica Group]
Length = 1402
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL+D+G++H+++ + +L + ++ G + C V +
Sbjct: 307 INSTPVKVLLDSGASHSFISLEASQQHNLTLVGVRKPMIVHSPGGEVTVSHACIDVPIHL 366
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K II
Sbjct: 367 RDVVFPSNLMVLIPQTLDIILGMDWLTKNKGII 399
>gi|9967511|emb|CAC05636.1| putative protein [Arabidopsis thaliana]
Length = 221
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L L +T +E Y + FE+IC RV L D ++ +++GLK Q + + +P ++
Sbjct: 152 AKLKLLQETEGIEVYHARFESICTRV-KLDEDFLVSLYLTGLKTDTQVNIRMFQPQTIQQ 210
Query: 97 AIALAKL 103
L +
Sbjct: 211 CFNLRRF 217
>gi|116311087|emb|CAH68016.1| H0807C06-H0308C08.3 [Oryza sativa Indica Group]
Length = 1521
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHIPGNSSTSVQFSPSITIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|154296535|ref|XP_001548698.1| hypothetical protein BC1G_12842 [Botryotinia fuckeliana B05.10]
Length = 1618
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|154290730|ref|XP_001545956.1| hypothetical protein BC1G_15284 [Botryotinia fuckeliana B05.10]
Length = 1618
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|357510711|ref|XP_003625644.1| Serine carboxypeptidase [Medicago truncatula]
gi|355500659|gb|AES81862.1| Serine carboxypeptidase [Medicago truncatula]
Length = 712
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLV----AVGNGERIRSEGHCSKV 250
N+ PL +IDTG+TH ++ A+ L L I +V A G+ + + C +
Sbjct: 426 FNSTPLIAIIDTGATHCFIAIECAYKLGLDISDMKGEMVVETPAKGS---VTTSLVCLRC 482
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLE 281
M G F D L + D + G+ WLE
Sbjct: 483 PISMFGRDFVIDLVCLPLTGMDVIFGMNWLE 513
>gi|53981941|gb|AAV25059.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53982136|gb|AAV25232.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1777
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 660 VNSIPATVLFDSGATHSFISKKFLG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 718
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 719 IQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 752
>gi|242794481|ref|XP_002482383.1| retrotransposon polyprotein, putative [Talaromyces stipitatus ATCC
10500]
gi|218718971|gb|EED18391.1| retrotransposon polyprotein, putative [Talaromyces stipitatus ATCC
10500]
Length = 1697
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 34 NHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNEL-AIHKPS 92
N L +L QT S F+ I + + D ++ F + LK +Q EL + +P
Sbjct: 138 NAERQLRQLRQTGSARQLAIKFKQIA-MILDYSDDVLIAMFENMLKEDVQVELIKMDRPD 196
Query: 93 NLRDAIALAKLIEDKLQSYNQKS---ISWKPTNTPIPTTTR-----NETNIRLNPLLPLP 144
N+ + I A I+DKL QK W+ T +P R N R +P P+P
Sbjct: 197 NIDEFIEQAVKIDDKLYEIKQKRQEIQGWRRHGTALPANQRRHRSGNHGQRRHDPYGPMP 256
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVG-NGERIRSEGHCS 248
+++A I + ++ID+G+T NY+ PR L + K + + +G NGE++ EG
Sbjct: 578 KITANILGSDVRIMIDSGATGNYMDPRTQEKLQILGRKKPTPIPLIGLNGEKLSEEG--- 634
Query: 249 KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITD 289
+ E + D H+ + A LG E G++I +
Sbjct: 635 -ITDETGWLAMSIDGHLEMINFDIAKLGRDDDETKGRVIAE 674
>gi|19881569|gb|AAM00970.1|AC021892_34 Putative retroelement [Oryza sativa Japonica Group]
gi|78708151|gb|ABB47126.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1425
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+G+TH+++ + L E+ + + G S V E+
Sbjct: 365 VNSIPATILFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 424
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 425 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 457
>gi|384494287|gb|EIE84778.1| hypothetical protein RO3G_09488 [Rhizopus delemar RA 99-880]
Length = 870
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
Q Q+ ++++EEI +T + I +K + L+D+G++ + LA L L I+
Sbjct: 81 QVAQQTMALIEDEEI---NTTAAYSTVSIGDKNIKALVDSGASKTCMSKALADALELEID 137
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEM-QGVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+ + + +L + +LG WL + K
Sbjct: 138 SASENVFTLGNGTKQPALGLIYDVPIEVKEDMVIPCTIEVLPSCPSHLILGSNWLNR-AK 196
Query: 286 IITDHKALTMEFTYK 300
D + +++ YK
Sbjct: 197 AKIDFNSSSLKVKYK 211
>gi|21672026|gb|AAM74388.1|AC119149_3 Putative retroelement [Oryza sativa Japonica Group]
Length = 1458
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+G+TH+++ + L E+ + + G S V E+
Sbjct: 398 VNSIPATILFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 457
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 458 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 490
>gi|449460756|ref|XP_004148111.1| PREDICTED: uncharacterized protein LOC101204313 [Cucumis sativus]
Length = 501
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 15/145 (10%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S Y F N + ++ + D F++GL+P +Q E+ P L +
Sbjct: 166 ARLIRIEQDGSYNDYVKKFVNYSAPLPHMTESVLRDAFLTGLEPNLQAEVVSRNPLTLEE 225
Query: 97 AIALAKLIEDK---LQ---------SYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLP 144
+ A+L+ D+ LQ +Y + S TN + T PL +
Sbjct: 226 CMREAQLVNDRNLALQWSKAEGGGRNYKKGEGS---TNKGPEGGEKGITRKTEFPLKQVT 282
Query: 145 PPNPSNPPKIALPICRLTAVEMQTR 169
P N K P+ RL+ E + R
Sbjct: 283 IPIKGNYQKSEPPVKRLSDAEFRAR 307
>gi|154289800|ref|XP_001545506.1| hypothetical protein BC1G_15972 [Botryotinia fuckeliana B05.10]
Length = 1617
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|108708778|gb|ABF96573.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1481
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE 239
L A +++K L +L+D+GS+H+++ AH L L ++ S LV V NG+
Sbjct: 849 LRALVHSKVLLLLVDSGSSHSFIDYNFAHMLGLPLKPIPSTLVKVANGD 897
>gi|108862183|gb|ABA96440.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1652
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L D+G+TH+++ + L E+ + + G S V E+
Sbjct: 650 VNSIPATILFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSFSPSVLIEI 709
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 710 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 742
>gi|154295288|ref|XP_001548080.1| hypothetical protein BC1G_13225 [Botryotinia fuckeliana B05.10]
Length = 1296
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDA 97
+F L QT S Y + F T AI+ + GLKP ++ EL S +L D
Sbjct: 138 IFNLKQTGSALKYATEFRRYAG-TTKWDEIAIMSHYRKGLKPEVRLELERSAESTDLNDL 196
Query: 98 IALAKLIEDKLQSYNQKSISWKPT-NTPIPTTTRNETNIRLNP 139
I + +D+L Y Q S+KP N +NE R NP
Sbjct: 197 IQDSIESDDRLYRYRQSQRSYKPQGNQKQGRYRKNEGRPRYNP 239
>gi|77552304|gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1651
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 238 GERIRSEGHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
G IR++ C KV ++GV F A +LD D +LG+ WL K G+I + +T++
Sbjct: 657 GRDIRADKLCPKVDLVIEGVSFAAKPIVLDSQGLDVILGMDWLVKHKGQIDCAERTITLQ 716
>gi|38567682|emb|CAE75972.1| B1160F02.3 [Oryza sativa Japonica Group]
Length = 1430
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D G+TH+++ + L E+ + + G S + E+
Sbjct: 559 VNSIPTIVLFDYGATHSFISKKFVRMHGLVREELSTPMWVHTPGNSSTSVQFSPSITIEI 618
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 619 QRSSFLANLILLESKDLDVILGMDWLTKFKGVI 651
>gi|384485056|gb|EIE77236.1| hypothetical protein RO3G_01940 [Rhizopus delemar RA 99-880]
Length = 439
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
+T +E +++E++I K I +K + VL+D G+ + LA L L I+
Sbjct: 80 ETSKETMAVIEEDDIHTTAVYSK---INIGDKTVKVLVDCGAAKTCMSKSLADALGLEID 136
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEMQ-GVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+Q + +L ++G WL + K
Sbjct: 137 AASESVFTLGNGSKQPALGVIYDVPIEVQEDLIIPCTVEVLPTCPTHLIIGNNWLNR-AK 195
Query: 286 IITDHKALTMEFTYK 300
D + T++ +YK
Sbjct: 196 AKIDFNSSTLKVSYK 210
>gi|11994678|dbj|BAB02916.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I+ + V+ID+G+T+N++ LA L L T V +G + I++ G C + +
Sbjct: 233 ISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCFGINLLV 292
Query: 255 QGVGFEADFHILDFSR--ADAVLGV--------QWL 280
Q V +F +LD ++ D +LG QWL
Sbjct: 293 QEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWL 328
>gi|320031435|gb|EFW13399.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 666
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN + L VLIDTGS N L + L L +E + + V GE C +V ++
Sbjct: 203 INQQELMVLIDTGSEINLLSQKYTEMLKLPMENKLQVTMVVQTGEVTPFYTFCDEVPVQI 262
Query: 255 QGVGFEADFHILDFSRADA--VLGVQW 279
+ F I F R D +LG W
Sbjct: 263 GDIVTHTPFLI--FKRGDQQLILGRPW 287
>gi|395324043|gb|EJF56492.1| hypothetical protein DICSQDRAFT_41487, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 389
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P L+D+GS +++ RLAH L L + K + +AV G R +
Sbjct: 185 PVVVVVQVNEQPARALVDSGSLSDFMSARLAHQLGLEVFELTKPLPVQLAV-QGSRAKIN 243
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C + + E Q + E F +++ D +LG ++
Sbjct: 244 FGC-RARLEYQRIRTERYFDVINLLNYDLILGTPFI 278
>gi|348679642|gb|EGZ19458.1| hypothetical protein PHYSODRAFT_495032 [Phytophthora sojae]
Length = 271
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILD---CFISGLKPTIQNELAIHKPS 92
R L +L Q + +E Y + + RV + ++LD C+ +GLKP ++ + + P
Sbjct: 115 REKLQRLKQAADIETYNGEYSALIFRVEGM---SVLDQVLCYANGLKPRTRSYVKLENPQ 171
Query: 93 NLRDAIALA 101
L DA+ LA
Sbjct: 172 TLSDAMDLA 180
>gi|108709307|gb|ABF97102.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 2985
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 193 AKINNKPLSVLIDTGS--THNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKV 250
A ++P S GS ++N+ R+ H + ++ G IR+ C +V
Sbjct: 2063 AAAQSRPSSQASGQGSRASNNFGRGRVNHIQAETAQDAPDIVMVHSPGRNIRATQICPEV 2122
Query: 251 KFEMQGVGFEADFHILDFSRADAVLGVQWLEK-LGKIITDHKALTME 296
++ V F A +LD D +LG+ WL K G+I K++T++
Sbjct: 2123 NLRIEEVDFLAKPIVLDSQSLDIILGMDWLAKHKGQIDCAEKSITLQ 2169
>gi|125556203|gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indica Group]
gi|125597977|gb|EAZ37757.1| hypothetical protein OsJ_22094 [Oryza sativa Japonica Group]
Length = 310
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 26 RFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVT----NLHPDAILDCFISGLKPT 81
RF S + T L Q SSVE Y FE I V NL+ + LD FISGLK
Sbjct: 186 RFAAKSKVEITDTFRNLKQYSSVETYIDKFEEIMPLVKRNNPNLNEEYFLDYFISGLKEH 245
Query: 82 IQ---NELAIH 89
I+ + IH
Sbjct: 246 IKRPLKSMGIH 256
>gi|326435848|gb|EGD81418.1| hypothetical protein PTSG_11842 [Salpingoeca sp. ATCC 50818]
Length = 390
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
R L +L Q +V+ Y F + ++ ++ ++ FI GL+P + E++ H P L
Sbjct: 131 RDQLRRLRQDGNVQDYVFKFRQLMVQIDDMSRLDRIEAFIHGLRPRTRQEVSFHGPDTLE 190
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTP 124
A LA + + N P P
Sbjct: 191 QAYQLASRYDRNYTTANSAYRRGAPPTQP 219
>gi|384485045|gb|EIE77225.1| hypothetical protein RO3G_01929 [Rhizopus delemar RA 99-880]
Length = 344
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I NKP+ LID G+ + +LA L L I+ + + + NG + + G V E+
Sbjct: 217 IANKPIRALIDCGAAKTCISKKLADELGLKIDASSESVFTLRNGTKQPALGVIYDVPVEV 276
Query: 255 Q-GVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
+ + +L ++G WL + K D +++ TYK
Sbjct: 277 KRNMIIPCTIEVLPICPNQLIIGNNWLSR-AKAKIDFSNSSLKVTYK 322
>gi|240255473|ref|NP_189700.4| aspartyl protease family protein [Arabidopsis thaliana]
gi|332644137|gb|AEE77658.1| aspartyl protease family protein [Arabidopsis thaliana]
Length = 603
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I+ + V+ID+G+T+N++ LA L L T V +G + I++ G C + +
Sbjct: 290 ISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCFGINLLV 349
Query: 255 QGVGFEADFHILDFSR--ADAVLGV--------QWL 280
Q V +F +LD ++ D +LG QWL
Sbjct: 350 QEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWL 385
>gi|384485813|gb|EIE77993.1| hypothetical protein RO3G_02697 [Rhizopus delemar RA 99-880]
Length = 525
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
Q Q+ ++++EEI +T + I +K + L+D+G++ + LA L L I+
Sbjct: 81 QVAQQTMALIEDEEI---NTTAAYSTVSIGDKNIKALVDSGASKTCMSKALADALELEID 137
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEM-QGVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+ + + +L + +LG WL + K
Sbjct: 138 SASENVFTLGNGTKQPALGLIYDVPIEVKEDMVIPCTIEVLPSCPSHLILGSNWLNR-AK 196
Query: 286 IITDHKALTMEFTYKG 301
D + +++ YK
Sbjct: 197 AKIDFNSSSLKVKYKN 212
>gi|395327235|gb|EJF59636.1| hypothetical protein DICSQDRAFT_64631, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 391
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLH---LAIEKTMSFLVAVGNGERIRSEGHCSKVK 251
IN +P+ L+DTGS +++ +LAH L + K M +AV G R + C +
Sbjct: 194 INGQPVRALLDTGSLADFMSAKLAHQLKAETFELAKPMPLHLAV-QGSRAKINYGCIAL- 251
Query: 252 FEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALT 294
E Q + + F I++ D +LG + + HK LT
Sbjct: 252 VEYQNIKAKRYFDIINLLNYDVILGTPFFFQ-------HKVLT 287
>gi|147858167|emb|CAN83929.1| hypothetical protein VITISV_025158 [Vitis vinifera]
Length = 2249
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 96/250 (38%), Gaps = 50/250 (20%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
R L +L T SV Y F ++ + N+ + L F+SGL+ Q +L +L
Sbjct: 146 REALKRLRHTGSVREYVKEFSSLMLDIKNMSEEDKLFNFMSGLQGWAQTKLRRQGVRDLP 205
Query: 96 DAIALAKLI-----------------EDKLQSYNQ---KSISWKPTNT-------PIPTT 128
A+A A + E ++ N+ K WK N P+ T
Sbjct: 206 AAMAAADCLVNYKMGGAISTTQKPGSERGKKAKNEGKTKESGWKKQNKKPAAGGKPVEKT 265
Query: 129 TR--NETNIRLNPLLPLPPPNPSNPPKIALPICRLTA-------VEMQTRQEPSEILQEE 179
T+ +T + P + PK ++TA E R P ++L
Sbjct: 266 TKVVQQTTRMTGCFICNGPHRAKDCPKREKLSAQVTADDKGDSDSETPPRVNPLQLLN-- 323
Query: 180 EILVEDTVPKQLS-----AKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVA 234
++ P Q S A +N + L+D G+THN++ R A L L +E+
Sbjct: 324 --VIHGETPVQKSLMHIHAVVNGVQVKALVDNGATHNFVATREATRLGLKLEED-----T 376
Query: 235 VGNGERIRSE 244
VG+ + I S+
Sbjct: 377 VGSRQSIASQ 386
>gi|213406687|ref|XP_002174115.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212002162|gb|EEB07822.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 471
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGP-SSYINHRATLFKLTQTSSVEAYQSTFENICNRV 62
ED++ +L+E R + F P + + +R QT ++ + S+ + N +
Sbjct: 95 EDLENNKISLKE---FQRILRELFIPEDALMVYRHQFLDCHQTGTIREFVSSLQRFQN-I 150
Query: 63 TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
+L + D I G KP ++ +L + P +L DAI +A ED++
Sbjct: 151 LSLDDGTVKDQLIRGSKPHVRKDLRVGNPKSLTDAIRIANAAEDEV 196
>gi|213409550|ref|XP_002175545.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212003592|gb|EEB09252.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 305
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 4 EDMQTRYRALEEQAALTRAIESRFGP-SSYINHRATLFKLTQTSSVEAYQSTFENICNRV 62
ED++ +L+E R + F P + + +R QT ++ + S+ + N +
Sbjct: 118 EDLENNKISLKE---FQRILRELFIPEDALMVYRHQFLDCHQTGTIREFVSSLQRFQN-I 173
Query: 63 TNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKL 108
+L + D I G KP ++ +L + P +L DAI +A ED++
Sbjct: 174 LSLDDGTVKDQLIRGSKPHVRKDLRVGNPKSLTDAIRIANAAEDEV 219
>gi|156055170|ref|XP_001593509.1| hypothetical protein SS1G_04936 [Sclerotinia sclerotiorum 1980]
gi|154702721|gb|EDO02460.1| hypothetical protein SS1G_04936 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 748
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 192 SAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE-KTMSFLVAVGNGERIRSEGHCSKV 250
+AKIN + + +ID+G+T N++ P+ A +L + ++ K + + + +G+ +G S+
Sbjct: 292 NAKINGRVIRAMIDSGATGNFIAPKTAKYLGVQLQTKQTPYQLQLVDGQLAGLDGKISQE 351
Query: 251 KFEMQGVGFE----ADFHILDFSRADAVLGVQWLE 281
+Q + + F ++ +LG+ WL+
Sbjct: 352 TRSVQMIIDQHKEIIQFDVVPLGNQSIILGIPWLK 386
>gi|421615005|ref|ZP_16056043.1| hypothetical protein RBSH_05856 [Rhodopirellula baltica SH28]
gi|408494178|gb|EKJ98798.1| hypothetical protein RBSH_05856 [Rhodopirellula baltica SH28]
Length = 376
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 12/113 (10%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL-VAVGNGERIRSEGHCSK 249
++A +NN+P+ +++D+G+T L A L + I L + + NG+ I +
Sbjct: 261 VTASVNNQPIRMIVDSGATLVTLTAEAAKELKVEIPTDAPLLRLVMANGDEI----SAKR 316
Query: 250 VKFEMQGVG-FEA---DFHILD--FSRADAVLGVQWLEKLG-KIITDHKALTM 295
VK + VG FEA +L+ +RAD +LG+ +L + +I K+L+M
Sbjct: 317 VKLDSVRVGQFEAKNVSCAVLEPIATRADPMLGMSYLGEFKFEIDAAQKSLSM 369
>gi|326429186|gb|EGD74756.1| hypothetical protein PTSG_12517 [Salpingoeca sp. ATCC 50818]
Length = 282
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
R L +L Q +V+ Y F + ++ ++ ++ FI GL+P + E++ H P L
Sbjct: 131 RDQLRRLRQDGNVQDYVFKFRQLMVQIDDMSRLDRIEAFIHGLRPRTRQEVSFHGPDTLE 190
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTP 124
A LA + + N P P
Sbjct: 191 QAYQLASRYDRNYTTANSSYRRGAPPTQP 219
>gi|51854302|gb|AAU10683.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1638
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P ++L D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 574 VNSIPATILFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 632
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L D +LG+ WL K +I
Sbjct: 633 IQRSPFLANLILLGSKDLDVILGMDWLTKFKGVI 666
>gi|108710077|gb|ABF97872.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1299
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + + +LA+ ++ I C V +
Sbjct: 324 INSTPVKVLFDSGASHSFISLKASQKHNLALVGLRKPMIVHSPRGEITVSHACIDVPIRL 383
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 384 RNVVFPSNLMVLIPKTLDVILGMNWLTKNRGVI 416
>gi|62701703|gb|AAX92776.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group]
gi|77550523|gb|ABA93320.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1429
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I++ P ++L D+G++H ++ L +E+ + L+ G + ++ + V E+
Sbjct: 402 IHSIPATILFDSGASHLFIFVPFVGRNQLGVERLRNPLLITTPGGVMTAKYYSPAVPIEI 461
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
QG+ F +D +L D +LG+ L + I+
Sbjct: 462 QGIPFPSDLILLYTKNLDVILGMNLLAQFQGIV 494
>gi|147781636|emb|CAN75959.1| hypothetical protein VITISV_003125 [Vitis vinifera]
Length = 462
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 259 FEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYK 300
F + L + D VLG+QWLE+LG ++ + + +TMEF ++
Sbjct: 12 FVLTLYSLPLTGLDLVLGIQWLEQLGLVMCNWQKMTMEFQWE 53
>gi|77554851|gb|ABA97647.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1656
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 205 DTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFH 264
D ++H+++ L +E+ + L+ G + ++ + V E+QG+ F +D
Sbjct: 595 DAQASHSFISVPFVGRNQLGVERLRNPLLITTPGGDMTAKYYSPAVPIEIQGIPFPSDLI 654
Query: 265 ILDFSRADAVLGVQWLEKLGKII 287
+LD D +LG+ WL + ++
Sbjct: 655 LLDTKNLDVILGMNWLAQFQGVV 677
>gi|116309193|emb|CAH66288.1| OSIGBa0161P06.5 [Oryza sativa Indica Group]
Length = 1471
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 354 VNSIPATVLFDSGATHSFISKKFVGKHGLIREELSTPMRIHTPGNSSTSVQFSPSITIEI 413
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG+ WL K +I
Sbjct: 414 QRSPFLANLILLESKDLDVILGMDWLTKFKGVI 446
>gi|406696837|gb|EKD00111.1| retrotransposon nucleocapsid protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1662
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 19 LTRAIESRFG-PSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISG 77
+ + S FG P L+ L Q S AY + F V N + +A+ F G
Sbjct: 132 FCKELRSMFGDPDEVATAERQLYNLRQRGSASAYVADFTRFAA-VVNWNDEALCAQFYRG 190
Query: 78 LKPTIQNELA-IHKPSNLRDAIALAKLIEDKL-QSYNQKSISWKPTN--TPIPTTT 129
LK I++ELA KP +L+ A I+ +L + +N+K S K T+ + P TT
Sbjct: 191 LKDPIKDELARTDKPKDLKAYKETAVRIDTRLFERHNEKDRSVKTTSFTSTRPVTT 246
>gi|397575228|gb|EJK49597.1| hypothetical protein THAOC_31511 [Thalassiosira oceanica]
Length = 275
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAH---FLHLAIEKTMSFLVAVGNGERIRSEGHC 247
++ +IN KPL V +D+G+ + A LHL E+ V VG G +I HC
Sbjct: 79 IAVEINGKPLQVFVDSGAQSTIMSSECADRLGLLHLVDERFEGVAVGVGTG-KILGRIHC 137
Query: 248 SKVKFEMQGVGFEADFHILDFSRA------DAVLGVQWLEK 282
V+F + G ++D + D +LG+ L++
Sbjct: 138 --VEFGIGGALLPCTLTVMDSEQGLGDKNMDVLLGLDMLKR 176
>gi|284434488|gb|ADB85258.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1711
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P VL D+G++H+++ + L L K +V G + + +V+ +
Sbjct: 652 VNSVPAQVLFDSGASHSFVSRKFVERLKLPTYKLKKPVVLSSPGRPLYATSVSPRVEIAL 711
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ GF A +L+ D +L + WL +I
Sbjct: 712 EDSGFLATLLVLESQTLDIILRMDWLAAYHGLI 744
>gi|147826806|emb|CAN63950.1| hypothetical protein VITISV_032357 [Vitis vinifera]
Length = 1545
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N K L+DTG+THN++ A L L K +L AV + + S G V +
Sbjct: 437 VNGKATKALVDTGATHNFVSEDEARRLELQASKEGGWLKAVNSAAKP-SHGVARGVTMHI 495
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKI 286
DF + VLG+ +L+K+ +
Sbjct: 496 GLWEGRVDFTVAPMDDFKMVLGMDFLQKVKAV 527
>gi|38346969|emb|CAE02265.2| OSJNBb0049I21.5 [Oryza sativa Japonica Group]
Length = 1644
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
I+ P+ VL D G++H+++ + + +L K ++ G I + C V +
Sbjct: 462 IHFTPVKVLFDLGASHSFISLKASQRHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 521
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 522 RDVVFPSNLMVLVPQTLDVILGMDWLTKNRGVI 554
>gi|395322838|gb|EJF55451.1| hypothetical protein DICSQDRAFT_45193, partial [Dichomitus squalens
LYAD-421 SS1]
Length = 297
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 188 PKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSE 244
P + ++N +P LID+GS +++ RLAH L + + K + +AV G R +
Sbjct: 93 PVVVVVQVNEQPARALIDSGSLSDFMSARLAHQLGINVFELTKPLPVQLAV-QGSRAKIN 151
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
C + + E Q + E F +++ D +LG ++
Sbjct: 152 FGC-RARLEYQRIRSERYFDVINLLNYDLILGTPFI 186
>gi|384494398|gb|EIE84889.1| hypothetical protein RO3G_09599 [Rhizopus delemar RA 99-880]
Length = 950
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 167 QTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE 226
Q Q+ ++++EEI +T + I +K + L+D+G++ + LA L L I+
Sbjct: 521 QVAQQTMALIEDEEI---NTTAAYSTVSIGDKNIKALVDSGASKTCMSKALADALGLEID 577
Query: 227 KTMSFLVAVGNGERIRSEGHCSKVKFEM-QGVGFEADFHILDFSRADAVLGVQWLEKLGK 285
+ +GNG + + G V E+ + + +L + +LG WL + K
Sbjct: 578 SASENIFTLGNGTKQPALGLIYDVPIEVKEDMVIPCTIEVLPSCPSHLILGSNWLNR-AK 636
Query: 286 IITDHKALTMEFTYKG 301
D + +++ YK
Sbjct: 637 AKIDFSSSSLKVKYKN 652
>gi|320031518|gb|EFW13480.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
gi|320039325|gb|EFW21259.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 802
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN + L LIDTGS N L + A L+L +E + V GE C +V ++
Sbjct: 659 INQQELMALIDTGSEINLLSRKYAEMLNLPMENKPRVTMVVQTGEVAPFYAFCDEVPVQI 718
Query: 255 QGVGFEADFHILDFSRADAVLGVQW 279
+ F I + +LG W
Sbjct: 719 GDIVTHTPFLIFEGGDQQLILGRPW 743
>gi|77554116|gb|ABA96912.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 382
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 34 NHRATLFK----LTQTSSVEAYQSTFENICNRVTN----LHPDAILDCFISGLKPTIQNE 85
+ +ATL + + QT SV Y F+N+ + + + L P L F+ GLK I+
Sbjct: 97 DRQATLIRQWIHVGQTGSVAEYVERFDNLMHHLLSYDNALTPPYFLTKFVDGLKDEIRGV 156
Query: 86 LAIHKPSNLRDAIALAKLIEDKLQSYNQKSISWK 119
+ I KP +L A ++A L E+ L K IS++
Sbjct: 157 VMIQKPVDLDAACSVAMLQEEILD--GNKKISFR 188
>gi|384500681|gb|EIE91172.1| hypothetical protein RO3G_15883 [Rhizopus delemar RA 99-880]
Length = 786
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 160 RLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAH 219
R + Q Q+ ++++EEI +T + I +K + L+D+G++ + LA
Sbjct: 226 RKSRQSQQVAQQTMALIEDEEI---NTTAAYSTVSIGDKNIKALVDSGASKTCISKALAD 282
Query: 220 FLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM-QGVGFEADFHILDFSRADAVLGVQ 278
L L I+ + +GNG + + G E+ + + +L + +LG
Sbjct: 283 ALELEIDSASENVFTLGNGTKQPALGLIYDAPIEVKEDMVIPCTIEVLPSCPSHLILGSN 342
Query: 279 WLEKLGKIITDHKALTMEFTYKG 301
WL + K D + +++ YK
Sbjct: 343 WLNR-AKAKIDFNSSSLKVKYKN 364
>gi|326430764|gb|EGD76334.1| hypothetical protein PTSG_11674 [Salpingoeca sp. ATCC 50818]
Length = 1260
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
R L +L Q +V+ Y F + ++ ++ ++ FI GL+P + E++ H P L
Sbjct: 131 RDQLRRLRQDGNVQDYVFKFRQLMVQIDDMSRLDRIEAFIHGLRPRTRQEVSFHGPDTLE 190
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTP 124
A LA + + N P P
Sbjct: 191 QAYQLASRYDRNYTTANSSYRRGAPPTQP 219
>gi|449550412|gb|EMD41376.1| hypothetical protein CERSUDRAFT_29044, partial [Ceriporiopsis
subvermispora B]
Length = 850
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 62/147 (42%), Gaps = 18/147 (12%)
Query: 146 PNPSNPPKI-----ALPICRLTAVEMQTRQEPSE---ILQEEEILVED-----TVPKQLS 192
PNP N P P L AV + RQ + LQ +D P +
Sbjct: 570 PNPDNNPSDLGGDRTPPAVELNAVATRGRQAEHDNLPALQRNAARPQDFKRKIPEPAVVV 629
Query: 193 AKINNKPLSVLIDTGSTHNYLHPRLAHFLHLA---IEKTMSFLVAVGNGERIRSEGHCSK 249
+IN P L+D+GS +++ +LAH L + +EK + +AV G R + CS
Sbjct: 630 VEINGYPARALLDSGSLADFMSSKLAHQLGIKTFELEKPLPVHLAV-QGSRAKINVGCS- 687
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLG 276
+ + Q + F I++ D +LG
Sbjct: 688 AEIKYQAIRESRYFDIVNLLNYDLILG 714
>gi|326429609|gb|EGD75179.1| hypothetical protein PTSG_12494 [Salpingoeca sp. ATCC 50818]
Length = 1431
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 36 RATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLR 95
R L +L Q +V+ Y F + ++ ++ ++ FI GL+P + E++ H P L
Sbjct: 183 RDQLRRLRQDGNVQDYVFKFRQLMVQIDDMSRLDRIEAFIHGLRPRTRQEVSFHGPDTLE 242
Query: 96 DAIALAKLIEDKLQSYNQKSISWKPTNTP 124
A LA + + N P P
Sbjct: 243 QAYQLASRYDRNYTTANSSYRRGAPPTQP 271
>gi|326680172|ref|XP_003201468.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1222
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 45 TSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPS-NLRDAIALAKL 103
T SV Y F + + + +A++ CF +GL TIQ+ELA +PS +L + + A
Sbjct: 184 TGSVAEYAIKFRTMAAG-SGWNNEALMVCFQNGLSETIQDELATREPSLDLENLMEQAIR 242
Query: 104 IEDKLQS--YNQKSISWK-PTNTPIPTTTRNE 132
++++L+ +N S+ PT P PT+ E
Sbjct: 243 LDNRLRERYFNHPKPSFGVPTPAPTPTSQSQE 274
>gi|39546223|emb|CAE04472.3| OSJNBa0029L02.13 [Oryza sativa Japonica Group]
Length = 1158
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 14/100 (14%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCS------ 248
+N+ P +VL D+G+TH+++ + L E+ + + R+ + G+ S
Sbjct: 72 VNSFPATVLFDSGATHSFISKKFVGMHGLRKEELSTPM-------RVHTPGNSSTLVSFS 124
Query: 249 -KVKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
V E+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 125 PSVLIEIQRSPFLANLILLESKDLDVILGMDWLTKFKGVI 164
>gi|18425261|gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]
Length = 1181
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + E+
Sbjct: 404 VNSIPATVLFDSGATHSFISKKFVGMHGLIREELSTPMRVHTPGNSSTSVQFSPSITIEI 463
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q A+ +L+ D +LG+ WL K +I
Sbjct: 464 QRSPVLANLILLESKDLDVILGMDWLTKFKGVI 496
>gi|50872410|gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group]
gi|108708868|gb|ABF96663.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1760
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+ H+++ + +H I + +S + V G S + E
Sbjct: 643 VNSIPATVLFDSGAMHSFISKKFVG-MHGFIREELSTPMRVHTPGNSSTSVQFSPSITIE 701
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q F A+ +L+ D +LG+ WL K +I
Sbjct: 702 IQRSPFLANLILLESKDLDVILGMDWLTKFRGVI 735
>gi|320033195|gb|EFW15144.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 802
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN + L LIDTGS N L + A L L +E + V GE C +V ++
Sbjct: 659 INQQELMALIDTGSEINLLSRKYAEMLKLPMENKPRVTMVVQTGEVAPFYAFCDEVPVQI 718
Query: 255 QGVGFEADFHILDFSRADAVLGVQW 279
+ F I + +LG W
Sbjct: 719 GDIVTHTPFLIFEGGDQQLILGRPW 743
>gi|121501699|gb|ABM55240.1| retrotransposon protein [Beta vulgaris]
Length = 1501
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 185 DTVPKQLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSE 244
D V S IN+ + L D+G+T++++ P + L L +++ V++ GE ++
Sbjct: 360 DVVTGNFS--INSVFVKTLFDSGATYSFISPSVLKSLGLVEHESIDLSVSIPTGEVVKCT 417
Query: 245 GHCSKVKFEMQGVGFEADFHILDFSRADAVLGVQWL 280
+ ++ G F ++ + D +LG+ WL
Sbjct: 418 KLFKNLPLKIGGSVFPSELIEFNLGDLDVILGMNWL 453
>gi|31432176|gb|AAP53838.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P+ V D+G++H+++ + + +L K ++ G I + C V +
Sbjct: 372 LNSTPVKVPFDSGASHSFISLKASQQHNLTRVKLRQPMLVHSPGGEIAVDTACIDVPIRL 431
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ +L D +LG+ WL K +I
Sbjct: 432 RDVVFPSNLMVLIPQTLDVILGMDWLAKHRGVI 464
>gi|77555748|gb|ABA98544.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1112
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P +VL D+G+TH+++ + L E+ + + G + V E+
Sbjct: 110 INSVPATVLFDSGATHSFISKKFVGIHGLRKEELSTPMRVHTPGNSSTLVSYSPSVLIEI 169
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
F A+ +L+ D +LG+ W+ K +I
Sbjct: 170 HRSRFLANLILLESKDLDVILGMDWMTKFKGVI 202
>gi|449443680|ref|XP_004139605.1| PREDICTED: sodium/hydrogen exchanger 6-like [Cucumis sativus]
Length = 880
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 37 ATLFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRD 96
A L ++ Q S Y F + ++ + D F++GL+P +Q E+ P L D
Sbjct: 674 ARLIRIQQDGSYSEYVKKFVTYSAPLPHMEESVLRDAFLTGLEPNLQAEVVSRFPRTLED 733
Query: 97 AIALAKLIEDK 107
+ A+L+ D+
Sbjct: 734 CMREAQLVNDR 744
>gi|389645050|ref|XP_003720157.1| hypothetical protein MGG_17776 [Magnaporthe oryzae 70-15]
gi|351639926|gb|EHA47790.1| hypothetical protein MGG_17776 [Magnaporthe oryzae 70-15]
Length = 410
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNEL-AIHKPSNLRDA 97
L +LTQT S Y S F I +++ DA++ F GLK +++EL +P L +
Sbjct: 159 LSRLTQTKSASRYASEFRQITSKLA-WGKDALMARFYQGLKDEVKDELIKEERPQLLSEY 217
Query: 98 IALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPP 145
+ LA I++++ + + TP P P P P
Sbjct: 218 VELAVKIDNRIYERKLEKKEGRGAWTPRPQAANTGRRRWETPQAPRAP 265
>gi|147791940|emb|CAN72445.1| hypothetical protein VITISV_026551 [Vitis vinifera]
Length = 721
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 9/117 (7%)
Query: 55 FENICNRVTNLHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQK 114
E + R L +C IS LK ++ ++ + P NL AI LA+ E K Q
Sbjct: 141 LERLLARADTLIDKQEAECLISRLKDGLRXDVRVQNPQNLSVAIGLARTYELKAQEVR-- 198
Query: 115 SISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIALPICRLTAVEMQTRQE 171
+PTN ++ N N + N P +N +I LPI +L+ ++Q R++
Sbjct: 199 ----RPTNPTFSSSVHNSNN-QWNTSTP-SGAKDTNLERI-LPIHKLSPTKLQRRRQ 248
>gi|108863004|gb|ABG22100.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1620
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P+ VL D+G++H+++ + +L + ++ G I C + +
Sbjct: 579 INSSPVKVLFDSGASHSFISLEASQKHNLTLVGLRKPMIVHSPGGEITVSHACINIPIRL 638
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+ V F ++ ++ D +LG+ WL K +I
Sbjct: 639 RDVVFPSNLIVVIPQTLDVILGMDWLTKNRGVI 671
>gi|4539660|gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 38.1 bits (87), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 40/88 (45%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN+ P +VL D+G++H ++ L + + ++ G I C +
Sbjct: 391 INSIPATVLFDSGASHTFISQAFVRVHSLPLVAMNTPMLVNSPGGTIPVSLRCPSASLSL 450
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEK 282
+GV F ++ S D +LG+ W+++
Sbjct: 451 RGVDFPISPMVMRTSGIDVILGLDWMKQ 478
>gi|317419716|emb|CBN81752.1| Pol polyprotein [Dicentrarchus labrax]
Length = 1450
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 24/185 (12%)
Query: 39 LFKLTQTSSVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIH-KPSNLRDA 97
L L Q S A S I + +A+ F+ GL +++ELA ++L +
Sbjct: 179 LLNLRQGSGSVAEFSVEFRILAAESGWDEEALQTVFVHGLSEVMKDELAARDSAASLDEL 238
Query: 98 IALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSN--PPK-- 153
I+LA + D Q+ +P +P P R I + P L P +PS+ PP+
Sbjct: 239 ISLAIRL-DNRLRERQRERRGRPQASPFPALPR--ATISVGPQLAAPSKHPSSQIPPEPV 295
Query: 154 ---IALPICRLTAVEMQTRQEP--SEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGS 208
+ L RLT E Q R P S ++ VP S +N+ PL+ L+D+G+
Sbjct: 296 EEPMQLGRTRLTQAERQRRISPPYSHAIK--------CVP---SLAVNSIPLTALVDSGA 344
Query: 209 THNYL 213
+++
Sbjct: 345 EESFI 349
>gi|77557165|gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1619
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
++ ++ K L VL+D+GS+ +++ ++A L + V V NGE +
Sbjct: 471 RMLGQLQGKELLVLVDSGSSVSFISSQIAEGLTGIQPLSRRLSVRVANGETLCCGAIIPN 530
Query: 250 VKFEMQGVGFEADFHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTYKG 301
++++QG F+ +L + D +LG+ WL K + D T+ + +G
Sbjct: 531 CEWQVQGHKFQTTLRVLPITSYDMILGMDWLMKHSPMSVDWSLKTITLSLQG 582
>gi|255559780|ref|XP_002520909.1| conserved hypothetical protein [Ricinus communis]
gi|223539875|gb|EEF41454.1| conserved hypothetical protein [Ricinus communis]
Length = 150
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSK 249
Q+ + PL VLID+ STHN++ L L +++ V V NGER+ + K
Sbjct: 70 QVKGSVGGWPLLVLIDSRSTHNFVDEALEEQLRAPVDQWDIPQVLVANGERVCNLDKWKK 129
Query: 250 VKFEMQGVGFEADF 263
+ ++ F ++
Sbjct: 130 SQLQLGNQKFNIEY 143
>gi|119196817|ref|XP_001249012.1| hypothetical protein CIMG_02783 [Coccidioides immitis RS]
Length = 491
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
IN + L VLI+TGS N L + A L L IE + + V GE C KV ++
Sbjct: 20 INQQELMVLINTGSEINLLSWKYAEMLKLPIENKLQVTMVVQTGEVTPFYTFCDKVPVQI 79
Query: 255 QGVGFEADFHILDFSRADAVLGVQW 279
+ F I + +L W
Sbjct: 80 GDIVTHTPFLIFEGGDQQLILERPW 104
>gi|21743218|emb|CAD40073.1| OSJNBa0085C10.26 [Oryza sativa Japonica Group]
Length = 561
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P +VL D+G+TH+++ + L E+ + + G S + + E+
Sbjct: 295 VNSVPSTVLFDSGATHSFISKKFVGMHGLRKEELSTPMRVHTPGNSSTSVSYSPSMLIEI 354
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ + + D +LG+ WL K +I
Sbjct: 355 QRSPFLANLILHESKDQDVILGMDWLTKFKGVI 387
>gi|22725909|gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31430212|gb|AAP52158.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1719
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGN-GERIRSEGHCSKVKFE 253
+N+ P +VL D+G+TH+++ + +H I + +S + V G S + E
Sbjct: 651 VNSIPATVLFDSGATHSFISKKFVG-MHGLIREELSTPMRVHTPGNSSTSVQFSPSITIE 709
Query: 254 MQGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
+Q A+ +L+ D +LG+ WL K +I
Sbjct: 710 IQRSPVLANLILLESKDLDVILGMDWLTKFKGVI 743
>gi|326669487|ref|XP_003199024.1| PREDICTED: retrotransposable element Tf2 155 kDa protein type
1-like [Danio rerio]
Length = 1359
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 39 LFKLTQTS-SVEAYQSTFENICNRVTNLHPDAILDCFISGLKPTIQNELAIHK-PSNLRD 96
L +L Q+ SV Y F+ + + + A F +GL+ IQ+ELA H+ P N D
Sbjct: 159 LARLHQSGRSVTEYAILFKTLAASC-DWNEGACRSIFRAGLEEDIQDELATHELPHNFDD 217
Query: 97 AIALAKLIEDKLQSYNQKSISWKPTNTPIPTTTRNETNIRLNPLLPLPPPNPSNPPKIAL 156
I LA IE +L Q+ ++ ++ R E + + P +P + +
Sbjct: 218 LINLALRIEVRLNRRQQRKLT--------RSSGRVEGTLSSSTF-----PAAHDPEPMQV 264
Query: 157 PICRLTAVEMQTRQEPSEILQEEEILVEDTVPKQLSAKINNKPLSVLIDTGSTHNYLHPR 216
RLT E Q R P +P + + + S L+D+G+ N++
Sbjct: 265 GRLRLTPQEKQLRLAPPS--------SRTLLPALIQYRGSTNACSALLDSGAEGNFMDSS 316
Query: 217 LA 218
+A
Sbjct: 317 VA 318
>gi|226507669|ref|NP_001140639.1| uncharacterized protein LOC100272714 [Zea mays]
gi|194700296|gb|ACF84232.1| unknown [Zea mays]
Length = 459
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 19 LTRAIESRFGPSSYINHRATLFKLTQTSSVEAYQSTFENICNRVTNLHPD----AILDCF 74
TR + ++FG Y L L QT S++ + FE V+ +P + F
Sbjct: 192 FTRDVLNKFGADEYPKAMRRLMGLRQTGSLDEFVRAFEEARYMVSLHNPKLGEVLFVTQF 251
Query: 75 ISGLKPTIQNELAIHKPSNLRDAIALAKLIEDKLQSYNQKS 115
I GL+ +Q + P+ L A+ +AKL ++ Y +S
Sbjct: 252 IWGLEYDLQGAVQSQMPTTLDRAVLIAKLQDELNDQYKGRS 292
>gi|108862475|gb|ABA97082.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 637
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEM 254
+N+ P ++L+D+G+TH+++ + L E+ + + S + V E+
Sbjct: 439 VNSIPATILLDSGATHSFISKKFVRVHGLRKEELSTPMRFHTPWNSSTSVSYNPSVVIEI 498
Query: 255 QGVGFEADFHILDFSRADAVLGVQWLEKLGKII 287
Q F A+ +L+ D +LG WL K II
Sbjct: 499 QISQFLANLILLESKDLDVILGKDWLTKFKGII 531
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,690,164,591
Number of Sequences: 23463169
Number of extensions: 197166792
Number of successful extensions: 825405
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 446
Number of HSP's that attempted gapping in prelim test: 823693
Number of HSP's gapped (non-prelim): 1808
length of query: 301
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 160
effective length of database: 9,050,888,538
effective search space: 1448142166080
effective search space used: 1448142166080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)