Query 036248
Match_columns 301
No_of_seqs 123 out of 1506
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 18:40:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s8i_A Protein DDI1 homolog 1; 99.9 2.6E-21 8.9E-26 150.4 12.8 107 190-299 26-134 (148)
2 2i1a_A DNA damage-inducible pr 99.8 4.1E-18 1.4E-22 133.4 12.8 105 190-298 28-134 (148)
3 1fmb_A EIAV protease; hydrolas 99.1 6.6E-10 2.3E-14 80.1 11.4 95 190-290 10-104 (104)
4 3slz_A GAG-Pro-POL polyprotein 99.1 6.9E-10 2.4E-14 83.2 10.3 92 190-291 24-115 (132)
5 3ec0_A Protease; HIV-2, inhibi 98.9 3.3E-08 1.1E-12 69.9 11.8 90 190-290 10-99 (99)
6 2hs1_A HIV-1 protease; ultra-h 98.9 5.3E-08 1.8E-12 69.1 12.1 90 190-290 10-99 (99)
7 2hah_A Protease, retropepsin; 98.6 4.7E-07 1.6E-11 66.2 9.9 94 190-289 16-115 (116)
8 3ka2_A [L-Ala51;Gly51']HIV-1 p 98.5 2E-06 6.8E-11 69.0 12.0 91 190-291 10-100 (203)
9 3sqf_A Protease; folded monome 98.0 1.2E-05 4E-10 58.2 6.1 97 190-295 11-112 (114)
10 3ka2_A [L-Ala51;Gly51']HIV-1 p 98.0 0.00012 4E-09 58.7 12.1 90 190-290 114-203 (203)
11 2rsp_A RSV protease; hydrolase 97.8 2.2E-05 7.4E-10 57.9 5.3 85 195-285 27-119 (124)
12 2pma_A Uncharacterized protein 97.8 3.9E-05 1.3E-09 58.3 5.8 94 197-292 17-139 (146)
13 3lhr_A Zinc finger protein 24; 97.4 0.0011 3.7E-08 46.2 8.6 75 33-107 6-90 (93)
14 3liy_A Protease; hydrolase, hy 97.4 0.00086 2.9E-08 48.1 8.0 90 190-285 12-111 (116)
15 2fi2_A Zinc finger protein 42; 97.0 0.0045 1.5E-07 42.7 8.1 73 33-105 7-89 (94)
16 4e6s_A Zinc finger and SCAN do 96.9 0.0034 1.2E-07 43.7 6.7 71 33-104 6-86 (93)
17 1y7q_A AW-1, zinc finger prote 96.8 0.0057 1.9E-07 42.6 7.7 74 33-106 9-92 (98)
18 2jys_A Protease/reverse transc 96.6 0.026 9E-07 38.5 9.1 86 191-284 10-97 (107)
19 1lya_B Cathepsin D; lysosomal 94.5 0.13 4.6E-06 42.3 8.1 93 200-298 121-238 (241)
20 1am5_A Pepsin, acid proteinase 94.4 0.12 4E-06 44.8 7.9 99 194-299 198-322 (324)
21 3cms_A Chymosin B; hydrolase, 94.2 0.2 6.9E-06 43.2 8.9 101 193-299 198-321 (323)
22 2apr_A Rhizopuspepsin; hydrola 94.1 0.13 4.6E-06 44.5 7.6 92 199-299 212-322 (325)
23 1yg9_A Aspartic protease BLA G 94.1 0.2 6.7E-06 43.5 8.6 100 193-298 202-326 (330)
24 4aa9_A Chymosin; hydrolase, as 93.8 0.17 6E-06 43.5 7.7 99 194-298 196-317 (320)
25 1tzs_A Cathepsin E; hydrolase, 93.8 0.33 1.1E-05 42.5 9.5 100 194-299 211-340 (351)
26 1dpj_A Proteinase A; proteinas 93.6 0.32 1.1E-05 42.1 9.1 100 194-299 202-327 (329)
27 3fv3_A SAPP1P-secreted asparti 93.5 0.46 1.6E-05 41.2 9.9 103 194-298 205-326 (339)
28 3qvc_A Histo-aspartic protease 93.5 0.16 5.5E-06 46.2 7.1 101 193-298 322-446 (451)
29 2x0b_A Renin; hydrolase-hormon 93.4 0.25 8.7E-06 43.8 8.2 98 194-298 252-380 (383)
30 3k1w_A Renin; protease, altern 93.3 0.24 8.2E-06 43.0 7.7 99 194-298 209-337 (341)
31 1wkr_A Polyporopepsin; hydrola 93.1 0.19 6.4E-06 43.8 6.7 102 193-299 195-331 (340)
32 1j71_A Candidapepsin, aspartic 92.9 0.24 8.3E-06 42.9 7.1 97 193-298 202-321 (334)
33 1oew_A Endothiapepsin; hydrola 92.8 0.44 1.5E-05 41.2 8.7 102 194-299 202-328 (329)
34 3pvk_A Candidapepsin-2; hydrol 92.7 0.48 1.7E-05 41.1 8.8 98 194-298 202-328 (342)
35 1htr_B Gastricsin; aspartyl pr 92.6 0.2 6.8E-06 43.4 6.2 99 194-298 199-326 (329)
36 1bxo_A Protein (penicillopepsi 92.5 0.49 1.7E-05 40.8 8.5 102 194-299 199-321 (323)
37 1ibq_A Aspergillopepsin; aspar 92.5 0.23 8E-06 42.9 6.5 101 194-299 198-323 (325)
38 1miq_A Plasmepsin; aspartic pr 92.4 0.64 2.2E-05 41.0 9.4 101 193-298 247-371 (375)
39 2bju_A Plasmepsin II; aspartic 92.3 0.42 1.5E-05 43.4 8.2 100 193-298 323-447 (453)
40 1mpp_A Pepsin; hydrolase(acid 92.3 0.24 8.3E-06 43.4 6.5 101 194-299 219-353 (361)
41 3aup_A SBG7S, BG, basic 7S glo 92.3 0.39 1.3E-05 42.9 7.9 95 202-297 262-382 (403)
42 3c9x_A Trichoderma reesei aspa 92.2 0.4 1.4E-05 41.5 7.7 97 199-299 213-328 (329)
43 2qzx_A Candidapepsin-5; aspart 92.2 0.19 6.4E-06 43.8 5.5 103 193-299 202-329 (342)
44 1izd_A Aspartic proteinase; su 91.6 0.69 2.4E-05 39.8 8.4 96 199-298 208-320 (323)
45 1t6e_X Xylanase inhibitor; two 90.4 0.89 3E-05 40.1 8.1 27 272-299 345-371 (381)
46 3lpj_A Beta-secretase 1; alzhe 90.3 0.19 6.5E-06 45.7 3.8 27 271-298 391-417 (455)
47 3psg_A Pepsinogen; hydrolase(a 90.3 0.5 1.7E-05 41.7 6.3 93 200-298 254-367 (370)
48 3vf3_A Beta-secretase 1; struc 90.1 0.19 6.5E-06 44.9 3.5 27 271-298 345-371 (402)
49 2jyl_A Capsid protein P24 (Ca) 89.5 1 3.5E-05 31.9 6.2 67 37-103 22-94 (105)
50 3g1g_A GAG polyprotein, capsid 88.1 2 7E-05 28.9 6.5 66 39-104 3-75 (87)
51 3ds4_A HIV-1 capsid protein; H 88.0 1.7 5.7E-05 29.6 6.3 64 39-102 5-74 (86)
52 2ewy_A Beta-secretase 2; BACE2 87.9 0.63 2.2E-05 41.1 5.3 28 271-299 326-353 (383)
53 2bju_A Plasmepsin II; aspartic 87.6 1.8 6.2E-05 39.2 8.2 87 190-279 141-252 (453)
54 3qvc_A Histo-aspartic protease 87.5 1.6 5.5E-05 39.6 7.7 87 190-279 140-251 (451)
55 1eoq_A GAG polyprotein capsid 87.4 1.2 4.2E-05 30.5 5.2 64 41-104 2-72 (96)
56 2x0b_A Renin; hydrolase-hormon 87.3 3 0.0001 36.8 9.3 87 190-279 64-175 (383)
57 3g21_A GAG polyprotein, capsid 87.1 1.6 5.6E-05 28.7 5.4 64 39-102 4-74 (77)
58 3vla_A EDGP; extracellular, in 85.7 2 6.9E-05 38.4 7.4 26 272-298 371-396 (413)
59 2qp8_A Beta-secretase 1; BACE1 85.7 3.7 0.00013 36.2 9.1 28 271-299 338-365 (395)
60 1bxo_A Protein (penicillopepsi 85.4 3.5 0.00012 35.3 8.5 88 190-279 18-126 (323)
61 1wkr_A Polyporopepsin; hydrola 85.3 4.1 0.00014 35.1 9.0 85 190-279 15-109 (340)
62 1ibq_A Aspergillopepsin; aspar 84.5 2.3 7.8E-05 36.5 7.0 88 190-279 17-125 (325)
63 3cms_A Chymosin B; hydrolase, 84.4 5.7 0.0002 33.9 9.5 87 190-279 17-127 (323)
64 1izd_A Aspartic proteinase; su 84.2 2.3 7.8E-05 36.5 6.8 88 190-279 18-126 (323)
65 1miq_A Plasmepsin; aspartic pr 82.4 2.1 7.1E-05 37.7 5.9 84 193-279 68-176 (375)
66 1baj_A GAG polyprotein; capsid 82.3 2.2 7.5E-05 29.9 4.8 66 38-104 5-77 (101)
67 3k1w_A Renin; protease, altern 81.8 9.3 0.00032 32.7 9.8 87 190-279 21-132 (341)
68 4aa9_A Chymosin; hydrolase, as 81.7 7.2 0.00025 33.1 9.0 87 190-279 14-124 (320)
69 3psg_A Pepsinogen; hydrolase(a 81.2 6.1 0.00021 34.6 8.5 87 190-279 59-169 (370)
70 3c9x_A Trichoderma reesei aspa 81.1 6.8 0.00023 33.6 8.6 88 190-279 18-130 (329)
71 1oew_A Endothiapepsin; hydrola 80.7 6.5 0.00022 33.7 8.4 88 190-279 18-129 (329)
72 1yg9_A Aspartic protease BLA G 80.1 3.6 0.00012 35.3 6.5 87 190-279 20-128 (330)
73 1dpj_A Proteinase A; proteinas 79.8 9.7 0.00033 32.5 9.2 87 190-279 16-126 (329)
74 1tzs_A Cathepsin E; hydrolase, 79.8 7.6 0.00026 33.6 8.6 87 190-279 26-136 (351)
75 3pvk_A Candidapepsin-2; hydrol 79.6 7.7 0.00026 33.3 8.6 88 190-279 15-128 (342)
76 1htr_B Gastricsin; aspartyl pr 79.6 11 0.00039 32.0 9.6 87 190-279 15-125 (329)
77 1d1d_A Protein (capsid protein 79.4 4 0.00014 33.9 6.1 65 39-103 175-249 (262)
78 1mpp_A Pepsin; hydrolase(acid 78.8 6.2 0.00021 34.3 7.7 87 190-279 21-137 (361)
79 1am5_A Pepsin, acid proteinase 78.4 9.2 0.00032 32.6 8.6 87 190-279 15-125 (324)
80 1b5f_A Protein (cardosin A); h 77.8 16 0.00055 29.5 9.6 87 190-279 16-127 (239)
81 1qrj_B HTLV-I capsid protein; 77.7 6.3 0.00021 31.3 6.6 64 39-102 118-188 (199)
82 3fv3_A SAPP1P-secreted asparti 77.1 5.1 0.00017 34.4 6.6 88 190-279 15-122 (339)
83 2apr_A Rhizopuspepsin; hydrola 75.1 8.8 0.0003 32.8 7.5 88 190-279 18-127 (325)
84 1qdm_A Prophytepsin; aspartic 74.6 9.4 0.00032 34.7 7.9 27 271-298 449-475 (478)
85 1lya_A Cathepsin D; lysosomal 74.5 3.2 0.00011 28.8 3.7 26 190-215 16-43 (97)
86 2qzx_A Candidapepsin-5; aspart 74.1 11 0.00036 32.4 7.9 88 190-279 15-128 (342)
87 1j71_A Candidapepsin, aspartic 70.2 14 0.00047 31.6 7.6 88 190-279 15-128 (334)
88 3aup_A SBG7S, BG, basic 7S glo 69.4 27 0.00093 30.7 9.6 26 190-215 24-51 (403)
89 2ewy_A Beta-secretase 2; BACE2 69.3 19 0.00063 31.4 8.4 27 190-216 16-44 (383)
90 1qdm_A Prophytepsin; aspartic 69.2 23 0.0008 32.1 9.2 87 190-279 55-166 (478)
91 1eia_A EIAV capsid protein P26 68.4 8.9 0.0003 30.6 5.4 63 39-101 135-203 (207)
92 3lpj_A Beta-secretase 1; alzhe 66.2 18 0.00063 32.4 7.9 87 190-279 77-185 (455)
93 3vf3_A Beta-secretase 1; struc 62.1 17 0.00057 32.0 6.7 87 190-279 31-139 (402)
94 3h47_A Ca, capsid protein P24; 59.1 15 0.00051 29.8 5.2 66 38-103 149-220 (231)
95 3gv2_A Ca, fusion protein cons 54.8 19 0.00066 31.0 5.4 66 38-103 149-220 (342)
96 3tir_A ROUS sarcoma virus caps 53.6 26 0.0009 28.3 5.8 65 38-102 152-223 (226)
97 1t6e_X Xylanase inhibitor; two 47.4 30 0.001 30.1 5.8 16 197-214 23-38 (381)
98 1b5f_B Protein (cardosin A); h 46.6 12 0.00043 24.8 2.5 28 271-299 58-85 (87)
99 1b5f_A Protein (cardosin A); h 44.4 18 0.0006 29.3 3.5 28 194-221 198-232 (239)
100 2qp8_A Beta-secretase 1; BACE1 33.1 33 0.0011 30.0 3.7 27 190-216 24-52 (395)
No 1
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=99.86 E-value=2.6e-21 Score=150.41 Aligned_cols=107 Identities=19% Similarity=0.246 Sum_probs=89.3
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceeccc--ceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEec
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTM--SFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILD 267 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~--~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 267 (301)
++.+.|||+++++||||||++++|+.++|+++|+...... ...+..+ |. ..+.+.+..+.+.+++..+..+|.|++
T Consensus 26 ~v~~~Ing~~v~~LVDTGAs~s~Is~~~A~rlGL~~~~~~~~~~~a~g~-G~-~~~~g~v~~~~I~Ig~~~~~~~~~Vle 103 (148)
T 3s8i_A 26 YINCKVNGHPLKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGVAKGV-GT-QRIIGRVHLAQIQIEGDFLQCSFSILE 103 (148)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEHHHHHHTTCGGGEEGGGCEECCC-----CEEEEEEEEEEEEETTEEEEEEEEEET
T ss_pred EEEEEECCEEEEEEEeCCCCcEeeCHHHHHHcCCccccCcceeEEEEcC-Cc-cEEEEEEEEEEEEECCEEEEEEEEEeC
Confidence 8899999999999999999999999999999999764222 2222222 32 345566777899999999999999999
Q ss_pred CCCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 268 FSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 268 ~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
..++|+|||+|||.+++. .|||.+++|+|..
T Consensus 104 ~~~~d~LLGmD~L~~~~~-~ID~~~~~L~l~~ 134 (148)
T 3s8i_A 104 DQPMDMLLGLDMLRRHQC-SIDLKKNVLVIGT 134 (148)
T ss_dssp TCSSSEEECHHHHHHTTC-EEETTTTEEECTT
T ss_pred CCCcCeeccHHHHHhCCE-EEEcCCCEEEEcc
Confidence 889999999999999996 8999999998864
No 2
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=99.77 E-value=4.1e-18 Score=133.38 Aligned_cols=105 Identities=20% Similarity=0.318 Sum_probs=83.1
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceE--EEEecCceEeecceeeeEEEEEeceeEEEeEEEec
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFL--VAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILD 267 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 267 (301)
.+.+.|||+++.+||||||++++|+.++++++++.......+. +...+|.. ..+.+...++.+++..+..+|.|++
T Consensus 28 ~v~v~InG~~~~~LvDTGAs~s~is~~~a~~lgl~~~~~~~~~~~a~g~g~~~--~~~~~~~~~i~ig~~~~~~~~~vl~ 105 (148)
T 2i1a_A 28 YINIEINNYPVKAFVDTGAQTTIMSTRLAKKTGLSRMIDKRFIGEARGVGTGK--IIGRIHQAQVKIETQYIPCSFTVLD 105 (148)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEHHHHHHHTGGGGCBCCCC-------------CEEEEEEEEEETTEEEEEEEEEEC
T ss_pred EEEEEECCEEEEEEEECCCCccccCHHHHHHcCCCccCCcceEEEEecCCCcc--cccEEEEEEEEECCEEeceeEEEec
Confidence 8889999999999999999999999999999999754332332 23333332 2344455688999999999999999
Q ss_pred CCCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 268 FSRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 268 ~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
.++|+|||+|||.+++. .|||.+++|+|.
T Consensus 106 -~~~d~iLG~d~L~~~~~-~ID~~~~~l~l~ 134 (148)
T 2i1a_A 106 -TDIDVLIGLDMLKRHLA-CVDLKENVLRIA 134 (148)
T ss_dssp -SSCSEEECHHHHHHTTC-EEETTTTEEEET
T ss_pred -CCCCeEecHHHHhhCCE-EEECCCCEEEEc
Confidence 67999999999999996 899999999884
No 3
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=99.14 E-value=6.6e-10 Score=80.09 Aligned_cols=95 Identities=22% Similarity=0.262 Sum_probs=75.8
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+.++|+|+++.+|+||||..++++.+.+.+++++-.+.++..+... |+.+.+. ...+.+.+.++.....++|-+.
T Consensus 10 ~v~v~I~Gq~~e~LLDTGAD~TVl~~~~w~~i~lp~~~w~p~~i~Gi-GG~i~v~--~~~i~i~i~g~~~~gtvlv~~t- 85 (104)
T 1fmb_A 10 TTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGIGGV-GGNVETF--STPVTIKKKGRHIKTRMLVADI- 85 (104)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEHHHHHHCSSCCCCEECCCEEET-TEEECCE--EEEEEEEETTEEEEEEEEEESC-
T ss_pred EEEEEECCEEEEEEeccCCCcEEEccccCcccCCCCccCCccEEEeC-CCeEEee--EeeeEEEECCeEEEEEEEECCC-
Confidence 77899999999999999999999999999999988652234444444 6656665 4679999999998888888553
Q ss_pred CCcEEecHHHHhhcCCeEeec
Q 036248 270 RADAVLGVQWLEKLGKIITDH 290 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~ 290 (301)
..-|||+|+|.+.+. .+||
T Consensus 86 -p~niiGRd~L~qlg~-tLnf 104 (104)
T 1fmb_A 86 -PVTILGRDILQDLGA-KLVL 104 (104)
T ss_dssp -SSCEECHHHHHHTTC-CCCC
T ss_pred -CCCEecHhHHhhcCc-EEeC
Confidence 245899999999995 7775
No 4
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=99.09 E-value=6.9e-10 Score=83.22 Aligned_cols=92 Identities=20% Similarity=0.269 Sum_probs=70.8
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+.++|||+++.+|+||||+.++++..-+. .. ..+..+..++|... .. ....+.+.+++......++|++..
T Consensus 24 ~v~i~I~G~~~~~LlDTGAd~tVl~~~~~p-----~~-~~p~~I~GiGG~i~-vr-~~~~i~IeI~g~~~~~~~lV~~~t 95 (132)
T 3slz_A 24 RITLKVGGQPVTFLVDTGAQHSVLTQNPGP-----LS-DKSAWVQGATGGKR-YR-WTTDRKVHLATGKVTHSFLHVPDC 95 (132)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECSCCCS-----EE-EEEEEEECSSCEEE-EE-EECCEEEEETTEEEEECCEECTTS
T ss_pred EEEEEECCEEEEEEEeCCCCeEEEccccCC-----CC-CCceEEEccCCEEE-EE-EEeeeEEEECCeeecceEEEECCC
Confidence 888999999999999999999999976333 22 24678888888754 32 223467888898888788765433
Q ss_pred CCcEEecHHHHhhcCCeEeecc
Q 036248 270 RADAVLGVQWLEKLGKIITDHK 291 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~~ 291 (301)
+ .-|||+|||.+++. .+|+-
T Consensus 96 P-vnLLGrd~Ltqlg~-tL~fp 115 (132)
T 3slz_A 96 P-YPLLGRDLLTKLKA-QIHFE 115 (132)
T ss_dssp S-SCEECHHHHHHHTC-EEEEE
T ss_pred C-ccEECHhhHhhCCc-EEECC
Confidence 3 47899999999996 89996
No 5
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=98.89 E-value=3.3e-08 Score=69.94 Aligned_cols=90 Identities=22% Similarity=0.303 Sum_probs=67.1
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+.++|+|+.+.+|+||||..++++. ..++-.. ++. +..+-|+.+.+... ..+.+.+.|+.....++|-+ .
T Consensus 10 ~vti~I~Gq~~e~LLDTGAD~TVl~~-----~~~Pg~w-~pk-~igGiGG~i~v~qy-~~i~iei~g~~~~gtvlV~~-t 80 (99)
T 3ec0_A 10 VVTAYIEGQPVEVLLDTGADDSIVAG-----IELGNNY-SPK-IVGGIGGFINTKEY-KNVEIEVLNKKVRATIMTGD-T 80 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEESS-----CCCCSCC-EEE-EEEETTEEEEEEEE-EEEEEEETTEEEEEEEEEEC-C
T ss_pred eEEEEECCEEEEEEEecCCCceEEcC-----cccCCCC-Cce-EEEecCCcEeeeEE-eeEEEEECCeEEEEEEEeCC-C
Confidence 67889999999999999999999963 3444321 223 45556776766553 57889999998777777744 3
Q ss_pred CCcEEecHHHHhhcCCeEeec
Q 036248 270 RADAVLGVQWLEKLGKIITDH 290 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~ 290 (301)
+. =|||+|+|.+.+. .++|
T Consensus 81 Pv-niiGRnlLtqlG~-tLnf 99 (99)
T 3ec0_A 81 PI-NIFGRNILTALGM-SLNL 99 (99)
T ss_dssp SS-CEECHHHHHHHTC-EEEC
T ss_pred Cc-CeeehhhHhhcCc-EEeC
Confidence 33 4699999999995 8876
No 6
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=98.86 E-value=5.3e-08 Score=69.11 Aligned_cols=90 Identities=17% Similarity=0.226 Sum_probs=67.3
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+.++|+|+.+.+|+||||..++++.. .++-.. .|. ...+-|+.+++.. ...+.+.+.++.....++|-+ .
T Consensus 10 ~vtvkI~Gq~~eaLLDTGAD~TVl~~~-----~~p~~w-kpk-~igGiGG~i~v~q-y~qi~iei~g~~~~gtvlV~~-t 80 (99)
T 2hs1_A 10 LVTIKIGGQLKEALLDTGADDTIIEEM-----SLPGRW-KPK-MIGGIGGFIKVRQ-YDQIIIEIAGHKAIGTVLVGP-T 80 (99)
T ss_dssp EEEEEETTEEEEEEECTTCSSEEESCC-----SSCCCC-EEE-EEEETTEEEEEEE-EEEEEEEETTEEEEEEEEESC-C
T ss_pred EEEEEECCEEEEEEeccCCCcEEEecc-----cCCCCC-CCc-EEEeCCCcEeeeE-eccEEEEEeCCEEEEEEEeCC-C
Confidence 778899999999999999999999853 444321 233 3444466666653 357899999999888888844 3
Q ss_pred CCcEEecHHHHhhcCCeEeec
Q 036248 270 RADAVLGVQWLEKLGKIITDH 290 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~ 290 (301)
.. =|||+|+|.+.+. .+||
T Consensus 81 Pv-niiGRd~Ltqlg~-tLnf 99 (99)
T 2hs1_A 81 PV-NIIGRNLLTQIGA-TLNF 99 (99)
T ss_dssp SS-CEECHHHHTTTTC-EEEC
T ss_pred cc-CchhHhHHHHcCC-EEeC
Confidence 34 3799999999995 7775
No 7
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=98.57 E-value=4.7e-07 Score=66.20 Aligned_cols=94 Identities=21% Similarity=0.213 Sum_probs=64.4
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEecee-----EEEeEE
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVG-----FEADFH 264 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 264 (301)
.+ ++|+|+.+.+|+||||..++|+..-+... +-.. .+.....+-|+.+++. ....+.+.+.++. ....++
T Consensus 16 ~v-ikI~Gq~~eaLLDTGAD~TVi~~~~~~~~--p~~w-kpk~~igGiGG~i~v~-qy~qv~iei~g~~~~~~~~~gtvl 90 (116)
T 2hah_A 16 IL-IFVNGYPIKFLLDTGADITVLNRRDFQVK--NSIE-NGRQMIGGIGGFIRGT-NYINVHLEIRDENYKTQCIFGNVC 90 (116)
T ss_dssp EE-EEETTEEEEEEECTTCSSCEEEGGGCCCT--TCEE-EEEEEEEETTEEEEEE-EEEEEEEEECCTTSCCEEEEEEEE
T ss_pred EE-EEECCEEEEEEecCCCCcEEEcccccccC--CCCC-CCceEEecCCCceeee-EEccEEEEEeCCCCCcceeEEEEE
Confidence 66 99999999999999999999996432111 2222 2222144446656554 3356888898887 777888
Q ss_pred Eec-CCCCcEEecHHHHhhcCCeEee
Q 036248 265 ILD-FSRADAVLGVQWLEKLGKIITD 289 (301)
Q Consensus 265 v~~-~~~~d~ILG~dwL~~~~~i~id 289 (301)
|.+ ...--=|||+|+|.+.+. .+.
T Consensus 91 V~p~tP~~vniiGRd~Ltqlg~-tL~ 115 (116)
T 2hah_A 91 VLEDNSTPVNILGRDNMIKFNI-RLV 115 (116)
T ss_dssp EETTCCCSSEEECHHHHTTTTC-CCC
T ss_pred ECCCCCccccEecHHHHhHcCC-EEe
Confidence 888 431125899999999985 543
No 8
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=98.48 E-value=2e-06 Score=68.99 Aligned_cols=91 Identities=16% Similarity=0.249 Sum_probs=67.8
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+.++|+|+++.+|+||||..+++.. .+++-. ..|..+ .+-|+.+.+... ..+.+.+.|+.....++|-+ .
T Consensus 10 ~vtv~I~Gq~~e~LLDTGAD~TVl~~-----~~lpg~-w~pk~i-gGIGG~i~vrqy-~~i~iei~g~~~~gtvlVg~-t 80 (203)
T 3ka2_A 10 LVTIRIGGQLKEALLDTGADDTVIEE-----LNLPGX-WKPKLI-GGIAGFIKVRQY-DQIPVEIXGHKAIGTVLVGP-T 80 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEECS-----CCCSSC-EEEEEE-EETTEEEEEEEE-EEEEEEETTEEEEEEEEESC-C
T ss_pred eEEEEECCEEEEEEEecCCCceEEec-----ccCCCC-CCceEE-EEccCcEEEEEE-cceeEEEcCeEEEEEEeeCC-C
Confidence 67889999999999999999999983 455432 123333 444665655433 46888999999887777754 3
Q ss_pred CCcEEecHHHHhhcCCeEeecc
Q 036248 270 RADAVLGVQWLEKLGKIITDHK 291 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~~ 291 (301)
..+ |||+|.|.+.+. .+||.
T Consensus 81 Pvn-IiGRd~LtqlG~-tLnf~ 100 (203)
T 3ka2_A 81 PVN-IIGRNLLTQIGX-TLNFX 100 (203)
T ss_dssp SSC-EECHHHHTTTTC-EEEGG
T ss_pred CcC-ccchhhhhhcCc-eEEec
Confidence 444 899999999995 89986
No 9
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=98.00 E-value=1.2e-05 Score=58.21 Aligned_cols=97 Identities=12% Similarity=0.078 Sum_probs=56.1
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCccee--cc-cceEEEEecCceEeecceeeeEE-EE-EeceeEEEeEE
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIE--KT-MSFLVAVGNGERIRSEGHCSKVK-FE-MQGVGFEADFH 264 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~--~~-~~~~v~~~~g~~~~~~~~~~~~~-~~-~~~~~~~~~~~ 264 (301)
.+.++|+|+.+.+|+||||..++|+.. .++-. +. ....+... |+.+.+... ..+. .. +.|+......+
T Consensus 11 ~vti~I~Gq~~eaLLDTGADdTVi~~~-----~lpg~W~p~~~~k~igGI-GG~i~v~qy-~~~~~~~~i~g~k~i~tvl 83 (114)
T 3sqf_A 11 SLTLWLDDKMFTGLINTGADVTIIKLE-----DWPPNWPITDTLTNLRGI-GQSNNPKQS-SKYLTWRDKENNSGLIKPF 83 (114)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEEGG-----GSCTTSCEEECCCCCTTC-CGGGCCEEE-SSCEEEECTTCCEEEECCE
T ss_pred eEEEEECCEEEEEEEccCCCceEEecc-----cCCCCcccCcCceEEEec-cceEEEEEe-ccceEEEecCCCEEEEEEE
Confidence 778999999999999999999999853 33322 10 01222222 443433322 2222 22 57887777777
Q ss_pred EecCCCCcEEecHHHHhhcCCeEeeccceEE
Q 036248 265 ILDFSRADAVLGVQWLEKLGKIITDHKALTM 295 (301)
Q Consensus 265 v~~~~~~d~ILG~dwL~~~~~i~id~~~~~~ 295 (301)
|.+..+.+ |+|+|.|.+.+. .++|-+..+
T Consensus 84 V~~ptPvN-IiGRn~LtqlG~-tLnfp~~~~ 112 (114)
T 3sqf_A 84 VIPNLPVN-LWGRDLLSQMKI-MMASPNDIV 112 (114)
T ss_dssp EETTCSSC-EECHHHHTTSCC----------
T ss_pred ECCCCccc-EEchhhHhhcCc-EEECCCccc
Confidence 76434454 489999999995 888876554
No 10
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=97.97 E-value=0.00012 Score=58.71 Aligned_cols=90 Identities=18% Similarity=0.242 Sum_probs=65.4
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCC
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFS 269 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 269 (301)
.+..+|+|+.+.+|+||||..+++. ...++-. .+|..+ .+-|+.+++..- ..+.+.+.|+.....++|-+.
T Consensus 114 ~~~iki~Gq~~e~LlDTGAD~TVl~-----~~~lpg~-w~pk~i-gGiGg~i~v~qy-~~i~iei~g~~~~~tvlVgpt- 184 (203)
T 3ka2_A 114 LVTIRIGGQLKEALLDTGADDTVIE-----ELNLPGX-WKPKLI-GGIGGFIKVRQY-DQIPVEIXGHKAIGTVLVGPT- 184 (203)
T ss_dssp EEEEEETTEEEEEEECTTCSSCEEC-----SCCCCSC-CEEEEE-EETTEEEEEEEE-EEEEEEETTEEEEEEEEESCC-
T ss_pred cEEEEECCEEEeeeecccCCceeee-----cccCCCC-CCceEE-eeccceEEEEEe-ccEEEEECCeEEEEEEEECCC-
Confidence 6778999999999999999999995 3344422 123333 444665555433 468889999988888877663
Q ss_pred CCcEEecHHHHhhcCCeEeec
Q 036248 270 RADAVLGVQWLEKLGKIITDH 290 (301)
Q Consensus 270 ~~d~ILG~dwL~~~~~i~id~ 290 (301)
++ =|+|+|.|.+.+. .++|
T Consensus 185 Pv-niiGRn~LtqlG~-tl~f 203 (203)
T 3ka2_A 185 PV-NIIGRNLLTQIGX-TLNF 203 (203)
T ss_dssp SS-CEECHHHHGGGTC-EEEC
T ss_pred Cc-CeechhhHHHhCC-eeeC
Confidence 33 3689999999995 7775
No 11
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=97.84 E-value=2.2e-05 Score=57.91 Aligned_cols=85 Identities=13% Similarity=0.177 Sum_probs=49.7
Q ss_pred EcCEeEEEEEcCCCCccccCHHHHHHcCcceec----ccceEEEEecCceEeecceeeeEEEEEece--eEEEeEEEecC
Q 036248 195 INNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK----TMSFLVAVGNGERIRSEGHCSKVKFEMQGV--GFEADFHILDF 268 (301)
Q Consensus 195 v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~----~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~ 268 (301)
|+|+.+.+|+||||..+++... .++-.. .....+...+|. ++.......+.+.+.++ .....+.|.|.
T Consensus 27 i~gq~~eaLLDTGAD~TVl~~~-----~lP~~W~k~~~~~~~igGIGG~-i~v~qy~~~i~iei~g~~g~~~~tvlV~P~ 100 (124)
T 2rsp_A 27 QRSVYITALLDSGADITIISEE-----DWPTDWPVMEAANPQIHGIGGG-IPMRKSRDMIELGVINRDGSLERPLLLFPA 100 (124)
T ss_dssp CSEEEEEEEECTTCSSCEEETT-----TSCTTSCEEECC---------C-CCEEEESSCEEEEEECTTSCBCCCEEECCE
T ss_pred CCCEEEEEEecCCCCcEEEecc-----cCCCcceeeccccceeeecCce-EeeEEeCCceEEEEeCCCCcEEEEEEECcC
Confidence 8999999999999999999853 333221 111235555443 33332211567777666 44556666663
Q ss_pred C--CCcEEecHHHHhhcCC
Q 036248 269 S--RADAVLGVQWLEKLGK 285 (301)
Q Consensus 269 ~--~~d~ILG~dwL~~~~~ 285 (301)
. .--=|+|+|.|.+.+.
T Consensus 101 ~~~tPvnIiGRdlLtqlG~ 119 (124)
T 2rsp_A 101 VAMVRGSILGRDCLQGLGL 119 (124)
T ss_dssp EESCSSEEECHHHHHHTTC
T ss_pred CCCCceeEECHhHHhhCCc
Confidence 1 1124899999999995
No 12
>2pma_A Uncharacterized protein; APC86035.2, protein LPG0085, DUF785, legionella pneumophila pneumophila STR. philadelphia 1; 1.89A {Legionella pneumophila subsp} SCOP: b.50.1.3
Probab=97.77 E-value=3.9e-05 Score=58.31 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=60.8
Q ss_pred CEeEEEEEcCCCCccccCHHHHHHcC---cc--------------ee-c-ccceEEEEecCce--------Eeecceeee
Q 036248 197 NKPLSVLIDTGSTHNYLHPRLAHFLH---LA--------------IE-K-TMSFLVAVGNGER--------IRSEGHCSK 249 (301)
Q Consensus 197 ~~~v~~liDsGAs~~~i~~~~~~~~~---~~--------------~~-~-~~~~~v~~~~g~~--------~~~~~~~~~ 249 (301)
|.++.|=|||||..+-|+..-++.+. -+ .. + .....|+..+|.. ...... ..
T Consensus 17 g~~~~AKiDTGA~TSSLhA~dI~~Ferdg~~wVrF~~~~~~~~~~~e~pv~~~~~Ik~s~g~~~~~~~~~~~e~R~V-V~ 95 (146)
T 2pma_A 17 NLTLSAKLDTGAKSASLHAVNITEIEKKGIPYLRFTVPTKTGDYSFEGEYVGKVKIKVRSSETNPGLLRTTPIKRPV-VL 95 (146)
T ss_dssp TEEEEEEECTTCSSEEEECEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEEEEEC---------------CCEEEE-EE
T ss_pred CCEEEEEecCCcCcceecceeEEEeeeCCCcEEEEEEecCCCCceEEEEeEEEEEEecCCCccccccccCCcccccE-EE
Confidence 56789999999999988877554321 00 00 1 1223344444441 122222 36
Q ss_pred EEEEEeceeEEEeEEEecCC--CCcEEecHHHHhhcCCeEeeccc
Q 036248 250 VKFEMQGVGFEADFHILDFS--RADAVLGVQWLEKLGKIITDHKA 292 (301)
Q Consensus 250 ~~~~~~~~~~~~~~~v~~~~--~~d~ILG~dwL~~~~~i~id~~~ 292 (301)
+.+.+++....++|...+-+ .|+|+||+.||...+. .||=..
T Consensus 96 ~~i~lG~~~~~ie~tLtdRs~m~ypmLLGR~~L~~~~~-lVD~s~ 139 (146)
T 2pma_A 96 LNIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDFNG-AVDPAL 139 (146)
T ss_dssp EEEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHTTE-EEETTC
T ss_pred EEEEECCEEEEEEEEEcCCCcCCCCEEechhHHhhCCE-EECCch
Confidence 78899999999999999965 5999999999998884 788543
No 13
>3lhr_A Zinc finger protein 24; SCAN domain, protein structure initiative, center for eukary structural genomics, PSI-2, CESG, nucleus, phosphoprotein; 1.90A {Homo sapiens} SCOP: a.28.3.0
Probab=97.42 E-value=0.0011 Score=46.23 Aligned_cols=75 Identities=16% Similarity=0.231 Sum_probs=62.8
Q ss_pred hhHHHHHhcCcc--cccHHHHHHHHHHHHHHhh--c------CCHHHHHHHHHhcCCHHHHHhcccCCCCcHHHHHHHHH
Q 036248 33 INHRATLFKLTQ--TSSVEAYQSTFENICNRVT--N------LHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102 (301)
Q Consensus 33 ~~~~~~l~~lkQ--~~sv~~Y~~~f~~L~~~~~--~------~~e~~~~~~f~~GL~~~i~~~l~~~~p~tl~~~~~~A~ 102 (301)
+..+.+|+...- ..+..+.+.++++|++++- + +-|...+.+|+.-|+.+++.+|..+.|.+-++|+.++.
T Consensus 6 E~~rq~FR~f~y~e~~gp~eal~~L~eLc~~WLrPe~htKEQileLLVLEQFL~ilP~e~q~wv~~~~p~s~~eav~l~E 85 (93)
T 3lhr_A 6 EIFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDHHPENGEEAVTVLE 85 (93)
T ss_dssp HHHHHHHHHCCGGGSSSHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTCCSSHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHhcCcccCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhCCCCHHHHHHHHH
Confidence 346778888764 7789999999999999993 2 24456789999999999999999999999999999988
Q ss_pred HHHHH
Q 036248 103 LIEDK 107 (301)
Q Consensus 103 ~~e~~ 107 (301)
.+...
T Consensus 86 ~l~~~ 90 (93)
T 3lhr_A 86 DLESE 90 (93)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 76543
No 14
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=97.39 E-value=0.00086 Score=48.12 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=56.6
Q ss_pred EEEEEEc-----CEeEEEEEcCCCCccccCHHHHHHcCcceec-ccceEEEEecCceEeecceeeeEEEEEec----eeE
Q 036248 190 QLSAKIN-----NKPLSVLIDTGSTHNYLHPRLAHFLHLAIEK-TMSFLVAVGNGERIRSEGHCSKVKFEMQG----VGF 259 (301)
Q Consensus 190 ~i~~~v~-----~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~-~~~~~v~~~~g~~~~~~~~~~~~~~~~~~----~~~ 259 (301)
.+.++|+ |+.+.||+||||..+++..- .++-.. ..+..+..+-|+.... .....+.+.+.. ...
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~-----~lPg~Wkp~~tkiiGGiGg~~~~-~qs~~~pv~i~lpfr~~pv 85 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIA-----LFSSNTPLKNTSVLGAGGQTQDH-FKLTSLPVLIRLPFRTTPI 85 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGG-----GSCTTCCEEECCEEETTEEESSS-EEEESSCEEEECTTCCSCE
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecc-----cCCCCCcccccceEeecccceee-eEecCCCeEEEeccCCcce
Confidence 6778999 99999999999999999843 333321 1111444444543322 233445555543 344
Q ss_pred EEeEEEecCCCCcEEecHHHHhhcCC
Q 036248 260 EADFHILDFSRADAVLGVQWLEKLGK 285 (301)
Q Consensus 260 ~~~~~v~~~~~~d~ILG~dwL~~~~~ 285 (301)
....+.++..+-=-|||+|-|.+.+.
T Consensus 86 ~l~~~lv~~~~~w~iigRd~l~q~q~ 111 (116)
T 3liy_A 86 VLTSCLVDTKNNWAIIGRDALQQCQG 111 (116)
T ss_dssp EESSCEEETTSCCCEECHHHHHHTTC
T ss_pred eeceEEEcCCCceeEechhHHhhhcc
Confidence 45555555554446899999999885
No 15
>2fi2_A Zinc finger protein 42; SCAN domain, ZNF-42, MZF-1, homodimer, transcription factor, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.28.3.2
Probab=97.00 E-value=0.0045 Score=42.72 Aligned_cols=73 Identities=16% Similarity=0.279 Sum_probs=61.1
Q ss_pred hhHHHHHhcCcc--cccHHHHHHHHHHHHHHhh--c------CCHHHHHHHHHhcCCHHHHHhcccCCCCcHHHHHHHHH
Q 036248 33 INHRATLFKLTQ--TSSVEAYQSTFENICNRVT--N------LHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102 (301)
Q Consensus 33 ~~~~~~l~~lkQ--~~sv~~Y~~~f~~L~~~~~--~------~~e~~~~~~f~~GL~~~i~~~l~~~~p~tl~~~~~~A~ 102 (301)
+..+.+|+...- .....+=+.++++||.++- . +-|...+.+|+.-|+.+++.+|..+.|.+-++|+.++.
T Consensus 7 E~~rq~FR~f~y~e~~gPreaL~rLreLc~qWLrPe~hTKEQIlElLVLEQFL~iLP~eiq~wV~~~~P~s~eeav~lvE 86 (94)
T 2fi2_A 7 EAARLRFRCFHYEEATGPQEALAQLRELCRQWLRPEVRSKEQMLELLVLEQFLGALPPEIQARVQGQRPGSPEEAAALVD 86 (94)
T ss_dssp HHHHHHHHSCCCCTTTCHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHSCHHHHHHHHHHCCCSHHHHHHHHH
T ss_pred hHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHCCcccccHHHHHHHHHHHHHHHhCcHHHHHHHHhcCCCcHHHHHHHHH
Confidence 336778888765 6678899999999999993 2 24557789999999999999999999999999999987
Q ss_pred HHH
Q 036248 103 LIE 105 (301)
Q Consensus 103 ~~e 105 (301)
.+.
T Consensus 87 dl~ 89 (94)
T 2fi2_A 87 GLR 89 (94)
T ss_dssp HHT
T ss_pred HHH
Confidence 654
No 16
>4e6s_A Zinc finger and SCAN domain-containing protein 10; protein interaction, other scans, N-terminal PA finger transcription factor, transcription; 1.85A {Mus musculus}
Probab=96.86 E-value=0.0034 Score=43.66 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=58.7
Q ss_pred hhHHHHHhcCcc--cccHHHHHHHHHHHHHHhh--c------CCHHHHHHHHHhcCCHHHHHhcccCCCCcHHHHHHHHH
Q 036248 33 INHRATLFKLTQ--TSSVEAYQSTFENICNRVT--N------LHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102 (301)
Q Consensus 33 ~~~~~~l~~lkQ--~~sv~~Y~~~f~~L~~~~~--~------~~e~~~~~~f~~GL~~~i~~~l~~~~p~tl~~~~~~A~ 102 (301)
+..+.+|+...- ..+..+.+.++++|++++- . +-|...+.+|+.-|+.+++.+|..+.|.+-++|+. +.
T Consensus 6 E~~rq~Fr~f~y~e~~gPreal~~L~eLc~~WLrPe~htKEQIleLLVLEQFL~ilP~e~q~wv~~~~p~s~eeav~-~E 84 (93)
T 4e6s_A 6 EVAHQLFRCFQYQEDMGPRASLGRLRELCNHWLRPALHTKKQILELLVLEQFLSVLPPHVLSRLHGAPLRDGEEVAQ-LE 84 (93)
T ss_dssp HHHHHHHHTCCCCTTTCHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHHHHHHHHTSCHHHHGGGTTCCCSCHHHHHH-TT
T ss_pred hHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhCCCcHHHHHH-HH
Confidence 446788888765 7789999999999999993 2 24456789999999999999999999999999988 65
Q ss_pred HH
Q 036248 103 LI 104 (301)
Q Consensus 103 ~~ 104 (301)
.+
T Consensus 85 ~l 86 (93)
T 4e6s_A 85 GV 86 (93)
T ss_dssp C-
T ss_pred HH
Confidence 43
No 17
>1y7q_A AW-1, zinc finger protein 174; SCAN domain, retroviral capsid C-terminal domain, dimer, C2H2 zinc finger associated, transcription; NMR {Homo sapiens} SCOP: a.28.3.2
Probab=96.85 E-value=0.0057 Score=42.56 Aligned_cols=74 Identities=12% Similarity=0.172 Sum_probs=61.7
Q ss_pred hhHHHHHhcCcc--cccHHHHHHHHHHHHHHhh--c------CCHHHHHHHHHhcCCHHHHHhcccCCCCcHHHHHHHHH
Q 036248 33 INHRATLFKLTQ--TSSVEAYQSTFENICNRVT--N------LHPDAILDCFISGLKPTIQNELAIHKPSNLRDAIALAK 102 (301)
Q Consensus 33 ~~~~~~l~~lkQ--~~sv~~Y~~~f~~L~~~~~--~------~~e~~~~~~f~~GL~~~i~~~l~~~~p~tl~~~~~~A~ 102 (301)
+..+.+|+...- .....+=+.++++||.++- . +-|...+.+|+.-|+.+++.+|..+.|.+-++|+.++.
T Consensus 9 E~~rq~FR~f~y~e~~gPreaL~rLreLC~qWLrPe~hTKEQIlElLVLEQFL~iLP~eiq~wV~~~~P~s~eeav~lvE 88 (98)
T 1y7q_A 9 ELCRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPEEIQARVRHRCLMSSKEIVTLVE 88 (98)
T ss_dssp THHHHHHHTCCSCSCCSSHHHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHHSCTHHHHHHHTSCCCCHHHHHHHHH
T ss_pred HHHHHHhccCCCCCCCCHHHHHHHHHHHHHHHCCcccccHHHHHHHHHHHHHHHhCCHHHHHHHhccCCCcHHHHHHHHH
Confidence 336788888764 6678899999999999993 2 34557789999999999999999999999999999987
Q ss_pred HHHH
Q 036248 103 LIED 106 (301)
Q Consensus 103 ~~e~ 106 (301)
.+..
T Consensus 89 dl~~ 92 (98)
T 1y7q_A 89 DFHR 92 (98)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7553
No 18
>2jys_A Protease/reverse transcriptase; retroviral protease, hydrolase; NMR {Simian foamy virus type 1}
Probab=96.57 E-value=0.026 Score=38.54 Aligned_cols=86 Identities=22% Similarity=0.277 Sum_probs=62.5
Q ss_pred EEEEEcCEeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecceeeeEEEEEeceeEEEeEEEecCCC
Q 036248 191 LSAKINNKPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFEADFHILDFSR 270 (301)
Q Consensus 191 i~~~v~~~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 270 (301)
+.+.|.|..+.+.-||||+.+.|...|.... .|.....+.+..|....- +-=++|.++|.....+++..+. +
T Consensus 10 L~vEiKg~kLkg~WDsGA~ITCiP~~fL~~E----~PI~~~~I~TIHG~k~q~---vYYl~fKv~GRKveaEVi~sp~-d 81 (107)
T 2jys_A 10 LEAEIKGTKLKAHWDSGATITCVPEAFLEDE----RPIQTMLIKTIHGEKQQD---VYYLTFKVQGRKVEAEVLASPY-D 81 (107)
T ss_dssp EEEEETTEEEEEEECTTCSSEEEEGGGTTTC----CCSEEEEEECSSCEEEEE---EEEEEEEESSCEEEEEEEEESS-S
T ss_pred eeEEEeCcEEEEEecCCCeEEEcchHHhccc----ccccceEEEEecCceece---EEEEEEEEcCeEEEEEEecCcc-c
Confidence 6688999999999999999999999875432 355677888888875322 2347889999988888776662 2
Q ss_pred CcEEe--cHHHHhhcC
Q 036248 271 ADAVL--GVQWLEKLG 284 (301)
Q Consensus 271 ~d~IL--G~dwL~~~~ 284 (301)
|-+|- -.||+.+..
T Consensus 82 Yvli~P~DiPW~~~~p 97 (107)
T 2jys_A 82 YILLNPSDVPWLMKKP 97 (107)
T ss_dssp SEEECTTTCHHHHSCC
T ss_pred EEEEcCcCccccccCc
Confidence 32221 348887655
No 19
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=94.51 E-value=0.13 Score=42.29 Aligned_cols=93 Identities=18% Similarity=0.249 Sum_probs=57.0
Q ss_pred EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe--------------
Q 036248 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD-------------- 262 (301)
Q Consensus 200 v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~-------------- 262 (301)
..++||||++..++..+.+..+.-..... . ..+|.. +.|.. ..+.+.+.++|..+.+.
T Consensus 121 ~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-~----~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~ 195 (241)
T 1lya_B 121 CEAIVDTGTSLMVGPVDEVRELQKAIGAV-P----LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKT 195 (241)
T ss_dssp EEEEECTTCSSEEECHHHHHHHHHHHTCE-E----EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSS
T ss_pred CEEEEECCCccccCCHHHHHHHHHHhCCe-e----ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCC
Confidence 47999999999999999887763221100 0 012221 22211 12446666666554321
Q ss_pred -EE--EecC-----CCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 -FH--ILDF-----SRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 -~~--v~~~-----~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
|. +.+. .+-..|||..||+.+-. ..|+.+++|.|.
T Consensus 196 ~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~-vfD~~~~~igfA 238 (241)
T 1lya_B 196 LCLSGFMGMDIPPPSGPLWILGDVFIGRYYT-VFDRDNNRVGFA 238 (241)
T ss_dssp EEEESEEECCCCTTTCCCEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred eeEEEEEecccCCCCCCeEEechHHhcceEE-EEECCCCEEEEE
Confidence 11 2222 23568999999999994 899999999885
No 20
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=94.45 E-value=0.12 Score=44.75 Aligned_cols=99 Identities=15% Similarity=0.171 Sum_probs=62.6
Q ss_pred EEcCEe-----EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe---
Q 036248 194 KINNKP-----LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD--- 262 (301)
Q Consensus 194 ~v~~~~-----v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~--- 262 (301)
.|+|+. ..++||||++..++..+.+..+.-..... ..+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 198 ~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~ 271 (324)
T 1am5_A 198 TVNGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSA 271 (324)
T ss_dssp EETTEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHH
T ss_pred EECCceeeccCceEEEecCCccEECCHHHHHHHHHHhCCc------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHH
Confidence 566654 57999999999999988777653221110 112321 12211 23456777777665431
Q ss_pred --------EE--EecC-----CCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 --------FH--ILDF-----SRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 --------~~--v~~~-----~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+. .+-..|||..||+.+- +..|..+++|.|..
T Consensus 272 y~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y-~vfD~~~~~igfa~ 322 (324)
T 1am5_A 272 YIEGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYY-TIYDRTNNKVGFAP 322 (324)
T ss_dssp HEEESSSCEEECEEECCSCCSSSCEEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred hcccCCCeEEEEEEECccCCCCCCcEEEChHHhccEE-EEEECCCCEEEEEE
Confidence 11 2222 1346899999999999 48999999998853
No 21
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=94.18 E-value=0.2 Score=43.25 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=62.3
Q ss_pred EEEcCEeE------EEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeec--ceeeeEEEEEeceeEEEe-
Q 036248 193 AKINNKPL------SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSE--GHCSKVKFEMQGVGFEAD- 262 (301)
Q Consensus 193 ~~v~~~~v------~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~--~~~~~~~~~~~~~~~~~~- 262 (301)
+.|+|+.+ .++||||++..++..+.+..+.-..... . ..+|.. +.+. ...+.+.+.++|..+.+.
T Consensus 198 i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-~----~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~ 272 (323)
T 3cms_A 198 VTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGAT-Q----NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTP 272 (323)
T ss_dssp EEETTEEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCE-E----ETTTEEEECTTCTTTSCCEEEEETTEEEEECH
T ss_pred EEECCEEeecCCCcEEEEecCCccEeCCHHHHHHHHHHhCCe-e----cCCCcEEEECCCCccCceEEEEECCEEEEECH
Confidence 36777654 6999999999999998877653222100 0 011211 1121 123456777777665432
Q ss_pred ----------EE--EecC-CCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 ----------FH--ILDF-SRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 ----------~~--v~~~-~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+. .+-..|||..||+.+- +..|..+++|.|..
T Consensus 273 ~~y~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 321 (323)
T 3cms_A 273 SAYTSQDQGFCTSGFQSENHSQKWILGDVFIREYY-SVFDRANNLVGLAK 321 (323)
T ss_dssp HHHEEEETTEEEESEEEC---CCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred HHhccCCCCEEEEEEEeCCCCCcEEECHHHhhceE-EEEECCCCEEEEEE
Confidence 11 2222 2356899999999999 48999999998853
No 22
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=94.14 E-value=0.13 Score=44.46 Aligned_cols=92 Identities=14% Similarity=0.152 Sum_probs=54.1
Q ss_pred eEEEEEcCCCCccccCHH----HHHHcCcceecccceEEEEecCceEeecce-eeeEEEEEeceeEEEe-----------
Q 036248 199 PLSVLIDTGSTHNYLHPR----LAHFLHLAIEKTMSFLVAVGNGERIRSEGH-CSKVKFEMQGVGFEAD----------- 262 (301)
Q Consensus 199 ~v~~liDsGAs~~~i~~~----~~~~~~~~~~~~~~~~v~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~----------- 262 (301)
...++||||++..++..+ +++.+.-...... +-.+.+... .+.+.+.++|..+.+.
T Consensus 212 ~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~g--------~~~~~C~~~~~p~i~f~f~g~~~~ip~~~~~~~~~~~ 283 (325)
T 2apr_A 212 SFDGILDTGTTLLILPNNIAASVARAYGASDNGDG--------TYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQG 283 (325)
T ss_dssp CEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSSS--------CEEECSCGGGCCCEEEEETTEEEEECGGGGEEEEETT
T ss_pred CceEEEecCCccEECCHHHHHHHHHHHhcccCCCC--------eEEEECCCCCCCcEEEEECCEEEEECHHHEEEcCCCC
Confidence 357999999999999999 6555543221100 011111111 2344445443332211
Q ss_pred -EE--EecCCCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 -FH--ILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 -~~--v~~~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
++ +.....-..|||..||+.+- +..|+.+++|.|..
T Consensus 284 ~C~~~i~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 322 (325)
T 2apr_A 284 QCIAGFGYGNWGFAIIGDTFLKNNY-VVFNQGVPEVQIAP 322 (325)
T ss_dssp EEEESEEEESSSSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred eEEEEEEcCCCCCEEECHHHhcceE-EEEECCCCEEEEEe
Confidence 11 11112345899999999999 48999999999853
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=94.11 E-value=0.2 Score=43.50 Aligned_cols=100 Identities=15% Similarity=0.156 Sum_probs=64.5
Q ss_pred EEEcCEe-----EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecC--c--eEeecc--eeeeEEEEEeceeEEE
Q 036248 193 AKINNKP-----LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG--E--RIRSEG--HCSKVKFEMQGVGFEA 261 (301)
Q Consensus 193 ~~v~~~~-----v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g--~--~~~~~~--~~~~~~~~~~~~~~~~ 261 (301)
+.|+|+. ..++||||++..++..+.+..+.-..... ...+| . .+.+.. ..+.+.+.++|..+.+
T Consensus 202 i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~-----~~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l 276 (330)
T 1yg9_A 202 VKIGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCV-----VEKTTTRRICKLDCSKIPSLPDVTFVINGRNFNI 276 (330)
T ss_dssp EEETTEEEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCE-----EEECSSCEEEEECGGGGGGSCCEEEEETTEEEEE
T ss_pred EEECCEEEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCc-----ccCCCceEEEEEECCCccccCcEEEEECCEEEEE
Confidence 3667654 46999999999999999887763322110 01123 1 122321 2356778888777654
Q ss_pred e-----------EE--EecC-CCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 262 D-----------FH--ILDF-SRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 262 ~-----------~~--v~~~-~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
. +. +.+. .+-..|||..||+.+-. ..|+.+++|.|.
T Consensus 277 ~~~~y~~~~~~~C~~~i~~~~~~~~~ilG~~fl~~~y~-vfD~~~~riGfA 326 (330)
T 1yg9_A 277 SSQYYIQQNGNLCYSGFQPCGHSDHFFIGDFFVDHYYS-EFNWENKTMGFG 326 (330)
T ss_dssp CHHHHEEEETTEEEESEEEETTCSSEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred CHHHhcccCCCcEEEEEEeCCCCCeEEecHHHhhheEE-EEECCCCEEEEE
Confidence 2 11 1221 23468999999999994 899999999885
No 24
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=93.80 E-value=0.17 Score=43.51 Aligned_cols=99 Identities=17% Similarity=0.206 Sum_probs=60.5
Q ss_pred EEcCEe------EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe--
Q 036248 194 KINNKP------LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD-- 262 (301)
Q Consensus 194 ~v~~~~------v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~-- 262 (301)
.|+|.. ..++||||++..++..+.+..+.-..... ...+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 196 ~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~-----~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~ 270 (320)
T 4aa9_A 196 TINGVAVACVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT-----ENRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPS 270 (320)
T ss_dssp EETTEEEESTTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE-----ECTTSCEEECGGGGGGCCCEEEEETTEEEEECHH
T ss_pred EECCEEeccCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc-----ccCCCcEEEeCCCCCcCceEEEEECCEEEEECHH
Confidence 566653 46999999999999998877753221100 0011211 11211 12456666666655432
Q ss_pred ---------EE--EecC-CCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 ---------FH--ILDF-SRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 ---------~~--v~~~-~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+. +.+. .+-..|||..||+.+- +..|+.+++|.|.
T Consensus 271 ~y~~~~~~~C~~~i~~~~~~~~~ilG~~fl~~~y-~vfD~~~~~igfA 317 (320)
T 4aa9_A 271 AYTSKDQGFCTSGFQGDNNSELWILGDVFIREYY-SVFDRANNRVGLA 317 (320)
T ss_dssp HHEEEETTEEEESEEEETTCCCEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred HhccCCCCeEEEEEEcCCCCCcEEEChHHhcceE-EEEECCCCEEEEE
Confidence 11 1111 2245999999999999 4899999999885
No 25
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=93.76 E-value=0.33 Score=42.46 Aligned_cols=100 Identities=13% Similarity=0.170 Sum_probs=58.6
Q ss_pred EEcCEe------EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecc--eeeeEEEEEeceeEEEe---
Q 036248 194 KINNKP------LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEG--HCSKVKFEMQGVGFEAD--- 262 (301)
Q Consensus 194 ~v~~~~------v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~--- 262 (301)
.|+|+. ..++||||++..++..+.+..+.-..... .. .+.-.+.+.. ..+.+.+.++|..+.+.
T Consensus 211 ~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~-~~----~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~ 285 (351)
T 1tzs_A 211 QVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAA-PV----DGEYAVECANLNVMPDVTFTINGVPYTLSPTA 285 (351)
T ss_dssp EETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE-EC----SSSEEECGGGGGGSCCEEEEETTEEEEECTTT
T ss_pred EECCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCc-cc----CCeEEEeCCCCccCCcEEEEECCEEEEECHHH
Confidence 667765 36999999999999999877653211100 00 0000111111 12344555555443221
Q ss_pred ------------EE--EecC-----CCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 ------------FH--ILDF-----SRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 ------------~~--v~~~-----~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+. ..-..|||..||+.+- +..|+.+++|.|..
T Consensus 286 yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~~~~rigfA~ 340 (351)
T 1tzs_A 286 YTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFY-SVFDRGNNRVGLAP 340 (351)
T ss_dssp SEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEE-EEEETTTTEEEEEE
T ss_pred hEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheE-EEEECCCCEEEEEE
Confidence 11 2221 2346899999999999 48999999999853
No 26
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=93.61 E-value=0.32 Score=42.06 Aligned_cols=100 Identities=19% Similarity=0.229 Sum_probs=60.0
Q ss_pred EEcCEe-----EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe---
Q 036248 194 KINNKP-----LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD--- 262 (301)
Q Consensus 194 ~v~~~~-----v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~--- 262 (301)
.|++.. ..++||||++..++..+.++.+.-..... ...+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 202 ~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-----~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~ 276 (329)
T 1dpj_A 202 GLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAK-----KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYD 276 (329)
T ss_dssp EETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCE-----ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTT
T ss_pred EECCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCc-----cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHH
Confidence 566654 35999999999999999887763221100 0011211 11211 12345566665544321
Q ss_pred --------EE--EecC-----CCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 --------FH--ILDF-----SRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 --------~~--v~~~-----~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+. .+-..|||..||+.+- +..|+.+++|.|..
T Consensus 277 y~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 327 (329)
T 1dpj_A 277 YTLEVSGSCISAITPMDFPEPVGPLAIVGDAFLRKYY-SIYDLGNNAVGLAK 327 (329)
T ss_dssp SEEEETTEEEECEEECCCCTTTCSEEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred hEecCCCEEEEEEEecccCCCCCCcEEEChHHhcceE-EEEECCCCEEEEEE
Confidence 11 1222 2346899999999999 48999999998853
No 27
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=93.49 E-value=0.46 Score=41.19 Aligned_cols=103 Identities=17% Similarity=0.247 Sum_probs=58.6
Q ss_pred EEcCEeE----EEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCc-eEeecc-eeeeEEEEE-eceeEEEeE--E
Q 036248 194 KINNKPL----SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE-RIRSEG-HCSKVKFEM-QGVGFEADF--H 264 (301)
Q Consensus 194 ~v~~~~v----~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~~-~~~~~~~~~-~~~~~~~~~--~ 264 (301)
.|+|+.+ .++||||.+..++..+.+..+.-....... ......|. .+.+.. ..+.+.+.+ +|..+.+.. +
T Consensus 205 ~v~g~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~-~~~~~~~~~~~~C~~~~~p~i~f~f~~g~~~~v~~~~~ 283 (339)
T 3fv3_A 205 NLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLV-QVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEY 283 (339)
T ss_dssp EESSCEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEE-EEETTEEEEEECTTCCCCSEEEEEETTSCEEEEEGGGG
T ss_pred EECCEeecCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEc-cccccCceEEEecCCCCCCcEEEEECCCCEEEECHHHh
Confidence 5677544 599999999999999988776322210000 00000010 111111 123466666 355443321 1
Q ss_pred EecCC----------CCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 265 ILDFS----------RADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 265 v~~~~----------~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+++.. .-..|||..||+.+- +..|+.+++|.|.
T Consensus 284 ~~~~~~~~C~~~i~~~~~~ilG~~fl~~~y-~vfD~~~~~igfA 326 (339)
T 3fv3_A 284 VYQNGDGTCLWGIQPSDDTILGDNFLRHAY-LLYNLDANTISIA 326 (339)
T ss_dssp EEECSSSCEEESEEECSSCEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred eeeCCCCeEEEEEEeCCcEEeChHHHhCEE-EEEECCCCEEEEE
Confidence 11100 124799999999999 5899999999985
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=93.47 E-value=0.16 Score=46.20 Aligned_cols=101 Identities=11% Similarity=0.095 Sum_probs=63.3
Q ss_pred EEEcCE---eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCc-eEeec-ceeeeEEEEEeceeEEEeE---E
Q 036248 193 AKINNK---PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE-RIRSE-GHCSKVKFEMQGVGFEADF---H 264 (301)
Q Consensus 193 ~~v~~~---~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~-~~~~~~~~~~~~~~~~~~~---~ 264 (301)
+.|+|. ...++||||++..++..+.+..+.-..... ..-..|. .+.+. ...+.+.+.++|..+.+.. +
T Consensus 322 I~Vgg~~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~----~~~~~g~y~v~C~~~~~P~itf~fgg~~i~lp~~~yi 397 (451)
T 3qvc_A 322 VHFGNVSSKKANVILDSATSVITVPTEFFNQFVESASVF----KVPFLSLYVTTCGNTKLPTLEYRSPNKVYTLEPKQYL 397 (451)
T ss_dssp EEETTEEEEEEEEEECTTBSSEEECHHHHHHHHTTTTCE----ECTTSSCEEEETTCTTCCCEEEEETTEEEEECHHHHE
T ss_pred EEECCccCCCceEEEeCCCccccCCHHHHHHHHHHcCCe----ecCCCCeEEeeCCcCcCCcEEEEECCEEEEEcHHHhe
Confidence 455653 457999999999999999888764322100 0000121 12222 2234677777776665421 1
Q ss_pred --------------EecCC--CCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 265 --------------ILDFS--RADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 265 --------------v~~~~--~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+.+.. +-..|||..||+.+-. ..|+.+++|.|.
T Consensus 398 ~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~Yv-VfD~~n~rIGfA 446 (451)
T 3qvc_A 398 EPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFT-VYDYDNHTVGFA 446 (451)
T ss_dssp EECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEE-EEETTTTEEEEE
T ss_pred eecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEE-EEECCCCEEEEE
Confidence 12222 3458999999999995 899999999884
No 29
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=93.38 E-value=0.25 Score=43.83 Aligned_cols=98 Identities=14% Similarity=0.173 Sum_probs=62.5
Q ss_pred EEcCEe------EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe--
Q 036248 194 KINNKP------LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD-- 262 (301)
Q Consensus 194 ~v~~~~------v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~-- 262 (301)
.|+|+. ..++||||.+..++..+.+..+.-.... .. .+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 252 ~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a---~~---~~g~~~v~C~~~~~~P~i~f~~~g~~~~l~~~ 325 (383)
T 2x0b_A 252 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGA---KK---RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSA 325 (383)
T ss_dssp EESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTC---EE---CSSCEEEEGGGTTTCCCEEEEETTEEEEECHH
T ss_pred EeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCC---cc---cCCcEEEeccccccCceEEEEECCEEEEECHH
Confidence 566654 5799999999999999888776322210 00 22321 22221 23457777777666431
Q ss_pred -------------EE--EecC-----CCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 -------------FH--ILDF-----SRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 -------------~~--v~~~-----~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+. +.+. .+-..|||..||+.+-. ..|+.+++|.|.
T Consensus 326 ~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~-vfD~~~~rIGfA 380 (383)
T 2x0b_A 326 DYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYT-EFDRRNNRIGFA 380 (383)
T ss_dssp HHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred HhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEE-EEECCCCEEeEE
Confidence 11 1111 13468999999999995 899999999885
No 30
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=93.25 E-value=0.24 Score=43.03 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=61.5
Q ss_pred EEcCEe------EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCceEeecc--eeeeEEEEEeceeEEEeE--
Q 036248 194 KINNKP------LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGERIRSEG--HCSKVKFEMQGVGFEADF-- 263 (301)
Q Consensus 194 ~v~~~~------v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~-- 263 (301)
.|++.. ..++||||.+..++..+.+..+.-..... . ..+|-.+.+.. ..+.+.+.++|..+.+..
T Consensus 209 ~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~-~~~g~~~~C~~~~~~p~i~f~f~g~~~~l~~~~ 283 (341)
T 3k1w_A 209 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK----K-RLFDYVVKCNEGPTLPDISFHLGGKEYTLTSAD 283 (341)
T ss_dssp EETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----E-CSSCEEEEGGGGGGCCCEEEEETTEEEEECHHH
T ss_pred EECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCe----e-cCCCeEEeCCCCCcCCcEEEEECCEEEEECHHH
Confidence 556653 47999999999999998877763221100 0 01121122221 224567777776654321
Q ss_pred -------------E--Eec-----CCCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 264 -------------H--ILD-----FSRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 264 -------------~--v~~-----~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
. +.. ..+-..|||..||+.+-. ..|+.+++|.|.
T Consensus 284 ~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~-vfD~~~~~igfA 337 (341)
T 3k1w_A 284 YVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYT-EFDRRNNRIGFA 337 (341)
T ss_dssp HBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred heeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEE-EEeCCCCEEEEE
Confidence 1 111 113468999999999994 899999999885
No 31
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=93.08 E-value=0.19 Score=43.78 Aligned_cols=102 Identities=17% Similarity=0.268 Sum_probs=60.2
Q ss_pred EEEcC-EeE----EEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCc-eEeec--ceeeeEEEEEeceeEEEe--
Q 036248 193 AKINN-KPL----SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE-RIRSE--GHCSKVKFEMQGVGFEAD-- 262 (301)
Q Consensus 193 ~~v~~-~~v----~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~--~~~~~~~~~~~~~~~~~~-- 262 (301)
+.|++ +.+ .++||||.+..++..+.+..+.-.... ......|. .+.+. ...+.+.+.++|..+.+.
T Consensus 195 i~v~~~~~l~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a----~~~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~ 270 (340)
T 1wkr_A 195 IRYGSSTSILSSTAGIVDTGTTLTLIASDAFAKYKKATGA----VADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTAN 270 (340)
T ss_dssp EEETTTEEEEEEEEEEECTTBCSEEECHHHHHHHHHHHTC----EECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTG
T ss_pred EEECCCeEccCCCeEEEeCCcccccCCHHHHHHHHHhhCC----EEcCCCCeEEeeccccccCCcEEEEECCEEEEEcHH
Confidence 45666 544 799999999999999988876211110 00000111 11111 112345566666554421
Q ss_pred ------------------E--EEecCC-----CCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 ------------------F--HILDFS-----RADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 ------------------~--~v~~~~-----~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+ .+.+.. +...|||..||+.+- +..|+.+++|.|..
T Consensus 271 ~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 331 (340)
T 1wkr_A 271 AQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFY-SVYDTTNKRLGLAT 331 (340)
T ss_dssp GGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEE-EEEETTTTEEEEEE
T ss_pred HhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheE-EEEeCCCCeEEEEe
Confidence 1 112211 235899999999999 48999999999853
No 32
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=92.85 E-value=0.24 Score=42.94 Aligned_cols=97 Identities=19% Similarity=0.282 Sum_probs=56.9
Q ss_pred EEEcCEeE----EEEEcCCCCccccCHHHHHHcCcceecccceEEEEecC-ce--EeecceeeeEEEEE-eceeEEEe--
Q 036248 193 AKINNKPL----SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG-ER--IRSEGHCSKVKFEM-QGVGFEAD-- 262 (301)
Q Consensus 193 ~~v~~~~v----~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~~--~~~~~~~~~~~~~~-~~~~~~~~-- 262 (301)
+.|+|+.+ .++||||++..++..+.+..+.-..... .. ..+ .. +.+. ..+.+.+.+ +|..+.+.
T Consensus 202 i~v~g~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~----~~-~~~~~~~~~~C~-~~p~i~f~f~~g~~~~i~~~ 275 (334)
T 1j71_A 202 INFDGTSVSTNADVVLDSGTTITYFSQSTADKFARIVGAT----WD-SRNEIYRLPSCD-LSGDAVFNFDQGVKITVPLS 275 (334)
T ss_dssp EEETTEEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCE----EE-TTTTEEECSSSC-CCSEEEEEESTTCEEEEEGG
T ss_pred EEECCEeccCCccEEEeCCCCcEecCHHHHHHHHHHcCCc----cc-CCCceEEEEcCC-CCCceEEEEcCCcEEEECHH
Confidence 36777543 5899999999999999887753221100 00 111 10 1111 123444555 34433321
Q ss_pred -----------EE--EecCCCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 -----------FH--ILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 -----------~~--v~~~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+. +.+ . -..|||..||+.+- +..|+.+++|.|.
T Consensus 276 ~y~~~~~~~~~C~~~i~~-~-~~~iLG~~fl~~~y-~vfD~~~~~igfA 321 (334)
T 1j71_A 276 ELILKDSDSSICYFGISR-N-DANILGDNFLRRAY-IVYDLDDKTISLA 321 (334)
T ss_dssp GGEEECSSSSCEEESEEE-C-TTCEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred HheeecCCCCeeEEEEeE-C-CCcEEChHhhccEE-EEEECCCCEEEEE
Confidence 11 111 1 25799999999999 4899999999985
No 33
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=92.79 E-value=0.44 Score=41.22 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=60.4
Q ss_pred EEcCE-----eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-EeecceeeeEEEEEeceeEEEe-----
Q 036248 194 KINNK-----PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEGHCSKVKFEMQGVGFEAD----- 262 (301)
Q Consensus 194 ~v~~~-----~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~----- 262 (301)
.|+|+ ...++||||.+..++..+.++.+.-.... ......+|.. +.+....+.+.+.++|..+.+.
T Consensus 202 ~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~---a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~ip~~~~~ 278 (329)
T 1oew_A 202 AVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSG---AKSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYID 278 (329)
T ss_dssp EETTSCCEEEEEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHE
T ss_pred EECCeeccCCCceEEEeCCCCCEECCHHHHHHHHHhCCC---cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHee
Confidence 55653 45799999999999999988776322110 0000011111 2222222445666665554321
Q ss_pred ----------EE--EecCC-CCcEEecHHHHhhcCCeEeec-cceEEEEEe
Q 036248 263 ----------FH--ILDFS-RADAVLGVQWLEKLGKIITDH-KALTMEFTY 299 (301)
Q Consensus 263 ----------~~--v~~~~-~~d~ILG~dwL~~~~~i~id~-~~~~~~~~~ 299 (301)
+. +.+.. .-..|||..||+.+- +..|+ .+++|.|..
T Consensus 279 ~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y-~vfD~~~~~riGfA~ 328 (329)
T 1oew_A 279 FGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAF-VVFNGATTPTLGFAS 328 (329)
T ss_dssp EEESSTTCSEEEESEEESTTTSSEEECHHHHTTEE-EEEECSSSCEEEEEE
T ss_pred eeecCCCCCeEEEEEEeCCCCCceEEChHHhcCEE-EEEECCCCceEEEec
Confidence 11 11122 246899999999999 48999 999999864
No 34
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=92.66 E-value=0.48 Score=41.06 Aligned_cols=98 Identities=21% Similarity=0.344 Sum_probs=55.5
Q ss_pred EEcCEe-----EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCc---eEeecceeeeEEEEEe-ceeEEEe--
Q 036248 194 KINNKP-----LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE---RIRSEGHCSKVKFEMQ-GVGFEAD-- 262 (301)
Q Consensus 194 ~v~~~~-----v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~---~~~~~~~~~~~~~~~~-~~~~~~~-- 262 (301)
.|+|+. ..++||||.+..++..+.+..+.-..... ......|. .+.+. ..+.+.+.++ |..+.+.
T Consensus 202 ~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~---~~~~~~~~~~~~~~C~-~~p~i~f~f~~g~~~~vp~~ 277 (342)
T 3pvk_A 202 EVSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGK---LTQDSNGNSFYEVDCN-LSGDVVFNFSKNAKISVPAS 277 (342)
T ss_dssp EETTEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCE---EEECTTSCEEEEECSC-CCSEEEEEESTTCEEEEEGG
T ss_pred EECCEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCe---ecccCCCceEEEEecC-CCCceEEEECCCCEEEEcHH
Confidence 567754 46999999999999999877753221100 00000010 01111 1133444443 3322221
Q ss_pred ------------------EEEecCCCCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 ------------------FHILDFSRADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 ------------------~~v~~~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+.+.+ .-..|||..||+.+- +..|+.+++|.|.
T Consensus 278 ~~~~~~~~~~g~~~~~C~~~i~~--~~~~ilG~~fl~~~y-~vfD~~~~~igfA 328 (342)
T 3pvk_A 278 EFAASLQGDDGQPYDKCQLLFDV--NDANILGDNFLRSAY-IVYDLDDNEISLA 328 (342)
T ss_dssp GGEEC----------CEEESEEE--CTTCEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred HheeeccccCCCcCCeeEEEEee--CCCeEeCHHHHhcEE-EEEECCCCEEEEE
Confidence 11111 124699999999999 5899999999985
No 35
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=92.62 E-value=0.2 Score=43.40 Aligned_cols=99 Identities=16% Similarity=0.181 Sum_probs=61.0
Q ss_pred EEcCEe-------EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe-
Q 036248 194 KINNKP-------LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD- 262 (301)
Q Consensus 194 ~v~~~~-------v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~- 262 (301)
.|+|+. ..++||||++..++..+.+..+.-...... ..+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 199 ~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~-----~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~ 273 (329)
T 1htr_B 199 LIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE-----DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPP 273 (329)
T ss_dssp EETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE-----CTTSCEEECGGGGGGSCCEEEEETTEEEEECH
T ss_pred EECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCee-----cCCCeEEEeCCCcccCCcEEEEECCEEEEECH
Confidence 667654 469999999999999988777632211000 012211 12221 23456667776655432
Q ss_pred ----------EE--EecC-----CCC-cEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 ----------FH--ILDF-----SRA-DAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 ----------~~--v~~~-----~~~-d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+. +.+. .+- ..|||..||+.+- +..|+.+++|.|.
T Consensus 274 ~~y~~~~~g~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~y-vvfD~~~~~igfa 326 (329)
T 1htr_B 274 SSYILSNNGYCTVGVEPTYLSSQNGQPLWILGDVFLRSYY-SVYDLGNNRVGFA 326 (329)
T ss_dssp HHHEEECSSCEEESEEEECCCCTTSSCEEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred HHhcccCCCEEEEEEEECCCCCCCCCceEEEChHHhccEE-EEEECCCCEEEEE
Confidence 11 2221 122 5899999999999 4899999999885
No 36
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=92.47 E-value=0.49 Score=40.76 Aligned_cols=102 Identities=14% Similarity=0.104 Sum_probs=61.1
Q ss_pred EEcC---EeEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-EeecceeeeEEEEEeceeEEEe-------
Q 036248 194 KINN---KPLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEGHCSKVKFEMQGVGFEAD------- 262 (301)
Q Consensus 194 ~v~~---~~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~------- 262 (301)
.|+| ....++||||.+..++..+.+..+.-.... ......+|.. +.+....+.+.+.++|..+.+.
T Consensus 199 ~v~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~---a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~l~~~~~~~~ 275 (323)
T 1bxo_A 199 TAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSG---AQQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYG 275 (323)
T ss_dssp EETTEEEEEEEEEECTTCSSEEECHHHHHHHHTTSTT---CEEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEE
T ss_pred EECCccCCCceEEEeCCCCceeCCHHHHHHHHHhCCC---ceEcCcCCEEEEECCCCCceEEEEECCEEEEECHHHeEEe
Confidence 4555 345799999999999999988776332210 0000011211 1222223456666666555431
Q ss_pred -------EE--EecCC-CCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 -------FH--ILDFS-RADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 -------~~--v~~~~-~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+.. .-..|||..||+.+-. ..|+.+++|.|..
T Consensus 276 ~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~-vfD~~~~riGfA~ 321 (323)
T 1bxo_A 276 PSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYV-VFDSDGPQLGFAP 321 (323)
T ss_dssp ECSSSSCEEESEEECTTCSSEEECHHHHTTEEE-EEETTTTEEEEEE
T ss_pred ccCCCCeEEEEEECCCCCCcEEEChHHHcCEEE-EEECCCCEEEEec
Confidence 11 11221 2458999999999994 8999999998853
No 37
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=92.47 E-value=0.23 Score=42.89 Aligned_cols=101 Identities=15% Similarity=0.119 Sum_probs=59.8
Q ss_pred EEcCE-----eEEEEEcCCCCccccCHHHHHHcCccee-cccceEEEEecCc-eEeecceeeeEEEEEeceeEEEe----
Q 036248 194 KINNK-----PLSVLIDTGSTHNYLHPRLAHFLHLAIE-KTMSFLVAVGNGE-RIRSEGHCSKVKFEMQGVGFEAD---- 262 (301)
Q Consensus 194 ~v~~~-----~v~~liDsGAs~~~i~~~~~~~~~~~~~-~~~~~~v~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~---- 262 (301)
.|+|+ ...++||||++..++..+.+..+.-... .... ..+|. .+.+....+.+.+.++|..+.+.
T Consensus 198 ~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~----~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~ 273 (325)
T 1ibq_A 198 SIGDGSSSSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQES----YEAGGYVFSCSTDLPDFTVVIGDYKAVVPGKYI 273 (325)
T ss_dssp EETTSCCBSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCC----SSSSSCEEETTCCCCCEEEEETTEEEEECHHHH
T ss_pred EECCeeccCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEc----CcCCeEEEEcCCCCCcEEEEECCEEEEECHHHh
Confidence 55553 4579999999999999998887632221 0000 00111 12222222345555555544321
Q ss_pred -----------EE--EecCC-CCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 -----------FH--ILDFS-RADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 -----------~~--v~~~~-~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+. +.+.. .-..|||..||+.+-. ..|+.+++|.|..
T Consensus 274 ~~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~-vfD~~~~~igfA~ 323 (325)
T 1ibq_A 274 NYAPVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYV-VFNSEGPKLGFAA 323 (325)
T ss_dssp EEEESSTTCSEEEESEEECTTTCSEEECHHHHTTEEE-EEETTTTEEEEEE
T ss_pred cccccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEE-EEECCCCEEEeee
Confidence 11 11222 2458999999999994 8999999998853
No 38
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=92.43 E-value=0.64 Score=41.02 Aligned_cols=101 Identities=11% Similarity=0.161 Sum_probs=60.1
Q ss_pred EEEcCE---eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc-eeeeEEEEEeceeEEEe-----
Q 036248 193 AKINNK---PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG-HCSKVKFEMQGVGFEAD----- 262 (301)
Q Consensus 193 ~~v~~~---~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~-~~~~~~~~~~~~~~~~~----- 262 (301)
+.|+|+ ...++||||.+..++..+.+..+.-..... ....+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 247 i~v~g~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~~~g~~~~~C~~~~~P~i~f~f~g~~~~l~~~~yi 322 (375)
T 1miq_A 247 VHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI----KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEPEYYM 322 (375)
T ss_dssp EEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCE----ECTTSSCEEEETTCTTCCCEEEECSSCEEEECGGGSE
T ss_pred EEECCEEcccceEEecCCCccEEcCHHHHHHHHHHhCCc----ccCCCCeEEEECCCCCCCcEEEEECCEEEEECHHHhE
Confidence 667775 457999999999999999887653221100 00011111 11111 12345555555444321
Q ss_pred ----------E--EEecCC--CCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 ----------F--HILDFS--RADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 ----------~--~v~~~~--~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+ .+.+.. .-..|||..||+.+- +..|+.+++|.|.
T Consensus 323 ~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~y-vvfD~~~~riGfA 371 (375)
T 1miq_A 323 NPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYF-TVFDYDKESVGFA 371 (375)
T ss_dssp EESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEE-EEEETTTTEEEEE
T ss_pred eeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEE-EEEECCCCEEEEE
Confidence 1 112222 246899999999999 4899999999985
No 39
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=92.33 E-value=0.42 Score=43.41 Aligned_cols=100 Identities=11% Similarity=0.157 Sum_probs=62.9
Q ss_pred EEEcCE---eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecC-c-eEeecc-eeeeEEEEEeceeEEEe----
Q 036248 193 AKINNK---PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG-E-RIRSEG-HCSKVKFEMQGVGFEAD---- 262 (301)
Q Consensus 193 ~~v~~~---~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~-~~~~~~-~~~~~~~~~~~~~~~~~---- 262 (301)
+.|+|. ...++||||++..++..+.+..+.-..... ...+| . .+.+.. ..+.+.+.++|..+.+.
T Consensus 323 I~Vgg~~~~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~-----~~~~g~~~~v~C~~~~~P~itf~fgg~~~~l~~~~y 397 (453)
T 2bju_A 323 AHVGNIMLEKANCIVDSGTSAITVPTDFLNKMLQNLDVI-----KVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYY 397 (453)
T ss_dssp EEETTEEEEEEEEEECTTCCSEEECHHHHHHHTTTSSCE-----ECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHH
T ss_pred EEECcEEeccccEEEcCCCCeEecCHHHHHHHHHHhCCc-----ccCCCceEEEecCCCCCCcEEEEECCEEEEECHHHh
Confidence 445662 257999999999999999998875433210 01122 1 122221 23456677776655431
Q ss_pred -----------EE--EecCC--CCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 -----------FH--ILDFS--RADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 -----------~~--v~~~~--~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
|. +.+.. .-..|||..||+.+-. ..|..+++|.|.
T Consensus 398 i~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yv-VFD~~n~rIGfA 447 (453)
T 2bju_A 398 LQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFT-VFDYDNHSVGIA 447 (453)
T ss_dssp EEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEE-EEETTTTEEEEE
T ss_pred EeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEE-EEECCCCEEEEE
Confidence 11 22222 2368999999999994 899999999985
No 40
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=92.32 E-value=0.24 Score=43.42 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=58.8
Q ss_pred EEcCEeE------EEE-EcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--ee-eeEEEEE--e-----
Q 036248 194 KINNKPL------SVL-IDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HC-SKVKFEM--Q----- 255 (301)
Q Consensus 194 ~v~~~~v------~~l-iDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~-~~~~~~~--~----- 255 (301)
.|+|+.+ .++ ||||++..++..+.+..+.-..... . ...+|.. +.+.. .. +.+.+.+ +
T Consensus 219 ~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~--~--~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~ 294 (361)
T 1mpp_A 219 KIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPD--A--TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSD 294 (361)
T ss_dssp EETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTT--C--EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSC
T ss_pred EECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCc--c--cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCC
Confidence 5677543 589 9999999999998887653221110 0 0111211 11111 12 3455555 4
Q ss_pred ceeEEEe--------------E--EEecCCCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 256 GVGFEAD--------------F--HILDFSRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 256 ~~~~~~~--------------~--~v~~~~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+..+.+. + .+.+..+-..|||..||+.+- +..|+.+++|.|..
T Consensus 295 g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~y-vvfD~~~~~igfa~ 353 (361)
T 1mpp_A 295 TIDVSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFV-NVYDFGKNRIGFAP 353 (361)
T ss_dssp EEEEEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEE-EEEETTTTEEEEEE
T ss_pred CeEEEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEE-EEEECCCCEEEEEE
Confidence 4433321 1 112222346899999999999 48999999999853
No 41
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=92.28 E-value=0.39 Score=42.86 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=52.2
Q ss_pred EEEcCCCCccccCHHHHHHcCcceecc-cce-EEE-Eec-CceEeecc--eeeeEEEEEece---eEEEe----------
Q 036248 202 VLIDTGSTHNYLHPRLAHFLHLAIEKT-MSF-LVA-VGN-GERIRSEG--HCSKVKFEMQGV---GFEAD---------- 262 (301)
Q Consensus 202 ~liDsGAs~~~i~~~~~~~~~~~~~~~-~~~-~v~-~~~-g~~~~~~~--~~~~~~~~~~~~---~~~~~---------- 262 (301)
++||||.+..++..+.+..+.-..... ... .+. ... +-...+.. ..+.+.+.++|. .+.+.
T Consensus 262 aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~ 341 (403)
T 3aup_A 262 TMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP 341 (403)
T ss_dssp EEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC--
T ss_pred EEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC
Confidence 999999999999998877653222100 000 000 000 00111111 123455555442 33211
Q ss_pred ---E-EEecCC---CCcEEecHHHHhhcCCeEeeccceEEEE
Q 036248 263 ---F-HILDFS---RADAVLGVQWLEKLGKIITDHKALTMEF 297 (301)
Q Consensus 263 ---~-~v~~~~---~~d~ILG~dwL~~~~~i~id~~~~~~~~ 297 (301)
+ .+++.. .-..|||..||+.+- +..|..+++|.|
T Consensus 342 ~~~C~~~~~~~~~~~~~~ILG~~fl~~~y-vvfD~~~~rIGf 382 (403)
T 3aup_A 342 GVTCLGVMNGGMQPRAEITLGARQLEENL-VVFDLARSRVGF 382 (403)
T ss_dssp -CEEECEEECCSCCSSSEEECHHHHTTSC-EEEETTTTEEEE
T ss_pred CeEEEEEEcCCCCCCCcEEEChHHhcCeE-EEEECCCCEEEE
Confidence 1 122222 135899999999999 589999999998
No 42
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=92.24 E-value=0.4 Score=41.48 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=57.1
Q ss_pred eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-EeecceeeeEEEEEeceeEEEe---------------
Q 036248 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEGHCSKVKFEMQGVGFEAD--------------- 262 (301)
Q Consensus 199 ~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~--------------- 262 (301)
...++||||.+..++..+.+..+.-.... ......+|.. +.+....+.+.+.++|..+.+.
T Consensus 213 ~~~aiiDSGTt~~~lp~~~~~~i~~~i~~---a~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~ 289 (329)
T 3c9x_A 213 SIDGIADTGTTLLLLDDNVVDAYYANVQS---AQYDNQQEGVVFDCDEDLPSFSFGVGSSTITIPGDLLNLTPLEEGSST 289 (329)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTTCTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECGGGGEEEESSTTCSE
T ss_pred CceEEEECCCCcEeCCHHHHHHHHHhCCC---cEEcCCCCEEEEECCCCCCcEEEEECCEEEEECHHHeeeeccCCCCCe
Confidence 45799999999999999988776322210 0000001111 1222222345555555444321
Q ss_pred EE--EecCC-CCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 FH--ILDFS-RADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 ~~--v~~~~-~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
++ +.+.. .-..|||..||+.+- +..|..+++|.|..
T Consensus 290 C~~~i~~~~~~~~~ILG~~fl~~~y-~vfD~~~~riGfA~ 328 (329)
T 3c9x_A 290 CFGGLQSSSGIGINIFGDVALKAAL-VVFDLGNERLGWAQ 328 (329)
T ss_dssp EEESEEECTTTTSEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred EEEEEEcCCCCCcEEEChHHhccEE-EEEECCCCEEeEec
Confidence 11 12222 245899999999999 48999999999864
No 43
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=92.19 E-value=0.19 Score=43.81 Aligned_cols=103 Identities=14% Similarity=0.296 Sum_probs=58.7
Q ss_pred EEEcCEeE----EEEEcCCCCccccCHHHHHHcCcceecccceEEEEecC-c-eEeecceeeeEEEEE-eceeEEEe---
Q 036248 193 AKINNKPL----SVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNG-E-RIRSEGHCSKVKFEM-QGVGFEAD--- 262 (301)
Q Consensus 193 ~~v~~~~v----~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g-~-~~~~~~~~~~~~~~~-~~~~~~~~--- 262 (301)
+.|+|+.+ .++||||++..++..+.+..+.-..... ....-..+ . .+.+. ..+.+.+.+ +|..+.+.
T Consensus 202 i~v~g~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~--~~~~~~~~~~~~~~C~-~~p~i~f~f~~g~~~~i~~~~ 278 (342)
T 2qzx_A 202 VNVRGRNVDANTNVLLDSGTTISYFTRSIVRNILYAIGAQ--MKFDSAGNKVYVADCK-TSGTIDFQFGNNLKISVPVSE 278 (342)
T ss_dssp EEETTEEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCE--EEECTTSCEEEEECTT-CCCEEEEEETTTEEEEEEGGG
T ss_pred EEECCEecCCCcCEEEeCCCCCEEcCHHHHHHHHHHhCCe--eeeccCCCcEEEEECC-CCCcEEEEECCCcEEEEcHHH
Confidence 36777644 5899999999999999887763221100 00000001 0 11111 124455565 45444331
Q ss_pred EEEe--------------cC-CCCcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 263 FHIL--------------DF-SRADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 263 ~~v~--------------~~-~~~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
+++- .. ..-..|||..||+.+- +..|+.+++|.|..
T Consensus 279 ~~~~~~~~~~~~~~~C~~~i~~~~~~iLG~~fl~~~y-~vfD~~~~~igfA~ 329 (342)
T 2qzx_A 279 FLFQTYYTSGKPFPKCEVRIRESEDNILGDNFLRSAY-VVYNLDDKKISMAP 329 (342)
T ss_dssp GEECCBCTTSCBCSSEEESEEECSSCEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred hcccccccCCCCCCccEEEEecCCCcEeChHhhhcEE-EEEECCCCEEEEEe
Confidence 1110 00 0125799999999999 58999999999853
No 44
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=91.58 E-value=0.69 Score=39.83 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=58.5
Q ss_pred eEEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCc-eEeecceeeeEEEEEeceeEEEe-------------EE
Q 036248 199 PLSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGE-RIRSEGHCSKVKFEMQGVGFEAD-------------FH 264 (301)
Q Consensus 199 ~v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 264 (301)
...++||||.+..++..+.+..+.-.... ......+|. .+.+....+.+.+.++|..+.+. +.
T Consensus 208 ~~~aiiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~~~g~~~~~C~~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~ 284 (323)
T 1izd_A 208 SITGIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQTF 284 (323)
T ss_dssp CEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEEE
T ss_pred CceEEEeCCCcceeCCHHHHHHHHHhCCC---cEEcCcCCEEEEECCCCCceEEEEECCEEEecCHHHeEEecCCCCeEE
Confidence 45799999999999999988876322210 000001111 11222223456666666555431 11
Q ss_pred --EecCC-CCcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 265 --ILDFS-RADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 265 --v~~~~-~~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
+.+.. .-..|||..||+.+-. ..|+.+++|.|.
T Consensus 285 ~~i~~~~~~~~~IlG~~fl~~~y~-vfD~~~~riGfA 320 (323)
T 1izd_A 285 GGIQSNSGIGFSIFGDVFLKSQYV-VFDASGPRLGFA 320 (323)
T ss_dssp ESEEECTTTSSEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred EEEEcCCCCCcEEEChHHhcCEEE-EEECCCCEEEEe
Confidence 22222 2468999999999994 899999999885
No 45
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=90.37 E-value=0.89 Score=40.14 Aligned_cols=27 Identities=19% Similarity=0.252 Sum_probs=24.0
Q ss_pred cEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 272 DAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 272 d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
-.|||..||+.+- +..|..+++|.|..
T Consensus 345 ~~ILGd~fl~~~y-vvfD~~~~riGfA~ 371 (381)
T 1t6e_X 345 AVILGGAQMEDFV-LDFDMEKKRLGFSR 371 (381)
T ss_dssp SEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred eEEEChHHhCCcE-EEEECCCCEEEEec
Confidence 4899999999999 58999999999853
No 46
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=90.32 E-value=0.19 Score=45.71 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=24.3
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
-..|||..||+.+- +..|+.+++|.|.
T Consensus 391 ~~~ILG~~fl~~~y-vvfD~~~~rIGfA 417 (455)
T 3lpj_A 391 TGTVMGAVIMEGFY-VVFDRARKRIGFA 417 (455)
T ss_dssp SCEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred CcEEEChHHhCCeE-EEEECCCCEEEEE
Confidence 45899999999999 5899999999985
No 47
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=90.26 E-value=0.5 Score=41.65 Aligned_cols=93 Identities=16% Similarity=0.251 Sum_probs=57.0
Q ss_pred EEEEEcCCCCccccCHHHHHHcCcceecccceEEEEecCce-Eeecc--eeeeEEEEEeceeEEEe--------------
Q 036248 200 LSVLIDTGSTHNYLHPRLAHFLHLAIEKTMSFLVAVGNGER-IRSEG--HCSKVKFEMQGVGFEAD-------------- 262 (301)
Q Consensus 200 v~~liDsGAs~~~i~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~~~~--~~~~~~~~~~~~~~~~~-------------- 262 (301)
..++||||.+..++..+.+..+.-..... ...+|.. +.+.. ..+.+.+.++|..+.+.
T Consensus 254 ~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-----~~~~g~~~v~C~~~~~lP~i~f~~~g~~~~l~~~~yi~~~~~~C~~ 328 (370)
T 3psg_A 254 CQAIVDTGTSLLTGPTSAIANIQSDIGAS-----ENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDDDSCTS 328 (370)
T ss_dssp EEEEECTTCCSEEEEHHHHHHHHHHTTCE-----ECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEECSSCEEE
T ss_pred ceEEEcCCCCcEECCHHHHHHHHHHhCCc-----ccCCCcEEEECCCcccCCcEEEEECCEEEEECHHHhcccCCCEEEE
Confidence 46999999999999988877763221100 0112211 12211 22456677777665432
Q ss_pred -EEEecCC--CC-cEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 263 -FHILDFS--RA-DAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 263 -~~v~~~~--~~-d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
|...+.. .- -.|||..||+.+-. ..|+.+++|.|.
T Consensus 329 ~~~~~~~~~~~~~~~ILG~~Fl~~~y~-vfD~~~~riGfA 367 (370)
T 3psg_A 329 GFEGMDVPTSSGELWILGDVFIRQYYT-VFDRANNKVGLA 367 (370)
T ss_dssp SEEEECCCTTSCCEEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred EEEeCCCCCCCCCcEEeChHHhcceEE-EEECCCCEEEEE
Confidence 1111111 12 38999999999995 899999999885
No 48
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=90.13 E-value=0.19 Score=44.85 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=24.3
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
-..|||..||+.+- +..|+.+++|.|.
T Consensus 345 ~~~ILG~~fl~~~y-vvfD~~~~rIGfA 371 (402)
T 3vf3_A 345 TGTVMGAVIMEGFY-VVFDRARKRIGFA 371 (402)
T ss_dssp SCEEECHHHHTTEE-EEEEGGGTEEEEE
T ss_pred CcEEEChHHhCCeE-EEEECCCCEEEEE
Confidence 45899999999999 5899999999985
No 49
>2jyl_A Capsid protein P24 (Ca); HIV-1, carboxy-terminal, dimerization domain, CTD, 3D- NMR, capsid protein (Ca), double mutant; NMR {Human immunodeficiency virus 1} PDB: 2k1c_A* 2l6e_A*
Probab=89.48 E-value=1 Score=31.88 Aligned_cols=67 Identities=10% Similarity=0.184 Sum_probs=47.8
Q ss_pred HHHhcCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhcccC-CCCcHHHHHHHHHH
Q 036248 37 ATLFKLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAIH-KPSNLRDAIALAKL 103 (301)
Q Consensus 37 ~~l~~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~~-~p~tl~~~~~~A~~ 103 (301)
-.+..++| .|+..+|++||-..++.... ..........++.-+++.+..++.. .-.+|++-+..+..
T Consensus 22 ~si~~IkQGpKEPf~dyVdR~~k~l~ae~~~~~vK~~mt~tL~~qNANpdCk~ilk~lg~~~tlee~~~acqg 94 (105)
T 2jyl_A 22 TSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQG 94 (105)
T ss_dssp CCGGGCCCCSSSCHHHHHHHHHHHHHHHCCCTTTTTSCHHHHHHHTSCHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred cchhhhhcCCCCcHHHHHHHHHHHHHHhhcchhhHHHhhhhhhHhhcCcchhhHHHccCCCCCHHHHHHHccc
Confidence 34678899 89999999999988776532 1222344556788899999888754 34688887766544
No 50
>3g1g_A GAG polyprotein, capsid protein; alpha-helical bundle, virion, viral protein, retrovirus; 2.01A {Rous sarcoma virus}
Probab=88.12 E-value=2 Score=28.86 Aligned_cols=66 Identities=15% Similarity=0.197 Sum_probs=49.0
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHHhh--c-CCHHHHHHHHHhcCCHHHHHhcccC-CCCcH-HHHHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNRVT--N-LHPDAILDCFISGLKPTIQNELAIH-KPSNL-RDAIALAKLI 104 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~~~--~-~~e~~~~~~f~~GL~~~i~~~l~~~-~p~tl-~~~~~~A~~~ 104 (301)
|..++| .|+..+|+.||..-...-. . ..+..+....++.=+++.|..++.- .-.++ +|++...+.-
T Consensus 3 ~tdI~QGPkEPF~dfVdRl~kal~~eq~~~~vK~~m~~tLlvQNANpdCk~Il~~~~~~~~~~~e~Ik~~l~~ 75 (87)
T 3g1g_A 3 WADIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDR 75 (87)
T ss_dssp TTTCCCCTTCCHHHHHHHHHHHHHHSSSCGGGHHHHHHHHHHHHSCHHHHHHHHTSCTTCCSHHHHHHHHHHH
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCChHHHHHHHHHH
Confidence 567899 8999999999999776632 1 3555677788889999999988753 33344 8888776653
No 51
>3ds4_A HIV-1 capsid protein; HIV, mutant, polyprotein, complex(viral protein/peptide), mainly alpha; 1.12A {Human immunodeficiency virus 1} PDB: 3dph_A 1a43_A 2xt1_A 2buo_A 3lry_A 2kod_A 3ds1_A 3dtj_A 3ds0_A 3ds5_A 3ds2_A 3ds3_A 2jo0_A 2jyg_A 2xxm_A 2xv6_A 2ont_A 1aum_A 1a8o_A 4arg_B ...
Probab=87.98 E-value=1.7 Score=29.56 Aligned_cols=64 Identities=8% Similarity=0.114 Sum_probs=45.6
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHHhhcC---CHHHHHHHHHhcCCHHHHHhccc-CCCCcHHHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNRVTNL---HPDAILDCFISGLKPTIQNELAI-HKPSNLRDAIALAK 102 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~~~~~---~e~~~~~~f~~GL~~~i~~~l~~-~~p~tl~~~~~~A~ 102 (301)
|..++| .|+..+|+.+|......-..- .........++.-+++.+..++. ..-.+|++.+..+.
T Consensus 5 ~~~i~QGpkEpf~dfv~rl~k~l~~e~~~~~vK~~m~~tL~~qNAnp~Ck~il~~l~~~~~lee~~~aC~ 74 (86)
T 3ds4_A 5 ILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATSEEMMTACQ 74 (86)
T ss_dssp GGGCCCCTTSCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTSCHHHHHHHHHHCTTCCHHHHHHHHT
T ss_pred hhccccCCCCcHHHHHHHHHHHHHHhccchhHHHHHHHhHHHHhccHHHHHHHHccCCCCCHHHHHHHcc
Confidence 567899 899999999999987654321 22344556677779999887764 45567888776553
No 52
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=87.87 E-value=0.63 Score=41.06 Aligned_cols=28 Identities=21% Similarity=0.303 Sum_probs=24.6
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
-..|||..||+.+- +..|+.+++|.|..
T Consensus 326 ~~~ILG~~fl~~~y-vvfD~~~~rIGfA~ 353 (383)
T 2ewy_A 326 NALVIGATVMEGFY-VIFDRAQKRVGFAA 353 (383)
T ss_dssp SCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred CcEEEChHHhCCee-EEEECCCCeEEEEe
Confidence 45899999999999 48999999999853
No 53
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=87.60 E-value=1.8 Score=39.20 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=52.3
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHH-----HcC-cceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAH-----FLH-LAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~-----~~~-~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...-+. ..+ ..... ..+..+..++|. . .+....=.+.+
T Consensus 141 ~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdGs-~--~G~~~~Dtv~i 217 (453)
T 2bju_A 141 YGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGT-V--SGFFSKDLVTV 217 (453)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGGSCCBCGGGCTTCEEEEEEEEEECSSSE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCCCCcCCCccCCceeECCcEEEEEcCCCC-e--EEEEEEEEEEE
Confidence 5556676 78999999999999887543221 111 11111 124566667776 3 34434445677
Q ss_pred eceeEEEeEEEecC----------CCCcEEecHHH
Q 036248 255 QGVGFEADFHILDF----------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~~~~~v~~~----------~~~d~ILG~dw 279 (301)
++......|.+... ..+|.|||+-+
T Consensus 218 g~~~v~~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~ 252 (453)
T 2bju_A 218 GNLSLPYKFIEVIDTNGFEPTYTASTFDGILGLGW 252 (453)
T ss_dssp TTEEEEEEEEEEEECGGGTTHHHHSSCCEEEECSC
T ss_pred eCcEEEEEEEEEEEecccCccccccCCceeEeccC
Confidence 77766555555442 24799999854
No 54
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=87.46 E-value=1.6 Score=39.55 Aligned_cols=87 Identities=18% Similarity=0.240 Sum_probs=52.4
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHH-----HHcC-ccee-------cccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLA-----HFLH-LAIE-------KTMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~-----~~~~-~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...-+ ...+ .... ...+..+..++|. . .+....=.+.+
T Consensus 140 ~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~~~~ydps~SsT~~~~~~~f~i~YgdGs-~--~G~~~~Dtv~i 216 (451)
T 3qvc_A 140 FGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCESKNHYDSSKSKTYEKDDTPVKLTSKAGT-I--SGIFSKDLVTI 216 (451)
T ss_dssp EEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEECSSEE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCCCCCCCCCCCcccccCCCEEEEEECCCE-E--EEEEEEEEEEE
Confidence 4455666 6899999999999988865322 1111 1111 1134556666665 2 33333445677
Q ss_pred eceeEEEeEEEecC----------CCCcEEecHHH
Q 036248 255 QGVGFEADFHILDF----------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~~~~~v~~~----------~~~d~ILG~dw 279 (301)
++......|.+... ..+|.|||+-+
T Consensus 217 gg~~v~~~Fg~a~~t~~~~~~f~~~~~dGILGLg~ 251 (451)
T 3qvc_A 217 GKLSVPYKFIEMTEIVGFEPFYSESDVDGVFGLGW 251 (451)
T ss_dssp TTEEEEEEEEEEEEEEECTTHHHHSCCCEEEECSS
T ss_pred CCEEEEEEEEEEEeccccCCCccCCCCCEEEecCC
Confidence 88776656655543 34799999854
No 55
>1eoq_A GAG polyprotein capsid protein P27; virus/viral protein; NMR {Rous sarcoma virus - prague C} SCOP: a.28.3.1
Probab=87.43 E-value=1.2 Score=30.54 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=47.7
Q ss_pred cCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhcccC--CCCcHHHHHHHHHHH
Q 036248 41 KLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAIH--KPSNLRDAIALAKLI 104 (301)
Q Consensus 41 ~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~~--~p~tl~~~~~~A~~~ 104 (301)
.+|| .|+..+|++||-.-.+.-.. ..-.......++.-+++.+..|+.. .-.|+++++...+..
T Consensus 2 dIkQGPkEPFrDyVdRf~kalraeqa~~~vK~wmt~tLlvQNANPdCk~iLkal~g~~~tl~em~~yi~~~ 72 (96)
T 1eoq_A 2 DIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVLDR 72 (96)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHSCHHHHHHHHHCCSCCCSHHHHHHHHHHH
T ss_pred CcccCCCCcHHHHHHHHHHHHHHhhccHhHhhhhHHHHHHHhcCHHHHHHHHccCCCCCCHHHHHHHHHHH
Confidence 5788 89999999999887776321 1223445677788899999999864 457889988877663
No 56
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=87.32 E-value=3 Score=36.85 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=51.3
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH--------HHHHcCcceec-------ccceEEEEecCceEeecceeeeEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR--------LAHFLHLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKF 252 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~--------~~~~~~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~ 252 (301)
.+.+.|. .+++.+++||||+...|... |...-...... ..+..+..++|. + .+....=.|
T Consensus 64 ~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~Dtv 140 (383)
T 2x0b_A 64 YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGT-V--SGFLSQDII 140 (383)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE-E--EEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCcc-E--EEEEEeeEE
Confidence 4445665 58999999999999887543 22211121111 124566677775 3 333334456
Q ss_pred EEeceeEEEeEEEecC--------CCCcEEecHHH
Q 036248 253 EMQGVGFEADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 253 ~~~~~~~~~~~~v~~~--------~~~d~ILG~dw 279 (301)
.+++......|.+... ..+|.|||+-|
T Consensus 141 ~ig~~~v~~~Fg~a~~~~g~~f~~~~~dGIlGLg~ 175 (383)
T 2x0b_A 141 TVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGF 175 (383)
T ss_dssp EETTEEEEEEEEEEEECCHHHHTTCSSSEEEECSC
T ss_pred EEcCceEEEEEEEEEecCCcccccCCCceEeccCC
Confidence 7777665555544432 25899999854
No 57
>3g21_A GAG polyprotein, capsid protein; alpha-helical bundle, virion, viral protein, retrovirus; 0.90A {Rous sarcoma virus} PDB: 3g1i_A 3g28_A 3g29_A 3g26_A 3g0v_A
Probab=87.05 E-value=1.6 Score=28.67 Aligned_cols=64 Identities=16% Similarity=0.226 Sum_probs=44.8
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhcccC-CCCcH-HHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAIH-KPSNL-RDAIALAK 102 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~~-~p~tl-~~~~~~A~ 102 (301)
|..++| .|+..+|+.||..-...-.. ..+..+....++.=+++.|..++.. .-.++ +|++...+
T Consensus 4 ~tdI~QGPkEPF~dfVdRl~kal~~e~~~~~vk~~m~~tLl~QNANpdCk~ilk~l~~~~~~~~e~ik~~~ 74 (77)
T 3g21_A 4 WADIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVL 74 (77)
T ss_dssp GGGCCCCTTCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHSCHHHHHHHTTSCTTCCSHHHHHHHHH
T ss_pred ccccccCCCccHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHhcCHHHHHHHHhCCCCCCCHHHHHHHHH
Confidence 567899 89999999999987664321 2344556677788899999888753 33344 77776543
No 58
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=85.73 E-value=2 Score=38.37 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=23.4
Q ss_pred cEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 272 DAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 272 d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
-.|||..||+.+- +..|..+++|.|.
T Consensus 371 ~~IlGd~fl~~~~-vvfD~~~~riGfa 396 (413)
T 3vla_A 371 SIVIGGHQLEDNL-VQFDLATSRVGFS 396 (413)
T ss_dssp SEEECHHHHTTEE-EEEETTTTEEEEE
T ss_pred ceeEehhhhcCeE-EEEECCCCEEEEE
Confidence 3699999999999 5899999999985
No 59
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=85.71 E-value=3.7 Score=36.23 Aligned_cols=28 Identities=18% Similarity=0.339 Sum_probs=24.6
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
-..|||..||+.+- +..|..+++|.|..
T Consensus 338 ~~~ILG~~fl~~~y-vvfD~~~~rIGfA~ 365 (395)
T 2qp8_A 338 TGTVMGAVIMEGFY-VVFDRARKRIGFAV 365 (395)
T ss_dssp SCEEECHHHHTTEE-EEEETTTTEEEEEE
T ss_pred CcEEEChHHhCCee-EEEECCCCEEEEEe
Confidence 45899999999999 48999999999853
No 60
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=85.39 E-value=3.5 Score=35.33 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=51.1
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHH---cCcce-e--------cccceEEEEecCceEeecceeeeEEEEEece
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHF---LHLAI-E--------KTMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~---~~~~~-~--------~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~ 257 (301)
.+.+.|..+++.+++||||+...|...-+.. .+.+. . ...+..+..++|.... +....=.|.+++.
T Consensus 18 ~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg~Gs~~~--G~~~~D~v~ig~~ 95 (323)
T 1bxo_A 18 ITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSSAS--GNVFTDSVTVGGV 95 (323)
T ss_dssp EEEEEETTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHCEEEEEEEEEEECTTSCEEE--EEEEEEEEEETTE
T ss_pred EEEEEECCEEEEEEEeCCCcceEEecCCCCchhccCCCCCCcccCCcccCCCeEEEEeCCCCeEE--EEEEEEEEEECCE
Confidence 5667788899999999999998876432111 11111 1 1234566666776432 2222334566665
Q ss_pred eEE-EeEEEecC--------CCCcEEecHHH
Q 036248 258 GFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 258 ~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
... ..|.+... ...|.|||+-+
T Consensus 96 ~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 126 (323)
T 1bxo_A 96 TAHGQAVQAAQQISAQFQQDTNNDGLLGLAF 126 (323)
T ss_dssp EEEEEEEEEEEEECHHHHTCTTCSEEEECSC
T ss_pred EECcEEEEEEEecCcccccCCCCceEEEeCc
Confidence 543 24444331 35899999865
No 61
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=85.34 E-value=4.1 Score=35.11 Aligned_cols=85 Identities=19% Similarity=0.298 Sum_probs=49.7
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHHHcCcce---ecccceEEEEecCceEeecceeeeEEEEEeceeEE-EeE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAHFLHLAI---EKTMSFLVAVGNGERIRSEGHCSKVKFEMQGVGFE-ADF 263 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~~~~~~~---~~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~ 263 (301)
.+.+.|. .+++.+++||||+...|... ....-.. ....+..+..++|. + .+....=.|.+++.... ..|
T Consensus 15 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~--~~y~~s~Ss~~~~~~~~i~Yg~Gs-~--~G~~~~Dtv~~g~~~v~~~~f 89 (340)
T 1wkr_A 15 VVNVGVGSPATTYSLLVDTGSSNTWLGAD--KSYVKTSTSSATSDKVSVTYGSGS-F--SGTEYTDTVTLGSLTIPKQSI 89 (340)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEECSS--SCCCCCTTCEEEEEEEEEECSSCE-E--EEEEEEEEEEETTEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEeCCChhheecCC--CccCCcCCccccCceEEEEECCcE-E--EEEEEEEEEEECCEEEcceEE
Confidence 5566776 78999999999999988643 1111000 11235666777776 3 23333445566665443 234
Q ss_pred EEec----CCCCcEEecHHH
Q 036248 264 HILD----FSRADAVLGVQW 279 (301)
Q Consensus 264 ~v~~----~~~~d~ILG~dw 279 (301)
.+.. ....|.|||+-+
T Consensus 90 g~~~~~~~~~~~~GilGLg~ 109 (340)
T 1wkr_A 90 GVASRDSGFDGVDGILGVGP 109 (340)
T ss_dssp EEEEEEESCTTCSEEEECSC
T ss_pred EEEEccCCCcCCCcEEECCc
Confidence 3332 235899999854
No 62
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=84.54 E-value=2.3 Score=36.52 Aligned_cols=88 Identities=15% Similarity=0.201 Sum_probs=51.4
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHH-----Hc-Cccee------cccceEEEEecCceEeecceeeeEEEEEece
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAH-----FL-HLAIE------KTMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~-----~~-~~~~~------~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~ 257 (301)
.+.+.|..+++.+++||||+...|...-+. .. ..... ...+..+..++|....- ....=.+.+++.
T Consensus 17 ~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg~Gs~~~G--~~~~D~v~ig~~ 94 (325)
T 1ibq_A 17 LTPVTVGKSTLHLDFDTGSADLWVFSDELPSSEQTGHDLYTPSSSATKLSGYSWDISYGDGSSASG--DVYRDTVTVGGV 94 (325)
T ss_dssp EEEEEEBTEEEEEEEETTCCCEEEECTTSCHHHHTTSCCCBCCSSCEECTTCBEEEECSSSCEEEE--EEEEEEEEETTE
T ss_pred EEEEEECCEEEEEEEeCCCccceEeeCCCCccccCCCCCCCchhcCCccCCCEEEEEeCCCCEEEE--EEEEeEEEECCE
Confidence 566678889999999999999887543211 11 11111 12356667777764322 222334566665
Q ss_pred eEE-EeEEEecC--------CCCcEEecHHH
Q 036248 258 GFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 258 ~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
... ..|.+... ..+|.|||+-+
T Consensus 95 ~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (325)
T 1ibq_A 95 TTNKQAVEAASKISSEFVQDTANDGLLGLAF 125 (325)
T ss_dssp EEEEEEEEEEEEECHHHHTSTTCCEEEECSC
T ss_pred EEcceEEEEEEecCccccccCCCceEEEeCc
Confidence 543 23444331 36899999855
No 63
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=84.42 E-value=5.7 Score=33.89 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=49.4
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHH-----HHHcC-cceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRL-----AHFLH-LAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~-----~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...- +...+ ..... ..+..+..++|. . .+....=.+.+
T Consensus 17 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~D~v~i 93 (323)
T 3cms_A 17 FGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS-M--QGILGYDTVTV 93 (323)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccCCCCCCCccCCCeEECCcEEEEEeCCCC-e--EEEEEEEEEEE
Confidence 4555666 589999999999998875321 22221 11111 124566666665 2 33333445666
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ...|.|||+-+
T Consensus 94 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 127 (323)
T 3cms_A 94 SNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAY 127 (323)
T ss_dssp TTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSC
T ss_pred CCeEEeccEEEEEEecccccccccCCceEEecCc
Confidence 776544 34444332 24799999744
No 64
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=84.22 E-value=2.3 Score=36.51 Aligned_cols=88 Identities=17% Similarity=0.307 Sum_probs=50.8
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHH---cCcce-ec--------ccceEEEEecCceEeecceeeeEEEEEece
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHF---LHLAI-EK--------TMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~---~~~~~-~~--------~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~ 257 (301)
.+.+.|..+++.+++||||+...|...-+.. .+.+. .+ ..+..+..++|.... +....=.|.+++.
T Consensus 18 ~~~i~iG~q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~Ss~~~~~~~~~i~Yg~Gs~~~--G~~~~D~v~ig~~ 95 (323)
T 1izd_A 18 ITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSSAS--GDVYKDKVTVGGV 95 (323)
T ss_dssp EEEEEETTEEEEEEEETTCCCEEECBTTSCHHHHTTCCCBCCCTTCEEEEEEEEEEECTTSCEEE--EEEEEEEEEETTE
T ss_pred EEEEEECCEEEEEEEcCCCcceEEecCCCCcccccCCCCCCccccCCccCCCeEEEEcCCCCeEE--EEEEEEEEEECCE
Confidence 5667788899999999999998886542211 11111 11 124455556666332 2222334566666
Q ss_pred eEE-EeEEEecC--------CCCcEEecHHH
Q 036248 258 GFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 258 ~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
... ..|.+... ..+|.|||+-+
T Consensus 96 ~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 126 (323)
T 1izd_A 96 SYDSQAVESAEKVSSEFTQDTANDGLLGLAF 126 (323)
T ss_dssp EEEEEEEEEEEEECHHHHHCTTCCEEEECSC
T ss_pred EECceEEEEEEeccccccccCCCceEEecCc
Confidence 554 34444432 35899999765
No 65
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=82.39 E-value=2.1 Score=37.71 Aligned_cols=84 Identities=18% Similarity=0.351 Sum_probs=49.0
Q ss_pred EEEc--CEeEEEEEcCCCCccccCHHHHH-----Hc-Ccceec-------ccceEEEEecCceEeecceeeeEEEEEece
Q 036248 193 AKIN--NKPLSVLIDTGSTHNYLHPRLAH-----FL-HLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEMQGV 257 (301)
Q Consensus 193 ~~v~--~~~v~~liDsGAs~~~i~~~~~~-----~~-~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~~~~ 257 (301)
+.|. .+++.+++||||+...|...-+. .. ...... ..+..+..++|. + .+....=.|.+++.
T Consensus 68 i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~Dtv~ig~~ 144 (375)
T 1miq_A 68 GEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGT-V--KGFFSKDLVTLGHL 144 (375)
T ss_dssp CEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEE-E--EEEEEEEEEEETTE
T ss_pred EEECCCCeEEEEEEeCCCcceEEccCCCCcccccCCCcCCCccCCceEECCcEEEEEeCCCe-E--EEEEEEEEEEEcCc
Confidence 3555 58899999999999887543221 11 111111 124556666665 2 33333445677776
Q ss_pred eEEEeEEEecC----------CCCcEEecHHH
Q 036248 258 GFEADFHILDF----------SRADAVLGVQW 279 (301)
Q Consensus 258 ~~~~~~~v~~~----------~~~d~ILG~dw 279 (301)
.....|.+... ..+|.|||+-+
T Consensus 145 ~v~~~Fg~~~~~~~~~~~f~~~~~dGilGLg~ 176 (375)
T 1miq_A 145 SMPYKFIEVTDTDDLEPIYSSVEFDGILGLGW 176 (375)
T ss_dssp EEEEEEEEEEECGGGTTHHHHSCCCEEEECSS
T ss_pred eECcEEEEEEeccccccccccCCCceEEeCCC
Confidence 65545554443 35899999865
No 66
>1baj_A GAG polyprotein; capsid, HIV-1 assembly protein, viral protein; 2.60A {Human immunodeficiency virus 1} SCOP: a.28.3.1
Probab=82.27 E-value=2.2 Score=29.95 Aligned_cols=66 Identities=9% Similarity=0.185 Sum_probs=45.4
Q ss_pred HHhcCcc--cccHHHHHHHHHHHHHHhhcCCHH----HHHHHHHhcCCHHHHHhcccC-CCCcHHHHHHHHHHH
Q 036248 38 TLFKLTQ--TSSVEAYQSTFENICNRVTNLHPD----AILDCFISGLKPTIQNELAIH-KPSNLRDAIALAKLI 104 (301)
Q Consensus 38 ~l~~lkQ--~~sv~~Y~~~f~~L~~~~~~~~e~----~~~~~f~~GL~~~i~~~l~~~-~p~tl~~~~~~A~~~ 104 (301)
.+..++| .|+..+|++||-...+... .+.+ ......++.-+++.+..++.. .-.+|++-+..+...
T Consensus 5 s~~~ikQGpkepf~d~v~R~~k~l~~e~-~~~~vK~~~~~tL~~qnanp~Ck~~lk~l~~~~~l~e~~~ac~~v 77 (101)
T 1baj_A 5 SILDIRQGPKEPFRDYVDRFYKTLRAEQ-ASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGV 77 (101)
T ss_dssp GGGGCCCCSSCCHHHHHHHHHHHHHHTT-CCHHHHHHHHHTHHHHTSCHHHHHHHHHHCSSCCHHHHHHHC---
T ss_pred chhhhhcCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHhhhHHHHhhchhhhHHHHccCCCCCHHHHHHhcccc
Confidence 3667899 8999999999988877653 3333 333455677789988887754 446888877766553
No 67
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=81.81 E-value=9.3 Score=32.73 Aligned_cols=87 Identities=16% Similarity=0.242 Sum_probs=50.8
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCH--------HHHHHcCccee-------cccceEEEEecCceEeecceeeeEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHP--------RLAHFLHLAIE-------KTMSFLVAVGNGERIRSEGHCSKVKF 252 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~--------~~~~~~~~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~ 252 (301)
.+.+.|. .+++.+++||||+...|.. .|...-..... ......+..++|. . .+....=.+
T Consensus 21 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~--~G~~~~D~v 97 (341)
T 3k1w_A 21 YGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGT-V--SGFLSQDII 97 (341)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE-E--EEEEEEEEE
T ss_pred EEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEECCcE-E--EEEEEEEEE
Confidence 4455666 5899999999999988853 23211111111 1124566666665 2 344344456
Q ss_pred EEeceeEEEeEEEecC--------CCCcEEecHHH
Q 036248 253 EMQGVGFEADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 253 ~~~~~~~~~~~~v~~~--------~~~d~ILG~dw 279 (301)
.+++......|.+... ..+|.|||+-+
T Consensus 98 ~ig~~~v~~~fg~~~~~~~~~~~~~~~~GilGLg~ 132 (341)
T 3k1w_A 98 TVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGF 132 (341)
T ss_dssp EETTEEEEEEEEEEEECCHHHHTTCSSSEEEECSC
T ss_pred EECCceeeEEEEEEEEccccccccCCcceEEECCc
Confidence 7777766445555432 23699999854
No 68
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=81.74 E-value=7.2 Score=33.12 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=50.8
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH------HHHHcCcceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR------LAHFLHLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~------~~~~~~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|... +...-...... .....+..++|. . .+....=.+.+
T Consensus 14 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs-~--~G~~~~D~v~i 90 (320)
T 4aa9_A 14 FGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGS-M--EGFLGYDTVTV 90 (320)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCCCCCCCCCCCcCeEcCCcEEEEEECCcE-E--EEEEEEEEEEE
Confidence 5556776 58999999999999888542 22111111111 124566666665 2 34434445677
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ..+|.|||+-+
T Consensus 91 g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 91 SNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp TTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred CCEeecCeEEEEEEEcccccccccCcccEEecCc
Confidence 776654 34544432 23699999853
No 69
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=81.19 E-value=6.1 Score=34.59 Aligned_cols=87 Identities=16% Similarity=0.286 Sum_probs=50.7
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHH-----Hc-Cccee-------cccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAH-----FL-HLAIE-------KTMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~-----~~-~~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|....+. .. ..... ......+..++|. + .+....=.|.+
T Consensus 59 ~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~Dtv~i 135 (370)
T 3psg_A 59 FGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGS-M--TGILGYDTVQV 135 (370)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCE-E--EEEEEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECCcEEEEEeCCce-E--EEEEEEEEEee
Confidence 3445565 48999999999999888643221 11 11111 1134566666776 2 33333445677
Q ss_pred eceeEE-EeEEEecCC--------CCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDFS--------RADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~~--------~~d~ILG~dw 279 (301)
++.... ..|.+.... .+|.|||+-+
T Consensus 136 g~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~ 169 (370)
T 3psg_A 136 GGISDTNQIFGLSETEPGSFLYYAPFDGILGLAY 169 (370)
T ss_dssp TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred CCcccCCeEEEEEEeecccccccCCccceeccCC
Confidence 777665 455554432 3799999853
No 70
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=81.09 E-value=6.8 Score=33.56 Aligned_cols=88 Identities=16% Similarity=0.220 Sum_probs=50.7
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHHH-----c-Cccee--------cccceEEEEecCceEeecceeeeEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAHF-----L-HLAIE--------KTMSFLVAVGNGERIRSEGHCSKVKFE 253 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~~-----~-~~~~~--------~~~~~~v~~~~g~~~~~~~~~~~~~~~ 253 (301)
.+.+.|. .+++.+++||||+...|...-+.. . ..... ...+..+..++|.... +....=.|.
T Consensus 18 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~--G~~~~D~v~ 95 (329)
T 3c9x_A 18 ITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSS--GDVYTDKVT 95 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEE--EEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEE--EEEEEEEEE
Confidence 5556777 799999999999998886532111 1 11110 1234666777776432 222333456
Q ss_pred EeceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 254 MQGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 254 ~~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
+++.... ..|.+... ..+|.|||+-+
T Consensus 96 ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 130 (329)
T 3c9x_A 96 IGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAF 130 (329)
T ss_dssp ETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSC
T ss_pred ECCEEEcceEEEEEEecCccccccCCCceeEEeCc
Confidence 6665543 23443331 36899999865
No 71
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=80.75 E-value=6.5 Score=33.67 Aligned_cols=88 Identities=16% Similarity=0.247 Sum_probs=50.1
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHHHc-----Cccee--------cccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAHFL-----HLAIE--------KTMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~~~-----~~~~~--------~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...-+... ..... ......+..++|.... +....=.|.+
T Consensus 18 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~--G~~~~D~v~~ 95 (329)
T 1oew_A 18 ITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVXQTIYTPSKSTTAKLLSGATWSISYGDGSSSS--GDVYTDTVSV 95 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-CCCBCGGGCTTCEEEEEEEEEEECTTSCEEE--EEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEECCCCCCeEEecCCCCccccccCccCCccCccceecCCCeEEEEeCCCCcEE--EEEEEEEEEE
Confidence 5556777 7999999999999988865322211 11111 0123455566676332 2323335566
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ...|.|||+-+
T Consensus 96 g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 129 (329)
T 1oew_A 96 GGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAF 129 (329)
T ss_dssp TTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSC
T ss_pred CCEEEeeeEEEEEEecCccccccCCCceEEEecc
Confidence 666543 24444331 35899999855
No 72
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=80.10 E-value=3.6 Score=35.34 Aligned_cols=87 Identities=18% Similarity=0.140 Sum_probs=48.5
Q ss_pred EEEEEEcCEeEEEEEcCCCCccccCHHHHHH-----cCcce-ecc--------cceEEEEecCceEeecceeeeEEEEEe
Q 036248 190 QLSAKINNKPLSVLIDTGSTHNYLHPRLAHF-----LHLAI-EKT--------MSFLVAVGNGERIRSEGHCSKVKFEMQ 255 (301)
Q Consensus 190 ~i~~~v~~~~v~~liDsGAs~~~i~~~~~~~-----~~~~~-~~~--------~~~~v~~~~g~~~~~~~~~~~~~~~~~ 255 (301)
.+.+.|..+++.+++||||+...|...-+.. ..... .+. .+..+..++|.. .+....=.+.++
T Consensus 20 ~~~i~iG~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~ST~~~~~~~~~i~Yg~Gs~---~G~~~~Dtv~ig 96 (330)
T 1yg9_A 20 AGITKIGNQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKPKYISDGNVQVKFFDTGSA---VGRGIEDSLTIS 96 (330)
T ss_dssp EEEEEETTEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSCEEEEEEEEEEEETTTEEE---EEEEEEEEEEET
T ss_pred EEEEEECCEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCCceEECCCEEEEEECCceE---EEEEEEEEEEEC
Confidence 5667888899999999999998876432210 00011 111 133444445542 233333456666
Q ss_pred ceeEE-EeEEEecC-------CCCcEEecHHH
Q 036248 256 GVGFE-ADFHILDF-------SRADAVLGVQW 279 (301)
Q Consensus 256 ~~~~~-~~~~v~~~-------~~~d~ILG~dw 279 (301)
+.... ..|.+... ..+|.|||+-+
T Consensus 97 ~~~~~~~~fg~~~~~~~~f~~~~~~GilGLg~ 128 (330)
T 1yg9_A 97 QLTTSQQDIVLADELSQEVCILSADVVVGIAA 128 (330)
T ss_dssp TEEEEEEEEEEEEEECTHHHHTTCSEEEECSC
T ss_pred CEEEcCeEEEEEEEcccccccccCceEEEcCc
Confidence 66544 34443332 24799999865
No 73
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=79.80 E-value=9.7 Score=32.49 Aligned_cols=87 Identities=21% Similarity=0.382 Sum_probs=49.3
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH------HHHHcCcceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR------LAHFLHLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~------~~~~~~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|... +...-...... .....+..++|. . .+....=.|.+
T Consensus 16 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~D~v~i 92 (329)
T 1dpj_A 16 YTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGS-L--EGYISQDTLSI 92 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCcCcCCcccCcCeEECCcEEEEEECCce-E--EEEEEEEEEEE
Confidence 4556676 68999999999999887532 22111111111 124556666663 2 34433445666
Q ss_pred eceeEE-EeEEEec--------CCCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILD--------FSRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~--------~~~~d~ILG~dw 279 (301)
++.... ..|.+.. ...+|.|||+-+
T Consensus 93 g~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 126 (329)
T 1dpj_A 93 GDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGY 126 (329)
T ss_dssp TTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSC
T ss_pred CCeEECCeEEEEEEecCccccccCCcceEEEeCC
Confidence 666543 2444332 225899999854
No 74
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=79.78 E-value=7.6 Score=33.58 Aligned_cols=87 Identities=18% Similarity=0.297 Sum_probs=51.0
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHH-----Hc-Cccee-------cccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAH-----FL-HLAIE-------KTMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~-----~~-~~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...-+. .. ..... ...+..+..++|. . .+....=.|.+
T Consensus 26 ~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~D~v~i 102 (351)
T 1tzs_A 26 FGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGS-L--SGIIGADQVSV 102 (351)
T ss_dssp CEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCBCCSCEEEEESSSCE-E--EEEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCCCCcCCcccCcceEECCCEEEEEeCCCC-e--EEEEEEeEEEE
Confidence 5556676 58999999999999888543221 11 11111 1134667777775 2 34333445677
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ..+|.|||+-+
T Consensus 103 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 136 (351)
T 1tzs_A 103 EGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGY 136 (351)
T ss_dssp TTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSC
T ss_pred CCeEECCeEEEEEEeccccccccCCCceEEecCC
Confidence 776654 34544432 24799999754
No 75
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=79.61 E-value=7.7 Score=33.27 Aligned_cols=88 Identities=22% Similarity=0.324 Sum_probs=51.6
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH---H-----------HHHcC-cceec-------ccceEEEEecCceEeecc
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR---L-----------AHFLH-LAIEK-------TMSFLVAVGNGERIRSEG 245 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~---~-----------~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~ 245 (301)
.+.+.|. .+++.+++||||+...|... | +...+ ..... .....+..++|.... +
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~~--G 92 (342)
T 3pvk_A 15 AADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFKIGYGDGSSSQ--G 92 (342)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEEEECSSSCEEE--E
T ss_pred EEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEEEEecCCCeEE--E
Confidence 5556776 68999999999999888422 1 12111 11111 124556667776432 3
Q ss_pred eeeeEEEEEeceeEE-EeEEEecC-CCCcEEecHHH
Q 036248 246 HCSKVKFEMQGVGFE-ADFHILDF-SRADAVLGVQW 279 (301)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~v~~~-~~~d~ILG~dw 279 (301)
....=.+.+++.... ..|.+... ...|.|||+-+
T Consensus 93 ~~~~D~v~ig~~~v~~~~fg~~~~~~~~~GilGLg~ 128 (342)
T 3pvk_A 93 TLYKDTVGFGGVSIKNQVLADVDSTSIDQGILGVGY 128 (342)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred EEEEEEEEECCEEecceEEEEEEccCCCccEEEecC
Confidence 333445667776654 34555443 36899999854
No 76
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=79.61 E-value=11 Score=32.05 Aligned_cols=87 Identities=17% Similarity=0.300 Sum_probs=50.3
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHH-----HHHcC-cceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRL-----AHFLH-LAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~-----~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...- +...+ ..... ..+..+..++|.. .+....=.|.+
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~---~G~~~~D~v~~ 91 (329)
T 1htr_B 15 FGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSL---TGFFGYDTLTV 91 (329)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE---EEEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCCCCcCCCccCCCeEECCcEEEEEeCCCCe---EEEEEeeeEEE
Confidence 4556676 589999999999998875431 22211 11111 1245566666652 33333445677
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ..+|.|||+-+
T Consensus 92 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (329)
T 1htr_B 92 QSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 125 (329)
T ss_dssp TTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCC
T ss_pred cceEECceEEEEEEEccccccccCCCceEEecCC
Confidence 776654 45555442 24789999743
No 77
>1d1d_A Protein (capsid protein); two independent domains helical bundles, virus/viral protein; NMR {Rous sarcoma virus} SCOP: a.28.3.1 a.73.1.1
Probab=79.36 E-value=4 Score=33.87 Aligned_cols=65 Identities=17% Similarity=0.281 Sum_probs=44.5
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHH--hhc-CCHHHHHHHHHhcCCHHHHHhccc----C-CCCcHHHHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNR--VTN-LHPDAILDCFISGLKPTIQNELAI----H-KPSNLRDAIALAKL 103 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~--~~~-~~e~~~~~~f~~GL~~~i~~~l~~----~-~p~tl~~~~~~A~~ 103 (301)
+..+|| .|+..+|++||-+-.+. .+. -.-...++..++.-+++.+..++. . ...+|++-+..++.
T Consensus 175 i~~IkQGPkEpf~dfVdRl~kalrae~~~~~~~~~~~~~~l~qnAnpdck~~lraal~pl~~~~tLee~m~aCq~ 249 (262)
T 1d1d_A 175 WADITQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRAAPSTLTTPGEIIKYVLDRQK 249 (262)
T ss_dssp TTSCCCCSSSCHHHHHHHHHHHHHTSSCCTTTTTHHHHHHHTTSSCHHHHHHHHTSCTTCCSTTHHHHHHHHHHC
T ss_pred HhHhhhcCCCcHHHHHHHHHHHHHhhccCcccchhhHHHHHHHhcCHHHHHHHHHhhhcCCCCCCHHHHHHHHcc
Confidence 567899 89999999999998877 432 222232344556668888887774 3 34678887766543
No 78
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=78.78 E-value=6.2 Score=34.27 Aligned_cols=87 Identities=15% Similarity=0.274 Sum_probs=49.2
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHH------Hc-Ccceec-------ccceEEEEecCceEeecceeeeEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAH------FL-HLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFE 253 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~------~~-~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~ 253 (301)
.+.+.|. .+++.++|||||+...|...-+. .. ...... .....+..++|. + .+....=.|.
T Consensus 21 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~D~v~ 97 (361)
T 1mpp_A 21 AIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGG-A--NGIYFRDSIT 97 (361)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSCE-E--EEEEEEEEEE
T ss_pred EEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCce-E--EEEEEEEEEE
Confidence 5556776 79999999999999988554322 11 111111 124556666776 3 3333334556
Q ss_pred EeceeEE-EeEEEec-------------CCCCcEEecHHH
Q 036248 254 MQGVGFE-ADFHILD-------------FSRADAVLGVQW 279 (301)
Q Consensus 254 ~~~~~~~-~~~~v~~-------------~~~~d~ILG~dw 279 (301)
+++.... ..|.+.. ...+|.|||+-+
T Consensus 98 ~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~ 137 (361)
T 1mpp_A 98 VGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAY 137 (361)
T ss_dssp ETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSC
T ss_pred ECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCC
Confidence 6665543 2343332 124899999854
No 79
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=78.36 E-value=9.2 Score=32.56 Aligned_cols=87 Identities=15% Similarity=0.204 Sum_probs=49.2
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHH-----HHHcC-cceec-------ccceEEEEecCceEeecceeeeEEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRL-----AHFLH-LAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFEM 254 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~-----~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~~ 254 (301)
.+.+.|. .+++.+++||||+...|...- +...+ ..... .....+..++|.. .+....=.+.+
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~---~G~~~~D~v~~ 91 (324)
T 1am5_A 15 YGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGM---RGILGQDTVSV 91 (324)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEE---EEEEEEEEEES
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccCCCcCCCccCCCeEeCCcEEEEEECCCCe---EEEEEECceeE
Confidence 4555665 589999999999998886431 12211 11111 1245566666753 33333445666
Q ss_pred eceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 255 QGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 255 ~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
++.... ..|.+... ..+|.|||+-+
T Consensus 92 g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 92 GGGSDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp SSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred CCcEEcccEEEEEEecccccccCCCCceEEecCC
Confidence 666543 34444331 24799999854
No 80
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=77.84 E-value=16 Score=29.54 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=47.3
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCH-------HHHHHcCcceec-------ccceEEEEecCceEeecceeeeEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHP-------RLAHFLHLAIEK-------TMSFLVAVGNGERIRSEGHCSKVKFE 253 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~-------~~~~~~~~~~~~-------~~~~~v~~~~g~~~~~~~~~~~~~~~ 253 (301)
.+.+.|. .+++.+++||||+...|.. .|...-...... .....+..++|. + .+....=.|.
T Consensus 16 ~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~D~v~ 92 (239)
T 1b5f_A 16 FGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS-I--TGFFSQDSVT 92 (239)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE-E--EEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc-E--EEEEEEEEEE
Confidence 4556676 6899999999999988743 222211111111 123556666665 2 2333333456
Q ss_pred EeceeEE-EeEEEec--------CCCCcEEecHHH
Q 036248 254 MQGVGFE-ADFHILD--------FSRADAVLGVQW 279 (301)
Q Consensus 254 ~~~~~~~-~~~~v~~--------~~~~d~ILG~dw 279 (301)
+++.... ..|.+.. ...+|.|||+-+
T Consensus 93 ~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 127 (239)
T 1b5f_A 93 IGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSF 127 (239)
T ss_dssp ETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSC
T ss_pred ECCcEEccEEEEEEEeccCccccccCcceEEecCc
Confidence 6665433 2232221 135799999743
No 81
>1qrj_B HTLV-I capsid protein; retrovirus, two-domain protein, alpha helical protein, heteronuclear spectroscopy; NMR {Human t-cell lymphotrophic virus TYPE1} SCOP: a.28.3.1 a.73.1.1
Probab=77.68 E-value=6.3 Score=31.30 Aligned_cols=64 Identities=13% Similarity=0.053 Sum_probs=47.8
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhcccC--CCCcHHHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAIH--KPSNLRDAIALAK 102 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~~--~p~tl~~~~~~A~ 102 (301)
+..++| .|+..+|++||-...+.-.. ..........+..-+++.+..++.. .-.+|++-+..+.
T Consensus 118 ~~~IkQGpkEPf~dfVdR~~k~l~ae~~~~~vK~~~~~tL~~qNANpdCk~ilk~l~~~~~tlee~~~aCq 188 (199)
T 1qrj_B 118 WASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGHTNSPLGDMLRACQ 188 (199)
T ss_dssp GGGCCBCTTSCHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHTTTBCHHHHHHHHHTTCSSSCHHHHHHHHT
T ss_pred cchhhcCCCCcHHHHHHHHHHHHHhhcCchhhhhHHHHHHHHHhcCchhHHHHHhcCCCCCCHHHHHHHhc
Confidence 456789 79999999999987776532 3445666677888899999888765 3568888766554
No 82
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=77.06 E-value=5.1 Score=34.40 Aligned_cols=88 Identities=18% Similarity=0.315 Sum_probs=51.9
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH---HH-----HHcC-ccee-------cccceEEEEecCceEeecceeeeEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR---LA-----HFLH-LAIE-------KTMSFLVAVGNGERIRSEGHCSKVK 251 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~---~~-----~~~~-~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~ 251 (301)
.+.+.|. .+++.+++||||+...|... |. ...+ .... ......+..++|... .+....=.
T Consensus 15 ~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~--~G~~~~D~ 92 (339)
T 3fv3_A 15 ASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTS--QGTWGKDT 92 (339)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTSCEE--EEEEEEEE
T ss_pred EEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCCceE--EEEEEEEE
Confidence 5556776 68999999999999888532 11 1111 1111 123456667777543 33333445
Q ss_pred EEEeceeEE-EeEEEecC-CCCcEEecHHH
Q 036248 252 FEMQGVGFE-ADFHILDF-SRADAVLGVQW 279 (301)
Q Consensus 252 ~~~~~~~~~-~~~~v~~~-~~~d~ILG~dw 279 (301)
+.+++.... ..|.+... ...|.|||+-+
T Consensus 93 v~~g~~~v~~~~fg~~~~~~~~~GilGLg~ 122 (339)
T 3fv3_A 93 VTINGVSITGQQIADVTQTSVDQGILGIGY 122 (339)
T ss_dssp EEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred EEECCEEECceEEEEEEecCCCceeEEecC
Confidence 677777654 34554443 45899999855
No 83
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=75.06 E-value=8.8 Score=32.76 Aligned_cols=88 Identities=17% Similarity=0.285 Sum_probs=49.2
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHHHHc--Ccce-ec---------ccceEEEEecCceEeecceeeeEEEEEe
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLAHFL--HLAI-EK---------TMSFLVAVGNGERIRSEGHCSKVKFEMQ 255 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~~~~--~~~~-~~---------~~~~~v~~~~g~~~~~~~~~~~~~~~~~ 255 (301)
.+.+.|. ++++.+++||||+...|...-+... +.+. .+ .....+..++|+... +....=.|.++
T Consensus 18 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~--G~~~~D~v~~g 95 (325)
T 2apr_A 18 YGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQADGRTWSISYGDGSSAS--GILAKDNVNLG 95 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEE--EEEEEEEEEET
T ss_pred EEEEEECCCCeEEEEEEcCCCCCEEEccCCCchHhcCCCCCCcccCCCeeeCCCEEEEEECCCCCEE--EEEEEEEEEEC
Confidence 5556777 7999999999999988764322111 1111 11 124556666776432 22223345666
Q ss_pred ceeEE-EeEEEecC-------CCCcEEecHHH
Q 036248 256 GVGFE-ADFHILDF-------SRADAVLGVQW 279 (301)
Q Consensus 256 ~~~~~-~~~~v~~~-------~~~d~ILG~dw 279 (301)
+.... ..|.+... ...|.|||+-+
T Consensus 96 ~~~v~~~~fg~~~~~~~~f~~~~~~GilGLg~ 127 (325)
T 2apr_A 96 GLLIKGQTIELAKREAASFASGPNDGLLGLGF 127 (325)
T ss_dssp TEEEEEEEEEEEEEECHHHHTSSCSEEEECSC
T ss_pred CEEECcEEEEEEeccCcccccCCCceEEEeCC
Confidence 65543 23433321 13899999854
No 84
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=74.56 E-value=9.4 Score=34.74 Aligned_cols=27 Identities=19% Similarity=0.257 Sum_probs=24.0
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEE
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFT 298 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~ 298 (301)
-..|||..||+.+-. ..|+.+++|.|.
T Consensus 449 ~~~ILGd~fl~~~y~-vfD~~~~rIGfA 475 (478)
T 1qdm_A 449 PLWILGDVFMGPYHT-VFDYGKLRIGFA 475 (478)
T ss_dssp SEEEECHHHHTTEEE-EEETTTTEEEEE
T ss_pred CcEEECHHHhccEEE-EEECCCCEEEEE
Confidence 458999999999994 899999999885
No 85
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=74.49 E-value=3.2 Score=28.76 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=20.8
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCH
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHP 215 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~ 215 (301)
.+.+.|. .+++.++|||||+...|..
T Consensus 16 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 43 (97)
T 1lya_A 16 YGEIGIGTPPQCFTVVFDTGSSNLWVPS 43 (97)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEeE
Confidence 4556676 6899999999999988754
No 86
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=74.13 E-value=11 Score=32.44 Aligned_cols=88 Identities=20% Similarity=0.322 Sum_probs=50.1
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH---H-----------HHHcC-cceec-------ccceEEEEecCceEeecc
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR---L-----------AHFLH-LAIEK-------TMSFLVAVGNGERIRSEG 245 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~---~-----------~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~ 245 (301)
.+.+.|. .+++.+++||||+...|... | +...+ ..... .....+..++|.... +
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~--G 92 (342)
T 2qzx_A 15 TADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRFDIKYGDGSYAK--G 92 (342)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEEEEECTTSCEEE--E
T ss_pred EEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcEEEEeCCCCeEE--E
Confidence 5556776 79999999999999988432 2 11111 11111 124566667776432 2
Q ss_pred eeeeEEEEEeceeEE-EeEEEec-CCCCcEEecHHH
Q 036248 246 HCSKVKFEMQGVGFE-ADFHILD-FSRADAVLGVQW 279 (301)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~v~~-~~~~d~ILG~dw 279 (301)
....=.|.+++.... ..|.+.. ....|.|||+-+
T Consensus 93 ~~~~D~v~~g~~~v~~~~fg~~~~~~~~~GilGLg~ 128 (342)
T 2qzx_A 93 KLYKDTVGIGGVSVRDQLFANVWSTSARKGILGIGF 128 (342)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEECSSSCEEECSC
T ss_pred EEEEEEEEECCEEecceEEEEEEecCCCcCEEEEcc
Confidence 223335566665543 3444443 246899999754
No 87
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=70.17 E-value=14 Score=31.63 Aligned_cols=88 Identities=16% Similarity=0.267 Sum_probs=50.0
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH---H-----------HHHcC-cceec-------ccceEEEEecCceEeecc
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR---L-----------AHFLH-LAIEK-------TMSFLVAVGNGERIRSEG 245 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~---~-----------~~~~~-~~~~~-------~~~~~v~~~~g~~~~~~~ 245 (301)
.+.+.|. .+++.+++||||+...|... + +...+ ..... .....+..++|.... +
T Consensus 15 ~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~--G 92 (334)
T 1j71_A 15 AADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQ--G 92 (334)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEEEEBTTSCEEE--E
T ss_pred EEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceEEEECCCCEEE--E
Confidence 5556776 78999999999999988432 2 11111 11111 123556667776432 2
Q ss_pred eeeeEEEEEeceeEE-EeEEEec-CCCCcEEecHHH
Q 036248 246 HCSKVKFEMQGVGFE-ADFHILD-FSRADAVLGVQW 279 (301)
Q Consensus 246 ~~~~~~~~~~~~~~~-~~~~v~~-~~~~d~ILG~dw 279 (301)
....=.+.+++.... ..|.+.. ....|.|||+-+
T Consensus 93 ~~~~D~v~~g~~~~~~~~fg~~~~~~~~~GilGLg~ 128 (334)
T 1j71_A 93 SFYKDTVGFGGISIKNQQFADVTTTSVDQGIMGIGF 128 (334)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEESSSSCEEECSC
T ss_pred EEEEEEEEECCEEEccEEEEEEEecCCCccEEEEcC
Confidence 223334566665543 3444443 246899999754
No 88
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=69.39 E-value=27 Score=30.68 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=20.8
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCH
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHP 215 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~ 215 (301)
.+.+.|. .+++.++|||||+...|..
T Consensus 24 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~ 51 (403)
T 3aup_A 24 WANLQKRTPLMQVPVLVDLNGNHLWVNC 51 (403)
T ss_dssp EEEEEETTTTEEEEEEEETTCSSEEEEC
T ss_pred EEEEECCCCCceeEEEEECCCCceeECC
Confidence 5556676 6899999999999988754
No 89
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=69.31 E-value=19 Score=31.42 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=21.5
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR 216 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~ 216 (301)
.+.+.|. .+++.++|||||+...|...
T Consensus 16 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~ 44 (383)
T 2ewy_A 16 YLEMLIGTPPQKLQILVDTGSSNFAVAGT 44 (383)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECS
T ss_pred EEEEEecCCCceEEEEEecCCCceEEecC
Confidence 5556676 68999999999999988543
No 90
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=69.15 E-value=23 Score=32.08 Aligned_cols=87 Identities=16% Similarity=0.248 Sum_probs=48.4
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHH------HHcC-ccee-------cccceEEEEecCceEeecceeeeEEEE
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLA------HFLH-LAIE-------KTMSFLVAVGNGERIRSEGHCSKVKFE 253 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~------~~~~-~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~~ 253 (301)
.+.+.|. .+++.+++||||+...|...-+ ...+ .... ...+..+..++|. . .+....=.|.
T Consensus 55 ~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs-~--~G~~~~Dtv~ 131 (478)
T 1qdm_A 55 FGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGS-I--AGYFSEDSVT 131 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEE-E--EEEEEEEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCC-e--EEEEEEEEEE
Confidence 4445666 6899999999999988853221 1111 1111 1124566666665 2 3333344566
Q ss_pred EeceeEE-EeEEEecC--------CCCcEEecHHH
Q 036248 254 MQGVGFE-ADFHILDF--------SRADAVLGVQW 279 (301)
Q Consensus 254 ~~~~~~~-~~~~v~~~--------~~~d~ILG~dw 279 (301)
+++.... ..|.+... ..+|.|||+-|
T Consensus 132 ig~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~ 166 (478)
T 1qdm_A 132 VGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGF 166 (478)
T ss_dssp ETTEEEEEEEEEEEEECCBSHHHHCSSSEEEECSC
T ss_pred ECCeEECCEEEEEEEecCCcccccccccceecccc
Confidence 6766543 23433321 24699999854
No 91
>1eia_A EIAV capsid protein P26; viral capsid, HIV, lentivirus, viral protein; 2.70A {Equine infectious anemia virus} SCOP: a.28.3.1 a.73.1.1 PDB: 2eia_A
Probab=68.45 E-value=8.9 Score=30.61 Aligned_cols=63 Identities=6% Similarity=-0.000 Sum_probs=45.2
Q ss_pred HhcCcc--cccHHHHHHHHHHHHHHhhcC---CHHHHHHHHHhcCCHHHHHhcccCC-CCcHHHHHHHH
Q 036248 39 LFKLTQ--TSSVEAYQSTFENICNRVTNL---HPDAILDCFISGLKPTIQNELAIHK-PSNLRDAIALA 101 (301)
Q Consensus 39 l~~lkQ--~~sv~~Y~~~f~~L~~~~~~~---~e~~~~~~f~~GL~~~i~~~l~~~~-p~tl~~~~~~A 101 (301)
+..+|| .|+..+|+.||-........- .........+...+++.+..++... -.+|++-+..+
T Consensus 135 ~~~IkQGpKEPf~dfVdR~~k~l~~e~~~~~vK~~mt~tL~~qNANpdCk~ilk~lg~~~tLee~~~aC 203 (207)
T 1eia_A 135 AQNIRQGAKEPYPEFVDRLLSQIKSEGHPQEISKFLTDTLTIQNANEECRNAMRHLRPEDTLEEKMYAC 203 (207)
T ss_dssp GGGCCCCTTCCHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHTSCHHHHHHTTTCCTTSCHHHHHHHT
T ss_pred ccccccCCCCcHHHHHHHHHHHHHhhccchhhhHHhhhhHHHHhcCHHHHHHHHhhCCCCCHHHHHHHh
Confidence 457789 799999999999987655321 2234555567888999999988654 45787766544
No 92
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=66.21 E-value=18 Score=32.42 Aligned_cols=87 Identities=17% Similarity=0.250 Sum_probs=46.7
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHH-HHcC-cce------e-cccceEEEEecCceEeecceeeeEEEEEec--
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLA-HFLH-LAI------E-KTMSFLVAVGNGERIRSEGHCSKVKFEMQG-- 256 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~-~~~~-~~~------~-~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~-- 256 (301)
.+.+.|. .+++.++|||||+...|....+ ...+ ... . ....+.+..++|.. .+....=.|.+++
T Consensus 77 ~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~cc~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~---~G~~~~Dtv~ig~~~ 153 (455)
T 3lpj_A 77 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW---EGELGTDLVSIPHGP 153 (455)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE---EEEEEEEEEECTTSC
T ss_pred EEEEEECCCCeEEEEEEcCCCcceEEecccccccCCcccCCCCCCcccCCccEEEEeCCeEE---EEEEEEEEEEECCCc
Confidence 4556776 6899999999999988854321 1111 111 0 12345666677763 2333333455542
Q ss_pred -eeEEEeEEEec--------CCCCcEEecHHH
Q 036248 257 -VGFEADFHILD--------FSRADAVLGVQW 279 (301)
Q Consensus 257 -~~~~~~~~v~~--------~~~~d~ILG~dw 279 (301)
......|.+.. ...+|.|||+-+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~ 185 (455)
T 3lpj_A 154 NVTVRANIAAITESDKFFINGSNWEGILGLAY 185 (455)
T ss_dssp SCEEEEEEEEEEEEESCSCTTCCCCEEEECSC
T ss_pred ceeeEEEEEEEEccCcccccCCCcceEEEeCc
Confidence 22222232221 135799999865
No 93
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=62.13 E-value=17 Score=32.01 Aligned_cols=87 Identities=16% Similarity=0.235 Sum_probs=46.6
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHHHH-HHcC-ccee-------cccceEEEEecCceEeecceeeeEEEEEec-e
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPRLA-HFLH-LAIE-------KTMSFLVAVGNGERIRSEGHCSKVKFEMQG-V 257 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~~~-~~~~-~~~~-------~~~~~~v~~~~g~~~~~~~~~~~~~~~~~~-~ 257 (301)
.+.+.|. .+++.++|||||+...|...-+ ...+ .... ......+..++|.. .+....=.|.+++ .
T Consensus 31 ~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~---~G~~~~D~v~ig~~~ 107 (402)
T 3vf3_A 31 YVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFLHRYYQRQLSSTYRDLRKGVYVPYTQGKW---EGELGTDLVSIPHGP 107 (402)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECSCCTTCSCCCCGGGCTTCEEEEEEEEEECSSCEE---EEEEEEEEEECTTSC
T ss_pred EEEEEECCCCeEEEEEEeCCCCceEEccCCCCcccCCcCcccCcccccCCCEEEEEECcEEE---EEEEEEEEEEECCcc
Confidence 5556676 6999999999999988854311 1111 1110 12345666677763 3333333455542 2
Q ss_pred --eEEEeEEEec--------CCCCcEEecHHH
Q 036248 258 --GFEADFHILD--------FSRADAVLGVQW 279 (301)
Q Consensus 258 --~~~~~~~v~~--------~~~~d~ILG~dw 279 (301)
.....|.+.. ...+|.|||+-+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~ 139 (402)
T 3vf3_A 108 NVTVRANIAAITESDKFFINGSNWEGILGLAY 139 (402)
T ss_dssp SCEEEEEEEEEEEEESCSCTTCCCCEEEECSC
T ss_pred ccceeeeEEEEEccccccccCCCccceEEcCc
Confidence 2222222211 135799999864
No 94
>3h47_A Ca, capsid protein P24; hexamer, engineered disulfide bonds, viral protein; 1.90A {Human immunodeficiency virus type 1} PDB: 3h4e_A 2lf4_A 3mge_A 3p05_A 3p0a_A 3dik_A 3nte_A 1e6j_P
Probab=59.10 E-value=15 Score=29.82 Aligned_cols=66 Identities=11% Similarity=0.187 Sum_probs=43.3
Q ss_pred HHhcCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhccc-CCCCcHHHHHHHHHH
Q 036248 38 TLFKLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAI-HKPSNLRDAIALAKL 103 (301)
Q Consensus 38 ~l~~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~-~~p~tl~~~~~~A~~ 103 (301)
.+..++| +|+..+|+.+|......... ..........++.-+++.|..++. ..-.+|++-+..+..
T Consensus 149 s~~~IkQGpkEPf~DfV~Rl~kal~~e~~~~~vK~~m~~tL~~qNANp~Ck~ilk~l~~~a~Lee~i~aCq~ 220 (231)
T 3h47_A 149 SILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQG 220 (231)
T ss_dssp CGGGCCCCTTCCHHHHHHHHHHHHHHC------------CHHHHTSCHHHHHHHHHHCTTCCHHHHHHHTC-
T ss_pred chhhhccCCCCcHHHHHHHHHHHHHhhcccchhhhHhHHhHHhhccCHHHHHHHhccCCCCCHHHHHHHccc
Confidence 4556888 89999999999998765432 222344455677779999888774 456788887776543
No 95
>3gv2_A Ca, fusion protein consisting of capsid protein P24, carbon dioxide-concentrating mechanism...; hexameric retroviral capsid; 7.00A {Human immunodeficiency virus type 1}
Probab=54.76 E-value=19 Score=30.99 Aligned_cols=66 Identities=11% Similarity=0.167 Sum_probs=46.3
Q ss_pred HHhcCcc--cccHHHHHHHHHHHHHHhhcC---CHHHHHHHHHhcCCHHHHHhccc-CCCCcHHHHHHHHHH
Q 036248 38 TLFKLTQ--TSSVEAYQSTFENICNRVTNL---HPDAILDCFISGLKPTIQNELAI-HKPSNLRDAIALAKL 103 (301)
Q Consensus 38 ~l~~lkQ--~~sv~~Y~~~f~~L~~~~~~~---~e~~~~~~f~~GL~~~i~~~l~~-~~p~tl~~~~~~A~~ 103 (301)
.+..++| +|+..+|+.||....+....- .+.......++.-+++.|..++. ..-.+|++.+..+..
T Consensus 149 s~~~IkQGPkEPf~DfVdRl~kal~~e~~~~~vK~~mt~tL~~qNANp~Ck~ilk~lg~~a~Lee~~~aCq~ 220 (342)
T 3gv2_A 149 SILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKALGPGATLEEMMTACQG 220 (342)
T ss_dssp CGGGCCCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHTHHHHTSCHHHHHHHHHHCTTCCHHHHHHHTC-
T ss_pred chhhhccCCCCcHHHHHHHHHHHHHhhccccchhhhhhhhhhhhccCHHHHHHHhccCCCCCHHHHHHHccc
Confidence 3456788 899999999999988765321 22345555667779999988874 456778887766544
No 96
>3tir_A ROUS sarcoma virus capsid protein P27; viral capsid protein, viral protein; 4.10A {Rous sarcoma virus} PDB: 2x8q_A
Probab=53.58 E-value=26 Score=28.27 Aligned_cols=65 Identities=15% Similarity=0.223 Sum_probs=46.7
Q ss_pred HHhcCcc--cccHHHHHHHHHHHHHHhhc---CCHHHHHHHHHhcCCHHHHHhcccC-CCCcH-HHHHHHHH
Q 036248 38 TLFKLTQ--TSSVEAYQSTFENICNRVTN---LHPDAILDCFISGLKPTIQNELAIH-KPSNL-RDAIALAK 102 (301)
Q Consensus 38 ~l~~lkQ--~~sv~~Y~~~f~~L~~~~~~---~~e~~~~~~f~~GL~~~i~~~l~~~-~p~tl-~~~~~~A~ 102 (301)
.|..++| +|+..+|+.||..-+.+... ..+.......++.=+++.|..++.- .-.++ +|++...+
T Consensus 152 ~~~~I~QGp~Epf~dfv~rl~~a~~~~~~~~~~~~~~~~~l~~qNAN~~ck~il~~~~~~~~~~~e~i~~~~ 223 (226)
T 3tir_A 152 PWADIMQGPSESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPSTLTTPGEIIKYVL 223 (226)
T ss_dssp CGGGCCCCTTCCHHHHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHSCHHHHHHHHTSCTTCCSHHHHHHHHH
T ss_pred chhHhhcCCCCcHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCCHHHHHHHHhCCCCCCChHHHHHHHh
Confidence 4678899 89999999999998877532 2344566677788899999887653 33333 77776543
No 97
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=47.40 E-value=30 Score=30.11 Aligned_cols=16 Identities=6% Similarity=0.212 Sum_probs=13.2
Q ss_pred CEeEEEEEcCCCCccccC
Q 036248 197 NKPLSVLIDTGSTHNYLH 214 (301)
Q Consensus 197 ~~~v~~liDsGAs~~~i~ 214 (301)
|.| ++|||||+...|.
T Consensus 23 GtP--v~~DTGSs~lWv~ 38 (381)
T 1t6e_X 23 GAS--LVLDVAGPLVWST 38 (381)
T ss_dssp TEE--EEEETTCCCEEEC
T ss_pred CCE--EEEECCCCceEEe
Confidence 455 8999999998875
No 98
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=46.55 E-value=12 Score=24.82 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.3
Q ss_pred CcEEecHHHHhhcCCeEeeccceEEEEEe
Q 036248 271 ADAVLGVQWLEKLGKIITDHKALTMEFTY 299 (301)
Q Consensus 271 ~d~ILG~dwL~~~~~i~id~~~~~~~~~~ 299 (301)
-..|||..||+.+-. ..|..+++|.|..
T Consensus 58 ~~~ILGd~Fl~~~y~-vfD~~~~riGfA~ 85 (87)
T 1b5f_B 58 PLWILGDVFMRPYHT-VFDYGNLLVGFAE 85 (87)
T ss_dssp BEEEECHHHHTTEEE-EEETTTTEEEEEE
T ss_pred CeEEechHHhccEEE-EEECCCCEEEEEE
Confidence 458999999999995 8999999998853
No 99
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=44.44 E-value=18 Score=29.31 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=22.8
Q ss_pred EEcCEe-------EEEEEcCCCCccccCHHHHHHc
Q 036248 194 KINNKP-------LSVLIDTGSTHNYLHPRLAHFL 221 (301)
Q Consensus 194 ~v~~~~-------v~~liDsGAs~~~i~~~~~~~~ 221 (301)
.|+|+. ..++||||.+..++..+.+..+
T Consensus 198 ~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i 232 (239)
T 1b5f_A 198 LIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQI 232 (239)
T ss_dssp EETTEECCTTTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred EECCEEecccCCCCEEEEecCcchhhCCHHHHHHH
Confidence 566654 4699999999999999988765
No 100
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=33.13 E-value=33 Score=29.98 Aligned_cols=27 Identities=22% Similarity=0.402 Sum_probs=21.7
Q ss_pred EEEEEEc--CEeEEEEEcCCCCccccCHH
Q 036248 190 QLSAKIN--NKPLSVLIDTGSTHNYLHPR 216 (301)
Q Consensus 190 ~i~~~v~--~~~v~~liDsGAs~~~i~~~ 216 (301)
.+.+.|. .+++.++|||||+...|...
T Consensus 24 ~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~ 52 (395)
T 2qp8_A 24 YVEMTVGSPPQTLNILVDTGSSNFAVGAA 52 (395)
T ss_dssp EEEEEETTTTEEEEEEEETTCCCEEEECS
T ss_pred EEEEEecCCCceEEEEEecCCCceEEECC
Confidence 4556676 79999999999999988644
Done!