BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036250
(347 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 162/323 (50%), Gaps = 32/323 (9%)
Query: 2 GDATVG----SYWCYICSRMVNPRME---AGIKCPFCETGFVEQMSSSITDDSINNGIHV 54
G TVG ++CY C+R VN + + CP C GF+E+ + + N G
Sbjct: 12 GANTVGVTNKPFFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNP----NPNQGSGF 67
Query: 55 GSDRALSL-WAPILLRMMTGLAPSRPRITAHEHISSNNSRIEEAEQEGEFESLLRRRRRN 113
+ S+ + + L + A P + ++ +S R R +
Sbjct: 68 LNPNPNSIPFHDLFLTLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGD 127
Query: 114 SSAPLSRMLQDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLGEYLV 173
A F I + ND + + +I NP + QG +++G+Y +
Sbjct: 128 PFA-----FDPFTF-IQNHLNDLRSSGAQIEFVIQNNPSD------QGFRLPANIGDYFI 175
Query: 174 GPGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQDL------QCAVCLEEFVMGN 227
GPGL+ L+Q L ENDPNRYG+ PA K ++ALP V I + QCAVC+++F G
Sbjct: 176 GPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGT 235
Query: 228 EAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNT 287
EAK+MPCKH +H +C++PWLEL +SCP+CR++LP+DD + G + S GN D N+
Sbjct: 236 EAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDDPDYERRVRGAQGTSGGN-DGDNS 294
Query: 288 LRLANGEVGNGRRNW-IPIPWPF 309
+ ++G+ R++ I +PWPF
Sbjct: 295 GQRSDGDNRTVERSFRISLPWPF 317
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 136/277 (49%), Gaps = 54/277 (19%)
Query: 9 YWCYICSRMVNPRMEAGIK--CPFCETGFVEQMSSSITDDSINNGIHVGSDRALSLWAPI 66
++CY C++ V + + CP C GF+E+ + S+N + SD + P
Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPN-SSDSFFPMADPF 79
Query: 67 --LLRMMTG---LAPSR--------PRITAHEHISSNNSRIEEAEQEGEFESLLRRRRRN 113
LL ++ G APS P + + N + + + ++ L+ R +
Sbjct: 80 STLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLRSS 139
Query: 114 SSAPLSRMLQDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLGEYLV 173
+ F I + P+DP G + G+Y
Sbjct: 140 GTH--------FEFVIENHPSDP------------------------GNRMPGNFGDYFF 167
Query: 174 GPGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQDL------QCAVCLEEFVMGN 227
GPGL+ L+Q L ENDPNRYG+ PA K + ALPTV + +D+ QCAVC++EF G+
Sbjct: 168 GPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGS 227
Query: 228 EAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDD 264
+ K+MPCKH FH +C++PWLEL +SCP+CR++LP+DD
Sbjct: 228 DVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 134/298 (44%), Gaps = 51/298 (17%)
Query: 9 YWCYICSRMVNPRMEAGIKCPFCETGFVEQMSSSITDDSINNGIHVGSDRALS-----LW 63
++C+ C VNP++ I CP C++GF+E+++ D S G +D + + LW
Sbjct: 20 FFCHFCKGEVNPKLPEYI-CPRCDSGFIEEVTD---DSSFLGGGGSRTDNSTATHFAELW 75
Query: 64 APILLRMMTGLAPSRPRITAHEHISSNNSRIEEAEQEGEF---------ESLLRRRRRNS 114
+ M L RP ++++ N + + +F R R R S
Sbjct: 76 DHLDHTMF--LQDFRPFLSSNPLDQDNRANERGHQTHTDFWGPSRPPRLPMTRRYRSRGS 133
Query: 115 SAP-----LSRMLQDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLG 169
+ P + ++Q I G + P + S S +L S+ G
Sbjct: 134 TRPDRSPAIEGIIQQIFAGFFANSAIPGSPHPFSWSGML----------------HSNPG 177
Query: 170 EYLVG-PGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEF 223
+Y G GLD ++ LL N G PA KE + +LPTV + Q+ L+C VC E++
Sbjct: 178 DYAWGQTGLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDY 236
Query: 224 VMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNREDSAGN 281
+ + +++PC H FH CI+PWLEL +CP+CR L +D Q S E SA N
Sbjct: 237 TVEEKVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQTQSS---EASASN 291
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 38/291 (13%)
Query: 9 YWCYICSRMVNPRMEAGIKCPFCETGFVEQMSSSITDDS---------INNGIHVGSDRA 59
++C+ C V+P++ I CP CE+GF+E+ +TDDS I+N +
Sbjct: 20 FFCHFCKGEVSPKLPEYI-CPRCESGFIEE----VTDDSSFLGGGGSRIDN---TTTTHF 71
Query: 60 LSLWAPILLRMMTGLAPSRPRITAHEHISSNNSRIEEAEQEGEFESLLRRRRRNSSAPLS 119
LW + M RP +++ N + + +F R PL
Sbjct: 72 AELWGHLDHTMF--FQDFRPFLSSSPLDQDNRANERGHQTHTDFWGA-----RPPRLPLG 124
Query: 120 RMLQDIRFGIASRPNDPEALRERSGSLILVN---PMNEEALIIQGENAASSLGEYLVG-P 175
R + R E + + + N P + G S+ G+Y G
Sbjct: 125 RRYRSRGSSRPDRSPAIEGILQHIFAGFFANSAIPGSPHPFSWSG-MLHSNPGDYAWGQT 183
Query: 176 GLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMGNEAK 230
GLD ++ LL N G PA KE + +LPTV + Q+ L+C VC E++ + E +
Sbjct: 184 GLDAIVTQLLGQLENT-GPPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVR 242
Query: 231 EMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNREDSAGN 281
++PC H FH CI+PWLEL +CP+CR L +D Q S + E SA N
Sbjct: 243 QLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQ---SQSTEASASN 290
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 125/286 (43%), Gaps = 51/286 (17%)
Query: 7 GSYWCYICSRMVNPRMEAGIKCPFCETGFVEQM-------------SSSITDDSINNGIH 53
G Y+C+ CS + PR+ I CP CE+GF+E++ S++ TD N
Sbjct: 9 GRYFCHCCSVEIVPRLPDYI-CPRCESGFIEELPEETRNTENGSAPSTAPTDQ--NRQPF 65
Query: 54 VGSDRALSLWAPILLRMMTGLAPSRPRI-TAHEHISSNNSRIEEAEQEGEFESLLRRRRR 112
D+ L + G+ I T +++ R E+ +E E +S R R
Sbjct: 66 ENVDQHLFTLPQGYSQFAFGIFDDSFEIPTFPPGAQADDGRDPESRREREHQS---RHRY 122
Query: 113 NSSAPLSRMLQDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLG--- 169
+ P +R+ A R A G L + + I A SLG
Sbjct: 123 GARQPRARL-------TARR-----ATGRHEGVPTLEGIIQQLVNGIISPAAVPSLGLGP 170
Query: 170 ---------EYLVGP-GLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----L 214
+Y G GLD ++ LL N G PA KE ++ALPTV + ++ L
Sbjct: 171 WGVLHSNPMDYAWGANGLDTIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGL 229
Query: 215 QCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
+C VC E++ +G +++PC H FH CI+PWLE SCP+CR L
Sbjct: 230 ECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 125/275 (45%), Gaps = 31/275 (11%)
Query: 7 GSYWCYICSRMVNPRMEAGIKCPFCETGFVEQM-------------SSSITDDSINNGIH 53
G Y+C+ CS + PR+ I CP CE+GF+E++ S++ TD S H
Sbjct: 9 GRYFCHCCSVEIVPRLPDYI-CPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPPLEH 67
Query: 54 VGSDRALSLWAPILLRMMTGLAPSRPRI-TAHEHISSNNSRIEEAEQEGEFESLLRRRRR 112
V D+ L + G+ I T +++ R E+ +E + S R R
Sbjct: 68 V--DQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPS---RHRY 122
Query: 113 NSSAPLSRMLQDIRFGIASRPNDPEALRERSGSLI--LVNPMNEEALIIQGENAASSLGE 170
+ P +R+ G R L L+ ++ P +L G ++ +
Sbjct: 123 GARQPRARLTTRRATG---RHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDY 179
Query: 171 YLVGPGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVM 225
GLD ++ LL N G PA KE ++ALPTV + ++ L+C VC +++ +
Sbjct: 180 AWGANGLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYAL 238
Query: 226 GNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
G +++PC H FH CI+PWLE SCP+CR L
Sbjct: 239 GERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 20/270 (7%)
Query: 6 VGSYWCYICSRMVNPRMEAGIKCPFCETGFVEQMSSSITDDSINNGIHVGSDRALSLWAP 65
G Y+C+ C+ + PR+ CP C++GF+E++ + + N+ + G+D+ +
Sbjct: 8 AGRYFCHSCTAEITPRLPE-YTCPRCDSGFIEELPETSRNSESNSSNNSGTDQNRPSFEN 66
Query: 66 ILLRMMTGLAPSRPRITA-------HEHISSNNSRIEEAEQEGEFESLLRRRRRNSSAPL 118
I T L ++T + + +EE R+R + P
Sbjct: 67 IESAQFT-LPSGYGQVTFGIFNEGLDFPMFGTSGPVEETRDGESRREHQSRQRYGARQPR 125
Query: 119 SRMLQDIRFGIASRPNDPE---ALRERSGSLILVNPMNEEALIIQGENAASSLGEYLVGP 175
+RM R G P +++ +I M+ + G ++ +
Sbjct: 126 ARM--STRRGAGRNEGVPTLEGIIQQLVNGIIAPTAMSNLGVGPWGVLHSNPMDYAWGAN 183
Query: 176 GLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMGNEAK 230
GLD ++ LL N G PA + ++ALPT+ I ++ L+C VC E++ +G +
Sbjct: 184 GLDTIITQLL-NQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESVR 242
Query: 231 EMPCKHKFHGECIMPWLELQSSCPICRYQL 260
++PC H FH +CI+PWLE +CP+CR L
Sbjct: 243 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 24/273 (8%)
Query: 7 GSYWCYICSRMVNPRMEAGIKCPFCETGFVEQMS------------SSITDDSINNGIHV 54
G Y+C+ CS + PR+ I CP CE+GF+E++ S+ + D
Sbjct: 9 GRYFCHCCSVEIVPRLPDYI-CPRCESGFIEELPEETRSAENGSAPSTASADQSRQQPFE 67
Query: 55 GSDRALSLWAPILLRMMTGLAPSRPRI-TAHEHISSNNSRIEEAEQEGEFESLLRRRRRN 113
D+ L G+ I T +++SR E+ +E E S R R
Sbjct: 68 NVDQPLFTLPQGYGHFAFGIFDDSFEIPTFPPGAQADDSRDPESRREREQHS---RHRYG 124
Query: 114 SSAPLSRMLQDIRFG-IASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLGEYL 172
+ P +R+ G P +++ +I + L G ++ +
Sbjct: 125 ARQPRARLTARRATGRHEGVPTLEGIIQQLVNGIITPATIPNLGLGPWGVLHSNPMDYAW 184
Query: 173 VGPGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMGN 227
GLD ++ LL N G PA KE ++ALPTV + ++ L+C VC +++ +G
Sbjct: 185 GANGLDAIITQLL-NQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGE 243
Query: 228 EAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
+++PC H FH CI+PWLE SCP+CR L
Sbjct: 244 HVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 85/142 (59%), Gaps = 22/142 (15%)
Query: 146 LILVNPMNEEALIIQGENA----------ASSLGEYLVGPGLDLLLQHLLEND-PNRYGS 194
L+ N M+ A I+ GE++ ++L + L+ GLD+++ +L++ P R +
Sbjct: 144 LVQQNLMSAFASIVGGESSNGPTENTIGETANLMQELIN-GLDMIIPDILDDGGPPR--A 200
Query: 195 LPAQKEVVKALPTVAIDQDL--------QCAVCLEEFVMGNEAKEMPCKHKFHGECIMPW 246
PA KEVV+ LP + ++L +C +C E V+G++ +E+PCKH FH C+ PW
Sbjct: 201 PPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPW 260
Query: 247 LELQSSCPICRYQLPSDDLKVQ 268
L+ +SCPICR++LP+DD K +
Sbjct: 261 LDEHNSCPICRHELPTDDQKYE 282
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 176 GLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMGNEAK 230
GLD ++ LL N G PA E ++ALPT+ I ++ L+C VC E++ +G +
Sbjct: 183 GLDTIITQLL-NQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVR 241
Query: 231 EMPCKHKFHGECIMPWLELQSSCPICRYQL 260
++PC H FH +CI+PWLE +CP+CR L
Sbjct: 242 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 6 VGSYWCYICSRMVNPRMEAGIKCPFCETGFVEQMSSS 42
G Y+C+ C+ + PR+ CP C++GF+E++ +
Sbjct: 8 AGRYFCHSCTAEIIPRLPE-YTCPRCDSGFIEELPET 43
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 6/90 (6%)
Query: 176 GLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMGNEAK 230
GLD ++ LL N G PA E ++ALPT+ I ++ L+C VC E++ +G +
Sbjct: 184 GLDTIITQLL-NQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVR 242
Query: 231 EMPCKHKFHGECIMPWLELQSSCPICRYQL 260
++PC H FH +CI+PWLE +CP+CR L
Sbjct: 243 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 6 VGSYWCYICSRMVNPRMEAGIKCPFCETGFVEQMSSS 42
G Y+C+ C+ + PR+ CP C++GF+E++ +
Sbjct: 8 AGRYFCHSCTAEITPRLPE-YTCPRCDSGFIEELPET 43
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 196 PAQKEVVKALPTVAIDQ---DLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSS 252
PA K VV++LP I DL+C VCL EF EMPC H FH CI+PWL +S
Sbjct: 65 PAAKAVVESLPRTVISSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSKTNS 124
Query: 253 CPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNTLRLANG 293
CP+CR++LP+DD + +++D A + + L +G
Sbjct: 125 CPLCRHELPTDD----DSYEEHKKDKARRQQQQHRLENLHG 161
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 162 ENAASSLGEYLVGPGLDLLLQHLLENDPNRYGSLPAQKEVVKALPTVAI-----DQDLQC 216
+NA L L+ G+D+ L L + ++ PA K+VV++LP V + D L+C
Sbjct: 21 QNALLELARSLLS-GMDIDLGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKC 79
Query: 217 AVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSD 263
VCL EF G +++PC+H FH CI+PWL +SCP+CR++LP+D
Sbjct: 80 PVCLLEFEEGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTD 126
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 196 PAQKEVVKALPTVAI-----DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQ 250
PA K VV++LP V I D+ ++C VCL EF +EMPCKH FH CI+PWL
Sbjct: 54 PAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLFHTGCILPWLNKT 113
Query: 251 SSCPICRYQLPSDD 264
+SCP+CR +LP+D+
Sbjct: 114 NSCPLCRLELPTDN 127
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 5/73 (6%)
Query: 196 PAQKEVVKALPTVAI-----DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQ 250
PA K+VV++LP V + D L+C VCL EF G +++PC+H FH CI+PWL
Sbjct: 54 PASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGETVRQLPCEHLFHSACILPWLGKT 113
Query: 251 SSCPICRYQLPSD 263
+SCP+CR++LP+D
Sbjct: 114 NSCPLCRHELPTD 126
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 196 PAQKEVVKALPTVAI---DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSS 252
PA K VV+ LP I +L+C VCL EF A EMPC H FH CI+PWL +S
Sbjct: 53 PAAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWLSKTNS 112
Query: 253 CPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNTLRLANG 293
CP+CRY+LP+DD +R D A + + L +G
Sbjct: 113 CPLCRYELPTDD----DTYEEHRRDKARKQQQQHRLENLHG 149
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 9/102 (8%)
Query: 176 GLDLLLQHLLENDPNRYGSL----PAQKEVVKALPTVAIDQD-----LQCAVCLEEFVMG 226
G + LLQ+L E D G PA K ++AL T + + CAVC + VMG
Sbjct: 208 GYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMG 267
Query: 227 NEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQ 268
K++PC H +HG+CI+PWL ++SCP+CR+QL +DD + +
Sbjct: 268 ETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYE 309
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 151 PMNEEALIIQGENAASSLGEYLVGP-GLDLLLQHLLENDPNRYGSLPAQKEVVKAL---- 205
P N + N + + G+Y G GLD ++ L+E PA ++V+ +
Sbjct: 325 PFNPANMFSNIFNLSGNPGDYAWGARGLDDIISQLMEQAQGHNAPAPAPEDVIAKMKVQK 384
Query: 206 -PTVAIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDD 264
P ID++ +C +C+E F + ++ ++PCKH FH CI PWL + +C ICR P D
Sbjct: 385 PPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR--APVDP 442
Query: 265 LKVQGNGSGNREDSAGNEDAGN 286
Q N + DSA + N
Sbjct: 443 NSQQRNNTST--DSANGHNPSN 462
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 196 PAQKEVVKALPTVAI---DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSS 252
PA K VV++LP I +L+C VCL EF EMPC H FH CI+PWL +S
Sbjct: 65 PAAKAVVESLPRTVIRSSKAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSKTNS 124
Query: 253 CPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNTLRLANG 293
CP+CR++LP+DD + +++D A + + L +G
Sbjct: 125 CPLCRHELPTDD----DSYEEHKKDKARRQQQQHRLENLHG 161
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 196 PAQKEVVKALPTVAI---DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSS 252
PA K V+ LP I +L+C VCL EF A EMPC H FH CI+PWL +S
Sbjct: 53 PAAKTAVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCHHLFHSNCILPWLSKTNS 112
Query: 253 CPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNTLRLANG 293
CP+CR++LP+DD ++ D A + + L +G
Sbjct: 113 CPLCRHELPTDD----DTYEEHKRDKARKQQQKHRLENLHG 149
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 197 AQKEVVKALPTVAIDQ-----DLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQS 251
A K + LP I + DL+C+VC E G + + +PCKH+FH ECI+ WL+ +
Sbjct: 46 ASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTN 105
Query: 252 SCPICRYQLPSDDLKVQGNGSGNREDSAGNEDAGNTL 288
SCP+CRY+L +DD V R+D A + NTL
Sbjct: 106 SCPLCRYELETDD-PVYEELRRFRQDEANRRERENTL 141
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 11/140 (7%)
Query: 123 QDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLGEYLVGPGLDLLLQ 182
QD+ SR + + L++ +++LV + L++Q + AS + +G +DL +
Sbjct: 235 QDLVCLGGSRAQEQKPLQQLWNAILLVAMLLCTGLVVQAQRQASRQSQRELGGQVDLFKR 294
Query: 183 HLLENDPNRYGSLPAQK----EVVKALPTVAIDQDLQCAVCLEEFVMGNEAKEMPCKHKF 238
++ R SL ++ + LP + CAVCL+ F + +PCKH+F
Sbjct: 295 RVV----RRLASLKTRRCRLSRAAQGLPDPGAET---CAVCLDYFCNKQWLRVLPCKHEF 347
Query: 239 HGECIMPWLELQSSCPICRY 258
H +C+ PWL LQ +CP+C++
Sbjct: 348 HRDCVDPWLMLQQTCPLCKF 367
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + ALP + A+ Q++ C +C E+V G A E+PC H FH C+ WL+
Sbjct: 503 PASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 562
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 563 KSGTCPVCRCMFP 575
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + ALP + A+ Q++ C +C E+V G A E+PC H FH C+ WL+
Sbjct: 568 PASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 627
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 628 KSGTCPVCRCMFP 640
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 196 PAQKEVVKAL----PTV---AIDQDL-QCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWL 247
PAQ E V+AL P A+ D +C +CLEEF +G+E + +PC H FH ECI WL
Sbjct: 207 PAQTEAVEALIQELPKFRLKAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWL 266
Query: 248 ELQSSCPICRYQ-LPSDDLKVQGN--GSGNREDSAGNEDA 284
L CP CR P DL N SG + S N +
Sbjct: 267 RLNVKCPRCRCSVFPDLDLSALSNLQSSGTEQHSQVNTET 306
>sp|A8WWR3|HRDL1_CAEBR E3 ubiquitin-protein ligase hrd-like protein 1 OS=Caenorhabditis
briggsae GN=hrdl-1 PE=3 SV=1
Length = 578
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 171 YLVGPGLDLLLQHLLENDPNRYGSLPAQ-----------KEVVKALPTV-AIDQDLQCAV 218
++ PGL+L L + Y + Q + + A P+V A + D +C V
Sbjct: 293 FVFAPGLNLTSIFFLYHMKLTYNCMREQLGRHRTHKKIFEHIESAYPSVKAANSDDRCIV 352
Query: 219 CLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNREDS 278
C E ++G ++ +PC H+FH C+M WL SSCP CRY +PS + SGN
Sbjct: 353 CWE--LLGT-SRRLPCSHQFHDWCLMWWLAQDSSCPTCRYVIPSPQEEASRTDSGN---- 405
Query: 279 AGNEDAGNTLRLANG 293
GNT+ NG
Sbjct: 406 ------GNTMFRFNG 414
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 123 QDIRFGIASRPNDPEALRERSGSLILVNPMNEEALIIQGENAASSLGEYLVGPGLDLLLQ 182
QD+ ++ + + L++ +++LV + L++Q + AS + G DL +
Sbjct: 237 QDLVCLGGAQAQEQKPLQQLWNAILLVAMLLCTGLVVQAQRQASRQNQQEPGGQEDLFKR 296
Query: 183 HLLENDPNRYGSLPAQK----EVVKALPTVAIDQDLQCAVCLEEFVMGNEAKEMPCKHKF 238
++ R SL ++ +LP + CAVCL+ F + +PCKH+F
Sbjct: 297 RVV----RRLASLKTRRCRLSRAAHSLPEPGTET---CAVCLDYFCNKQWLRVLPCKHEF 349
Query: 239 HGECIMPWLELQSSCPICRY 258
H +C+ PWL LQ +CP+C++
Sbjct: 350 HRDCVDPWLMLQQTCPLCKF 369
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNR 275
CA+CLE+++ G E + +PC H+FH C+ PWL +CP CR+ + + K G+G G
Sbjct: 202 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI--IEQKKGGHGPGCV 259
Query: 276 EDSAGNEDAGNTLRLANGEVGNGRRNWIPIPWP 308
E+S L++G +R +P+ +P
Sbjct: 260 ENS-----------LSHGRQQQQQRVILPVHYP 281
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + LP AI Q+ C +C E++ + A E+PC H FH C+ WL+
Sbjct: 606 PASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 665
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 666 KSGTCPVCRRHFP 678
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + LP AI Q+ C +C E++ + A E+PC H FH C+ WL+
Sbjct: 607 PASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 667 KSGTCPVCRRHFP 679
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + LP AI Q+ C +C E++ + A E+PC H FH C+ WL+
Sbjct: 606 PASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 665
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 666 KSGTCPVCRRHFP 678
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 196 PAQKEVVKALPTV-------AIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLE 248
PA KE + LP AI Q+ C +C E++ + A E+PC H FH C+ WL+
Sbjct: 607 PASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCVSIWLQ 666
Query: 249 LQSSCPICRYQLP 261
+CP+CR P
Sbjct: 667 KSGTCPVCRRHFP 679
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 202 VKALPTVAIDQD-----LQCAVCLEEFVMGNEAKEMP-CKHKFHGECIMPWLELQSSCPI 255
+ +LP V QD L+C++CL E V G++A+ +P C H FH ECI W + S+CPI
Sbjct: 108 LSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPI 167
Query: 256 CR 257
CR
Sbjct: 168 CR 169
>sp|Q9M2S6|SDIR1_ARATH E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana GN=SDIR1
PE=1 SV=1
Length = 273
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 211 DQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQ 259
+ +L C+VCLE+ +G + +PC H+FH CI PWL Q +CP+C+++
Sbjct: 206 EDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQGTCPVCKFR 254
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 199 KEVVKALPTVAI------DQDLQCAVCLEEFVMGNEAKEMP-CKHKFHGECIMPWLELQS 251
+ V+++LP L+CAVCL F + +P CKH FH EC+ WL+ S
Sbjct: 123 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 182
Query: 252 SCPICRYQLPSDDLKVQGN 270
+CP+CRY++ +D+ + G+
Sbjct: 183 TCPLCRYRVDPEDILLIGD 201
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNR 275
C+VC+ E+ GN+ +++PC H++H CI WL S+CPICR + S SGNR
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLS---------SGNR 596
Query: 276 E 276
E
Sbjct: 597 E 597
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 199 KEVVKALPTVAIDQD-------LQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQS 251
KE + L T + +QD C+VC+ ++V GN+ +++PC H+FH CI WL
Sbjct: 590 KEQIDNLSTRSYEQDGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENC 649
Query: 252 SCPICR 257
+CP+CR
Sbjct: 650 TCPVCR 655
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 199 KEVVKALPTV----------AIDQDLQCAVCLEEFVMGNEAKEMP-CKHKFHGECIMPWL 247
KEVV+A PT A L+CAVCL EF +E + +P C H FH +CI PWL
Sbjct: 106 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 248 ELQSSCPICRYQL 260
+CP+CR L
Sbjct: 166 AAAVTCPLCRANL 178
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 204 ALPTVAIDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
AL T++ CA+CLE+++ G E + +PC H+FH +C+ PWL +CP CR+ +
Sbjct: 278 ALDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
Query: 199 KEVVKALPTV-----AIDQDLQ--CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQS 251
KE + L T +ID +L C+VC+ ++V GN+ +++PC H+FH CI WL
Sbjct: 608 KEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENC 667
Query: 252 SCPICR 257
+CPICR
Sbjct: 668 TCPICR 673
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 9/61 (14%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSGNR 275
C+VC+ E+ GN+ +++PC H++H CI WL S+CPICR + + SGNR
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLA---------SGNR 620
Query: 276 E 276
E
Sbjct: 621 E 621
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 11/103 (10%)
Query: 178 DLLLQHLLENDPNRYGSLPAQKEVVKALPTV------AIDQDLQCAVCLEEFVMGNEAKE 231
D L Q L N +R+ L K+ +++LP + Q L+C+VCL +F +
Sbjct: 83 DRLWQGLF-NRSSRFSGL--DKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRL 139
Query: 232 MP-CKHKFHGECIMPWLELQSSCPICRYQLP-SDDLKVQGNGS 272
+P C+H FH CI WLE ++CP+CR ++ DDL V GN S
Sbjct: 140 LPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIEDDLSVLGNSS 182
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICR 257
C+VC+ E+ GN+ +++PC H++H CI WL S+CPICR
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 609
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICR 257
C+VC+ E+ GN+ +++PC H++H CI WL S+CPICR
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 626
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICR 257
C+VC+ E+ GN+ +++PC H++H CI WL S+CPICR
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICR 744
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQLPSDDLKVQGNGSG 273
CA+CLE+++ G E + +PC H+FH +C+ PWL +CP CR+ + ++ +GN S
Sbjct: 293 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNI----IEQKGNPSA 346
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
CA+CLE+++ G E + +PC H+FH +C+ PWL +CP CR+ +
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNI 311
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 212 QDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
+D C +CL + G E +PC H FH CI+ WL+++++CP+C+Y +
Sbjct: 303 EDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 216 CAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
CA+CLE+++ G E + +PC H+FH C+ PWL +CP CR+ +
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNI 310
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 210 IDQDLQCAVCLEEFVMGNEAKEMPCKHKFHGECIMPWLELQSSCPICRYQL 260
+ +D +C +CL + G E +E+PC H FH C+ WL + ++CP+C+Y +
Sbjct: 347 LQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYNI 397
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,876,592
Number of Sequences: 539616
Number of extensions: 6010660
Number of successful extensions: 17054
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 16503
Number of HSP's gapped (non-prelim): 679
length of query: 347
length of database: 191,569,459
effective HSP length: 118
effective length of query: 229
effective length of database: 127,894,771
effective search space: 29287902559
effective search space used: 29287902559
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)