BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036249
MPNVNNMKFLMNVVKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASAPTP
PNTTPAHV

High Scoring Gene Products

Symbol, full name Information P value
NRT2.4
nitrate transporter 2.4
protein from Arabidopsis thaliana 2.3e-12
NRT2:1
AT1G08090
protein from Arabidopsis thaliana 5.0e-12
NRT2.3
AT5G60780
protein from Arabidopsis thaliana 5.1e-12
NRT2.6
high affinity nitrate transporter 2.6
protein from Arabidopsis thaliana 8.0e-11
NRT2.5
nitrate transporter2.5
protein from Arabidopsis thaliana 3.5e-08

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036249
        (68 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2159280 - symbol:NRT2.4 "nitrate transporter 2...   174  2.3e-12   1
TAIR|locus:2205190 - symbol:NRT2:1 "AT1G08090" species:37...   171  5.0e-12   1
TAIR|locus:2159290 - symbol:NRT2.3 "AT5G60780" species:37...   171  5.1e-12   1
TAIR|locus:2075909 - symbol:NRT2.6 "high affinity nitrate...   160  8.0e-11   1
TAIR|locus:2010391 - symbol:NRT2.5 "nitrate transporter2....   135  3.5e-08   1


>TAIR|locus:2159280 [details] [associations]
            symbol:NRT2.4 "nitrate transporter 2.4" species:3702
            "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0015112 "nitrate transmembrane transporter
            activity" evidence=IGI;ISS] [GO:0071249 "cellular response to
            nitrate" evidence=IGI] [GO:0015706 "nitrate transport"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015472
            InterPro:IPR016196 SUPFAM:SSF103473 GO:GO:0071249
            InterPro:IPR020846 PROSITE:PS50850 GO:GO:0015112 GO:GO:0042128
            eggNOG:COG2223 HOGENOM:HOG000196276 ProtClustDB:PLN00028
            EMBL:DQ056732 IPI:IPI00532266 RefSeq:NP_200885.1 UniGene:At.55647
            ProteinModelPortal:Q9FJH8 SMR:Q9FJH8 STRING:Q9FJH8 PRIDE:Q9FJH8
            EnsemblPlants:AT5G60770.1 GeneID:836198 KEGG:ath:AT5G60770
            TAIR:At5g60770 InParanoid:Q9FJH8 OMA:GLEVTSM PhylomeDB:Q9FJH8
            Genevestigator:Q9FJH8 Uniprot:Q9FJH8
        Length = 527

 Score = 174 (66.3 bits), Expect = 2.3e-12, P = 2.3e-12
 Identities = 31/41 (75%), Positives = 36/41 (87%)

Query:    14 VKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRI 54
             VKSTEEYYY  EW E EK+KG+H+GSL+FA NSRSERGRR+
Sbjct:   476 VKSTEEYYYMKEWTETEKRKGMHEGSLKFAVNSRSERGRRV 516


>TAIR|locus:2205190 [details] [associations]
            symbol:NRT2:1 "AT1G08090" species:3702 "Arabidopsis
            thaliana" [GO:0015112 "nitrate transmembrane transporter activity"
            evidence=ISS;TAS] [GO:0055085 "transmembrane transport"
            evidence=IEA] [GO:0015706 "nitrate transport" evidence=RCA;IMP]
            [GO:0016020 "membrane" evidence=ISS] [GO:0048527 "lateral root
            development" evidence=IMP] [GO:0010167 "response to nitrate"
            evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0016020 GO:GO:0048527
            InterPro:IPR016196 SUPFAM:SSF103473 PROSITE:PS50850 GO:GO:0015112
            GO:GO:0042128 GO:GO:0010167 EMBL:AC026875 eggNOG:COG2223
            HOGENOM:HOG000196276 EMBL:Z97058 EMBL:AF019748 EMBL:AF093754
            IPI:IPI00522021 PIR:T51836 RefSeq:NP_172288.1 UniGene:At.5407
            ProteinModelPortal:O82811 SMR:O82811 IntAct:O82811 STRING:O82811
            TCDB:2.A.1.8.12 PRIDE:O82811 ProMEX:O82811
            EnsemblPlants:AT1G08090.1 GeneID:837327 KEGG:ath:AT1G08090
            TAIR:At1g08090 InParanoid:O82811 OMA:MRFPLGI PhylomeDB:O82811
            ProtClustDB:PLN00028 Genevestigator:O82811 Uniprot:O82811
        Length = 530

 Score = 171 (65.3 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query:    14 VKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRI 54
             VK TE +YY SEWNE+EKQK +HQGSLRFAEN++SE GRR+
Sbjct:   476 VKGTEAHYYGSEWNEQEKQKNMHQGSLRFAENAKSEGGRRV 516


>TAIR|locus:2159290 [details] [associations]
            symbol:NRT2.3 "AT5G60780" species:3702 "Arabidopsis
            thaliana" [GO:0015112 "nitrate transmembrane transporter activity"
            evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0055085 "transmembrane transport" evidence=IEA] [GO:0015706
            "nitrate transport" evidence=RCA] InterPro:IPR011701 Pfam:PF07690
            GO:GO:0016021 EMBL:CP002688 GO:GO:0055085 EMBL:AB015472
            InterPro:IPR016196 SUPFAM:SSF103473 PROSITE:PS50850 GO:GO:0042128
            eggNOG:COG2223 OMA:LSWFAFF ProtClustDB:PLN00028 EMBL:DQ447097
            IPI:IPI00534298 RefSeq:NP_200886.1 UniGene:At.55648
            ProteinModelPortal:Q9FJH7 SMR:Q9FJH7 IntAct:Q9FJH7 STRING:Q9FJH7
            EnsemblPlants:AT5G60780.1 GeneID:836199 KEGG:ath:AT5G60780
            TAIR:At5g60780 InParanoid:Q9FJH7 PhylomeDB:Q9FJH7
            ArrayExpress:Q9FJH7 Genevestigator:Q9FJH7 Uniprot:Q9FJH7
        Length = 539

 Score = 171 (65.3 bits), Expect = 5.1e-12, P = 5.1e-12
 Identities = 29/40 (72%), Positives = 36/40 (90%)

Query:    15 KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRI 54
             +S EEYYY SEW E EKQ+GLH+GS++FAENSRSERGR++
Sbjct:   484 RSQEEYYYGSEWTENEKQQGLHEGSIKFAENSRSERGRKV 523


>TAIR|locus:2075909 [details] [associations]
            symbol:NRT2.6 "high affinity nitrate transporter 2.6"
            species:3702 "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0015112 "nitrate transmembrane transporter
            activity" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0080167 "response to
            karrikin" evidence=IEP] [GO:0015706 "nitrate transport"
            evidence=RCA] InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021
            GO:GO:0005886 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0055085 GO:GO:0080167 InterPro:IPR016196 SUPFAM:SSF103473
            InterPro:IPR020846 PROSITE:PS50850 GO:GO:0042128 eggNOG:COG2223
            HOGENOM:HOG000196276 EMBL:AL353992 ProtClustDB:PLN00028
            EMBL:BT011687 EMBL:BT015382 IPI:IPI00530134 PIR:T48982
            RefSeq:NP_190092.1 UniGene:At.48735 ProteinModelPortal:Q9LXH0
            SMR:Q9LXH0 EnsemblPlants:AT3G45060.1 GeneID:823641
            KEGG:ath:AT3G45060 TAIR:At3g45060 InParanoid:Q9LXH0 OMA:MPYIKAD
            PhylomeDB:Q9LXH0 Genevestigator:Q9LXH0 Uniprot:Q9LXH0
        Length = 542

 Score = 160 (61.4 bits), Expect = 8.0e-11, P = 8.0e-11
 Identities = 28/39 (71%), Positives = 34/39 (87%)

Query:    15 KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRR 53
             KS EE+YY +EW EEEK  GLH+GS++FAENSRSERGR+
Sbjct:   487 KSKEEHYYGAEWTEEEKSLGLHEGSIKFAENSRSERGRK 525


>TAIR|locus:2010391 [details] [associations]
            symbol:NRT2.5 "nitrate transporter2.5" species:3702
            "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0015112 "nitrate transmembrane transporter
            activity" evidence=ISS] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            InterPro:IPR011701 Pfam:PF07690 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0055085
            InterPro:IPR016196 SUPFAM:SSF103473 EMBL:AC012187 PROSITE:PS50850
            GO:GO:0042128 eggNOG:COG2223 HOGENOM:HOG000196276
            ProtClustDB:PLN00028 IPI:IPI00529346 PIR:C86263 RefSeq:NP_172754.1
            UniGene:At.42054 ProteinModelPortal:Q9LPV5 SMR:Q9LPV5 STRING:Q9LPV5
            EnsemblPlants:AT1G12940.1 GeneID:837852 KEGG:ath:AT1G12940
            TAIR:At1g12940 InParanoid:Q9LPV5 OMA:IFFKGSK PhylomeDB:Q9LPV5
            Genevestigator:Q9LPV5 Uniprot:Q9LPV5
        Length = 502

 Score = 135 (52.6 bits), Expect = 3.5e-08, P = 3.5e-08
 Identities = 26/38 (68%), Positives = 30/38 (78%)

Query:    15 KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGR 52
             K TEE YY +EWN+EEK+K LH GS +FAE S SERGR
Sbjct:   457 KVTEEDYYLAEWNDEEKEKNLHIGSQKFAETSISERGR 494


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.127   0.362    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       68        56   0.00091  102 3  11 23  0.36    28
                                                     29  0.42    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  469 (50 KB)
  Total size of DFA:  88 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.07u 0.18s 8.25t   Elapsed:  00:00:00
  Total cpu time:  8.08u 0.18s 8.26t   Elapsed:  00:00:00
  Start:  Sat May 11 06:47:29 2013   End:  Sat May 11 06:47:29 2013

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