BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036249
         (68 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9FJH8|NRT24_ARATH High affinity nitrate transporter 2.4 OS=Arabidopsis thaliana
           GN=NRT2.4 PE=2 SV=1
          Length = 527

 Score = 92.0 bits (227), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/55 (72%), Positives = 46/55 (83%), Gaps = 3/55 (5%)

Query: 14  VKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASAPTPPNTTPAHV 68
           VKSTEEYYY  EW E EK+KG+H+GSL+FA NSRSERGRR+ASAP+PP   P HV
Sbjct: 476 VKSTEEYYYMKEWTETEKRKGMHEGSLKFAVNSRSERGRRVASAPSPP---PEHV 527


>sp|Q9FJH7|NRT23_ARATH High affinity nitrate transporter 2.3 OS=Arabidopsis thaliana
           GN=NRT2.3 PE=1 SV=1
          Length = 539

 Score = 91.3 bits (225), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/56 (69%), Positives = 47/56 (83%), Gaps = 2/56 (3%)

Query: 15  KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASA--PTPPNTTPAHV 68
           +S EEYYY SEW E EKQ+GLH+GS++FAENSRSERGR++A A  PTP N TP+HV
Sbjct: 484 RSQEEYYYGSEWTENEKQQGLHEGSIKFAENSRSERGRKVALANIPTPENGTPSHV 539


>sp|O82811|NRT21_ARATH High-affinity nitrate transporter 2.1 OS=Arabidopsis thaliana
           GN=NRT2.1 PE=1 SV=1
          Length = 530

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 45/55 (81%)

Query: 14  VKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASAPTPPNTTPAHV 68
           VK TE +YY SEWNE+EKQK +HQGSLRFAEN++SE GRR+ SA TPP  TP +V
Sbjct: 476 VKGTEAHYYGSEWNEQEKQKNMHQGSLRFAENAKSEGGRRVRSAATPPENTPNNV 530


>sp|Q9LXH0|NRT26_ARATH High affinity nitrate transporter 2.6 OS=Arabidopsis thaliana
           GN=NRT2.6 PE=1 SV=1
          Length = 542

 Score = 83.2 bits (204), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/56 (64%), Positives = 44/56 (78%), Gaps = 2/56 (3%)

Query: 15  KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRR--IASAPTPPNTTPAHV 68
           KS EE+YY +EW EEEK  GLH+GS++FAENSRSERGR+  +A  PTP   +PAHV
Sbjct: 487 KSKEEHYYGAEWTEEEKSLGLHEGSIKFAENSRSERGRKAMLADIPTPETGSPAHV 542


>sp|Q9LPV5|NRT25_ARATH High affinity nitrate transporter 2.5 OS=Arabidopsis thaliana
           GN=NRT2.5 PE=2 SV=1
          Length = 502

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/44 (61%), Positives = 32/44 (72%)

Query: 15  KSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASAP 58
           K TEE YY +EWN+EEK+K LH GS +FAE S SERGR   + P
Sbjct: 457 KVTEEDYYLAEWNDEEKEKNLHIGSQKFAETSISERGRATTTHP 500


>sp|Q9LMZ9|NRT22_ARATH High-affinity nitrate transporter 2.2 OS=Arabidopsis thaliana
           GN=NRT2.2 PE=2 SV=1
          Length = 522

 Score = 37.0 bits (84), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 25/36 (69%)

Query: 19  EYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRI 54
           E+YY  E+++EE+Q G+H  S  FA+ +++E G  +
Sbjct: 478 EHYYVGEYSKEEQQIGMHLKSKLFADGAKTEGGSSV 513


>sp|Q02749|YP068_YEAST Uncharacterized protein YPL068C OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=YPL068C PE=1 SV=1
          Length = 293

 Score = 28.9 bits (63), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 5   NNMKFLMNVVKSTEEYYYASEWNEEEKQKGLHQGSLRFAENSRSERGRRIASAPTPPNTT 64
           N++K L N+V      Y   + N + K + +    L+ +  + S++ +++ +   PP + 
Sbjct: 132 NDLKLLQNIV---NLLYSFEQLNSDSKTRPVTTSKLKASSQAHSDKLKKMLAERKPPFSH 188

Query: 65  PAH 67
           P+H
Sbjct: 189 PSH 191


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.309    0.124    0.358 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,517,084
Number of Sequences: 539616
Number of extensions: 826865
Number of successful extensions: 1906
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1898
Number of HSP's gapped (non-prelim): 10
length of query: 68
length of database: 191,569,459
effective HSP length: 40
effective length of query: 28
effective length of database: 169,984,819
effective search space: 4759574932
effective search space used: 4759574932
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)