BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036252
(318 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50346|RLA0_SOYBN 60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1
Length = 320
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/320 (78%), Positives = 284/320 (88%), Gaps = 2/320 (0%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKIAYDA+LC L+EEY QIL+V +DNVGSNQLQ+IR GLR S+VLMGKNT
Sbjct: 1 MAPKQTKAEKKIAYDAKLCDLMEEYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
MMKRS+R+HAE+TGN LNLIPLL GNVG+IFTKGDLKEVS+EV+K+KV APARVGLVA
Sbjct: 61 MMKRSVRMHAEKTGNNAYLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELI+KGD+VGSSE+ALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL+V+SVY+NGSV+SPEVLDLTEDD+ KF VS V SL+L+I YPT+AAA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF--AAAAAPAAAARAAPVAAAKE 298
PH F+N YKNVL+ AV T+YSF +ADKVKEYLKDPSKF AA AAPAAA+ A AA +E
Sbjct: 241 PHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEE 300
Query: 299 EKKEEPAEESDDDMGLSLFD 318
EKKEEPAEESDDDMG SLFD
Sbjct: 301 EKKEEPAEESDDDMGFSLFD 320
>sp|O04204|RLA01_ARATH 60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A
PE=1 SV=1
Length = 317
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/318 (72%), Positives = 271/318 (85%), Gaps = 3/318 (0%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKI YD++LC+LL EYSQIL+VAADNVGS QLQ+IR GLR S+VLMGKNT
Sbjct: 1 MAVKATKAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
MMKRS+R+HA++TGN+ L+L+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVA
Sbjct: 61 MMKRSVRIHADKTGNQAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
PIDVVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGD+VGSSE+ALL+K
Sbjct: 121 PIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL+V SVY+NGSV++PEVL+LTEDD+ KF VS + +L+L+I YPT+AAA
Sbjct: 181 LGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFA-AAAAPAAAARAAPVAAAKEE 299
PH F+N YKNVL+ A+ATEYSF QA+ VKE+LKDP+KFA A AAP + A
Sbjct: 241 PHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKFAVAVAAPVSGESGG--AVVAVA 298
Query: 300 KKEEPAEESDDDMGLSLF 317
+EE AEESD DMG LF
Sbjct: 299 VEEEAAEESDGDMGFDLF 316
>sp|Q42112|RLA02_ARATH 60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B
PE=1 SV=2
Length = 320
Score = 457 bits (1175), Expect = e-128, Method: Compositional matrix adjust.
Identities = 213/275 (77%), Positives = 248/275 (90%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+ +KAEKKIAYD +LC+L++EY+QIL+VAADNVGS QLQ+IR GLR S+VLMGKNTMMK
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
RS+R+H+E TGN +LNL+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVAPID
Sbjct: 63 RSVRIHSENTGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
VVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GD+VGSSE+ALL+KL I
Sbjct: 123 VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
+PFSYGL+V SVY+NGSV+SPEVLDLTED + KF +S V SLAL++ YPT+AAAPH
Sbjct: 183 RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
FIN YKN L+ AVATEY+F QA+KVKEYLKDPSKF
Sbjct: 243 FINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277
>sp|P57691|RLA03_ARATH 60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C
PE=1 SV=1
Length = 323
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 210/275 (76%), Positives = 248/275 (90%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+ +KAEKKIAYD +LC+L++EY+QIL+VAADNVGS QLQ+IR GLR S+VLMGKNTMMK
Sbjct: 3 KATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMK 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
RS+R+H+E +GN +LNL+PLLQGNVG+IFTKGDLKEVS+EV+K+KV APARVGLVAPID
Sbjct: 63 RSVRIHSENSGNTAILNLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPID 122
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
VVV PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIK+GD+VGSSE+ALL+KL I
Sbjct: 123 VVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGI 182
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
+PFSYGL+V SVY+NGSV+SPEVLDLTED + KF +S V SLAL++ YPT+AAAPH
Sbjct: 183 RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
FIN YKN L+ AVAT+Y+F QA+KVKE+LKDPSKF
Sbjct: 243 FINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
>sp|P41095|RLA0_ORYSJ 60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica
GN=Os08g0130500 PE=1 SV=3
Length = 319
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/319 (73%), Positives = 279/319 (87%), Gaps = 1/319 (0%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKK+AYD +LC+LL+EY+++LI ADNVGSNQLQ IR GLR SIVLMGKNT
Sbjct: 1 MAIKRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
+++R I++HA+ TGN++ L L+PLL GNVG+IFTKGDLKEV +EV+K+KV APARVGLVA
Sbjct: 61 LIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
P+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGD+VGSSESALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL++ +VY++GSV+SPEVLDLTEDD+ KF VS VAS++L+I YPTIAAA
Sbjct: 181 LGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAA-AARAAPVAAAKEE 299
PH F+NGYKNVL+ AV TEYS+ ADK+KEYLKDPSKFA AA AA + AAP AA +EE
Sbjct: 241 PHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEE 300
Query: 300 KKEEPAEESDDDMGLSLFD 318
KKEEP EESD D+G+SLFD
Sbjct: 301 KKEEPEEESDGDLGMSLFD 319
>sp|P50345|RLA0_LUPLU 60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1
Length = 322
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 239/321 (74%), Positives = 273/321 (85%), Gaps = 3/321 (0%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKI YD +LC+LL+EY+QIL+V ADNVGS QLQ+IR GLR S+VLMGKNT
Sbjct: 1 MAPKATKAEKKIVYDGKLCQLLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
MMKRS+R+HAE+TGN+ LNLIPLL GNVG+IFTKG LKEVS+EV+K+KV APA VGLVA
Sbjct: 61 MMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGYLKEVSEEVAKYKVGAPACVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGD+VGSSE+ALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL+V+SVY+NGSV+ PEVLDLTEDD+ KF VS+ S P +AA
Sbjct: 181 LGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDP---SKFAAAAAPAAAARAAPVAAAK 297
PH FIN YKNVL+ AVATEYSF QAD+VKEYLKDP + AAAAAPAA + AAP AAAK
Sbjct: 241 PHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAK 300
Query: 298 EEKKEEPAEESDDDMGLSLFD 318
EK+EEPAEESDD+MG LFD
Sbjct: 301 AEKEEEPAEESDDEMGFGLFD 321
>sp|O24573|RLA0_MAIZE 60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3
Length = 319
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/318 (71%), Positives = 266/318 (83%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKIAYD +LC LL+EY+++LI ADNVGS QLQ IR GLR S+VLMGKNT
Sbjct: 1 MAIKRTKAEKKIAYDKKLCSLLDEYTKVLIALADNVGSKQLQDIRRGLRGDSVVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
+++R I+++AE+TGN L+ LL GNVG+IFTKGDLKEV +EV+K+KV APARVGLVA
Sbjct: 61 LIRRCIKVYAEKTGNHTFDPLMDLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
P+DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKG++VGSSESALL+K
Sbjct: 121 PVDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL V SVYE+GSV+SPEVLDL+E+D+ KF VS VASL+L+I YPT+AA
Sbjct: 181 LGIRPFSYGLQVTSVYEDGSVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISYPTLAAV 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEK 300
PH FINGYKNVL+ AV T+YS+ ADK+KEYLKDPSKFA AA AA A A +EEK
Sbjct: 241 PHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDPSKFAVAAPVAAGDSGASAAPKEEEK 300
Query: 301 KEEPAEESDDDMGLSLFD 318
EP EESD++MG SLFD
Sbjct: 301 AAEPEEESDEEMGFSLFD 318
>sp|P29764|RLA0_CHERU 60S acidic ribosomal protein P0 OS=Chenopodium rubrum PE=2 SV=1
Length = 321
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/324 (64%), Positives = 245/324 (75%), Gaps = 10/324 (3%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
MA + +KAEKKIAYD +LC+LL+EYSQ+LI +ADNVGSNQLQ IR GLR SIVLMGKNT
Sbjct: 1 MAVKPTKAEKKIAYDQKLCQLLDEYSQVLIASADNVGSNQLQAIRIGLRGDSIVLMGKNT 60
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
MMKRSIRLHAE TGN +L N+ L NVG+IFTKGDL +V +E+SK+KV APAR GLVA
Sbjct: 61 MMKRSIRLHAENTGNENLRNVEQLFLPNVGLIFTKGDLNQVREEISKYKVGAPARFGLVA 120
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIIT VELIKKG++VGSSE+ALL+K
Sbjct: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITAVELIKKGEKVGSSEAALLAK 180
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L I+PFSYGL V SVY++GSV+SPEVLDLTEDD+ +F VS V SL+L+I YPT+AAA
Sbjct: 181 LGIRPFSYGLNVESVYDDGSVFSPEVLDLTEDDLLARFATGVSMVTSLSLAISYPTLAAA 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAK--- 297
PH G L + + + K L+ S+ A A+ + ++
Sbjct: 241 PHSSSMGATMFLLLLLQPTMTSLRPRK----LRSISRILAVASCSCSSAGTAPTGGGAAA 296
Query: 298 ---EEKKEEPAEESDDDMGLSLFD 318
EEKKEEP EESDDD+G SLFD
Sbjct: 297 AAVEEKKEEPEEESDDDIGFSLFD 320
>sp|Q9DG68|RLA0_RANSY 60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2
SV=1
Length = 315
Score = 313 bits (801), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/315 (54%), Positives = 223/315 (70%), Gaps = 2/315 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL EV D + +KV A AR G +AP D
Sbjct: 63 KAIRGHLEN--NSALEKLLPHIKGNVGFVFTKEDLAEVRDMLLANKVPASARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ VY+NGS+YSPEVLD+TED + +FLE V +AS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEE 303
+NGYK VL+ AV T+YSF ADKVK +L DPS F AA A A A +AA ++++E
Sbjct: 241 VVNGYKRVLALAVETDYSFPLADKVKAFLADPSAFVVAAPVAETAAAPAASAAPAKEEKE 300
Query: 304 PAEESDDDMGLSLFD 318
+EESDDDMG LFD
Sbjct: 301 ESEESDDDMGFGLFD 315
>sp|Q9U3U0|RLA0_CERCA 60S acidic ribosomal protein P0 OS=Ceratitis capitata GN=RpLP0 PE=3
SV=1
Length = 317
Score = 310 bits (794), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 166/317 (52%), Positives = 223/317 (70%), Gaps = 4/317 (1%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +KA K Y ++ +L +EY + IV ADNVGS Q+Q+IR LR +VLMGKNTMM+
Sbjct: 3 RENKAAWKAQYFLKVVELFDEYPKCFIVGADNVGSKQMQNIRTSLRGLGVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTKGDL EV D++ + KV APAR G +AP+
Sbjct: 63 KAIRGHLEN--NAQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARAGAIAPLP 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GD+VG+SE+ LL+ L I
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGL + VY++GS++SPE+LD+ +D+ KF V+ +A+++L I YPTIA+APH
Sbjct: 181 SPFSYGLAITQVYDSGSIFSPEILDIKPEDLRAKFQAGVANLAAVSLQIGYPTIASAPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFA--AAAAPAAAARAAPVAAAKEEKK 301
NG+KN+L+ A +TE F QA +KE++KDPSKF AAA+ AA A +E KK
Sbjct: 241 IANGFKNLLAIAASTEVEFKQAATIKEFIKDPSKFVAAAAASAPAAGAGAAAEKKEEAKK 300
Query: 302 EEPAEESDDDMGLSLFD 318
EE E DDDMG LFD
Sbjct: 301 EESESEEDDDMGFGLFD 317
>sp|P19889|RLA0_DROME 60S acidic ribosomal protein P0 OS=Drosophila melanogaster GN=RpLP0
PE=1 SV=1
Length = 317
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/275 (53%), Positives = 203/275 (73%), Gaps = 2/275 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +KA K Y ++ +L +E+ + IV ADNVGS Q+Q+IR LR ++VLMGKNTMM+
Sbjct: 3 RENKAAWKAQYFIKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTKGDL EV D++ + KV APAR G +AP+
Sbjct: 63 KAIRGHLEN--NPQLEKLLPHIKGNVGFVFTKGDLAEVRDKLLESKVRAPARPGAIAPLH 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V++P NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GD+VG+SE+ LL+ L I
Sbjct: 121 VIIPAQNTGLGPEKTSFFQALSIPTKISKGTIEIINDVPILKPGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGLIV VY++GS++SPE+LD+ +D+ KF + V+ +A++ LS+ YPTIA+APH
Sbjct: 181 SPFSYGLIVNQVYDSGSIFSPEILDIKPEDLRAKFQQGVANLAAVCLSVGYPTIASAPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
NG+KN+L+ A TE F +A +KEY+KDPSKF
Sbjct: 241 IANGFKNLLAIAATTEVEFKEATTIKEYIKDPSKF 275
>sp|Q90YX1|RLA0_ICTPU 60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0
PE=2 SV=1
Length = 317
Score = 296 bits (758), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/275 (56%), Positives = 197/275 (71%), Gaps = 2/275 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL +Y + IV ADNVGS Q+Q IR LR +IVLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLNDYPKCFIVGADNVGSKQMQTIRLSLRGKAIVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL EV D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLE--NNPALEKLLPHIRGNVGFVFTKEDLPEVRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LI+ GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGLI+ VY+NGSVYSPEVLD+TED + +FLE V +AS+ L I YPT+A+ PH
Sbjct: 181 SPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
INGYK VL AV T+YSF ADKVK +L DPS+F
Sbjct: 241 IINGYKRVLRVAVETDYSFPMADKVKAFLADPSRF 275
>sp|Q9PV90|RLA0_DANRE 60S acidic ribosomal protein P0 OS=Danio rerio GN=rplp0 PE=2 SV=1
Length = 319
Score = 292 bits (747), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/319 (53%), Positives = 224/319 (70%), Gaps = 6/319 (1%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL+++ + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL EV D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALERLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLA- 182
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNM 180
Query: 183 --IKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
I PFSYGLI+ VY+NGSVYSPEVLD+TED + +FL+ V +AS+ L I YPT+A+
Sbjct: 181 LNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASI 240
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAA-RAAPVAAAKEE 299
PH INGYK VL+ V T+Y+F A+KVK YL DP+ FA AA AAA + + AAKEE
Sbjct: 241 PHTIINGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEE 300
Query: 300 KKEEPAEESDDDMGLSLFD 318
+E +EESD+DMG LFD
Sbjct: 301 APKEDSEESDEDMGFGLFD 319
>sp|Q93572|RLA0_CAEEL 60S acidic ribosomal protein P0 OS=Caenorhabditis elegans GN=rpa-0
PE=1 SV=3
Length = 312
Score = 290 bits (743), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 221/315 (70%), Gaps = 5/315 (1%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R ++ K Y +L +L EEY + L+V DNVGS Q+Q IR +R H+ +LMGKNTM++
Sbjct: 3 REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
+++R H + N L L+P + NVG +FTK DL E+ ++ +++ APA+ G +AP D
Sbjct: 63 KALRGHLGK--NPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V +PP NTG+ P +TSFFQ L IPTKI +GT+EI+ V LIK+GD+VG+SESALL+ L +
Sbjct: 121 VKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGV 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFSYGL+V VY++G++Y+PEVLD+T +++ +FL V VAS++L++ YPT+A+ H
Sbjct: 181 TPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEE 303
NG +N+L A T+ SF +A+ +K ++ DPSKFAAAA AAAA AA AAK+E+
Sbjct: 241 LANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKFAAAAPAAAAAPAAAAPAAKKEEP-- 298
Query: 304 PAEESDDDMGLSLFD 318
EESDDDMG LFD
Sbjct: 299 -KEESDDDMGFGLFD 312
>sp|Q29214|RLA0_PIG 60S acidic ribosomal protein P0 OS=Sus scrofa GN=RPLP0 PE=2 SV=2
Length = 318
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 199/275 (72%), Gaps = 2/275 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>sp|P05388|RLA0_HUMAN 60S acidic ribosomal protein P0 OS=Homo sapiens GN=RPLP0 PE=1 SV=1
Length = 317
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 170/317 (53%), Positives = 226/317 (71%), Gaps = 4/317 (1%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKE- 302
INGYK VL+ +V T+Y+F A+KVK +L DPS F AAA AAA AAP AAA K E
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEA 300
Query: 303 -EPAEESDDDMGLSLFD 318
E +EESD+DMG LFD
Sbjct: 301 KEESEESDEDMGFGLFD 317
>sp|Q95140|RLA0_BOVIN 60S acidic ribosomal protein P0 OS=Bos taurus GN=RPLP0 PE=2 SV=3
Length = 318
Score = 290 bits (741), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 145/275 (52%), Positives = 199/275 (72%), Gaps = 2/275 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
INGYK VL+ +V T+Y+F A+KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFLADPSAF 275
>sp|P14869|RLA0_MOUSE 60S acidic ribosomal protein P0 OS=Mus musculus GN=Rplp0 PE=1 SV=3
Length = 317
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 197/275 (71%), Gaps = 2/275 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+Y+PEVLD+TE + ++FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYNPEVLDITEQALHSRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPSKF 278
INGYK VL+ +V TEY+F +KVK +L DPS F
Sbjct: 241 IINGYKRVLALSVETEYTFPLTEKVKAFLADPSAF 275
>sp|P47826|RLA0_CHICK 60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1
Length = 316
Score = 288 bits (737), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 197/273 (72%), Gaps = 2/273 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + +V ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFMKIIQLLDDYPKCFVVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP D
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCD 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD+TE+ + +FLE V VAS+ L I YPTIA+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPS 276
+NGYK VL+ AV T+Y+F A+KVK +L DPS
Sbjct: 241 IVNGYKRVLAVAVETDYTFPLAEKVKAFLADPS 273
>sp|P19945|RLA0_RAT 60S acidic ribosomal protein P0 OS=Rattus norvegicus GN=Rplp0 PE=1
SV=2
Length = 317
Score = 283 bits (724), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/269 (53%), Positives = 194/269 (72%), Gaps = 2/269 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR ++VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P ++GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GLI+ V++NGS+YSPEVLD+TE + T+FLE V VAS+ L I YPT+A+ PH
Sbjct: 181 SPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYL 272
INGYK VL+ +V T+Y+F A+KVK +L
Sbjct: 241 IINGYKRVLALSVETDYTFPLAEKVKAFL 269
>sp|Q8NHW5|RLA0L_HUMAN 60S acidic ribosomal protein P0-like OS=Homo sapiens GN=RPLP0P6
PE=5 SV=1
Length = 317
Score = 280 bits (717), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 142/273 (52%), Positives = 193/273 (70%), Gaps = 2/273 (0%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
R +A K Y ++ +LL++Y + IV ADNVGS Q+Q IR LR +VLMGKNTMM+
Sbjct: 3 REDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTMMR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
++IR H E N L L+P + GNVG +FTK DL E+ D + +KV A AR G +AP +
Sbjct: 63 KAIRGHLEN--NPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V VP NTGL P +TSFFQ L I TKI++GT+EI++ V+LIK GD+VG+SE+ LL+ L I
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PFS+GL++ V++NGS+Y+PEVLD TE+ + ++FLE V VAS+ L YPT+A+ PH
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHS 240
Query: 244 FINGYKNVLSFAVATEYSFSQADKVKEYLKDPS 276
INGYK VL+ +V T+Y+F A+ VK +L DPS
Sbjct: 241 IINGYKRVLALSVETDYTFPLAENVKAFLADPS 273
>sp|O74864|RLA0_SCHPO 60S acidic ribosomal protein P0 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpp0 PE=3 SV=1
Length = 312
Score = 260 bits (664), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 203/310 (65%), Gaps = 3/310 (0%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
E K Y +L L E+Y+ + +V DNV S Q+ +R LR + ++MGKNTM++R++R
Sbjct: 6 ESKAQYFEKLRSLFEKYNSLFVVNIDNVSSQQMHTVRKQLRGTAELIMGKNTMIRRAMR- 64
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
+L L+P+++GNVG +FT DLKEV + + + +AAPAR +AP+DV VP
Sbjct: 65 -GIINDMPELERLLPVVRGNVGFVFTNADLKEVRETIIANVIAAPARPNAIAPLDVFVPA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSY 188
GNTG++P +TSFFQ L IPTKI +GT+EI + V L+ K +VG SE+ LL+ L I PF+Y
Sbjct: 124 GNTGMEPGKTSFFQALGIPTKITRGTIEITSDVHLVSKDAKVGPSEATLLNMLNISPFTY 183
Query: 189 GLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGY 248
G+ V+++Y+ G+V+SPE+LD++E+D+ L A S + +++L YPTI + H +N Y
Sbjct: 184 GMDVLTIYDQGNVFSPEILDVSEEDLIGHLLSAASIITAISLGANYPTILSVMHSVVNAY 243
Query: 249 KNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEES 308
KN+++ ++ATEY+F ++ K +L DPS F AAA AAA A E E EES
Sbjct: 244 KNLVAVSLATEYTFEGTEQTKAFLADPSAFVVAAA-PAAAAGGEAEAPAAEAAAEEEEES 302
Query: 309 DDDMGLSLFD 318
D+DMG LFD
Sbjct: 303 DEDMGFGLFD 312
>sp|Q96TJ5|RLA0_NEUCR 60S acidic ribosomal protein P0 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=crpp0 PE=2 SV=1
Length = 313
Score = 232 bits (591), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 184/269 (68%), Gaps = 2/269 (0%)
Query: 6 SKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRS 65
K+ K Y +L LLE+Y I IV+ DNV S Q+ IR LR ++VLMGKNTM++R+
Sbjct: 3 GKSANKAGYFDKLKGLLEDYRSIFIVSVDNVSSQQMHEIRQSLRGEAVVLMGKNTMVRRA 62
Query: 66 IRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVV 125
++ T + L+P ++GNVG +FT GDLKEV D++ +KVAAPAR G +AP DV
Sbjct: 63 LKTFVADTPEYE--RLLPFVKGNVGFVFTNGDLKEVRDKILANKVAAPARAGAIAPADVW 120
Query: 126 VPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKP 185
+P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L++ G +VG SE+ LL+ L I P
Sbjct: 121 IPAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISP 180
Query: 186 FSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFI 245
F+YG+ + VY+ G+ + +VLD++E+ + F A++ +ASL+L++ +PT+ + H +
Sbjct: 181 FTYGMGIAQVYDQGNTFPSDVLDISEEQLLKAFSTAITTIASLSLALNFPTLPSVIHSVV 240
Query: 246 NGYKNVLSFAVATEYSFSQADKVKEYLKD 274
N YK VL+ A+ TE S+ + +++K+ + +
Sbjct: 241 NAYKKVLAVAIETEISWPEIEELKDRIAN 269
>sp|P05317|RLA0_YEAST 60S acidic ribosomal protein P0 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPP0 PE=1 SV=2
Length = 312
Score = 231 bits (590), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 138/310 (44%), Positives = 211/310 (68%), Gaps = 3/310 (0%)
Query: 9 EKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRL 68
EKK Y A+L + LEEY + +V DNV S Q+ +R LR ++VLMGKNTM++R+IR
Sbjct: 6 EKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGRAVVLMGKNTMVRRAIR- 64
Query: 69 HAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPP 128
+ D L+P ++GNVG +FT L E+ + + ++VAAPAR G VAP D+ V
Sbjct: 65 -GFLSDLPDFEKLLPFVKGNVGFVFTNEPLTEIKNVIVSNRVAAPARAGAVAPEDIWVRA 123
Query: 129 GNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSY 188
NTG++P +TSFFQ L +PTKI +GT+EI++ V+++ G++VG SE++LL+ L I PF++
Sbjct: 124 VNTGMEPGKTSFFQALGVPTKIARGTIEIVSDVKVVDAGNKVGQSEASLLNLLNISPFTF 183
Query: 189 GLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGY 248
GL V+ VY+NG V+ +LD+T++++ + F+ AVS +AS++L+I YPT+ + H IN Y
Sbjct: 184 GLTVVQVYDNGQVFPSSILDITDEELVSHFVSAVSTIASISLAIGYPTLPSVGHTLINNY 243
Query: 249 KNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEES 308
K++L+ A+A Y + + + + + +++P K+AAAA A +A + A A+E EE EES
Sbjct: 244 KDLLAVAIAASYHYPEIEDLVDRIENPEKYAAAAPAATSAASGDAAPAEEAAAEE-EEES 302
Query: 309 DDDMGLSLFD 318
DDDMG LFD
Sbjct: 303 DDDMGFGLFD 312
>sp|Q9C3Z6|RLA0_PODAS 60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1
Length = 314
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/264 (44%), Positives = 182/264 (68%), Gaps = 2/264 (0%)
Query: 7 KAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSI 66
K+ K Y +L LLEEY I IV+ DNV S Q+ IR LRD +VLMGKNTM++R++
Sbjct: 4 KSANKAGYFDKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRAL 63
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
+ + + L+P ++GNVG +FT GDLKE+ D++ +KVAAPAR G VAP+DV +
Sbjct: 64 KTFLVDSPEYE--RLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWI 121
Query: 127 PPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPF 186
P GNTG++P +TSFFQ L +PTKI +GT+EI T ++L++ G +VG SE+ LL+ L I PF
Sbjct: 122 PAGNTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPF 181
Query: 187 SYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFIN 246
+YG+ + VY+ G+ + VLD++E+ + F A++ +A+++L++ +PT+ + H +N
Sbjct: 182 TYGMGIAQVYDQGNTFPSSVLDISEEQLLKAFSSAITTIAAVSLALNFPTLPSVIHSLVN 241
Query: 247 GYKNVLSFAVATEYSFSQADKVKE 270
YK VL+ A+ TE S+ + +++K+
Sbjct: 242 SYKKVLAVAIETEISWPEIEELKD 265
>sp|Q94660|RLA0_PLAF8 60S acidic ribosomal protein P0 OS=Plasmodium falciparum (isolate
7G8) GN=RPLP0 PE=2 SV=2
Length = 316
Score = 225 bits (573), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/273 (41%), Positives = 185/273 (67%), Gaps = 4/273 (1%)
Query: 4 RLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMK 63
+LSK +KK Y +L L+++YS+ILIV DNVGSNQ+ +R LR + +LMGKNT ++
Sbjct: 3 KLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTRIR 62
Query: 64 RSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAA-PARVGLVAPI 122
+++ + + + L+PL++ N+G +F K DL E+ + + +K ++ PAR+G++API
Sbjct: 63 TALKKNLQAVPQIE--KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPI 120
Query: 123 DVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLA 182
DV +PPG TG+DPS TSF + L I TKI KG +EI V LIK+G++V +S + LL K
Sbjct: 121 DVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFN 180
Query: 183 IKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPH 242
+ P SYG+ V +VY++G +Y +VLD+T++DI KF + VS VA+L+ + T A+ PH
Sbjct: 181 MNP-SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPH 239
Query: 243 FFINGYKNVLSFAVATEYSFSQADKVKEYLKDP 275
F+ +KN+++ + ++Y+F +K+++++P
Sbjct: 240 VFVEAFKNIVALIIDSDYTFPLMKILKKWVENP 272
>sp|P22685|RLA0_DICDI 60S acidic ribosomal protein P0 OS=Dictyostelium discoideum
GN=rplp0 PE=1 SV=2
Length = 305
Score = 222 bits (566), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 134/311 (43%), Positives = 197/311 (63%), Gaps = 11/311 (3%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIR 67
+++K + + KL Y ++++ AD VGS+QLQ IR +R VLMGK TM+++ IR
Sbjct: 6 SKRKNVFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIR 65
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
A+ D LN L+ N +IF K ++ EV ++ +V APA+ G+ AP DV++P
Sbjct: 66 DLADSKPELDALN--TYLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIP 123
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFS 187
G TG++P+QTSF Q L I TKIN+G ++I+ V +IK G +VG+SE+ LL KL IKPF+
Sbjct: 124 AGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFT 183
Query: 188 YGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFING 247
YGL +Y+ G+ YSP + +E+D+ KF + + +A+++L I YPT+A+ PH +N
Sbjct: 184 YGLEPKIIYDAGACYSPSI---SEEDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNA 240
Query: 248 YKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEE 307
+KN+L+ + T Y+F A+K K AAA AA + AAP AAAK+ EE EE
Sbjct: 241 FKNLLAISFETSYTFDAAEKFKSAA------AAAPVAAAPSAAAPAAAAKKVVVEEKKEE 294
Query: 308 SDDDMGLSLFD 318
SDDDMG+ LFD
Sbjct: 295 SDDDMGMGLFD 305
>sp|Q967Y7|RLA0_EIMTE 60S acidic ribosomal protein P0 OS=Eimeria tenella PE=2 SV=1
Length = 314
Score = 214 bits (545), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/311 (45%), Positives = 200/311 (64%), Gaps = 2/311 (0%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIR 67
A K+ Y RL +L+ E+ ++L+V+AD+VGS QL IR LR + VLMGKNT ++ ++R
Sbjct: 6 AAKRREYFPRLLQLVLEHPRVLVVSADHVGSKQLAGIRVALRGQATVLMGKNTKIRTALR 65
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
++ L + L NVG IF + D V V +HKV APA+ G+ AP DV +P
Sbjct: 66 QQLQQQPQLQALLPLVRL--NVGFIFCRADPAAVRAVVQQHKVPAPAKQGVTAPTDVFIP 123
Query: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFS 187
G TG+DP T FFQ L I TKI KG +EI V+LI++G+RV +S + LL KL++KPF+
Sbjct: 124 AGPTGMDPGSTGFFQALGISTKIVKGQIEIQQAVQLIRRGERVSASAATLLHKLSVKPFT 183
Query: 188 YGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFING 247
YGL V VY+NGSVYS VLD+T++ I F + VA+++ ++ P+ AAAPH +
Sbjct: 184 YGLKVEHVYDNGSVYSASVLDITDEQILEAFAAGAANVAAVSRAVGLPSAAAAPHSILEA 243
Query: 248 YKNVLSFAVATEYSFSQADKVKEYLKDPSKFAAAAAPAAAARAAPVAAAKEEKKEEPAEE 307
++N + + T + F Q ++KE +++P+ FAAAAAPAAAA AA AAA + + E EE
Sbjct: 244 FRNCAALCLDTPFCFPQMQRLKEMVENPAAFAAAAAPAAAAPAAAPAAAAKAPEPEEEEE 303
Query: 308 SDDDMGLSLFD 318
D DMG SLFD
Sbjct: 304 EDGDMGFSLFD 314
>sp|P26796|RLA0_TRYCR 60S acidic ribosomal protein P0 OS=Trypanosoma cruzi PE=2 SV=2
Length = 323
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/268 (41%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 6 SKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRS 65
S +E K Y+ R L +Y ++L DNV S Q+ +R LR ++MGK T+ K+
Sbjct: 3 SVSEAKREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKI 62
Query: 66 IRLHAERTG----NRDLLNLI---PLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGL 118
+ AE ++ L N LL GN +IFT ++ ++ + KH+V APARVG
Sbjct: 63 VERRAEDKKASAYDKLLYNTCIEKKLLCGNTALIFTNEEIPVITAVLDKHRVQAPARVGA 122
Query: 119 VAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALL 178
+AP DV+VP GNTG++P TSFFQ LNI TKI KGTVEI++ +++ GDRV +S + LL
Sbjct: 123 IAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDNSTATLL 182
Query: 179 SKLAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIA 238
KL I PF Y + V SV++ G ++ E L +T+D + LE +S VA+L+L PT A
Sbjct: 183 QKLDISPFYYQVEVQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAA 242
Query: 239 AAPHFFINGYKNVLSFAVATEYSFSQAD 266
PH ++ +K +L +VATEY F + D
Sbjct: 243 TLPHMIMDAFKTLLGASVATEYEFDEFD 270
>sp|P39096|RLA0_LEICH 60S acidic ribosomal protein P0 OS=Leishmania chagasi GN=LCP0 PE=3
SV=1
Length = 322
Score = 198 bits (504), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 156/261 (59%), Gaps = 8/261 (3%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
K Y+ RL L +YS +L V DNV S Q+ +R G R + +MGK T+ + + A
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVRRGCRGKAEFIMGKKTLQAKIVEKRA 67
Query: 71 -------ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
E D LL GN G+IFT ++E++ + H+V APARVG + P D
Sbjct: 68 QAKDASPEAKPFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDGHRVKAPARVGAI-PCD 126
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
VVVP G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GD+V +S + LL KL I
Sbjct: 127 VVVPAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNI 186
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PF Y + V+SV++ G +++ E L +TED + +E +S VA++AL PT +
Sbjct: 187 SPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPM 246
Query: 244 FINGYKNVLSFAVATEYSFSQ 264
++ +KN+L+ +VAT Y F +
Sbjct: 247 LVDAFKNLLAVSVATSYEFEE 267
>sp|P39097|RLA0_LEIIN 60S acidic ribosomal protein P0 OS=Leishmania infantum GN=LIPO-A
PE=3 SV=1
Length = 323
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 153/261 (58%), Gaps = 7/261 (2%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
K Y+ RL L +YS +L V DNV S Q+ + LR + +MGK T+ + + A
Sbjct: 8 KREYEERLVDCLTKYSCVLFVGMDNVRSQQVHDVGRALRAKAEFMMGKKTLQGKIVEKRA 67
Query: 71 -------ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPID 123
E D LL GN G+IFT ++E++ + H+V ARVG ++P D
Sbjct: 68 QAKDASPEAKHFNDQCEEYNLLSGNTGLIFTNNAVQEITSVLDAHRVKRAARVGAISPCD 127
Query: 124 VVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAI 183
V+V G+TG++P+QTSFFQ LNI TKI KG VEI+T +++ GD+V +S + LL KL I
Sbjct: 128 VIVAAGSTGMEPTQTSFFQALNIATKIAKGMVEIVTEKKVLSVGDKVDNSTATLLQKLNI 187
Query: 184 KPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHF 243
PF Y + V+SV++ G +++ E L +TED + +E +S VA++AL PT +
Sbjct: 188 SPFYYQVNVLSVWDRGVLFTREDLMMTEDMVEKMLMEGLSNVAAMALGAGIPTSSTIGPM 247
Query: 244 FINGYKNVLSFAVATEYSFSQ 264
++ +KN+L+ +VAT Y F +
Sbjct: 248 LVDAFKNLLAVSVATSYEFEE 268
>sp|Q8SRJ7|RLA0_ENCCU 60S acidic ribosomal protein P0 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPP0 PE=1 SV=1
Length = 290
Score = 169 bits (429), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 158/268 (58%), Gaps = 5/268 (1%)
Query: 1 MATRLSKAEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNT 60
M + +K K++ Y+ R KL E YS+ +V +NV S QL+ I+ ++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYE-RARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNS 83
Query: 61 MMKRSIRLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVA 120
++R+I G +L + L++G+V +F KG+ +++ + ++ A A+VG VA
Sbjct: 84 AIRRAI----ADLGKPELSGVYDLVKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVA 139
Query: 121 PIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSK 180
DV V TG+ P +TS+FQ L I TKI KG VEII+P +++ +GD+VG S++ LL
Sbjct: 140 QRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGM 199
Query: 181 LAIKPFSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAA 240
L IKPF Y + + +YE+G +Y ++D+ E+DI T A+S VA+ +L T A+
Sbjct: 200 LNIKPFCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASM 259
Query: 241 PHFFINGYKNVLSFAVATEYSFSQADKV 268
P+ N +K++L ++ ++ + V
Sbjct: 260 PYNVRNAFKDILHVSLGADFMIKEQSMV 287
>sp|Q9Y8J3|RLA0_METVO Acidic ribosomal protein P0 homolog (Fragment) OS=Methanococcus
voltae GN=rplP0 PE=3 SV=1
Length = 297
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L +LL+ + I ++ V S QLQ IR +RD + M +NT+MKR+I AE TGN
Sbjct: 21 LKELLKSGNVIALIDMMEVPSVQLQEIRDTIRDSMTLKMSRNTLMKRAIEEVAEETGNPS 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
LI ++ +I T+ + ++ +++ K AP + G AP D+ + G+TG+ P
Sbjct: 81 FTKLIDCMEKGAALIATEMNPFKLYKTLNESKSPAPIKAGATAPCDIEIKAGSTGMPPGP 140
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
S + + +P I KG + I + K+GD V + + +LSKL IKP GL V+ VY
Sbjct: 141 FLSELKAVGLPAAIEKGKIGIKEDTIVAKEGDVVSAKLAVVLSKLDIKPMEVGLNVLGVY 200
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
E+G VY PE+L + ED+ K A + +L+++ PT A + N + AV
Sbjct: 201 EDGIVYDPEILKIDEDEFLAKLQSAYTGAFNLSVNAVIPTSATIETIVQKAFSN--AKAV 258
Query: 257 ATEYSF 262
+ E +F
Sbjct: 259 SIEGAF 264
>sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1
Length = 335
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L +LL+ S I ++ V + QLQ IR +RD + M +NT+MKR+I AE TGN +
Sbjct: 21 LKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPE 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
L+ + +I T+ + ++ + + K AP + G VAP D+ + G+TG+ P
Sbjct: 81 FAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAVAPCDIEIKAGSTGMPPGP 140
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
S + + +P I+KG + I ++K+G+ V S +LS L IKP + GL V+ VY
Sbjct: 141 FLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQKLSVVLSALGIKPVTVGLNVLGVY 200
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
E+G +Y+ L + E++ K +A + +L+++ PT A + + + AV
Sbjct: 201 EDGIIYTESDLKIDEEEFIGKIQKAYTSAFNLSVNAVIPTSATVETIVQKAFND--AKAV 258
Query: 257 ATEYSF 262
+ E +F
Sbjct: 259 SVESAF 264
>sp|P13553|RLA0_HALSA Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=rplP0 PE=3
SV=1
Length = 352
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 16 ARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGN 75
A L LLE Y + +V + S QLQ +R GL + + M +NT++ R++ E G+
Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD 76
Query: 76 RDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP 135
L L ++G VG++ T + + ++ K AP G VAP D+VVP G+TG+DP
Sbjct: 77 G-LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
Query: 136 SQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMS 194
Q + +I +G+++++ + ++G+ V S +LS+L I+P GL +
Sbjct: 136 GPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRG 195
Query: 195 VYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSF 254
V+ G +++PE L++ D+ A + +L+++ YPT AP G S
Sbjct: 196 VFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKGRGEAKSL 255
Query: 255 AV 256
+
Sbjct: 256 GL 257
>sp|B0R4W1|RLA0_HALS3 Acidic ribosomal protein P0 homolog OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=rplP0 PE=3 SV=1
Length = 352
Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 16 ARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGN 75
A L LLE Y + +V + S QLQ +R GL + + M +NT++ R++ E G+
Sbjct: 21 AELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVRAL----EEAGD 76
Query: 76 RDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP 135
L L ++G VG++ T + + ++ K AP G VAP D+VVP G+TG+DP
Sbjct: 77 G-LDTLTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDP 135
Query: 136 SQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMS 194
Q + +I +G+++++ + ++G+ V S +LS+L I+P GL +
Sbjct: 136 GPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRG 195
Query: 195 VYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSF 254
V+ G +++PE L++ D+ A + +L+++ YPT AP G S
Sbjct: 196 VFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKGRGEAKSL 255
Query: 255 AV 256
+
Sbjct: 256 GL 257
>sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1
Length = 335
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 3/246 (1%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L +LL+ S I ++ V + QLQ IR +RD + M +NT+MKR+I AE TGN +
Sbjct: 21 LKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPE 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
L L +I T+ + ++ + + K AP + G AP D+ V G+TG+ P
Sbjct: 81 FAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATAPCDIEVKAGSTGMPPGP 140
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
S + + IP I+KG + I +IK+G+ V + +LS L IKP + GL V+ VY
Sbjct: 141 FLSELKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLSALGIKPVTVGLNVLGVY 200
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
E+G +Y+ L + E++ K +A + +L+++ PT A + + + AV
Sbjct: 201 EDGVIYTESELRIDEEEFIGKIQKAYTSAFNLSVNAVIPTSATVETIVQKAFND--AKAV 258
Query: 257 ATEYSF 262
+ E +F
Sbjct: 259 SVESAF 264
>sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2
Length = 336
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L +LL+ + I ++ V + QLQ IR +RD + M +NT++KR++ AE TGN +
Sbjct: 21 LKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLIKRAVEEVAEETGNPE 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
L+ L ++ T+ + ++ + + K AP + G +AP D+ V G+TG+ P
Sbjct: 81 FAKLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGP 140
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
S + + IP I+KG + I + K+GD + + +LS L IKP + GL V+ VY
Sbjct: 141 FLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVY 200
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
E G +Y+ +VL + E++ K +A + +L+++ PT A + + + AV
Sbjct: 201 EEGVIYTSDVLRIDEEEFLGKLQKAYTNAFNLSVNAVIPTSATIETIVQKAFND--AKAV 258
Query: 257 ATEYSF 262
+ E +F
Sbjct: 259 SVESAF 264
>sp|B6YSX9|RLA0_THEON Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus
(strain NA1) GN=rplP0 PE=3 SV=1
Length = 339
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 128/254 (50%), Gaps = 1/254 (0%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIR 67
AE K L +++ Y I +V NV + L +R LR +++ + +NT+++ +I+
Sbjct: 5 AEWKKKEVEELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIK 64
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
A+ G +L LI +QG G++ T+ + ++ + + K APA+ G+ P DVV+P
Sbjct: 65 RAAQELGKPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIP 124
Query: 128 PGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPF 186
G T + P Q L IP +I KG V I ++K G+ + + +L+ L I+P
Sbjct: 125 AGPTSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPL 184
Query: 187 SYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFIN 246
GL +++ YE+G VY+PEVL + E++ +A +L+++ YPT
Sbjct: 185 EVGLNLLAAYEDGIVYTPEVLAIDEEEYINLLQQAYMHAFNLSVNTAYPTSQTIEAIIQK 244
Query: 247 GYKNVLSFAVATEY 260
Y + AV Y
Sbjct: 245 AYLGAKNVAVEAGY 258
>sp|Q6M0L1|RLA0_METMP Acidic ribosomal protein P0 homolog OS=Methanococcus maripaludis
(strain S2 / LL) GN=rplP0 PE=3 SV=1
Length = 335
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 130/246 (52%), Gaps = 3/246 (1%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
L +LL+ + I ++ V + QLQ IR +RD + M +NT+MKR+I AE TGN +
Sbjct: 21 LKELLKSSNIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNTLMKRAIEEVAEETGNPE 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
L+ + +I T+ + ++ + + K AP + G +AP D+ V G+TG+ P
Sbjct: 81 FAKLVDYMDKGAAIIATEMNPFKLYKTLDESKSPAPVKGGAIAPCDIEVKAGSTGMPPGP 140
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
S + + IP I+KG + I ++K+G+ V + +LS L IKP + GL V+ VY
Sbjct: 141 FLSELKAVGIPAAIDKGKIGIKEDKIVVKEGEVVSQKLAVVLSALDIKPVTVGLNVLGVY 200
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
E+G +Y+ L + E++ K +A + +L+++ PT A + + + AV
Sbjct: 201 EDGVIYTESDLKIDEEEFVGKIQKAYTSAFNLSVNAVIPTSATVETIVQKAFND--AKAV 258
Query: 257 ATEYSF 262
+ E +F
Sbjct: 259 SVESAF 264
>sp|Q3INI7|RLA0_NATPD Acidic ribosomal protein P0 homolog OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=rplP0 PE=3 SV=1
Length = 354
Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 115/229 (50%), Gaps = 6/229 (2%)
Query: 17 RLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNR 76
L LE Y + +V + S QLQ +R L + + + +NT+M+R++ G
Sbjct: 21 ELVAFLERYESVGVVDITGIPSRQLQDMRRDLHGTAALRVSRNTLMERALN-----EGGD 75
Query: 77 DLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPS 136
L L+ ++G VG+I T + + ++ + K AP G VAP D+V+P G+TG+DP
Sbjct: 76 GLGELVEHVEGQVGLIGTNDNPFGLYQQLEESKTPAPINAGEVAPNDIVIPEGDTGVDPG 135
Query: 137 Q-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSV 195
Q + +I G+++++ ++ G+ V S S +LS+L I+P GL + V
Sbjct: 136 PFVGDLQQVGANARIEGGSIKVVEDSTVLSAGEEVSSDLSNVLSELGIEPKEVGLDLRGV 195
Query: 196 YENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFF 244
G ++SPE LD+ + T A S +L+++ YPT AP
Sbjct: 196 SSEGVLFSPEELDIDVESYRTDIESAASAARNLSVNAEYPTARTAPSML 244
>sp|Q5JH36|RLA0_PYRKO Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=rplP0 PE=3
SV=1
Length = 340
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 17 RLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNR 76
L +++ Y I +V V + L +R LR +++ + +NT+++ +I+ A+ G
Sbjct: 14 ELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQP 73
Query: 77 DLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPS 136
+L LI +QG ++ T+ + ++ + + K APA+ G V P DVV+P G T L P
Sbjct: 74 ELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPG 133
Query: 137 Q-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSV 195
Q L IP +I KG V I ++K G+ + + +L+ L I+P GL +++
Sbjct: 134 PLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAA 193
Query: 196 YENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFA 255
YE+G VY+P+VL + E + +A +L+++I YPT Y + A
Sbjct: 194 YEDGIVYTPDVLAIDESEYINMLQKAYMHAFNLSVNIAYPTKQTIEAILQKAYLGAKNVA 253
Query: 256 VATEY 260
V Y
Sbjct: 254 VEAGY 258
>sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Methanococcus
thermolithotrophicus GN=rplP0 PE=3 SV=1
Length = 338
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 129/253 (50%), Gaps = 3/253 (1%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
KI +L +LL+ + +V V + QLQ IR +R + M +NT+++R+I+ A
Sbjct: 14 KIEEVNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVA 73
Query: 71 ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGN 130
E TGN + L + +I T + ++ + + K AP + G VAP D+ V G+
Sbjct: 74 EETGNPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGS 133
Query: 131 TGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYG 189
TG+ P + + IP I KG + I + K G+ V + +LS L IKP + G
Sbjct: 134 TGMPPGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVTVG 193
Query: 190 LIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYK 249
L +++ YE+G +Y+P+VL + E++ K +A S+ +L+++ PT +
Sbjct: 194 LNLLAAYEDGVIYTPDVLKIDEEEFVQKIQDAYSKAFNLSVNAAIPTAQTIETLLQKAFA 253
Query: 250 NVLSFAVATEYSF 262
N + AV+ E +F
Sbjct: 254 N--ARAVSIESAF 264
>sp|O74109|RLA0_PYRHO Acidic ribosomal protein P0 homolog OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=rplP0 PE=1 SV=1
Length = 342
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 130/255 (50%), Gaps = 2/255 (0%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVL-MGKNTMMKRSI 66
AE K L KL++ Y I +V ++ + L +R +R++ +L + +NT+++ +I
Sbjct: 5 AEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAI 64
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
+ A+ G +L L+ + G++ T + ++ + +++ APA+ G V P DVVV
Sbjct: 65 KKAAKELGKPELEKLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVV 124
Query: 127 PPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKP 185
P G T L P Q L IP +I KG V I ++K G+ + + +L+ L I+P
Sbjct: 125 PAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQP 184
Query: 186 FSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFI 245
GL V++VYE+G VY+P+VL + E + +A +LA++I YPT
Sbjct: 185 LEVGLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQ 244
Query: 246 NGYKNVLSFAVATEY 260
+ N + A+ Y
Sbjct: 245 KAFLNAKTVAIEAGY 259
>sp|P15825|RLA0_HALMA 50S ribosomal protein L10E OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rplP0 PE=1
SV=2
Length = 348
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 123/240 (51%), Gaps = 6/240 (2%)
Query: 18 LCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRD 77
+ +++E Y + +V + S QLQ +R L + + + +NT+++R+ L G D
Sbjct: 23 IVEMIESYESVGVVNIAGIPSRQLQDMRRDLHGTAELRVSRNTLLERA--LDDVDDGLED 80
Query: 78 LLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPSQ 137
L I G VG+I T + + E+ K AP G VAP D+V+P G+TG+DP
Sbjct: 81 LNGYI---TGQVGLIGTDDNPFSLFQELEASKTPAPIGAGEVAPNDIVIPEGDTGVDPGP 137
Query: 138 -TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVY 196
Q + +I +G++++++ ++ G+ V S +L++L I+P GL + +V+
Sbjct: 138 FVGELQSVGADARIQEGSIQVLSDSTVLDTGEEVSQELSNVLNELGIEPKEVGLDLRAVF 197
Query: 197 ENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAV 256
+G ++ PE L+L D+ + A R +L+++ YPT AP + N S A+
Sbjct: 198 ADGVLFEPEELELDIDEYRSDIQAAAGRAFNLSVNADYPTATTAPTMLQSARGNAKSLAL 257
>sp|Q8TZJ8|RLA0_PYRFU Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=rplP0 PE=1
SV=1
Length = 339
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 2/255 (0%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVL-MGKNTMMKRSI 66
AE K L L++ Y + +V ++ + L +R +R+++ +L + +NT+++ +I
Sbjct: 5 AEWKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAI 64
Query: 67 RLHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVV 126
+ A+ G +L LI ++G G++ T + ++ + +++ APA+ G P DVV+
Sbjct: 65 KKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVI 124
Query: 127 PPGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKP 185
P G T L P Q + IP +I +G V I ++K G+ + + +L+ L I+P
Sbjct: 125 PAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQP 184
Query: 186 FSYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFI 245
GL +++VYE+G +Y+P+VL + E + +A +LA++I YPT
Sbjct: 185 LEVGLDLLAVYEDGIIYTPDVLAIDESEYINMLQKAYMHAFNLAVNIAYPTPQTIEAIIQ 244
Query: 246 NGYKNVLSFAVATEY 260
+ N + AV Y
Sbjct: 245 KAFLNAKAVAVEAGY 259
>sp|C6A1F5|RLA0_THESM Acidic ribosomal protein P0 homolog OS=Thermococcus sibiricus
(strain MM 739 / DSM 12597) GN=rplP0 PE=3 SV=1
Length = 338
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/230 (32%), Positives = 128/230 (55%), Gaps = 1/230 (0%)
Query: 8 AEKKIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIR 67
AE K L KLL++Y I +V +V + L +R LRD +++ + +NT+++ +++
Sbjct: 5 AEWKKKEVEELTKLLQDYPVIALVDVADVPAYPLSKMRESLRDKAVLRVSRNTLIELALK 64
Query: 68 LHAERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVP 127
A+ + +L LI +QG G++ TK + ++ + + K APA+ G AP DVVVP
Sbjct: 65 KAAQELNDSNLEKLIEHIQGGTGILVTKINPFKLYKFLEESKKPAPAKAGAPAPRDVVVP 124
Query: 128 PGNTGLDPSQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPF 186
G T L P Q L IP +I KG V I ++K G+ + + +L++L I+P
Sbjct: 125 AGPTPLSPGPLVGEMQALGIPARIEKGKVSIQKDTVVLKAGEIITPQLANILNQLGIEPL 184
Query: 187 SYGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPT 236
GL +++ YE+G VY+PEVL + E+ + +A +L++++ YPT
Sbjct: 185 EVGLKLLAAYEHGIVYTPEVLAIDEEQYISMLQQAYMHAFNLSVNVAYPT 234
>sp|Q6L1X8|RLA0_PICTO Acidic ribosomal protein P0 homolog OS=Picrophilus torridus (strain
ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
GN=rplP0 PE=3 SV=1
Length = 315
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 5/232 (2%)
Query: 30 IVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHAERTGNRDLLNLIPLLQGNV 89
IV+ + +N+ Q IR +RD + + + + R +RL E TG +++ L G V
Sbjct: 27 IVSIKGLRNNEFQKIRNSIRDKARIKVSR----ARLLRLAIENTGKNNIVKLKDYAHGQV 82
Query: 90 GMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDPS-QTSFFQVLNIPT 148
+I T K++ D + K K APA+ G +A D+V+ P T P + S FQ +P
Sbjct: 83 ALITTDESPKKIYDILEKSKTKAPAKGGEIAEEDIVIEPKETNFPPGPKISEFQKAGLPA 142
Query: 149 KINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMSVYENGSVYSPEVLD 208
I KG + I + V +KKGD + ++ +L L I P + GL +++ YE+G +++ +VL
Sbjct: 143 AIEKGKIVIKSEVTFVKKGDVITREKALVLKDLEIYPITAGLDLIAAYEDGLIFNKDVLS 202
Query: 209 LTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSFAVATEY 260
++++ I + A SLA+ + P Y S A+ +
Sbjct: 203 ISDEKIMSDLASAFLGAKSLAIEANFIVPEIVPDMISKAYLEAQSLAIEANF 254
>sp|Q8TX50|RLA0_METKA Acidic ribosomal protein P0 homolog OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=rplP0 PE=3 SV=2
Length = 357
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 124/242 (51%), Gaps = 4/242 (1%)
Query: 17 RLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDH-SIVLMGKNTMMKRSIRLHAERTGN 75
L +L++EY + +V + + + QLQ IRA LR+ +I+ M +NT+M+ I L +
Sbjct: 27 ELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNTLMR--IALEEKLDER 84
Query: 76 RDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGNTGLDP 135
+L L+ ++G V IFT D ++ + + K +APA+ G +AP D+VVP G T +P
Sbjct: 85 PELEPLLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEP 144
Query: 136 SQ-TSFFQVLNIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFSYGLIVMS 194
S Q +P +I G V I L+K+G+ + + +L KL I+P G+ +++
Sbjct: 145 GPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVA 204
Query: 195 VYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPTIAAAPHFFINGYKNVLSF 254
+ G+++ + L + D+ EA +L+++ PT A + L+
Sbjct: 205 IVAEGTLFERDDLAIDFDEYEDMAKEAAQHAFNLSINAAIPTAETADVIVAKAHTEALNL 264
Query: 255 AV 256
AV
Sbjct: 265 AV 266
>sp|A6UTF8|RLA0_META3 Acidic ribosomal protein P0 homolog OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1
Length = 338
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 5/229 (2%)
Query: 11 KIAYDARLCKLLEEYSQILIVAADNVGSNQLQHIRAGLRDHSIVLMGKNTMMKRSIRLHA 70
KI L KLL+E I +V V + QLQ IR +RD + M +NT++KR+I A
Sbjct: 13 KIEEVNNLKKLLKEGQVIALVDMMEVPAVQLQEIRDNIRDLMTLRMSRNTLIKRAIEELA 72
Query: 71 ERTGNRDLLNLIPLLQGNVGMIFTKGDLKEVSDEVSKHKVAAPARVGLVAPIDVVVPPGN 130
E + + L L+ ++ T + ++ + K AP + G +AP D+VV G+
Sbjct: 73 EESNDPKFAKLAECLERGAAIVITDMNPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGS 132
Query: 131 TGLDPSQTSFFQVL---NIPTKINKGTVEIITPVELIKKGDRVGSSESALLSKLAIKPFS 187
TG+ P F L +P I+KG + I ++K+G+ V + +LS L IKP
Sbjct: 133 TGMPPG--PFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVLSALGIKPTK 190
Query: 188 YGLIVMSVYENGSVYSPEVLDLTEDDIATKFLEAVSRVASLALSIRYPT 236
GL +++ YE+G VY+ +VL + E++ A + +L+++ PT
Sbjct: 191 VGLDLLAAYEDGIVYTSDVLKIDEEEFVQNIQSAFTSAFNLSVNAAIPT 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,854,372
Number of Sequences: 539616
Number of extensions: 4615500
Number of successful extensions: 25726
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 24492
Number of HSP's gapped (non-prelim): 571
length of query: 318
length of database: 191,569,459
effective HSP length: 117
effective length of query: 201
effective length of database: 128,434,387
effective search space: 25815311787
effective search space used: 25815311787
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)