Query         036255
Match_columns 439
No_of_seqs    171 out of 2247
Neff          11.1
Searched_HMMs 46136
Date          Fri Mar 29 10:55:38 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036255.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036255hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 3.1E-78 6.8E-83  562.0  41.5  430    5-438    24-487 (489)
  2 PLN02774 brassinosteroid-6-oxi 100.0 1.3E-77 2.9E-82  570.5  41.5  431    4-437    28-462 (463)
  3 PLN03141 3-epi-6-deoxocathaste 100.0 1.8E-77 3.8E-82  568.4  41.4  434    2-438     2-449 (452)
  4 PLN02196 abscisic acid 8'-hydr 100.0 2.4E-77 5.2E-82  568.2  41.7  430    3-438    31-462 (463)
  5 PLN02500 cytochrome P450 90B1  100.0 2.6E-77 5.7E-82  573.0  42.1  428    5-437    36-488 (490)
  6 KOG0158 Cytochrome P450 CYP3/C 100.0 2.6E-76 5.7E-81  540.5  38.9  431    5-439    29-499 (499)
  7 PLN02302 ent-kaurenoic acid ox 100.0 1.3E-74 2.7E-79  556.9  43.5  435    4-439    39-488 (490)
  8 PLN02971 tryptophan N-hydroxyl 100.0 4.9E-74 1.1E-78  554.7  42.1  429    5-438    55-533 (543)
  9 PLN02290 cytokinin trans-hydro 100.0 6.2E-74 1.3E-78  553.7  41.1  428    6-439    41-515 (516)
 10 PTZ00404 cytochrome P450; Prov 100.0   2E-73 4.4E-78  545.9  39.6  426    5-438    27-482 (482)
 11 PLN02183 ferulate 5-hydroxylas 100.0 5.5E-73 1.2E-77  545.7  42.2  408    5-418    34-483 (516)
 12 PLN02687 flavonoid 3'-monooxyg 100.0   1E-72 2.2E-77  544.0  41.4  429    5-438    32-508 (517)
 13 PLN00110 flavonoid 3',5'-hydro 100.0 1.2E-72 2.6E-77  540.2  41.5  431    3-438    27-496 (504)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 2.1E-74 4.6E-79  547.6  28.8  427    6-439    34-496 (497)
 15 PLN00168 Cytochrome P450; Prov 100.0 2.4E-72 5.2E-77  541.6  43.0  433    4-439    32-517 (519)
 16 PLN03234 cytochrome P450 83B1; 100.0 2.1E-72 4.6E-77  541.2  41.7  431    4-438    25-498 (499)
 17 PLN02987 Cytochrome P450, fami 100.0 2.2E-72 4.8E-77  532.3  40.1  427    5-438    28-468 (472)
 18 PLN02966 cytochrome P450 83A1  100.0 1.6E-71 3.4E-76  534.2  41.6  413    4-418    26-471 (502)
 19 PLN02169 fatty acid (omega-1)- 100.0 1.1E-71 2.5E-76  532.3  38.9  421    6-438    30-499 (500)
 20 PF00067 p450:  Cytochrome P450 100.0 3.7E-72   8E-77  538.5  33.8  422    9-435     1-463 (463)
 21 PLN02655 ent-kaurene oxidase   100.0 7.5E-71 1.6E-75  524.6  41.9  422    9-439     1-464 (466)
 22 PLN02394 trans-cinnamate 4-mon 100.0 4.2E-71   9E-76  532.7  40.6  430    4-439    27-502 (503)
 23 KOG0159 Cytochrome P450 CYP11/ 100.0 1.3E-71 2.7E-76  497.7  33.6  425    5-438    48-517 (519)
 24 PLN03112 cytochrome P450 famil 100.0 8.9E-71 1.9E-75  531.4  42.2  430    5-439    30-508 (514)
 25 PLN03195 fatty acid omega-hydr 100.0 7.7E-71 1.7E-75  531.7  38.5  431    6-439    29-516 (516)
 26 PLN03018 homomethionine N-hydr 100.0 4.6E-70   1E-74  523.1  43.1  429    6-438    39-523 (534)
 27 KOG0684 Cytochrome P450 [Secon 100.0   2E-70 4.4E-75  477.8  34.1  428    7-439    31-485 (486)
 28 PLN02738 carotene beta-ring hy 100.0   1E-69 2.2E-74  526.1  40.1  412   18-439   142-595 (633)
 29 PLN02936 epsilon-ring hydroxyl 100.0 2.6E-68 5.7E-73  509.3  38.2  422    7-438    12-481 (489)
 30 PLN02426 cytochrome P450, fami 100.0 1.9E-65 4.2E-70  488.7  38.6  413   14-439    48-500 (502)
 31 PLN02648 allene oxide synthase 100.0 1.1E-63 2.3E-68  469.3  27.3  395    5-420    15-465 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 4.7E-59   1E-63  433.1  34.1  378   29-438    24-410 (411)
 33 PF05952 ComX:  Bacillus compet  57.5      11 0.00024   23.9   2.2   21  262-282     3-23  (57)
 34 KOG3506 40S ribosomal protein   52.1     6.4 0.00014   24.3   0.6   10  381-390    13-22  (56)
 35 PF09201 SRX:  SRX;  InterPro:   45.3      18 0.00039   27.5   2.1   23  387-409    18-40  (148)
 36 PF12508 DUF3714:  Protein of u  43.9      20 0.00042   29.8   2.3   43  304-347    52-94  (200)
 37 KOG0114 Predicted RNA-binding   40.9 1.1E+02  0.0023   22.4   5.2   62    6-70     11-78  (124)
 38 PHA03162 hypothetical protein;  39.2      19  0.0004   27.1   1.4   24  383-406     2-25  (135)
 39 PF09926 DUF2158:  Uncharacteri  38.5      33 0.00071   21.5   2.2   18   40-57      3-20  (53)
 40 PF13893 RRM_5:  RNA recognitio  36.7   1E+02  0.0022   19.0   4.6   34   34-67      2-39  (56)
 41 KOG4189 Uncharacterized conser  34.0 2.1E+02  0.0046   23.5   6.5   48  238-285   129-178 (209)
 42 PLN03134 glycine-rich RNA-bind  33.6 1.2E+02  0.0027   23.6   5.3   39   30-68     48-95  (144)
 43 PF13625 Helicase_C_3:  Helicas  33.4      74  0.0016   24.3   4.0   42   27-70     74-115 (129)
 44 COG4383 Mu-like prophage prote  33.0 1.2E+02  0.0025   28.0   5.5  101  302-412   112-217 (517)
 45 PF14483 Cut8_M:  Cut8 dimerisa  32.9      73  0.0016   18.3   2.9   20  261-280    15-35  (38)
 46 PF12554 MOZART1:  Mitotic-spin  31.9 1.2E+02  0.0027   18.5   4.7   42  241-282     6-47  (48)
 47 PF08776 VASP_tetra:  VASP tetr  31.5 1.1E+02  0.0024   17.7   3.8   28  272-316    10-37  (40)
 48 PRK02302 hypothetical protein;  28.1 1.9E+02  0.0042   20.4   4.8   34   35-68     21-54  (89)
 49 COG4471 Uncharacterized protei  26.9 2.1E+02  0.0046   20.1   4.7   35   34-68     19-53  (90)
 50 COG2101 SPT15 TATA-box binding  26.8      20 0.00044   28.6  -0.1   31  364-394    36-71  (185)
 51 PF11227 DUF3025:  Protein of u  26.3      43 0.00093   28.0   1.6   21  349-369   191-211 (212)
 52 KOG0107 Alternative splicing f  25.8 1.3E+02  0.0028   24.4   4.0   46   17-65     14-63  (195)
 53 PRK02886 hypothetical protein;  25.4 2.3E+02  0.0051   19.9   4.8   34   35-68     19-52  (87)
 54 PF00076 RRM_1:  RNA recognitio  24.5   2E+02  0.0042   18.3   5.2   49   17-68      2-58  (70)
 55 PF14129 DUF4296:  Domain of un  23.9 2.6E+02  0.0056   19.5   6.7   50  238-287    30-79  (87)
 56 PF09902 DUF2129:  Uncharacteri  23.2 2.1E+02  0.0046   19.2   4.2   33   36-68     16-48  (71)
 57 PF14550 Peptidase_U35_2:  Puta  21.8      63  0.0014   24.4   1.7   22  326-347    71-92  (122)
 58 PF08492 SRP72:  SRP72 RNA-bind  21.2      64  0.0014   20.7   1.4    7  366-372    44-50  (59)
 59 COG1707 ACT domain-containing   21.2      86  0.0019   24.9   2.3   40   24-63    151-195 (218)
 60 PF15300 INT_SG_DDX_CT_C:  INTS  20.9      52  0.0011   21.6   0.9   13  305-317    41-53  (65)
 61 COG1759 5-formaminoimidazole-4  20.7 1.9E+02  0.0042   26.1   4.5   68  308-403   276-351 (361)
 62 PTZ00218 40S ribosomal protein  20.2      44 0.00095   20.9   0.5   15  381-395    11-27  (54)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-78  Score=561.97  Aligned_cols=430  Identities=25%  Similarity=0.367  Sum_probs=350.7

Q ss_pred             CCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-c-ccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-R-SKE   82 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~-~~~   82 (439)
                      +.++||||++||++||++++....++..+.++.++||+||++++|..++|+|++++.++|++.+++..|++++. . ...
T Consensus        24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~  103 (489)
T KOG0156|consen   24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK  103 (489)
T ss_pred             CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence            47899999999999999999533489999999999999999999999999999999999999999999998875 1 224


Q ss_pred             ccc-CCCccccC-CchHHHHHHHHhhhc-CChHHHhhcHHHHHHHHHHHHhhhcC--C-CcccHHHHHHHHHHHHHHHHH
Q 036255           83 RSI-GPWALFFH-QDGYHTRMRKLVQSS-LTPSMVRNSVSCIEATAMSTLDSWSG--G-RLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        83 ~~~-g~~~~~~~-~g~~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~--~-~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      .+. |..++.++ +|+.|+.+||+.... ++....++....-.++++.+++.+.+  + ++||+...+..++.+++++.+
T Consensus       104 ~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  104 YLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             HhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHHH
Confidence            444 45777777 899999999999765 56777777666667888888877653  2 799999999999999999999


Q ss_pred             hcCCCch----HHHHHHHHHHHHhhccc------ccc-c--cCCCc--chHHHHHHHHHHHHHHHHHHHHHhhcC--CCC
Q 036255          157 FGHLDTG----YKEILKKNYSTLDRGYN------SFP-I--YLPGS--LYATSLRARRRLDQTLSEIIKERKEKS--VAD  219 (439)
Q Consensus       157 fG~~~~~----~~~~~~~~~~~~~~~~~------~~~-~--~~p~~--~~~~~~~~~~~l~~~~~~~i~~~~~~~--~~~  219 (439)
                      ||.....    ...++.+........+.      .+| +  +++..  ..++......++..+++++++++++..  ...
T Consensus       184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~~~~~~  263 (489)
T KOG0156|consen  184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKIGDEEG  263 (489)
T ss_pred             hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCC
Confidence            9986442    22334444443333222      233 1  23311  223344445558999999999887642  222


Q ss_pred             chHHHHhhcccccCCCC-CChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 036255          220 TDLLASLMNYKDENGEH-LTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTL  298 (439)
Q Consensus       220 ~d~~~~ll~~~~~~~~~-l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  298 (439)
                      .|+++.+++..++++.. +++++|...+.++++||+|||+.|+.|++.+|++||++|+|+++||+++++.    ++.++.
T Consensus       264 ~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~vvG~----~r~v~e  339 (489)
T KOG0156|consen  264 RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEVVGK----GRLVSE  339 (489)
T ss_pred             CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCCh
Confidence            79999999886543322 9999999999999999999999999999999999999999999999999874    445999


Q ss_pred             hhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC---
Q 036255          299 AQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP---  374 (439)
Q Consensus       299 ~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~---  374 (439)
                      +|+.+||||+|+|+|++|+||++|+ ++|.+++|+.++||.|||||.|+++.|++||||++|+||++|+||||++..   
T Consensus       340 ~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP~eF~PERFl~~~d~~  419 (489)
T KOG0156|consen  340 SDLPKLPYLKAVIKETLRLHPPLPLLLPRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDPEEFKPERFLDSNDGK  419 (489)
T ss_pred             hhhccCHHHHHHHHHHHhcCCCccccccccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCccccChhhhcCCcccc
Confidence            9999999999999999999999996 579999999999999999999999999999999999999999999999853   


Q ss_pred             -CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCCCCCceEEEec
Q 036255          375 -KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       375 -~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~~~~~v~~~~R  438 (439)
                       ....++|||.|+|+|||..+|.+++.++++.||++|+|+++++...   ...+...+.++.+...+|
T Consensus       420 ~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~~~d~~e~~~~~~~~~pl~~~~~~r  487 (489)
T KOG0156|consen  420 GLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGGKVDMEEAGLTLKKKKPLKAVPVPR  487 (489)
T ss_pred             CCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCCCCCCcccccceecCCcceeeeecC
Confidence             6789999999999999999999999999999999999999876212   223334444555555554


No 2  
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.3e-77  Score=570.49  Aligned_cols=431  Identities=32%  Similarity=0.562  Sum_probs=365.1

Q ss_pred             CCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCccccc
Q 036255            4 PNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSKER   83 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~   83 (439)
                      ++++.||||+++|++||++.+. .++..++++++++||++|++++++.++++++||+.+++++.++...+..........
T Consensus        28 ~r~~~ppgp~~~P~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  106 (463)
T PLN02774         28 SKKGLPPGTMGWPLFGETTEFL-KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLD  106 (463)
T ss_pred             CCCCCCCCCCCCCchhhHHHHH-HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHH
Confidence            4567889999999999998874 667788999999999999999999999999999999999987766664443333334


Q ss_pred             ccCCCccccCCchHHHHHHHHhhhcCChHHHhh-cHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHHhcCCCc
Q 036255           84 SIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRN-SVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSIFGHLDT  162 (439)
Q Consensus        84 ~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~fG~~~~  162 (439)
                      ++|..+++..+|+.|+++|+++.+.|++..+.. +.+.+.+.+++++++|..++++|+.+.+.++++++++.++||.+..
T Consensus       107 ~lg~~~~~~~~g~~w~~~R~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~  186 (463)
T PLN02774        107 ILGTCNIAAVHGSTHRYMRGSLLSLISPTMIRDHLLPKIDEFMRSHLSGWDGLKTIDIQEKTKEMALLSALKQIAGTLSK  186 (463)
T ss_pred             HhCccchhhcCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhCCCCCEEeeHHHHHHHHHHHHHHHcCCCCh
Confidence            566557888899999999999999999988876 7888998899999988766789999999999999999999998644


Q ss_pred             hHHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHhhcccccCCCCCChHHH
Q 036255          163 GYKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKSVADTDLLASLMNYKDENGEHLTDDQI  242 (439)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~d~~~~ll~~~~~~~~~l~~~~i  242 (439)
                      .....+...+..+......++.++|...+.+..++++.+.+++.+.+++++++....+|+++.+++.. .++..++++++
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~d~l~~ll~~~-~~~~~~s~~ei  265 (463)
T PLN02774        187 PISEEFKTEFFKLVLGTLSLPIDLPGTNYRSGVQARKNIVRMLRQLIQERRASGETHTDMLGYLMRKE-GNRYKLTDEEI  265 (463)
T ss_pred             HHHHHHHHHHHHHhcccccCCcCCCChhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcccHHHHHHhCc-cCCCCCCHHHH
Confidence            44444555554444333344556676556677788999999999999988876555579999998743 22335899999


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcc
Q 036255          243 VDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVS  322 (439)
Q Consensus       243 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~  322 (439)
                      ..++.++++||+|||+.+++|++++|++||++|+++++|++++++... .+..++++++++||||+|||+|+||++|+++
T Consensus       266 ~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~~~~~~-~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~  344 (463)
T PLN02774        266 IDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKR-PEDPIDWNDYKSMRFTRAVIFETSRLATIVN  344 (463)
T ss_pred             HHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhccC-CCCCCCHHHHhcCcHHHHHHHHHHhcCCCCC
Confidence            999999999999999999999999999999999999999999975321 1346899999999999999999999999999


Q ss_pred             cceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC--CCCcccccCCCccCCccHHHHHHHHH
Q 036255          323 YTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP--KPNTFMPFGNGVHACPGSELAKLEML  400 (439)
Q Consensus       323 ~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~--~~~~~~~Fg~G~r~C~G~~~a~~~~~  400 (439)
                      .+.|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++..  ....|+|||+|+|.|||+++|++|++
T Consensus       345 ~~~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~lpFG~G~r~C~G~~~A~~e~~  424 (463)
T PLN02774        345 GVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLDKSLESHNYFFLFGGGTRLCPGKELGIVEIS  424 (463)
T ss_pred             CcccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhccCchhcCCCCcCCCccccCcCCCCCcCCcHHHHHHHHH
Confidence            8889999999999999999999999999999999999999999999998642  23469999999999999999999999


Q ss_pred             HHHHHHHhhCeeEecCCCCC-CCccccCCCCCceEEEe
Q 036255          401 VLLHHLVNEYRWEIIGPNEG-YEPFPIPRNGLPAKFWK  437 (439)
Q Consensus       401 ~~l~~ll~~~~~~~~~~~~~-~~~~~~p~~~~~v~~~~  437 (439)
                      ++++.||++|++++.++.+. ..++..|+++++|++++
T Consensus       425 ~~la~Ll~~f~~~~~~~~~~~~~~~~~p~~g~~~~~~~  462 (463)
T PLN02774        425 TFLHYFVTRYRWEEVGGDKLMKFPRVEAPNGLHIRVSP  462 (463)
T ss_pred             HHHHHHHHhceEEECCCCccccCCCCCCCCCceEEeee
Confidence            99999999999999876544 44556688999999875


No 3  
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=1.8e-77  Score=568.38  Aligned_cols=434  Identities=31%  Similarity=0.545  Sum_probs=367.8

Q ss_pred             CCCCCCCCCCCCCCccccccccccc----cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccC
Q 036255            2 SLPNPKLPPGSMGLPYIGETPKLFS----QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTY   77 (439)
Q Consensus         2 ~~~~~~~pPgp~~~P~lG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~   77 (439)
                      |-++.+.||||.++|++||++++..    .+++.++.++.++||+||++++++.+.|+++||+.+++++.+++..|+.++
T Consensus         2 ~~~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~   81 (452)
T PLN03141          2 SKKKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY   81 (452)
T ss_pred             CCCCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC
Confidence            4467788999999999999988742    467889999999999999999999999999999999999988877777654


Q ss_pred             CcccccccCCCccccCCchHHHHHHHHhhhcCChHHHhh-cHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHH
Q 036255           78 PRSKERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRN-SVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        78 ~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      ......++|..++++.+|+.|++.|+++.+.|+...+.. +.+.+.+.+.++++.|..++.+++.+.+..++++++++++
T Consensus        82 ~~~~~~l~g~~~~~~~~g~~wr~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~  161 (452)
T PLN03141         82 PKSLTELMGKSSILLINGSLQRRVHGLIGAFLKSPHLKAQITRDMERYVSESLDSWRDDPPVLVQDETKKIAFEVLVKAL  161 (452)
T ss_pred             chhHHHHhCcccccccCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhccCCCCEEhHHHHHHHHHHHHHHHH
Confidence            444555677567888999999999999999998877765 4567778888888888667789999999999999999999


Q ss_pred             hcCCCchHHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC--------CCchHHHHhhc
Q 036255          157 FGHLDTGYKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKSV--------ADTDLLASLMN  228 (439)
Q Consensus       157 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~--------~~~d~~~~ll~  228 (439)
                      ||.+.......+...+..+......++.++|...+.+..++.+++.+++.+++++++++..        ...|+++.+++
T Consensus       162 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~d~l~~ll~  241 (452)
T PLN03141        162 ISLEPGEEMEFLKKEFQEFIKGLMSLPIKLPGTRLYRSLQAKKRMVKLVKKIIEEKRRAMKNKEEDETGIPKDVVDVLLR  241 (452)
T ss_pred             cCCCchHHHHHHHHHHHHHhhhHHhCccCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccCChhhHHHHHHh
Confidence            9986544445555555555444444555566655566667889999999999988765421        13689998887


Q ss_pred             ccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHH
Q 036255          229 YKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTN  308 (439)
Q Consensus       229 ~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~  308 (439)
                      ..   +..+++++++..++.+++||+|||+.+++|++++|++||++|+++++|++++.+.....+..++.+++.+||||+
T Consensus       242 ~~---~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~Ei~~~~~~~~~~~~~~~~~~~~~lpyl~  318 (452)
T PLN03141        242 DG---SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENMKLKRLKADTGEPLYWTDYMSLPFTQ  318 (452)
T ss_pred             cC---CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHhccCCCCCCCCHHHHhccHHHH
Confidence            53   235899999999999999999999999999999999999999999999999875332234567999999999999


Q ss_pred             HHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCcc
Q 036255          309 KVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG-PKPNTFMPFGNGVH  387 (439)
Q Consensus       309 a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~-~~~~~~~~Fg~G~r  387 (439)
                      |||+|+||+||++++++|.+.+|++++||.||||+.|+++.+++||||++|+||++|+||||++. ..+..|+|||.|+|
T Consensus       319 avi~E~lRl~p~~~~~~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~pFG~G~R  398 (452)
T PLN03141        319 NVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRWQEKDMNNSSFTPFGGGQR  398 (452)
T ss_pred             HHHHHHHhccCCcCCcceeecCCeeECCEEECCCCEEEEehHhccCCchhcCCccccCcccccCCCCCCCCCCCCCCCCC
Confidence            99999999999999888999999999999999999999999999999999999999999999874 34678999999999


Q ss_pred             CCccHHHHHHHHHHHHHHHHhhCeeEecCCCCCCCccccCCCCCceEEEec
Q 036255          388 ACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEGYEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       388 ~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R  438 (439)
                      .|+|++||.+|++++++.|+++|++++.++......+..|.+++.|++++|
T Consensus       399 ~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (452)
T PLN03141        399 LCPGLDLARLEASIFLHHLVTRFRWVAEEDTIVNFPTVRMKRKLPIWVTRI  449 (452)
T ss_pred             CCChHHHHHHHHHHHHHHHHhcCeeecCCCCeeecccccCCCCceEEEEeC
Confidence            999999999999999999999999998765433446889999999999998


No 4  
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=2.4e-77  Score=568.21  Aligned_cols=430  Identities=56%  Similarity=1.014  Sum_probs=371.8

Q ss_pred             CCCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcccc
Q 036255            3 LPNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSKE   82 (439)
Q Consensus         3 ~~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~   82 (439)
                      .++.+.||||+++|++||+.+++..+++.++.+++++||++|++++++.++|+++||+.+++++.++...|+..+.....
T Consensus        31 ~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~~~~  110 (463)
T PLN02196         31 STKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPASKE  110 (463)
T ss_pred             CCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCchHHH
Confidence            34668899999999999998875578889999999999999999999999999999999999998777667554333334


Q ss_pred             cccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHHhcCCCc
Q 036255           83 RSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSIFGHLDT  162 (439)
Q Consensus        83 ~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~fG~~~~  162 (439)
                      ..+|..++++.+|+.|+++|+++++.|+++.+..+.+.+.+.+.++++.|. ++.+++.+++..+++++++.++||.+..
T Consensus       111 ~~~g~~~l~~~~g~~w~~~Rk~l~~~f~~~~l~~~~~~i~~~~~~~~~~~~-~~~v~~~~~~~~~~~~v~~~~~fG~~~~  189 (463)
T PLN02196        111 RMLGKQAIFFHQGDYHAKLRKLVLRAFMPDAIRNMVPDIESIAQESLNSWE-GTQINTYQEMKTYTFNVALLSIFGKDEV  189 (463)
T ss_pred             HHcCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHcCC-CCeEEeHHHHHHHHHHHHHHHHcCCCCc
Confidence            456656888899999999999999999999999999999999999999985 4579999999999999999999998644


Q ss_pred             hHHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHhhcccccCCCCCChHHH
Q 036255          163 GYKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKSVADTDLLASLMNYKDENGEHLTDDQI  242 (439)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~d~~~~ll~~~~~~~~~l~~~~i  242 (439)
                      ...+.+...+..+...+..++.++|....++..++++.+.+++.+.++++.++.....|+++.+++.    +..++++++
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~a~~~~~~~~~~~i~~~~~~~~~~~d~l~~ll~~----~~~l~~~ei  265 (463)
T PLN02196        190 LYREDLKRCYYILEKGYNSMPINLPGTLFHKSMKARKELAQILAKILSKRRQNGSSHNDLLGSFMGD----KEGLTDEQI  265 (463)
T ss_pred             hHHHHHHHHHHHHhcchhcccccCCCccchHHHHHHHHHHHHHHHHHHHHhhcCCCcccHHHHHHhc----CCCCCHHHH
Confidence            3344454444444444444555566555567788899999999999988876655567899988853    235899999


Q ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcc
Q 036255          243 VDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVS  322 (439)
Q Consensus       243 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~  322 (439)
                      ...++.+++||+|||+.+++|++++|++||++|+++++|++++.+..+ .++.+++++++++|||+|||+||||++|+++
T Consensus       266 ~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~-~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~  344 (463)
T PLN02196        266 ADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKE-EGESLTWEDTKKMPLTSRVIQETLRVASILS  344 (463)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhcccc-cCCCCCHHHHhcChHHHHHHHHHHhcCCCcc
Confidence            999999999999999999999999999999999999999999875422 2456899999999999999999999999999


Q ss_pred             cceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCccHHHHHHHHHHH
Q 036255          323 YTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGPKPNTFMPFGNGVHACPGSELAKLEMLVL  402 (439)
Q Consensus       323 ~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~  402 (439)
                      +..|.+.+|+.++||.|||||.|+++.+++||||++|+||++|+||||+....+..++|||.|+|.|+|+++|+.|++++
T Consensus       345 ~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~F~PeRfl~~~~~~~~lpFG~G~r~C~G~~~A~~e~~~~  424 (463)
T PLN02196        345 FTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRFEVAPKPNTFMPFGNGTHSCPGNELAKLEISVL  424 (463)
T ss_pred             ccceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCccChhhhcCCCCCCcccCcCCCCCCCchHHHHHHHHHHH
Confidence            88899999999999999999999999999999999999999999999998777789999999999999999999999999


Q ss_pred             HHHHHhhCeeEecCCCCC--CCccccCCCCCceEEEec
Q 036255          403 LHHLVNEYRWEIIGPNEG--YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       403 l~~ll~~~~~~~~~~~~~--~~~~~~p~~~~~v~~~~R  438 (439)
                      ++.|+++|++++.+++..  +..+..|+++++|++++.
T Consensus       425 la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  462 (463)
T PLN02196        425 IHHLTTKYRWSIVGTSNGIQYGPFALPQNGLPIALSRK  462 (463)
T ss_pred             HHHHHHhcEEEEcCCCCceEEcccccCCCCceEEEecC
Confidence            999999999999876444  566678999999999864


No 5  
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=2.6e-77  Score=572.99  Aligned_cols=428  Identities=33%  Similarity=0.601  Sum_probs=352.4

Q ss_pred             CCCCCCCCCCCccccccccccc----cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFS----QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRS   80 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~   80 (439)
                      +.+.||||+++|++||+++++.    ..++.++.+++++||++|++++++.++|+++||+.+++++.+++..|+..+...
T Consensus        36 ~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~  115 (490)
T PLN02500         36 RFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRS  115 (490)
T ss_pred             CCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchH
Confidence            4578999999999999876532    234567889999999999999999999999999999999988777676544433


Q ss_pred             cccccCCCccccCCchHHHHHHHHhhhcCChHHHhh-cHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHHhcC
Q 036255           81 KERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRN-SVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSIFGH  159 (439)
Q Consensus        81 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~fG~  159 (439)
                      ...++|..++++.+|+.|+++|+++++.|++..+.. +.+.+.+.+..+++.|.+++.+|+.+.+..++++++++++||.
T Consensus       116 ~~~~~g~~~~~~~~g~~wr~~Rk~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fg~  195 (490)
T PLN02500        116 IGGILGKWSMLVLVGDMHRDMRSISLNFLSHARLRTHLLKEVERHTLLVLDSWKENSTFSAQDEAKKFTFNLMAKHIMSM  195 (490)
T ss_pred             HHHHhCcccccccCCHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhCCCCCEEehHHHHHHHHHHHHHHHhCC
Confidence            334456457888899999999999999999988876 5678888888888888767789999999999999999999998


Q ss_pred             CCch-HHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---C---CCCchHHHHhhccccc
Q 036255          160 LDTG-YKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEK---S---VADTDLLASLMNYKDE  232 (439)
Q Consensus       160 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~---~---~~~~d~~~~ll~~~~~  232 (439)
                      +... ....+...+..+.......+.++|...+++..++.+.+.+++.+++++++++   .   ....|+++.+++.   
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~---  272 (490)
T PLN02500        196 DPGEEETEQLKKEYVTFMKGVVSAPLNFPGTAYRKALKSRATILKFIERKMEERIEKLKEEDESVEEDDLLGWVLKH---  272 (490)
T ss_pred             CCCchHHHHHHHHHHHHHhhhhcchhcCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCCcchHHHHHHhc---
Confidence            6432 2333334344333322222334555445677778888999999988877642   1   1246899999874   


Q ss_pred             CCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcC-CCCCCCCHhhhcCCCcHHHHH
Q 036255          233 NGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQND-GEKRGLTLAQTKNMPLTNKVI  311 (439)
Q Consensus       233 ~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~-~~~~~~~~~~l~~l~~l~a~i  311 (439)
                        ..++++++++++.++++||+|||+.+++|++++|++||++|+|+++|++++++... .++..++.+++++|||++|||
T Consensus       273 --~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avi  350 (490)
T PLN02500        273 --SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGESELNWEDYKKMEFTQCVI  350 (490)
T ss_pred             --cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHhhccccCCCCCCCHHHhccCHHHHHHH
Confidence              24899999999999999999999999999999999999999999999999875321 123458999999999999999


Q ss_pred             HHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC-----------CCCccc
Q 036255          312 MESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP-----------KPNTFM  380 (439)
Q Consensus       312 ~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~-----------~~~~~~  380 (439)
                      +||||+||++|.++|.+.+|++++||.|||||+|+++.+++||||++|+||++|+||||+++.           ++..|+
T Consensus       351 kEtlRl~P~~~~~~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~l  430 (490)
T PLN02500        351 NETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVLPVIAAVHLDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFM  430 (490)
T ss_pred             HHHHhcCCCccCeeeEeCCCceeCCEEECCCCEEEechhhcccCcccCCCccccChhhccCCCcccccccccCCCCCCCc
Confidence            999999999998889999999999999999999999999999999999999999999998631           356899


Q ss_pred             ccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-CCccccCCCCCceEEEe
Q 036255          381 PFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-YEPFPIPRNGLPAKFWK  437 (439)
Q Consensus       381 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-~~~~~~p~~~~~v~~~~  437 (439)
                      |||.|+|.|+|++||++|+++++++||++|+|++.++... ......+.++++|++++
T Consensus       431 pFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~l~~~~~~  488 (490)
T PLN02500        431 PFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQAFAFPFVDFPKGLPIRVRR  488 (490)
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcceecccccCCCCceEEEEe
Confidence            9999999999999999999999999999999999776544 22344566899999876


No 6  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2.6e-76  Score=540.47  Aligned_cols=431  Identities=20%  Similarity=0.350  Sum_probs=350.9

Q ss_pred             CCCCCCCCCCCcccccccccccc-CcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccc--cCCccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQ-NPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKP--TYPRSK   81 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~-~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~--~~~~~~   81 (439)
                      .++..|||+++|++||+..+... .+..+..+...++|+++.+..+-.+.++|+|||.+++|+.+....|.+  +....-
T Consensus        29 ~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d  108 (499)
T KOG0158|consen   29 RRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGD  108 (499)
T ss_pred             ccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCC
Confidence            56789999999999999988632 233444455555599999999999999999999999999988888877  322111


Q ss_pred             cc-ccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhcC-C---CcccHHHHHHHHHHHHHHHHH
Q 036255           82 ER-SIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWSG-G---RLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        82 ~~-~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      .. -.+..++++..|+.|+++|..+.|.||..+++++.+.+++...++++.+.. .   ..+++.+.+.+++.|+|++++
T Consensus       109 ~~~~l~~~~Lf~~~g~~WK~lR~~lsP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~~A  188 (499)
T KOG0158|consen  109 PEDPLSALNLFFLRGERWKRLRTKLSPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGSCA  188 (499)
T ss_pred             CCCcccccCchhccCchHHHHHHhhccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhHhh
Confidence            11 222367889999999999999999999999999999999999999888754 2   378999999999999999999


Q ss_pred             hcCCCchHH---HHHH----HHHHHHhhcccc---ccccCCCc-----chHHHHHHHHHHHHHHHHHHHHHhhcCCCCch
Q 036255          157 FGHLDTGYK---EILK----KNYSTLDRGYNS---FPIYLPGS-----LYATSLRARRRLDQTLSEIIKERKEKSVADTD  221 (439)
Q Consensus       157 fG~~~~~~~---~~~~----~~~~~~~~~~~~---~~~~~p~~-----~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~d  221 (439)
                      ||.+.++..   ..+.    ..+.........   ..+.+|..     .........+.+.+.+.+.++.|..++..+.|
T Consensus       189 fG~~~~s~~d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~v~~~v~~R~~~~~~r~D  268 (499)
T KOG0158|consen  189 FGLDANSLRDPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALPLRVKLFPEDVTDFFRKLVNSRVEQREKENIERND  268 (499)
T ss_pred             cccchhhhcCchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHhhhcccChHHHHHHHHHHHHHHHHHHHhcCCCCch
Confidence            998644322   1111    122221111110   00001110     01123345667777888888888666777899


Q ss_pred             HHHHhhccccc--C---CC-CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCC
Q 036255          222 LLASLMNYKDE--N---GE-HLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRG  295 (439)
Q Consensus       222 ~~~~ll~~~~~--~---~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  295 (439)
                      +++.+++.+..  .   .. .+|.++|+++++.+++||.||||+++++++|+|++||++|+|||+||++++.+.    ..
T Consensus       269 fi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf~lYeLA~~PdvQ~kLreEI~~~~~~~----~~  344 (499)
T KOG0158|consen  269 FIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSFALYELAKNPDVQDKLREEIDEVLEEK----EG  344 (499)
T ss_pred             HHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhcChHHHHHHHHHHHHHhccc----CC
Confidence            99999988642  1   12 599999999999999999999999999999999999999999999999997642    22


Q ss_pred             CCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccC-CEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC-
Q 036255          296 LTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYK-GHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG-  373 (439)
Q Consensus       296 ~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~-g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~-  373 (439)
                      +++|.+.+|+||++||+||||+||+++.+.|+|++|++++ ++.||||+.|.++.+++||||++||||++|+||||++. 
T Consensus       345 ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~~R~C~k~~~i~~~~~i~kG~~V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~  424 (499)
T KOG0158|consen  345 LTYDSLSKLKYLDMVIKETLRLYPPAPFLNRECTKDYEIPGGFVIPKGTPVMIPTYALHHDPEYWPEPEKFKPERFEEEN  424 (499)
T ss_pred             CCHHHHhCCcHHHHHHHHHHhhCCCcccccceecCceecCCCeEeCCCCEEEeecccccCCcccCCCcccCCCccCCCCc
Confidence            9999999999999999999999999999889999999999 99999999999999999999999999999999999864 


Q ss_pred             ---CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC------CCccccCCCCCceEEEecC
Q 036255          374 ---PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG------YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       374 ---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~------~~~~~~p~~~~~v~~~~R~  439 (439)
                         .++..|+|||.|||.|+|++||++|+|++|++||++|+++..+....      ...+..|++++++++++|.
T Consensus       425 ~~~~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t~~~~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  425 NKSRHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTTIIPLEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             ccccCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcccCcccCCccceeeecCCceEEEEEeCC
Confidence               47889999999999999999999999999999999999998873222      3778999999999999985


No 7  
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=1.3e-74  Score=556.91  Aligned_cols=435  Identities=34%  Similarity=0.639  Sum_probs=363.4

Q ss_pred             CCCCCCCCCCCCcccccccccc----ccCcchHHHHHHHhcCC--eEEEeecCceEEEecChHHHHHHHhhCCccccccC
Q 036255            4 PNPKLPPGSMGLPYIGETPKLF----SQNPDDFFSTRQKRYGE--IFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTY   77 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~----~~~~~~~~~~~~~~yG~--v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~   77 (439)
                      +..+.||||+++|++|+++++.    ..+++.++.+++++||+  +|++++++.+.|+++||+.+++++.+++ .|.+.+
T Consensus        39 ~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~-~f~~~~  117 (490)
T PLN02302         39 GQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDD-AFEPGW  117 (490)
T ss_pred             CCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCC-ccccCC
Confidence            4567899999999999998774    24678889999999997  7999999999999999999999998764 355443


Q ss_pred             CcccccccCCCccccCCchHHHHHHHHhhhcCC-hHHHhhcHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHH
Q 036255           78 PRSKERSIGPWALFFHQDGYHTRMRKLVQSSLT-PSMVRNSVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        78 ~~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      +.....++|..++...+|+.|+++|+++++.|+ ++.+..+.+.+++.+.++++.|.+++.+|+.+.+..++++++++++
T Consensus       118 ~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~~~~v~~~~~~~~~~~~vi~~~~  197 (490)
T PLN02302        118 PESTVELIGRKSFVGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKWSKMGEIEFLTELRKLTFKIIMYIF  197 (490)
T ss_pred             chhHHHHhccccccccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCEehHHHHHHHHHHHHHHHH
Confidence            322223566555677899999999999999995 7788889999999999999998777789999999999999999999


Q ss_pred             hcCCCchHHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC-----CCCchHHHHhhcccc
Q 036255          157 FGHLDTGYKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKS-----VADTDLLASLMNYKD  231 (439)
Q Consensus       157 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-----~~~~d~~~~ll~~~~  231 (439)
                      ||.+.......+...+..+...+..++..+|...+.+..++.+.+.+++.+.++++++..     ....|+++.+++..+
T Consensus       198 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~d~l~~ll~~~~  277 (490)
T PLN02302        198 LSSESELVMEALEREYTTLNYGVRAMAINLPGFAYHRALKARKKLVALFQSIVDERRNSRKQNISPRKKDMLDLLLDAED  277 (490)
T ss_pred             cCCCChHHHHHHHHHHHHHHHHhhhCCcCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCcCCHHHHHHhhhc
Confidence            998655444444444433333222233344554455666778889999999988876542     234789999998755


Q ss_pred             cCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHH
Q 036255          232 ENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVI  311 (439)
Q Consensus       232 ~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i  311 (439)
                      +++..+++++++..+..+++||+|||+.+++|++++|++||++|+++++|++++.+....+...++++++++||||+|||
T Consensus       278 ~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~kl~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i  357 (490)
T PLN02302        278 ENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVI  357 (490)
T ss_pred             cCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHH
Confidence            44556899999999999999999999999999999999999999999999999986432122337899999999999999


Q ss_pred             HHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC-CCCCcccccCCCccCCc
Q 036255          312 MESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG-PKPNTFMPFGNGVHACP  390 (439)
Q Consensus       312 ~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~-~~~~~~~~Fg~G~r~C~  390 (439)
                      +|+||++|+++..+|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||||++. ..+..++|||+|+|.|+
T Consensus       358 ~E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~~~~~~pFG~G~r~C~  437 (490)
T PLN02302        358 DETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDPSRWDNYTPKAGTFLPFGLGSRLCP  437 (490)
T ss_pred             HHHHHhCCCcccchhcccCCEeECCEEECCCCEEEeeHHHhcCCcccCCCccccChhhcCCCCCCCCCccCCCCCCcCCC
Confidence            99999999999888999999999999999999999999999999999999999999999964 34578999999999999


Q ss_pred             cHHHHHHHHHHHHHHHHhhCeeEecCCCCC--CCccccCCCCCceEEEecC
Q 036255          391 GSELAKLEMLVLLHHLVNEYRWEIIGPNEG--YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       391 G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~--~~~~~~p~~~~~v~~~~R~  439 (439)
                      |+++|..|+++++++|+++|++++.++...  ......|.+++++++++|.
T Consensus       438 G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  488 (490)
T PLN02302        438 GNDLAKLEISIFLHHFLLGYRLERLNPGCKVMYLPHPRPKDNCLARITKVA  488 (490)
T ss_pred             cHHHHHHHHHHHHHHHHhcCeeEEcCCCCcceeCCCCCCCCCceEEEEecc
Confidence            999999999999999999999999866433  4556899999999999884


No 8  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=4.9e-74  Score=554.74  Aligned_cols=429  Identities=19%  Similarity=0.268  Sum_probs=335.8

Q ss_pred             CCCCCCCCCCCccccccccccccCc-chHHHHHHHhcC-CeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNP-DDFFSTRQKRYG-EIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSKE   82 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~-~~~~~~~~~~yG-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~   82 (439)
                      +.+.||||+++|++||++++....+ +.++.++.++|| +||++++|+.++|+|+||+.+++++.+++..|.+++.....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~  134 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQ  134 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccch
Confidence            4578999999999999988853223 567889999999 79999999999999999999999999888778776543333


Q ss_pred             cccCCC---ccccCCchHHHHHHHHhhhc-CChHHHhhcHHHHHHHHHHHHhhh----cCCCcccHHHHHHHHHHHHHHH
Q 036255           83 RSIGPW---ALFFHQDGYHTRMRKLVQSS-LTPSMVRNSVSCIEATAMSTLDSW----SGGRLVNTFHEMKKFVFDVAVL  154 (439)
Q Consensus        83 ~~~g~~---~~~~~~g~~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~v~~~~~~~~~~~~~~~~  154 (439)
                      ..+|.+   +++..+|+.|+++|+++.+. +++.....+.+.++++++.+++.+    .+++++|+...+.+++++++++
T Consensus       135 ~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~  214 (543)
T PLN02971        135 KILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIKR  214 (543)
T ss_pred             hhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHHH
Confidence            344422   36778899999999999765 445555567677777766665554    2356899999999999999999


Q ss_pred             HHhcCCCch---------HH---HHHHHHHHHHhhccc-cccccCCCc------c-hHHHHHHHHHHHHHHHHHHHHHhh
Q 036255          155 SIFGHLDTG---------YK---EILKKNYSTLDRGYN-SFPIYLPGS------L-YATSLRARRRLDQTLSEIIKERKE  214 (439)
Q Consensus       155 ~~fG~~~~~---------~~---~~~~~~~~~~~~~~~-~~~~~~p~~------~-~~~~~~~~~~l~~~~~~~i~~~~~  214 (439)
                      ++||.+...         ..   ..+...+........ .+..++|..      . .+...++.+.+.+++.++++++.+
T Consensus       215 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  294 (543)
T PLN02971        215 LMFGTRTFSEKTEPDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDERIK  294 (543)
T ss_pred             HHhCCcccccccccccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999975311         01   111111211111111 111122321      1 123344566778888888877654


Q ss_pred             c---C--CCCchHHHHhhcccccCCC-CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhh
Q 036255          215 K---S--VADTDLLASLMNYKDENGE-HLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQ  288 (439)
Q Consensus       215 ~---~--~~~~d~~~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  288 (439)
                      .   .  ....|+++.+++..++++. .+++++|..++.++++||+|||+.+++|++++|++||++|+|+++||+++++.
T Consensus       295 ~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~EI~~v~g~  374 (543)
T PLN02971        295 MWREGKRTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGK  374 (543)
T ss_pred             HHhccCCCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence            2   1  1246999999986443322 49999999999999999999999999999999999999999999999999853


Q ss_pred             cCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCC
Q 036255          289 NDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNP  367 (439)
Q Consensus       289 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P  367 (439)
                          ++.++++++++|||++|||+|+||+||++|. ++|.+.+|++++||.|||||.|++++|++||||++|+||++|+|
T Consensus       375 ----~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~dP~~F~P  450 (543)
T PLN02971        375 ----ERFVQESDIPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKP  450 (543)
T ss_pred             ----CCCCCHHHhccCHHHHHHHHHHHhcCCCcccCcceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCCccccCc
Confidence                4678999999999999999999999999997 57999999999999999999999999999999999999999999


Q ss_pred             CCCCCC-------CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC------CCccccCCCCCceE
Q 036255          368 SRFEIG-------PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG------YEPFPIPRNGLPAK  434 (439)
Q Consensus       368 ~R~~~~-------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~------~~~~~~p~~~~~v~  434 (439)
                      |||+++       ..+..|+|||.|+|.|+|++||+.|+++++++||++|+|++.++...      .. ...-+.++.+.
T Consensus       451 eRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  529 (543)
T PLN02971        451 ERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLSKPLVMV  529 (543)
T ss_pred             ccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-cccccccceee
Confidence            999863       23568999999999999999999999999999999999998765422      33 33233478888


Q ss_pred             EEec
Q 036255          435 FWKL  438 (439)
Q Consensus       435 ~~~R  438 (439)
                      +++|
T Consensus       530 ~~~~  533 (543)
T PLN02971        530 GELR  533 (543)
T ss_pred             eeec
Confidence            8887


No 9  
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=6.2e-74  Score=553.67  Aligned_cols=428  Identities=22%  Similarity=0.302  Sum_probs=344.7

Q ss_pred             CCCCCCCCCCccccccccccc------------------cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHh
Q 036255            6 PKLPPGSMGLPYIGETPKLFS------------------QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLV   67 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~------------------~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~   67 (439)
                      ++.||||+++|++||++++..                  .+....+.+++++||++|++++++.++|+++||+.+++++.
T Consensus        41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~  120 (516)
T PLN02290         41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT  120 (516)
T ss_pred             HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence            457999999999999987731                  12223467889999999999999999999999999999998


Q ss_pred             hCCccccccCCc--ccccccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhc----CC-CcccH
Q 036255           68 THAHLFKPTYPR--SKERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWS----GG-RLVNT  140 (439)
Q Consensus        68 ~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~-~~v~~  140 (439)
                      ++...+...+..  .....+| .++++.+|+.|+++|+++.+.|+.+.+..+.+.+.+.++++++.|.    .+ ..+|+
T Consensus       121 ~~~~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~vd~  199 (516)
T PLN02290        121 KYNTVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAAPAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEI  199 (516)
T ss_pred             cCCCCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEh
Confidence            764433332221  1223456 6888899999999999999999999999999999999999988874    23 47999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCchHH--HHHHHHHHHHhh-cc--ccccc--cCCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 036255          141 FHEMKKFVFDVAVLSIFGHLDTGYK--EILKKNYSTLDR-GY--NSFPI--YLPGSLYATSLRARRRLDQTLSEIIKERK  213 (439)
Q Consensus       141 ~~~~~~~~~~~~~~~~fG~~~~~~~--~~~~~~~~~~~~-~~--~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~  213 (439)
                      .+.+..++++++++++||.+.....  ......+..... ..  ..++.  ++|....++..+..+.+.+++.+.+++++
T Consensus       200 ~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~  279 (516)
T PLN02290        200 GEYMTRLTADIISRTEFDSSYEKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGEVERLLMEIIQSRR  279 (516)
T ss_pred             HHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHHhhhhhcCchhhhCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998643211  111111111111 10  11121  23332233445567788888888888776


Q ss_pred             hc---C---CCCchHHHHhhccccc---CCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHH
Q 036255          214 EK---S---VADTDLLASLMNYKDE---NGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKL  284 (439)
Q Consensus       214 ~~---~---~~~~d~~~~ll~~~~~---~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~  284 (439)
                      +.   .   ....|+++.+++..+.   ++..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|+++
T Consensus       280 ~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~tl~~~l~~L~~~P~vq~kl~~Ei~~  359 (516)
T PLN02290        280 DCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAE  359 (516)
T ss_pred             HHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            43   1   1246899999875332   2234789999999999999999999999999999999999999999999999


Q ss_pred             HHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCC-CCCC
Q 036255          285 IYEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFF-SEPR  363 (439)
Q Consensus       285 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~  363 (439)
                      +++.     ..++.+++++||||+|||+||||++||++.++|.+.+|++++||.|||||.|.++.+++||||++| +||+
T Consensus       360 v~~~-----~~~~~~~l~~lpYl~avi~EtlRl~p~~~~~~R~~~~d~~i~g~~IP~Gt~V~~~~~~~~rdp~~~~~dP~  434 (516)
T PLN02290        360 VCGG-----ETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLAIHHSEELWGKDAN  434 (516)
T ss_pred             HhCC-----CCCCHHHHhcChHHHHHHHHHHHcCCCccccceeecCCeeECCEEECCCCEEEecHHHhcCChhhhCCChh
Confidence            9852     368999999999999999999999999998889999999999999999999999999999999999 8999


Q ss_pred             CCCCCCCCCC--CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCCCCCceEEEec
Q 036255          364 EFNPSRFEIG--PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       364 ~F~P~R~~~~--~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~~~~~v~~~~R  438 (439)
                      +|+||||++.  .....|+|||.|+|.|+|+++|++|++++++.||++|++++.++...   ...+..|+++++|++++|
T Consensus       435 ~F~PeRfl~~~~~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  514 (516)
T PLN02290        435 EFNPDRFAGRPFAPGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPL  514 (516)
T ss_pred             hcCccccCCCCCCCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCCCcccCccceeeecCCCCCeEEEEeC
Confidence            9999999964  23467999999999999999999999999999999999998766322   457889999999999998


Q ss_pred             C
Q 036255          439 R  439 (439)
Q Consensus       439 ~  439 (439)
                      .
T Consensus       515 ~  515 (516)
T PLN02290        515 N  515 (516)
T ss_pred             C
Confidence            4


No 10 
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=2e-73  Score=545.88  Aligned_cols=426  Identities=19%  Similarity=0.288  Sum_probs=342.2

Q ss_pred             CCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-c-ccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-R-SKE   82 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~-~~~   82 (439)
                      +.+.+|||+++|++||+.++. .+++.++.+++++||+||++++++.++|+++||+.+++++.++...|..+.. . ...
T Consensus        27 ~~~~~pgp~~~p~~G~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~~  105 (482)
T PTZ00404         27 HKNELKGPIPIPILGNLHQLG-NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIKH  105 (482)
T ss_pred             cCCCCCCCCCCCeeccHhhhc-ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceeee
Confidence            467789999999999998884 6788999999999999999999999999999999999999876555544322 1 112


Q ss_pred             cccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHHHhc
Q 036255           83 RSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLSIFG  158 (439)
Q Consensus        83 ~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~~fG  158 (439)
                      ..+| .++++.+|+.|+++|+++.+.|+++.+.++.+.+.+.+.++++.|.    +++.+|+.+.+..+++++++.++||
T Consensus       106 ~~~~-~~l~~~~g~~w~~~Rk~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG  184 (482)
T PTZ00404        106 GTFY-HGIVTSSGEYWKRNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKYIFN  184 (482)
T ss_pred             eccC-CceeccChHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHhc
Confidence            2235 7888899999999999999999999999999999999999988763    3567999999999999999999999


Q ss_pred             CCCch-------HHHHHHHHHHHHhhccc------cccccCCCc--chHHHHHHHHHHHHHHHHHHHHHhhc--CCCCch
Q 036255          159 HLDTG-------YKEILKKNYSTLDRGYN------SFPIYLPGS--LYATSLRARRRLDQTLSEIIKERKEK--SVADTD  221 (439)
Q Consensus       159 ~~~~~-------~~~~~~~~~~~~~~~~~------~~~~~~p~~--~~~~~~~~~~~l~~~~~~~i~~~~~~--~~~~~d  221 (439)
                      .+...       ....+......+.....      .++...|..  ......++.+.+.+++.+.++++++.  .....|
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~d  264 (482)
T PTZ00404        185 EDISFDEDIHNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVPRD  264 (482)
T ss_pred             cccccccccchhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCccc
Confidence            75321       11233333333222111      011111110  11223345667777777777766553  223568


Q ss_pred             HHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhh
Q 036255          222 LLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQT  301 (439)
Q Consensus       222 ~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l  301 (439)
                      +++.++++..+. .....+++++++..+++||+|||+.+++|++++|++||++|+|+++|++++++.    ...++++++
T Consensus       265 ll~~ll~~~~~~-~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~v~~~----~~~~~~~~l  339 (482)
T PTZ00404        265 LLDLLIKEYGTN-TDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNG----RNKVLLSDR  339 (482)
T ss_pred             HHHHHHHHhccC-CcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHhcC----CCCCCcccc
Confidence            999999764221 112234588999999999999999999999999999999999999999999863    345788999


Q ss_pred             cCCCcHHHHHHHHhcCCCCccc-ceeeecccccc-CCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 036255          302 KNMPLTNKVIMESLRMASVVSY-TFREAVEDVEY-KGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGPKPNTF  379 (439)
Q Consensus       302 ~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~-~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~  379 (439)
                      ++||||+|||+||||+|||+|. ++|.+.+|+++ +||.|||||.|.++.+++||||++|+||++|+||||++...+..|
T Consensus       340 ~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F~PeRwl~~~~~~~~  419 (482)
T PTZ00404        340 QSTPYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQFDPSRFLNPDSNDAF  419 (482)
T ss_pred             ccChHHHHHHHHHHHhcCCcccccceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCccccCccccCCCCCCCce
Confidence            9999999999999999999996 57999999999 999999999999999999999999999999999999987778899


Q ss_pred             cccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-----CCccccCCCCCceEEEec
Q 036255          380 MPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-----YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       380 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-----~~~~~~p~~~~~v~~~~R  438 (439)
                      +|||.|+|.|+|++||++|+++++++|+++|++++.++.+.     ...+.. +.+++|++++|
T Consensus       420 ~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~R  482 (482)
T PTZ00404        420 MPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLLEKR  482 (482)
T ss_pred             eccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeeeecC
Confidence            99999999999999999999999999999999998755322     234444 46799999987


No 11 
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=5.5e-73  Score=545.66  Aligned_cols=408  Identities=24%  Similarity=0.368  Sum_probs=330.8

Q ss_pred             CCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCc-cccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPR-SKER   83 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~~~   83 (439)
                      +.+.||||+++|++|+++++ ....+.++.+++++||++|++++++.++|+++||+.+++++.++...|+.+... ....
T Consensus        34 ~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~  112 (516)
T PLN02183         34 RLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAISY  112 (516)
T ss_pred             CCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchhc
Confidence            45789999999999999877 345667889999999999999999999999999999999998877666654331 1222


Q ss_pred             ccC--CCccccCCchHHHHHHHH-hhhcCChHHHhhcHHHHHHHHHHHHhhhc--CCCcccHHHHHHHHHHHHHHHHHhc
Q 036255           84 SIG--PWALFFHQDGYHTRMRKL-VQSSLTPSMVRNSVSCIEATAMSTLDSWS--GGRLVNTFHEMKKFVFDVAVLSIFG  158 (439)
Q Consensus        84 ~~g--~~~~~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~fG  158 (439)
                      ..+  ..+++..+|+.|+++|++ +++.|+.+.+..+.+. .++++.+++.|.  .++++|+.+.+..++++++++++||
T Consensus       113 ~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~-~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~fG  191 (516)
T PLN02183        113 LTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASV-RDEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAAFG  191 (516)
T ss_pred             cccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHH-HHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHhhc
Confidence            222  356777899999999998 5789999888888775 457888888873  3678999999999999999999999


Q ss_pred             CCCchHHHHHHHHHHHHhhccc------ccccc--C-CCcchHHHHHHHHHHHHHHHHHHHHHhhc---C-------CCC
Q 036255          159 HLDTGYKEILKKNYSTLDRGYN------SFPIY--L-PGSLYATSLRARRRLDQTLSEIIKERKEK---S-------VAD  219 (439)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~---~-------~~~  219 (439)
                      .+.+.....+.+.+..+...+.      .+|+.  + +...+++..++.+.+.+++.++++++.++   .       ...
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  271 (516)
T PLN02183        192 SSSNEGQDEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKNQNADNDSEEAE  271 (516)
T ss_pred             CcccchHHHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Confidence            8644333344444443322111      12211  1 21223456667777888888777765431   1       123


Q ss_pred             chHHHHhhccccc-----------CCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhh
Q 036255          220 TDLLASLMNYKDE-----------NGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQ  288 (439)
Q Consensus       220 ~d~~~~ll~~~~~-----------~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~  288 (439)
                      .|+++.+++...+           .+..++++++...+.++++||+|||+.+++|++++|++||++|+|+++|++++++.
T Consensus       272 ~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pevq~kl~~Ei~~v~~~  351 (516)
T PLN02183        272 TDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGL  351 (516)
T ss_pred             ccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC
Confidence            5899999874321           12358999999999999999999999999999999999999999999999999852


Q ss_pred             cCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCC
Q 036255          289 NDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPS  368 (439)
Q Consensus       289 ~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  368 (439)
                          ++.++.+++++||||+|||+||||++||+|+..|++.+|++++||.|||||+|.++.+++||||++|+||++|+||
T Consensus       352 ----~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~~~~~dP~~F~Pe  427 (516)
T PLN02183        352 ----NRRVEESDLEKLTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPDTFKPS  427 (516)
T ss_pred             ----CCCCCHHHhccChHHHHHHHHHhccCCCccceeeeccCceeECCEEECCCCEEEEehhhhcCCccccCCccccCch
Confidence                3468999999999999999999999999998889999999999999999999999999999999999999999999


Q ss_pred             CCCCCC------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCC
Q 036255          369 RFEIGP------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPN  418 (439)
Q Consensus       369 R~~~~~------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~  418 (439)
                      ||+.+.      ++..|+|||.|+|+|+|++||++|+++++++|+++|++++.++.
T Consensus       428 Rfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~  483 (516)
T PLN02183        428 RFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGM  483 (516)
T ss_pred             hhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCC
Confidence            998631      34579999999999999999999999999999999999987653


No 12 
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=1e-72  Score=543.96  Aligned_cols=429  Identities=22%  Similarity=0.307  Sum_probs=348.8

Q ss_pred             CCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcc-ccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRS-KER   83 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~-~~~   83 (439)
                      ..+.||||.++|++||++++. .+++.++.++.++||+||++++++.++++++||+.+++++.++...|.++.... ...
T Consensus        32 ~~~~pPgp~~~P~iG~~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~  110 (517)
T PLN02687         32 KRPLPPGPRGWPVLGNLPQLG-PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEH  110 (517)
T ss_pred             CCCCCccCCCCCccccHHhcC-CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhh
Confidence            346799999999999998884 678899999999999999999999999999999999999988766677654321 112


Q ss_pred             c--cCCCccccCCchHHHHHHHHhh-hcCChHHHhhcHHHHHHHHHHHHhhhc---CCCcccHHHHHHHHHHHHHHHHHh
Q 036255           84 S--IGPWALFFHQDGYHTRMRKLVQ-SSLTPSMVRNSVSCIEATAMSTLDSWS---GGRLVNTFHEMKKFVFDVAVLSIF  157 (439)
Q Consensus        84 ~--~g~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~f  157 (439)
                      +  .|.++++..+|+.|+++|+++. +.|+.+.+..+.+.+.+.+.++++.|.   +++++|+.+.+..+++++++..+|
T Consensus       111 ~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~f  190 (517)
T PLN02687        111 MAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMV  190 (517)
T ss_pred             hccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHh
Confidence            2  1234566678999999999998 789999999999999999999988874   356899999999999999999999


Q ss_pred             cCCCc-----hHHHHHHHHHHHHhhccc------cccc--cCCCc-chHHHHHHHHHHHHHHHHHHHHHhhcC----CCC
Q 036255          158 GHLDT-----GYKEILKKNYSTLDRGYN------SFPI--YLPGS-LYATSLRARRRLDQTLSEIIKERKEKS----VAD  219 (439)
Q Consensus       158 G~~~~-----~~~~~~~~~~~~~~~~~~------~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~----~~~  219 (439)
                      |.+..     .....+.+.+..+.....      .+|.  +++.. ...+..++.+.+.+++.++++++++..    ...
T Consensus       191 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~  270 (517)
T PLN02687        191 GRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGSEEH  270 (517)
T ss_pred             CccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Confidence            97521     222334444333322111      1221  12211 134555677888889999998887642    234


Q ss_pred             chHHHHhhccccc-----CCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCC
Q 036255          220 TDLLASLMNYKDE-----NGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKR  294 (439)
Q Consensus       220 ~d~~~~ll~~~~~-----~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~  294 (439)
                      .|+++.+++..++     ++..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++++.    ++
T Consensus       271 ~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~~  346 (517)
T PLN02687        271 KDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEELDAVVGR----DR  346 (517)
T ss_pred             ccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCC----CC
Confidence            6999999976432     23469999999999999999999999999999999999999999999999999753    45


Q ss_pred             CCCHhhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC
Q 036255          295 GLTLAQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG  373 (439)
Q Consensus       295 ~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~  373 (439)
                      .++.+++++||||+|||+||||++||++. ++|.+.+|++++||.||+||.|.++.+++||||++|+||++|+||||++.
T Consensus       347 ~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h~d~~~~~dp~~F~PeRfl~~  426 (517)
T PLN02687        347 LVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECEINGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPG  426 (517)
T ss_pred             CCCHHHhhhCHHHHHHHHHHHccCCCccccccccCCCCeeECCEEECCCCEEEEecHHhcCCcccCCCcccCCchhcCCC
Confidence            68999999999999999999999999996 67999999999999999999999999999999999999999999999863


Q ss_pred             C---------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC--C------CCccccCCCCCceEEE
Q 036255          374 P---------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE--G------YEPFPIPRNGLPAKFW  436 (439)
Q Consensus       374 ~---------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~--~------~~~~~~p~~~~~v~~~  436 (439)
                      .         .+..|+|||.|+|.|+|++||++|+++++++||++|++++.++..  .      ......+..++.++++
T Consensus       427 ~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  506 (517)
T PLN02687        427 GEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLNMEEAYGLTLQRAVPLMVHPR  506 (517)
T ss_pred             CCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCCcccccceeeecCCCeEEeec
Confidence            1         245799999999999999999999999999999999999876532  1      2334445567888877


Q ss_pred             ec
Q 036255          437 KL  438 (439)
Q Consensus       437 ~R  438 (439)
                      +|
T Consensus       507 ~R  508 (517)
T PLN02687        507 PR  508 (517)
T ss_pred             cC
Confidence            77


No 13 
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=1.2e-72  Score=540.17  Aligned_cols=431  Identities=21%  Similarity=0.295  Sum_probs=348.7

Q ss_pred             CCCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcc--
Q 036255            3 LPNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRS--   80 (439)
Q Consensus         3 ~~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~--   80 (439)
                      ....+.||||+++|++||++.+ ..+++.++.+++++||+||++++++.++|+++||+.+++++.+....|..+....  
T Consensus        27 ~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         27 KPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             cccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            4567889999999999999877 4667889999999999999999999999999999999999987776676654311  


Q ss_pred             cccccC-CCccccCCchHHHHHHHHhhh-cCChHHHhhcHHHHHHHHHHHHhhh----cCCCcccHHHHHHHHHHHHHHH
Q 036255           81 KERSIG-PWALFFHQDGYHTRMRKLVQS-SLTPSMVRNSVSCIEATAMSTLDSW----SGGRLVNTFHEMKKFVFDVAVL  154 (439)
Q Consensus        81 ~~~~~g-~~~~~~~~g~~~~~~R~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~v~~~~~~~~~~~~~~~~  154 (439)
                      .....| .+++++.+|+.|+++|+++++ .|+++.+..+.+.+.+.+.++++.+    .+++++++.+.+..+++++++.
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            112233 356777889999999999985 7999999988888888877776655    3467899999999999999999


Q ss_pred             HHhcCCC----chHHHHHHHHHHHHhhcc------ccccc--cCCCc-chHHHHHHHHHHHHHHHHHHHHHhhcC---CC
Q 036255          155 SIFGHLD----TGYKEILKKNYSTLDRGY------NSFPI--YLPGS-LYATSLRARRRLDQTLSEIIKERKEKS---VA  218 (439)
Q Consensus       155 ~~fG~~~----~~~~~~~~~~~~~~~~~~------~~~~~--~~p~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~---~~  218 (439)
                      ++||.+.    ......+...+.......      ..+|.  +++.. ..++..+..+.+.+++.+.++++.+..   ..
T Consensus       186 ~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  265 (504)
T PLN00110        186 VILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTASAHERKG  265 (504)
T ss_pred             HHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence            9999753    112233444443332211      11221  12211 123344567778888888888776532   22


Q ss_pred             CchHHHHhhccccc-CCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 036255          219 DTDLLASLMNYKDE-NGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLT  297 (439)
Q Consensus       219 ~~d~~~~ll~~~~~-~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  297 (439)
                      ..|+++.+++..+. ++..++++++..++..+++||+|||+.+++|++++|++||++|+++++|++++++.    ++.++
T Consensus       266 ~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~----~~~~~  341 (504)
T PLN00110        266 NPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR----NRRLV  341 (504)
T ss_pred             CCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCC
Confidence            46899999976432 34469999999999999999999999999999999999999999999999999753    35689


Q ss_pred             HhhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC--
Q 036255          298 LAQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP--  374 (439)
Q Consensus       298 ~~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~--  374 (439)
                      .+++++||||+|||+||||++|++++ ++|.+.+|++++||.|||||.|.++.+++||||++|+||++|+||||+++.  
T Consensus       342 ~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~  421 (504)
T PLN00110        342 ESDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEFRPERFLSEKNA  421 (504)
T ss_pred             HHHhhcChHHHHHHHHHhcCCCCcccccccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccCCcccccCCCCc
Confidence            99999999999999999999999997 679999999999999999999999999999999999999999999998631  


Q ss_pred             ------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-----CCccccCCCCCceEEEec
Q 036255          375 ------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-----YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       375 ------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-----~~~~~~p~~~~~v~~~~R  438 (439)
                            ....|+|||.|+|.|+|++||+.|+++++++|+++|++++.++...     ...+..|+.++.+++++|
T Consensus       422 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  496 (504)
T PLN00110        422 KIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLSAMVTPR  496 (504)
T ss_pred             ccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCceEeeccC
Confidence                  1247999999999999999999999999999999999998765432     345667889999999988


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=2.1e-74  Score=547.61  Aligned_cols=427  Identities=29%  Similarity=0.445  Sum_probs=345.5

Q ss_pred             CCCCCCCCCCcccccccccccc--CcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccc--cccCCccc
Q 036255            6 PKLPPGSMGLPYIGETPKLFSQ--NPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLF--KPTYPRSK   81 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~~--~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~--~~~~~~~~   81 (439)
                      ...||||++||++|++.++...  +...++.++..+||++|+.|++|.+.++++||+.+++|+.++....  ...+...+
T Consensus        34 ~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~  113 (497)
T KOG0157|consen   34 KKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL  113 (497)
T ss_pred             hccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence            4578999999999999998633  4556788889999999999999999999999999999996444333  33344578


Q ss_pred             ccccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhc--C-CCcccHHHHHHHHHHHHHHHHHhc
Q 036255           82 ERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWS--G-GRLVNTFHEMKKFVFDVAVLSIFG  158 (439)
Q Consensus        82 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~-~~~v~~~~~~~~~~~~~~~~~~fG  158 (439)
                      ..++| .|+++.+|+.|.++|+++.++|+.+.+..+...+.+....++..+.  . ++.+|+.+.++++++|++|.+++|
T Consensus       114 ~~~lG-~gll~~~g~~W~~~Rk~~~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~~~~G  192 (497)
T KOG0157|consen  114 KPWLG-DGLLFSDGEKWHKHRKLLTPAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICKTAMG  192 (497)
T ss_pred             HHHhc-CccccCCchHHHHHHhhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHHHhcC
Confidence            89999 5899988999999999999999999999988888777766555432  2 333999999999999999999999


Q ss_pred             CCC-chH---HHHHHHHHHHHhh----ccccc---cccCCCcchHHHHHHHHHHHHHHHHHHHHHhhc----C----CCC
Q 036255          159 HLD-TGY---KEILKKNYSTLDR----GYNSF---PIYLPGSLYATSLRARRRLDQTLSEIIKERKEK----S----VAD  219 (439)
Q Consensus       159 ~~~-~~~---~~~~~~~~~~~~~----~~~~~---~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~----~----~~~  219 (439)
                      ... ...   ......++..+..    .+...   .++......++..++.+.+++.++++|++++++    .    ...
T Consensus       193 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~~~~~~~~~~~~~  272 (497)
T KOG0157|consen  193 PESLDAEGPELFEYVQAFDDLTELISKRINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREELEKEGSGEEKKR  272 (497)
T ss_pred             CccccccCCcccHHHHHHHHHHHHHHHHHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchh
Confidence            322 111   1122222222221    11111   111111134566778999999999999988853    1    224


Q ss_pred             chHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHh
Q 036255          220 TDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLA  299 (439)
Q Consensus       220 ~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~  299 (439)
                      .|+++.+....+   ..+++++|.+++.++++||+||||++++|+++.|+.||++|+++++|+++++++..   ...+..
T Consensus       273 ~d~L~~~~~~~~---~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~~i~~~~~---~~~~~~  346 (497)
T KOG0157|consen  273 LDFLDTLLLEED---KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVDEILGNRD---DKWEVE  346 (497)
T ss_pred             hhHHHHHHHhcc---CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhCCCC---CCCChh
Confidence            577775332212   56999999999999999999999999999999999999999999999999987532   123333


Q ss_pred             hhcCCCcHHHHHHHHhcCCCCcccceeeeccccccC-CEEeCCCCEEEeccccccCCCCCCC-CCCCCCCCCCCCC----
Q 036255          300 QTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYK-GHLIPKGWKVLPLFRNVHHNPDFFS-EPREFNPSRFEIG----  373 (439)
Q Consensus       300 ~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~-g~~Ip~G~~v~~~~~~~~~d~~~~~-~p~~F~P~R~~~~----  373 (439)
                      ..++|+||++||+||||||||+|++.|.+.+|++++ ||.||||+.|.++++++|||+.+|+ ||++|+||||+.+    
T Consensus       347 ~~~~m~yl~~vi~EsLRLyppvp~~~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp~~F~PeRf~~~~~~~  426 (497)
T KOG0157|consen  347 KLDQMKYLEMVIKESLRLYPPVPLVARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDPEEFDPERFLDGEEKA  426 (497)
T ss_pred             hhhhhHHHHHHHHHHhccCCCCchhhcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCChhhcCccccCCCCCcC
Confidence            333799999999999999999999999999999995 8999999999999999999999995 9999999999953    


Q ss_pred             -CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCC-CC--CCccccCCCCCceEEEecC
Q 036255          374 -PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPN-EG--YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       374 -~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~-~~--~~~~~~p~~~~~v~~~~R~  439 (439)
                       .++++|+|||+|+|.|+|++||++|||+++++||++|+|++..+. ..  ...+.+|+.+++|++++|.
T Consensus       427 ~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~v~~~~r~  496 (497)
T KOG0157|consen  427 KRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDKPKPVPELTLRPKNGLKVKLRPRG  496 (497)
T ss_pred             CCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCCceeeeEEEEEecCCeEEEEEeCC
Confidence             347899999999999999999999999999999999999998875 33  8899999999999999984


No 15 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=2.4e-72  Score=541.61  Aligned_cols=433  Identities=22%  Similarity=0.316  Sum_probs=345.9

Q ss_pred             CCCCCCCCCCCCcccccccccc--ccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCccc
Q 036255            4 PNPKLPPGSMGLPYIGETPKLF--SQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSK   81 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~--~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~   81 (439)
                      +..+.||||+++|++||++.+.  ..+++.++.+++++||++|++++++.++|+++||+.+++++.++...|+.+.....
T Consensus        32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~  111 (519)
T PLN00168         32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS  111 (519)
T ss_pred             CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence            3557899999999999997653  13467788999999999999999999999999999999999887777766543222


Q ss_pred             ccccCC-Ccccc--CCchHHHHHHH-HhhhcCChHHHhhcHHHHHHHHHHHHhhhcC----CCcccHHHHHHHHHHHHHH
Q 036255           82 ERSIGP-WALFF--HQDGYHTRMRK-LVQSSLTPSMVRNSVSCIEATAMSTLDSWSG----GRLVNTFHEMKKFVFDVAV  153 (439)
Q Consensus        82 ~~~~g~-~~~~~--~~g~~~~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~~~~~~  153 (439)
                      ..++|. .+++.  .+|+.|+++|+ ++.+.|+++.+.++.+.+.+.++.+++.|.+    ++.+|+.+.+..++.++++
T Consensus       112 ~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii~  191 (519)
T PLN00168        112 SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLLV  191 (519)
T ss_pred             hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHH
Confidence            233442 23433  68999999876 7899999999999999999999988888743    3468899999999999999


Q ss_pred             HHHhcCCCchH-HHHHHHHHHHHh---hcc----ccccccC---CCcchHHHHHHHHHHHHHHHHHHHHHhhcC------
Q 036255          154 LSIFGHLDTGY-KEILKKNYSTLD---RGY----NSFPIYL---PGSLYATSLRARRRLDQTLSEIIKERKEKS------  216 (439)
Q Consensus       154 ~~~fG~~~~~~-~~~~~~~~~~~~---~~~----~~~~~~~---p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~------  216 (439)
                      .++||.+.+.. ...+...+..+.   ...    ..+|.+.   ....+.+..++.+++.+++.++++++++..      
T Consensus       192 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  271 (519)
T PLN00168        192 LMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQG  271 (519)
T ss_pred             HHHcCCCcChhhHHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            99999864322 222322222211   111    1122111   111133445677788888888888765421      


Q ss_pred             C--------CCchHHHHhhcccc--cCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Q 036255          217 V--------ADTDLLASLMNYKD--ENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIY  286 (439)
Q Consensus       217 ~--------~~~d~~~~ll~~~~--~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  286 (439)
                      .        ...|+++.+++...  +++..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|+++++
T Consensus       272 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q~kl~~Ei~~v~  351 (519)
T PLN00168        272 GEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKT  351 (519)
T ss_pred             CccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Confidence            0        13589999987542  2234699999999999999999999999999999999999999999999999998


Q ss_pred             hhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccc-eeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCC
Q 036255          287 EQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYT-FREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREF  365 (439)
Q Consensus       287 ~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F  365 (439)
                      +.   ....++.+++++||||+|||+||||+||++++. +|.+.+|++++||.|||||.|.++.+++||||++|+||++|
T Consensus       352 ~~---~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~~~~~~p~~F  428 (519)
T PLN00168        352 GD---DQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEF  428 (519)
T ss_pred             CC---CCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccCCccCCCCccCCCEEECCCCEEEEChHHHhcCccccCCcccc
Confidence            53   235689999999999999999999999999875 69999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC----------CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-----CCccccCCCC
Q 036255          366 NPSRFEIG----------PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-----YEPFPIPRNG  430 (439)
Q Consensus       366 ~P~R~~~~----------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-----~~~~~~p~~~  430 (439)
                      +||||+..          .++..|+|||.|+|+|+|++||++|+++++++||++|+|++.++...     ...+..++++
T Consensus       429 ~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  508 (519)
T PLN00168        429 VPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKREFTTVMAKP  508 (519)
T ss_pred             CcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhceeEEeecCC
Confidence            99999853          12457999999999999999999999999999999999998765332     2346677889


Q ss_pred             CceEEEecC
Q 036255          431 LPAKFWKLR  439 (439)
Q Consensus       431 ~~v~~~~R~  439 (439)
                      ++|++++|+
T Consensus       509 ~~~~~~~R~  517 (519)
T PLN00168        509 LRARLVPRR  517 (519)
T ss_pred             cEEEEEecc
Confidence            999999985


No 16 
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.1e-72  Score=541.16  Aligned_cols=431  Identities=22%  Similarity=0.309  Sum_probs=345.7

Q ss_pred             CCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCc-ccc
Q 036255            4 PNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPR-SKE   82 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~-~~~   82 (439)
                      ++.+.||||+++|++||+.++...++..++.+++++||++|++++++.++|+++||+.+++++.++...|..+... ...
T Consensus        25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~  104 (499)
T PLN03234         25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ  104 (499)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence            4567899999999999998885346888999999999999999999999999999999999998877666654321 111


Q ss_pred             --cccCCCccccCCchHHHHHHHHh-hhcCChHHHhhcHHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHH
Q 036255           83 --RSIGPWALFFHQDGYHTRMRKLV-QSSLTPSMVRNSVSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLS  155 (439)
Q Consensus        83 --~~~g~~~~~~~~g~~~~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~  155 (439)
                        ...|....+...++.|+++|+.+ .+.|+++.+..+.+.+++.++++++.|.    +++.+|+.+.+..+++++++.+
T Consensus       105 ~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~~  184 (499)
T PLN03234        105 TMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCRQ  184 (499)
T ss_pred             hhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHHH
Confidence              11221212345678999999985 6899999999999999999999998873    4678999999999999999999


Q ss_pred             HhcCCCchH---HHHHHHHHHHHhhccc--c----cccc--CC--CcchHHHHHHHHHHHHHHHHHHHHHhhc---CCCC
Q 036255          156 IFGHLDTGY---KEILKKNYSTLDRGYN--S----FPIY--LP--GSLYATSLRARRRLDQTLSEIIKERKEK---SVAD  219 (439)
Q Consensus       156 ~fG~~~~~~---~~~~~~~~~~~~~~~~--~----~~~~--~p--~~~~~~~~~~~~~l~~~~~~~i~~~~~~---~~~~  219 (439)
                      +||.+....   ...+.+.+........  .    +|++  ++  ....++..++.+.+.+++.++++++.+.   ....
T Consensus       185 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  264 (499)
T PLN03234        185 AFGKRYNEYGTEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDPNRPKQET  264 (499)
T ss_pred             HhCCcccccchhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCc
Confidence            999864332   2233333322221111  1    1111  10  0113466788889999999999887643   1234


Q ss_pred             chHHHHhhcccccC--CCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 036255          220 TDLLASLMNYKDEN--GEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLT  297 (439)
Q Consensus       220 ~d~~~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  297 (439)
                      .|+++.+++..+++  +..+++++|..++.++++||+|||+.+++|++++|++||++|+++++|++++++.    ...++
T Consensus       265 ~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~Ei~~~~~~----~~~~~  340 (499)
T PLN03234        265 ESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGD----KGYVS  340 (499)
T ss_pred             ccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC----CCCCC
Confidence            68888888654332  2358999999999999999999999999999999999999999999999999753    35689


Q ss_pred             HhhhcCCCcHHHHHHHHhcCCCCcccc-eeeeccccccCCEEeCCCCEEEeccccccCCCCCC-CCCCCCCCCCCCCCC-
Q 036255          298 LAQTKNMPLTNKVIMESLRMASVVSYT-FREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFF-SEPREFNPSRFEIGP-  374 (439)
Q Consensus       298 ~~~l~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~-  374 (439)
                      ++++++|||++|||+|+||++||+++. +|.+.+|++++||.|||||.|.++.+++||||++| +||++|+||||+++. 
T Consensus       341 ~~~l~~l~yl~avi~E~lRl~p~~~~~~~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P~~F~PeR~l~~~~  420 (499)
T PLN03234        341 EEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNPNEFIPERFMKEHK  420 (499)
T ss_pred             HHHHhcChHHHHHHHHHhccCCCccccCCcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCChhhcCchhhcCCCC
Confidence            999999999999999999999999975 69999999999999999999999999999999999 899999999998642 


Q ss_pred             ------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC-C-------CCccccCCCCCceEEEec
Q 036255          375 ------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE-G-------YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       375 ------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~-~-------~~~~~~p~~~~~v~~~~R  438 (439)
                            .+..|+|||.|+|+|+|+++|++|++++++.|+++|++++.++.. .       ++....|++.+.+.+++|
T Consensus       421 ~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  498 (499)
T PLN03234        421 GVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHKKEHLVLAPTKH  498 (499)
T ss_pred             CcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCcccccccccccCCCeEEEeecC
Confidence                  356799999999999999999999999999999999999987531 1       345556777777777766


No 17 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=2.2e-72  Score=532.27  Aligned_cols=427  Identities=32%  Similarity=0.601  Sum_probs=348.7

Q ss_pred             CCCCCCCCCCCccccccccccc----cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCcc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFS----QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRS   80 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~   80 (439)
                      +.+.||||.++|++||++++..    .++..++.+++++||++|++++++.++++++||+.+++++.++...|...+...
T Consensus        28 ~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~  107 (472)
T PLN02987         28 RMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGS  107 (472)
T ss_pred             CCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHH
Confidence            4567899999999999988741    457888999999999999999999999999999999999988877775554434


Q ss_pred             cccccCCCccccCCchHHHHHHHHhhhcCChHHHhhcH-HHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHHhcC
Q 036255           81 KERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSV-SCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSIFGH  159 (439)
Q Consensus        81 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~fG~  159 (439)
                      ...++|.+++++.+|+.|+++|+++.+.++.+.+..+. ..+.+.+...++.|.  +++++.+.+.+++++++++++||.
T Consensus       108 ~~~~lg~~~l~~~~g~~wr~~R~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~t~~vi~~~~fg~  185 (472)
T PLN02987        108 ISNLLGKHSLLLMKGNLHKKMHSLTMSFANSSIIKDHLLLDIDRLIRFNLDSWS--SRVLLMEEAKKITFELTVKQLMSF  185 (472)
T ss_pred             HHHHhCcccccccCcHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhhc--cceehHHHHHHHHHHHHHHHHcCC
Confidence            44556756888899999999999987644444554433 234455555566664  468999999999999999999997


Q ss_pred             CCchHHHHHHHHHHHHhhccccccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC----CCCchHHHHhhcccccCCC
Q 036255          160 LDTGYKEILKKNYSTLDRGYNSFPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKS----VADTDLLASLMNYKDENGE  235 (439)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~----~~~~d~~~~ll~~~~~~~~  235 (439)
                      +.....+.+...+......+...++.+....+++..++++++.+++.++++++++..    ....|+++.+++..    .
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~----~  261 (472)
T PLN02987        186 DPGEWTESLRKEYVLVIEGFFSVPLPLFSTTYRRAIQARTKVAEALTLVVMKRRKEEEEGAEKKKDMLAALLASD----D  261 (472)
T ss_pred             CChHHHHHHHHHHHHHHhhhhcCCCcCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccHHHHHHhcC----C
Confidence            654333334333333332222211111123466778899999999999999887541    23468999999753    2


Q ss_pred             CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHh
Q 036255          236 HLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESL  315 (439)
Q Consensus       236 ~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~l  315 (439)
                      .+++++++..+..+++||+|||+.+++|++++|++||++|+++++|++++....+ ....++++++.+|||++||++|+|
T Consensus       262 ~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l~~E~~~~~~~~~-~~~~~~~~~l~~lpyl~a~i~EtL  340 (472)
T PLN02987        262 GFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMKS-DSYSLEWSDYKSMPFTQCVVNETL  340 (472)
T ss_pred             CCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHHHHHHHHHHcccC-CCCCCCHHHHhcChHHHHHHHHHH
Confidence            4899999999999999999999999999999999999999999999999875322 234578999999999999999999


Q ss_pred             cCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC----CCCcccccCCCccCCcc
Q 036255          316 RMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP----KPNTFMPFGNGVHACPG  391 (439)
Q Consensus       316 Rl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~----~~~~~~~Fg~G~r~C~G  391 (439)
                      |++|+++.++|++.+|++++||.|||||.|+++.+++||||++|+||++|+||||++..    ....++|||.|+|.|+|
T Consensus       341 Rl~p~~~~~~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~~~~~~~~~l~FG~G~r~C~G  420 (472)
T PLN02987        341 RVANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGGGPRLCPG  420 (472)
T ss_pred             HccCCcCCccccCCCCeeECCEEECCCCEEEEehHHhhCCcccCCCccccCcccCCCCCCCCCCCcceECCCCCCcCCCc
Confidence            99999998889999999999999999999999999999999999999999999998642    24679999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhCeeEecCCCCC-CCccccCCCCCceEEEec
Q 036255          392 SELAKLEMLVLLHHLVNEYRWEIIGPNEG-YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       392 ~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-~~~~~~p~~~~~v~~~~R  438 (439)
                      +++|..|++++++.|+++|++++.++... ...+.+|.+++++++++|
T Consensus       421 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~r  468 (472)
T PLN02987        421 YELARVALSVFLHRLVTRFSWVPAEQDKLVFFPTTRTQKRYPINVKRR  468 (472)
T ss_pred             HHHHHHHHHHHHHHHHhceEEEECCCCceeecccccCCCCceEEEEec
Confidence            99999999999999999999999766544 556889999999999998


No 18 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=1.6e-71  Score=534.23  Aligned_cols=413  Identities=23%  Similarity=0.341  Sum_probs=328.7

Q ss_pred             CCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCccccc
Q 036255            4 PNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSKER   83 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~   83 (439)
                      +..+.||||+++|++||++++...+++.++.+++++||++|++++++.++|+++||+.+++++.+....|.+........
T Consensus        26 ~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~~  105 (502)
T PLN02966         26 KRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHE  105 (502)
T ss_pred             CCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccce
Confidence            45578999999999999998854578889999999999999999999999999999999999987776565443221111


Q ss_pred             c--cCCCcc-ccCCchHHHHHHHH-hhhcCChHHHhhcHHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHH
Q 036255           84 S--IGPWAL-FFHQDGYHTRMRKL-VQSSLTPSMVRNSVSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLS  155 (439)
Q Consensus        84 ~--~g~~~~-~~~~g~~~~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~  155 (439)
                      .  .|..++ +..+|+.|+++|++ +++.|+++.+..+.+.+.+.+.++++.|.    .++.+|+.+.+..+++++++.+
T Consensus       106 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~~  185 (502)
T PLN02966        106 FISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQ  185 (502)
T ss_pred             eeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHHH
Confidence            1  232223 44578999999999 78899999999999999999999988873    3567999999999999999999


Q ss_pred             HhcCCCchH---HHHHHHHHHHHhhccc------ccccc--CC-Ccch-HHHHHHHHHHHHHHHHHHHHHhhc---CCCC
Q 036255          156 IFGHLDTGY---KEILKKNYSTLDRGYN------SFPIY--LP-GSLY-ATSLRARRRLDQTLSEIIKERKEK---SVAD  219 (439)
Q Consensus       156 ~fG~~~~~~---~~~~~~~~~~~~~~~~------~~~~~--~p-~~~~-~~~~~~~~~l~~~~~~~i~~~~~~---~~~~  219 (439)
                      +||.+.+..   ...+.+.+........      .+|+.  ++ ...+ .....+.+.+.+++.+.+++..+.   ....
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (502)
T PLN02966        186 AFGKKYNEDGEEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLDPKRVKPET  265 (502)
T ss_pred             HhCCccCccchHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence            999864322   2223333222211111      12210  11 0111 222345556667777776665332   1224


Q ss_pred             chHHHHhhcccccC--CCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCC
Q 036255          220 TDLLASLMNYKDEN--GEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLT  297 (439)
Q Consensus       220 ~d~~~~ll~~~~~~--~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~  297 (439)
                      .|+++.+++..+++  +..++++++.+++.++++||+|||+.+++|++++|++||++|+|+++|++++++..  +++.++
T Consensus       266 ~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~--~~~~~~  343 (502)
T PLN02966        266 ESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEK--GSTFVT  343 (502)
T ss_pred             ccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHHHHHHhccc--CCCcCC
Confidence            68999988754432  34589999999999999999999999999999999999999999999999998642  234579


Q ss_pred             HhhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCC-CCCCCCCCCCCCCC--
Q 036255          298 LAQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFF-SEPREFNPSRFEIG--  373 (439)
Q Consensus       298 ~~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~--  373 (439)
                      ++++++||||+|||+|+||++||+++ ++|.+.+|++++||.|||||.|.++++++||||++| |||++|+||||++.  
T Consensus       344 ~~dl~~lpyl~avi~E~LRl~p~v~~~~~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeRwl~~~~  423 (502)
T PLN02966        344 EDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGPNPDEFRPERFLEKEV  423 (502)
T ss_pred             HhhccCCcHHHHHHHHHhccCCCcccccCcccCCCeeEccEEECCCCEEEEecccccCCcccccCChhhCChhhhcCCCC
Confidence            99999999999999999999999997 479999999999999999999999999999999999 99999999999863  


Q ss_pred             ---CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCC
Q 036255          374 ---PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPN  418 (439)
Q Consensus       374 ---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~  418 (439)
                         ..+..|+|||.|+|+|+|++||++|++++++.||++|+|++.++.
T Consensus       424 ~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~  471 (502)
T PLN02966        424 DFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGM  471 (502)
T ss_pred             CcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCC
Confidence               235689999999999999999999999999999999999987654


No 19 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=1.1e-71  Score=532.33  Aligned_cols=421  Identities=15%  Similarity=0.223  Sum_probs=327.9

Q ss_pred             CCCCCCCCCCccccccccccccCcch---HHHHHHHhcCCeEE---EeecCceEEEecChHHHHHHHhhCCccccccCC-
Q 036255            6 PKLPPGSMGLPYIGETPKLFSQNPDD---FFSTRQKRYGEIFK---THILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-   78 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~~~~~~---~~~~~~~~yG~v~~---~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-   78 (439)
                      ++..|||++||++||+..+. .+...   ++.+..++||..++   .++++.++++++||+.+++|+.++...|.+... 
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~  108 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGML-HQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF  108 (500)
T ss_pred             cCCCCCCCCCCcccchHHHH-HccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence            45679999999999998775 33333   23333345887665   577889999999999999999876665655432 


Q ss_pred             cccccccCCCccccCCchHHHHHHHHhhhcCChHHHhhc--HHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHH
Q 036255           79 RSKERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNS--VSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVA  152 (439)
Q Consensus        79 ~~~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~  152 (439)
                      ......+| +++++.+|+.|+++|+++++.|+...+..+  .+.+.+.+..+++.+.    +++.+|+.+.+.++++|++
T Consensus       109 ~~~~~~~g-~gl~~~~g~~Wr~~Rk~l~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi  187 (500)
T PLN02169        109 KKIFDVLG-EGILTVDFELWEDLRKSNHALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS  187 (500)
T ss_pred             HHHHHhhc-CcccccCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence            23334566 899999999999999999999998876542  2445555555544442    3567999999999999999


Q ss_pred             HHHHhcCCCchH-----HHHHHHHHHHHhhcc---cccc-------ccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC-
Q 036255          153 VLSIFGHLDTGY-----KEILKKNYSTLDRGY---NSFP-------IYLPGSLYATSLRARRRLDQTLSEIIKERKEKS-  216 (439)
Q Consensus       153 ~~~~fG~~~~~~-----~~~~~~~~~~~~~~~---~~~~-------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-  216 (439)
                      ++++||.+.+..     ...+...+.......   ...|       .+++....++..++.+.+.+++.++|++++++. 
T Consensus       188 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~  267 (500)
T PLN02169        188 SILMTGYDPMSLSIEMLEVEFGEAADIGEEAIYYRHFKPVILWRLQNWIGIGLERKMRTALATVNRMFAKIISSRRKEEI  267 (500)
T ss_pred             HhheeCCCccccCCCCCCCHHHHHHHHHHHHHHhHHhccHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999999753211     112222222111100   0111       122233345567888899999999998876531 


Q ss_pred             ------CCCchHHHHhhcccccC---CCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHh
Q 036255          217 ------VADTDLLASLMNYKDEN---GEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYE  287 (439)
Q Consensus       217 ------~~~~d~~~~ll~~~~~~---~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  287 (439)
                            ....|+++.+++..+++   +..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||+++  
T Consensus       268 ~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~Pevq~kl~~Ei~~v--  345 (500)
T PLN02169        268 SRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEINTK--  345 (500)
T ss_pred             ccccccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCCHHHHHHHHHHHHhh--
Confidence                  11368999988764321   1247889999999999999999999999999999999999999999999876  


Q ss_pred             hcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeecccccc-CCEEeCCCCEEEeccccccCCCCCC-CCCCCC
Q 036255          288 QNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEY-KGHLIPKGWKVLPLFRNVHHNPDFF-SEPREF  365 (439)
Q Consensus       288 ~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~-~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~~F  365 (439)
                              ++.+++.+||||+|||+||||+|||+|.+.|.+.+|.++ +|+.|||||.|.+++|++||||++| +||++|
T Consensus       346 --------~~~~dl~~L~Yl~avi~EtLRl~P~vp~~~r~~~~d~~~~~G~~IpkGt~v~i~~~~ihrd~~~w~~dP~~F  417 (500)
T PLN02169        346 --------FDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKVDAESKIVICIYALGRMRSVWGEDALDF  417 (500)
T ss_pred             --------CCHHHHhcCHHHHHHHHHHHhcCCCCCcCceecCCCCCccCCEEECCCCEEEEcHHHhhCCccccCCChhhc
Confidence                    357899999999999999999999999988888877665 8999999999999999999999999 899999


Q ss_pred             CCCCCCCC----C--CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCCCCCceEEE
Q 036255          366 NPSRFEIG----P--KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPRNGLPAKFW  436 (439)
Q Consensus       366 ~P~R~~~~----~--~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~~~~~v~~~  436 (439)
                      +||||++.    .  .+..|+|||+|+|+|+|++||++|+++++++||++|++++.++...   ...+.+|+++++|+++
T Consensus       418 ~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~~~~~~~~l~~~~gl~l~l~  497 (500)
T PLN02169        418 KPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKIEAIPSILLRMKHGLKVTVT  497 (500)
T ss_pred             CccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCcccccceEEecCCCEEEEEE
Confidence            99999863    1  2678999999999999999999999999999999999998765332   4466789999999999


Q ss_pred             ec
Q 036255          437 KL  438 (439)
Q Consensus       437 ~R  438 (439)
                      +|
T Consensus       498 ~~  499 (500)
T PLN02169        498 KK  499 (500)
T ss_pred             eC
Confidence            88


No 20 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=3.7e-72  Score=538.54  Aligned_cols=422  Identities=31%  Similarity=0.521  Sum_probs=350.4

Q ss_pred             CCCCCCCccccccccccc-cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-cccc---c
Q 036255            9 PPGSMGLPYIGETPKLFS-QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-RSKE---R   83 (439)
Q Consensus         9 pPgp~~~P~lG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~---~   83 (439)
                      ||||+++|++||++++.. .+++.++.+++++||+||++++++.+.++|+||+.+++++..+...++..+. ....   .
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~   80 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG   80 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence            899999999999999962 6778889999999999999999999999999999999999988876766432 1221   1


Q ss_pred             ccCCCccccCCchHHHHHHHHhhhcCChH-HHhhcHHHHHHHHHHHHhhhcC----CCcccHHHHHHHHHHHHHHHHHhc
Q 036255           84 SIGPWALFFHQDGYHTRMRKLVQSSLTPS-MVRNSVSCIEATAMSTLDSWSG----GRLVNTFHEMKKFVFDVAVLSIFG  158 (439)
Q Consensus        84 ~~g~~~~~~~~g~~~~~~R~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~----~~~v~~~~~~~~~~~~~~~~~~fG  158 (439)
                      ..+..++++.+|+.|+.+|+++.+.|+.. .+ ++.+.+++.++++++.|.+    ++.+|+..+++.+++++++.++||
T Consensus        81 ~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~fG  159 (463)
T PF00067_consen   81 PFGGKGLFFSDGERWRRQRRLLAPAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVLFG  159 (463)
T ss_dssp             HHTTTSSTTSSHHHHHHHHHHHHHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccccc
Confidence            23348899999999999999999999988 56 8889999999888887742    236999999999999999999999


Q ss_pred             CCCc----hHHHHHHHHHHHHhhcc--------ccccc--cCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC----CCCc
Q 036255          159 HLDT----GYKEILKKNYSTLDRGY--------NSFPI--YLPGSLYATSLRARRRLDQTLSEIIKERKEKS----VADT  220 (439)
Q Consensus       159 ~~~~----~~~~~~~~~~~~~~~~~--------~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~----~~~~  220 (439)
                      .+..    .....+.+.+..+...+        ..+|+  +++...+++..++.+.+.+++.+++++++++.    ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  239 (463)
T PF00067_consen  160 KDFGSLDDEDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPTPLFRRFKRARDRLRKYIKEIIEERREELDDGDESRR  239 (463)
T ss_dssp             SHHHGTTHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHSSSSSCS
T ss_pred             ceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8532    12223344443332211        11232  24444456666777899999999999888652    2467


Q ss_pred             hHHHHhhccc-ccCC-CCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCH
Q 036255          221 DLLASLMNYK-DENG-EHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTL  298 (439)
Q Consensus       221 d~~~~ll~~~-~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~  298 (439)
                      |+++.+++.. +.++ ..+++++++..+..+++||++||+.+++|++++|++||++|+++++|++++.+    ....++.
T Consensus       240 d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~----~~~~~~~  315 (463)
T PF00067_consen  240 DLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLREEIDSVLG----DGREITF  315 (463)
T ss_dssp             SHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTT----TSSSHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccc
Confidence            9999999886 3333 37999999999999999999999999999999999999999999999999974    2346889


Q ss_pred             hhhcCCCcHHHHHHHHhcCCCCcc-cceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC----
Q 036255          299 AQTKNMPLTNKVIMESLRMASVVS-YTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG----  373 (439)
Q Consensus       299 ~~l~~l~~l~a~i~E~lRl~p~~~-~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~----  373 (439)
                      +++++||||+|||+||||++|+++ .++|.+.+|++++||.|||||.|.++.+++|+||++|+||++|+||||++.    
T Consensus       316 ~~l~~l~yl~a~i~EtlRl~p~~~~~~~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~dp~~F~P~R~~~~~~~~  395 (463)
T PF00067_consen  316 EDLSKLPYLDAVIKETLRLYPPVPFSLPRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPDPDEFDPERFLDERGIS  395 (463)
T ss_dssp             HHHGTGHHHHHHHHHHHHHSTSSSTEEEEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSSTTS--TTGGBTTTSTB
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999999999999 678999999999999999999999999999999999999999999999976    


Q ss_pred             -CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-----CCccccCCCCCceEE
Q 036255          374 -PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-----YEPFPIPRNGLPAKF  435 (439)
Q Consensus       374 -~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-----~~~~~~p~~~~~v~~  435 (439)
                       .....|+|||.|+|.|+|++||+.|+++++++||++|++++.++...     ...+..|+.++.|.|
T Consensus       396 ~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  463 (463)
T PF00067_consen  396 NRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPLKVKF  463 (463)
T ss_dssp             CSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSSEEEE
T ss_pred             ccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCcEEeC
Confidence             45789999999999999999999999999999999999999765443     235778888888875


No 21 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=7.5e-71  Score=524.63  Aligned_cols=422  Identities=20%  Similarity=0.260  Sum_probs=332.1

Q ss_pred             CCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-cccccccCC
Q 036255            9 PPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-RSKERSIGP   87 (439)
Q Consensus         9 pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~~~~g~   87 (439)
                      ||||+++|++||++++...+++.++.+++++||+||++++++.++|+|+||+.+++++.++...|+++.. .....+.|.
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~   80 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD   80 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence            7999999999999998645688899999999999999999999999999999999999887777766533 223334442


Q ss_pred             C-ccccC-CchHHHHHHHHhh-hcCChHHHhhcHHHHHHHHHHHHhhh----c--CCCcccHHHHHHHHHHHHHHHHHhc
Q 036255           88 W-ALFFH-QDGYHTRMRKLVQ-SSLTPSMVRNSVSCIEATAMSTLDSW----S--GGRLVNTFHEMKKFVFDVAVLSIFG  158 (439)
Q Consensus        88 ~-~~~~~-~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~----~--~~~~v~~~~~~~~~~~~~~~~~~fG  158 (439)
                      . .++.. +|+.|+++|+.+. +.++...+..+.+.+++.+..+++.+    .  .++.+|+.+.+..+++++++.++||
T Consensus        81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG  160 (466)
T PLN02655         81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG  160 (466)
T ss_pred             CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence            2 34444 4899999998665 55777677777776666655554443    2  3568999999999999999999999


Q ss_pred             CCCchH-----H------HHHHHHHHHHhhcc------ccccc--cCCCcchHH-HHHHHHHHHHHHHHHHHHHhhc---
Q 036255          159 HLDTGY-----K------EILKKNYSTLDRGY------NSFPI--YLPGSLYAT-SLRARRRLDQTLSEIIKERKEK---  215 (439)
Q Consensus       159 ~~~~~~-----~------~~~~~~~~~~~~~~------~~~~~--~~p~~~~~~-~~~~~~~l~~~~~~~i~~~~~~---  215 (439)
                      .+....     .      ..+...+..+....      ..+|+  ++|...+.+ ..+....+.+++++++++++++   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  240 (466)
T PLN02655        161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIAR  240 (466)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            753321     0      11222222222111      12221  233222222 2223334556777777766543   


Q ss_pred             CCCCchHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCC
Q 036255          216 SVADTDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRG  295 (439)
Q Consensus       216 ~~~~~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~  295 (439)
                      .....|+++.+++..    ..++++++.+++.++++||+|||+.+++|++++|++||++|+++++|++++++.     ..
T Consensus       241 ~~~~~d~l~~ll~~~----~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~~~-----~~  311 (466)
T PLN02655        241 GEERDCYLDFLLSEA----THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGD-----ER  311 (466)
T ss_pred             CCCcccHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC-----CC
Confidence            223468999999764    248999999999999999999999999999999999999999999999999753     23


Q ss_pred             CCHhhhcCCCcHHHHHHHHhcCCCCcccc-eeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC-
Q 036255          296 LTLAQTKNMPLTNKVIMESLRMASVVSYT-FREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG-  373 (439)
Q Consensus       296 ~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~-  373 (439)
                      ++.+++++||||+|||+||||++||++.. +|.+.+|++++||.|||||.|+++.+++||||++|+||++|+||||++. 
T Consensus       312 ~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~PeR~~~~~  391 (466)
T PLN02655        312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPERFLGEK  391 (466)
T ss_pred             CCHHHHhcChHHHHHHHHHhccCCCcCCCCCcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCccccCCCC
Confidence            89999999999999999999999999976 5999999999999999999999999999999999999999999999864 


Q ss_pred             ---CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC----CCccccCCCCCceEEEecC
Q 036255          374 ---PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG----YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       374 ---~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~----~~~~~~p~~~~~v~~~~R~  439 (439)
                         .....++|||+|+|.|||++||+.++++++++||++|++++.++...    ...+..|++++.|++++|.
T Consensus       392 ~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  464 (466)
T PLN02655        392 YESADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDEEKEDTVQLTTQKLHPLHAHLKPRG  464 (466)
T ss_pred             cccCCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCccccchhheeEeecCCcEEEEeecC
Confidence               23468999999999999999999999999999999999998765432    4555678899999999883


No 22 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=4.2e-71  Score=532.74  Aligned_cols=430  Identities=19%  Similarity=0.222  Sum_probs=332.0

Q ss_pred             CCCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-cccc
Q 036255            4 PNPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-RSKE   82 (439)
Q Consensus         4 ~~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~   82 (439)
                      ++.+.||||+++|++|++.++.....+..+.+++++||+||++++++.++|+++||+.+++++.++...|.++.. ....
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~~  106 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFD  106 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchHh
Confidence            466789999999999999887422246788999999999999999999999999999999999876665654432 2223


Q ss_pred             cccC--CCccccCCchHHHHHHHHhh-hcCChHHHhhcHHHHHHHHHHHHhhhcC-----CCcccHHHHHHHHHHHHHHH
Q 036255           83 RSIG--PWALFFHQDGYHTRMRKLVQ-SSLTPSMVRNSVSCIEATAMSTLDSWSG-----GRLVNTFHEMKKFVFDVAVL  154 (439)
Q Consensus        83 ~~~g--~~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~  154 (439)
                      .+.|  .++++..+|+.|+++|+.+. +.|+++.+..+.+.++++++++++.|.+     ++.+++...+..++++++++
T Consensus       107 ~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~~  186 (503)
T PLN02394        107 IFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMYR  186 (503)
T ss_pred             HhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHHH
Confidence            3333  24577788999999999996 8899988988989999999888887742     34589999999999999999


Q ss_pred             HHhcCCCchH----HHHHHHHHHHHh---hcc-----ccccccCCCc-chHH-HHHHHHHHHH-HHHHHHHHHhhc----
Q 036255          155 SIFGHLDTGY----KEILKKNYSTLD---RGY-----NSFPIYLPGS-LYAT-SLRARRRLDQ-TLSEIIKERKEK----  215 (439)
Q Consensus       155 ~~fG~~~~~~----~~~~~~~~~~~~---~~~-----~~~~~~~p~~-~~~~-~~~~~~~l~~-~~~~~i~~~~~~----  215 (439)
                      ++||.+....    ...+........   ..+     ..++++.+.. .+.+ .......... +...+++++++.    
T Consensus       187 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  266 (503)
T PLN02394        187 MMFDRRFESEDDPLFLKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAK  266 (503)
T ss_pred             HHhCCCcccccchhHHHHHHHHHHHHHHhcccccchhhhchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999854321    111111111111   110     0111111110 1111 1111111122 223345444331    


Q ss_pred             ---CCCCchHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCC
Q 036255          216 ---SVADTDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGE  292 (439)
Q Consensus       216 ---~~~~~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~  292 (439)
                         .....|+++.+++..++  +.++++++...+.++++||+|||+.+++|++++|++||++|+++++|++++++.    
T Consensus       267 ~~~~~~~~d~l~~ll~~~~~--~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~v~~~----  340 (503)
T PLN02394        267 GMDKEGLKCAIDHILEAQKK--GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGP----  340 (503)
T ss_pred             cCCcchhhhHHHHHHhcccc--CCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhCC----
Confidence               12336899999986533  348999999999999999999999999999999999999999999999999853    


Q ss_pred             CCCCCHhhhcCCCcHHHHHHHHhcCCCCcccc-eeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCC
Q 036255          293 KRGLTLAQTKNMPLTNKVIMESLRMASVVSYT-FREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFE  371 (439)
Q Consensus       293 ~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~  371 (439)
                      +..++++++++||||+|||+|+||++|++|+. +|.+.+|++++||.||+||.|.++.|++||||++|+||++|+||||+
T Consensus       341 ~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~P~~F~PeRwl  420 (503)
T PLN02394        341 GNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFL  420 (503)
T ss_pred             CCCCCHhHHhhCHHHHHHHHHHHhcCCCcccccceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCCccccCccccC
Confidence            34578999999999999999999999999975 58999999999999999999999999999999999999999999998


Q ss_pred             CCC-------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC-C-----CC-ccccCCCCCceEEEe
Q 036255          372 IGP-------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE-G-----YE-PFPIPRNGLPAKFWK  437 (439)
Q Consensus       372 ~~~-------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~-~-----~~-~~~~p~~~~~v~~~~  437 (439)
                      +..       ....|+|||.|+|+|+|++||++|++++++.|+++|++++.++.+ .     +. .....+.++.|++.+
T Consensus       421 ~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  500 (503)
T PLN02394        421 EEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHIAKHSTVVFKP  500 (503)
T ss_pred             CCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeeccCCCceEEeec
Confidence            531       246899999999999999999999999999999999999876653 2     32 455355689999999


Q ss_pred             cC
Q 036255          438 LR  439 (439)
Q Consensus       438 R~  439 (439)
                      |+
T Consensus       501 r~  502 (503)
T PLN02394        501 RS  502 (503)
T ss_pred             CC
Confidence            95


No 23 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=1.3e-71  Score=497.72  Aligned_cols=425  Identities=22%  Similarity=0.328  Sum_probs=353.3

Q ss_pred             CCCCCCCCCCCccccccccc---cccCcchHHHHHHHhcCCeEEEe-ecCceEEEecChHHHHHHHhhCCccc-cc-cCC
Q 036255            5 NPKLPPGSMGLPYIGETPKL---FSQNPDDFFSTRQKRYGEIFKTH-ILGYKCIMLVNSEAIRYVLVTHAHLF-KP-TYP   78 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~---~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~v~i~~p~~~~~i~~~~~~~~-~~-~~~   78 (439)
                      +...+|||+++|++|.++.+   -..+.++...+.+++||+||+.. +|+...|.+.||++++.++...+... .. ...
T Consensus        48 ~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~~~~  127 (519)
T KOG0159|consen   48 PFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPLLIE  127 (519)
T ss_pred             ChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCcccccc
Confidence            44567999999999999843   22466788888999999999999 77799999999999999998877532 21 111


Q ss_pred             --cccccccC-CCccccCCchHHHHHHHHhhhc-CChHHHhhcHHHHHHHHHHHHhhhc-------CCCcccHHHHHHHH
Q 036255           79 --RSKERSIG-PWALFFHQDGYHTRMRKLVQSS-LTPSMVRNSVSCIEATAMSTLDSWS-------GGRLVNTFHEMKKF  147 (439)
Q Consensus        79 --~~~~~~~g-~~~~~~~~g~~~~~~R~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~v~~~~~~~~~  147 (439)
                        ...+..+| ..|+++.+|++|.+.|..+++. +.++.++.+.+.++..+++++..+.       ...+.|+.+.+.++
T Consensus       128 ~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~w  207 (519)
T KOG0159|consen  128 PWVAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRW  207 (519)
T ss_pred             hhhhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHH
Confidence              23344444 5789999999999999999986 6689999999999999998877652       23478999999999


Q ss_pred             HHHHHHHHHhcCC-------CchHHHHHHHHHHHHhh----ccccccc--cCCCcchHHHHHHHHHHHHHHHHHHHHHhh
Q 036255          148 VFDVAVLSIFGHL-------DTGYKEILKKNYSTLDR----GYNSFPI--YLPGSLYATSLRARRRLDQTLSEIIKERKE  214 (439)
Q Consensus       148 ~~~~~~~~~fG~~-------~~~~~~~~~~~~~~~~~----~~~~~~~--~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~  214 (439)
                      +++.+|.++||..       .++....+.++...+..    .....++  +++.+.|++..++.+.+.++..++|++..+
T Consensus       208 slEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~l~~~p~l~r~~~t~~wk~~~~~~D~i~~~~~~~Id~~l~  287 (519)
T KOG0159|consen  208 SLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQLMLMPSLWRYFPTKVWKDFVRAWDQIFDVGDKYIDNALE  287 (519)
T ss_pred             HHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHHHHhcchHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999974       22344444444433332    1222233  367778999999999999888888887654


Q ss_pred             c----CC---CCc-hHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Q 036255          215 K----SV---ADT-DLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIY  286 (439)
Q Consensus       215 ~----~~---~~~-d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~  286 (439)
                      .    ..   ... .+...+.++      .++.+++..+++++++||.|||+.++.|+||+|++||++|++|++|+.++.
T Consensus       288 ~l~~~~~~~~~~~~~l~~~L~~~------~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~Q~~L~~Ei~~~~  361 (519)
T KOG0159|consen  288 ELEKQDSAGSEYTGSLLELLLRK------ELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEVQQRLREEILAVL  361 (519)
T ss_pred             HHHhccccccchhHHHHHHHHHc------cCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHHHHHHHHHHHhhC
Confidence            3    11   112 333444433      388999999999999999999999999999999999999999999999997


Q ss_pred             hhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCC
Q 036255          287 EQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFN  366 (439)
Q Consensus       287 ~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~  366 (439)
                      ..   ++..++.+++.+||||.||||||+||||.+|++.|+..+|.+++||.|||||.|.++.+.+.+||++|++|++|+
T Consensus       362 p~---~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~~~~F~~p~~F~  438 (519)
T KOG0159|consen  362 PS---GNSELTQKALTNMPYLRACIKETLRLYPVVPGNGRVLPKDLVLSGYHVPAGTLVVLFLYVLGRNPAYFPDPEEFL  438 (519)
T ss_pred             CC---cccccchHHHhhCHHHHHHHHhhhceeccccccccccchhceeccceecCCCeEEEeehhhccChhhCCCccccC
Confidence            54   356688999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCC----CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCCCCCceEEEec
Q 036255          367 PSRFEIG----PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       367 P~R~~~~----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~~~~~v~~~~R  438 (439)
                      |||||+.    .++..++|||.|+|+|+|+++|++||.++|++|+++|+++..++.+.   ...+..|..++.++|++|
T Consensus       439 PeRWL~~~~~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~pv~~~~~~il~P~~~l~f~f~~r  517 (519)
T KOG0159|consen  439 PERWLKPSTKTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEEPVEYVYRFILVPNRPLRFKFRPR  517 (519)
T ss_pred             hhhhcccccCCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCCCccceeEEEEcCCCCcceeeeeC
Confidence            9999975    47899999999999999999999999999999999999999885443   789999999999999988


No 24 
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=8.9e-71  Score=531.44  Aligned_cols=430  Identities=20%  Similarity=0.257  Sum_probs=345.0

Q ss_pred             CCCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCc--ccc
Q 036255            5 NPKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPR--SKE   82 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~--~~~   82 (439)
                      +.+.||||+++|++||++++. .+++.++.+++++||++|++++++.++++++||+.+++++.++...|+++...  ...
T Consensus        30 ~~~~ppgp~~~pl~G~~~~~~-~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~~  108 (514)
T PLN03112         30 SLRLPPGPPRWPIVGNLLQLG-PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAVH  108 (514)
T ss_pred             CCCCccCCCCCCeeeeHHhcC-CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCccccee
Confidence            457899999999999998884 67888899999999999999999999999999999999998777667664332  122


Q ss_pred             cccCC-CccccCCchHHHHHHHHhh-hcCChHHHhhcHHHHHHHHHHHHhhh----cCCCcccHHHHHHHHHHHHHHHHH
Q 036255           83 RSIGP-WALFFHQDGYHTRMRKLVQ-SSLTPSMVRNSVSCIEATAMSTLDSW----SGGRLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        83 ~~~g~-~~~~~~~g~~~~~~R~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      ..+|. .+++..+|+.|+++|+++. +.|+.+.+..+.+.+.+.++++++.+    .+++++|+.+.+..+++++++.++
T Consensus       109 ~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~  188 (514)
T PLN03112        109 LAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRML  188 (514)
T ss_pred             eccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHHH
Confidence            23442 3456678999999999964 68999999999999988888887763    235689999999999999999999


Q ss_pred             hcCCCc-------hHHHHHHHHHHHHhhcc--c----cccc--cC-CCcchHHHHHHHHHHHHHHHHHHHHHhhc-----
Q 036255          157 FGHLDT-------GYKEILKKNYSTLDRGY--N----SFPI--YL-PGSLYATSLRARRRLDQTLSEIIKERKEK-----  215 (439)
Q Consensus       157 fG~~~~-------~~~~~~~~~~~~~~~~~--~----~~~~--~~-p~~~~~~~~~~~~~l~~~~~~~i~~~~~~-----  215 (439)
                      ||.+..       .....+......+....  .    .+|.  ++ +....++..++.+.+.+++.++++++++.     
T Consensus       189 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  268 (514)
T PLN03112        189 LGKQYFGAESAGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARSGKL  268 (514)
T ss_pred             cCCccccccccchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            997531       11233333333332211  1    1221  11 21123445567778888888888876643     


Q ss_pred             -CCCCchHHHHhhcccccCC-CCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCC
Q 036255          216 -SVADTDLLASLMNYKDENG-EHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEK  293 (439)
Q Consensus       216 -~~~~~d~~~~ll~~~~~~~-~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~  293 (439)
                       .....|+++.++++..+++ ..++++++.+++..+++||+|||+.+++|++++|++||++|+++++|++++++.    .
T Consensus       269 ~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~kl~~Ei~~~~~~----~  344 (514)
T PLN03112        269 PGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLRKIQEELDSVVGR----N  344 (514)
T ss_pred             cCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHHHHHHHHHHhcCC----C
Confidence             1233589999998643332 258999999999999999999999999999999999999999999999999753    3


Q ss_pred             CCCCHhhhcCCCcHHHHHHHHhcCCCCccc-ceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCC
Q 036255          294 RGLTLAQTKNMPLTNKVIMESLRMASVVSY-TFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEI  372 (439)
Q Consensus       294 ~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~-~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~  372 (439)
                      +.++.+++++|||++|||+||+|+||++++ ++|.+.+|+.++|+.|||||.|.++.+++||||++|+||++|+||||..
T Consensus       345 ~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~~~dP~~F~PeRf~~  424 (514)
T PLN03112        345 RMVQESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWP  424 (514)
T ss_pred             CcCChhhhccCcHHHHHHHHHhccCCCcccccccccCCCeeEcCEEeCCCCEEEEehHHhhCCcccCCChhhcCCcccCC
Confidence            458999999999999999999999999997 5799999999999999999999999999999999999999999999754


Q ss_pred             C---------CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC--C------CCccccCCCCCceEE
Q 036255          373 G---------PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE--G------YEPFPIPRNGLPAKF  435 (439)
Q Consensus       373 ~---------~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~--~------~~~~~~p~~~~~v~~  435 (439)
                      .         .....|+|||.|+|.|+|++||++|+++++++||++|++++.++..  .      ......+++++.+++
T Consensus       425 ~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  504 (514)
T PLN03112        425 AEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVYGMTMPKAKPLRAVA  504 (514)
T ss_pred             CCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCccccCcccccCCCeEEEe
Confidence            2         1235799999999999999999999999999999999999875431  1      234444667999999


Q ss_pred             EecC
Q 036255          436 WKLR  439 (439)
Q Consensus       436 ~~R~  439 (439)
                      ++|.
T Consensus       505 ~~r~  508 (514)
T PLN03112        505 TPRL  508 (514)
T ss_pred             ecCC
Confidence            9984


No 25 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=7.7e-71  Score=531.69  Aligned_cols=431  Identities=16%  Similarity=0.210  Sum_probs=334.6

Q ss_pred             CCCCCCCCCCccccccccccccCcchHHHHHHHhc---CCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC--cc
Q 036255            6 PKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRY---GEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP--RS   80 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~--~~   80 (439)
                      ++.+|||+++|++||++.++ .+ +..+.++.++|   |++|++++++.+.++++||+.+++++.++...|.....  ..
T Consensus        29 ~~~~pgp~~~p~~G~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~  106 (516)
T PLN03195         29 QRNRKGPKSWPIIGAALEQL-KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSY  106 (516)
T ss_pred             ccccCCCCCCCeecchHHHH-hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHH
Confidence            35579999999999998765 33 33456777777   89999999999999999999999999765443443311  12


Q ss_pred             cccccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHH-HHHHHHHHhhh----cCCCcccHHHHHHHHHHHHHHHH
Q 036255           81 KERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCI-EATAMSTLDSW----SGGRLVNTFHEMKKFVFDVAVLS  155 (439)
Q Consensus        81 ~~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~----~~~~~v~~~~~~~~~~~~~~~~~  155 (439)
                      ...++| +++++.+|+.|+++|+++++.|+.+.+..+.+.+ .+.++.+.+.+    .+++.+|+.+++..+++++++.+
T Consensus       107 ~~~~~g-~~l~~~~g~~w~~~Rr~l~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        107 MEVLLG-DGIFNVDGELWRKQRKTASFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHHHhc-CeeeccCcHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            233456 6788889999999999999999999998888865 44444444333    34568999999999999999999


Q ss_pred             HhcCCCchH-----HHHHHHHHHHHhhcc--cc-ccc-----cCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC------
Q 036255          156 IFGHLDTGY-----KEILKKNYSTLDRGY--NS-FPI-----YLPGSLYATSLRARRRLDQTLSEIIKERKEKS------  216 (439)
Q Consensus       156 ~fG~~~~~~-----~~~~~~~~~~~~~~~--~~-~~~-----~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~------  216 (439)
                      +||.+....     ...+...+.......  .. .+.     +++....++..++.+.+.+++.+++++++++.      
T Consensus       186 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  265 (516)
T PLN03195        186 GFGVEIGTLSPSLPENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEMDEARKS  265 (516)
T ss_pred             HhCCCccccccCCCccHHHHHHHHHHHHHHHHHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence            999753211     112332222221110  00 011     11111123344567778888888887765431      


Q ss_pred             --CCCchHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhc-----
Q 036255          217 --VADTDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQN-----  289 (439)
Q Consensus       217 --~~~~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-----  289 (439)
                        ....|+++.+++..++.+..++++++++++.++++||+|||+.+++|++++|++||++|+|+++|++++.+..     
T Consensus       266 ~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~~~~~~~~~~  345 (516)
T PLN03195        266 GKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEED  345 (516)
T ss_pred             cccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhccccccc
Confidence              1246899999876443344699999999999999999999999999999999999999999999999987532     


Q ss_pred             C-----------CCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeecccccc-CCEEeCCCCEEEeccccccCCCC
Q 036255          290 D-----------GEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEY-KGHLIPKGWKVLPLFRNVHHNPD  357 (439)
Q Consensus       290 ~-----------~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~-~g~~Ip~G~~v~~~~~~~~~d~~  357 (439)
                      .           +.++.++++++++||||+|||+||||++||+|..+|.+.+|..+ +|+.|||||.|.++.+++||||+
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~~r~~~~d~~~~~G~~IpkGt~V~~~~~~~h~dp~  425 (516)
T PLN03195        346 PEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGTKVKAGGMVTYVPYSMGRMEY  425 (516)
T ss_pred             ccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcchhhhhccCcCcCCCcEECCCCEEEEehHhhccChh
Confidence            0           01345789999999999999999999999999888878887666 89999999999999999999999


Q ss_pred             CC-CCCCCCCCCCCCCC-----CCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCC
Q 036255          358 FF-SEPREFNPSRFEIG-----PKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPR  428 (439)
Q Consensus       358 ~~-~~p~~F~P~R~~~~-----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~  428 (439)
                      +| +||++|+||||+++     ..+..|+|||.|+|.|+|++||++|++++++.|+++|++++.++.+.   ...+..|+
T Consensus       426 ~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~  505 (516)
T PLN03195        426 NWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPVKYRMMTILSMA  505 (516)
T ss_pred             hhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcceeeeeeEEecC
Confidence            99 99999999999853     24567999999999999999999999999999999999998755333   33456799


Q ss_pred             CCCceEEEecC
Q 036255          429 NGLPAKFWKLR  439 (439)
Q Consensus       429 ~~~~v~~~~R~  439 (439)
                      ++++|++++|.
T Consensus       506 ~~~~v~~~~r~  516 (516)
T PLN03195        506 NGLKVTVSRRS  516 (516)
T ss_pred             CCEEEEEEeCC
Confidence            99999999985


No 26 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=4.6e-70  Score=523.08  Aligned_cols=429  Identities=19%  Similarity=0.274  Sum_probs=327.3

Q ss_pred             CCCCCCCCCCccccccccccccCcc-hHHHHHHHhc-CCeEEEeecCceEEEecChHHHHHHHhhCCccccccCCccccc
Q 036255            6 PKLPPGSMGLPYIGETPKLFSQNPD-DFFSTRQKRY-GEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYPRSKER   83 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~~~~~-~~~~~~~~~y-G~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~~~~~~   83 (439)
                      .+.||||+++|++||++++...++. .++.+..++| |+||++++++.++|+|+||+.+++++.++...|++++......
T Consensus        39 ~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~  118 (534)
T PLN03018         39 RQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIME  118 (534)
T ss_pred             CCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhh
Confidence            3579999999999999987533343 4566666766 7999999999999999999999999988777787765322222


Q ss_pred             ccCC--CccccC-CchHHHHHHHHhhhcCChHHHhh-cHHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHH
Q 036255           84 SIGP--WALFFH-QDGYHTRMRKLVQSSLTPSMVRN-SVSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLS  155 (439)
Q Consensus        84 ~~g~--~~~~~~-~g~~~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~  155 (439)
                      .+|.  .++++. +|+.|+++|+++++.|......+ +.+..+.++.++++.+.    .++++|+.+.+..+++++++++
T Consensus       119 ~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~~  198 (534)
T PLN03018        119 TIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMRM  198 (534)
T ss_pred             hhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHHH
Confidence            2342  246665 59999999999999875444433 44444455666655543    3457999999999999999999


Q ss_pred             HhcCCCch----------HHHHHHHHHHHHhhcccc---------ccccCCC----cchHHHHHHHHHHHHHHHHHHHHH
Q 036255          156 IFGHLDTG----------YKEILKKNYSTLDRGYNS---------FPIYLPG----SLYATSLRARRRLDQTLSEIIKER  212 (439)
Q Consensus       156 ~fG~~~~~----------~~~~~~~~~~~~~~~~~~---------~~~~~p~----~~~~~~~~~~~~l~~~~~~~i~~~  212 (439)
                      +||.+...          ....+......+...+..         ++.++..    ....+.....+.+.+++.++++++
T Consensus       199 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  278 (534)
T PLN03018        199 LFGRRHVTKENVFSDDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPIIDER  278 (534)
T ss_pred             HhCCccccccccccccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99985311          011111111111111111         1111110    112233344566777888888776


Q ss_pred             hhc----CC--CCchHHHHhhcccccCCC-CCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHH
Q 036255          213 KEK----SV--ADTDLLASLMNYKDENGE-HLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLI  285 (439)
Q Consensus       213 ~~~----~~--~~~d~~~~ll~~~~~~~~-~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~  285 (439)
                      .+.    ..  ...|+++.+++..++++. .+++++++.++..+++||+|||+.+++|++++|++||++|+++++||+++
T Consensus       279 ~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v  358 (534)
T PLN03018        279 VELWREKGGKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEV  358 (534)
T ss_pred             HHHhhhccCCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            542    11  236899999976543332 48999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccc-eeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCC
Q 036255          286 YEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYT-FREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPRE  364 (439)
Q Consensus       286 ~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~-~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~  364 (439)
                      ++.    ++.++.+++.+||||+|||+||||++|++|.. +|.+.+|++++||.|||||.|+++.+++||||++|+||++
T Consensus       359 ~~~----~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~~~~p~~  434 (534)
T PLN03018        359 VGK----DRLVQESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIWKDPLV  434 (534)
T ss_pred             hCC----CCCCCHHHhcCCHHHHHHHHHHHhcCCCccccCCcccCCCeeECCEEECCCCEEEEChHHhcCCcccCCCccc
Confidence            753    45688999999999999999999999999976 5999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCC----------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC-----CCccccCCC
Q 036255          365 FNPSRFEIGP----------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG-----YEPFPIPRN  429 (439)
Q Consensus       365 F~P~R~~~~~----------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~-----~~~~~~p~~  429 (439)
                      |+||||++..          .+..|+|||.|+|.|+|+++|++|+++++++|+++|++++.++...     ...+...++
T Consensus       435 F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~  514 (534)
T PLN03018        435 YEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDASLLMAK  514 (534)
T ss_pred             cCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCccccccceecCC
Confidence            9999998531          3468999999999999999999999999999999999998765311     223344457


Q ss_pred             CCceEEEec
Q 036255          430 GLPAKFWKL  438 (439)
Q Consensus       430 ~~~v~~~~R  438 (439)
                      +++|++++|
T Consensus       515 ~~~v~~~~R  523 (534)
T PLN03018        515 PLLLSVEPR  523 (534)
T ss_pred             CeEEEEEec
Confidence            899999998


No 27 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=2e-70  Score=477.82  Aligned_cols=428  Identities=25%  Similarity=0.449  Sum_probs=364.8

Q ss_pred             CCCCCCCCC-ccccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccc--cccCCccccc
Q 036255            7 KLPPGSMGL-PYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLF--KPTYPRSKER   83 (439)
Q Consensus         7 ~~pPgp~~~-P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~--~~~~~~~~~~   83 (439)
                      ..||-..|| |++|++.++ +.+|.+|++++++|||+||++.++|+.+.++.||+....+++......  ...+......
T Consensus        31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~  109 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP  109 (486)
T ss_pred             CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh
Confidence            489999998 999999999 699999999999999999999999999999999999999998874333  3333367778


Q ss_pred             ccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhh-hcCCCccc-HHHHHHHHHHHHHHHHHhcCCC
Q 036255           84 SIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDS-WSGGRLVN-TFHEMKKFVFDVAVLSIFGHLD  161 (439)
Q Consensus        84 ~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~v~-~~~~~~~~~~~~~~~~~fG~~~  161 (439)
                      .||+.-+...++....++.+++...+....++++.+.|.+++.+.+.. |.+...+| +.+....+.+.+.-.+++|...
T Consensus       110 vFg~~v~~d~~~~~~~e~~~~~k~~L~~~~lk~~~e~m~~el~~~f~~~~~~s~~~d~l~~~~~~ii~tAs~~ll~~e~r  189 (486)
T KOG0684|consen  110 VFGKGVVYDVPNHVMMEQKKFFKSALGGVALKSLVELMLEELHAYFETSLGESGETDGLYTFCRLIIFTASRLLLGGEVR  189 (486)
T ss_pred             hcCCCccccCCCchHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHhcccccccchhHhhhhhHHHhhhhHHHhhhhhhh
Confidence            888555556788899999999999999999999999999999988877 65444444 5566666666666666666543


Q ss_pred             chHHHHHHHHHHHHhhcccc----ccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCC-CCchHHHHhhcccccCCCC
Q 036255          162 TGYKEILKKNYSTLDRGYNS----FPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKSV-ADTDLLASLMNYKDENGEH  236 (439)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~d~~~~ll~~~~~~~~~  236 (439)
                      .....+....+.++...+..    ||.++|.+..++..++++++.+.+...+.++++..+ .+.|.++.+++ ...++.+
T Consensus       190 ~~~d~~~a~l~~dLd~~F~~~d~~FP~~LP~~~~r~~~ra~~~i~k~f~~~i~~rr~s~s~~~~dmlq~l~~-~y~dg~~  268 (486)
T KOG0684|consen  190 DQLDADVAKLYHDLDQGFQPFDFLFPYNLPIPLLRRRDRARKKISKIFSKIILDRRASISKWDNDMLQSLME-KYKDGRP  268 (486)
T ss_pred             hhhcchHHHHHHHHhccccchHhhcccCCCcchhhhHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHH-HhhcCCc
Confidence            44344555556666665543    555777788888889999999999999999998865 45689999888 4455667


Q ss_pred             CChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhc
Q 036255          237 LTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESLR  316 (439)
Q Consensus       237 l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR  316 (439)
                      .+++|++...+.+++||++||+.|.+|++++|++|||+++.+++|+.+++++   ....++.+.+++||+|+.||+||||
T Consensus       269 ~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vlG~---~~~~l~~d~L~~lplL~~~IkEtLR  345 (486)
T KOG0684|consen  269 TTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVLGE---KKEKLTYDQLKDLPLLDSCIKETLR  345 (486)
T ss_pred             CcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHhhc---cCCCCCHHHHhcchHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999975   3344999999999999999999999


Q ss_pred             CCCCcccceeeeccccccCC----EEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCC---------CCCcccccC
Q 036255          317 MASVVSYTFREAVEDVEYKG----HLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGP---------KPNTFMPFG  383 (439)
Q Consensus       317 l~p~~~~~~r~~~~~~~~~g----~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~---------~~~~~~~Fg  383 (439)
                      |+||.+.+.|.+.+|+++.+    |.||+|..|.++++.+||||++|+||++|+||||+++.         -.++|+|||
T Consensus       346 L~~p~~~~~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~~Fk~dRf~~~~~~~~k~g~kl~yy~mpfG  425 (486)
T KOG0684|consen  346 LHPPAHSLMRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPEDFKPDRFLKDNGESKKNGEKLDYYYMPFG  425 (486)
T ss_pred             cCCchhhHHHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChhhCChhhccCCCcccccccccccccccccC
Confidence            99999999999999999976    99999999999999999999999999999999999641         134679999


Q ss_pred             CCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCC-CC---CCccccCCCCCceEEEecC
Q 036255          384 NGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPN-EG---YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       384 ~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~-~~---~~~~~~p~~~~~v~~~~R~  439 (439)
                      +|.|.|||+.||.+|+|+++..+|++|++++.++. +.   ...+..|..+|+|+.++|.
T Consensus       426 aGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~s~~v~~P~g~v~irYK~R~  485 (486)
T KOG0684|consen  426 AGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDYSRMVMQPEGDVRIRYKRRP  485 (486)
T ss_pred             CCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCHHHhhcCCCCCceEEEeecC
Confidence            99999999999999999999999999999999953 32   5679999999999999884


No 28 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1e-69  Score=526.11  Aligned_cols=412  Identities=18%  Similarity=0.279  Sum_probs=327.2

Q ss_pred             ccccccccccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-cccccccCCCccccCCch
Q 036255           18 IGETPKLFSQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-RSKERSIGPWALFFHQDG   96 (439)
Q Consensus        18 lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~   96 (439)
                      +||+..+.++..+..+.+++++||+||++++++.++++|+||+.+++++..+...|..... .......| .++++.+|+
T Consensus       142 ~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~g-~~l~~~dge  220 (633)
T PLN02738        142 KGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVMG-KGLIPADGE  220 (633)
T ss_pred             cCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhccC-CceecCCcH
Confidence            4555555444556778999999999999999888899999999999999876655655422 22223345 678889999


Q ss_pred             HHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHHHhcCCCch------HHH
Q 036255           97 YHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLSIFGHLDTG------YKE  166 (439)
Q Consensus        97 ~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~~fG~~~~~------~~~  166 (439)
                      .|+++|+++++.|+.+.+..+.+.+.+.++++++.+.    +++.+|+...+..+++|+++.++||.+.+.      ...
T Consensus       221 ~wr~rRr~l~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~~~~~  300 (633)
T PLN02738        221 IWRVRRRAIVPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDTGIVE  300 (633)
T ss_pred             HHHHHHHhccHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccchHHHH
Confidence            9999999999999999999999999999998888774    367899999999999999999999985432      112


Q ss_pred             HHHHHHHHHhhc-ccccccc-CCC-----cchHHHHHHHHHHHHHHHHHHHHHhh---c----------CCCCchHHHHh
Q 036255          167 ILKKNYSTLDRG-YNSFPIY-LPG-----SLYATSLRARRRLDQTLSEIIKERKE---K----------SVADTDLLASL  226 (439)
Q Consensus       167 ~~~~~~~~~~~~-~~~~~~~-~p~-----~~~~~~~~~~~~l~~~~~~~i~~~~~---~----------~~~~~d~~~~l  226 (439)
                      .+...+...... ...++.| +|.     ...++..++.+.+.+.+.++++.+++   +          ...+.|+++.+
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~L  380 (633)
T PLN02738        301 AVYTVLREAEDRSVSPIPVWEIPIWKDISPRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFL  380 (633)
T ss_pred             HHHHHHHHHHHHhhcchhhhhhhHHhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHH
Confidence            222222221111 1111111 111     11233334455555555555543221   0          11235788888


Q ss_pred             hcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCc
Q 036255          227 MNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPL  306 (439)
Q Consensus       227 l~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~  306 (439)
                      ++..    ..++++++.+++..+++||+|||+.+++|++++|++||++|+|+|+|++++++     ++.++++++++|||
T Consensus       381 l~~~----~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~~L~~~Pevq~kLreEl~~v~~-----~~~~t~edL~kLPY  451 (633)
T PLN02738        381 LASG----DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLG-----DRFPTIEDMKKLKY  451 (633)
T ss_pred             HHcC----CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcC-----CCCCCHHHHccCHH
Confidence            8653    24899999999999999999999999999999999999999999999999974     34679999999999


Q ss_pred             HHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCC-------CCCCcc
Q 036255          307 TNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIG-------PKPNTF  379 (439)
Q Consensus       307 l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~-------~~~~~~  379 (439)
                      |+|||+|+|||||+++.++|++.+|++++||.|||||.|.++.|.+||||++|+||++|+||||+.+       .....|
T Consensus       452 L~AVIkEtLRL~p~~p~~~R~a~~d~~i~gy~IPkGT~V~~s~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~  531 (633)
T PLN02738        452 TTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSY  531 (633)
T ss_pred             HHHHHHHHHhcCCCccccceeeccCceECCEEECCCCEEEecHHHHhCCccccCCccccCcccCCCCCCCccccCCCCce
Confidence            9999999999999999988999999999999999999999999999999999999999999999842       134689


Q ss_pred             cccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC----CCccccCCCCCceEEEecC
Q 036255          380 MPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG----YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       380 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~----~~~~~~p~~~~~v~~~~R~  439 (439)
                      +|||.|+|.|+|++||++|++++++.|+++|+|++.++.+.    ...+..|.++++|++++|.
T Consensus       532 vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~~~~~~~~~~~~p~~~l~v~l~~R~  595 (633)
T PLN02738        532 LPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAPPVKMTTGATIHTTEGLKMTVTRRT  595 (633)
T ss_pred             eCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCCCcccccceEEeeCCCcEEEEEECC
Confidence            99999999999999999999999999999999999876432    3467788999999999984


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=2.6e-68  Score=509.35  Aligned_cols=422  Identities=20%  Similarity=0.282  Sum_probs=336.4

Q ss_pred             CCCCCCCCCcccccccccc----ccCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCCccccccCC-ccc
Q 036255            7 KLPPGSMGLPYIGETPKLF----SQNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPTYP-RSK   81 (439)
Q Consensus         7 ~~pPgp~~~P~lG~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~~~-~~~   81 (439)
                      +.-.|-.|||++|..+++.    .+.++..+.+++++||+||++++++.++++++||+++++++.+.+..|..... ...
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~   91 (489)
T PLN02936         12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS   91 (489)
T ss_pred             ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence            5567889999999988774    35667889999999999999999999999999999999999876555655432 222


Q ss_pred             ccccCCCccccCCchHHHHHHHHhhhcCChHHHhhcHH-HHHHHHHHHHhhhc----CCCcccHHHHHHHHHHHHHHHHH
Q 036255           82 ERSIGPWALFFHQDGYHTRMRKLVQSSLTPSMVRNSVS-CIEATAMSTLDSWS----GGRLVNTFHEMKKFVFDVAVLSI  156 (439)
Q Consensus        82 ~~~~g~~~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~----~~~~v~~~~~~~~~~~~~~~~~~  156 (439)
                      ...+| .++++.+|+.|+++|+++++.|+...+..+.+ .+.+.++++++.+.    +++++|+.+.++.+++++++.++
T Consensus        92 ~~~~~-~~i~~~~g~~wk~~Rk~l~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~~~~  170 (489)
T PLN02936         92 EFLFG-SGFAIAEGELWTARRRAVVPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIGLSV  170 (489)
T ss_pred             HHHhc-CccccCCchHHHHHHHhhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHH
Confidence            33455 77888999999999999999999888877654 56777777766652    35689999999999999999999


Q ss_pred             hcCCCch------HHHHHHHHHHHHhh-cccccccc-CC-----CcchHHHHHHHHHHHHHHHHHHHHHhhc----C---
Q 036255          157 FGHLDTG------YKEILKKNYSTLDR-GYNSFPIY-LP-----GSLYATSLRARRRLDQTLSEIIKERKEK----S---  216 (439)
Q Consensus       157 fG~~~~~------~~~~~~~~~~~~~~-~~~~~~~~-~p-----~~~~~~~~~~~~~l~~~~~~~i~~~~~~----~---  216 (439)
                      ||.+.+.      ....+...+..... ....+|.+ ++     .+..++..++.+.+.+++.++++++++.    .   
T Consensus       171 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~p~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~  250 (489)
T PLN02936        171 FNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRETVEDLVDKCKEIVEAEGEVI  250 (489)
T ss_pred             cCCCccccccCcHHHHHHHHHHHHHHHhhhccchHHhhHHHhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence            9986432      11122222111111 11111211 00     1123456677788888888888765531    0   


Q ss_pred             -------CCCchHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhc
Q 036255          217 -------VADTDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQN  289 (439)
Q Consensus       217 -------~~~~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~  289 (439)
                             ....|+++.|++..+    .++++++..++..+++||+|||+.+++|++++|++||++|+++++|++++++. 
T Consensus       251 ~~~~~~~~~~~d~l~~ll~~~~----~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~~kl~~Ei~~~~~~-  325 (489)
T PLN02936        251 EGEEYVNDSDPSVLRFLLASRE----EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQG-  325 (489)
T ss_pred             ccccccccCchHHHHHHHhccc----cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcC-
Confidence                   123678888886532    48999999999999999999999999999999999999999999999999752 


Q ss_pred             CCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccce-eeeccccccCCEEeCCCCEEEeccccccCCCCCCCCCCCCCCC
Q 036255          290 DGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTF-REAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPS  368 (439)
Q Consensus       290 ~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~-r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~  368 (439)
                          ..++++++++||||+|||+||||++||++.+. |.+.+|+.++||.||+||+|+++.+++||||++|+||++|+||
T Consensus       326 ----~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~~~~dP~~F~Pe  401 (489)
T PLN02936        326 ----RPPTYEDIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEVWERAEEFVPE  401 (489)
T ss_pred             ----CCCCHHHHhhCHHHHHHHHHhhhcCCCcccccceeccCccccCCeEECCCCEEEecHHhccCChhhCCCccccCcc
Confidence                34789999999999999999999999999766 4456677779999999999999999999999999999999999


Q ss_pred             CCCCCC-------CCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCCC---CCccccCCCCCceEEEec
Q 036255          369 RFEIGP-------KPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNEG---YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       369 R~~~~~-------~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~~---~~~~~~p~~~~~v~~~~R  438 (439)
                      ||+.+.       .+..|+|||.|+|.|+|++||++++++++++|+++|++++.++.+.   ...+..|+++++|++++|
T Consensus       402 Rwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~R  481 (489)
T PLN02936        402 RFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIVMTTGATIHTTNGLYMTVSRR  481 (489)
T ss_pred             ccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccceecceEEeeCCCeEEEEEee
Confidence            998532       2458999999999999999999999999999999999999876543   345667889999999998


No 30 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=1.9e-65  Score=488.65  Aligned_cols=413  Identities=21%  Similarity=0.274  Sum_probs=327.5

Q ss_pred             CCccccccccccccCcchHHHHHHHhcC-CeEEEeecCceEEEecChHHHHHHHhhCCcccccc-CC-cccccccCCCcc
Q 036255           14 GLPYIGETPKLFSQNPDDFFSTRQKRYG-EIFKTHILGYKCIMLVNSEAIRYVLVTHAHLFKPT-YP-RSKERSIGPWAL   90 (439)
Q Consensus        14 ~~P~lG~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~i~~p~~~~~i~~~~~~~~~~~-~~-~~~~~~~g~~~~   90 (439)
                      ..++.|+....+ .+...++.++.++++ .+++++.++.  ++++||+.+++++..+...|... +. .....++| +++
T Consensus        48 ~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g-~gi  123 (502)
T PLN02426         48 RAYLTASWAKDF-DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG-RGI  123 (502)
T ss_pred             CCCccHHHHHhc-ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC-Cce
Confidence            357888887765 455667767888887 5888876664  89999999999998765555433 22 23445667 789


Q ss_pred             ccCCchHHHHHHHHhhhcCChHHHhhcH--HHHHHHHHHHHhhhc----C--CCcccHHHHHHHHHHHHHHHHHhcCCCc
Q 036255           91 FFHQDGYHTRMRKLVQSSLTPSMVRNSV--SCIEATAMSTLDSWS----G--GRLVNTFHEMKKFVFDVAVLSIFGHLDT  162 (439)
Q Consensus        91 ~~~~g~~~~~~R~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~----~--~~~v~~~~~~~~~~~~~~~~~~fG~~~~  162 (439)
                      ++.+|+.|+++||++.+.|+.+.+..+.  +.+++..+.++..+.    .  ++++|+.+.++.+++|+++.++||.+.+
T Consensus       124 ~~~~g~~wk~~Rk~l~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~  203 (502)
T PLN02426        124 FNVDGDSWRFQRKMASLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDPG  203 (502)
T ss_pred             eecCcHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999999998887753  455555555544432    1  3579999999999999999999998632


Q ss_pred             h-----HHHHHHHHHHHHhh-----cccccc------ccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcC-CCCchHHHH
Q 036255          163 G-----YKEILKKNYSTLDR-----GYNSFP------IYLPGSLYATSLRARRRLDQTLSEIIKERKEKS-VADTDLLAS  225 (439)
Q Consensus       163 ~-----~~~~~~~~~~~~~~-----~~~~~~------~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~-~~~~d~~~~  225 (439)
                      .     ....+.+.+..+..     .+..++      .+++....++..++.+.+.+++.++++++++.. ....|+++.
T Consensus       204 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~~~~~dll~~  283 (502)
T PLN02426        204 CLELSLPISEFADAFDTASKLSAERAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGFSASKDLLSR  283 (502)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhcccCCcchHHHH
Confidence            1     11233333332211     111111      112323345667788899999999999887643 235799999


Q ss_pred             hhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCC
Q 036255          226 LMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMP  305 (439)
Q Consensus       226 ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~  305 (439)
                      +++..      .+++++.+++.++++||+|||+.+++|++++|++||++|+++++|++++.+.   ....++.+++++||
T Consensus       284 ll~~~------~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~---~~~~~t~~~l~~Lp  354 (502)
T PLN02426        284 FMASI------NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGP---NQEAASFEEMKEMH  354 (502)
T ss_pred             HHhcC------CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCC---CCCCCCHHHHhcCh
Confidence            99753      3678999999999999999999999999999999999999999999998753   22358999999999


Q ss_pred             cHHHHHHHHhcCCCCcccceeeecccccc-CCEEeCCCCEEEeccccccCCCCCC-CCCCCCCCCCCCCC-----CCCCc
Q 036255          306 LTNKVIMESLRMASVVSYTFREAVEDVEY-KGHLIPKGWKVLPLFRNVHHNPDFF-SEPREFNPSRFEIG-----PKPNT  378 (439)
Q Consensus       306 ~l~a~i~E~lRl~p~~~~~~r~~~~~~~~-~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~-----~~~~~  378 (439)
                      ||+|||+|+||++||+|...|.+.+|.++ +|+.|||||.|.++.+++||||++| +||++|+||||+++     ..+..
T Consensus       355 Yl~avi~EtLRl~p~v~~~~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeRwl~~~~~~~~~~~~  434 (502)
T PLN02426        355 YLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPERWLKNGVFVPENPFK  434 (502)
T ss_pred             HHHHHHHHHHhCCCCCCCcceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccccCCCCCcCCCCCcc
Confidence            99999999999999999888999999887 8999999999999999999999999 99999999999863     23567


Q ss_pred             ccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC---C--CCccccCCCCCceEEEecC
Q 036255          379 FMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE---G--YEPFPIPRNGLPAKFWKLR  439 (439)
Q Consensus       379 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~---~--~~~~~~p~~~~~v~~~~R~  439 (439)
                      |+|||+|+|.|+|+++|++|++++++.|+++|++++.++..   .  ...+..|+++++|++++|+
T Consensus       435 ~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        435 YPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            99999999999999999999999999999999999864422   2  3467889999999999984


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=1.1e-63  Score=469.32  Aligned_cols=395  Identities=20%  Similarity=0.343  Sum_probs=302.2

Q ss_pred             CCCCCCCCCCCcccccccccc----ccCcchHHHHHHHhcCC-eEEEeecCceE-------EEecChHHHHHHHhh----
Q 036255            5 NPKLPPGSMGLPYIGETPKLF----SQNPDDFFSTRQKRYGE-IFKTHILGYKC-------IMLVNSEAIRYVLVT----   68 (439)
Q Consensus         5 ~~~~pPgp~~~P~lG~~~~~~----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~i~~p~~~~~i~~~----   68 (439)
                      +.+.|||+.|||++|++.+++    ..++..|+.+.++|||+ ||+++++|.+.       |+++||+.++.+|..    
T Consensus        15 ~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~   94 (480)
T PLN02648         15 PLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVD   94 (480)
T ss_pred             CCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcc
Confidence            557799999999999998754    24567999999999999 99999999655       999999999999975    


Q ss_pred             CCccccccCCcccccccCCC---ccccCCchHHHHHHHHhhhcCChHHHhhcHHHHHHHHHHHHhhhc----CCCcccHH
Q 036255           69 HAHLFKPTYPRSKERSIGPW---ALFFHQDGYHTRMRKLVQSSLTPSMVRNSVSCIEATAMSTLDSWS----GGRLVNTF  141 (439)
Q Consensus        69 ~~~~~~~~~~~~~~~~~g~~---~~~~~~g~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~v~~~  141 (439)
                      +...+...++.... ++|.+   +++..+|+.|+++|+++.+.|++ .+..+.+.+.+.+.++++.|.    .++.+|+.
T Consensus        95 ~~~~~~~~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv~  172 (480)
T PLN02648         95 KRDVFTGTYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFLFELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKAEFN  172 (480)
T ss_pred             ccccceeeeccCcc-ccCCceeeeecCCCCchHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCcccc
Confidence            44445555555555 78866   77888999999999999999994 678899999999999999994    34579999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcccc---ccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhc---
Q 036255          142 HEMKKFVFDVAVLSIFGHLDTGYKEILKKNYSTLDRGYNS---FPIYLPGSLYATSLRARRRLDQTLSEIIKERKEK---  215 (439)
Q Consensus       142 ~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~---  215 (439)
                      +.+++++++++++++||.+.+.  +.+.+.+..+...+..   ++..            ...+..++++++.++...   
T Consensus       173 ~~~~~lt~~vi~~~lfG~~~~~--~~l~~~~~~~~~~~~~~~~~p~~------------~~~l~~~~~~~i~~~~~~~~~  238 (480)
T PLN02648        173 DPLDQMAFNFLCKALTGKDPSE--TALGSDGPALIQKWLALQLAPLA------------STGLPHVLEELLLHTFPLPFF  238 (480)
T ss_pred             chHHHHHHHHHHHHHcCCCcch--hhhccchhHHHHHHHHHHhhHHH------------HcCchHHHHHHhhcccCCchh
Confidence            9999999999999999985443  2232222222111100   1110            000111111111111000   


Q ss_pred             --CCCCchH-------HHHhhcccccCCCCCChHHHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhChH-HHHHHHHHHHH
Q 036255          216 --SVADTDL-------LASLMNYKDENGEHLTDDQIVDNIIG-VLFAAHGTTASLLTWILKYMHDDRN-LLGAIRAEQKL  284 (439)
Q Consensus       216 --~~~~~d~-------~~~ll~~~~~~~~~l~~~~i~~~~~~-~~~ag~~tt~~~l~~~l~~L~~~P~-~~~~l~~Ei~~  284 (439)
                        .....++       +..+++..+.  .+++++++.++++. +.+++++|++.+++|++++|++||+ +++++++|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~ll~~~~~--~~l~~~ei~~~~l~~~~~~t~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~  316 (480)
T PLN02648        239 LVKSDYDKLYDFFRASATEALDLAEK--FGISREEALHNLLFVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRS  316 (480)
T ss_pred             hhhccHHHHHHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence              0000111       1233333222  24999999988875 4466777788899999999999995 99999999999


Q ss_pred             HHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccC----CEEeCCCCEEEeccccccCCCCCCC
Q 036255          285 IYEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYK----GHLIPKGWKVLPLFRNVHHNPDFFS  360 (439)
Q Consensus       285 ~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~----g~~Ip~G~~v~~~~~~~~~d~~~~~  360 (439)
                      +.+.   .+..++++++++||||++||+|+||+|||++++.|++.+|++++    ||.||||+.|+++.+.+||||++|+
T Consensus       317 ~~~~---~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~~r~a~~d~~l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~  393 (480)
T PLN02648        317 AVKA---GGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQYGRAREDFVIESHDAAFEIKKGEMLFGYQPLVTRDPKVFD  393 (480)
T ss_pred             Hhcc---CCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccccceecCCEEEecCCceEEECCCCEEEEChHHHhCCcccCC
Confidence            9753   23468999999999999999999999999998889999999996    7999999999999999999999999


Q ss_pred             CCCCCCCCCCCCC--CCCCccccc---------CCCccCCccHHHHHHHHHHHHHHHHhhCe-eEecCCCCC
Q 036255          361 EPREFNPSRFEIG--PKPNTFMPF---------GNGVHACPGSELAKLEMLVLLHHLVNEYR-WEIIGPNEG  420 (439)
Q Consensus       361 ~p~~F~P~R~~~~--~~~~~~~~F---------g~G~r~C~G~~~a~~~~~~~l~~ll~~~~-~~~~~~~~~  420 (439)
                      ||++|+|+||+++  .....+++|         |.|+|.|+|++||+.|+++++++|+++|+ |++.++...
T Consensus       394 dP~~F~PeRf~~~~~~~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A~~e~~~~la~Ll~~f~~~~l~~~~~~  465 (480)
T PLN02648        394 RPEEFVPDRFMGEEGEKLLKYVFWSNGRETESPTVGNKQCAGKDFVVLVARLFVAELFLRYDSFEIEVDTSG  465 (480)
T ss_pred             CcceeCCCCCCCCCccccccccccCCCcccCCCCCCCccCccHHHHHHHHHHHHHHHHHHhCEEeecCCccc
Confidence            9999999999863  223455555         56679999999999999999999999998 998776554


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=4.7e-59  Score=433.12  Aligned_cols=378  Identities=30%  Similarity=0.462  Sum_probs=313.1

Q ss_pred             cchHHHHHHHhcCCeEEEeecCce--EEEecChHHHHHHHhhCCccccccCC-----cccccccCCCccccCCchHHHHH
Q 036255           29 PDDFFSTRQKRYGEIFKTHILGYK--CIMLVNSEAIRYVLVTHAHLFKPTYP-----RSKERSIGPWALFFHQDGYHTRM  101 (439)
Q Consensus        29 ~~~~~~~~~~~yG~v~~~~~~~~~--~v~i~~p~~~~~i~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~g~~~~~~  101 (439)
                      +..+...+.+.||.++.++..++.  .+++++++++++++.++. .++....     ......+|..++++.||+.|+++
T Consensus        24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhccccceeecCCHHHHHH
Confidence            344456677889999998887765  899999999999998875 2222211     12456667555888999999999


Q ss_pred             HHHhhhcCChHHHhhcHHHHHHHHHHHHhhhcCCCcccHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhhcccc
Q 036255          102 RKLVQSSLTPSMVRNSVSCIEATAMSTLDSWSGGRLVNTFHEMKKFVFDVAVLSIFGHLDTGYKEILKKNYSTLDRGYNS  181 (439)
Q Consensus       102 R~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~  181 (439)
                      |+++++.|+++.++.+.+.+.+.+.++++.+..++.+++.+....+++++++ .+||.+..+...........+.. .. 
T Consensus       103 Rkl~~~~F~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~~~~~~~~~~~~~-~~-  179 (411)
T COG2124         103 RKLLAPAFTPRALRGYRPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIA-ELLGVPLEDRPQLLRWSDALLLR-LD-  179 (411)
T ss_pred             HHHhccccCHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHhhhhhHHHHH-HHhCCCHHHHHHHHHHHHHHHhc-cC-
Confidence            9999999999999999999999999999988323577788999999999999 99999655544333333222222 11 


Q ss_pred             ccccCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCchHHHHhhcccccCCCCCChHHHHHHHHHHHHHhhhhHHHHH
Q 036255          182 FPIYLPGSLYATSLRARRRLDQTLSEIIKERKEKSVADTDLLASLMNYKDENGEHLTDDQIVDNIIGVLFAAHGTTASLL  261 (439)
Q Consensus       182 ~~~~~p~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~d~~~~ll~~~~~~~~~l~~~~i~~~~~~~~~ag~~tt~~~l  261 (439)
                       +...+...+.+..++...+.+++.++|++++.++.  .|+++.|+.+.++++..+|++||.++++++++||+|||++++
T Consensus       180 -~~~~~~~~~~~~~~a~~~~~~~~~~li~~rR~~~~--~dlls~l~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l  256 (411)
T COG2124         180 -PDLGPEEPWRRARAARRELDAYLRALIAERRAAPR--DDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANAL  256 (411)
T ss_pred             -cccCCcccHHHHHHHHHHHHHHHHHHHHHhccCCc--ccHHHHHHHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHH
Confidence             33233334677889999999999999999995444  899999998876665579999999999999999999999999


Q ss_pred             HHHHHHhhhChHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCC
Q 036255          262 TWILKYMHDDRNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPK  341 (439)
Q Consensus       262 ~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~  341 (439)
                      +|+++.|++||++++++++|.+.                    +|++++|+|+||+|||++...|.+.+|++++|+.|||
T Consensus       257 ~~a~~~L~~~P~~~~~l~~e~~~--------------------~~~~~~v~E~LR~~ppv~~~~R~~~~d~~igg~~Ip~  316 (411)
T COG2124         257 AWALYALLRHPDQLAKLRAEPDR--------------------PLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPA  316 (411)
T ss_pred             HHHHHHHHHCchHHHHHHhCcch--------------------HHHHHHHHHHHHhCCchhccceeccCCEeeCCEEeCC
Confidence            99999999999999999998643                    5779999999999999999779999999999999999


Q ss_pred             CCEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCccCCccHHHHHHHHHHHHHHHHhhCeeEecCCCC-C
Q 036255          342 GWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGPKPNTFMPFGNGVHACPGSELAKLEMLVLLHHLVNEYRWEIIGPNE-G  420 (439)
Q Consensus       342 G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~~~~~~~~~~~-~  420 (439)
                      |+.|+++++++||||++|+||++|+|+||.     ..|+|||+|+|.|+|+.||++|++++++.||++|++....+.. .
T Consensus       317 G~~V~~~~~~anrDp~~f~~P~~F~p~R~~-----~~~l~FG~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~~~~~  391 (411)
T COG2124         317 GTVVLLSIGAANRDPEVFPDPDEFDPERFN-----NAHLPFGGGPHRCLGAALARLELKVALAELLRRFPLLLLAEPPPL  391 (411)
T ss_pred             CCEEEecHhhhcCChhhCCChhhcCCCCCC-----CCCcCCCCCCccccCHHHHHHHHHHHHHHHHHhCchhhcCCCCCc
Confidence            999999999999999999999999999985     8999999999999999999999999999999999977666522 2


Q ss_pred             -CCccccCCCCCceEEEec
Q 036255          421 -YEPFPIPRNGLPAKFWKL  438 (439)
Q Consensus       421 -~~~~~~p~~~~~v~~~~R  438 (439)
                       ...+..|.....+.++.|
T Consensus       392 ~~~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         392 VRRPTLVPRGGERLPVRRR  410 (411)
T ss_pred             cccccccCCCcceeeeecC
Confidence             556667777777777665


No 33 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=57.52  E-value=11  Score=23.87  Aligned_cols=21  Identities=14%  Similarity=0.398  Sum_probs=17.0

Q ss_pred             HHHHHHhhhChHHHHHHHHHH
Q 036255          262 TWILKYMHDDRNLLGAIRAEQ  282 (439)
Q Consensus       262 ~~~l~~L~~~P~~~~~l~~Ei  282 (439)
                      .-++.+|.+||++.+++.+.-
T Consensus         3 Q~iV~YLv~nPevl~kl~~g~   23 (57)
T PF05952_consen    3 QEIVNYLVQNPEVLEKLKEGE   23 (57)
T ss_pred             HHHHHHHHHChHHHHHHHcCC
Confidence            346789999999999997753


No 34 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=52.13  E-value=6.4  Score=24.31  Aligned_cols=10  Identities=40%  Similarity=1.052  Sum_probs=8.7

Q ss_pred             ccCCCccCCc
Q 036255          381 PFGNGVHACP  390 (439)
Q Consensus       381 ~Fg~G~r~C~  390 (439)
                      +||.|.|.|-
T Consensus        13 kfg~GsrsC~   22 (56)
T KOG3506|consen   13 KFGQGSRSCR   22 (56)
T ss_pred             ccCCCCccee
Confidence            6999999984


No 35 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=45.30  E-value=18  Score=27.53  Aligned_cols=23  Identities=17%  Similarity=0.541  Sum_probs=16.8

Q ss_pred             cCCccHHHHHHHHHHHHHHHHhh
Q 036255          387 HACPGSELAKLEMLVLLHHLVNE  409 (439)
Q Consensus       387 r~C~G~~~a~~~~~~~l~~ll~~  409 (439)
                      -.|.|++||+..+-.+|.+|+..
T Consensus        18 yN~~gKKFsE~QiN~FIs~lIts   40 (148)
T PF09201_consen   18 YNCLGKKFSETQINAFISHLITS   40 (148)
T ss_dssp             EETTS----HHHHHHHHHHHHHS
T ss_pred             ecccchHHHHHHHHHHHHHHhcC
Confidence            38999999999999999999863


No 36 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=43.90  E-value=20  Score=29.84  Aligned_cols=43  Identities=21%  Similarity=0.212  Sum_probs=31.3

Q ss_pred             CCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEe
Q 036255          304 MPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLP  347 (439)
Q Consensus       304 l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~  347 (439)
                      -..+.|||.|+.-...-.. +-=+..+|+.++|..|||||.+.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~-vrlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSR-VRLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCE-EEEEEcCceEECCEEeCCCCEEEE
Confidence            4456889999877644321 222556899999999999998865


No 37 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=40.91  E-value=1.1e+02  Score=22.38  Aligned_cols=62  Identities=16%  Similarity=0.170  Sum_probs=40.5

Q ss_pred             CCCCCCCCCCccccccccccccCcchHHHHHHHhcCCeEEEeecC------ceEEEecChHHHHHHHhhCC
Q 036255            6 PKLPPGSMGLPYIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILG------YKCIMLVNSEAIRYVLVTHA   70 (439)
Q Consensus         6 ~~~pPgp~~~P~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~------~~~v~i~~p~~~~~i~~~~~   70 (439)
                      .+.||-...+-++-|++.-.   ..+-+.++.-+||.|..+++|.      .-+||-.|-.+++....+-+
T Consensus        11 ~rlppevnriLyirNLp~~I---TseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dhls   78 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPFKI---TSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDHLS   78 (124)
T ss_pred             CCCChhhheeEEEecCCccc---cHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHHhc
Confidence            35555555666666664222   2344667889999999998864      45677777777777765533


No 38 
>PHA03162 hypothetical protein; Provisional
Probab=39.21  E-value=19  Score=27.13  Aligned_cols=24  Identities=17%  Similarity=0.415  Sum_probs=20.9

Q ss_pred             CCCccCCccHHHHHHHHHHHHHHH
Q 036255          383 GNGVHACPGSELAKLEMLVLLHHL  406 (439)
Q Consensus       383 g~G~r~C~G~~~a~~~~~~~l~~l  406 (439)
                      +.|.+.|||+...+-++..=|+.|
T Consensus         2 ~~~~k~~pk~~~tmEeLaaeL~kL   25 (135)
T PHA03162          2 AGGSKKCPKAQPTMEDLAAEIAKL   25 (135)
T ss_pred             CCCcCCCCccCCCHHHHHHHHHHH
Confidence            469999999999999998887776


No 39 
>PF09926 DUF2158:  Uncharacterized small protein (DUF2158);  InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function. 
Probab=38.54  E-value=33  Score=21.46  Aligned_cols=18  Identities=11%  Similarity=0.178  Sum_probs=15.8

Q ss_pred             cCCeEEEeecCceEEEec
Q 036255           40 YGEIFKTHILGYKCIMLV   57 (439)
Q Consensus        40 yG~v~~~~~~~~~~v~i~   57 (439)
                      -|+|++++.||+.++|..
T Consensus         3 ~GDvV~LKSGGp~MTV~~   20 (53)
T PF09926_consen    3 IGDVVQLKSGGPRMTVTE   20 (53)
T ss_pred             CCCEEEEccCCCCeEEEE
Confidence            489999999999998874


No 40 
>PF13893 RRM_5:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=36.74  E-value=1e+02  Score=18.96  Aligned_cols=34  Identities=15%  Similarity=0.289  Sum_probs=24.4

Q ss_pred             HHHHHhcCCeEEEeecC----ceEEEecChHHHHHHHh
Q 036255           34 STRQKRYGEIFKTHILG----YKCIMLVNSEAIRYVLV   67 (439)
Q Consensus        34 ~~~~~~yG~v~~~~~~~----~~~v~i~~p~~~~~i~~   67 (439)
                      .++..+||+|..+.+..    .-.|-..+.++++....
T Consensus         2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~   39 (56)
T PF13893_consen    2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE   39 (56)
T ss_dssp             HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred             hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence            46778999998887744    34666668888888774


No 41 
>KOG4189 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.04  E-value=2.1e+02  Score=23.52  Aligned_cols=48  Identities=13%  Similarity=0.124  Sum_probs=38.8

Q ss_pred             ChHHHHHHHHHHHHHhhhhHH--HHHHHHHHHhhhChHHHHHHHHHHHHH
Q 036255          238 TDDQIVDNIIGVLFAAHGTTA--SLLTWILKYMHDDRNLLGAIRAEQKLI  285 (439)
Q Consensus       238 ~~~~i~~~~~~~~~ag~~tt~--~~l~~~l~~L~~~P~~~~~l~~Ei~~~  285 (439)
                      +-.+++..+.+-.+|-+++-+  .+..-++|-|-+.|+.+.+++++++..
T Consensus       129 s~~diakesYd~~lakhHsW~IRtAV~~amYtLPTR~~lL~~Lk~d~~~~  178 (209)
T KOG4189|consen  129 SLKDIAKESYDKTLAKHHSWAIRTAVAAAMYTLPTRPELLCRLKEDMDAA  178 (209)
T ss_pred             hhhHHHHHHHHHhhhccccHHHHHHHHHHHHhCCCcHHHHHHHHhHHHHH
Confidence            456777777887888787743  466778999999999999999998766


No 42 
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=33.62  E-value=1.2e+02  Score=23.64  Aligned_cols=39  Identities=10%  Similarity=0.332  Sum_probs=30.7

Q ss_pred             chHHHHHHHhcCCeEEEeec---------CceEEEecChHHHHHHHhh
Q 036255           30 DDFFSTRQKRYGEIFKTHIL---------GYKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        30 ~~~~~~~~~~yG~v~~~~~~---------~~~~v~i~~p~~~~~i~~~   68 (439)
                      ..-+.++.++||+|..+.+.         +.-+|-..++++++.++..
T Consensus        48 e~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~   95 (144)
T PLN03134         48 DASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE   95 (144)
T ss_pred             HHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence            35578888999998887663         4567888899999999864


No 43 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=33.43  E-value=74  Score=24.27  Aligned_cols=42  Identities=19%  Similarity=0.243  Sum_probs=31.7

Q ss_pred             cCcchHHHHHHHhcCCeEEEeecCceEEEecChHHHHHHHhhCC
Q 036255           27 QNPDDFFSTRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVTHA   70 (439)
Q Consensus        27 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~~~   70 (439)
                      .+....+++|.++||.+--..  +...+...|++.++++..++.
T Consensus        74 ~~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~~  115 (129)
T PF13625_consen   74 QNVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADPE  115 (129)
T ss_pred             HHHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhChh
Confidence            344467899999999876642  466778889999999986654


No 44 
>COG4383 Mu-like prophage protein gp29 [Function unknown]
Probab=32.96  E-value=1.2e+02  Score=27.95  Aligned_cols=101  Identities=15%  Similarity=0.171  Sum_probs=52.7

Q ss_pred             cCCCcHHHHHHHHhcCCCCcccceeeeccccccCCEEeCCCCEEEeccccccCCCCCC-CCCCCCCCCCCCCCCCCCccc
Q 036255          302 KNMPLTNKVIMESLRMASVVSYTFREAVEDVEYKGHLIPKGWKVLPLFRNVHHNPDFF-SEPREFNPSRFEIGPKPNTFM  380 (439)
Q Consensus       302 ~~l~~l~a~i~E~lRl~p~~~~~~r~~~~~~~~~g~~Ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~R~~~~~~~~~~~  380 (439)
                      .++|.++.+|...+=--.-.  ..-.-.+-..++|.++|++        ..||++..| -|++.=.--|--+.+.-.++.
T Consensus       112 e~~~~~edmifD~~DAv~~G--fs~~EiE~~~~ggl~l~rn--------~~~R~~~wF~~~~~d~~~Lr~rd~peG~~l~  181 (517)
T COG4383         112 ESLPWLEDMIFDLTDAVGHG--FSCLEIEWGFSGGLYLPRN--------FIHRPQGWFKWDKDDGLLLRLRDNPEGEALW  181 (517)
T ss_pred             hccchHHHHHHHHHHHHhcC--cceeeeehhhcCceeechh--------eeccCcccccccccccceeecccCCcchhhc
Confidence            35667777776654321111  1111223455688999987        467887777 455443333332334456788


Q ss_pred             ccCCCc---cCCccHHHHHHHH-HHHHHHHHhhCee
Q 036255          381 PFGNGV---HACPGSELAKLEM-LVLLHHLVNEYRW  412 (439)
Q Consensus       381 ~Fg~G~---r~C~G~~~a~~~~-~~~l~~ll~~~~~  412 (439)
                      |||.=.   |+--|..-..-.+ .++...|++||.+
T Consensus       182 ~fGWvvH~~rsrsg~~~r~GLvRTLvWpyiFKnYsV  217 (517)
T COG4383         182 PFGWVVHTQRSRSGYLARNGLVRTLVWPYIFKNYSV  217 (517)
T ss_pred             ccceeEEeeecccchhhccchhhhhhhHHHhccccH
Confidence            888542   2333433333333 2344556666654


No 45 
>PF14483 Cut8_M:  Cut8 dimerisation domain; PDB: 3Q5W_A 3Q5X_A.
Probab=32.86  E-value=73  Score=18.28  Aligned_cols=20  Identities=20%  Similarity=0.313  Sum_probs=12.8

Q ss_pred             HHHHHHHhh-hChHHHHHHHH
Q 036255          261 LTWILKYMH-DDRNLLGAIRA  280 (439)
Q Consensus       261 l~~~l~~L~-~~P~~~~~l~~  280 (439)
                      +..++..++ +||++++.++.
T Consensus        15 L~~lL~~l~~~HPei~~~i~~   35 (38)
T PF14483_consen   15 LQSLLQSLCERHPEIQQEIRS   35 (38)
T ss_dssp             HHHHHHHHHHHSTHHHHHHHT
T ss_pred             HHHHHHHHHHhChhHHHHHHh
Confidence            334444444 79999887764


No 46 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=31.93  E-value=1.2e+02  Score=18.47  Aligned_cols=42  Identities=14%  Similarity=0.062  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHH
Q 036255          241 QIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQ  282 (439)
Q Consensus       241 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei  282 (439)
                      ++...+..++-.|.+-.+-.+.--+.+.--||+....+-.|+
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~el   47 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKEL   47 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHh
Confidence            455566666666777666666666777777888777766554


No 47 
>PF08776 VASP_tetra:  VASP tetramerisation domain;  InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=31.53  E-value=1.1e+02  Score=17.73  Aligned_cols=28  Identities=21%  Similarity=0.358  Sum_probs=19.5

Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCCCCCHhhhcCCCcHHHHHHHHhc
Q 036255          272 RNLLGAIRAEQKLIYEQNDGEKRGLTLAQTKNMPLTNKVIMESLR  316 (439)
Q Consensus       272 P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~~l~a~i~E~lR  316 (439)
                      .|+.+.+|.|+..+-..                 .++|+..|-.|
T Consensus        10 qEIL~EvrkEl~K~K~E-----------------IIeA~~~eL~r   37 (40)
T PF08776_consen   10 QEILEEVRKELQKVKEE-----------------IIEAIRQELSR   37 (40)
T ss_dssp             HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH-----------------HHHHHHHHHhc
Confidence            56778888888887543                 35777777655


No 48 
>PRK02302 hypothetical protein; Provisional
Probab=28.07  E-value=1.9e+02  Score=20.41  Aligned_cols=34  Identities=21%  Similarity=0.311  Sum_probs=26.5

Q ss_pred             HHHHhcCCeEEEeecCceEEEecChHHHHHHHhh
Q 036255           35 TRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        35 ~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~   68 (439)
                      +..++||+|..++--..-.++-+|-+.+.++...
T Consensus        21 r~LrkfG~I~Y~Skk~kYvvlYvn~~~~e~~~~k   54 (89)
T PRK02302         21 RKLSKYGDIVYHSKRSRYLVLYVNKEDVEQKLEE   54 (89)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3468999999886655677777899999988754


No 49 
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.85  E-value=2.1e+02  Score=20.06  Aligned_cols=35  Identities=9%  Similarity=0.315  Sum_probs=26.9

Q ss_pred             HHHHHhcCCeEEEeecCceEEEecChHHHHHHHhh
Q 036255           34 STRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        34 ~~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~   68 (439)
                      .+..++||+|...+--..-.++-+|-+++..++..
T Consensus        19 aRqLrkfG~v~Y~Skk~kY~vlYvn~~~ve~~~~k   53 (90)
T COG4471          19 ARQLRKFGDVHYVSKKSKYVVLYVNEQDVEQIVEK   53 (90)
T ss_pred             hHHHHhcCCEEEEecceeEEEEEECHHHHHHHHHH
Confidence            34568999999886655667777888999988754


No 50 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=26.82  E-value=20  Score=28.62  Aligned_cols=31  Identities=26%  Similarity=0.523  Sum_probs=24.8

Q ss_pred             CCCCCCCCC-----CCCCCcccccCCCccCCccHHH
Q 036255          364 EFNPSRFEI-----GPKPNTFMPFGNGVHACPGSEL  394 (439)
Q Consensus       364 ~F~P~R~~~-----~~~~~~~~~Fg~G~r~C~G~~~  394 (439)
                      +|+|++|-.     +.+..+.+-|..|+=.|-|.+=
T Consensus        36 eYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaKs   71 (185)
T COG2101          36 EYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAKS   71 (185)
T ss_pred             ccCHhHCCeeEEEecCCcceEEEEecCcEEEeccCc
Confidence            789999943     3456678889999999999764


No 51 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=26.35  E-value=43  Score=27.97  Aligned_cols=21  Identities=24%  Similarity=0.675  Sum_probs=18.5

Q ss_pred             cccccCCCCCCCCCCCCCCCC
Q 036255          349 FRNVHHNPDFFSEPREFNPSR  369 (439)
Q Consensus       349 ~~~~~~d~~~~~~p~~F~P~R  369 (439)
                      .+.-|.|+.+|.|...|+|-|
T Consensus       191 W~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  191 WWPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCCcccccCccccCCCC
Confidence            455699999999999999988


No 52 
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=25.83  E-value=1.3e+02  Score=24.39  Aligned_cols=46  Identities=11%  Similarity=0.263  Sum_probs=30.0

Q ss_pred             cccccccccccCcchHHHHHHHhcCCeEEEee----cCceEEEecChHHHHHH
Q 036255           17 YIGETPKLFSQNPDDFFSTRQKRYGEIFKTHI----LGYKCIMLVNSEAIRYV   65 (439)
Q Consensus        17 ~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~----~~~~~v~i~~p~~~~~i   65 (439)
                      ++|||..-   -...-++....+||++..+|+    +|.-+|-+-||.++...
T Consensus        14 YVGnL~~~---a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DA   63 (195)
T KOG0107|consen   14 YVGNLGSR---ATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDA   63 (195)
T ss_pred             EeccCCCC---cchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHH
Confidence            46665322   123447888899999999988    45566777776544443


No 53 
>PRK02886 hypothetical protein; Provisional
Probab=25.37  E-value=2.3e+02  Score=19.89  Aligned_cols=34  Identities=6%  Similarity=0.207  Sum_probs=26.5

Q ss_pred             HHHHhcCCeEEEeecCceEEEecChHHHHHHHhh
Q 036255           35 TRQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        35 ~~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~   68 (439)
                      ...++||+|..++--..-+++-+|-+.+.++...
T Consensus        19 r~LrkyG~I~Y~Skr~kYvvlYvn~~~~e~~~~k   52 (87)
T PRK02886         19 KQLRKFGNVHYVSKRLKYAVLYCDMEQVEDIMNK   52 (87)
T ss_pred             HHHhhcCcEEEEeccccEEEEEECHHHHHHHHHH
Confidence            3468999999886555677777899999988754


No 54 
>PF00076 RRM_1:  RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain);  InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=24.45  E-value=2e+02  Score=18.28  Aligned_cols=49  Identities=16%  Similarity=0.336  Sum_probs=31.9

Q ss_pred             cccccccccccCcchHHHHHHHhcCCeEEEeecC--------ceEEEecChHHHHHHHhh
Q 036255           17 YIGETPKLFSQNPDDFFSTRQKRYGEIFKTHILG--------YKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        17 ~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~--------~~~v~i~~p~~~~~i~~~   68 (439)
                      ++||+..-.   ....+.++.++||++-.+.+..        .-+|...+.+.++.++..
T Consensus         2 ~v~nlp~~~---t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~   58 (70)
T PF00076_consen    2 YVGNLPPDV---TEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEE   58 (70)
T ss_dssp             EEESETTTS---SHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred             EEcCCCCcC---CHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHH
Confidence            355654332   2355778889999986654422        346677789999988863


No 55 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=23.87  E-value=2.6e+02  Score=19.50  Aligned_cols=50  Identities=12%  Similarity=0.091  Sum_probs=41.4

Q ss_pred             ChHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhChHHHHHHHHHHHHHHh
Q 036255          238 TDDQIVDNIIGVLFAAHGTTASLLTWILKYMHDDRNLLGAIRAEQKLIYE  287 (439)
Q Consensus       238 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~  287 (439)
                      +.+.........++-=+..++....-.+.+-++||+..+++.+.+..-+.
T Consensus        30 ~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL~   79 (87)
T PF14129_consen   30 SSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERLE   79 (87)
T ss_pred             cHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence            44555666677888889999999999999999999999999988876654


No 56 
>PF09902 DUF2129:  Uncharacterized protein conserved in bacteria (DUF2129);  InterPro: IPR016979 This is a group of uncharacterised conserved proteins.
Probab=23.16  E-value=2.1e+02  Score=19.20  Aligned_cols=33  Identities=15%  Similarity=0.314  Sum_probs=25.3

Q ss_pred             HHHhcCCeEEEeecCceEEEecChHHHHHHHhh
Q 036255           36 RQKRYGEIFKTHILGYKCIMLVNSEAIRYVLVT   68 (439)
Q Consensus        36 ~~~~yG~v~~~~~~~~~~v~i~~p~~~~~i~~~   68 (439)
                      ..++||+|..+.--..-+++-.|.+.+.++...
T Consensus        16 ~L~kfG~i~Y~Skk~kYvvlYvn~~~~e~~~~k   48 (71)
T PF09902_consen   16 QLRKFGDIHYVSKKMKYVVLYVNEEDVEEIIEK   48 (71)
T ss_pred             hHhhcccEEEEECCccEEEEEECHHHHHHHHHH
Confidence            458999999886545667777899999888744


No 57 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=21.83  E-value=63  Score=24.42  Aligned_cols=22  Identities=45%  Similarity=0.478  Sum_probs=18.3

Q ss_pred             eeeccccccCCEEeCCCCEEEe
Q 036255          326 REAVEDVEYKGHLIPKGWKVLP  347 (439)
Q Consensus       326 r~~~~~~~~~g~~Ip~G~~v~~  347 (439)
                      -++.+|..++|-.||+||.|+.
T Consensus        71 ~I~~~d~~~~g~~i~~GtWv~~   92 (122)
T PF14550_consen   71 YIAPEDMEIGGETIPKGTWVVG   92 (122)
T ss_pred             EecCCCcccCCeeecceEEEEE
Confidence            4566799999999999998853


No 58 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=21.24  E-value=64  Score=20.71  Aligned_cols=7  Identities=29%  Similarity=0.615  Sum_probs=5.0

Q ss_pred             CCCCCCC
Q 036255          366 NPSRFEI  372 (439)
Q Consensus       366 ~P~R~~~  372 (439)
                      ||||||.
T Consensus        44 DPERWLP   50 (59)
T PF08492_consen   44 DPERWLP   50 (59)
T ss_pred             CccccCc
Confidence            6777774


No 59 
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=21.23  E-value=86  Score=24.92  Aligned_cols=40  Identities=8%  Similarity=0.194  Sum_probs=29.9

Q ss_pred             ccccCcchHHHHHHHhcC-CeEEEeecCc----eEEEecChHHHH
Q 036255           24 LFSQNPDDFFSTRQKRYG-EIFKTHILGY----KCIMLVNSEAIR   63 (439)
Q Consensus        24 ~~~~~~~~~~~~~~~~yG-~v~~~~~~~~----~~v~i~~p~~~~   63 (439)
                      ++++...+..+++++++| +|..++++|.    --++++||-.+-
T Consensus       151 lMGGkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAG  195 (218)
T COG1707         151 LMGGKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAG  195 (218)
T ss_pred             cccchHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhh
Confidence            344566788999999999 8999998773    346788885544


No 60 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=20.89  E-value=52  Score=21.59  Aligned_cols=13  Identities=23%  Similarity=0.432  Sum_probs=11.3

Q ss_pred             CcHHHHHHHHhcC
Q 036255          305 PLTNKVIMESLRM  317 (439)
Q Consensus       305 ~~l~a~i~E~lRl  317 (439)
                      -+++.+|+|++|+
T Consensus        41 ~fv~~~IkEA~RF   53 (65)
T PF15300_consen   41 QFVEMIIKEAARF   53 (65)
T ss_pred             HHHHHHHHHHHHH
Confidence            4689999999997


No 61 
>COG1759 5-formaminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl    5'-monophosphate synthetase (purine biosynthesis) [Nucleotide transport and    metabolism]
Probab=20.69  E-value=1.9e+02  Score=26.05  Aligned_cols=68  Identities=15%  Similarity=0.230  Sum_probs=42.7

Q ss_pred             HHHHHHHhcCCCCcc---cce-eeeccccccC----CEEeCCCCEEEeccccccCCCCCCCCCCCCCCCCCCCCCCCCcc
Q 036255          308 NKVIMESLRMASVVS---YTF-REAVEDVEYK----GHLIPKGWKVLPLFRNVHHNPDFFSEPREFNPSRFEIGPKPNTF  379 (439)
Q Consensus       308 ~a~i~E~lRl~p~~~---~~~-r~~~~~~~~~----g~~Ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~R~~~~~~~~~~  379 (439)
                      +.+++.|..+.||.-   ++. -.++.|..+=    .-.|..||.|.++-                         +++.+
T Consensus       276 er~V~a~kel~~PG~iGpFcLq~~~t~dl~~vVfevS~Ri~gGTNv~~~G-------------------------spYs~  330 (361)
T COG1759         276 ERFVEATKELVPPGIIGPFCLQTIVTDDLEFVVFEVSARIVGGTNVYMGG-------------------------SPYSN  330 (361)
T ss_pred             HHHHHHHHHhcCCCcccceeeeeeecCCccEEEEEEeccccCCcccccCC-------------------------Ccchh
Confidence            788999999999854   222 3445554331    45778888776651                         23334


Q ss_pred             cccCCCccCCccHHHHHHHHHHHH
Q 036255          380 MPFGNGVHACPGSELAKLEMLVLL  403 (439)
Q Consensus       380 ~~Fg~G~r~C~G~~~a~~~~~~~l  403 (439)
                      +-||.+  +-.|+++|. |+|.++
T Consensus       331 l~~~~p--ms~GrRIA~-EIk~A~  351 (361)
T COG1759         331 LYWGEP--MSTGRRIAR-EIKEAI  351 (361)
T ss_pred             hhcCCC--cchhhHHHH-HHHHHH
Confidence            444433  556999998 777654


No 62 
>PTZ00218 40S ribosomal protein S29; Provisional
Probab=20.22  E-value=44  Score=20.90  Aligned_cols=15  Identities=20%  Similarity=0.656  Sum_probs=10.8

Q ss_pred             ccCCCccCCc--cHHHH
Q 036255          381 PFGNGVHACP--GSELA  395 (439)
Q Consensus       381 ~Fg~G~r~C~--G~~~a  395 (439)
                      -||.|.|.|.  |..-+
T Consensus        11 ~yGkGsr~C~vCg~~~g   27 (54)
T PTZ00218         11 TYGKGSRQCRVCSNRHG   27 (54)
T ss_pred             cCCCCCCeeecCCCcch
Confidence            3899999995  65433


Done!