Your job contains 1 sequence.
>036252
MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT
MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA
PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK
LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA
PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEK
KEEPAEESDDDMGLSLFD
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036252
(318 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083564 - symbol:AT3G09200 species:3702 "Arabi... 1120 1.5e-113 1
TAIR|locus:2061231 - symbol:AT2G40010 species:3702 "Arabi... 1119 1.9e-113 1
TAIR|locus:2074623 - symbol:AT3G11250 species:3702 "Arabi... 1109 2.2e-112 1
FB|FBgn0000100 - symbol:RpLP0 "Ribosomal protein LP0" spe... 793 6.8e-79 1
RGD|621247 - symbol:Rplp0 "ribosomal protein, large, P0" ... 775 5.5e-77 1
UNIPROTKB|F1PUX4 - symbol:RPLP0 "Uncharacterized protein"... 770 1.9e-76 1
UNIPROTKB|P47826 - symbol:RPLP0 "60S acidic ribosomal pro... 769 2.4e-76 1
UNIPROTKB|P05388 - symbol:RPLP0 "60S acidic ribosomal pro... 769 2.4e-76 1
UNIPROTKB|Q29214 - symbol:RPLP0 "60S acidic ribosomal pro... 768 3.1e-76 1
MGI|MGI:1927636 - symbol:Rplp0 "ribosomal protein, large,... 768 3.1e-76 1
UNIPROTKB|Q95140 - symbol:RPLP0 "60S acidic ribosomal pro... 765 6.3e-76 1
ZFIN|ZDB-GENE-000629-1 - symbol:rplp0 "ribosomal protein,... 754 9.3e-75 1
UNIPROTKB|F1MDN4 - symbol:RPLP0 "60S acidic ribosomal pro... 748 4.0e-74 1
UNIPROTKB|Q8NHW5 - symbol:RPLP0P6 "60S acidic ribosomal p... 748 4.0e-74 1
WB|WBGene00004408 - symbol:rla-0 species:6239 "Caenorhabd... 725 1.1e-71 1
UNIPROTKB|E2RLZ4 - symbol:E2RLZ4 "Uncharacterized protein... 707 8.9e-70 1
CGD|CAL0001932 - symbol:RPP0 species:5476 "Candida albica... 706 1.1e-69 1
UNIPROTKB|F1NB66 - symbol:RPLP0 "60S acidic ribosomal pro... 686 1.5e-67 1
UNIPROTKB|F1M2B8 - symbol:F1M2B8 "Uncharacterized protein... 685 1.9e-67 1
ASPGD|ASPL0000036346 - symbol:AN2734 species:162425 "Emer... 679 8.2e-67 1
UNIPROTKB|F8VU65 - symbol:RPLP0 "60S acidic ribosomal pro... 670 7.4e-66 1
POMBASE|SPCC18.14c - symbol:rpp0 "60S acidic ribosomal pr... 659 1.1e-64 1
SGD|S000004332 - symbol:RPP0 "Conserved ribosomal protein... 655 2.9e-64 1
UNIPROTKB|F8VW21 - symbol:RPLP0 "60S acidic ribosomal pro... 644 4.2e-63 1
GENEDB_PFALCIPARUM|PF11_0313 - symbol:PF11_0313 "ribosoma... 621 1.2e-60 1
UNIPROTKB|Q8II61 - symbol:PF11_0313 "60S ribosomal protei... 621 1.2e-60 1
RGD|1564469 - symbol:RGD1564469 "similar to Acidic riboso... 601 1.5e-58 1
UNIPROTKB|F8VZS0 - symbol:RPLP0 "60S acidic ribosomal pro... 364 2.3e-56 2
DICTYBASE|DDB_G0286501 - symbol:rplP0 "60S acidic ribosom... 564 1.3e-54 1
UNIPROTKB|J9P5Q4 - symbol:J9P5Q4 "Uncharacterized protein... 531 3.7e-54 2
UNIPROTKB|Q3B7A4 - symbol:RPLP0 "60S acidic ribosomal pro... 384 9.9e-54 2
UNIPROTKB|F1LWD6 - symbol:F1LWD6 "Uncharacterized protein... 513 3.2e-49 1
UNIPROTKB|F8VPE8 - symbol:RPLP0 "60S acidic ribosomal pro... 409 3.4e-38 1
UNIPROTKB|F8VWS0 - symbol:RPLP0 "60S acidic ribosomal pro... 384 1.5e-35 1
UNIPROTKB|G3V210 - symbol:RPLP0 "60S acidic ribosomal pro... 384 1.5e-35 1
UNIPROTKB|F8VRK7 - symbol:RPLP0 "60S acidic ribosomal pro... 344 2.6e-31 1
UNIPROTKB|F8VQY6 - symbol:RPLP0 "60S acidic ribosomal pro... 339 8.8e-31 1
UNIPROTKB|F1LXL8 - symbol:F1LXL8 "Uncharacterized protein... 282 9.7e-25 1
UNIPROTKB|F8VWV4 - symbol:RPLP0 "60S acidic ribosomal pro... 273 8.7e-24 1
UNIPROTKB|F8VS58 - symbol:RPLP0 "60S acidic ribosomal pro... 236 7.2e-20 1
UNIPROTKB|F8W1K8 - symbol:RPLP0 "60S acidic ribosomal pro... 191 4.2e-15 1
ZFIN|ZDB-GENE-050417-142 - symbol:mrto4 "mRNA turnover 4 ... 176 7.4e-13 1
UNIPROTKB|F1M7E2 - symbol:F1M7E2 "Uncharacterized protein... 168 2.1e-12 1
WB|WBGene00017347 - symbol:F10E7.5 species:6239 "Caenorha... 162 1.0e-11 1
FB|FBgn0033485 - symbol:RpLP0-like "Ribosomal protein LP0... 169 4.2e-11 1
UNIPROTKB|F1P353 - symbol:MRTO4 "Uncharacterized protein"... 168 4.5e-11 1
MGI|MGI:1917152 - symbol:Mrto4 "MRT4, mRNA turnover 4, ho... 162 2.0e-10 1
UNIPROTKB|F1SUQ2 - symbol:MRTO4 "Uncharacterized protein"... 158 7.7e-10 1
UNIPROTKB|A4FV84 - symbol:MRTO4 "mRNA turnover protein 4 ... 157 1.0e-09 1
UNIPROTKB|Q9UKD2 - symbol:MRTO4 "mRNA turnover protein 4 ... 156 1.4e-09 1
RGD|1311709 - symbol:Mrto4 "mRNA turnover 4 homolog (S. c... 147 1.6e-09 1
UNIPROTKB|E2RG17 - symbol:MRTO4 "Uncharacterized protein"... 155 1.9e-09 1
TAIR|locus:2032970 - symbol:AT1G25260 "AT1G25260" species... 148 1.4e-08 1
UNIPROTKB|G4MVM1 - symbol:MGG_08908 "mRNA turnover protei... 145 4.7e-08 1
SGD|S000001492 - symbol:MRT4 "Protein involved in mRNA tu... 140 1.5e-07 1
UNIPROTKB|J9NSQ8 - symbol:MRTO4 "Uncharacterized protein"... 133 2.3e-07 1
ASPGD|ASPL0000002010 - symbol:AN6902 species:162425 "Emer... 139 2.4e-07 1
POMBASE|SPBC11G11.03 - symbol:mrt4 "mRNA turnover and rib... 130 2.7e-06 1
DICTYBASE|DDB_G0276411 - symbol:mrt4 "mRNA turnover prote... 123 1.4e-05 1
UNIPROTKB|E2QYG0 - symbol:E2QYG0 "Uncharacterized protein... 121 2.8e-05 1
UNIPROTKB|F1M970 - symbol:F1M970 "Uncharacterized protein... 118 6.4e-05 1
CGD|CAL0006176 - symbol:MRT4 species:5476 "Candida albica... 117 8.2e-05 1
UNIPROTKB|Q5AC00 - symbol:MRT4 "Potential rRNA processing... 117 8.2e-05 1
>TAIR|locus:2083564 [details] [associations]
symbol:AT3G09200 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840 "ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0006414
"translational elongation" evidence=IEA;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009409 "response to cold" evidence=IEP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0010043
"response to zinc ion" evidence=IEP] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G09200.1 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0010043 GO:GO:0048046 GO:GO:0009651 GO:GO:0009409
GO:GO:0005507 GO:GO:0042254 GO:GO:0003735 GO:GO:0022626
EMBL:AC011436 GO:GO:0006414 EMBL:AC009326 eggNOG:COG0244
HOGENOM:HOG000210987 KO:K02941 ProtClustDB:CLSN2683388
EMBL:AF370225 EMBL:AY059117 EMBL:AY086582 EMBL:Z26534
IPI:IPI00517961 RefSeq:NP_187531.1 UniGene:At.21866
ProteinModelPortal:Q42112 SMR:Q42112 STRING:Q42112 PaxDb:Q42112
PRIDE:Q42112 ProMEX:Q42112 GeneID:820076 KEGG:ath:AT3G09200
TAIR:At3g09200 InParanoid:Q42112 OMA:AVATEYT PhylomeDB:Q42112
Genevestigator:Q42112 GermOnline:AT3G09200 Uniprot:Q42112
Length = 320
Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
Identities = 213/275 (77%), Positives = 248/275 (90%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+ +KAEKKIAYD +LC+L++EY+QIL+VAADNVGS QLQ+IR GLR S+VLMGKNTMMK
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
RS+R+H+E TGN +LNL+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVAPID
Sbjct: 63 RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
VVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GD+VGSSE+ALL+KL I
Sbjct: 123 VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
+PFSYGL+V SVY+NGSV+SPEVLDLTED + KF +S V SLAL++ YPT+AAAPH
Sbjct: 183 RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
FIN YKN L+ AVATEY+F QA+KVKEYLKDPSKF
Sbjct: 243 FINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277
>TAIR|locus:2061231 [details] [associations]
symbol:AT2G40010 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT2G40010.1 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 EMBL:AF002109
GO:GO:0006414 eggNOG:COG0244 EMBL:BT001919 IPI:IPI00525504
PIR:B84824 RefSeq:NP_181530.1 UniGene:At.28353 UniGene:At.49578
ProteinModelPortal:O04204 SMR:O04204 IntAct:O04204 STRING:O04204
GeneID:818589 KEGG:ath:AT2G40010 TAIR:At2g40010
HOGENOM:HOG000210987 InParanoid:O04204 KO:K02941 OMA:APIFEKD
PhylomeDB:O04204 ProtClustDB:CLSN2683388 Genevestigator:O04204
GermOnline:AT2G40010 Uniprot:O04204
Length = 317
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 218/317 (68%), Positives = 258/317 (81%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKI YD++LC+LL EYSQIL+VAADNVGS QLQ+IR GLR S+VLMGKNT
Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
MMKRS+R+HA++TGN+ L+L+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVA
Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGD+VGSSE+ALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL+V SVY+NGSV++PEVL+LTEDD+ KF VS + +L+L+I YPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXX 300
PH F+N YKNVL+ A+ATEYSF QA+ VKE+LKDP+KF
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGGAVVAVAVE 300
Query: 301 XXXXXXXSDDDMGLSLF 317
SD DMG LF
Sbjct: 301 EEAAEE-SDGDMGFDLF 316
>TAIR|locus:2074623 [details] [associations]
symbol:AT3G11250 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
EnsemblPlants:AT3G11250.1 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0016020 GO:GO:0009651 GO:GO:0042254 GO:GO:0003735
GO:GO:0022626 EMBL:AC073395 GO:GO:0006414 HOGENOM:HOG000210987
KO:K02941 ProtClustDB:CLSN2683388 EMBL:AY056150 EMBL:AY091201
EMBL:AY087728 IPI:IPI00523299 RefSeq:NP_187734.1 UniGene:At.17400
ProteinModelPortal:P57691 SMR:P57691 STRING:P57691 PRIDE:P57691
ProMEX:P57691 GeneID:820296 KEGG:ath:AT3G11250 TAIR:At3g11250
InParanoid:P57691 OMA:GGVREKK PhylomeDB:P57691
Genevestigator:P57691 GermOnline:AT3G11250 Uniprot:P57691
Length = 323
Score = 1109 (395.4 bits), Expect = 2.2e-112, P = 2.2e-112
Identities = 210/275 (76%), Positives = 248/275 (90%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+ +KAEKKIAYD +LC+L++EY+QIL+VAADNVGS QLQ+IR GLR S+VLMGKNTMMK
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
RS+R+H+E +GN +LNL+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVAPID
Sbjct: 63 RSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
VVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GD+VGSSE+ALL+KL I
Sbjct: 123 VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
+PFSYGL+V SVY+NGSV+SPEVLDLTED + KF +S V SLAL++ YPT+AAAPH
Sbjct: 183 RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
FIN YKN L+ AVAT+Y+F QA+KVKE+LKDPSKF
Sbjct: 243 FINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
>FB|FBgn0000100 [details] [associations]
symbol:RpLP0 "Ribosomal protein LP0" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] [GO:0006281 "DNA repair" evidence=NAS]
[GO:0005840 "ribosome" evidence=IDA;NAS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005634 EMBL:AE014296 GO:GO:0005811 GO:GO:0006281
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0003906
GO:GO:0006414 eggNOG:COG0244 KO:K02941 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:M25772 EMBL:AY075528
EMBL:BT021447 PIR:A30223 RefSeq:NP_524211.1 UniGene:Dm.7933
ProteinModelPortal:P19889 SMR:P19889 DIP:DIP-21968N IntAct:P19889
MINT:MINT-235412 STRING:P19889 PaxDb:P19889 PRIDE:P19889
EnsemblMetazoa:FBtr0078481 EnsemblMetazoa:FBtr0334113 GeneID:40451
KEGG:dme:Dmel_CG7490 FlyBase:FBgn0000100 InParanoid:P19889
OrthoDB:EOG4J6Q6N PhylomeDB:P19889 GenomeRNAi:40451 NextBio:818852
Bgee:P19889 GermOnline:CG7490 Uniprot:P19889
Length = 317
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 155/317 (48%), Positives = 211/317 (66%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +KA K Y ++ +L +E+ + IV ADNVGS Q+Q+IR LR ++VLMGKNTMM+
Sbjct: 3 RENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTKGDL EV D++ + KV APAR G +AP+
Sbjct: 63 KAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GD+VG+SE+ LL+ L I
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGLIV VY++GS++SPE+LD+ +D+ KF + V+ +A++ LS+ YPTIA+APH
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXX- 302
NG+KN+L+ A TE F +A +KEY+KDPSKF
Sbjct: 241 IANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKP 300
Query: 303 -XXXXXSDDDMGLSLFD 318
DDDMG LFD
Sbjct: 301 ESESEEEDDDMGFGLFD 317
>RGD|621247 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO;ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0071353 "cellular response to
interleukin-4" evidence=ISO] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 RGD:621247 GO:GO:0005634 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0030529
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:X15096 EMBL:Z29530
EMBL:BC062028 IPI:IPI00200147 PIR:S08021 RefSeq:NP_071797.1
UniGene:Rn.1079 ProteinModelPortal:P19945 SMR:P19945 IntAct:P19945
STRING:P19945 PhosphoSite:P19945 PRIDE:P19945
Ensembl:ENSRNOT00000001518 GeneID:64205 KEGG:rno:64205
InParanoid:P19945 NextBio:612910 Genevestigator:P19945
GermOnline:ENSRNOG00000001148 Uniprot:P19945
Length = 317
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 156/317 (49%), Positives = 207/317 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+YSPEVLD+TE + T+FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXX 301
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEA 300
Query: 302 XXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>UNIPROTKB|F1PUX4 [details] [associations]
symbol:RPLP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 KO:K02941 CTD:6175 GeneTree:ENSGT00390000017839
OMA:AYMHAFN EMBL:AAEX03014732 RefSeq:NP_001239066.1
Ensembl:ENSCAFT00000016229 GeneID:609159 KEGG:cfa:609159
Uniprot:F1PUX4
Length = 317
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 154/317 (48%), Positives = 208/317 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXX 301
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEA 300
Query: 302 XXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>UNIPROTKB|P47826 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 EMBL:L28704
IPI:IPI00588222 PIR:I50151 RefSeq:NP_990318.1 UniGene:Gga.33624
ProteinModelPortal:P47826 SMR:P47826 STRING:P47826 PRIDE:P47826
GeneID:395835 KEGG:gga:395835 InParanoid:P47826 NextBio:20815903
Uniprot:P47826
Length = 316
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 154/316 (48%), Positives = 207/316 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + +V ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP D
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + +FLE V VAS+ L I YPTIA+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXX-X 302
+NGYK VL+ AV T+Y+F A+KVK +L DPS F
Sbjct: 241 IVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPK 300
Query: 303 XXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 EESEESDEDMGFGLFD 316
>UNIPROTKB|P05388 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006412 "translation"
evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0005634
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0000184 GO:GO:0006413
GO:GO:0042254 GO:GO:0003723 GO:GO:0003735 GO:GO:0006415
GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625
GO:GO:0019083 eggNOG:COG0244 EMBL:AC004263 KO:K02941 HPA:HPA003512
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:M17885 EMBL:BC000087 EMBL:BC000345 EMBL:BC000752 EMBL:BC001127
EMBL:BC001834 EMBL:BC003655 EMBL:BC005863 EMBL:BC008092
EMBL:BC008594 EMBL:BC009867 EMBL:BC015173 EMBL:BC015690
EMBL:AB007187 IPI:IPI00008530 PIR:A27125 RefSeq:NP_000993.1
RefSeq:NP_444505.1 UniGene:Hs.546285 ProteinModelPortal:P05388
SMR:P05388 IntAct:P05388 MINT:MINT-193149 STRING:P05388
PhosphoSite:P05388 DMDM:133041 REPRODUCTION-2DPAGE:P05388
PaxDb:P05388 PRIDE:P05388 DNASU:6175 Ensembl:ENST00000228306
Ensembl:ENST00000392514 Ensembl:ENST00000551150 GeneID:6175
KEGG:hsa:6175 UCSC:uc001txp.3 GeneCards:GC12M120634 HGNC:HGNC:10371
MIM:180510 neXtProt:NX_P05388 PharmGKB:PA34772 InParanoid:P05388
PhylomeDB:P05388 ChiTaRS:RPLP0 GenomeRNAi:6175 NextBio:23989
ArrayExpress:P05388 Bgee:P05388 CleanEx:HS_RPLP0
Genevestigator:P05388 GermOnline:ENSG00000089157 Uniprot:P05388
Length = 317
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 153/317 (48%), Positives = 208/317 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXX 301
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEA 300
Query: 302 XXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>UNIPROTKB|Q29214 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9823
"Sus scrofa" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:DQ316319 EMBL:F14800 RefSeq:NP_001092068.1
UniGene:Ssc.53738 ProteinModelPortal:Q29214 SMR:Q29214
STRING:Q29214 GeneID:100049695 KEGG:ssc:100049695
ArrayExpress:Q29214 Uniprot:Q29214
Length = 318
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 154/318 (48%), Positives = 208/318 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAAPAKVE 300
Query: 304 X---XXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 AKEESEESDEDMGFGLFD 318
>MGI|MGI:1927636 [details] [associations]
symbol:Rplp0 "ribosomal protein, large, P0" species:10090
"Mus musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0071353 "cellular response to interleukin-4" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
MGI:MGI:1927636 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0071353
GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 CTD:6175 OMA:AYMHAFN
EMBL:X15267 EMBL:AK010267 EMBL:AK012606 EMBL:AK029816 EMBL:AK081678
EMBL:BC003833 EMBL:BC011106 EMBL:BC011291 IPI:IPI00314950
PIR:S05305 RefSeq:NP_031501.1 UniGene:Mm.371545 UniGene:Mm.5286
ProteinModelPortal:P14869 SMR:P14869 IntAct:P14869 STRING:P14869
PhosphoSite:P14869 PaxDb:P14869 PRIDE:P14869
Ensembl:ENSMUST00000086519 GeneID:11837 KEGG:mmu:11837
InParanoid:P14869 NextBio:279771 Bgee:P14869 CleanEx:MM_RPLP0
Genevestigator:P14869 GermOnline:ENSMUSG00000067274 Uniprot:P14869
Length = 317
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 154/317 (48%), Positives = 206/317 (64%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+Y+PEVLD+TE + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
INGYK VL+ +V TEY+F +KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETEYTFPLTEKVKAFLADPSAFAAAAPAAAATTAAPAAAAAPAKAEA 300
Query: 304 XXXX--SDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>UNIPROTKB|Q95140 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0030529
"ribonucleoprotein complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0005634 GO:GO:0005737 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0030529 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 HOVERGEN:HBG000711
OrthoDB:EOG4VDQ10 EMBL:BT021080 EMBL:BC102074 EMBL:U75275
EMBL:AF013214 IPI:IPI00703564 RefSeq:NP_001012700.1 UniGene:Bt.8462
ProteinModelPortal:Q95140 SMR:Q95140 STRING:Q95140 PRIDE:Q95140
GeneID:286868 KEGG:bta:286868 CTD:6175 NextBio:20806517
Uniprot:Q95140
Length = 318
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 153/318 (48%), Positives = 208/318 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAAPAAAPAATTAAPAKVE 300
Query: 304 X---XXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 AKEESEESDEDMGFGLFD 318
>ZFIN|ZDB-GENE-000629-1 [details] [associations]
symbol:rplp0 "ribosomal protein, large, P0"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
ZFIN:ZDB-GENE-000629-1 GO:GO:0042254 GO:GO:0005840 GO:GO:0009790
GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244 HOGENOM:HOG000210987
HOVERGEN:HBG000711 OrthoDB:EOG4VDQ10 EMBL:AF134852 IPI:IPI00497680
UniGene:Dr.55617 ProteinModelPortal:Q9PV90 SMR:Q9PV90 STRING:Q9PV90
PRIDE:Q9PV90 InParanoid:Q9PV90 NextBio:20892355 Uniprot:Q9PV90
Length = 319
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 157/319 (49%), Positives = 206/319 (64%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL+++ + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL EV D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLA- 182
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 183 --IKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
I PFSYGLI+ VY+NGSVYSPEVLD+TED + +FL+ V +AS+ L I YPT+A+
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASI 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXX 300
PH INGYK VL+ V T+Y+F A+KVK YL DP+ F
Sbjct: 241 PHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEE 300
Query: 301 X-XXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 APKEDSEESDEDMGFGLFD 319
>UNIPROTKB|F1MDN4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625 IPI:IPI00703564
GeneTree:ENSGT00390000017839 OMA:AYMHAFN EMBL:DAAA02045445
Ensembl:ENSBTAT00000055086 ArrayExpress:F1MDN4 Uniprot:F1MDN4
Length = 320
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 145/275 (52%), Positives = 199/275 (72%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>UNIPROTKB|Q8NHW5 [details] [associations]
symbol:RPLP0P6 "60S acidic ribosomal protein P0-like"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006414 "translational elongation"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428
Pfam:PF00466 GO:GO:0005737 EMBL:CH471053 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
HOGENOM:HOG000210987 EMBL:AY064377 EMBL:CR596098 IPI:IPI00871646
ProteinModelPortal:Q8NHW5 SMR:Q8NHW5 IntAct:Q8NHW5
MINT:MINT-1143683 STRING:Q8NHW5 PhosphoSite:Q8NHW5 DMDM:74723863
PaxDb:Q8NHW5 PRIDE:Q8NHW5 GeneCards:GC02P038709 H-InvDB:HIX0029989
H-InvDB:HIX0161916 HGNC:HGNC:36404 HPA:HPA003512 neXtProt:NX_Q8NHW5
HOVERGEN:HBG000711 InParanoid:Q8NHW5 OrthoDB:EOG4VDQ10
PhylomeDB:Q8NHW5 ArrayExpress:Q8NHW5 Genevestigator:Q8NHW5
Uniprot:Q8NHW5
Length = 317
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 151/317 (47%), Positives = 203/317 (64%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR +VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P + GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD TE+ + ++FLE V VAS+ L YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXX 301
INGYK VL+ +V T+Y+F A+ VK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAAPVAADTTAAPAAAAAPAKVEA 300
Query: 302 XXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>WB|WBGene00004408 [details] [associations]
symbol:rla-0 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0009792 GO:GO:0040007 GO:GO:0006915 GO:GO:0002119
GO:GO:0000003 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 eggNOG:COG0244 EMBL:Z79754 HOGENOM:HOG000210987
KO:K02941 PIR:T21351 RefSeq:NP_492766.1 ProteinModelPortal:Q93572
SMR:Q93572 DIP:DIP-26018N IntAct:Q93572 MINT:MINT-1046682
STRING:Q93572 World-2DPAGE:0011:Q93572 World-2DPAGE:0020:Q93572
PaxDb:Q93572 EnsemblMetazoa:F25H2.10.1 EnsemblMetazoa:F25H2.10.2
GeneID:172943 KEGG:cel:CELE_F25H2.10 UCSC:F25H2.10.1 CTD:172943
WormBase:F25H2.10 GeneTree:ENSGT00390000017839 InParanoid:Q93572
OMA:AYMHAFN NextBio:877621 Uniprot:Q93572
Length = 312
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 140/315 (44%), Positives = 203/315 (64%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R ++ K Y +L +L EEY + L+V DNVGS Q+Q IR +R H+ +LMGKNTM++
Sbjct: 3 REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
+++R H + N L L+P + NVG +FTK DL E+ ++ +++ APA+ G +AP D
Sbjct: 63 KALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LIK+GD+VG+SESALL+ L +
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGL+V VY++G++Y+PEVLD+T +++ +FL V VAS++L++ YPT+A+ H
Sbjct: 181 TPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
NG +N+L A T+ SF +A+ +K ++ DPSKF
Sbjct: 241 LANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKFAAAAPAAAAAPAAAAPAAKKEEPKE 300
Query: 304 XXXXSDDDMGLSLFD 318
SDDDMG LFD
Sbjct: 301 E---SDDDMGFGLFD 312
>UNIPROTKB|E2RLZ4 [details] [associations]
symbol:E2RLZ4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03014742
Ensembl:ENSCAFT00000016673 OMA:GSIYNTE Uniprot:E2RLZ4
Length = 316
Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
Identities = 146/316 (46%), Positives = 201/316 (63%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR L +++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLCRNAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLSEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +T FFQ L I TKI +GT+EI++ V+LIK D+ G+S++ LL+ L I
Sbjct: 121 VTVPALNTGLGPEKTFFFQALGITTKIFRGTIEILSYVQLIKTRDKAGASQATLLNILNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS GLI+ V++NGS+Y+ EVLD+TE+ + ++FLE V +AS+ L I YPT+A+ PH
Sbjct: 181 SPFSSGLIIQQVFDNGSIYNTEVLDITEETLHSRFLEGVRNIASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXX-XXXXX 302
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKWVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAADPAKVEA 300
Query: 303 XXXXXSDDDMGLSLFD 318
SD DMG LF+
Sbjct: 301 KEELESDKDMGFGLFN 316
>CGD|CAL0001932 [details] [associations]
symbol:RPP0 species:5476 "Candida albicans" [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0070180 "LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal
large subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 CGD:CAL0001932
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000024
GO:GO:0006414 eggNOG:COG0244 KO:K02941 RefSeq:XP_720309.1
RefSeq:XP_888730.1 STRING:Q5AFQ4 GeneID:3638023 GeneID:3704214
KEGG:cal:CaO19.7015 KEGG:cal:CaO19_7015 Uniprot:Q5AFQ4
Length = 312
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 135/310 (43%), Positives = 199/310 (64%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
EKK+ Y ++L +LLEEY I +V DNV S Q+ IR LR ++VLMGKNTM++R+IR
Sbjct: 6 EKKVQYFSKLRELLEEYKSIFVVGVDNVSSQQMHEIRKALRGDAVVLMGKNTMVRRAIRG 65
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
+ L+P ++GNVG IFT GDLK + D V + VAAPAR G VAP DV +P
Sbjct: 66 FLSELPEFE--KLLPFIKGNVGFIFTNGDLKSIRDIVVSNVVAAPARAGAVAPKDVWIPA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSY 188
GNTG++P +TSFFQ L +PTKI +GT+EI++ V+++++ +VG SE+ LL+ L I PF+Y
Sbjct: 124 GNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVEQDAKVGPSEATLLNMLNISPFTY 183
Query: 189 GLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGY 248
G+ V+ VY+NG V+ +LD+T+D++ + F+ A++ +AS++L+ YPT+ + H IN Y
Sbjct: 184 GMSVVQVYDNGQVFPSSILDITDDELISHFVSAINTIASISLAAGYPTLPSVGHSIINNY 243
Query: 249 KNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 308
KNVL+ +VAT+Y++ ++ VK+ L +P + S
Sbjct: 244 KNVLALSVATDYTYEGSEAVKDRLANPEAYAAAAPAAAAAGGAAEEAATEEAAADEEE-S 302
Query: 309 DDDMGLSLFD 318
DDDMG LFD
Sbjct: 303 DDDMGFGLFD 312
>UNIPROTKB|F1NB66 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9031
"Gallus gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0005634 GO:GO:0042254 GO:GO:0022625
GeneTree:ENSGT00390000017839 OMA:AYMHAFN IPI:IPI00588222
EMBL:AADN02043198 EMBL:AADN02043197 Ensembl:ENSGALT00000011731
Uniprot:F1NB66
Length = 253
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 134/253 (52%), Positives = 181/253 (71%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + +V ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP D
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + +FLE V VAS+ L I YPTIA+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHS 240
Query: 244 FINGYKNVLSFAV 256
+NGYK VL AV
Sbjct: 241 IVNGYKRVLGVAV 253
>UNIPROTKB|F1M2B8 [details] [associations]
symbol:F1M2B8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414 IPI:IPI00951976
Ensembl:ENSRNOT00000041352 Uniprot:F1M2B8
Length = 297
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 140/268 (52%), Positives = 189/268 (70%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR+ ++VLMGKNTMM+++IR H
Sbjct: 10 KSNYFLKIIQLLDDYPKGFIVGADNVGSKQMQQIRMSLREKAVVLMGKNTMMRKAIRGHL 69
Query: 71 ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGN 130
E NR L L+P ++GNVG +FTK DL E+ D + +KV AR G + P +V VP N
Sbjct: 70 EN--NRALKKLLPHIRGNVGFMFTKEDL-EIRDMMLANKVPVAARAGAITPCEVTVPAQN 126
Query: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGL 190
TGL P + L I TKI++GT+EI++ V+LIK GD+VG+SE+ LLS L I PFS+GL
Sbjct: 127 TGLGPEKA-----LGITTKISRGTIEILSDVQLIKTGDKVGASEATLLSMLNISPFSFGL 181
Query: 191 IVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKN 250
I+ V++NGS+YSPEVLD TE + ++FLE V VA + L I YPT+A+ PH INGYK
Sbjct: 182 IIQQVFDNGSIYSPEVLD-TEQALHSRFLEGVCNVAGVCLQIGYPTVASVPHSIINGYKR 240
Query: 251 VLSFAVATEYSFSQADKVKEYLKDPSKF 278
VL+ +V T+Y+FS A+KVK +L DPS F
Sbjct: 241 VLALSVETDYTFSVAEKVKAFLADPSAF 268
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 84/177 (47%), Positives = 113/177 (63%)
Query: 142 QVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSV 201
+ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LLS L I PFS+GLI+ V++NGS+
Sbjct: 133 KALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLSMLNISPFSFGLIIQQVFDNGSI 192
Query: 202 YSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYS 261
YSPEVLD TE + ++FLE V VA + L I YPT+A+ PH INGYK VL+ +V T+Y+
Sbjct: 193 YSPEVLD-TEQALHSRFLEGVCNVAGVCLQIGYPTVASVPHSIINGYKRVLALSVETDYT 251
Query: 262 FSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGLSLFD 318
FS A+KVK +L DPS F D+D+G LFD
Sbjct: 252 FSVAEKVKAFLADPSAFAAAAPAPAKAEAKEESEE-----------PDEDVGFGLFD 297
>ASPGD|ASPL0000036346 [details] [associations]
symbol:AN2734 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0070180
"LSU rRNA binding" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 EMBL:BN001306
GO:GO:0042254 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
EMBL:AACD01000048 RefSeq:XP_660338.1 STRING:Q5B9P6
EnsemblFungi:CADANIAT00010379 GeneID:2874227 KEGG:ani:AN2734.2
Uniprot:Q5B9P6
Length = 312
Score = 679 (244.1 bits), Expect = 8.2e-67, P = 8.2e-67
Identities = 129/312 (41%), Positives = 194/312 (62%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
K+ K AY +L LL+EY + IV DNV S Q+ IR LR +VLMGKNTM++R++
Sbjct: 4 KSATKAAYFEKLKNLLDEYKTVFIVGVDNVSSQQMHEIRIALRGEGVVLMGKNTMVRRAL 63
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
+ N + L+P ++GNVG IFT GDLKE D++ ++VAAPAR G VAP DV +
Sbjct: 64 KGFIN--DNPEYERLLPHVKGNVGFIFTNGDLKETKDKILSNRVAAPARAGAVAPADVWI 121
Query: 127 PPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPF 186
P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L+++G++VG SE+ LL+ L I PF
Sbjct: 122 PAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEEGNKVGPSEATLLNMLNISPF 181
Query: 187 SYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFIN 246
+YG+ + VY++G +S VLD+ E+ + F A++ + S++L++ YPT+ + H +N
Sbjct: 182 TYGMTIQQVYQDGQTFSAAVLDIEEEQLLKVFSSAINTITSISLAVNYPTLPSVIHSVVN 241
Query: 247 GYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 306
YK VL+ AV TEYS+ + +++K+ + +P +
Sbjct: 242 SYKKVLAVAVETEYSWPEIEELKDRIANPEAYASAAPAAAAGGAAPAAAAEAAPAEEAEE 301
Query: 307 XSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 302 -SDEDMGFGLFD 312
>UNIPROTKB|F8VU65 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022636 ProteinModelPortal:F8VU65 SMR:F8VU65
Ensembl:ENST00000550856 ArrayExpress:F8VU65 Bgee:F8VU65
Uniprot:F8VU65
Length = 247
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 130/246 (52%), Positives = 178/246 (72%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYK 249
INGYK
Sbjct: 241 IINGYK 246
>POMBASE|SPCC18.14c [details] [associations]
symbol:rpp0 "60S acidic ribosomal protein Rpp0
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002182
"cytoplasmic translational elongation" evidence=NAS] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0022626 "cytosolic ribosome"
evidence=NAS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
PomBase:SPCC18.14c EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0042254 GO:GO:0003735 GO:GO:0022626 GO:GO:0002182
eggNOG:COG0244 HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN
PIR:T41157 RefSeq:NP_588393.1 ProteinModelPortal:O74864 SMR:O74864
IntAct:O74864 STRING:O74864 PRIDE:O74864 EnsemblFungi:SPCC18.14c.1
GeneID:2538893 KEGG:spo:SPCC18.14c OrthoDB:EOG4Z39PT
NextBio:20800072 Uniprot:O74864
Length = 312
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 129/314 (41%), Positives = 195/314 (62%)
Query: 5 LSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKR 64
+SK E K Y +L L E+Y+ + +V DNV S Q+ +R LR + ++MGKNTM++R
Sbjct: 3 ISK-ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRR 61
Query: 65 SIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDV 124
++R +L L+P+++GNVG +FT DLKEV + + + +AAPAR +AP+DV
Sbjct: 62 AMR--GIINDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDV 119
Query: 125 VVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIK 184
VP GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K +VG SE+ LL+ L I
Sbjct: 120 FVPAGNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNIS 179
Query: 185 PFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFF 244
PF+YG+ V+++Y+ G+V+SPE+LD++E+D+ L A S + +++L YPTI + H
Sbjct: 180 PFTYGMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSV 239
Query: 245 INGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXX 304
+N YKN+++ ++ATEY+F ++ K +L DPS F
Sbjct: 240 VNAYKNLVAVSLATEYTFEGTEQTKAFLADPSAFVVAAAPAAAAGGEAEAPAAEAAAEEE 299
Query: 305 XXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 300 EE-SDEDMGFGLFD 312
>SGD|S000004332 [details] [associations]
symbol:RPP0 "Conserved ribosomal protein P0 of the ribosomal
stalk" species:4932 "Saccharomyces cerevisiae" [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IDA]
[GO:0070180 "LSU rRNA binding" evidence=IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0000027 "ribosomal large subunit
assembly" evidence=IMP] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 SGD:S000004332 EMBL:BK006945
GO:GO:0003735 GO:GO:0002181 PDB:4B6A PDBsum:4B6A GO:GO:0030686
GO:GO:0000027 EMBL:U19028 PDB:3J16 PDBsum:3J16 GO:GO:0006414
GO:GO:0022625 eggNOG:COG0244 GO:GO:0070180 PDB:3IZS PDB:3O5H
PDB:3U5I PDBsum:3IZS PDBsum:3O5H PDBsum:3U5I HOGENOM:HOG000210987
KO:K02941 GeneTree:ENSGT00390000017839 OrthoDB:EOG4Z39PT
EMBL:X06959 EMBL:D00529 EMBL:X13328 EMBL:M26506 EMBL:M37326
PIR:S51343 RefSeq:NP_013444.1 ProteinModelPortal:P05317 SMR:P05317
DIP:DIP-1582N IntAct:P05317 MINT:MINT-384116 STRING:P05317
SWISS-2DPAGE:P05317 PaxDb:P05317 PeptideAtlas:P05317
EnsemblFungi:YLR340W GeneID:851052 KEGG:sce:YLR340W OMA:PILSTFG
NextBio:967667 Genevestigator:P05317 GermOnline:YLR340W
Uniprot:P05317
Length = 312
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 125/310 (40%), Positives = 195/310 (62%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
EKK Y A+L + LEEY + +V DNV S Q+ +R LR ++VLMGKNTM++R+IR
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR- 64
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
+ D L+P ++GNVG +FT L E+ + + ++VAAPAR G VAP D+ V
Sbjct: 65 -GFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSY 188
NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G++VG SE++LL+ L I PF++
Sbjct: 124 VNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTF 183
Query: 189 GLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGY 248
GL V+ VY+NG V+ +LD+T++++ + F+ AVS +AS++L+I YPT+ + H IN Y
Sbjct: 184 GLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNY 243
Query: 249 KNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 308
K++L+ A+A Y + + + + + +++P K+ S
Sbjct: 244 KDLLAVAIAASYHYPEIEDLVDRIENPEKYAAAAPAATSAASGDAAPAEEAAAEEEEE-S 302
Query: 309 DDDMGLSLFD 318
DDDMG LFD
Sbjct: 303 DDDMGFGLFD 312
>UNIPROTKB|F8VW21 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021320 ProteinModelPortal:F8VW21 SMR:F8VW21
Ensembl:ENST00000547211 ArrayExpress:F8VW21 Bgee:F8VW21
Uniprot:F8VW21
Length = 244
Score = 644 (231.8 bits), Expect = 4.2e-63, P = 4.2e-63
Identities = 123/228 (53%), Positives = 169/228 (74%)
Query: 40 QLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLK 99
Q+Q IR LR ++VLMGKNTMM+++IR H E N L L+P ++GNVG +FTK DL
Sbjct: 19 QMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLT 76
Query: 100 EVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT 159
E+ D + +KV A AR G +AP +V VP NTGL P +TSFFQ L I TKI++GT+EI++
Sbjct: 77 EIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILS 136
Query: 160 PVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFL 219
V+LIK GD+VG+SE+ LL+ L I PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FL
Sbjct: 137 DVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFL 196
Query: 220 EAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADK 267
E V VAS+ L I YPT+A+ PH INGYK VL+ +V T+Y+F A+K
Sbjct: 197 EGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEK 244
>GENEDB_PFALCIPARUM|PF11_0313 [details] [associations]
symbol:PF11_0313 "ribosomal phosphoprotein P0"
species:5833 "Plasmodium falciparum" [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0003735 EMBL:AE014186 GO:GO:0006414 GO:GO:0022625
HOGENOM:HOG000210987 KO:K02941 OMA:AYMHAFN ProtClustDB:PTZ00135
RefSeq:XP_001347984.1 ProteinModelPortal:Q8II61 IntAct:Q8II61
MINT:MINT-1569176 PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA
GeneID:810860 KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200
Uniprot:Q8II61
Length = 316
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 124/316 (39%), Positives = 195/316 (61%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+LSK +KK Y +L L+++YS+ILIV DNVGSNQ+ +R LR + +LMGKNT ++
Sbjct: 3 KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
+++ + + + L+PL++ N+G +F K DL E+ + + +K APAR+G++APID
Sbjct: 63 TALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPID 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V +PPG TG+DPS TSFFQ L I TKI KG +EI V LIK+G++V +S + LL K +
Sbjct: 121 VFIPPGPTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNM 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
KPFSYG+ V +VY++G +Y +VLD+T++DI KF + VS VA+L+ + T A+ PH
Sbjct: 181 KPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHV 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
F+ +KN+++ + ++Y+F + +K+ +++P F
Sbjct: 241 FVEAFKNIVALIIDSDYTFPLMENIKKMVENPEAFAAVAAPASAAKADEPKKEEAKKVEE 300
Query: 304 XXXXSDDD-MGLSLFD 318
+D MG +FD
Sbjct: 301 EEEEEEDGFMGFGMFD 316
>UNIPROTKB|Q8II61 [details] [associations]
symbol:PF11_0313 "60S ribosomal protein P0" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0003735 EMBL:AE014186
GO:GO:0006414 GO:GO:0022625 HOGENOM:HOG000210987 KO:K02941
OMA:AYMHAFN ProtClustDB:PTZ00135 RefSeq:XP_001347984.1
ProteinModelPortal:Q8II61 IntAct:Q8II61 MINT:MINT-1569176
PRIDE:Q8II61 EnsemblProtists:PF11_0313:mRNA GeneID:810860
KEGG:pfa:PF11_0313 EuPathDB:PlasmoDB:PF3D7_1130200 Uniprot:Q8II61
Length = 316
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 124/316 (39%), Positives = 195/316 (61%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+LSK +KK Y +L L+++YS+ILIV DNVGSNQ+ +R LR + +LMGKNT ++
Sbjct: 3 KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
+++ + + + L+PL++ N+G +F K DL E+ + + +K APAR+G++APID
Sbjct: 63 TALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSPAPARLGVIAPID 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V +PPG TG+DPS TSFFQ L I TKI KG +EI V LIK+G++V +S + LL K +
Sbjct: 121 VFIPPGPTGMDPSHTSFFQSLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLQKFNM 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
KPFSYG+ V +VY++G +Y +VLD+T++DI KF + VS VA+L+ + T A+ PH
Sbjct: 181 KPFSYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHV 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 303
F+ +KN+++ + ++Y+F + +K+ +++P F
Sbjct: 241 FVEAFKNIVALIIDSDYTFPLMENIKKMVENPEAFAAVAAPASAAKADEPKKEEAKKVEE 300
Query: 304 XXXXSDDD-MGLSLFD 318
+D MG +FD
Sbjct: 301 EEEEEEDGFMGFGMFD 316
>RGD|1564469 [details] [associations]
symbol:RGD1564469 "similar to Acidic ribosomal phosphoprotein
P0" species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1564469 GO:GO:0042254
GO:GO:0005840 OrthoDB:EOG4VDQ10 GeneTree:ENSGT00390000017839
IPI:IPI00368902 Ensembl:ENSRNOT00000040909 Uniprot:D3ZJT4
Length = 298
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 126/269 (46%), Positives = 179/269 (66%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGK---NTMMKRSIR 67
K Y ++ +LL++Y + I+ ADNV S Q+Q IR L+ ++VLM K N MM+++IR
Sbjct: 10 KSNYFLKIIQLLDDYPKCFIMGADNVSSKQMQQIRMSLQGKAVVLMKKKRKNAMMRKAIR 69
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
H E+ NR L L P +GNVG +FTK DL E+ D + +KV A + G +AP +V
Sbjct: 70 EHLEK--NRALEKLPPHTRGNVGFMFTKEDLTEIRDMLLTNKVPAATQAGALAPCEVTAH 127
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFS 187
NTGL P +TSFFQVL I TKI++G +EI++ V+LIK G++VG+ E+ LL+ I P
Sbjct: 128 AQNTGLGPEKTSFFQVLGINTKISRGIIEILSDVQLIKTGNKVGAGEATLLN---ISPSV 184
Query: 188 YGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFING 247
GLI+ V++NGS+Y+PEVLD+TE + + FLE V VA++ L I PT+ + PH ING
Sbjct: 185 SGLIIRQVFDNGSIYNPEVLDITEQILRSHFLEGVRNVAAVCLQIGEPTVTSVPHSIING 244
Query: 248 YKNVLSFAVATEYSFSQADKVKEYLKDPS 276
K VL+ +V T+Y+F A+KVK +L DPS
Sbjct: 245 SKRVLALSVETDYTFPLAEKVKAFLADPS 273
>UNIPROTKB|F8VZS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001790 InterPro:IPR001813
Pfam:PF00428 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022462 ProteinModelPortal:F8VZS0 SMR:F8VZS0
Ensembl:ENST00000546990 ArrayExpress:F8VZS0 Bgee:F8VZS0
Uniprot:F8VZS0
Length = 246
Score = 364 (133.2 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 66/118 (55%), Positives = 92/118 (77%)
Query: 161 VELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLE 220
V+LIK GD+VG+SE+ LL+ L I PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE
Sbjct: 109 VQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLE 168
Query: 221 AVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
V VAS+ L I YPT+A+ PH INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 169 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 226
Score = 234 (87.4 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 50/106 (47%), Positives = 70/106 (66%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHK 109
++IR H E N L L+P ++GNVG +FTK DL E+ D + +K
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANK 106
>DICTYBASE|DDB_G0286501 [details] [associations]
symbol:rplP0 "60S acidic ribosomal protein P0"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 dictyBase:DDB_G0286501
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0042254 GO:GO:0005840
EMBL:AAFI02000087 GO:GO:0003735 GO:GO:0006414 eggNOG:COG0244
KO:K02941 OMA:AYMHAFN EMBL:X56194 PIR:S14012 RefSeq:XP_637692.1
STRING:P22685 EnsemblProtists:DDB0219977 GeneID:8625658
KEGG:ddi:DDB_G0286501 ProtClustDB:PTZ00135 Uniprot:P22685
Length = 305
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 119/311 (38%), Positives = 180/311 (57%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIR 67
+++K + + KL Y ++++ AD VGS+QLQ IR +R VLMGK TM+++ IR
Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
A+ D LN L+ N +IF K ++ EV ++ +V APA+ G+ AP DV++P
Sbjct: 66 DLADSKPELDALNTY--LKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIP 123
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFS 187
G TG++P+QTSF Q L I TKIN+G ++I+ V +IK G +VG+SE+ LL KL IKPF+
Sbjct: 124 AGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFT 183
Query: 188 YGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFING 247
YGL +Y+ G+ YSP + +E+D+ KF + + +A+++L I YPT+A+ PH +N
Sbjct: 184 YGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNA 240
Query: 248 YKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
+KN+L+ + T Y+F A+K K S
Sbjct: 241 FKNLLAISFETSYTFDAAEKFK------SAAAAAPVAAAPSAAAPAAAAKKVVVEEKKEE 294
Query: 308 SDDDMGLSLFD 318
SDDDMG+ LFD
Sbjct: 295 SDDDMGMGLFD 305
>UNIPROTKB|J9P5Q4 [details] [associations]
symbol:J9P5Q4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 GeneTree:ENSGT00390000017839 EMBL:AAEX03007598
Ensembl:ENSCAFT00000048593 OMA:EESVESC Uniprot:J9P5Q4
Length = 267
Score = 531 (192.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 109/233 (46%), Positives = 143/233 (61%)
Query: 88 NVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIP 147
NVG +FTK DL E+ D + KV A AR G +AP + VP NTGL +TSFFQ L I
Sbjct: 35 NVGFVFTKEDLTEMRDMLLADKVPAAARAGAIAPCEDTVPAQNTGLGAKRTSFFQALGIT 94
Query: 148 TKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVL 207
TKI++GT EI+ V+LIK D+VG+SE+ LL+ L I PFS+GLIV V++NGS+ +PEVL
Sbjct: 95 TKISRGTTEILNDVQLIKARDKVGASEATLLNMLNIPPFSFGLIVQQVFDNGSICTPEVL 154
Query: 208 DLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADK 267
D+TE+ + + FLE V VAS+ L + YPT+A+ PH INGYK + +V T+Y+F A+K
Sbjct: 155 DITEETLQSCFLEGVRSVASVCLQVGYPTVASVPHPIINGYKRGPALSVETDYTFPLAEK 214
Query: 268 VKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGLSLFD 318
VK +L DPS F SD+DMG LFD
Sbjct: 215 VKAFLADPSAFVAAAPMAAATTAAPAAAAAPAKVEAKKESEESDEDMGFGLFD 267
Score = 46 (21.3 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADN-VG 37
R +A K Y ++ +L+++Y + + ADN VG
Sbjct: 3 REDRATWKSNYFLKIIQLVDDYPKCFLAGADNNVG 37
>UNIPROTKB|Q3B7A4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HOGENOM:HOG000210987 HOVERGEN:HBG000711
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0 EMBL:BC107717
IPI:IPI00556485 SMR:Q3B7A4 STRING:Q3B7A4 Ensembl:ENST00000313104
UCSC:uc001txr.3 Uniprot:Q3B7A4
Length = 255
Score = 384 (140.2 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 189 (71.6 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 40/99 (40%), Positives = 50/99 (50%)
Query: 222 VSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXX 281
V VAS+ L I YPT+A+ PH INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 157 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 216
Query: 282 X--XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 217 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 255
>UNIPROTKB|F1LWD6 [details] [associations]
symbol:F1LWD6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790
InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
GeneTree:ENSGT00390000017839 IPI:IPI00561389
Ensembl:ENSRNOT00000047989 Uniprot:F1LWD6
Length = 301
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 122/309 (39%), Positives = 169/309 (54%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
K+ Y L KLL++Y + IV ADNVGS Q+ H+ G R +MGK+TMM ++IR +
Sbjct: 10 KLNYYLVLSKLLDDYPKFFIVGADNVGSKQM-HLSKGRRG----VMGKSTMMHKAIRGYL 64
Query: 71 ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGN 130
E N L L+P +GNV FT DL E+ + KV A A G +A +V N
Sbjct: 65 EN--NPALEKLLPHFRGNVSFAFTTEDLTEIRAMLLTSKVPAAALAGAIASCEVTAHAQN 122
Query: 131 TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGL 190
TGL P +TSFFQ I TKI++ T+EI++ V+LIK GD+VG+SE A + + P
Sbjct: 123 TGLAPEKTSFFQASGITTKISRVTIEILSDVQLIKPGDKVGASEHA---EHPLSPLG--- 176
Query: 191 IVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKN 250
V++NGS+Y+P++LD+T + + FLE V + + L + Y T+A PH I+GYK
Sbjct: 177 ---GVFDNGSIYNPDMLDITNQILHSHFLEGVCNMTRVCLQVGYSTVATGPHSIISGYKQ 233
Query: 251 VLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXSD 309
VL AV T+Y+F A+KV+ L DPS F SD
Sbjct: 234 VL-LAVETDYTFPLAEKVEASLADPSAFAAAAPVAATTTAAPAAAAPVKAEAKEESEESD 292
Query: 310 DDMGLSLFD 318
+DMG LFD
Sbjct: 293 EDMGFGLFD 301
>UNIPROTKB|F8VPE8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01022043 ProteinModelPortal:F8VPE8 SMR:F8VPE8
Ensembl:ENST00000547191 ArrayExpress:F8VPE8 Bgee:F8VPE8
Uniprot:F8VPE8
Length = 153
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 82/151 (54%), Positives = 109/151 (72%)
Query: 20 KLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLL 79
+LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+++IR H E N L
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALE 62
Query: 80 NLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQTS 139
L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +V VP NTGL P +TS
Sbjct: 63 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTS 122
Query: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDRV 170
FFQ L I TKI++GT+EI++ V+LIK GD+V
Sbjct: 123 FFQALGITTKISRGTIEILSDVQLIKTGDKV 153
>UNIPROTKB|F8VWS0 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006414 "translational elongation" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001790 InterPro:IPR001813 Pfam:PF00428 Pfam:PF00466
GO:GO:0005737 GO:GO:0042254 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0
IPI:IPI01022174 ProteinModelPortal:F8VWS0 SMR:F8VWS0 PRIDE:F8VWS0
Ensembl:ENST00000546989 ArrayExpress:F8VWS0 Bgee:F8VWS0
Uniprot:F8VWS0
Length = 281
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 80/256 (31%), Positives = 123/256 (48%)
Query: 70 AERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPG 129
A+ G++ + + L+G ++ K + + + H PA L+ I V
Sbjct: 32 ADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKA--IRGHLENNPALEKLLPHIRGNVGFV 89
Query: 130 NTGLDPSQTSFFQVLN-IPTKINKGTV---EIITPVELIKKGDRVGSSESALLSKLAIKP 185
T D ++ + N +P G + E+ P + G +G +++ L I
Sbjct: 90 FTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQ--NTG--LGPEKTSFFQALGITT 145
Query: 186 -FSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFF 244
S G I + V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 146 KISRGTIEILVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSI 205
Query: 245 INGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXX--XXXXXXXXXXXXXXXXXXXX 302
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 206 INGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAK 265
Query: 303 XXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 266 EESEESDEDMGFGLFD 281
>UNIPROTKB|G3V210 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
EMBL:CH471054 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
UniGene:Hs.546285 HGNC:HGNC:10371 ChiTaRS:RPLP0
ProteinModelPortal:G3V210 SMR:G3V210 PRIDE:G3V210
Ensembl:ENST00000547173 ArrayExpress:G3V210 Bgee:G3V210
Uniprot:G3V210
Length = 166
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 79/155 (50%), Positives = 106/155 (68%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEII 158
V VP NTGL P +TSFFQ L I TKI++GT+EI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>UNIPROTKB|F8VRK7 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021139 ProteinModelPortal:F8VRK7 SMR:F8VRK7
PRIDE:F8VRK7 Ensembl:ENST00000551258 ArrayExpress:F8VRK7
Bgee:F8VRK7 Uniprot:F8VRK7
Length = 156
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 74/149 (49%), Positives = 98/149 (65%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNI--PTKI 150
V VP NTGL P +TSFFQ L + PT I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGVYCPTII 149
>UNIPROTKB|F8VQY6 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01021889 ProteinModelPortal:F8VQY6 SMR:F8VQY6
Ensembl:ENST00000547475 ArrayExpress:F8VQY6 Bgee:F8VQY6
Uniprot:F8VQY6
Length = 142
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/141 (50%), Positives = 94/141 (66%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVL 144
V VP NTGL P +TSFFQ L
Sbjct: 121 VTVPAQNTGLGPEKTSFFQAL 141
>UNIPROTKB|F1LXL8 [details] [associations]
symbol:F1LXL8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00950373 Ensembl:ENSRNOT00000066180
Uniprot:F1LXL8
Length = 151
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 58/113 (51%), Positives = 80/113 (70%)
Query: 165 KKGDRVGSSESALLSKLAIKPFSYGLIVMSVYEN-GSVYSPEVLDLTEDDIATKFLEAVS 223
K G++VG+SE+ LL L I FS+GLI+ V++N GS+Y+PEVL +TE + FLE +
Sbjct: 1 KIGNQVGASEATLLYMLNISTFSFGLIIQQVFDNNGSIYNPEVLHITEQTPYSCFLERIH 60
Query: 224 RVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPS 276
VAS++L I YPT+A+ PH INGYK VL+ V TEY+ A+KVK +L +PS
Sbjct: 61 NVASVSLQIGYPTVASVPHSIINGYKWVLALTVDTEYTSPLAEKVKAFLDNPS 113
>UNIPROTKB|F8VWV4 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005737
GO:GO:0042254 GO:GO:0005840 EMBL:AC004263 HGNC:HGNC:10371
ChiTaRS:RPLP0 IPI:IPI01023074 ProteinModelPortal:F8VWV4 SMR:F8VWV4
Ensembl:ENST00000550423 ArrayExpress:F8VWV4 Bgee:F8VWV4
Uniprot:F8VWV4
Length = 111
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 56/108 (51%), Positives = 75/108 (69%)
Query: 20 KLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLL 79
+LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+++IR H E N L
Sbjct: 5 QLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLEN--NPALE 62
Query: 80 NLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +V VP
Sbjct: 63 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 110
>UNIPROTKB|F8VS58 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0042254 GO:GO:0005840 EMBL:AC004263
HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01020986
ProteinModelPortal:F8VS58 SMR:F8VS58 Ensembl:ENST00000551914
ArrayExpress:F8VS58 Bgee:F8VS58 Uniprot:F8VS58
Length = 121
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 53/115 (46%), Positives = 74/115 (64%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGL 118
++IR H E N L L+P ++GNVG +FTK DL E+ D + +K+ P V L
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKLL-PVLVPL 114
>UNIPROTKB|F8W1K8 [details] [associations]
symbol:RPLP0 "60S acidic ribosomal protein P0" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] InterPro:IPR001813
Pfam:PF00428 GO:GO:0005840 GO:GO:0003735 GO:GO:0006414
EMBL:AC004263 HGNC:HGNC:10371 ChiTaRS:RPLP0 IPI:IPI01021777
ProteinModelPortal:F8W1K8 SMR:F8W1K8 PRIDE:F8W1K8
Ensembl:ENST00000552292 ArrayExpress:F8W1K8 Bgee:F8W1K8
Uniprot:F8W1K8
Length = 107
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 40/101 (39%), Positives = 51/101 (50%)
Query: 220 EAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFX 279
+ V VAS+ L I YPT+A+ PH INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 7 QGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFV 66
Query: 280 XXX--XXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 67 AAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 107
>ZFIN|ZDB-GENE-050417-142 [details] [associations]
symbol:mrto4 "mRNA turnover 4 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466
ZFIN:ZDB-GENE-050417-142 GO:GO:0042254 GO:GO:0005840 CTD:51154
eggNOG:COG0244 HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815
OrthoDB:EOG41C6X4 EMBL:BC092913 IPI:IPI00512586
RefSeq:NP_001017657.1 UniGene:Dr.105236 STRING:Q568C9 GeneID:550350
KEGG:dre:550350 InParanoid:Q568C9 NextBio:20879605
ArrayExpress:Q568C9 Uniprot:Q568C9
Length = 242
Score = 176 (67.0 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 55/215 (25%), Positives = 98/215 (45%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
+A++ + + R C + Y + + + +N+ +N+L+ IR R HS GKN +M ++
Sbjct: 21 EAKQNLIEELRKCA--DIYRYVFVFSVENMRNNKLKDIRTAWR-HSRFFFGKNKVMMIAL 77
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
+L L L+G VG++FT EV + K AR G A + V +
Sbjct: 78 GKGPTDEYKDNLHKLSRFLRGEVGVLFTNKTKDEVQEYFGNFKEVDYARAGNTASMAVTL 137
Query: 127 PPGNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKP 185
G P S + L +PT + KG V +I E+ K+GD + ++ +L +
Sbjct: 138 DEGPLDQFPHSMEPQLRQLGLPTALKKGAVTLIKDFEVCKEGDTLTPEQARILKLFGFEM 197
Query: 186 FSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLE 220
+ L + ++ + S ++ D +DD TK E
Sbjct: 198 AEFKLSIKCMWNSESGEFEKLTDGDDDD-ETKEAE 231
>UNIPROTKB|F1M7E2 [details] [associations]
symbol:F1M7E2 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006414 "translational elongation" evidence=IEA]
InterPro:IPR001813 Pfam:PF00428 GO:GO:0005840 GO:GO:0003735
GO:GO:0006414 IPI:IPI00391041 Ensembl:ENSRNOT00000037986
Uniprot:F1M7E2
Length = 127
Score = 168 (64.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 42/131 (32%), Positives = 64/131 (48%)
Query: 189 GLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRY-PTIAAAPHFFING 247
G+++ V+ NGS+Y+PEVLD++ D +FLE V +AS+ LS + P +
Sbjct: 1 GILIKEVFHNGSLYNPEVLDISADS-HFRFLEGVRHIASVPLSADWLPDCCFRGTLYRQW 59
Query: 248 YKNVLSFAVATEYSFSQADKVKEYLKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
+ +++V TEY+F A+KVK +L +PS F
Sbjct: 60 IQVDPAWSVETEYTFPLAEKVKAFLANPSAFVAAAPVAATTTAAAPAEAETKEVLEE--- 116
Query: 308 SDDDMGLSLFD 318
SD+DMG LFD
Sbjct: 117 SDEDMGFGLFD 127
>WB|WBGene00017347 [details] [associations]
symbol:F10E7.5 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF EMBL:FO081111 PIR:T34209 RefSeq:NP_495470.1
ProteinModelPortal:Q19302 SMR:Q19302 STRING:Q19302 PaxDb:Q19302
EnsemblMetazoa:F10E7.5 GeneID:174168 KEGG:cel:CELE_F10E7.5
UCSC:F10E7.5 CTD:174168 WormBase:F10E7.5 InParanoid:Q19302
NextBio:882821 Uniprot:Q19302
Length = 220
Score = 162 (62.1 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 48/173 (27%), Positives = 83/173 (47%)
Query: 22 LEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGN--RDLL 79
+++Y + I N+ S + IR +++S GKN ++ SI L +++ L
Sbjct: 34 VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVI--SIALGKQKSDEYANQLH 91
Query: 80 NLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-SQT 138
+L+G G++FT KEV E S+ ARVG VA VV+P G S
Sbjct: 92 KASAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSME 151
Query: 139 SFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLI 191
+ L +PTK++KG + + E+ K+G+ + ++ +L +K + LI
Sbjct: 152 PQLRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLI 204
>FB|FBgn0033485 [details] [associations]
symbol:RpLP0-like "Ribosomal protein LP0-like" species:7227
"Drosophila melanogaster" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006412 "translation" evidence=IC] [GO:0003735
"structural constituent of ribosome" evidence=IC] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR001790 Pfam:PF00466 EMBL:AE013599 GO:GO:0042254
GO:GO:0005840 eggNOG:COG0244 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:AY061517 RefSeq:NP_610554.1 UniGene:Dm.12545
SMR:Q7K1Q7 IntAct:Q7K1Q7 STRING:Q7K1Q7 EnsemblMetazoa:FBtr0088425
GeneID:36058 KEGG:dme:Dmel_CG1381 UCSC:CG1381-RA CTD:36058
FlyBase:FBgn0033485 InParanoid:Q7K1Q7 OrthoDB:EOG44TMQV
GenomeRNAi:36058 NextBio:796627 Uniprot:Q7K1Q7
Length = 256
Score = 169 (64.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 55/208 (26%), Positives = 97/208 (46%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI-R 67
+++I D R C + +Y I + N+ ++ L+ +R L+ +S + GKN +M+ + R
Sbjct: 23 KQRIVDDIRFC--VGKYPNIFVFQVQNMRNSLLKDLRQELKKNSRFIFGKNRVMQIGLGR 80
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
+E +L L L G VG++FT +EV + + AR G VA V +P
Sbjct: 81 TKSEEV-EPELHKLSKRLTGQVGLLFTDKSKEEVLEWAENYWAVEYARSGFVATETVTLP 139
Query: 128 PGNT-GLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPF 186
G S + L +PTK+ KG V + + + ++G +V + E A + KL KP
Sbjct: 140 AGPLEDFAHSMEPHLRSLGLPTKLEKGIVTLYSDYTVCEEG-KVLTPEQARILKLVGKPM 198
Query: 187 S-YGLIVMSVYENGSVYSPEVLDLTEDD 213
+ + L + + + V D D+
Sbjct: 199 AKFRLTMKCSWTKSEGFQLHVEDDVNDE 226
>UNIPROTKB|F1P353 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 EMBL:AADN02040697 GeneTree:ENSGT00390000006238
OMA:AWKHSRF IPI:IPI00587586 Ensembl:ENSGALT00000006360
Uniprot:F1P353
Length = 249
Score = 168 (64.2 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
E K A A L + ++ Y I I + N+ +N+L+ +R + HS + GKN +M ++
Sbjct: 28 EAKQALIAELRRCVDTYKHIFIFSVANMRNNKLKDVRNAWK-HSRIFFGKNKVMMVALGR 86
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
+L + L+G VG++FT +EV + S K AR G A V +
Sbjct: 87 EPSSEYRENLHQVSKHLRGEVGLLFTNRTKEEVDEWFSSFKEVDFARAGNKATYTVSLDT 146
Query: 129 GNTGLDP-SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
G P S + L +PT + KG V +++ E+ K+GD + + E A + KL
Sbjct: 147 GPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD-ILTPEQARVLKL 199
>MGI|MGI:1917152 [details] [associations]
symbol:Mrto4 "MRT4, mRNA turnover 4, homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 MGI:MGI:1917152 GO:GO:0005730 GO:GO:0031965
GO:GO:0042254 CTD:51154 eggNOG:COG0244 GeneTree:ENSGT00390000006238
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AK011387 EMBL:BC005734 IPI:IPI00132578
RefSeq:NP_076025.1 UniGene:Mm.27871 UniGene:Mm.296860
UniGene:Mm.441201 ProteinModelPortal:Q9D0I8 SMR:Q9D0I8
STRING:Q9D0I8 PhosphoSite:Q9D0I8 PaxDb:Q9D0I8 PRIDE:Q9D0I8
Ensembl:ENSMUST00000102503 GeneID:69902 KEGG:mmu:69902
InParanoid:Q9D0I8 NextBio:330573 Bgee:Q9D0I8 CleanEx:MM_MRTO4
Genevestigator:Q9D0I8 GermOnline:ENSMUSG00000028741 Uniprot:Q9D0I8
Length = 239
Score = 162 (62.1 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 45/181 (24%), Positives = 90/181 (49%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L K ++ Y + I + N+ +++L+ IR + HS + GKN +M ++ +
Sbjct: 30 LRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYKDN 88
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-S 136
L + L+G VG++FT +EV++ +K+ AR G A + V + PG P S
Sbjct: 89 LHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHS 148
Query: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
+ L +PT + KG V +++ E+ K+GD + ++ +L + + +I+ ++
Sbjct: 149 MEPQLRQLGLPTALKKGVVTLLSDYEVCKEGDVLTPEQARILKLFGYEMAEFKVIIKYMW 208
Query: 197 E 197
+
Sbjct: 209 D 209
>UNIPROTKB|F1SUQ2 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0005730 GO:GO:0031965 GO:GO:0042254
GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238 KO:K14815
OMA:AWKHSRF EMBL:FP236131 RefSeq:NP_001230644.1 UniGene:Ssc.6624
Ensembl:ENSSSCT00000003877 GeneID:100511136 KEGG:ssc:100511136
Uniprot:F1SUQ2
Length = 241
Score = 158 (60.7 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 52/167 (31%), Positives = 87/167 (52%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI-RLHAERTGNR 76
L K ++ Y + I + N+ +++L+ IR + HS + GKN +M ++ R E R
Sbjct: 30 LRKCVDTYKFLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPCEEY--R 86
Query: 77 DLLNLIPL-LQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP 135
D L+ + L+G VG++FT +EV++ +K+ AR G A V + PG P
Sbjct: 87 DNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKYGEMDYARAGNKATFTVNLDPGPLEQFP 146
Query: 136 -SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
S + L +PT + KG V +++ E+ K+GD V + E A + KL
Sbjct: 147 HSMEPQLRQLGLPTTLKKGVVTLLSDYEVCKEGD-VLTPEQARILKL 192
>UNIPROTKB|A4FV84 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730
GO:GO:0031965 GO:GO:0042254 EMBL:BC123852 IPI:IPI00718277
RefSeq:NP_001076868.1 UniGene:Bt.22192 STRING:A4FV84 PRIDE:A4FV84
Ensembl:ENSBTAT00000015861 GeneID:509932 KEGG:bta:509932 CTD:51154
eggNOG:COG0244 GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263
HOVERGEN:HBG052510 InParanoid:A4FV84 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 NextBio:20869201 Uniprot:A4FV84
Length = 239
Score = 157 (60.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 48/165 (29%), Positives = 82/165 (49%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L K ++ Y + I + N+ +++L+ IR + HS + GKN +M ++ +
Sbjct: 30 LRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYKDN 88
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-S 136
L + L+G VG++FT +EV + +K+ AR G A V + PG P S
Sbjct: 89 LHQVSKKLRGEVGLLFTNRTKEEVDEWFTKYTEMDYARAGNKATFTVNLDPGPLEQFPHS 148
Query: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
+ L +PT + KG V +++ E+ K+GD V + E A + KL
Sbjct: 149 MEPQLRQLGLPTALKKGVVTLLSDYEVCKEGD-VLTPEQARVLKL 192
>UNIPROTKB|Q9UKD2 [details] [associations]
symbol:MRTO4 "mRNA turnover protein 4 homolog" species:9606
"Homo sapiens" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0005730 EMBL:CH471134
GO:GO:0031965 GO:GO:0042254 EMBL:AL035413 CTD:51154 eggNOG:COG0244
HOGENOM:HOG000177263 HOVERGEN:HBG052510 KO:K14815 OMA:AWKHSRF
OrthoDB:EOG41C6X4 EMBL:AF173378 EMBL:AY303790 EMBL:AK024227
EMBL:AK027569 EMBL:BC003013 EMBL:BC006504 IPI:IPI00106491
RefSeq:NP_057267.2 UniGene:Hs.463797 ProteinModelPortal:Q9UKD2
SMR:Q9UKD2 IntAct:Q9UKD2 STRING:Q9UKD2 PhosphoSite:Q9UKD2
DMDM:51316541 SWISS-2DPAGE:Q9UKD2 PaxDb:Q9UKD2 PeptideAtlas:Q9UKD2
PRIDE:Q9UKD2 DNASU:51154 Ensembl:ENST00000330263 GeneID:51154
KEGG:hsa:51154 UCSC:uc001bbs.3 GeneCards:GC01P019578
HGNC:HGNC:18477 HPA:HPA026438 HPA:HPA026446 neXtProt:NX_Q9UKD2
PharmGKB:PA162396216 InParanoid:Q9UKD2 PhylomeDB:Q9UKD2
ChiTaRS:MRTO4 GenomeRNAi:51154 NextBio:54049 Bgee:Q9UKD2
CleanEx:HS_MRTO4 Genevestigator:Q9UKD2 GermOnline:ENSG00000053372
Uniprot:Q9UKD2
Length = 239
Score = 156 (60.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 47/165 (28%), Positives = 83/165 (50%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L K ++ Y + I + N+ +++L+ IR + HS + GKN +M ++ +
Sbjct: 30 LRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYKDN 88
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-S 136
L + L+G VG++FT +EV++ +K+ AR G A V + PG P S
Sbjct: 89 LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDYARAGNKAAFTVSLDPGPLEQFPHS 148
Query: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
+ L +PT + +G V +++ E+ K+GD V + E A + KL
Sbjct: 149 MEPQLRQLGLPTALKRGVVTLLSDYEVCKEGD-VLTPEQARVLKL 192
>RGD|1311709 [details] [associations]
symbol:Mrto4 "mRNA turnover 4 homolog (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0005840 "ribosome"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 RGD:1311709 GO:GO:0042254
GO:GO:0005840 GeneTree:ENSGT00390000006238 IPI:IPI00365290
Ensembl:ENSRNOT00000024326 UCSC:RGD:1311709 Uniprot:F1LTU4
Length = 203
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 45/155 (29%), Positives = 79/155 (50%)
Query: 28 ILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQG 87
+ I + N+ +++L+ IR + HS + GKN +M ++ +L + L+G
Sbjct: 3 LFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPSDEYKDNLHQVSKKLRG 61
Query: 88 NVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-SQTSFFQVLNI 146
VG++FT +EV++ +K+ AR G A + V + PG P S + L +
Sbjct: 62 EVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGL 121
Query: 147 PTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
PT + KG V +++ E+ K+GD V + E A + KL
Sbjct: 122 PTALKKGVVTLLSDYEVCKEGD-VLTPEQARVLKL 155
>UNIPROTKB|E2RG17 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 CTD:51154 GeneTree:ENSGT00390000006238
KO:K14815 OMA:AWKHSRF EMBL:AAEX03001814 RefSeq:XP_544532.2
Ensembl:ENSCAFT00000024114 GeneID:487406 KEGG:cfa:487406
NextBio:20861004 Uniprot:E2RG17
Length = 240
Score = 155 (59.6 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 49/166 (29%), Positives = 87/166 (52%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI-RLHAERTGNR 76
L K ++ Y + I + N+ +++L+ IR + HS + GKN +M ++ R A+ +
Sbjct: 30 LRKCVDTYKYLFIFSVANMRNSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPADEYKD- 87
Query: 77 DLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP- 135
+L + L+G VG++FT +EV++ +K+ AR G A V + PG P
Sbjct: 88 NLHQVSKKLKGEVGLLFTNRTKEEVNEWFTKYTEMDFARAGNKATFTVTLDPGPLEQFPH 147
Query: 136 SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
S + L +PT + +G V +++ E+ K+GD V + E A + KL
Sbjct: 148 SMEPQLRQLGLPTALKRGVVTLLSDHEVCKEGD-VLTPEQARVLKL 192
>TAIR|locus:2032970 [details] [associations]
symbol:AT1G25260 "AT1G25260" species:3702 "Arabidopsis
thaliana" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005840 "ribosome" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] InterPro:IPR001790 Pfam:PF00466
EMBL:CP002684 GO:GO:0042254 GO:GO:0022626 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF EMBL:AY045969 EMBL:AY079322 EMBL:AY088374
IPI:IPI00529475 RefSeq:NP_564226.1 UniGene:At.21571
ProteinModelPortal:Q94AK8 IntAct:Q94AK8 STRING:Q94AK8 PRIDE:Q94AK8
EnsemblPlants:AT1G25260.1 GeneID:839109 KEGG:ath:AT1G25260
TAIR:At1g25260 InParanoid:Q94AK8 PhylomeDB:Q94AK8
ProtClustDB:CLSN2687949 ArrayExpress:Q94AK8 Genevestigator:Q94AK8
Uniprot:Q94AK8
Length = 235
Score = 148 (57.2 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 49/228 (21%), Positives = 108/228 (47%)
Query: 5 LSKAEKKIAYDARLC------KLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGK 58
LSK +KK + + C + +E+YS + + + +N+ + + + R R + +G
Sbjct: 12 LSKTKKK-GREHKECIVNGIREAVEKYSSVYVFSFENMRNIKFKEFRQQFRHNGKFFLGS 70
Query: 59 NTMMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGL 118
N +M+ ++ AE + + LL+G+ G++ T +EV + ++ + +R G
Sbjct: 71 NKVMQVALGRSAEDELRSGIYKVSKLLRGDTGLLVTDMPKEEVESLFNAYEDSDFSRTGS 130
Query: 119 VAPIDVVVPPGNTG-LDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESAL 177
+A V + G + L +P ++NKGTVE++ + ++G ++ + +
Sbjct: 131 IAVETVELKEGPLEQFTHEMEPLLRKLEMPVRLNKGTVELVADFVVCEEGKQLSPKSAHI 190
Query: 178 LSKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRV 225
L L +K ++ L ++ + SP +L +D++ + E +S V
Sbjct: 191 LRLLRMKMATFKLNLLCRW------SPSDFELYREDLSELYREDLSDV 232
>UNIPROTKB|G4MVM1 [details] [associations]
symbol:MGG_08908 "mRNA turnover protein 4" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254
GO:GO:0005840 EMBL:CM001232 KO:K14815 RefSeq:XP_003713937.1
EnsemblFungi:MGG_08908T0 GeneID:2679894 KEGG:mgr:MGG_08908
Uniprot:G4MVM1
Length = 251
Score = 145 (56.1 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 46/164 (28%), Positives = 77/164 (46%)
Query: 6 SKAEKKIAY-DARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKR 64
++ +K++ + + R C + +Y + + + DN+ +N L+ +R L S + GK +M R
Sbjct: 19 TREQKELLFTNIREC--VPQYQHLFVFSVDNMRNNNLKDVRRELSGDSRMFFGKTKLMAR 76
Query: 65 SIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDV 124
++ AE L L L G VG+IFT E+ + AR G VAP D
Sbjct: 77 ALGQTAEDEQAEGLHKLTSHLAGTVGLIFTNRPASELLSYLDSITSVDFARAGAVAPRDF 136
Query: 125 VVPPG---NTGLD-PSQTSF---------FQVLNIPTKINKGTV 155
+PPG +TG + P + + L +PT++ KG V
Sbjct: 137 SIPPGVVYSTGGEVPQEYDVPLAHSIEPELRKLGVPTRLIKGRV 180
>SGD|S000001492 [details] [associations]
symbol:MRT4 "Protein involved in mRNA turnover and ribosome
assembly" species:4932 "Saccharomyces cerevisiae" [GO:0042273
"ribosomal large subunit biogenesis" evidence=IMP;IPI] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=IMP] [GO:0070180 "LSU rRNA binding"
evidence=ISA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005622 "intracellular" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 SGD:S000001492 GO:GO:0005654 GO:GO:0005730
EMBL:BK006944 GO:GO:0030687 GO:GO:0000956 EMBL:S53418 GO:GO:0006364
GO:GO:0000027 EMBL:X61398 EMBL:S59773 eggNOG:COG0244
GeneTree:ENSGT00390000006238 HOGENOM:HOG000177263 KO:K14815
OMA:AWKHSRF OrthoDB:EOG4KH643 EMBL:Z28009 PIR:S30013
RefSeq:NP_012916.1 ProteinModelPortal:P33201 SMR:P33201
DIP:DIP-5283N IntAct:P33201 MINT:MINT-573561 STRING:P33201
PaxDb:P33201 PeptideAtlas:P33201 EnsemblFungi:YKL009W GeneID:853860
KEGG:sce:YKL009W CYGD:YKL009w NextBio:975109 Genevestigator:P33201
GermOnline:YKL009W GO:GO:0070180 Uniprot:P33201
Length = 236
Score = 140 (54.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 45/208 (21%), Positives = 92/208 (44%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
+ K+ +D + + L+ Y + ++ D+V + LQ IR ++ MGK ++++++
Sbjct: 20 RENKERIFD-EVREALDTYRYVWVLHLDDVRTPVLQEIRTSWAGSKLI-MGKRKVLQKAL 77
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
E +L L L G G++FT D+ V + + + +R AP+ +
Sbjct: 78 GEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSYVRSDYSRPNTKAPLTFTI 137
Query: 127 PPG----NTGLDPSQTSFFQV----------LNIPTKINKGTVEIITPVELIKKGDRVGS 172
P G G P++ + IPTKI G + I +P + +G+++
Sbjct: 138 PEGIVYSRGGQIPAEEDVPMIHSLEPTMRNKFEIPTKIKAGKITIDSPYLVCTEGEKLDV 197
Query: 173 SESALLSKLAIKPFSYGLIVMSVYENGS 200
++ +L + I + + V + Y+N S
Sbjct: 198 RQALILKQFGIAASEFKVKVSAYYDNDS 225
>UNIPROTKB|J9NSQ8 [details] [associations]
symbol:MRTO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 GeneTree:ENSGT00390000006238
EMBL:AAEX03001814 Ensembl:ENSCAFT00000047569 Uniprot:J9NSQ8
Length = 193
Score = 133 (51.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 38 SNQLQHIRAGLRDHSIVLMGKNTMMKRSI-RLHAERTGNRDLLNLIPLLQGNVGMIFTKG 96
+++L+ IR + HS + GKN +M ++ R A+ + +L + L+G VG++FT
Sbjct: 3 NSKLKDIRNAWK-HSRMFFGKNKVMMVALGRSPADEYKD-NLHQVSKKLKGEVGLLFTNR 60
Query: 97 DLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP-SQTSFFQVLNIPTKINKGTV 155
+EV++ +K+ AR G A V + PG P S + L +PT + +G V
Sbjct: 61 TKEEVNEWFTKYTEMDFARAGNKATFTVTLDPGPLEQFPHSMEPQLRQLGLPTALKRGVV 120
Query: 156 EIITPVELIKKGDRVGSSESALLSKL 181
+++ E+ K+GD V + E A + KL
Sbjct: 121 TLLSDHEVCKEGD-VLTPEQARVLKL 145
>ASPGD|ASPL0000002010 [details] [associations]
symbol:AN6902 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005654
"nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=IEA]
InterPro:IPR001790 Pfam:PF00466 GO:GO:0042254 GO:GO:0005840
EMBL:BN001301 EMBL:AACD01000113 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF OrthoDB:EOG4KH643 RefSeq:XP_664506.1
STRING:Q5AXS8 EnsemblFungi:CADANIAT00007704 GeneID:2870607
KEGG:ani:AN6902.2 Uniprot:Q5AXS8
Length = 246
Score = 139 (54.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 60/233 (25%), Positives = 102/233 (43%)
Query: 2 ATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTM 61
A + K + + Y A + + +E+Y + + + DN+ + L+ +R D S + GK +
Sbjct: 16 AKKSHKEQTRRLY-ANIRECVEKYDHLFVFSVDNMRNTYLKDVRTEFAD-SRLFFGKTKV 73
Query: 62 MKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAP 121
M ++ + E +L L P L G VG++FT D V+D + AR G A
Sbjct: 74 MAVALGHNPETEAAENLHLLTPYLTGAVGLLFTSRDPASVTDYFDAFRPLDFARAGTEAT 133
Query: 122 IDVVVPPG----NTGLDP-------SQT--SFFQVLNIPTKINKGTV--EIITPVE---L 163
+P G G P S T + L +PT++ KG V E+ E +
Sbjct: 134 RSFSIPAGLVYSRAGEIPTSEDEPVSHTIEPELRKLGVPTRLVKGKVMLELTDGQEGYPV 193
Query: 164 IKKGDRVGSSESALLSKLAIKP--FSYGLIVMSVYENGSVYSPEVLDLTEDDI 214
KKG+ + S ++ LL ++ F GL G V E+L+ E+++
Sbjct: 194 CKKGEILDSRQTTLLKMFGVQTSEFRVGLKAHWARATGKV---EILEKNENEM 243
>POMBASE|SPBC11G11.03 [details] [associations]
symbol:mrt4 "mRNA turnover and ribosome assembly
protein Mrt4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000027 "ribosomal large subunit assembly" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006364
"rRNA processing" evidence=ISO] [GO:0006402 "mRNA catabolic
process" evidence=ISO] InterPro:IPR001790 Pfam:PF00466
PomBase:SPBC11G11.03 GO:GO:0005730 EMBL:CU329671 GO:GO:0006402
GO:GO:0006364 GO:GO:0000027 eggNOG:COG0244 HOGENOM:HOG000177263
KO:K14815 OMA:AWKHSRF PIR:T39330 RefSeq:NP_595721.1 STRING:Q9USZ6
EnsemblFungi:SPBC11G11.03.1 GeneID:2539913 KEGG:spo:SPBC11G11.03
OrthoDB:EOG4KH643 NextBio:20801056 Uniprot:Q9USZ6
Length = 241
Score = 130 (50.8 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 52/198 (26%), Positives = 83/198 (41%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
E K A + + + L+ + + I N+ + L+ IR + S + MGK +M +++
Sbjct: 21 EGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDWKG-SRIFMGKTKVMAKALGH 79
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
E ++ L LL G VG++FT EV AR G VAP V+P
Sbjct: 80 TPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESFVQNDFARAGAVAPFTHVIPA 139
Query: 129 G----NTGLDPSQTSFF-------QV--LNIPTKINKGTVEIITPVELIKKGDRVGSSES 175
G G P + QV L +PT + G V ++ L +G ++ S ++
Sbjct: 140 GPVYSRAGQIPVEDDILLTHTLEPQVRQLGMPTVLKNGVVTLLADFPLCTEGQQLDSRQT 199
Query: 176 ALLSKLAIKP--FSYGLI 191
LL I F GL+
Sbjct: 200 RLLKLFGITAAEFKVGLL 217
>DICTYBASE|DDB_G0276411 [details] [associations]
symbol:mrt4 "mRNA turnover protein 4" species:44689
"Dictyostelium discoideum" [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001790
Pfam:PF00466 dictyBase:DDB_G0276411 GO:GO:0005730
GenomeReviews:CM000151_GR GO:GO:0042254 EMBL:AAFI02000015
eggNOG:COG0244 KO:K14815 OMA:AWKHSRF RefSeq:XP_643104.1
STRING:Q86HD3 PRIDE:Q86HD3 EnsemblProtists:DDB0252706
GeneID:8620508 KEGG:ddi:DDB_G0276411 ProtClustDB:CLSZ2430892
Uniprot:Q86HD3
Length = 223
Score = 123 (48.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/179 (22%), Positives = 80/179 (44%)
Query: 3 TRLSK--AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
T+++K EKK + + ++++Y I + +N+ +N+L+ +R S L GKN
Sbjct: 13 TKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEWST-SKFLFGKNK 71
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
++ + E +L L L+G G+ FT +V + + + R G V+
Sbjct: 72 VLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNYSEKDFPRSGFVS 131
Query: 121 PIDVVVPPGN-TGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALL 178
+ + G G+ S ++ + L +PT + G + + L + G V +S LL
Sbjct: 132 EETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAGVAVTPEQSQLL 190
>UNIPROTKB|E2QYG0 [details] [associations]
symbol:E2QYG0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005840 "ribosome" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
GO:GO:0042254 GO:GO:0005840 GeneTree:ENSGT00390000006238
EMBL:AAEX03008678 Ensembl:ENSCAFT00000000827 OMA:FRSSEYS
Uniprot:E2QYG0
Length = 233
Score = 121 (47.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/153 (26%), Positives = 76/153 (49%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI-RLHAERTGNR 76
L K ++ Y + I + N+ +++L+ IR + HS V GKN +M ++ R A+ +
Sbjct: 30 LRKCVDTYKYLFIFSVANMRNSELKDIRNPWK-HSRVFFGKNKVMMVALGRSPADEYKD- 87
Query: 77 DLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP- 135
+L + L+G VG++FT +E ++ +K+ A G A V + PG P
Sbjct: 88 NLHQVSKKLKGEVGLLFTNRTKEEANEWFTKYTEMDFAPAGNRATFTVTLHPGPLEQFPH 147
Query: 136 SQTSFFQVLNIPTKINKGTVEIITPVELIKKGD 168
S + L +PT + +G V + + ++ K+ +
Sbjct: 148 SMEPQLRQLGLPTALKRGVVTLPSDHQVCKRAE 180
>UNIPROTKB|F1M970 [details] [associations]
symbol:F1M970 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005840 "ribosome" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001790
Pfam:PF00466 GO:GO:0042254 GO:GO:0005840
GeneTree:ENSGT00390000006238 IPI:IPI00779080
Ensembl:ENSRNOT00000055679 Uniprot:F1M970
Length = 232
Score = 118 (46.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 47/167 (28%), Positives = 82/167 (49%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L K ++ Y + I + N+ +++L+ IR + HS G +M R ++ +D
Sbjct: 29 LWKCVDTYKYLFIFSMANMRNSKLKDIRNAWK-HSRKFFGNKVIMVALGRSPSDEY--KD 85
Query: 78 LLNLI-PLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVG-LVAPIDVVVPPGNTGLDP 135
L+ + L+G VG++FT +EV++ +K+ AR G V+P PG P
Sbjct: 86 NLHQVHKKLRGEVGLLFTNRRKEEVNEWFTKYTEMDFARGGNKVSP-----DPGPLKQFP 140
Query: 136 -SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKL 181
S + L +PT + G V +++ E+ K+GD V + E A + KL
Sbjct: 141 HSMEPQLRQLGLPTALKNGVVTLLSDYEVCKEGD-VLTPEQARVLKL 186
>CGD|CAL0006176 [details] [associations]
symbol:MRT4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0030687 "preribosome,
large subunit precursor" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=IEA] InterPro:IPR001790 Pfam:PF00466
CGD:CAL0006176 GO:GO:0042254 GO:GO:0005840 GO:GO:0035690
EMBL:AACQ01000034 EMBL:AACQ01000033 eggNOG:COG0244
HOGENOM:HOG000177263 KO:K14815 RefSeq:XP_719113.1
RefSeq:XP_719230.1 STRING:Q5AC00 GeneID:3639102 GeneID:3639219
KEGG:cal:CaO19.12996 KEGG:cal:CaO19.5550 Uniprot:Q5AC00
Length = 230
Score = 117 (46.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
K K +D + L+ + I ++ D++ + LQ +R ++L GK ++++++
Sbjct: 20 KENKTRLFD-EVRSALDTFKYIWVLQFDDIRTPVLQDVRNDWVGSKLIL-GKRKVLQKAL 77
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
E +L L L +G G++FT + V + +R APID +
Sbjct: 78 GETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYSKQDYSRAKSRAPIDFTI 137
Query: 127 PPG---NTG----LD---PSQTSFFQVLN----IPTKINKGTVEIITPVELIKKGDRVGS 172
P G + G ++ P S + L +PTKI G + + P + KGD + +
Sbjct: 138 PAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKIILEEPYVVCNKGDVLDT 197
Query: 173 SESALLSKLAIKPFSYGLIVMSVYENGSVY 202
++ LL + + + + ++ Y+ G V+
Sbjct: 198 RQALLLKQFGVAASEFKIPILGYYD-GEVH 226
>UNIPROTKB|Q5AC00 [details] [associations]
symbol:MRT4 "Potential rRNA processing factor"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0035690 "cellular response to
drug" evidence=IMP] InterPro:IPR001790 Pfam:PF00466 CGD:CAL0006176
GO:GO:0042254 GO:GO:0005840 GO:GO:0035690 EMBL:AACQ01000034
EMBL:AACQ01000033 eggNOG:COG0244 HOGENOM:HOG000177263 KO:K14815
RefSeq:XP_719113.1 RefSeq:XP_719230.1 STRING:Q5AC00 GeneID:3639102
GeneID:3639219 KEGG:cal:CaO19.12996 KEGG:cal:CaO19.5550
Uniprot:Q5AC00
Length = 230
Score = 117 (46.2 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
K K +D + L+ + I ++ D++ + LQ +R ++L GK ++++++
Sbjct: 20 KENKTRLFD-EVRSALDTFKYIWVLQFDDIRTPVLQDVRNDWVGSKLIL-GKRKVLQKAL 77
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
E +L L L +G G++FT + V + +R APID +
Sbjct: 78 GETIEEEYKDNLHQLSKLCEGLPGLLFTDESPETVEAYFKAYSKQDYSRAKSRAPIDFTI 137
Query: 127 PPG---NTG----LD---PSQTSFFQVLN----IPTKINKGTVEIITPVELIKKGDRVGS 172
P G + G ++ P S + L +PTKI G + + P + KGD + +
Sbjct: 138 PAGIVYSRGGQISIEEDVPMSHSLEETLRNKLKVPTKIKAGKIILEEPYVVCNKGDVLDT 197
Query: 173 SESALLSKLAIKPFSYGLIVMSVYENGSVY 202
++ LL + + + + ++ Y+ G V+
Sbjct: 198 RQALLLKQFGVAASEFKIPILGYYD-GEVH 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 318 289 0.00088 115 3 11 22 0.39 34
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 566 (60 KB)
Total size of DFA: 161 KB (2097 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.85u 0.12s 22.97t Elapsed: 00:00:01
Total cpu time: 22.86u 0.12s 22.98t Elapsed: 00:00:01
Start: Sat May 11 06:55:50 2013 End: Sat May 11 06:55:51 2013