Query 036258
Match_columns 331
No_of_seqs 197 out of 3610
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 10:57:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036258.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036258hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.5E-31 3.2E-36 264.6 23.9 298 25-329 27-378 (968)
2 PLN00113 leucine-rich repeat r 100.0 5.2E-31 1.1E-35 260.7 19.1 274 45-330 108-403 (968)
3 KOG4194 Membrane glycoprotein 100.0 1.3E-29 2.9E-34 220.4 5.0 278 40-330 158-439 (873)
4 KOG4194 Membrane glycoprotein 99.9 8.3E-29 1.8E-33 215.5 2.4 267 45-325 139-409 (873)
5 KOG0444 Cytoskeletal regulator 99.9 1.3E-27 2.9E-32 209.9 -0.3 257 51-327 99-358 (1255)
6 KOG0444 Cytoskeletal regulator 99.9 6.2E-27 1.3E-31 205.8 -2.4 259 54-330 6-290 (1255)
7 KOG0472 Leucine-rich repeat pr 99.9 4.4E-24 9.6E-29 178.6 -2.5 255 51-320 224-541 (565)
8 KOG0472 Leucine-rich repeat pr 99.8 1.1E-23 2.3E-28 176.3 -8.2 247 51-320 64-310 (565)
9 KOG4237 Extracellular matrix p 99.8 1.9E-22 4E-27 168.5 -3.4 259 56-320 68-359 (498)
10 PLN03210 Resistant to P. syrin 99.8 7E-19 1.5E-23 175.6 18.7 106 53-166 609-714 (1153)
11 PRK15387 E3 ubiquitin-protein 99.8 1.3E-19 2.9E-24 169.5 12.7 231 56-327 223-465 (788)
12 PLN03210 Resistant to P. syrin 99.8 2E-18 4.3E-23 172.4 19.7 160 46-214 549-715 (1153)
13 cd00116 LRR_RI Leucine-rich re 99.8 4.4E-21 9.6E-26 166.9 -1.8 265 50-319 18-319 (319)
14 PRK15370 E3 ubiquitin-protein 99.8 3.5E-19 7.5E-24 167.5 10.3 225 56-320 200-428 (754)
15 PRK15370 E3 ubiquitin-protein 99.8 4.9E-19 1.1E-23 166.5 10.0 230 55-327 178-407 (754)
16 PRK15387 E3 ubiquitin-protein 99.8 3.3E-18 7.2E-23 160.2 15.4 228 55-330 201-444 (788)
17 KOG4237 Extracellular matrix p 99.8 1.3E-20 2.7E-25 157.6 -1.9 261 58-327 49-342 (498)
18 KOG0617 Ras suppressor protein 99.7 3.9E-20 8.5E-25 138.0 -3.5 164 154-330 31-195 (264)
19 cd00116 LRR_RI Leucine-rich re 99.7 1.2E-19 2.5E-24 158.0 -1.4 258 59-321 2-292 (319)
20 KOG0618 Serine/threonine phosp 99.7 1.4E-19 2.9E-24 166.0 -3.9 242 55-318 219-487 (1081)
21 KOG0617 Ras suppressor protein 99.7 1.8E-19 3.9E-24 134.5 -5.2 161 51-219 29-189 (264)
22 KOG0618 Serine/threonine phosp 99.7 5.1E-19 1.1E-23 162.3 -4.1 247 51-321 195-466 (1081)
23 KOG1909 Ran GTPase-activating 99.4 1.8E-14 3.9E-19 119.4 -3.6 249 52-319 27-310 (382)
24 KOG1909 Ran GTPase-activating 99.3 2.1E-13 4.6E-18 113.1 -2.6 195 50-247 53-283 (382)
25 PF14580 LRR_9: Leucine-rich r 99.3 6.7E-12 1.5E-16 97.4 5.2 128 175-315 15-148 (175)
26 KOG3207 Beta-tubulin folding c 99.2 1.3E-12 2.8E-17 111.5 -0.6 136 154-296 195-339 (505)
27 KOG0532 Leucine-rich repeat (L 99.2 5.3E-13 1.2E-17 117.4 -3.6 194 103-317 74-270 (722)
28 KOG1259 Nischarin, modulator o 99.2 1.6E-12 3.4E-17 106.1 -1.2 179 52-247 211-412 (490)
29 COG4886 Leucine-rich repeat (L 99.2 3.3E-11 7.1E-16 108.0 6.5 195 59-274 97-292 (394)
30 COG4886 Leucine-rich repeat (L 99.2 2.9E-11 6.3E-16 108.4 6.1 150 157-320 141-290 (394)
31 KOG3207 Beta-tubulin folding c 99.2 3.7E-12 8E-17 108.7 -0.0 208 101-320 118-339 (505)
32 KOG0532 Leucine-rich repeat (L 99.1 1.6E-12 3.5E-17 114.4 -3.6 196 53-269 73-270 (722)
33 PF14580 LRR_9: Leucine-rich r 99.1 2.7E-11 5.8E-16 94.1 3.3 106 79-192 18-126 (175)
34 KOG1259 Nischarin, modulator o 99.1 1.1E-11 2.4E-16 101.2 0.9 128 156-296 284-412 (490)
35 KOG4658 Apoptotic ATPase [Sign 99.1 2.4E-11 5.1E-16 116.9 2.4 109 53-167 543-653 (889)
36 PF13855 LRR_8: Leucine rich r 99.1 1.4E-10 3E-15 74.3 3.6 61 55-116 1-61 (61)
37 PLN03150 hypothetical protein; 99.1 1E-09 2.2E-14 103.3 10.5 141 23-167 368-526 (623)
38 PLN03150 hypothetical protein; 99.0 3.1E-10 6.6E-15 106.8 5.8 91 236-327 420-510 (623)
39 KOG4658 Apoptotic ATPase [Sign 99.0 2.3E-10 5E-15 110.2 4.9 267 50-326 566-848 (889)
40 PF13855 LRR_8: Leucine rich r 99.0 8.4E-10 1.8E-14 70.6 4.1 60 260-319 2-61 (61)
41 KOG2982 Uncharacterized conser 98.9 1E-10 2.2E-15 95.5 -1.9 203 102-313 69-285 (418)
42 KOG0531 Protein phosphatase 1, 98.9 2.1E-10 4.5E-15 103.2 -1.3 128 54-192 71-199 (414)
43 KOG0531 Protein phosphatase 1, 98.8 4.2E-10 9.2E-15 101.2 -2.0 219 55-296 49-268 (414)
44 KOG1859 Leucine-rich repeat pr 98.6 2.2E-10 4.8E-15 103.9 -11.0 134 77-217 81-223 (1096)
45 KOG2120 SCF ubiquitin ligase, 98.5 7.4E-10 1.6E-14 90.6 -8.3 178 129-317 186-373 (419)
46 KOG2982 Uncharacterized conser 98.5 3.6E-08 7.9E-13 80.8 0.6 84 54-138 70-156 (418)
47 KOG1859 Leucine-rich repeat pr 98.5 2.4E-09 5.1E-14 97.5 -7.1 179 51-247 105-292 (1096)
48 KOG2120 SCF ubiquitin ligase, 98.4 2E-09 4.4E-14 88.1 -7.5 225 55-294 136-374 (419)
49 KOG4579 Leucine-rich repeat (L 98.4 1E-08 2.2E-13 74.5 -3.5 106 180-296 28-136 (177)
50 COG5238 RNA1 Ran GTPase-activa 98.4 4.1E-08 8.9E-13 79.5 -1.2 241 77-320 27-316 (388)
51 COG5238 RNA1 Ran GTPase-activa 98.3 1.2E-07 2.6E-12 76.9 -0.3 167 78-247 90-285 (388)
52 PRK15386 type III secretion pr 98.3 6.9E-06 1.5E-10 72.0 10.0 34 257-293 154-187 (426)
53 KOG1644 U2-associated snRNP A' 98.3 2.4E-06 5.3E-11 66.4 6.4 125 181-317 21-150 (233)
54 PF12799 LRR_4: Leucine Rich r 98.3 4.9E-07 1.1E-11 53.0 2.0 36 284-320 2-37 (44)
55 KOG4579 Leucine-rich repeat (L 98.1 1.9E-07 4.2E-12 67.9 -2.8 108 57-172 29-139 (177)
56 KOG1644 U2-associated snRNP A' 98.1 9.2E-06 2E-10 63.3 5.6 106 79-189 41-150 (233)
57 KOG3665 ZYG-1-like serine/thre 98.0 9.9E-07 2.1E-11 83.4 0.1 211 51-268 56-284 (699)
58 PF13306 LRR_5: Leucine rich r 98.0 1.9E-05 4.2E-10 58.7 5.9 86 46-135 3-88 (129)
59 PF12799 LRR_4: Leucine Rich r 97.9 1.4E-05 3.1E-10 46.8 3.1 36 157-192 2-37 (44)
60 PF13306 LRR_5: Leucine rich r 97.8 4E-05 8.8E-10 57.0 5.9 126 70-205 2-128 (129)
61 KOG3665 ZYG-1-like serine/thre 97.8 7.7E-06 1.7E-10 77.5 2.1 141 128-297 122-264 (699)
62 KOG4341 F-box protein containi 97.8 3.2E-07 6.9E-12 78.7 -6.7 136 177-318 292-437 (483)
63 PRK15386 type III secretion pr 97.7 0.00022 4.8E-09 62.8 8.9 137 51-214 48-188 (426)
64 KOG2739 Leucine-rich acidic nu 97.5 3.3E-05 7.1E-10 62.7 1.3 110 50-163 38-150 (260)
65 KOG4341 F-box protein containi 97.2 1.1E-05 2.4E-10 69.6 -5.1 136 154-294 292-437 (483)
66 KOG2739 Leucine-rich acidic nu 97.0 0.00023 5E-09 57.9 1.1 59 155-213 90-153 (260)
67 PF00560 LRR_1: Leucine Rich R 97.0 0.00032 7E-09 34.2 1.2 22 308-330 1-22 (22)
68 KOG2123 Uncharacterized conser 97.0 2E-05 4.3E-10 64.5 -5.2 98 180-289 20-123 (388)
69 KOG2123 Uncharacterized conser 97.0 2.5E-05 5.4E-10 64.0 -4.9 77 56-137 20-97 (388)
70 KOG1947 Leucine rich repeat pr 95.9 0.00058 1.3E-08 62.9 -3.9 34 285-318 403-438 (482)
71 KOG4308 LRR-containing protein 95.8 1.4E-05 3.1E-10 72.4 -14.1 138 157-297 145-304 (478)
72 KOG1947 Leucine rich repeat pr 95.7 0.0016 3.5E-08 60.0 -1.7 113 53-168 186-307 (482)
73 PF13504 LRR_7: Leucine rich r 95.4 0.0078 1.7E-07 27.1 1.0 16 308-324 2-17 (17)
74 KOG4308 LRR-containing protein 95.3 5.6E-05 1.2E-09 68.7 -12.2 188 57-247 89-303 (478)
75 PF00560 LRR_1: Leucine Rich R 95.0 0.011 2.4E-07 28.6 0.9 11 262-272 3-13 (22)
76 smart00369 LRR_TYP Leucine-ric 95.0 0.028 6E-07 28.5 2.3 23 54-77 1-23 (26)
77 smart00370 LRR Leucine-rich re 95.0 0.028 6E-07 28.5 2.3 23 54-77 1-23 (26)
78 PF13516 LRR_6: Leucine Rich r 93.2 0.0096 2.1E-07 29.6 -1.5 20 307-326 2-21 (24)
79 smart00369 LRR_TYP Leucine-ric 92.2 0.1 2.2E-06 26.3 1.6 21 306-327 1-21 (26)
80 smart00370 LRR Leucine-rich re 92.2 0.1 2.2E-06 26.3 1.6 21 306-327 1-21 (26)
81 KOG3864 Uncharacterized conser 90.6 0.018 4E-07 45.3 -3.4 34 180-213 102-135 (221)
82 smart00364 LRR_BAC Leucine-ric 90.2 0.19 4E-06 25.4 1.2 18 307-325 2-19 (26)
83 KOG0473 Leucine-rich repeat pr 87.0 0.015 3.2E-07 46.9 -6.1 80 54-137 41-120 (326)
84 KOG3864 Uncharacterized conser 86.4 0.18 3.8E-06 40.0 -0.5 80 157-243 102-185 (221)
85 KOG0473 Leucine-rich repeat pr 79.6 0.051 1.1E-06 43.9 -5.9 89 199-298 38-126 (326)
86 smart00365 LRR_SD22 Leucine-ri 74.9 2.7 5.8E-05 21.2 1.6 13 56-68 3-15 (26)
87 smart00368 LRR_RI Leucine rich 74.1 2.3 4.9E-05 21.8 1.3 15 307-321 2-16 (28)
88 KOG3763 mRNA export factor TAP 73.7 1.5 3.2E-05 40.3 0.9 16 202-217 217-232 (585)
89 KOG3763 mRNA export factor TAP 61.6 3.3 7.2E-05 38.1 0.6 68 230-297 214-284 (585)
90 smart00367 LRR_CC Leucine-rich 53.6 9 0.0002 19.0 1.2 15 306-320 1-16 (26)
91 TIGR00864 PCC polycystin catio 37.6 25 0.00055 39.4 2.6 31 61-92 1-31 (2740)
92 PF08263 LRRNT_2: Leucine rich 34.1 56 0.0012 18.4 2.7 26 26-51 2-28 (43)
93 KOG4242 Predicted myosin-I-bin 28.4 3.5E+02 0.0076 25.1 7.6 59 57-115 216-279 (553)
94 smart00446 LRRcap occurring C- 22.1 43 0.00092 16.9 0.6 14 75-88 8-21 (26)
95 TIGR00864 PCC polycystin catio 21.3 54 0.0012 37.0 1.7 32 86-117 1-32 (2740)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-31 Score=264.62 Aligned_cols=298 Identities=34% Similarity=0.539 Sum_probs=174.4
Q ss_pred ChhhHHHHHHHHHhccCCCCCCCcc------------------------------------hhcCCCCccEEEcCCCcCc
Q 036258 25 ITTDQSALLAFKAHIADPYSVLTKN------------------------------------CFYNISSLKMIRLSSNSLS 68 (331)
Q Consensus 25 ~~~~~~~l~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~L~~L~l~~~~i~ 68 (331)
.+.+..++..|+..+.+|......| .|..+++|++|++++|.+.
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 3567788899988776554433333 1456778888888888887
Q ss_pred cCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccccCccccccccccCC
Q 036258 69 GSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLP 148 (331)
Q Consensus 69 ~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~ 148 (331)
+.+|..+|..+++|++|++++|.+.+..|. +.+++|++|++++|.+.+..|..+..+++|++|++++|.. .+.++
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l---~~~~p 181 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVL---VGKIP 181 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcc---cccCC
Confidence 778887776777777777777776655443 3455666666666666555666666666666666644332 22233
Q ss_pred cchhcCCCCCcEEEcCCCCCC-CCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCC-----
Q 036258 149 STLSVSLPNLKWLALGMNKLR-TIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTT----- 222 (331)
Q Consensus 149 ~~~~~~l~~L~~L~l~~~~l~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~----- 222 (331)
..+. .+++|++|++++|.+. .+|..+..+++|+.|++++|.+.+..|..+..+++|++|++++|.+.......
T Consensus 182 ~~~~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~ 260 (968)
T PLN00113 182 NSLT-NLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLK 260 (968)
T ss_pred hhhh-hCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCC
Confidence 3222 4555555555555543 34444555555555555555554444444555555555555555443210000
Q ss_pred ------------ccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEc
Q 036258 223 ------------EWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRL 290 (331)
Q Consensus 223 ------------~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l 290 (331)
....+..+..+++|++|++++|.+.+.+|..+..+. +|+.|++++|.+.+..|..+..+++|+.|++
T Consensus 261 ~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 261 NLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQ-NLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCC-CCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 002333445555555555555555555555555444 6666666666666556666666666666666
Q ss_pred cCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccccC
Q 036258 291 QDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDLCH 329 (331)
Q Consensus 291 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~ 329 (331)
++|.+.+.+|..+..+++|+.|++++|.+++.+|+.++.
T Consensus 340 ~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~ 378 (968)
T PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCS 378 (968)
T ss_pred cCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhC
Confidence 666666666666666666777777777766666666554
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=5.2e-31 Score=260.72 Aligned_cols=274 Identities=33% Similarity=0.522 Sum_probs=188.9
Q ss_pred CCCcchhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccc
Q 036258 45 VLTKNCFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENI 124 (331)
Q Consensus 45 ~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 124 (331)
.++...|..+++|++|++++|.+.+.+|. ..+++|++|++++|.+.+..|..++.+++|++|++++|.+.+.+|..+
T Consensus 108 ~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~---~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 184 (968)
T PLN00113 108 PIPDDIFTTSSSLRYLNLSNNNFTGSIPR---GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184 (968)
T ss_pred cCChHHhccCCCCCEEECcCCccccccCc---cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhh
Confidence 34444566777777777777766655553 234555555555555554555555555555555555555544455555
Q ss_pred cCcccccccccCcccc---------------------ccccccCCcchhcCCCCCcEEEcCCCCCC-CCcccccCCCCCc
Q 036258 125 GNLSKLRSLVLGHKAH---------------------NSLHGHLPSTLSVSLPNLKWLALGMNKLR-TIPNSITNASELT 182 (331)
Q Consensus 125 ~~l~~L~~L~l~~~~~---------------------~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~~~~~~~~l~~L~ 182 (331)
.++++|++|++++|.. +.+.+.++..+. .+++|++|++.+|.+. .+|..+..+++|+
T Consensus 185 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 263 (968)
T PLN00113 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQ 263 (968)
T ss_pred hhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCC
Confidence 5555555555533322 122223333332 5555666666555554 4455555566666
Q ss_pred eeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhcccccc
Q 036258 183 LLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQ 262 (331)
Q Consensus 183 ~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 262 (331)
.|++++|.+.+..|..+..+++|++|++++|.+.. .++..+..+++|++|++++|.+.+..|..+..++ +|+
T Consensus 264 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~-------~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~ 335 (968)
T PLN00113 264 YLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSG-------EIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQ 335 (968)
T ss_pred EEECcCCeeeccCchhHhhccCcCEEECcCCeecc-------CCChhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCC
Confidence 66666666655555556666666666666666554 4566788999999999999999989999888887 999
Q ss_pred EEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccccCC
Q 036258 263 QFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 263 ~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~ 330 (331)
.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+++.+|..+..+
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~ 403 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGAC 403 (968)
T ss_pred EEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999876654
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=220.43 Aligned_cols=278 Identities=22% Similarity=0.231 Sum_probs=233.9
Q ss_pred cCCCCCCCcchhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCcccccc
Q 036258 40 ADPYSVLTKNCFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGR 119 (331)
Q Consensus 40 ~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~ 119 (331)
.|....++..+|+.-.++++|+|++|.|+ .+..+.|..+..|-+|.|+.|.++...+..|.++++|+.|+|..|++...
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iriv 236 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIV 236 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeecccccc-ccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeee
Confidence 37778888889999999999999999998 88888889999999999999999977777888899999999999999854
Q ss_pred CCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCc-ccccCCCCCceeeCcCccccccCchh
Q 036258 120 LPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIP-NSITNASELTLLELGKNSFSGLVPNT 198 (331)
Q Consensus 120 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~ 198 (331)
-.-.|.++++|+.|.+..|.+. .+.+++|..+.++++|+|..|++..+. ..+.+++.|+.|++++|.|..+.++.
T Consensus 237 e~ltFqgL~Sl~nlklqrN~I~----kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~ 312 (873)
T KOG4194|consen 237 EGLTFQGLPSLQNLKLQRNDIS----KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS 312 (873)
T ss_pred hhhhhcCchhhhhhhhhhcCcc----cccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch
Confidence 4678899999999999666655 456778889999999999999998665 67889999999999999999998899
Q ss_pred ccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCccccc---C
Q 036258 199 FGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGS---I 275 (331)
Q Consensus 199 l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~---~ 275 (331)
+..+++|+.|+|+.|.++..+++ .+..+..|++|+|+.|.+...-...|..+. +|++|+|.+|.+... .
T Consensus 313 WsftqkL~~LdLs~N~i~~l~~~-------sf~~L~~Le~LnLs~Nsi~~l~e~af~~ls-sL~~LdLr~N~ls~~IEDa 384 (873)
T KOG4194|consen 313 WSFTQKLKELDLSSNRITRLDEG-------SFRVLSQLEELNLSHNSIDHLAEGAFVGLS-SLHKLDLRSNELSWCIEDA 384 (873)
T ss_pred hhhcccceeEeccccccccCChh-------HHHHHHHhhhhcccccchHHHHhhHHHHhh-hhhhhcCcCCeEEEEEecc
Confidence 99999999999999999986544 478888999999999998744444555554 999999999988753 3
Q ss_pred CccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccccCC
Q 036258 276 PQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 276 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~ 330 (331)
...+.++++|+.|++.+|.+...--.+|.+++.|++|++.+|.+..-=|+.|..+
T Consensus 385 a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m 439 (873)
T KOG4194|consen 385 AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM 439 (873)
T ss_pred hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc
Confidence 4567889999999999999984434588999999999999999874445565543
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.95 E-value=8.3e-29 Score=215.48 Aligned_cols=267 Identities=24% Similarity=0.258 Sum_probs=213.0
Q ss_pred CCCcchhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccc
Q 036258 45 VLTKNCFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENI 124 (331)
Q Consensus 45 ~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 124 (331)
.+.+..++.++.|+.||||-|.|. .+|..-|..-.+++.|+|++|.|+...-..|..+.+|..|.|++|+++...+..|
T Consensus 139 sv~se~L~~l~alrslDLSrN~is-~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~F 217 (873)
T KOG4194|consen 139 SVTSEELSALPALRSLDLSRNLIS-EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSF 217 (873)
T ss_pred cccHHHHHhHhhhhhhhhhhchhh-cccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHh
Confidence 333345667777888888888877 7777666666788888888888887777788888888888888888886666778
Q ss_pred cCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCc-ccccCCCCCceeeCcCccccccCchhccCCC
Q 036258 125 GNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIP-NSITNASELTLLELGKNSFSGLVPNTFGNLR 203 (331)
Q Consensus 125 ~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~ 203 (331)
.++++|+.|+|..|++.-.. --.|.+++.|+.|.+..|++..+. ..|..+.++++|++..|++.......+.+++
T Consensus 218 k~L~~L~~LdLnrN~irive----~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 218 KRLPKLESLDLNRNRIRIVE----GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred hhcchhhhhhccccceeeeh----hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 88888888888666554332 223457888888888888887664 6678888999999999988877778888899
Q ss_pred CCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCC
Q 036258 204 FLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLN 283 (331)
Q Consensus 204 ~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~ 283 (331)
.|++|+++.|.|..++ +++...+++|++|+|++|.++...+..+..+. .|+.|.|++|.+....-.+|.+++
T Consensus 294 ~L~~L~lS~NaI~rih-------~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~-~Le~LnLs~Nsi~~l~e~af~~ls 365 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIH-------IDSWSFTQKLKELDLSSNRITRLDEGSFRVLS-QLEELNLSHNSIDHLAEGAFVGLS 365 (873)
T ss_pred hhhhhccchhhhheee-------cchhhhcccceeEeccccccccCChhHHHHHH-HhhhhcccccchHHHHhhHHHHhh
Confidence 9999999999888764 34477888999999999999866666766666 999999999999866677889999
Q ss_pred CCCEEEccCCCCcccC---CcCccCCCCCCeEeccCCeeeecCCc
Q 036258 284 GLIDLRLQDNDLNGTI---PTTVGRLQQLQGLFLFGNNLQGSIPS 325 (331)
Q Consensus 284 ~L~~L~l~~n~l~~~~---~~~l~~l~~L~~L~l~~n~~~~~~p~ 325 (331)
+|.+||++.|.++..+ ...|..+++|+.|.+.||++. +||.
T Consensus 366 sL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~k 409 (873)
T KOG4194|consen 366 SLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPK 409 (873)
T ss_pred hhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecch
Confidence 9999999999987533 345778999999999999998 8885
No 5
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.93 E-value=1.3e-27 Score=209.94 Aligned_cols=257 Identities=28% Similarity=0.397 Sum_probs=193.4
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
+.++..|++||||.|++. +.|..+ ..-+++-+|+|++|+|..+.-..|-++..|-+|||++|++. .+|..+..+.+|
T Consensus 99 iF~l~dLt~lDLShNqL~-EvP~~L-E~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~L 175 (1255)
T KOG0444|consen 99 IFRLKDLTILDLSHNQLR-EVPTNL-EYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSML 175 (1255)
T ss_pred hcccccceeeecchhhhh-hcchhh-hhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhh
Confidence 557889999999999998 889888 88899999999999998544445668899999999999988 788888889999
Q ss_pred cccccCccccccccccCCcchhcCCCCCcEEEcCCCCCC--CCcccccCCCCCceeeCcCccccccCchhccCCCCCCEE
Q 036258 131 RSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLR--TIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLL 208 (331)
Q Consensus 131 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~--~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L 208 (331)
++|++++|....+--. .+. .++.|++|.++++.-+ .+|..+..+.+|..++++.|.+. ..|+.+..+++|+.|
T Consensus 176 qtL~Ls~NPL~hfQLr---QLP-smtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrL 250 (1255)
T KOG0444|consen 176 QTLKLSNNPLNHFQLR---QLP-SMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRL 250 (1255)
T ss_pred hhhhcCCChhhHHHHh---cCc-cchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhhee
Confidence 9999988776654211 111 5566777777777654 67777888888888888888776 567778888888888
Q ss_pred EccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCccc-ccCCccccCCCCCCE
Q 036258 209 DLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELK-GSIPQEIGNLNGLID 287 (331)
Q Consensus 209 ~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~-~~~~~~l~~l~~L~~ 287 (331)
+|++|.|+..... .....+|++|+++.|+++ ..|.++.+++ .|+.|++.+|+++ +-+|..++.+.+|+.
T Consensus 251 NLS~N~iteL~~~--------~~~W~~lEtLNlSrNQLt-~LP~avcKL~-kL~kLy~n~NkL~FeGiPSGIGKL~~Lev 320 (1255)
T KOG0444|consen 251 NLSGNKITELNMT--------EGEWENLETLNLSRNQLT-VLPDAVCKLT-KLTKLYANNNKLTFEGIPSGIGKLIQLEV 320 (1255)
T ss_pred ccCcCceeeeecc--------HHHHhhhhhhccccchhc-cchHHHhhhH-HHHHHHhccCcccccCCccchhhhhhhHH
Confidence 8888888764332 455667778888888876 7777777776 7777777777766 235667777777777
Q ss_pred EEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccc
Q 036258 288 LRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 288 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
+..++|.+. -+|+.++.|+.|+.|.++.|++- .+|+.+
T Consensus 321 f~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaI 358 (1255)
T KOG0444|consen 321 FHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAI 358 (1255)
T ss_pred HHhhccccc-cCchhhhhhHHHHHhccccccee-echhhh
Confidence 777777776 67777777777777777777765 566544
No 6
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.92 E-value=6.2e-27 Score=205.78 Aligned_cols=259 Identities=25% Similarity=0.433 Sum_probs=151.7
Q ss_pred CCCccEEEcCCCcCc-cCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccc
Q 036258 54 ISSLKMIRLSSNSLS-GSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRS 132 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~-~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 132 (331)
++-.+-+|+++|.++ +.+|.++ ..|.+++.|.|...++. .+|+.++.+.+|++|.+++|++. .+...+..++.|+.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v-~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDV-EQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhH-HHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHH
Confidence 455667777777776 4567666 66777777777777665 66777777777777777777766 45556667777777
Q ss_pred cccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccC
Q 036258 133 LVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGN 212 (331)
Q Consensus 133 L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~ 212 (331)
+.+..|...+. .+|..+| .+..|..|++++|+++++|..+..-+++-.|++++|+|..+.-..|-++..|-+|+|++
T Consensus 83 v~~R~N~LKns--GiP~diF-~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~ 159 (1255)
T KOG0444|consen 83 VIVRDNNLKNS--GIPTDIF-RLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSN 159 (1255)
T ss_pred HhhhccccccC--CCCchhc-ccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcccc
Confidence 77765554433 4666666 67777777777777777776666666777777777777655444555566666666666
Q ss_pred CcccCccCCCccccccccccCCCCcEEEeeccccc-------------------------ccCCchhhhccccccEEEec
Q 036258 213 NYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLS-------------------------GILPPLIGNFSDSLQQFYAY 267 (331)
Q Consensus 213 ~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~-------------------------~~~~~~~~~~~~~L~~L~l~ 267 (331)
|++.. +|.....+.+|++|.|++|++. ..+|..+..+. +|..++++
T Consensus 160 NrLe~--------LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~-NL~dvDlS 230 (1255)
T KOG0444|consen 160 NRLEM--------LPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLH-NLRDVDLS 230 (1255)
T ss_pred chhhh--------cCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhh-hhhhcccc
Confidence 66653 2333444445555555554432 12333333333 44444444
Q ss_pred cCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccccCC
Q 036258 268 DCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 268 ~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~ 330 (331)
.|.+. .+|+.+-.+++|..|++++|.|+ .+.-..+...+|++|+++.|+++ .+|+++|++
T Consensus 231 ~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 231 ENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred ccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 44444 44444444445555555555544 33233333444444455555555 555555543
No 7
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.87 E-value=4.4e-24 Score=178.57 Aligned_cols=255 Identities=29% Similarity=0.438 Sum_probs=172.2
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
|+.+..|+++.+..|+|. .+|+...+.++++.+|++++|++. ..|+.+..+.+|.+||+++|.++ .+|..++++ .|
T Consensus 224 f~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL 299 (565)
T KOG0472|consen 224 FPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HL 299 (565)
T ss_pred CCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-ee
Confidence 666666777777666666 667666666777777777777765 66667777777777777777776 566667766 67
Q ss_pred cccccCcccccccc----------------------------------ccCCcchh---cCCCCCcEEEcCCCCCCCCcc
Q 036258 131 RSLVLGHKAHNSLH----------------------------------GHLPSTLS---VSLPNLKWLALGMNKLRTIPN 173 (331)
Q Consensus 131 ~~L~l~~~~~~~~~----------------------------------~~~~~~~~---~~l~~L~~L~l~~~~l~~~~~ 173 (331)
+.|.+.+|....+- +..+...| ......+.|+++.-.++.+|.
T Consensus 300 ~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPd 379 (565)
T KOG0472|consen 300 KFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPD 379 (565)
T ss_pred eehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCH
Confidence 77666663111000 00000000 022334444444444444442
Q ss_pred cccCCC---CCceeeCcCcccc-----------------------ccCchhccCCCCCCEEEccCCcccCccCCCccccc
Q 036258 174 SITNAS---ELTLLELGKNSFS-----------------------GLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFL 227 (331)
Q Consensus 174 ~~~~l~---~L~~L~l~~n~~~-----------------------~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~ 227 (331)
...... -+...+++.|++. +..|..++.+++|..|++++|.+... |
T Consensus 380 EVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln~L--------P 451 (565)
T KOG0472|consen 380 EVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLNDL--------P 451 (565)
T ss_pred HHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhhhc--------c
Confidence 221111 1344444444432 24566778888999999999988854 4
Q ss_pred cccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCC
Q 036258 228 SSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQ 307 (331)
Q Consensus 228 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 307 (331)
..+..+..|+.|+++.|.+. ..|..+.... .++.+-.++|++...-+..+.++.+|+.||+.+|.+. .+|..++++.
T Consensus 452 ~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq-~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~Lgnmt 528 (565)
T KOG0472|consen 452 EEMGSLVRLQTLNLSFNRFR-MLPECLYELQ-TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMT 528 (565)
T ss_pred hhhhhhhhhheecccccccc-cchHHHhhHH-HHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhcccc
Confidence 44677777999999999887 7888776654 7777777778887555556999999999999999999 9999999999
Q ss_pred CCCeEeccCCeee
Q 036258 308 QLQGLFLFGNNLQ 320 (331)
Q Consensus 308 ~L~~L~l~~n~~~ 320 (331)
+|++|.+.||+|.
T Consensus 529 nL~hLeL~gNpfr 541 (565)
T KOG0472|consen 529 NLRHLELDGNPFR 541 (565)
T ss_pred ceeEEEecCCccC
Confidence 9999999999998
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.84 E-value=1.1e-23 Score=176.30 Aligned_cols=247 Identities=30% Similarity=0.448 Sum_probs=197.7
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
..++..+++|.+++|.+. +.|+.+ +.+.+++.++.+.|++. .+|..++.+.+|++++.++|.+. .+++.++.+..+
T Consensus 64 l~nL~~l~vl~~~~n~l~-~lp~ai-g~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l 139 (565)
T KOG0472|consen 64 LKNLACLTVLNVHDNKLS-QLPAAI-GELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDL 139 (565)
T ss_pred hhcccceeEEEeccchhh-hCCHHH-HHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhh
Confidence 667788888888888887 888877 77888888888888876 77888888888888888888887 677788888888
Q ss_pred cccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEc
Q 036258 131 RSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDL 210 (331)
Q Consensus 131 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l 210 (331)
+.++..+|.+. .+|.+++ .+.++..+++.+|.+..+|+..-.++.|++++.-.|.+. ..|..++.+.+|+-|++
T Consensus 140 ~dl~~~~N~i~----slp~~~~-~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL 213 (565)
T KOG0472|consen 140 EDLDATNNQIS----SLPEDMV-NLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYL 213 (565)
T ss_pred hhhhccccccc----cCchHHH-HHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHh
Confidence 88888666665 3444444 677788888888888877766666888888888888776 45666888888888888
Q ss_pred cCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEc
Q 036258 211 GNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRL 290 (331)
Q Consensus 211 ~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l 290 (331)
..|++...+ .|..+..|++|.+..|++. .+|....+..+++..||+.+|+++ +.|+.+.-+.+|..||+
T Consensus 214 ~~Nki~~lP---------ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDl 282 (565)
T KOG0472|consen 214 RRNKIRFLP---------EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDL 282 (565)
T ss_pred hhcccccCC---------CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcc
Confidence 888887543 3778888888888888886 666666544448888899888888 78888888888889999
Q ss_pred cCCCCcccCCcCccCCCCCCeEeccCCeee
Q 036258 291 QDNDLNGTIPTTVGRLQQLQGLFLFGNNLQ 320 (331)
Q Consensus 291 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 320 (331)
++|.|+ .+|-.++.+ +|+.|.+.||++.
T Consensus 283 SNN~is-~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 283 SNNDIS-SLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cCCccc-cCCcccccc-eeeehhhcCCchH
Confidence 999888 778888888 7888888888875
No 9
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.82 E-value=1.9e-22 Score=168.47 Aligned_cols=259 Identities=25% Similarity=0.283 Sum_probs=191.7
Q ss_pred CccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccC-ccccccCCccccCcccccccc
Q 036258 56 SLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEH-NKFTGRLPENIGNLSKLRSLV 134 (331)
Q Consensus 56 ~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~-n~~~~~~~~~~~~l~~L~~L~ 134 (331)
.-+++.|..|+|+ .||+..|+.+++|++|+|++|.|+.+.|++|.++++|..|.+.+ |+|+......|.++..++.|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 5678889999998 99999999999999999999999989999999999988888777 888865557788999999998
Q ss_pred cCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcc-cccCCCCCceeeCcCcccc------------ccCchhccC
Q 036258 135 LGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPN-SITNASELTLLELGKNSFS------------GLVPNTFGN 201 (331)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~-~~~~l~~L~~L~l~~n~~~------------~~~~~~l~~ 201 (331)
+.-+..+ .+...++..++++..|.+..|.+..++. .+..+..++.+.+..|.+. ...+.++++
T Consensus 147 lNan~i~----Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsg 222 (498)
T KOG4237|consen 147 LNANHIN----CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSG 222 (498)
T ss_pred cChhhhc----chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccc
Confidence 8433333 4556677788999999999998887774 7888888888888777621 112223333
Q ss_pred CCCCCEEEccCCcccCccCCC------------------cc-ccccccccCCCCcEEEeecccccccCCchhhhcccccc
Q 036258 202 LRFLSLLDLGNNYLTTRSSTT------------------EW-SFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQ 262 (331)
Q Consensus 202 ~~~L~~L~l~~~~l~~~~~~~------------------~~-~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 262 (331)
++-..-..+...++.+..... .. .-...|..+++|++|++++|+++.+-+.+|.... .++
T Consensus 223 arc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a-~l~ 301 (498)
T KOG4237|consen 223 ARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA-ELQ 301 (498)
T ss_pred ceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh-hhh
Confidence 332222222222222211000 00 0112367788999999999999877777877776 899
Q ss_pred EEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeee
Q 036258 263 QFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQ 320 (331)
Q Consensus 263 ~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 320 (331)
.|.|..|++...-...|.++.+|+.|++.+|.|+-..|.+|..+.+|.+|++-.|++.
T Consensus 302 eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 302 ELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 9999999887555667888888999999999998777788888888999998888764
No 10
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.81 E-value=7e-19 Score=175.55 Aligned_cols=106 Identities=26% Similarity=0.321 Sum_probs=70.7
Q ss_pred CCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccc
Q 036258 53 NISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRS 132 (331)
Q Consensus 53 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 132 (331)
...+|++|+++++.+. .++.++ ..+++|+.|+++++.....+| .++.+++|++|++++|.....+|..+..+++|+.
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~-~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~ 685 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGV-HSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLED 685 (1153)
T ss_pred CccCCcEEECcCcccc-cccccc-ccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCE
Confidence 4578888888888887 677666 678888888888765444555 3677888888888887554567777788888888
Q ss_pred cccCccccccccccCCcchhcCCCCCcEEEcCCC
Q 036258 133 LVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMN 166 (331)
Q Consensus 133 L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~ 166 (331)
|+++++. ....+|... .+++|++|++++|
T Consensus 686 L~L~~c~---~L~~Lp~~i--~l~sL~~L~Lsgc 714 (1153)
T PLN03210 686 LDMSRCE---NLEILPTGI--NLKSLYRLNLSGC 714 (1153)
T ss_pred EeCCCCC---CcCccCCcC--CCCCCCEEeCCCC
Confidence 8885422 122333322 3455555555544
No 11
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=1.3e-19 Score=169.48 Aligned_cols=231 Identities=27% Similarity=0.314 Sum_probs=128.6
Q ss_pred CccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCccccccccc
Q 036258 56 SLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVL 135 (331)
Q Consensus 56 ~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 135 (331)
+|+.|++.+|.++ .+|. .+++|++|++++|+++ .+|.. .++|+.|++++|.++ .+|.. ..+|+.|++
T Consensus 223 ~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~l---p~~L~~L~L 289 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPAL---PSGLCKLWI 289 (788)
T ss_pred CCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhc---hhhcCEEEC
Confidence 3455555555544 4442 2345555555555544 22321 234444444444443 22221 123444444
Q ss_pred CccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcc
Q 036258 136 GHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYL 215 (331)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l 215 (331)
++|....+ +. ..++|+.|++++|.+..+|... ..|+.|++++|.+.. +|. -..+|++|++++|.+
T Consensus 290 s~N~Lt~L----P~----~p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~~-LP~---lp~~Lq~LdLS~N~L 354 (788)
T PRK15387 290 FGNQLTSL----PV----LPPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLTS-LPT---LPSGLQELSVSDNQL 354 (788)
T ss_pred cCCccccc----cc----cccccceeECCCCccccCCCCc---ccccccccccCcccc-ccc---cccccceEecCCCcc
Confidence 44333322 11 2355666666666666554322 234444555555442 121 113566666666666
Q ss_pred cCccCCCc------------cccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCC
Q 036258 216 TTRSSTTE------------WSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLN 283 (331)
Q Consensus 216 ~~~~~~~~------------~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~ 283 (331)
+.++.... ..++. ...+|+.|++++|.+. .+|.. ++.|+.|++++|.+. .+|..+ .
T Consensus 355 s~LP~lp~~L~~L~Ls~N~L~~LP~---l~~~L~~LdLs~N~Lt-~LP~l----~s~L~~LdLS~N~Ls-sIP~l~---~ 422 (788)
T PRK15387 355 ASLPTLPSELYKLWAYNNRLTSLPA---LPSGLKELIVSGNRLT-SLPVL----PSELKELMVSGNRLT-SLPMLP---S 422 (788)
T ss_pred CCCCCCCcccceehhhccccccCcc---cccccceEEecCCccc-CCCCc----ccCCCEEEccCCcCC-CCCcch---h
Confidence 65432100 00111 1246788888888877 44543 237888888888887 466533 4
Q ss_pred CCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccc
Q 036258 284 GLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 284 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
+|+.|++++|.++ .+|..+..+++|+.|++++|++++..|+.+
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 6778999999998 789889999999999999999998887765
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.80 E-value=2e-18 Score=172.35 Aligned_cols=160 Identities=22% Similarity=0.312 Sum_probs=105.3
Q ss_pred CCcchhcCCCCccEEEcCCCc------CccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCcccccc
Q 036258 46 LTKNCFYNISSLKMIRLSSNS------LSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGR 119 (331)
Q Consensus 46 ~~~~~~~~~~~L~~L~l~~~~------i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~ 119 (331)
+...+|.+|++|+.|.+..+. +...+|.++..-.++|+.|.+.++.+. .+|..| ...+|++|++.++.+. .
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~ 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-K 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-c
Confidence 344579999999999886543 222456655333356888888887765 566665 4678888888888776 5
Q ss_pred CCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCC-CCCCcccccCCCCCceeeCcCccccccCchh
Q 036258 120 LPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNK-LRTIPNSITNASELTLLELGKNSFSGLVPNT 198 (331)
Q Consensus 120 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~-l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 198 (331)
++..+..+++|+.|+++++. ....++. . ..+++|++|++.+|. +..+|..+..+++|+.|++++|.....+|..
T Consensus 626 L~~~~~~l~~Lk~L~Ls~~~---~l~~ip~-l-s~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~ 700 (1153)
T PLN03210 626 LWDGVHSLTGLRNIDLRGSK---NLKEIPD-L-SMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG 700 (1153)
T ss_pred cccccccCCCCCEEECCCCC---CcCcCCc-c-ccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc
Confidence 67777778888888885432 1223332 2 256788888887664 4567777777788888888776544444443
Q ss_pred ccCCCCCCEEEccCCc
Q 036258 199 FGNLRFLSLLDLGNNY 214 (331)
Q Consensus 199 l~~~~~L~~L~l~~~~ 214 (331)
+ .+++|++|++++|.
T Consensus 701 i-~l~sL~~L~Lsgc~ 715 (1153)
T PLN03210 701 I-NLKSLYRLNLSGCS 715 (1153)
T ss_pred C-CCCCCCEEeCCCCC
Confidence 3 46666667666663
No 13
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=4.4e-21 Score=166.92 Aligned_cols=265 Identities=23% Similarity=0.310 Sum_probs=185.6
Q ss_pred hhcCCCCccEEEcCCCcCcc----CCChhhhcCCCCCcEEEccCCcccc------cCCccCcCCCCCCEEEccCcccccc
Q 036258 50 CFYNISSLKMIRLSSNSLSG----SLPNDLCNRLPSLEQLVLRSNGFFG------QIPLSLSKCTQLQHLWLEHNKFTGR 119 (331)
Q Consensus 50 ~~~~~~~L~~L~l~~~~i~~----~~~~~~~~~~~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~L~l~~n~~~~~ 119 (331)
.|..+..|++|+++++.+++ .++..+ ...+.++.++++++.+.+ ..+..+..+++|++|++++|.+...
T Consensus 18 ~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l-~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~ 96 (319)
T cd00116 18 LLPKLLCLQVLRLEGNTLGEEAAKALASAL-RPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPD 96 (319)
T ss_pred HHHHHhhccEEeecCCCCcHHHHHHHHHHH-hhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChh
Confidence 45666779999999998853 233333 567889999999887651 2334567788999999999988755
Q ss_pred CCccccCccc---ccccccCcccccccccc-CCcchhcCC-CCCcEEEcCCCCCC-----CCcccccCCCCCceeeCcCc
Q 036258 120 LPENIGNLSK---LRSLVLGHKAHNSLHGH-LPSTLSVSL-PNLKWLALGMNKLR-----TIPNSITNASELTLLELGKN 189 (331)
Q Consensus 120 ~~~~~~~l~~---L~~L~l~~~~~~~~~~~-~~~~~~~~l-~~L~~L~l~~~~l~-----~~~~~~~~l~~L~~L~l~~n 189 (331)
.+..+..+.. |++|+++++........ +...+ ..+ ++|++|++.+|.++ .++..+..+++|++|++++|
T Consensus 97 ~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l-~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 97 GCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGL-KDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred HHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHH-HhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 5555555554 99999976655421111 11222 255 88999999999887 23455677788999999999
Q ss_pred ccccc----CchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhc----cccc
Q 036258 190 SFSGL----VPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNF----SDSL 261 (331)
Q Consensus 190 ~~~~~----~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~----~~~L 261 (331)
.+.+. .+..+...++|++|++++|.+...... .+...+..+++|++|++++|.+.+.....+... .+.|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~---~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L 252 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS---ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISL 252 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH---HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCc
Confidence 88742 233455667999999999987653221 344557778999999999998876444443332 1489
Q ss_pred cEEEeccCcccc----cCCccccCCCCCCEEEccCCCCccc----CCcCccCC-CCCCeEeccCCee
Q 036258 262 QQFYAYDCELKG----SIPQEIGNLNGLIDLRLQDNDLNGT----IPTTVGRL-QQLQGLFLFGNNL 319 (331)
Q Consensus 262 ~~L~l~~~~~~~----~~~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l-~~L~~L~l~~n~~ 319 (331)
++|++++|.+++ .+...+..+++|+.+++++|.+... ....+... +.|+++++.+|++
T Consensus 253 ~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 253 LTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred eEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 999999998862 3345566678899999999999853 34444445 6789999988864
No 14
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.79 E-value=3.5e-19 Score=167.52 Aligned_cols=225 Identities=29% Similarity=0.435 Sum_probs=131.5
Q ss_pred CccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCccccccccc
Q 036258 56 SLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVL 135 (331)
Q Consensus 56 ~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 135 (331)
+++.|++++|.++ .+|..+ .++|++|++++|.++ .+|..+. ++|+.|++++|.+. .+|..+. .+|+.|++
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l---~~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 200 QITTLILDNNELK-SLPENL---QGNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDL 269 (754)
T ss_pred CCcEEEecCCCCC-cCChhh---ccCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEEC
Confidence 4666666666666 566554 246666666666665 3444332 35666666666665 4454432 35666666
Q ss_pred CccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcc
Q 036258 136 GHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYL 215 (331)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l 215 (331)
++|....+ |..+ .++|+.|++++|.++.+|..+. ..|+.|++++|.+... |..+ .++|+.|++++|.+
T Consensus 270 s~N~L~~L----P~~l---~~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~L-P~~l--~~sL~~L~Ls~N~L 337 (754)
T PRK15370 270 FHNKISCL----PENL---PEELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTAL-PETL--PPGLKTLEAGENAL 337 (754)
T ss_pred cCCccCcc----cccc---CCCCcEEECCCCccccCcccch--hhHHHHHhcCCccccC-Cccc--cccceeccccCCcc
Confidence 55544432 2222 1356666776666666554332 3566666666666532 3222 24677777777766
Q ss_pred cCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCCC
Q 036258 216 TTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDL 295 (331)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l 295 (331)
+.++. .+ .++|+.|++++|++. .+|..+ +++|+.|++++|.++ .+|..+. ..|+.|++++|.+
T Consensus 338 t~LP~--------~l--~~sL~~L~Ls~N~L~-~LP~~l---p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L 400 (754)
T PRK15370 338 TSLPA--------SL--PPELQVLDVSKNQIT-VLPETL---PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNL 400 (754)
T ss_pred ccCCh--------hh--cCcccEEECCCCCCC-cCChhh---cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCc
Confidence 65322 12 256777777777776 455443 237777777777776 4555443 2567777777777
Q ss_pred cccCCcCccC----CCCCCeEeccCCeee
Q 036258 296 NGTIPTTVGR----LQQLQGLFLFGNNLQ 320 (331)
Q Consensus 296 ~~~~~~~l~~----l~~L~~L~l~~n~~~ 320 (331)
. .+|+.+.. ++.+..+++.+|+++
T Consensus 401 ~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 401 V-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred c-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 7 55554433 466777888887764
No 15
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.78 E-value=4.9e-19 Score=166.53 Aligned_cols=230 Identities=25% Similarity=0.376 Sum_probs=181.3
Q ss_pred CCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLV 134 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 134 (331)
.+.+.|++++++++ .+|..+ .+.|+.|++++|.++ .+|..+. .+|++|++++|.++ .+|..+. .+|+.|+
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~I---p~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACI---PEQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcC-cCCccc---ccCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEE
Confidence 35789999999998 888766 468999999999998 5665553 58999999999998 5676553 4799999
Q ss_pred cCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCc
Q 036258 135 LGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNY 214 (331)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~ 214 (331)
+++|....+ |..+. .+|+.|++++|++..+|..+. ++|+.|++++|.+... |..+. ++|++|++++|.
T Consensus 248 Ls~N~L~~L----P~~l~---s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~L-P~~lp--~sL~~L~Ls~N~ 315 (754)
T PRK15370 248 LSINRITEL----PERLP---SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRTL-PAHLP--SGITHLNVQSNS 315 (754)
T ss_pred CcCCccCcC----ChhHh---CCCCEEECcCCccCccccccC--CCCcEEECCCCccccC-cccch--hhHHHHHhcCCc
Confidence 987776544 44332 479999999999998887653 5899999999998853 43332 479999999999
Q ss_pred ccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCC
Q 036258 215 LTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDND 294 (331)
Q Consensus 215 l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~ 294 (331)
+..++.. + .++|+.|++++|.++ .+|..+. ++|+.|++++|++. .+|..+. ++|+.|++++|.
T Consensus 316 Lt~LP~~--------l--~~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~ 378 (754)
T PRK15370 316 LTALPET--------L--PPGLKTLEAGENALT-SLPASLP---PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNA 378 (754)
T ss_pred cccCCcc--------c--cccceeccccCCccc-cCChhhc---CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCc
Confidence 8864321 2 267999999999998 4665543 49999999999998 5776553 689999999999
Q ss_pred CcccCCcCccCCCCCCeEeccCCeeeecCCccc
Q 036258 295 LNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 295 l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
++ .+|..+. +.|+.|++++|+++ .+|..+
T Consensus 379 Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl 407 (754)
T PRK15370 379 LT-NLPENLP--AALQIMQASRNNLV-RLPESL 407 (754)
T ss_pred CC-CCCHhHH--HHHHHHhhccCCcc-cCchhH
Confidence 99 6777654 37999999999998 888654
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.78 E-value=3.3e-18 Score=160.24 Aligned_cols=228 Identities=25% Similarity=0.306 Sum_probs=158.2
Q ss_pred CCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLV 134 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 134 (331)
..-..|+++++.++ .+|..+ .++|+.|++.+|+++ .+|. ..++|++|++++|+++ .+|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l---~~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCL---PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcch---hcCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccC-cccCc---ccccceee
Confidence 45678999999998 899877 358999999999987 4564 3589999999999998 45643 46899999
Q ss_pred cCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCc
Q 036258 135 LGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNY 214 (331)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~ 214 (331)
+.+|....+. . ...+|+.|++.+|+++.+|.. .++|+.|++++|.+... |.. ...|+.|++++|.
T Consensus 269 Ls~N~L~~Lp----~----lp~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~ 333 (788)
T PRK15387 269 IFSNPLTHLP----A----LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQ 333 (788)
T ss_pred ccCCchhhhh----h----chhhcCEEECcCCcccccccc---ccccceeECCCCccccC-CCC---cccccccccccCc
Confidence 9777665433 2 235789999999999988753 47899999999998854 332 2468889999999
Q ss_pred ccCccCCCccccccccccCCCCcEEEeecccccccCCchhh----------------hccccccEEEeccCcccccCCcc
Q 036258 215 LTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIG----------------NFSDSLQQFYAYDCELKGSIPQE 278 (331)
Q Consensus 215 l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~----------------~~~~~L~~L~l~~~~~~~~~~~~ 278 (331)
+..++. ...+|+.|++++|++. .+|.... ..+.+|+.|++++|.+. .+|..
T Consensus 334 L~~LP~-----------lp~~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~LdLs~N~Lt-~LP~l 400 (788)
T PRK15387 334 LTSLPT-----------LPSGLQELSVSDNQLA-SLPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNRLT-SLPVL 400 (788)
T ss_pred cccccc-----------cccccceEecCCCccC-CCCCCCcccceehhhccccccCcccccccceEEecCCccc-CCCCc
Confidence 886432 1136778888888776 3332110 01124555556555555 34432
Q ss_pred ccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccccCC
Q 036258 279 IGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 279 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~~~~ 330 (331)
.++|+.|++++|.++ .+|.. ..+|+.|++++|+++ .+|+.++++
T Consensus 401 ---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L 444 (788)
T PRK15387 401 ---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHL 444 (788)
T ss_pred ---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhc
Confidence 235666677766666 45542 235677777788877 778776654
No 17
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.77 E-value=1.3e-20 Score=157.62 Aligned_cols=261 Identities=21% Similarity=0.260 Sum_probs=199.2
Q ss_pred cEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccccCc
Q 036258 58 KMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGH 137 (331)
Q Consensus 58 ~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 137 (331)
..++.++-+++ ++|.++ .+.-..+.|..|+|+.+.+.+|+.+++|++|||++|.|+.+.|.+|.++..+..|.+.+
T Consensus 49 ~~VdCr~~GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred ceEEccCCCcc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhc
Confidence 45777787888 899866 67788899999999988889999999999999999999999999999999999988865
Q ss_pred -cccccccccCCcchhcCCCCCcEEEcCCCCCCCCc-ccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcc
Q 036258 138 -KAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIP-NSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYL 215 (331)
Q Consensus 138 -~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l 215 (331)
|.+. +++..+|.++..++-|.+.-|.+..++ ..|..++++..|.+.+|.+..+....|..+..++.++++.|..
T Consensus 125 ~NkI~----~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ 200 (498)
T KOG4237|consen 125 NNKIT----DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPF 200 (498)
T ss_pred CCchh----hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcc
Confidence 5554 677888889999999999999888554 8899999999999999999876666889999999999998873
Q ss_pred cCccC-----CCccccccccccCCC----------------------CcEE--Eeec-ccccccCCc-hhhhccccccEE
Q 036258 216 TTRSS-----TTEWSFLSSLTNCIY----------------------LKVL--GLHS-NQLSGILPP-LIGNFSDSLQQF 264 (331)
Q Consensus 216 ~~~~~-----~~~~~~~~~~~~~~~----------------------L~~L--~l~~-n~~~~~~~~-~~~~~~~~L~~L 264 (331)
-.-.. +..-..+..++.... ++.+ .+.. +...++-|. .|..++ +|++|
T Consensus 201 icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~-~L~~l 279 (498)
T KOG4237|consen 201 ICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP-NLRKL 279 (498)
T ss_pred ccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc-cceEe
Confidence 22100 000000111111111 1111 1111 112223343 444555 99999
Q ss_pred EeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeeecCCccc
Q 036258 265 YAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 265 ~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
+|++|++++.-+.+|.+...+++|.+.+|++...-...|.++..|+.|++.+|+|+-.-|-.|
T Consensus 280 nlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF 342 (498)
T KOG4237|consen 280 NLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAF 342 (498)
T ss_pred ccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccc
Confidence 999999998889999999999999999999986555678899999999999999995444343
No 18
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.74 E-value=3.9e-20 Score=137.99 Aligned_cols=164 Identities=30% Similarity=0.526 Sum_probs=133.2
Q ss_pred CCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccC
Q 036258 154 SLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNC 233 (331)
Q Consensus 154 ~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~ 233 (331)
.+.++..|.+++|+++.+|+.+..+.+|+.|++.+|++. ..|..++.++.|+.|+++.|++.. .|..|..+
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~--------lprgfgs~ 101 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNI--------LPRGFGSF 101 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhc--------CccccCCC
Confidence 566777778888888888888888888888888888887 557778888888888888887773 56668888
Q ss_pred CCCcEEEeecccccc-cCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeE
Q 036258 234 IYLKVLGLHSNQLSG-ILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGL 312 (331)
Q Consensus 234 ~~L~~L~l~~n~~~~-~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 312 (331)
|.|+.|++++|++.. ..|-.|+.+. .++.|++++|.+- .+|..++.+.+|+.|.+.+|.+. .+|..++.+.+|++|
T Consensus 102 p~levldltynnl~e~~lpgnff~m~-tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrel 178 (264)
T KOG0617|consen 102 PALEVLDLTYNNLNENSLPGNFFYMT-TLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLREL 178 (264)
T ss_pred chhhhhhccccccccccCCcchhHHH-HHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHH
Confidence 888888888887753 3455555554 8888888888886 78888899999999999999988 888889999999999
Q ss_pred eccCCeeeecCCccccCC
Q 036258 313 FLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 313 ~l~~n~~~~~~p~~~~~~ 330 (331)
++++|+++ .+|+.+.++
T Consensus 179 hiqgnrl~-vlppel~~l 195 (264)
T KOG0617|consen 179 HIQGNRLT-VLPPELANL 195 (264)
T ss_pred hcccceee-ecChhhhhh
Confidence 99999998 888877654
No 19
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=1.2e-19 Score=158.03 Aligned_cols=258 Identities=22% Similarity=0.248 Sum_probs=182.3
Q ss_pred EEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccc----cCCccCcCCCCCCEEEccCccccc------cCCccccCcc
Q 036258 59 MIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFG----QIPLSLSKCTQLQHLWLEHNKFTG------RLPENIGNLS 128 (331)
Q Consensus 59 ~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~l~~n~~~~------~~~~~~~~l~ 128 (331)
.|+|..+.+++.--..+|..+.+|+.|+++++.++. .++..+...+++++++++++.+.. .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 467777777643334555778889999999998742 244556677889999999987762 2334567788
Q ss_pred cccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCC-----CcccccCC-CCCceeeCcCccccc----cCchh
Q 036258 129 KLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRT-----IPNSITNA-SELTLLELGKNSFSG----LVPNT 198 (331)
Q Consensus 129 ~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-----~~~~~~~l-~~L~~L~l~~n~~~~----~~~~~ 198 (331)
+|++|+++++............+... ++|++|++++|.+.. +...+..+ ++|++|++++|.+.+ .....
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRS-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhcc-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 99999997666543221111222223 569999999998862 23455666 899999999999873 23445
Q ss_pred ccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCch----hhhccccccEEEeccCccccc
Q 036258 199 FGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPL----IGNFSDSLQQFYAYDCELKGS 274 (331)
Q Consensus 199 l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~----~~~~~~~L~~L~l~~~~~~~~ 274 (331)
+..+++|++|++++|.+...... .+...+...++|++|++++|.+.+..... +... ++|++|++++|.+.+.
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~---~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~-~~L~~L~ls~n~l~~~ 236 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIR---ALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASL-KSLEVLNLGDNNLTDA 236 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHH---HHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhccc-CCCCEEecCCCcCchH
Confidence 67778999999999988742111 23344566689999999999987443333 3333 3899999999998853
Q ss_pred CCcccc-----CCCCCCEEEccCCCCcc----cCCcCccCCCCCCeEeccCCeeee
Q 036258 275 IPQEIG-----NLNGLIDLRLQDNDLNG----TIPTTVGRLQQLQGLFLFGNNLQG 321 (331)
Q Consensus 275 ~~~~l~-----~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~l~~n~~~~ 321 (331)
....+. ..+.|++|++++|.++. .+...+..+++|+++++++|.++.
T Consensus 237 ~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 237 GAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 222222 24789999999999972 334556677899999999999984
No 20
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.72 E-value=1.4e-19 Score=166.01 Aligned_cols=242 Identities=27% Similarity=0.365 Sum_probs=161.6
Q ss_pred CCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLV 134 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 134 (331)
++++.|+.+.|.+....+. ....+|++++++.+.++ .+|+.++.+.+|+.+...+|.++ .+|..+..+.+|+.|.
T Consensus 219 ~~l~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVH---PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred cchheeeeccCcceeeccc---cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 5667777777766522222 23567888888888776 55677777888888888888776 6676666777777777
Q ss_pred cCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccC--------------------------CCCCceeeCcC
Q 036258 135 LGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITN--------------------------ASELTLLELGK 188 (331)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~--------------------------l~~L~~L~l~~ 188 (331)
..+|...++ +.... .+..|++|++..|.+..+|..+.. ...|+.|.+.+
T Consensus 294 ~~~nel~yi----p~~le-~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~Lylan 368 (1081)
T KOG0618|consen 294 AAYNELEYI----PPFLE-GLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLAN 368 (1081)
T ss_pred hhhhhhhhC----CCccc-ccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhc
Confidence 755544433 33222 466777777777777655532211 12355566666
Q ss_pred ccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEecc
Q 036258 189 NSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYD 268 (331)
Q Consensus 189 n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~ 268 (331)
|.+.+..-..+.+..+|+.|+|++|++..++.. .+.++..|++|++++|.++ .+|..+..+. .|+.|...+
T Consensus 369 N~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas-------~~~kle~LeeL~LSGNkL~-~Lp~tva~~~-~L~tL~ahs 439 (1081)
T KOG0618|consen 369 NHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPAS-------KLRKLEELEELNLSGNKLT-TLPDTVANLG-RLHTLRAHS 439 (1081)
T ss_pred CcccccchhhhccccceeeeeecccccccCCHH-------HHhchHHhHHHhcccchhh-hhhHHHHhhh-hhHHHhhcC
Confidence 666654444566777788888888877765433 2667777788888888876 6667666666 777777777
Q ss_pred CcccccCCccccCCCCCCEEEccCCCCcc-cCCcCccCCCCCCeEeccCCe
Q 036258 269 CELKGSIPQEIGNLNGLIDLRLQDNDLNG-TIPTTVGRLQQLQGLFLFGNN 318 (331)
Q Consensus 269 ~~~~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~ 318 (331)
|.+. .+| .+..+++|+.+|++-|.++. .++... ..|+|++||++||.
T Consensus 440 N~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~-p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 440 NQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL-PSPNLKYLDLSGNT 487 (1081)
T ss_pred Ccee-ech-hhhhcCcceEEecccchhhhhhhhhhC-CCcccceeeccCCc
Confidence 7776 667 67888888888888888875 333333 33788888888887
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.70 E-value=1.8e-19 Score=134.48 Aligned_cols=161 Identities=29% Similarity=0.452 Sum_probs=131.6
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
+.++.+++.|.+|+|.++ .+|+.+ ..+.+|+.|++.+|+|+ .+|..++.+++|+.|++..|++. ..|.+|+.++.|
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppni-a~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNI-AELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcH-HHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 456778899999999998 888888 78999999999999997 78889999999999999999988 899999999999
Q ss_pred cccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEc
Q 036258 131 RSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDL 210 (331)
Q Consensus 131 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l 210 (331)
+.|++.+|..+.- .+|...| .+..|+.|.++.|.+..+|..++++++|+.|.+.+|.+. ..|..++.+..|+.|++
T Consensus 105 evldltynnl~e~--~lpgnff-~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhi 180 (264)
T KOG0617|consen 105 EVLDLTYNNLNEN--SLPGNFF-YMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHI 180 (264)
T ss_pred hhhhccccccccc--cCCcchh-HHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhc
Confidence 9999965554432 3444444 677788888888888888888888888888888888776 45777777778888888
Q ss_pred cCCcccCcc
Q 036258 211 GNNYLTTRS 219 (331)
Q Consensus 211 ~~~~l~~~~ 219 (331)
.+|+++..+
T Consensus 181 qgnrl~vlp 189 (264)
T KOG0617|consen 181 QGNRLTVLP 189 (264)
T ss_pred ccceeeecC
Confidence 888777644
No 22
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.69 E-value=5.1e-19 Score=162.27 Aligned_cols=247 Identities=30% Similarity=0.361 Sum_probs=196.6
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
...+.+|+.|....|++. .+. ..-++|+.|+...|.+....+ -.--.+|+++++++|.++ .+|+.+..+.+|
T Consensus 195 ls~~~~l~~l~c~rn~ls-~l~----~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nl 266 (1081)
T KOG0618|consen 195 LSNLANLEVLHCERNQLS-ELE----ISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANL 266 (1081)
T ss_pred hhhccchhhhhhhhcccc-eEE----ecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccc
Confidence 456677777777777765 433 346889999999998873332 233468999999999998 678889999999
Q ss_pred cccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccC---------
Q 036258 131 RSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGN--------- 201 (331)
Q Consensus 131 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~--------- 201 (331)
+.+...+|... .++..++ ..++|+.+...+|.+..+|.....++.|++|++..|.+....+..+..
T Consensus 267 e~l~~n~N~l~----~lp~ri~-~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln 341 (1081)
T KOG0618|consen 267 EALNANHNRLV----ALPLRIS-RITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLN 341 (1081)
T ss_pred eEecccchhHH----hhHHHHh-hhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHh
Confidence 99999766663 5666666 789999999999999999999999999999999999886432221111
Q ss_pred ----------------CCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEE
Q 036258 202 ----------------LRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFY 265 (331)
Q Consensus 202 ----------------~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~ 265 (331)
...|+.|.+++|.++. .....+.++++|+.|+|++|++.......+.++. .|+.|+
T Consensus 342 ~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd-------~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle-~LeeL~ 413 (1081)
T KOG0618|consen 342 VSSNKLSTLPSYEENNHAALQELYLANNHLTD-------SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLE-ELEELN 413 (1081)
T ss_pred hhhccccccccccchhhHHHHHHHHhcCcccc-------cchhhhccccceeeeeecccccccCCHHHHhchH-HhHHHh
Confidence 1235666666776665 4555688899999999999999844445666665 999999
Q ss_pred eccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeeee
Q 036258 266 AYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQG 321 (331)
Q Consensus 266 l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 321 (331)
|++|+++ .+|+.+..++.|+.|...+|.+. ..| .+..++.|+.+|++.|+++.
T Consensus 414 LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 414 LSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred cccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 9999998 78999999999999999999998 788 68899999999999999874
No 23
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.37 E-value=1.8e-14 Score=119.37 Aligned_cols=249 Identities=22% Similarity=0.288 Sum_probs=151.1
Q ss_pred cCCCCccEEEcCCCcCccC----CChhhhcCCCCCcEEEccCCc---ccccCC-------ccCcCCCCCCEEEccCcccc
Q 036258 52 YNISSLKMIRLSSNSLSGS----LPNDLCNRLPSLEQLVLRSNG---FFGQIP-------LSLSKCTQLQHLWLEHNKFT 117 (331)
Q Consensus 52 ~~~~~L~~L~l~~~~i~~~----~~~~~~~~~~~L~~L~L~~n~---i~~~~~-------~~~~~l~~L~~L~l~~n~~~ 117 (331)
..+..++.+++++|.+... +...+ ...++|+..++++-- ....+| +++..+++|++++||.|.+.
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L-~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVL-ASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHH-hhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4557799999999987522 22223 567788888887631 112233 23455678888888888776
Q ss_pred ccCCccc----cCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccc
Q 036258 118 GRLPENI----GNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSG 193 (331)
Q Consensus 118 ~~~~~~~----~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~ 193 (331)
...+..| .....|++|+|.+++.....+..... .+..| . .......-++|+.+..++|++..
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~---al~~l---~--------~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR---ALFEL---A--------VNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH---HHHHH---H--------HHhccCCCcceEEEEeecccccc
Confidence 4333332 34566777777666555544332111 00000 0 11223344677777777777653
Q ss_pred c----CchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCC----chhhhccccccEEE
Q 036258 194 L----VPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILP----PLIGNFSDSLQQFY 265 (331)
Q Consensus 194 ~----~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~----~~~~~~~~~L~~L~ 265 (331)
. ....|...+.|+.+.+..|.|..-+.. .+...+..+++|+.|+|.+|-++..-. ..+..++ .|+.|+
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~---al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~-~L~El~ 247 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVT---ALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWP-HLRELN 247 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhH---HHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccc-hheeec
Confidence 2 234566667788888888877654332 345567788888888888887764322 3334444 788888
Q ss_pred eccCcccccCCccc-----cCCCCCCEEEccCCCCccc----CCcCccCCCCCCeEeccCCee
Q 036258 266 AYDCELKGSIPQEI-----GNLNGLIDLRLQDNDLNGT----IPTTVGRLQQLQGLFLFGNNL 319 (331)
Q Consensus 266 l~~~~~~~~~~~~l-----~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~~ 319 (331)
+++|.+.......+ ...|+|+.|.+.+|.++.. +...+...|.|+.|++++|.+
T Consensus 248 l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 248 LGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 88888775544433 3367788888888887642 222344567788888888887
No 24
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.27 E-value=2.1e-13 Score=113.08 Aligned_cols=195 Identities=24% Similarity=0.358 Sum_probs=128.4
Q ss_pred hhcCCCCccEEEcCCCc---CccCCChhh------hcCCCCCcEEEccCCcccccCCcc----CcCCCCCCEEEccCccc
Q 036258 50 CFYNISSLKMIRLSSNS---LSGSLPNDL------CNRLPSLEQLVLRSNGFFGQIPLS----LSKCTQLQHLWLEHNKF 116 (331)
Q Consensus 50 ~~~~~~~L~~L~l~~~~---i~~~~~~~~------~~~~~~L~~L~L~~n~i~~~~~~~----~~~l~~L~~L~l~~n~~ 116 (331)
++.+.+.|++.++++-. ....+|..+ ..++|+|++|+|++|-+....+.. +.++..|++|.|.+|.+
T Consensus 53 ~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Gl 132 (382)
T KOG1909|consen 53 VLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGL 132 (382)
T ss_pred HHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCC
Confidence 57778899999998742 222445432 246889999999999774333323 36689999999999987
Q ss_pred cccCC-------------ccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCC-----CcccccCC
Q 036258 117 TGRLP-------------ENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRT-----IPNSITNA 178 (331)
Q Consensus 117 ~~~~~-------------~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-----~~~~~~~l 178 (331)
...-. ...+.-++|+.+...+|+..+.+......++...+.|+.+.+..|++.. +...+..+
T Consensus 133 g~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~ 212 (382)
T KOG1909|consen 133 GPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHC 212 (382)
T ss_pred ChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhC
Confidence 62111 1233456788888877777666655556666677788888888877751 23556777
Q ss_pred CCCceeeCcCccccc----cCchhccCCCCCCEEEccCCcccCccCCCccccccccc-cCCCCcEEEeeccccc
Q 036258 179 SELTLLELGKNSFSG----LVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLT-NCIYLKVLGLHSNQLS 247 (331)
Q Consensus 179 ~~L~~L~l~~n~~~~----~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~-~~~~L~~L~l~~n~~~ 247 (331)
++|+.|++.+|.++. .+...++.|++|+.++++.|.+..-+.. .+...+. ..|.|+.+.+.+|.++
T Consensus 213 ~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~---a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 213 PHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAI---AFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred CcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHH---HHHHHHhccCCCCceeccCcchhH
Confidence 888888888887653 2345666777788888877777653222 2222222 3466777777777665
No 25
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=6.7e-12 Score=97.43 Aligned_cols=128 Identities=26% Similarity=0.286 Sum_probs=47.8
Q ss_pred ccCCCCCceeeCcCccccccCchhcc-CCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCch
Q 036258 175 ITNASELTLLELGKNSFSGLVPNTFG-NLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPL 253 (331)
Q Consensus 175 ~~~l~~L~~L~l~~n~~~~~~~~~l~-~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~ 253 (331)
+.+..++++|++.+|.|..+ +.++ .+.+|+.|++++|.++.+. .+..+++|++|++++|.+. .+...
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~---------~l~~L~~L~~L~L~~N~I~-~i~~~ 82 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLE---------GLPGLPRLKTLDLSNNRIS-SISEG 82 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S--T---------T----TT--EEE--SS----S-CHH
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCcccc---------CccChhhhhhcccCCCCCC-ccccc
Confidence 34455778888888888754 3454 4677888888888887642 3666788888888888887 44444
Q ss_pred hhhccccccEEEeccCccccc-CCccccCCCCCCEEEccCCCCcccCCc----CccCCCCCCeEecc
Q 036258 254 IGNFSDSLQQFYAYDCELKGS-IPQEIGNLNGLIDLRLQDNDLNGTIPT----TVGRLQQLQGLFLF 315 (331)
Q Consensus 254 ~~~~~~~L~~L~l~~~~~~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~----~l~~l~~L~~L~l~ 315 (331)
+....++|+.|++++|++... ....+..+++|+.|++.+|+++. .+. .+..+|+|+.||-.
T Consensus 83 l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~-~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 83 LDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE-KKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp HHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG-STTHHHHHHHH-TT-SEETTE
T ss_pred hHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccc-hhhHHHHHHHHcChhheeCCE
Confidence 433223888888888888742 23467788999999999999884 332 34568889888754
No 26
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=1.3e-12 Score=111.52 Aligned_cols=136 Identities=24% Similarity=0.217 Sum_probs=62.4
Q ss_pred CCCCCcEEEcCCCCCC--CCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccc
Q 036258 154 SLPNLKWLALGMNKLR--TIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLT 231 (331)
Q Consensus 154 ~l~~L~~L~l~~~~l~--~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~ 231 (331)
.++.|+.|.++.|+++ .+......+++|+.|++.+|............++.|+.|+|++|.+...+ ......
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~------~~~~~~ 268 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFD------QGYKVG 268 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccc------cccccc
Confidence 3455566666666555 22233444556666666555322222222333445566666665544321 112344
Q ss_pred cCCCCcEEEeecccccccCC-ch-----hhhccccccEEEeccCcccc-cCCccccCCCCCCEEEccCCCCc
Q 036258 232 NCIYLKVLGLHSNQLSGILP-PL-----IGNFSDSLQQFYAYDCELKG-SIPQEIGNLNGLIDLRLQDNDLN 296 (331)
Q Consensus 232 ~~~~L~~L~l~~n~~~~~~~-~~-----~~~~~~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~l~ 296 (331)
.++.|+.|+++.+.+.+.-- +. ...++ +++.|++..|++.+ .....+..+++|+.|.+..|.+.
T Consensus 269 ~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~-kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 269 TLPGLNQLNLSSTGIASIAEPDVESLDKTHTFP-KLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccchhhhhccccCcchhcCCCccchhhhcccc-cceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 55555555555555442211 11 11222 55556665555531 11223344455555555555554
No 27
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.21 E-value=5.3e-13 Score=117.35 Aligned_cols=194 Identities=25% Similarity=0.397 Sum_probs=113.6
Q ss_pred CCCCCEEEccCccccccCCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCc
Q 036258 103 CTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELT 182 (331)
Q Consensus 103 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~ 182 (331)
+..-...|++.|++. .+|..+..+..|+.+.+.+|.+..+ +..+. .+..|..++++.|.+..+|..+..+ -|+
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r~i----p~~i~-~L~~lt~l~ls~NqlS~lp~~lC~l-pLk 146 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIRTI----PEAIC-NLEALTFLDLSSNQLSHLPDGLCDL-PLK 146 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccceec----chhhh-hhhHHHHhhhccchhhcCChhhhcC-cce
Confidence 344456677777777 6677776667777776655554432 22222 4555666666666666666554433 456
Q ss_pred eeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhcccccc
Q 036258 183 LLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQ 262 (331)
Q Consensus 183 ~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~ 262 (331)
.|-+++|++. ..|+.++..+.|..|+.+.|.+.. ++..+..+..|+.|.+..|.+. .+|..+..+ .|.
T Consensus 147 vli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~s--------lpsql~~l~slr~l~vrRn~l~-~lp~El~~L--pLi 214 (722)
T KOG0532|consen 147 VLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQS--------LPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL--PLI 214 (722)
T ss_pred eEEEecCccc-cCCcccccchhHHHhhhhhhhhhh--------chHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC--cee
Confidence 6666666665 345555566666666666666654 3444566666666666666665 445555544 466
Q ss_pred EEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCc---cCCCCCCeEeccCC
Q 036258 263 QFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTV---GRLQQLQGLFLFGN 317 (331)
Q Consensus 263 ~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~l~~n 317 (331)
.||++.|++. .+|-.|.+|..|+.|.|.+|++. .-|-.+ ++.+-.++|+.+-|
T Consensus 215 ~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 215 RLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred eeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 6666666665 56666666666666666666666 333322 22334555555555
No 28
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.19 E-value=1.6e-12 Score=106.07 Aligned_cols=179 Identities=24% Similarity=0.308 Sum_probs=106.4
Q ss_pred cCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccc---cCC--------------------ccCcCCCCCCE
Q 036258 52 YNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFG---QIP--------------------LSLSKCTQLQH 108 (331)
Q Consensus 52 ~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~---~~~--------------------~~~~~l~~L~~ 108 (331)
.-+++|+.+.++.|.-. .|..-. ..=|.|+++.+++..+.. ..| ..+..++.|++
T Consensus 211 ~~f~~l~~~~~s~~~~~-~i~~~~-~~kptl~t~~v~~s~~~~~~~l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Lte 288 (490)
T KOG1259|consen 211 NAFRNLKTLKFSALSTE-NIVDIE-LLKPTLQTICVHNTTIQDVPSLLPETILADPSGSEPSTSNGSALVSADTWQELTE 288 (490)
T ss_pred HHhhhhheeeeeccchh-heecee-ecCchhheeeeecccccccccccchhhhcCccCCCCCccCCceEEecchHhhhhh
Confidence 34456666666666533 332211 234566666666554321 111 11223456777
Q ss_pred EEccCccccccCCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcC
Q 036258 109 LWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGK 188 (331)
Q Consensus 109 L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~ 188 (331)
+||++|.++ .+.+++.-.|+++.|++++|++..+.. + ..+++|++|++++|.++.+...-.++-+++.|.+++
T Consensus 289 lDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v~n-----L-a~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 289 LDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTVQN-----L-AELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred ccccccchh-hhhhhhhhccceeEEeccccceeeehh-----h-hhcccceEeecccchhHhhhhhHhhhcCEeeeehhh
Confidence 777777776 566666667777777776666553321 1 256777777777777766555555666777777777
Q ss_pred ccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeeccccc
Q 036258 189 NSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLS 247 (331)
Q Consensus 189 n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 247 (331)
|.+... ..++.+-+|.+|++.+|+|... +....+.++|.|+++.+.+|++.
T Consensus 362 N~iE~L--SGL~KLYSLvnLDl~~N~Ie~l------deV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 362 NKIETL--SGLRKLYSLVNLDLSSNQIEEL------DEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred hhHhhh--hhhHhhhhheeccccccchhhH------HHhcccccccHHHHHhhcCCCcc
Confidence 766532 2345566677777777777665 33345667777777777777765
No 29
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=3.3e-11 Score=108.02 Aligned_cols=195 Identities=32% Similarity=0.419 Sum_probs=134.7
Q ss_pred EEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCC-CCCEEEccCccccccCCccccCcccccccccCc
Q 036258 59 MIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCT-QLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGH 137 (331)
Q Consensus 59 ~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 137 (331)
.++.+.+.+...+. .+ ...+.++.|++.++.+. .++....... +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~-~~-~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNIS-EL-LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCch-hh-hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 57777776632222 22 34577888888888887 4454555563 8888888888887 5666777888888888876
Q ss_pred cccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccC
Q 036258 138 KAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTT 217 (331)
Q Consensus 138 ~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~ 217 (331)
|....+. .... ..++|+.+++++|.+..+|........|+++.+++|.+. ..+..+..+.++..+.+..|.+..
T Consensus 173 N~l~~l~----~~~~-~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~ 246 (394)
T COG4886 173 NDLSDLP----KLLS-NLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED 246 (394)
T ss_pred chhhhhh----hhhh-hhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee
Confidence 6665443 2222 567888888888888888876656667888888888533 234556677777777777777664
Q ss_pred ccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCccccc
Q 036258 218 RSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGS 274 (331)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~ 274 (331)
.+..+..++.+++|++++|.+..... +.... +++.|+++++.+...
T Consensus 247 --------~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~-~l~~L~~s~n~~~~~ 292 (394)
T COG4886 247 --------LPESIGNLSNLETLDLSNNQISSISS--LGSLT-NLRELDLSGNSLSNA 292 (394)
T ss_pred --------ccchhccccccceecccccccccccc--ccccC-ccCEEeccCcccccc
Confidence 24446777778888888888873333 44444 888888888877643
No 30
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.18 E-value=2.9e-11 Score=108.36 Aligned_cols=150 Identities=33% Similarity=0.480 Sum_probs=70.7
Q ss_pred CCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCC
Q 036258 157 NLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYL 236 (331)
Q Consensus 157 ~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L 236 (331)
+|+++++.+|.+..++..+..++.|+.|++++|++... +......+.|+.|++++|.+..++. .......|
T Consensus 141 nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l-~~~~~~~~~L~~L~ls~N~i~~l~~--------~~~~~~~L 211 (394)
T COG4886 141 NLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDL-PKLLSNLSNLNNLDLSGNKISDLPP--------EIELLSAL 211 (394)
T ss_pred hcccccccccchhhhhhhhhccccccccccCCchhhhh-hhhhhhhhhhhheeccCCccccCch--------hhhhhhhh
Confidence 45555555555554444445555555555555555422 2222234455555555555553321 11223335
Q ss_pred cEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccC
Q 036258 237 KVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFG 316 (331)
Q Consensus 237 ~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 316 (331)
+++.+++|.+. ..+..+.... .+..+.+.+|++. .++..+..++.++.|++++|.++ .++. ++.+.+++.|++++
T Consensus 212 ~~l~~~~N~~~-~~~~~~~~~~-~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~ 286 (394)
T COG4886 212 EELDLSNNSII-ELLSSLSNLK-NLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSG 286 (394)
T ss_pred hhhhhcCCcce-ecchhhhhcc-cccccccCCceee-eccchhccccccceecccccccc-cccc-ccccCccCEEeccC
Confidence 55555555322 2333333333 4444444444444 22444555555555555555555 3332 45555555566655
Q ss_pred Ceee
Q 036258 317 NNLQ 320 (331)
Q Consensus 317 n~~~ 320 (331)
|.++
T Consensus 287 n~~~ 290 (394)
T COG4886 287 NSLS 290 (394)
T ss_pred cccc
Confidence 5555
No 31
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=3.7e-12 Score=108.73 Aligned_cols=208 Identities=21% Similarity=0.193 Sum_probs=132.9
Q ss_pred cCCCCCCEEEccCccccccCC--ccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCc--cccc
Q 036258 101 SKCTQLQHLWLEHNKFTGRLP--ENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIP--NSIT 176 (331)
Q Consensus 101 ~~l~~L~~L~l~~n~~~~~~~--~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~--~~~~ 176 (331)
.++.+|+++.|+++.+. ..+ .....+++++.|++++|-+..+.. ...+...+|+|+.|+++.|++.... ..-.
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~--v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~ 194 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFP--VLKIAEQLPSLENLNLSSNRLSNFISSNTTL 194 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHH--HHHHHHhcccchhcccccccccCCccccchh
Confidence 46778888888888776 222 355678888888887766655421 1233447888888888888876322 2223
Q ss_pred CCCCCceeeCcCccccc-cCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCC-chh
Q 036258 177 NASELTLLELGKNSFSG-LVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILP-PLI 254 (331)
Q Consensus 177 ~l~~L~~L~l~~n~~~~-~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~~ 254 (331)
.++.|+.|.+++|.++- ........+|+|+.|++..|....+ ......-+..|++|+|++|++.+... ...
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~-------~~~~~~i~~~L~~LdLs~N~li~~~~~~~~ 267 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILI-------KATSTKILQTLQELDLSNNNLIDFDQGYKV 267 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccce-------ecchhhhhhHHhhccccCCccccccccccc
Confidence 45778888888887752 2223345678888888888742211 11224455668888888888763322 233
Q ss_pred hhccccccEEEeccCccccc-CCcc-----ccCCCCCCEEEccCCCCcccCC--cCccCCCCCCeEeccCCeee
Q 036258 255 GNFSDSLQQFYAYDCELKGS-IPQE-----IGNLNGLIDLRLQDNDLNGTIP--TTVGRLQQLQGLFLFGNNLQ 320 (331)
Q Consensus 255 ~~~~~~L~~L~l~~~~~~~~-~~~~-----l~~l~~L~~L~l~~n~l~~~~~--~~l~~l~~L~~L~l~~n~~~ 320 (331)
..++ .|..|+++.|.+.+. +|++ ...+++|+.|++..|++. +.+ ..+..+++|+.|.+.+|.++
T Consensus 268 ~~l~-~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 268 GTLP-GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cccc-chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhccchhhhhhccccccc
Confidence 4444 788888888887753 3443 355678888888888885 222 23455677788888777765
No 32
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.14 E-value=1.6e-12 Score=114.38 Aligned_cols=196 Identities=26% Similarity=0.422 Sum_probs=139.8
Q ss_pred CCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccc
Q 036258 53 NISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRS 132 (331)
Q Consensus 53 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 132 (331)
.+.--...|++.|.+. .+|..+ ..+..|+.+.++.|.+. .+|..+.++..|.+++|+.|+++ .+|..++.++ |+.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~-~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEA-CAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHH-HHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 3444566788888877 777766 45677888888887775 67778888888888888888887 6777766654 677
Q ss_pred cccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccC
Q 036258 133 LVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGN 212 (331)
Q Consensus 133 L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~ 212 (331)
|.+++|... .++..+. ..+.|..|+.++|.+..+|..+..+.+|+.|.+..|++... |..+..++ |..||++.
T Consensus 148 li~sNNkl~----~lp~~ig-~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~l-p~El~~Lp-Li~lDfSc 220 (722)
T KOG0532|consen 148 LIVSNNKLT----SLPEEIG-LLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDL-PEELCSLP-LIRLDFSC 220 (722)
T ss_pred EEEecCccc----cCCcccc-cchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhC-CHHHhCCc-eeeeeccc
Confidence 777666655 3444454 66778888888888888888888888888888888887744 44555554 88888888
Q ss_pred CcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhcc--ccccEEEeccC
Q 036258 213 NYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFS--DSLQQFYAYDC 269 (331)
Q Consensus 213 ~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~--~~L~~L~l~~~ 269 (331)
|++.. +|..|..+..|++|.|.+|.+. ..|-.+.... --.++|+...|
T Consensus 221 Nkis~--------iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 221 NKISY--------LPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred Cceee--------cchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 88885 4555888888888888888886 4443332111 14566666666
No 33
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.14 E-value=2.7e-11 Score=94.11 Aligned_cols=106 Identities=29% Similarity=0.387 Sum_probs=22.1
Q ss_pred CCCCcEEEccCCcccccCCccCc-CCCCCCEEEccCccccccCCccccCcccccccccCccccccccccCCcchhcCCCC
Q 036258 79 LPSLEQLVLRSNGFFGQIPLSLS-KCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPN 157 (331)
Q Consensus 79 ~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~ 157 (331)
..+++.|+|.+|.|+.+ +.++ .+.+|+.|++++|.++. + +.+..++.|+.|++++|.+..+. ..+...+|+
T Consensus 18 ~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~i~----~~l~~~lp~ 89 (175)
T PF14580_consen 18 PVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISSIS----EGLDKNLPN 89 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-C----HHHHHH-TT
T ss_pred ccccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCccc----cchHHhCCc
Confidence 33445555555544422 1232 34455555555555441 1 12333334444444333333221 111113445
Q ss_pred CcEEEcCCCCCCCCc--ccccCCCCCceeeCcCcccc
Q 036258 158 LKWLALGMNKLRTIP--NSITNASELTLLELGKNSFS 192 (331)
Q Consensus 158 L~~L~l~~~~l~~~~--~~~~~l~~L~~L~l~~n~~~ 192 (331)
|++|++++|++..+. ..+..+++|+.|++.+|.+.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 555555555544322 23444555555555555554
No 34
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.13 E-value=1.1e-11 Score=101.18 Aligned_cols=128 Identities=27% Similarity=0.281 Sum_probs=66.0
Q ss_pred CCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCC
Q 036258 156 PNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIY 235 (331)
Q Consensus 156 ~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~ 235 (331)
+.|+++++++|.++.+.+...-.++++.|+++.|.+... +.+..+++|+.|++++|.+..+. .+-..+-+
T Consensus 284 q~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~--------Gwh~KLGN 353 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECV--------GWHLKLGN 353 (490)
T ss_pred hhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhHhhh--------hhHhhhcC
Confidence 345566666666665555555556666666666665433 23555556666666666555432 22334455
Q ss_pred CcEEEeecccccccCCchhhhccccccEEEeccCcccc-cCCccccCCCCCCEEEccCCCCc
Q 036258 236 LKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKG-SIPQEIGNLNGLIDLRLQDNDLN 296 (331)
Q Consensus 236 L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~-~~~~~l~~l~~L~~L~l~~n~l~ 296 (331)
+++|.+++|.+. ....+.++. +|..|++.+|+|.. .-...++++|-|+.+.+.+|++.
T Consensus 354 IKtL~La~N~iE--~LSGL~KLY-SLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 354 IKTLKLAQNKIE--TLSGLRKLY-SLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA 412 (490)
T ss_pred EeeeehhhhhHh--hhhhhHhhh-hheeccccccchhhHHHhcccccccHHHHHhhcCCCcc
Confidence 556666655553 122333333 55555555555542 11234455555555555555554
No 35
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.11 E-value=2.4e-11 Score=116.91 Aligned_cols=109 Identities=27% Similarity=0.373 Sum_probs=83.0
Q ss_pred CCCCccEEEcCCCc--CccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccc
Q 036258 53 NISSLKMIRLSSNS--LSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKL 130 (331)
Q Consensus 53 ~~~~L~~L~l~~~~--i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 130 (331)
..+.|+.|-+.++. +. .++..+|..+|.|++|+|++|.-.+.+|..++.+-+||+|+++++.++ .+|..+.++..|
T Consensus 543 ~~~~L~tLll~~n~~~l~-~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L 620 (889)
T KOG4658|consen 543 ENPKLRTLLLQRNSDWLL-EISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKL 620 (889)
T ss_pred CCCccceEEEeecchhhh-hcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhh
Confidence 44578888887775 54 778888888999999999987655688888889999999999998888 788888889999
Q ss_pred cccccCccccccccccCCcchhcCCCCCcEEEcCCCC
Q 036258 131 RSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNK 167 (331)
Q Consensus 131 ~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~ 167 (331)
.+|++..+..-.. + ......+++|++|.+....
T Consensus 621 ~~Lnl~~~~~l~~---~-~~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 621 IYLNLEVTGRLES---I-PGILLELQSLRVLRLPRSA 653 (889)
T ss_pred heecccccccccc---c-cchhhhcccccEEEeeccc
Confidence 9998854433221 2 3444368888988886654
No 36
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.06 E-value=1.4e-10 Score=74.31 Aligned_cols=61 Identities=33% Similarity=0.469 Sum_probs=52.5
Q ss_pred CCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKF 116 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~ 116 (331)
++|++|++++|.+. .+|...|..+++|++|++++|.+....+..|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 56888999999888 88888888899999999999988877778888999999999988864
No 37
>PLN03150 hypothetical protein; Provisional
Probab=99.05 E-value=1e-09 Score=103.27 Aligned_cols=141 Identities=31% Similarity=0.442 Sum_probs=93.9
Q ss_pred cCChhhHHHHHHHHHhccCCCC--CCC--------cc----hh-cC---CCCccEEEcCCCcCccCCChhhhcCCCCCcE
Q 036258 23 KNITTDQSALLAFKAHIADPYS--VLT--------KN----CF-YN---ISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQ 84 (331)
Q Consensus 23 ~~~~~~~~~l~~~~~~~~~~~~--~~~--------~~----~~-~~---~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~ 84 (331)
...+.+..++..+|..+.++.. ... .| |- .. ...++.|+|+++.+.+.+|..+ ..+++|+.
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i-~~L~~L~~ 446 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDI-SKLRHLQS 446 (623)
T ss_pred ccCchHHHHHHHHHHhcCCcccCCCCCCCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHH-hCCCCCCE
Confidence 4456677888888876654321 000 11 21 11 1136778888888887777766 67888888
Q ss_pred EEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcC
Q 036258 85 LVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALG 164 (331)
Q Consensus 85 L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~ 164 (331)
|+|++|.+.+.+|..++.+++|+.|++++|.+++.+|..+..+++|++|++++| .+.+.+|..+.....++..+++.
T Consensus 447 L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N---~l~g~iP~~l~~~~~~~~~l~~~ 523 (623)
T PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN---SLSGRVPAALGGRLLHRASFNFT 523 (623)
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC---cccccCChHHhhccccCceEEec
Confidence 888888888788888888888888888888888788888888888888888443 34455555544333344555555
Q ss_pred CCC
Q 036258 165 MNK 167 (331)
Q Consensus 165 ~~~ 167 (331)
+|.
T Consensus 524 ~N~ 526 (623)
T PLN03150 524 DNA 526 (623)
T ss_pred CCc
Confidence 543
No 38
>PLN03150 hypothetical protein; Provisional
Probab=99.02 E-value=3.1e-10 Score=106.78 Aligned_cols=91 Identities=35% Similarity=0.619 Sum_probs=54.3
Q ss_pred CcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEecc
Q 036258 236 LKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLF 315 (331)
Q Consensus 236 L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 315 (331)
++.|+|++|.+.+.+|..+..+. .|+.|+|++|.+.+.+|..+..+++|+.|++++|.+.+.+|+.+..+++|+.|+++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~-~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLR-HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCC-CCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 45556666666555555555554 56666666666655556556666666666666666665556556666666666666
Q ss_pred CCeeeecCCccc
Q 036258 316 GNNLQGSIPSDL 327 (331)
Q Consensus 316 ~n~~~~~~p~~~ 327 (331)
+|.++|.+|+.+
T Consensus 499 ~N~l~g~iP~~l 510 (623)
T PLN03150 499 GNSLSGRVPAAL 510 (623)
T ss_pred CCcccccCChHH
Confidence 666666666544
No 39
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.02 E-value=2.3e-10 Score=110.21 Aligned_cols=267 Identities=21% Similarity=0.225 Sum_probs=146.6
Q ss_pred hhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCccc
Q 036258 50 CFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSK 129 (331)
Q Consensus 50 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 129 (331)
.|..++.|++||+++|.-.+.+|..+ +.+-+|++|+++++.+. .+|.+++++..|.+|++..+.-...++.....+++
T Consensus 566 ff~~m~~LrVLDLs~~~~l~~LP~~I-~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~ 643 (889)
T KOG4658|consen 566 FFRSLPLLRVLDLSGNSSLSKLPSSI-GELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQS 643 (889)
T ss_pred HHhhCcceEEEECCCCCccCcCChHH-hhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhccc
Confidence 47778888888888775444778777 77888888888888876 77888888888888888877654455666666888
Q ss_pred ccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCc----eeeCcCccccccCchhccCCCCC
Q 036258 130 LRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELT----LLELGKNSFSGLVPNTFGNLRFL 205 (331)
Q Consensus 130 L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~----~L~l~~n~~~~~~~~~l~~~~~L 205 (331)
|++|.+..-. ..........+ ..+.+|+.+....... .+-..+..++.|. .+.+.++... ..+..+..+.+|
T Consensus 644 Lr~L~l~~s~-~~~~~~~l~el-~~Le~L~~ls~~~~s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L 719 (889)
T KOG4658|consen 644 LRVLRLPRSA-LSNDKLLLKEL-ENLEHLENLSITISSV-LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNL 719 (889)
T ss_pred ccEEEeeccc-cccchhhHHhh-hcccchhhheeecchh-HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCc
Confidence 8888774322 11111111112 1334444444432222 1111222223332 2222222211 233456667778
Q ss_pred CEEEccCCcccCccCCCccccccccc-cCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCC
Q 036258 206 SLLDLGNNYLTTRSSTTEWSFLSSLT-NCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNG 284 (331)
Q Consensus 206 ~~L~l~~~~l~~~~~~~~~~~~~~~~-~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~ 284 (331)
+.|.+..+.+..+.... ....... .++++..+.+.++... ..+.+. .++++|+.|.+..|.....+.+....+..
T Consensus 720 ~~L~i~~~~~~e~~~~~--~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~-~f~~~L~~l~l~~~~~~e~~i~~~k~~~~ 795 (889)
T KOG4658|consen 720 EELSILDCGISEIVIEW--EESLIVLLCFPNLSKVSILNCHML-RDLTWL-LFAPHLTSLSLVSCRLLEDIIPKLKALLE 795 (889)
T ss_pred ceEEEEcCCCchhhccc--ccccchhhhHHHHHHHHhhccccc-cccchh-hccCcccEEEEecccccccCCCHHHHhhh
Confidence 88888887765432110 0000011 1333434433333322 111221 34459999999999887766666666666
Q ss_pred CCEEEccCCCCccc-CCcCccC----------CCCCCeEeccCCeeeecCCcc
Q 036258 285 LIDLRLQDNDLNGT-IPTTVGR----------LQQLQGLFLFGNNLQGSIPSD 326 (331)
Q Consensus 285 L~~L~l~~n~l~~~-~~~~l~~----------l~~L~~L~l~~n~~~~~~p~~ 326 (331)
++++.+..+.+.+. .-...+. .+.|+.+.+..|+-.+++|..
T Consensus 796 l~~~i~~f~~~~~l~~~~~l~~l~~i~~~~l~~~~l~~~~ve~~p~l~~~P~~ 848 (889)
T KOG4658|consen 796 LKELILPFNKLEGLRMLCSLGGLPQLYWLPLSFLKLEELIVEECPKLGKLPLL 848 (889)
T ss_pred cccEEecccccccceeeecCCCCceeEecccCccchhheehhcCcccccCccc
Confidence 76665655555432 1111111 234677777777766677753
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=8.4e-10 Score=70.63 Aligned_cols=60 Identities=30% Similarity=0.377 Sum_probs=50.3
Q ss_pred cccEEEeccCcccccCCccccCCCCCCEEEccCCCCcccCCcCccCCCCCCeEeccCCee
Q 036258 260 SLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNL 319 (331)
Q Consensus 260 ~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~ 319 (331)
+|++|++++|++....+.++.++++|++|++++|.+++..+++|.++++|++|++++|++
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 678888888888866667888889999999999998876677888899999999988875
No 41
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.91 E-value=1e-10 Score=95.50 Aligned_cols=203 Identities=19% Similarity=0.134 Sum_probs=120.2
Q ss_pred CCCCCCEEEccCcccc--ccCCccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCC--CCcccccC
Q 036258 102 KCTQLQHLWLEHNKFT--GRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLR--TIPNSITN 177 (331)
Q Consensus 102 ~l~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~--~~~~~~~~ 177 (331)
....++.+||.+|.++ ..+...+.++|.|+.|+++.|+.+.-.+..|. ...+|++|-+.++.+. .....+..
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~----p~~nl~~lVLNgT~L~w~~~~s~l~~ 144 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPL----PLKNLRVLVLNGTGLSWTQSTSSLDD 144 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcc----cccceEEEEEcCCCCChhhhhhhhhc
Confidence 3455666666666554 12223345666666666666555554444442 4567777777777665 34456667
Q ss_pred CCCCceeeCcCccccc--cCchhccCC-CCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchh
Q 036258 178 ASELTLLELGKNSFSG--LVPNTFGNL-RFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLI 254 (331)
Q Consensus 178 l~~L~~L~l~~n~~~~--~~~~~l~~~-~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~ 254 (331)
++.+++|+++.|..-. ...+....+ +.+.+++...|....|.. ......-+|++..+.+..+++.+.....-
T Consensus 145 lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~-----~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~ 219 (418)
T KOG2982|consen 145 LPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLN-----KNKLSRIFPNVNSVFVCEGPLKTESSEKG 219 (418)
T ss_pred chhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHH-----HHhHHhhcccchheeeecCcccchhhccc
Confidence 7777788777773321 111112222 356667777775544321 22234556788888888887765544432
Q ss_pred hhccccccEEEeccCccccc-CCccccCCCCCCEEEccCCCCcccCCc------CccCCCCCCeEe
Q 036258 255 GNFSDSLQQFYAYDCELKGS-IPQEIGNLNGLIDLRLQDNDLNGTIPT------TVGRLQQLQGLF 313 (331)
Q Consensus 255 ~~~~~~L~~L~l~~~~~~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~------~l~~l~~L~~L~ 313 (331)
+.-.+.+..|+|+.+++.+. -.+.+.++++|..|.++++++.+.+.. .++.+++++.|+
T Consensus 220 se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLN 285 (418)
T KOG2982|consen 220 SEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLN 285 (418)
T ss_pred CCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEec
Confidence 22223677788888887643 245788899999999999998754432 245566666654
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.87 E-value=2.1e-10 Score=103.20 Aligned_cols=128 Identities=34% Similarity=0.398 Sum_probs=59.4
Q ss_pred CCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCccccccc
Q 036258 54 ISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSL 133 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 133 (331)
+..++.+.+..+.+. .+-..+ ..+.+|..|++.+|.|..+. ..+..+++|++|++++|.++.. ..+..++.|+.|
T Consensus 71 l~~l~~l~l~~n~i~-~~~~~l-~~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIA-KILNHL-SKLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred hHhHHhhccchhhhh-hhhccc-ccccceeeeeccccchhhcc-cchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 344444445555444 211112 34555555555555554221 1144555555555555555422 223344445555
Q ss_pred ccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCccc-ccCCCCCceeeCcCcccc
Q 036258 134 VLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNS-ITNASELTLLELGKNSFS 192 (331)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~-~~~l~~L~~L~l~~n~~~ 192 (331)
++.+|.+..+.+. ..+++|+.+++++|.+..+... ...+.+++.+.+++|.+.
T Consensus 146 ~l~~N~i~~~~~~------~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 146 NLSGNLISDISGL------ESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred eeccCcchhccCC------ccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh
Confidence 5555444433221 0245555555555555543322 344555555555555544
No 43
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.80 E-value=4.2e-10 Score=101.21 Aligned_cols=219 Identities=28% Similarity=0.281 Sum_probs=140.6
Q ss_pred CCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLV 134 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 134 (331)
+.++.++...+.+. ..... ...+..++.+.++.|.+.. .-..+..+.+|..+++..|.+.. +...+..+++|++|+
T Consensus 49 ~~~~~~~~~~~~~~-~~~~~-~~~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ 124 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDG-SDEDL-VESLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLD 124 (414)
T ss_pred chhhhhcchhcccc-chhhh-HHHhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchhee
Confidence 34455555554433 11111 1357788888898888764 33457888999999999999873 333367789999999
Q ss_pred cCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCc-hhccCCCCCCEEEccCC
Q 036258 135 LGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVP-NTFGNLRFLSLLDLGNN 213 (331)
Q Consensus 135 l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~l~~~~~L~~L~l~~~ 213 (331)
+++|.+..+.+- ..++.|+.|++.+|.++.+. .+..++.|+.+++++|.+....+ . ...+..++.+.+.+|
T Consensus 125 ls~N~I~~i~~l------~~l~~L~~L~l~~N~i~~~~-~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n 196 (414)
T KOG0531|consen 125 LSFNKITKLEGL------STLTLLKELNLSGNLISDIS-GLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGN 196 (414)
T ss_pred ccccccccccch------hhccchhhheeccCcchhcc-CCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCC
Confidence 988888766432 15677999999999998664 45558999999999999986544 2 467788999999999
Q ss_pred cccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCCCEEEccCC
Q 036258 214 YLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDN 293 (331)
Q Consensus 214 ~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n 293 (331)
.+..+.. +.....+..+++.+|.+...-+-...... .++.+++.+|++. ..+..+..+..+..|++.+|
T Consensus 197 ~i~~i~~---------~~~~~~l~~~~l~~n~i~~~~~l~~~~~~-~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n 265 (414)
T KOG0531|consen 197 SIREIEG---------LDLLKKLVLLSLLDNKISKLEGLNELVML-HLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSN 265 (414)
T ss_pred chhcccc---------hHHHHHHHHhhcccccceeccCcccchhH-HHHHHhcccCccc-cccccccccccccccchhhc
Confidence 8876532 23333344445555555422221110000 1566666666665 23344555555566666555
Q ss_pred CCc
Q 036258 294 DLN 296 (331)
Q Consensus 294 ~l~ 296 (331)
.+.
T Consensus 266 ~~~ 268 (414)
T KOG0531|consen 266 RIS 268 (414)
T ss_pred ccc
Confidence 543
No 44
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.56 E-value=2.2e-10 Score=103.93 Aligned_cols=134 Identities=22% Similarity=0.261 Sum_probs=60.0
Q ss_pred cCCCCCcEEEccCCccccc-CCccCcCCCCCCEEEccCccccccCCccccCc-ccccccccCcccc-------ccccccC
Q 036258 77 NRLPSLEQLVLRSNGFFGQ-IPLSLSKCTQLQHLWLEHNKFTGRLPENIGNL-SKLRSLVLGHKAH-------NSLHGHL 147 (331)
Q Consensus 77 ~~~~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~l~~~~~-------~~~~~~~ 147 (331)
.-+++++.|.+-.-.-.+. .|-.+..+..|++|.++++.+.. ..++..+ ..|++|.-.+ .. ....+++
T Consensus 81 d~lqkt~~lkl~~~pa~~pt~pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~ 157 (1096)
T KOG1859|consen 81 DFLQKTKVLKLLPSPARDPTEPISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLICHN-SLDALRHVFASCGGDI 157 (1096)
T ss_pred HHHhhheeeeecccCCCCCCCCceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhhhc-cHHHHHHHHHHhcccc
Confidence 3345555555543321111 14556667788888888877762 2222222 1344443211 11 0011111
Q ss_pred CcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccCCCCCCEEEccCCcccC
Q 036258 148 PSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTT 217 (331)
Q Consensus 148 ~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~ 217 (331)
.... .--+|...+.++|.+..+...+.-++.+++|+++.|++... +.+..++.|++|||+.|.+..
T Consensus 158 ~ns~--~Wn~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~ 223 (1096)
T KOG1859|consen 158 SNSP--VWNKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRH 223 (1096)
T ss_pred ccch--hhhhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhcc
Confidence 1100 00124444455555554444455455555555555555433 244455555555555555544
No 45
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.50 E-value=7.4e-10 Score=90.55 Aligned_cols=178 Identities=22% Similarity=0.146 Sum_probs=92.9
Q ss_pred cccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCC-CCcccccCCCCCceeeCcCccc-cc-cCchhccCCCCC
Q 036258 129 KLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLR-TIPNSITNASELTLLELGKNSF-SG-LVPNTFGNLRFL 205 (331)
Q Consensus 129 ~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~~~~~~~~l~~L~~L~l~~n~~-~~-~~~~~l~~~~~L 205 (331)
.++++|+++ ..+.......+...+.+|+.|.+.++.+. .+...+..-.+|+.++++.+.- +. ...-.+.++..|
T Consensus 186 Rlq~lDLS~---s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L 262 (419)
T KOG2120|consen 186 RLQHLDLSN---SVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRL 262 (419)
T ss_pred hhHHhhcch---hheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhH
Confidence 466677643 22222222233345666777777766665 3334555556677777766532 11 112345566677
Q ss_pred CEEEccCCcccCccCCCccccccccc-cCCCCcEEEeeccccc--ccCCchhhhccccccEEEeccCcc-cccCCccccC
Q 036258 206 SLLDLGNNYLTTRSSTTEWSFLSSLT-NCIYLKVLGLHSNQLS--GILPPLIGNFSDSLQQFYAYDCEL-KGSIPQEIGN 281 (331)
Q Consensus 206 ~~L~l~~~~l~~~~~~~~~~~~~~~~-~~~~L~~L~l~~n~~~--~~~~~~~~~~~~~L~~L~l~~~~~-~~~~~~~l~~ 281 (331)
..|++++|.+..-. +...+. --++|+.|+++++.-. +.--..+..-++.+.+|||++|.. +......+..
T Consensus 263 ~~LNlsWc~l~~~~------Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~k 336 (419)
T KOG2120|consen 263 DELNLSWCFLFTEK------VTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFK 336 (419)
T ss_pred hhcCchHhhccchh------hhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHh
Confidence 77777777655411 011111 1245667777665421 111122333344777777777643 3233345566
Q ss_pred CCCCCEEEccCCCCcccCCc---CccCCCCCCeEeccCC
Q 036258 282 LNGLIDLRLQDNDLNGTIPT---TVGRLQQLQGLFLFGN 317 (331)
Q Consensus 282 l~~L~~L~l~~n~l~~~~~~---~l~~l~~L~~L~l~~n 317 (331)
++.|++|.++.|..- +|+ .+...|+|.+|++.|+
T Consensus 337 f~~L~~lSlsRCY~i--~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 337 FNYLQHLSLSRCYDI--IPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred cchheeeehhhhcCC--ChHHeeeeccCcceEEEEeccc
Confidence 677777777666532 222 3455677777777665
No 46
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.47 E-value=3.6e-08 Score=80.84 Aligned_cols=84 Identities=23% Similarity=0.320 Sum_probs=45.9
Q ss_pred CCCccEEEcCCCcCccC-CChhhhcCCCCCcEEEccCCcccccCCccC-cCCCCCCEEEccCccccc-cCCccccCcccc
Q 036258 54 ISSLKMIRLSSNSLSGS-LPNDLCNRLPSLEQLVLRSNGFFGQIPLSL-SKCTQLQHLWLEHNKFTG-RLPENIGNLSKL 130 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~~~-~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~-~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L 130 (331)
.+.++++||.+|.|++. -...+.+.+|+|++|+++.|.+...+. +. ....+|+.|.|.+..+.. .....+..+|.+
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~-~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIK-SLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccc-cCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 45666677777766531 112334567777777777766542221 12 244566677776665441 233344556666
Q ss_pred cccccCcc
Q 036258 131 RSLVLGHK 138 (331)
Q Consensus 131 ~~L~l~~~ 138 (331)
+.|.++.|
T Consensus 149 telHmS~N 156 (418)
T KOG2982|consen 149 TELHMSDN 156 (418)
T ss_pred hhhhhccc
Confidence 66666555
No 47
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.46 E-value=2.4e-09 Score=97.46 Aligned_cols=179 Identities=31% Similarity=0.395 Sum_probs=94.3
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCc------cc---ccCCccCcCCCCCCEEEccCccccccCC
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNG------FF---GQIPLSLSKCTQLQHLWLEHNKFTGRLP 121 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~------i~---~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 121 (331)
+..++.|++|.+.+|.+. . -.++.+--..|+.|..++.- +. +.+..+ .-+..|...++++|.+. ...
T Consensus 105 ifpF~sLr~LElrg~~L~-~-~~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns-~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 105 IFPFRSLRVLELRGCDLS-T-AKGLQELRHQLEKLICHNSLDALRHVFASCGGDISNS-PVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred eccccceeeEEecCcchh-h-hhhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccc-hhhhhHhhhhcchhhHH-hHH
Confidence 455677778888777765 2 12221112344444443320 00 111111 11345666666677665 445
Q ss_pred ccccCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccccCchhccC
Q 036258 122 ENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSGLVPNTFGN 201 (331)
Q Consensus 122 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~ 201 (331)
.++.-++.++.|+|++|..... +.+. .+++|++|++++|.++.+|..-..-.+|+.|.+++|.+... ..+.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v-----~~Lr-~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN~l~tL--~gie~ 252 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV-----DNLR-RLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNNALTTL--RGIEN 252 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh-----HHHH-hcccccccccccchhccccccchhhhhheeeeecccHHHhh--hhHHh
Confidence 5566666777777765555433 1222 66777777777777766653222223467777777666532 23455
Q ss_pred CCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeeccccc
Q 036258 202 LRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLS 247 (331)
Q Consensus 202 ~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 247 (331)
+.+|+.||++.|-+..- .-..-+..+..|+.|.|.+|++.
T Consensus 253 LksL~~LDlsyNll~~h------seL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEH------SELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcc------hhhhHHHHHHHHHHHhhcCCccc
Confidence 66667777777655542 11222344555666666666653
No 48
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=2e-09 Score=88.06 Aligned_cols=225 Identities=21% Similarity=0.189 Sum_probs=133.1
Q ss_pred CCccEEEcCCCcCccCCChhhhcCC--CCCcEEEccCCccccc-CCccCc-CCCCCCEEEccCccccc-cCCccccCccc
Q 036258 55 SSLKMIRLSSNSLSGSLPNDLCNRL--PSLEQLVLRSNGFFGQ-IPLSLS-KCTQLQHLWLEHNKFTG-RLPENIGNLSK 129 (331)
Q Consensus 55 ~~L~~L~l~~~~i~~~~~~~~~~~~--~~L~~L~L~~n~i~~~-~~~~~~-~l~~L~~L~l~~n~~~~-~~~~~~~~l~~ 129 (331)
...+.+|+.+-.|. |... +.+ .....+.+...-+... +.+.+. .-.+||++||++..++. .+-..+.++.+
T Consensus 136 ~lW~~lDl~~r~i~---p~~l-~~l~~rgV~v~Rlar~~~~~prlae~~~~frsRlq~lDLS~s~it~stl~~iLs~C~k 211 (419)
T KOG2120|consen 136 SLWQTLDLTGRNIH---PDVL-GRLLSRGVIVFRLARSFMDQPRLAEHFSPFRSRLQHLDLSNSVITVSTLHGILSQCSK 211 (419)
T ss_pred cceeeeccCCCccC---hhHH-HHHHhCCeEEEEcchhhhcCchhhhhhhhhhhhhHHhhcchhheeHHHHHHHHHHHHh
Confidence 34677888776554 2211 222 2333334333222111 112222 12468888888877662 23344567788
Q ss_pred ccccccCccccccccccCCcchhcCCCCCcEEEcCCCC-CCCC--cccccCCCCCceeeCcCccccccC-chhccC-CCC
Q 036258 130 LRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNK-LRTI--PNSITNASELTLLELGKNSFSGLV-PNTFGN-LRF 204 (331)
Q Consensus 130 L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~-l~~~--~~~~~~l~~L~~L~l~~n~~~~~~-~~~l~~-~~~ 204 (331)
|+.|.+.+++... .+...+. .-.+|+.++++.+. +++. .-.+.+++.|.+|++++|...... .....+ -+.
T Consensus 212 Lk~lSlEg~~LdD---~I~~~iA-kN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~~~~Vtv~V~hise~ 287 (419)
T KOG2120|consen 212 LKNLSLEGLRLDD---PIVNTIA-KNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLFTEKVTVAVAHISET 287 (419)
T ss_pred hhhccccccccCc---HHHHHHh-ccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhccchhhhHHHhhhchh
Confidence 8888886555432 3333333 56788888886664 5532 245778889999999988764321 111111 256
Q ss_pred CCEEEccCCcccCccCCCccccccccccCCCCcEEEeeccc-ccccCCchhhhccccccEEEeccCcccccCCc---ccc
Q 036258 205 LSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQ-LSGILPPLIGNFSDSLQQFYAYDCELKGSIPQ---EIG 280 (331)
Q Consensus 205 L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~-~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~---~l~ 280 (331)
|..|+++++.-.-... .+......+|+|.+|||+++. ++......+.+++ .|++|.++.|-.. .|+ .+.
T Consensus 288 l~~LNlsG~rrnl~~s----h~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~-~L~~lSlsRCY~i--~p~~~~~l~ 360 (419)
T KOG2120|consen 288 LTQLNLSGYRRNLQKS----HLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFN-YLQHLSLSRCYDI--IPETLLELN 360 (419)
T ss_pred hhhhhhhhhHhhhhhh----HHHHHHHhCCceeeeccccccccCchHHHHHHhcc-hheeeehhhhcCC--ChHHeeeec
Confidence 8889998874221000 233445788999999999876 3433444566666 8999999988643 444 456
Q ss_pred CCCCCCEEEccCCC
Q 036258 281 NLNGLIDLRLQDND 294 (331)
Q Consensus 281 ~l~~L~~L~l~~n~ 294 (331)
..|+|+.|++-++-
T Consensus 361 s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 361 SKPSLVYLDVFGCV 374 (419)
T ss_pred cCcceEEEEecccc
Confidence 67889999986654
No 49
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.41 E-value=1e-08 Score=74.45 Aligned_cols=106 Identities=20% Similarity=0.170 Sum_probs=66.6
Q ss_pred CCceeeCcCcccccc--CchhccCCCCCCEEEccCCcccCccCCCcccccccccc-CCCCcEEEeecccccccCCchhhh
Q 036258 180 ELTLLELGKNSFSGL--VPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTN-CIYLKVLGLHSNQLSGILPPLIGN 256 (331)
Q Consensus 180 ~L~~L~l~~n~~~~~--~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~-~~~L~~L~l~~n~~~~~~~~~~~~ 256 (331)
.+..+++++|++... ....+.....|...++++|.+... |..|.. .+.++.+++++|.+. .+|..+..
T Consensus 28 E~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~f--------p~kft~kf~t~t~lNl~~neis-dvPeE~Aa 98 (177)
T KOG4579|consen 28 ELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKF--------PKKFTIKFPTATTLNLANNEIS-DVPEELAA 98 (177)
T ss_pred HhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhC--------CHHHhhccchhhhhhcchhhhh-hchHHHhh
Confidence 455666777765421 123344455667777777777643 333333 346777777777776 66666666
Q ss_pred ccccccEEEeccCcccccCCccccCCCCCCEEEccCCCCc
Q 036258 257 FSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDNDLN 296 (331)
Q Consensus 257 ~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n~l~ 296 (331)
++ .|+.|+++.|.+. ..|.++..+.++-.|+..+|.+.
T Consensus 99 m~-aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 99 MP-ALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hH-HhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 66 7777777777776 56666666777777777777766
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.38 E-value=4.1e-08 Score=79.52 Aligned_cols=241 Identities=17% Similarity=0.154 Sum_probs=139.5
Q ss_pred cCCCCCcEEEccCCcccccCC----ccCcCCCCCCEEEccCcccc---ccCC-------ccccCcccccccccCcccccc
Q 036258 77 NRLPSLEQLVLRSNGFFGQIP----LSLSKCTQLQHLWLEHNKFT---GRLP-------ENIGNLSKLRSLVLGHKAHNS 142 (331)
Q Consensus 77 ~~~~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~l~~n~~~---~~~~-------~~~~~l~~L~~L~l~~~~~~~ 142 (331)
..+..+..++|++|.|..... ..+.+-.+|+..+++.-... ..++ .++..+++|+..+++.|.+..
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 357889999999998854333 33455577888887753221 1222 345677888888887666554
Q ss_pred ccccCCcchhcCCCCCcEEEcCCCCCCCCc-----c---------cccCCCCCceeeCcCccccccCc----hhccCCCC
Q 036258 143 LHGHLPSTLSVSLPNLKWLALGMNKLRTIP-----N---------SITNASELTLLELGKNSFSGLVP----NTFGNLRF 204 (331)
Q Consensus 143 ~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~-----~---------~~~~l~~L~~L~l~~n~~~~~~~----~~l~~~~~ 204 (331)
-..............|++|.+++|++..+. . ...+-+.|+.+..+.|++..... ..+..-.+
T Consensus 107 ~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~ 186 (388)
T COG5238 107 EFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHEN 186 (388)
T ss_pred ccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcC
Confidence 322222222335677888888888776332 1 12234677778777777653221 12222356
Q ss_pred CCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchh----hhccccccEEEeccCcccccCCccc-
Q 036258 205 LSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLI----GNFSDSLQQFYAYDCELKGSIPQEI- 279 (331)
Q Consensus 205 L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~----~~~~~~L~~L~l~~~~~~~~~~~~l- 279 (331)
|+.+.+..|.|..-+... -....+..+++|+.|++.+|.++..-...+ ..|+ .|+.|.+.+|-+......++
T Consensus 187 lk~vki~qNgIrpegv~~--L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~-~lrEL~lnDClls~~G~~~v~ 263 (388)
T COG5238 187 LKEVKIQQNGIRPEGVTM--LAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWN-LLRELRLNDCLLSNEGVKSVL 263 (388)
T ss_pred ceeEEeeecCcCcchhHH--HHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccc-hhhhccccchhhccccHHHHH
Confidence 788888888776421110 122335567778888888887764433322 2333 57778887777765443322
Q ss_pred -----cCCCCCCEEEccCCCCcccCCc-----Cc--cCCCCCCeEeccCCeee
Q 036258 280 -----GNLNGLIDLRLQDNDLNGTIPT-----TV--GRLQQLQGLFLFGNNLQ 320 (331)
Q Consensus 280 -----~~l~~L~~L~l~~n~l~~~~~~-----~l--~~l~~L~~L~l~~n~~~ 320 (331)
...|+|..|-..+|...+..-. .+ ..+|-|..|.++||.+.
T Consensus 264 ~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 264 RRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred HHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 2246677777777765542111 11 24566667777777765
No 51
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.29 E-value=1.2e-07 Score=76.86 Aligned_cols=167 Identities=23% Similarity=0.284 Sum_probs=90.4
Q ss_pred CCCCCcEEEccCCcccccCCc----cCcCCCCCCEEEccCcccccc----CCc---------cccCcccccccccCcccc
Q 036258 78 RLPSLEQLVLRSNGFFGQIPL----SLSKCTQLQHLWLEHNKFTGR----LPE---------NIGNLSKLRSLVLGHKAH 140 (331)
Q Consensus 78 ~~~~L~~L~L~~n~i~~~~~~----~~~~l~~L~~L~l~~n~~~~~----~~~---------~~~~l~~L~~L~l~~~~~ 140 (331)
+||+|+..+|++|.+....|. .++.-..|.+|.+++|.+..+ +.. ..++-|.|+.+....|+.
T Consensus 90 kcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRl 169 (388)
T COG5238 90 KCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRL 169 (388)
T ss_pred cCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchh
Confidence 567777777777765433332 234556677777777665411 111 112345666666666665
Q ss_pred ccccccCCcchhcCCCCCcEEEcCCCCCCC--C----cccccCCCCCceeeCcCccccc----cCchhccCCCCCCEEEc
Q 036258 141 NSLHGHLPSTLSVSLPNLKWLALGMNKLRT--I----PNSITNASELTLLELGKNSFSG----LVPNTFGNLRFLSLLDL 210 (331)
Q Consensus 141 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~--~----~~~~~~l~~L~~L~l~~n~~~~----~~~~~l~~~~~L~~L~l 210 (331)
-+.+.......+....+|+++.+.+|++.. + -..+..+++|+.|++.+|.++. .+...+..|+.|+.|.+
T Consensus 170 engs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~l 249 (388)
T COG5238 170 ENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRL 249 (388)
T ss_pred ccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhccc
Confidence 555544444444444567777777776651 1 1233445677777777776642 22345556666777777
Q ss_pred cCCcccCccCCCccccccccc--cCCCCcEEEeeccccc
Q 036258 211 GNNYLTTRSSTTEWSFLSSLT--NCIYLKVLGLHSNQLS 247 (331)
Q Consensus 211 ~~~~l~~~~~~~~~~~~~~~~--~~~~L~~L~l~~n~~~ 247 (331)
..|.+..-+.. ++...+. ..|+|+.|...+|-+.
T Consensus 250 nDClls~~G~~---~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 250 NDCLLSNEGVK---SVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred cchhhccccHH---HHHHHhhhhcCCCccccccchhhhc
Confidence 77766543221 2222222 2355666666665543
No 52
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.27 E-value=6.9e-06 Score=72.02 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=18.6
Q ss_pred ccccccEEEeccCcccccCCccccCCCCCCEEEccCC
Q 036258 257 FSDSLQQFYAYDCELKGSIPQEIGNLNGLIDLRLQDN 293 (331)
Q Consensus 257 ~~~~L~~L~l~~~~~~~~~~~~l~~l~~L~~L~l~~n 293 (331)
+|++|+.|++.+|... ..|..+- .+|+.|.++.+
T Consensus 154 LPsSLk~L~Is~c~~i-~LP~~LP--~SLk~L~ls~n 187 (426)
T PRK15386 154 ISPSLKTLSLTGCSNI-ILPEKLP--ESLQSITLHIE 187 (426)
T ss_pred cCCcccEEEecCCCcc-cCccccc--ccCcEEEeccc
Confidence 3446777777766654 2333222 35666666554
No 53
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.27 E-value=2.4e-06 Score=66.42 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=86.9
Q ss_pred CceeeCcCccccccCchhccC-CCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccc
Q 036258 181 LTLLELGKNSFSGLVPNTFGN-LRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSD 259 (331)
Q Consensus 181 L~~L~l~~n~~~~~~~~~l~~-~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~ 259 (331)
=+++++.+.++..+ +.++. ......++++.|.+... ..+..++.|.+|.+.+|.|+ .+...+..+.+
T Consensus 21 e~e~~LR~lkip~i--enlg~~~d~~d~iDLtdNdl~~l---------~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p 88 (233)
T KOG1644|consen 21 ERELDLRGLKIPVI--ENLGATLDQFDAIDLTDNDLRKL---------DNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLP 88 (233)
T ss_pred ccccccccccccch--hhccccccccceecccccchhhc---------ccCCCccccceEEecCCcce-eeccchhhhcc
Confidence 45666666665422 12332 23567788888877642 34777888999999999998 44555555555
Q ss_pred cccEEEeccCcccccC-CccccCCCCCCEEEccCCCCcccC---CcCccCCCCCCeEeccCC
Q 036258 260 SLQQFYAYDCELKGSI-PQEIGNLNGLIDLRLQDNDLNGTI---PTTVGRLQQLQGLFLFGN 317 (331)
Q Consensus 260 ~L~~L~l~~~~~~~~~-~~~l~~l~~L~~L~l~~n~l~~~~---~~~l~~l~~L~~L~l~~n 317 (331)
.+..|.|.+|++.... .+-+..||+|+.|.+-+|+++..- .-.+..+|+|+.||+++-
T Consensus 89 ~l~~L~LtnNsi~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 89 NLKTLILTNNSIQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred ccceEEecCcchhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 8999999999887321 335678899999999999987421 123567899999998763
No 54
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.27 E-value=4.9e-07 Score=53.03 Aligned_cols=36 Identities=28% Similarity=0.491 Sum_probs=16.1
Q ss_pred CCCEEEccCCCCcccCCcCccCCCCCCeEeccCCeee
Q 036258 284 GLIDLRLQDNDLNGTIPTTVGRLQQLQGLFLFGNNLQ 320 (331)
Q Consensus 284 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 320 (331)
+|++|++++|.|+ .+|..++++++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 3444444444444 33333444455555555555444
No 55
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.09 E-value=1.9e-07 Score=67.89 Aligned_cols=108 Identities=27% Similarity=0.389 Sum_probs=47.6
Q ss_pred ccEEEcCCCcCccCCChhhh--cCCCCCcEEEccCCcccccCCccCc-CCCCCCEEEccCccccccCCccccCccccccc
Q 036258 57 LKMIRLSSNSLSGSLPNDLC--NRLPSLEQLVLRSNGFFGQIPLSLS-KCTQLQHLWLEHNKFTGRLPENIGNLSKLRSL 133 (331)
Q Consensus 57 L~~L~l~~~~i~~~~~~~~~--~~~~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 133 (331)
+..++|+.|++. .+++.+. ....+|...+|++|.+. ..|+.|. ..+.++.|++++|.++ .+|..++.++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 334555555543 4443321 12334444455555554 2333332 3345555555555555 445445555555555
Q ss_pred ccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCc
Q 036258 134 VLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIP 172 (331)
Q Consensus 134 ~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~ 172 (331)
+++.|..+.. +..++ .+.++-.|+...|.+.+++
T Consensus 106 Nl~~N~l~~~----p~vi~-~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 106 NLRFNPLNAE----PRVIA-PLIKLDMLDSPENARAEID 139 (177)
T ss_pred ccccCccccc----hHHHH-HHHhHHHhcCCCCccccCc
Confidence 5543333321 12222 2444444444555444444
No 56
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.05 E-value=9.2e-06 Score=63.28 Aligned_cols=106 Identities=24% Similarity=0.296 Sum_probs=57.7
Q ss_pred CCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccccCccccccccccCCcchhcCCCCC
Q 036258 79 LPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNL 158 (331)
Q Consensus 79 ~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L 158 (331)
..+...++|++|.+.. + ..|..+++|.+|.+.+|+++.+.|.--.-+++|..|.+.+|++..+.+--+- ..+|+|
T Consensus 41 ~d~~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pL---a~~p~L 115 (233)
T KOG1644|consen 41 LDQFDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELGDLDPL---ASCPKL 115 (233)
T ss_pred ccccceecccccchhh-c-ccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhhhcchh---ccCCcc
Confidence 4456666777776642 2 3456667777777777777644443333345566666655555554322111 145666
Q ss_pred cEEEcCCCCCCCCc----ccccCCCCCceeeCcCc
Q 036258 159 KWLALGMNKLRTIP----NSITNASELTLLELGKN 189 (331)
Q Consensus 159 ~~L~l~~~~l~~~~----~~~~~l~~L~~L~l~~n 189 (331)
++|.+-+|.+..-. ..+..+++|+.|++..-
T Consensus 116 ~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kV 150 (233)
T KOG1644|consen 116 EYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKV 150 (233)
T ss_pred ceeeecCCchhcccCceeEEEEecCcceEeehhhh
Confidence 66666666554222 33455566666665543
No 57
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=98.04 E-value=9.9e-07 Score=83.40 Aligned_cols=211 Identities=23% Similarity=0.244 Sum_probs=129.5
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCcc-------------C--cCCCCCCEEEccCcc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLS-------------L--SKCTQLQHLWLEHNK 115 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~-------------~--~~l~~L~~L~l~~n~ 115 (331)
+..--+++.+++.+.... .....+..... |+.+.+.+-......-.. + ..-.+|++|++++..
T Consensus 56 ~~~~f~ltki~l~~~~~~-~~~~~~l~~~~-L~sl~LGnl~~~k~~~~~~~~idi~~lL~~~Ln~~sr~nL~~LdI~G~~ 133 (699)
T KOG3665|consen 56 IIRKFNLTKIDLKNVTLQ-HQTLEMLRKQD-LESLKLGNLDKIKQDYLDDATIDIISLLKDLLNEESRQNLQHLDISGSE 133 (699)
T ss_pred hhhhheeEEeeccceecc-hhHHHHHhhcc-ccccCCcchHhhhhhhhhhhhccHHHHHHHHHhHHHHHhhhhcCccccc
Confidence 444456777777776554 22223323333 777777764322110000 0 112589999998864
Q ss_pred cc-ccCCccc-cCcccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCCCCcccccCCCCCceeeCcCccccc
Q 036258 116 FT-GRLPENI-GNLSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLRTIPNSITNASELTLLELGKNSFSG 193 (331)
Q Consensus 116 ~~-~~~~~~~-~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~~ 193 (331)
.- ..-+..+ .-+|.|+.|.+.+..... .-...++..+|+|..||+++++++.+ .+++.+++|+.|.+.+-.+..
T Consensus 134 ~~s~~W~~kig~~LPsL~sL~i~~~~~~~---~dF~~lc~sFpNL~sLDIS~TnI~nl-~GIS~LknLq~L~mrnLe~e~ 209 (699)
T KOG3665|consen 134 LFSNGWPKKIGTMLPSLRSLVISGRQFDN---DDFSQLCASFPNLRSLDISGTNISNL-SGISRLKNLQVLSMRNLEFES 209 (699)
T ss_pred hhhccHHHHHhhhCcccceEEecCceecc---hhHHHHhhccCccceeecCCCCccCc-HHHhccccHHHHhccCCCCCc
Confidence 32 1111222 357899999886533322 22345666899999999999999877 688999999999988876653
Q ss_pred c-CchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEecc
Q 036258 194 L-VPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYD 268 (331)
Q Consensus 194 ~-~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~ 268 (331)
. .-..+..+.+|++||++......... .-..+.+.-..+|+|+.||.++..+.+.+-+.+-...++|+.+..-+
T Consensus 210 ~~~l~~LF~L~~L~vLDIS~~~~~~~~~-ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~~~ 284 (699)
T KOG3665|consen 210 YQDLIDLFNLKKLRVLDISRDKNNDDTK-IIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAALD 284 (699)
T ss_pred hhhHHHHhcccCCCeeeccccccccchH-HHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhhhh
Confidence 1 11346678999999999875544220 00023334456889999999988887666655544444666555443
No 58
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.96 E-value=1.9e-05 Score=58.74 Aligned_cols=86 Identities=17% Similarity=0.339 Sum_probs=47.5
Q ss_pred CCcchhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCcccc
Q 036258 46 LTKNCFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIG 125 (331)
Q Consensus 46 ~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 125 (331)
++.++|.++++|+.+.+.. .+. .++...|..+++|+.+.+..+ +.......|..+++|+.+.+.. .+.......|.
T Consensus 3 i~~~~F~~~~~l~~i~~~~-~~~-~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~ 78 (129)
T PF13306_consen 3 IGNNAFYNCSNLESITFPN-TIK-KIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFS 78 (129)
T ss_dssp E-TTTTTT-TT--EEEETS-T---EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTT
T ss_pred ECHHHHhCCCCCCEEEECC-Cee-EeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccc
Confidence 4556788888888888864 455 677777788878888888764 5545556677777788888865 33323334555
Q ss_pred Cccccccccc
Q 036258 126 NLSKLRSLVL 135 (331)
Q Consensus 126 ~l~~L~~L~l 135 (331)
.+++|+.+++
T Consensus 79 ~~~~l~~i~~ 88 (129)
T PF13306_consen 79 NCTNLKNIDI 88 (129)
T ss_dssp T-TTECEEEE
T ss_pred cccccccccc
Confidence 5666666665
No 59
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.89 E-value=1.4e-05 Score=46.80 Aligned_cols=36 Identities=33% Similarity=0.524 Sum_probs=18.3
Q ss_pred CCcEEEcCCCCCCCCcccccCCCCCceeeCcCcccc
Q 036258 157 NLKWLALGMNKLRTIPNSITNASELTLLELGKNSFS 192 (331)
Q Consensus 157 ~L~~L~l~~~~l~~~~~~~~~l~~L~~L~l~~n~~~ 192 (331)
+|++|++++|+++.+|..+.++++|+.|++++|.+.
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCC
Confidence 455555555555555544555555555555555544
No 60
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.85 E-value=4e-05 Score=56.97 Aligned_cols=126 Identities=20% Similarity=0.253 Sum_probs=55.1
Q ss_pred CCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCcccccccccCccccccccccCCc
Q 036258 70 SLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSLVLGHKAHNSLHGHLPS 149 (331)
Q Consensus 70 ~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~ 149 (331)
.+++..|..+.+|+.+.+.. .+..+....|..+.+|+.+.+..+ +.......|..+++++.+.+.. ... .+..
T Consensus 2 ~i~~~~F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~----~i~~ 74 (129)
T PF13306_consen 2 SIGNNAFYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK----SIGD 74 (129)
T ss_dssp EE-TTTTTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-----EE-T
T ss_pred EECHHHHhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc----cccc
Confidence 45667778888888888875 455566667888888888888775 5434445666666677776632 111 2333
Q ss_pred chhcCCCCCcEEEcCCCCCCCCc-ccccCCCCCceeeCcCccccccCchhccCCCCC
Q 036258 150 TLSVSLPNLKWLALGMNKLRTIP-NSITNASELTLLELGKNSFSGLVPNTFGNLRFL 205 (331)
Q Consensus 150 ~~~~~l~~L~~L~l~~~~l~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L 205 (331)
..|..+++++.+.+..+ +..++ ..+... .++.+.+.. .+.......|.++++|
T Consensus 75 ~~F~~~~~l~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 75 NAFSNCTNLKNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp TTTTT-TTECEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred ccccccccccccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 44444566666666443 33332 334443 555555543 2222333444444433
No 61
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.83 E-value=7.7e-06 Score=77.47 Aligned_cols=141 Identities=19% Similarity=0.223 Sum_probs=67.3
Q ss_pred ccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCC--CCcccccCCCCCceeeCcCccccccCchhccCCCCC
Q 036258 128 SKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLR--TIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFL 205 (331)
Q Consensus 128 ~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~--~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L 205 (331)
.+|++|++++ ...+....+...+..+|.|+.|.+.+-.+. .+.....++++|..||+++..+... ..++.+++|
T Consensus 122 ~nL~~LdI~G--~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknL 197 (699)
T KOG3665|consen 122 QNLQHLDISG--SELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNL 197 (699)
T ss_pred HhhhhcCccc--cchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccH
Confidence 3556666643 222233334444445566666666554443 2223344555556666655555433 334455555
Q ss_pred CEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCccccCCCCC
Q 036258 206 SLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQEIGNLNGL 285 (331)
Q Consensus 206 ~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l~~L 285 (331)
+.|.+.+-.+... .....+.++++|+.||++....... +.... ...+.-..+|.|
T Consensus 198 q~L~mrnLe~e~~------~~l~~LF~L~~L~vLDIS~~~~~~~-~~ii~------------------qYlec~~~LpeL 252 (699)
T KOG3665|consen 198 QVLSMRNLEFESY------QDLIDLFNLKKLRVLDISRDKNNDD-TKIIE------------------QYLECGMVLPEL 252 (699)
T ss_pred HHHhccCCCCCch------hhHHHHhcccCCCeeeccccccccc-hHHHH------------------HHHHhcccCccc
Confidence 5555555444431 1222344555555555555443311 11111 111223346677
Q ss_pred CEEEccCCCCcc
Q 036258 286 IDLRLQDNDLNG 297 (331)
Q Consensus 286 ~~L~l~~n~l~~ 297 (331)
+.||.++..+.+
T Consensus 253 rfLDcSgTdi~~ 264 (699)
T KOG3665|consen 253 RFLDCSGTDINE 264 (699)
T ss_pred cEEecCCcchhH
Confidence 777777777654
No 62
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.81 E-value=3.2e-07 Score=78.72 Aligned_cols=136 Identities=19% Similarity=0.169 Sum_probs=70.6
Q ss_pred CCCCCceeeCcCcccc-ccCchhc-cCCCCCCEEEccCCc-ccCccCCCccccccccccCCCCcEEEeecccccccC-Cc
Q 036258 177 NASELTLLELGKNSFS-GLVPNTF-GNLRFLSLLDLGNNY-LTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGIL-PP 252 (331)
Q Consensus 177 ~l~~L~~L~l~~n~~~-~~~~~~l-~~~~~L~~L~l~~~~-l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~ 252 (331)
.+..|+.+..+++... ...-..+ .+..+|+.+-+++|. ++.. .+...-.+++.|+.+++..+...... ..
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~------~ft~l~rn~~~Le~l~~e~~~~~~d~tL~ 365 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDR------GFTMLGRNCPHLERLDLEECGLITDGTLA 365 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhh------hhhhhhcCChhhhhhcccccceehhhhHh
Confidence 3456666666654332 1111222 355677777777764 2221 12222345666777777665532111 12
Q ss_pred hhhhccccccEEEeccCccc-cc----CCccccCCCCCCEEEccCCCCc-ccCCcCccCCCCCCeEeccCCe
Q 036258 253 LIGNFSDSLQQFYAYDCELK-GS----IPQEIGNLNGLIDLRLQDNDLN-GTIPTTVGRLQQLQGLFLFGNN 318 (331)
Q Consensus 253 ~~~~~~~~L~~L~l~~~~~~-~~----~~~~l~~l~~L~~L~l~~n~l~-~~~~~~l~~l~~L~~L~l~~n~ 318 (331)
.++...+.++.+.+++|... ++ +...-.++..|..+-+++++.. +..-+.+..++.|+++++-+++
T Consensus 366 sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 366 SLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 22333347777777776543 21 1222244556677777777644 2333445667777777777665
No 63
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.71 E-value=0.00022 Score=62.80 Aligned_cols=137 Identities=23% Similarity=0.301 Sum_probs=84.8
Q ss_pred hcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCc-cccccCCccccCccc
Q 036258 51 FYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHN-KFTGRLPENIGNLSK 129 (331)
Q Consensus 51 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n-~~~~~~~~~~~~l~~ 129 (331)
+..+++++.|++++|.++ .+|. + ..+|+.|.+++|.-...+|..+ .++|++|++++| .+. .+|. .
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~-L---P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP~------s 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV-L---PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLPE------S 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC-C---CCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-cccc------c
Confidence 445688999999999888 8872 2 4579999999865434666544 358999999998 554 4443 4
Q ss_pred ccccccCccccccccccCCcchhcCCCCCcEEEcCCCCCC---CCcccccCCCCCceeeCcCccccccCchhccCCCCCC
Q 036258 130 LRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKLR---TIPNSITNASELTLLELGKNSFSGLVPNTFGNLRFLS 206 (331)
Q Consensus 130 L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~---~~~~~~~~l~~L~~L~l~~n~~~~~~~~~l~~~~~L~ 206 (331)
|+.|++.++....+. .+| ++|+.|.+.++... .++..+ .++|++|.+++|... ..|..+. .+|+
T Consensus 114 Le~L~L~~n~~~~L~-~LP-------ssLk~L~I~~~n~~~~~~lp~~L--PsSLk~L~Is~c~~i-~LP~~LP--~SLk 180 (426)
T PRK15386 114 VRSLEIKGSATDSIK-NVP-------NGLTSLSINSYNPENQARIDNLI--SPSLKTLSLTGCSNI-ILPEKLP--ESLQ 180 (426)
T ss_pred cceEEeCCCCCcccc-cCc-------chHhheecccccccccccccccc--CCcccEEEecCCCcc-cCccccc--ccCc
Confidence 666666543333221 222 35667776433211 122111 257888888887754 2333333 4788
Q ss_pred EEEccCCc
Q 036258 207 LLDLGNNY 214 (331)
Q Consensus 207 ~L~l~~~~ 214 (331)
.|.++.+.
T Consensus 181 ~L~ls~n~ 188 (426)
T PRK15386 181 SITLHIEQ 188 (426)
T ss_pred EEEecccc
Confidence 88887653
No 64
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.53 E-value=3.3e-05 Score=62.72 Aligned_cols=110 Identities=25% Similarity=0.329 Sum_probs=64.8
Q ss_pred hhcCCCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCC--cccccCCccCcCCCCCCEEEccCccccc-cCCccccC
Q 036258 50 CFYNISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSN--GFFGQIPLSLSKCTQLQHLWLEHNKFTG-RLPENIGN 126 (331)
Q Consensus 50 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n--~i~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~ 126 (331)
++..+..|+.|++.+..++ .+-. |-.+++|+.|.++.| .+.+.++.....+|+|+++++++|++.. ..-..+..
T Consensus 38 l~d~~~~le~ls~~n~glt-t~~~--~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~ 114 (260)
T KOG2739|consen 38 LTDEFVELELLSVINVGLT-TLTN--FPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKE 114 (260)
T ss_pred ccccccchhhhhhhcccee-eccc--CCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhh
Confidence 4556677777878887766 3322 235889999999988 5554444444566999999999998762 11123345
Q ss_pred cccccccccCccccccccccCCcchhcCCCCCcEEEc
Q 036258 127 LSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLAL 163 (331)
Q Consensus 127 l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l 163 (331)
+.+|..|++.++...+.. ..-..+|.-+++|++++-
T Consensus 115 l~nL~~Ldl~n~~~~~l~-dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 115 LENLKSLDLFNCSVTNLD-DYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hcchhhhhcccCCccccc-cHHHHHHHHhhhhccccc
Confidence 556666666544443321 111223334455554443
No 65
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=97.21 E-value=1.1e-05 Score=69.56 Aligned_cols=136 Identities=21% Similarity=0.150 Sum_probs=87.9
Q ss_pred CCCCCcEEEcCCCCC-CC--CcccccCCCCCceeeCcCccc-cccCchhc-cCCCCCCEEEccCCcccCccCCCcccccc
Q 036258 154 SLPNLKWLALGMNKL-RT--IPNSITNASELTLLELGKNSF-SGLVPNTF-GNLRFLSLLDLGNNYLTTRSSTTEWSFLS 228 (331)
Q Consensus 154 ~l~~L~~L~l~~~~l-~~--~~~~~~~l~~L~~L~l~~n~~-~~~~~~~l-~~~~~L~~L~l~~~~l~~~~~~~~~~~~~ 228 (331)
.+..|++++.+++.- +. +..-..+..+|+.+.+.+++- ++..-..+ .+++.|+.+++..+...... .+..
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~-----tL~s 366 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDG-----TLAS 366 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhh-----hHhh
Confidence 567788888866653 21 123335568999999998863 22211223 46788999999988665421 3455
Q ss_pred ccccCCCCcEEEeecccc-cccCCchh---hhccccccEEEeccCccc-ccCCccccCCCCCCEEEccCCC
Q 036258 229 SLTNCIYLKVLGLHSNQL-SGILPPLI---GNFSDSLQQFYAYDCELK-GSIPQEIGNLNGLIDLRLQDND 294 (331)
Q Consensus 229 ~~~~~~~L~~L~l~~n~~-~~~~~~~~---~~~~~~L~~L~l~~~~~~-~~~~~~l~~l~~L~~L~l~~n~ 294 (331)
.-.+++.|+.+.++.+.. +++.-..+ ......++.+.|.++..+ +..-+.+..+++|+.+++-++.
T Consensus 367 ls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~Le~l~~c~~Leri~l~~~q 437 (483)
T KOG4341|consen 367 LSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDATLEHLSICRNLERIELIDCQ 437 (483)
T ss_pred hccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHHHHHHhhCcccceeeeechh
Confidence 567889999999997653 22211111 122237888999999765 3445567788899998887665
No 66
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.04 E-value=0.00023 Score=57.91 Aligned_cols=59 Identities=31% Similarity=0.329 Sum_probs=29.6
Q ss_pred CCCCcEEEcCCCCCCCCc--ccccCCCCCceeeCcCccccccC---chhccCCCCCCEEEccCC
Q 036258 155 LPNLKWLALGMNKLRTIP--NSITNASELTLLELGKNSFSGLV---PNTFGNLRFLSLLDLGNN 213 (331)
Q Consensus 155 l~~L~~L~l~~~~l~~~~--~~~~~l~~L~~L~l~~n~~~~~~---~~~l~~~~~L~~L~l~~~ 213 (331)
+|+|+++++++|++..+. ..+..+.+|..|++..|...... ...|.-+++|++|+-...
T Consensus 90 ~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv 153 (260)
T KOG2739|consen 90 APNLKVLNLSGNKIKDLSTLRPLKELENLKSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDV 153 (260)
T ss_pred CCceeEEeecCCccccccccchhhhhcchhhhhcccCCccccccHHHHHHHHhhhhcccccccc
Confidence 356666666666655321 23344455666666666544311 123444566666654443
No 67
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=97.02 E-value=0.00032 Score=34.20 Aligned_cols=22 Identities=50% Similarity=0.612 Sum_probs=17.2
Q ss_pred CCCeEeccCCeeeecCCccccCC
Q 036258 308 QLQGLFLFGNNLQGSIPSDLCHW 330 (331)
Q Consensus 308 ~L~~L~l~~n~~~~~~p~~~~~~ 330 (331)
+|++|++++|+++ .+|+.|++|
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT-
T ss_pred CccEEECCCCcCE-eCChhhcCC
Confidence 4788888888888 888887764
No 68
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.01 E-value=2e-05 Score=64.53 Aligned_cols=98 Identities=20% Similarity=0.274 Sum_probs=42.5
Q ss_pred CCceeeCcCccccccCchhccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCC-chhhhcc
Q 036258 180 ELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILP-PLIGNFS 258 (331)
Q Consensus 180 ~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~-~~~~~~~ 258 (331)
+++.|++-+|.+.++ .....++.|++|.|+-|+|++. ..+..|++|++|.|..|.|.+..- ..+..++
T Consensus 20 ~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL---------~pl~rCtrLkElYLRkN~I~sldEL~YLknlp 88 (388)
T KOG2123|consen 20 NVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL---------APLQRCTRLKELYLRKNCIESLDELEYLKNLP 88 (388)
T ss_pred HhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc---------hhHHHHHHHHHHHHHhcccccHHHHHHHhcCc
Confidence 344444444444432 2233444555555555554431 224445555555555554431111 1122222
Q ss_pred ccccEEEeccCcccccCCc-----cccCCCCCCEEE
Q 036258 259 DSLQQFYAYDCELKGSIPQ-----EIGNLNGLIDLR 289 (331)
Q Consensus 259 ~~L~~L~l~~~~~~~~~~~-----~l~~l~~L~~L~ 289 (331)
+|+.|.|..|...+..+. ++.-+|+|+.||
T Consensus 89 -sLr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 89 -SLRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred -hhhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 455555544444433221 445566666664
No 69
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.97 E-value=2.5e-05 Score=63.98 Aligned_cols=77 Identities=30% Similarity=0.489 Sum_probs=38.3
Q ss_pred CccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCC-ccccCcccccccc
Q 036258 56 SLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLP-ENIGNLSKLRSLV 134 (331)
Q Consensus 56 ~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~ 134 (331)
+.+.|++-||++. .| .++..|+.|++|.|+-|+|+... .+..+.+|++|+|..|.+....- ..+.++++|+.|-
T Consensus 20 ~vkKLNcwg~~L~-DI--sic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LW 94 (388)
T KOG2123|consen 20 NVKKLNCWGCGLD-DI--SICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLW 94 (388)
T ss_pred HhhhhcccCCCcc-HH--HHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHh
Confidence 3445555555554 22 23345666666666666555332 24555666666666665541110 2334555555555
Q ss_pred cCc
Q 036258 135 LGH 137 (331)
Q Consensus 135 l~~ 137 (331)
|..
T Consensus 95 L~E 97 (388)
T KOG2123|consen 95 LDE 97 (388)
T ss_pred hcc
Confidence 533
No 70
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.85 E-value=0.00058 Score=62.90 Aligned_cols=34 Identities=26% Similarity=0.158 Sum_probs=16.9
Q ss_pred CCEEEccCCCCcc-cCCcCccC-CCCCCeEeccCCe
Q 036258 285 LIDLRLQDNDLNG-TIPTTVGR-LQQLQGLFLFGNN 318 (331)
Q Consensus 285 L~~L~l~~n~l~~-~~~~~l~~-l~~L~~L~l~~n~ 318 (331)
++.|+++.+.... ..-..... +..++.+++.++.
T Consensus 403 l~~L~l~~~~~~t~~~l~~~~~~~~~~~~l~~~~~~ 438 (482)
T KOG1947|consen 403 LRVLNLSDCRLVTDKGLRCLADSCSNLKDLDLSGCR 438 (482)
T ss_pred cceEecccCccccccchHHHhhhhhccccCCccCcc
Confidence 5677776665431 11111111 4556667676665
No 71
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.82 E-value=1.4e-05 Score=72.43 Aligned_cols=138 Identities=22% Similarity=0.250 Sum_probs=78.8
Q ss_pred CCcEEEcCCCCCC-----CCcccccCCCCCceeeCcCccccc----cCchhc----cCCCCCCEEEccCCcccCccCCCc
Q 036258 157 NLKWLALGMNKLR-----TIPNSITNASELTLLELGKNSFSG----LVPNTF----GNLRFLSLLDLGNNYLTTRSSTTE 223 (331)
Q Consensus 157 ~L~~L~l~~~~l~-----~~~~~~~~l~~L~~L~l~~n~~~~----~~~~~l----~~~~~L~~L~l~~~~l~~~~~~~~ 223 (331)
.+++|.+..|.++ .+...+.....++.++++.|.+.. ..+..+ ....++++|++++|.++.....
T Consensus 145 ~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~-- 222 (478)
T KOG4308|consen 145 LLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCA-- 222 (478)
T ss_pred HHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHH--
Confidence 3445555555554 234555556677777777776531 112222 2356788888888877643222
Q ss_pred cccccccccCCC-CcEEEeecccccccCC----chhhhccccccEEEeccCccccc----CCccccCCCCCCEEEccCCC
Q 036258 224 WSFLSSLTNCIY-LKVLGLHSNQLSGILP----PLIGNFSDSLQQFYAYDCELKGS----IPQEIGNLNGLIDLRLQDND 294 (331)
Q Consensus 224 ~~~~~~~~~~~~-L~~L~l~~n~~~~~~~----~~~~~~~~~L~~L~l~~~~~~~~----~~~~l~~l~~L~~L~l~~n~ 294 (331)
.+...+...+. +..|++..|.+.+... +.+......++++++..|.+++. +...+..+++++.+.+..|+
T Consensus 223 -~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~ 301 (478)
T KOG4308|consen 223 -LLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNP 301 (478)
T ss_pred -HHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCc
Confidence 23334445555 5667887777664422 22222323567777777777743 34445566677777777777
Q ss_pred Ccc
Q 036258 295 LNG 297 (331)
Q Consensus 295 l~~ 297 (331)
+..
T Consensus 302 l~~ 304 (478)
T KOG4308|consen 302 LTD 304 (478)
T ss_pred ccc
Confidence 663
No 72
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=95.68 E-value=0.0016 Score=59.99 Aligned_cols=113 Identities=24% Similarity=0.214 Sum_probs=55.4
Q ss_pred CCCCccEEEcCCCc-CccCC-ChhhhcCCCCCcEEEccCC-cccccC----CccCcCCCCCCEEEccCcc-ccccCCccc
Q 036258 53 NISSLKMIRLSSNS-LSGSL-PNDLCNRLPSLEQLVLRSN-GFFGQI----PLSLSKCTQLQHLWLEHNK-FTGRLPENI 124 (331)
Q Consensus 53 ~~~~L~~L~l~~~~-i~~~~-~~~~~~~~~~L~~L~L~~n-~i~~~~----~~~~~~l~~L~~L~l~~n~-~~~~~~~~~ 124 (331)
.++.|+.|.+.++. +. .. -..+...+++|+.|+++++ ...... ......+++|+.++++++. ++...-..+
T Consensus 186 ~~~~L~~l~l~~~~~~~-~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l 264 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKIT-DDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSAL 264 (482)
T ss_pred hCchhhHhhhcccccCC-hhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHH
Confidence 45677777776663 33 21 1223356777777777652 111111 1122345667777777665 442222222
Q ss_pred cC-cccccccccCccccccccccCCcchhcCCCCCcEEEcCCCCC
Q 036258 125 GN-LSKLRSLVLGHKAHNSLHGHLPSTLSVSLPNLKWLALGMNKL 168 (331)
Q Consensus 125 ~~-l~~L~~L~l~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l 168 (331)
+. +++|++|.+.+... ++......+...++.|++|++.++..
T Consensus 265 ~~~c~~L~~L~l~~c~~--lt~~gl~~i~~~~~~L~~L~l~~c~~ 307 (482)
T KOG1947|consen 265 ASRCPNLETLSLSNCSN--LTDEGLVSIAERCPSLRELDLSGCHG 307 (482)
T ss_pred HhhCCCcceEccCCCCc--cchhHHHHHHHhcCcccEEeeecCcc
Confidence 22 55666666422111 22222333444566677777765543
No 73
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=95.45 E-value=0.0078 Score=27.13 Aligned_cols=16 Identities=44% Similarity=0.561 Sum_probs=7.2
Q ss_pred CCCeEeccCCeeeecCC
Q 036258 308 QLQGLFLFGNNLQGSIP 324 (331)
Q Consensus 308 ~L~~L~l~~n~~~~~~p 324 (331)
+|+.|++++|+++ ++|
T Consensus 2 ~L~~L~l~~n~L~-~lP 17 (17)
T PF13504_consen 2 NLRTLDLSNNRLT-SLP 17 (17)
T ss_dssp T-SEEEETSS--S-SE-
T ss_pred ccCEEECCCCCCC-CCc
Confidence 4666666666655 443
No 74
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=95.35 E-value=5.6e-05 Score=68.70 Aligned_cols=188 Identities=24% Similarity=0.272 Sum_probs=84.4
Q ss_pred ccEEEcCCCcCccCCCh---hhhcCCCCCcEEEccCCccccc----CCccCcCC-CCCCEEEccCccccc----cCCccc
Q 036258 57 LKMIRLSSNSLSGSLPN---DLCNRLPSLEQLVLRSNGFFGQ----IPLSLSKC-TQLQHLWLEHNKFTG----RLPENI 124 (331)
Q Consensus 57 L~~L~l~~~~i~~~~~~---~~~~~~~~L~~L~L~~n~i~~~----~~~~~~~l-~~L~~L~l~~n~~~~----~~~~~~ 124 (331)
+..|.+.+|.+.+.... ..+...+.|..|++++|.+... +-..+... ..+++|++..|.++. .+...+
T Consensus 89 l~~L~L~~~~l~~~~~~~l~~~l~t~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L 168 (478)
T KOG4308|consen 89 LLHLSLANNRLGDRGAEELAQALKTLPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVL 168 (478)
T ss_pred HHHhhhhhCccccchHHHHHHHhcccccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHH
Confidence 55555655555422111 1224455566666666554310 00111221 344555555554442 222333
Q ss_pred cCcccccccccCccccccccccCCcch----hcCCCCCcEEEcCCCCCCC-----CcccccCCCC-CceeeCcCcccccc
Q 036258 125 GNLSKLRSLVLGHKAHNSLHGHLPSTL----SVSLPNLKWLALGMNKLRT-----IPNSITNASE-LTLLELGKNSFSGL 194 (331)
Q Consensus 125 ~~l~~L~~L~l~~~~~~~~~~~~~~~~----~~~l~~L~~L~l~~~~l~~-----~~~~~~~l~~-L~~L~l~~n~~~~~ 194 (331)
.....++.++++.|............. +....++++|++.++.++. +...+...+. +.++++..|.+.+.
T Consensus 169 ~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~ 248 (478)
T KOG4308|consen 169 EKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDV 248 (478)
T ss_pred hcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchH
Confidence 344555555554444432221111111 1134556666666665541 1233333333 45566666655432
Q ss_pred ----CchhccCC-CCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeeccccc
Q 036258 195 ----VPNTFGNL-RFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLS 247 (331)
Q Consensus 195 ----~~~~l~~~-~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 247 (331)
....+..+ ..++++++..|.++.-... .+...+..++.++.+.++.|.+.
T Consensus 249 g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~---~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 249 GVEKLLPCLSVLSETLRVLDLSRNSITEKGVR---DLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHHHHhcccchhhhhhhhhcCCccccchH---HHHHHHhhhHHHHHhhcccCccc
Confidence 11233333 4456666666666553322 23444455556666666666554
No 75
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.04 E-value=0.011 Score=28.65 Aligned_cols=11 Identities=9% Similarity=-0.016 Sum_probs=4.3
Q ss_pred cEEEeccCccc
Q 036258 262 QQFYAYDCELK 272 (331)
Q Consensus 262 ~~L~l~~~~~~ 272 (331)
++|++++|+++
T Consensus 3 ~~Ldls~n~l~ 13 (22)
T PF00560_consen 3 EYLDLSGNNLT 13 (22)
T ss_dssp SEEEETSSEES
T ss_pred cEEECCCCcCE
Confidence 33344444333
No 76
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=94.97 E-value=0.028 Score=28.47 Aligned_cols=23 Identities=39% Similarity=0.585 Sum_probs=16.9
Q ss_pred CCCccEEEcCCCcCccCCChhhhc
Q 036258 54 ISSLKMIRLSSNSLSGSLPNDLCN 77 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~~~~~~~~~~ 77 (331)
+++|+.|++++|++. .+|..+|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHcc
Confidence 356788888888887 77777654
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=94.97 E-value=0.028 Score=28.47 Aligned_cols=23 Identities=39% Similarity=0.585 Sum_probs=16.9
Q ss_pred CCCccEEEcCCCcCccCCChhhhc
Q 036258 54 ISSLKMIRLSSNSLSGSLPNDLCN 77 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~~~~~~~~~~ 77 (331)
+++|+.|++++|++. .+|..+|.
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~f~ 23 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPPGAFQ 23 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHHcc
Confidence 356788888888887 77777654
No 78
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=93.23 E-value=0.0096 Score=29.55 Aligned_cols=20 Identities=25% Similarity=0.194 Sum_probs=10.5
Q ss_pred CCCCeEeccCCeeeecCCcc
Q 036258 307 QQLQGLFLFGNNLQGSIPSD 326 (331)
Q Consensus 307 ~~L~~L~l~~n~~~~~~p~~ 326 (331)
++|++|++++|.+++..+..
T Consensus 2 ~~L~~L~l~~n~i~~~g~~~ 21 (24)
T PF13516_consen 2 PNLETLDLSNNQITDEGASA 21 (24)
T ss_dssp TT-SEEE-TSSBEHHHHHHH
T ss_pred CCCCEEEccCCcCCHHHHHH
Confidence 45666666666666544433
No 79
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=92.25 E-value=0.1 Score=26.29 Aligned_cols=21 Identities=38% Similarity=0.491 Sum_probs=15.0
Q ss_pred CCCCCeEeccCCeeeecCCccc
Q 036258 306 LQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 306 l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
+++|++|++++|.++ .+|+..
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~ 21 (26)
T smart00369 1 LPNLRELDLSNNQLS-SLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHH
Confidence 356778888888887 777643
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=92.25 E-value=0.1 Score=26.29 Aligned_cols=21 Identities=38% Similarity=0.491 Sum_probs=15.0
Q ss_pred CCCCCeEeccCCeeeecCCccc
Q 036258 306 LQQLQGLFLFGNNLQGSIPSDL 327 (331)
Q Consensus 306 l~~L~~L~l~~n~~~~~~p~~~ 327 (331)
+++|++|++++|.++ .+|+..
T Consensus 1 L~~L~~L~L~~N~l~-~lp~~~ 21 (26)
T smart00370 1 LPNLRELDLSNNQLS-SLPPGA 21 (26)
T ss_pred CCCCCEEECCCCcCC-cCCHHH
Confidence 356778888888887 777643
No 81
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.61 E-value=0.018 Score=45.34 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=20.7
Q ss_pred CCceeeCcCccccccCchhccCCCCCCEEEccCC
Q 036258 180 ELTLLELGKNSFSGLVPNTFGNLRFLSLLDLGNN 213 (331)
Q Consensus 180 ~L~~L~l~~n~~~~~~~~~l~~~~~L~~L~l~~~ 213 (331)
.++.++.++..|..+.-+.+..++.++.|.+..|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~c 135 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANC 135 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccc
Confidence 4566666666665554455666666666666555
No 82
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=90.21 E-value=0.19 Score=25.37 Aligned_cols=18 Identities=33% Similarity=0.488 Sum_probs=13.8
Q ss_pred CCCCeEeccCCeeeecCCc
Q 036258 307 QQLQGLFLFGNNLQGSIPS 325 (331)
Q Consensus 307 ~~L~~L~l~~n~~~~~~p~ 325 (331)
++|+.|++++|+++ ++|+
T Consensus 2 ~~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 2 PSLKELNVSNNQLT-SLPE 19 (26)
T ss_pred cccceeecCCCccc-cCcc
Confidence 35778888888888 7776
No 83
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=87.04 E-value=0.015 Score=46.90 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=45.1
Q ss_pred CCCccEEEcCCCcCccCCChhhhcCCCCCcEEEccCCcccccCCccCcCCCCCCEEEccCccccccCCccccCccccccc
Q 036258 54 ISSLKMIRLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFTGRLPENIGNLSKLRSL 133 (331)
Q Consensus 54 ~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 133 (331)
+...++||++.+++. .+...+ .-+..+..|+++.|.+. ..|+.++....++.+++.+|..+ ..|.++...+.++++
T Consensus 41 ~kr~tvld~~s~r~v-n~~~n~-s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 41 FKRVTVLDLSSNRLV-NLGKNF-SILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKN 116 (326)
T ss_pred cceeeeehhhhhHHH-hhccch-HHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchh
Confidence 355566666666554 333332 34555666666666554 55555666666666666655555 556666666666666
Q ss_pred ccCc
Q 036258 134 VLGH 137 (331)
Q Consensus 134 ~l~~ 137 (331)
++.+
T Consensus 117 e~k~ 120 (326)
T KOG0473|consen 117 EQKK 120 (326)
T ss_pred hhcc
Confidence 6543
No 84
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=86.42 E-value=0.18 Score=39.99 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=39.7
Q ss_pred CCcEEEcCCCCCCCCc-ccccCCCCCceeeCcCcccccc-Cchhcc-CCCCCCEEEccCC-cccCccCCCcccccccccc
Q 036258 157 NLKWLALGMNKLRTIP-NSITNASELTLLELGKNSFSGL-VPNTFG-NLRFLSLLDLGNN-YLTTRSSTTEWSFLSSLTN 232 (331)
Q Consensus 157 ~L~~L~l~~~~l~~~~-~~~~~l~~L~~L~l~~n~~~~~-~~~~l~-~~~~L~~L~l~~~-~l~~~~~~~~~~~~~~~~~ 232 (331)
.+++++-+++.+.... ..+..++.++.|.+.+|.--+. .-+-++ -.++|+.|++++| .|+. .....+..
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~-------~GL~~L~~ 174 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITD-------GGLACLLK 174 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeech-------hHHHHHHH
Confidence 3556666666554221 3455556666666665543211 001111 2456667777666 4444 23334555
Q ss_pred CCCCcEEEeec
Q 036258 233 CIYLKVLGLHS 243 (331)
Q Consensus 233 ~~~L~~L~l~~ 243 (331)
+++|+.|.+.+
T Consensus 175 lknLr~L~l~~ 185 (221)
T KOG3864|consen 175 LKNLRRLHLYD 185 (221)
T ss_pred hhhhHHHHhcC
Confidence 66666665554
No 85
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=79.58 E-value=0.051 Score=43.94 Aligned_cols=89 Identities=15% Similarity=0.125 Sum_probs=57.6
Q ss_pred ccCCCCCCEEEccCCcccCccCCCccccccccccCCCCcEEEeecccccccCCchhhhccccccEEEeccCcccccCCcc
Q 036258 199 FGNLRFLSLLDLGNNYLTTRSSTTEWSFLSSLTNCIYLKVLGLHSNQLSGILPPLIGNFSDSLQQFYAYDCELKGSIPQE 278 (331)
Q Consensus 199 l~~~~~L~~L~l~~~~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 278 (331)
+......+.||++.|++.... ..++-++.+..|+++.|++. ..|.++.+.. .+.++++..|... ..|.+
T Consensus 38 i~~~kr~tvld~~s~r~vn~~--------~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~-e~~~~~~~~n~~~-~~p~s 106 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNLG--------KNFSILTRLVRLDLSKNQIK-FLPKDAKQQR-ETVNAASHKNNHS-QQPKS 106 (326)
T ss_pred hhccceeeeehhhhhHHHhhc--------cchHHHHHHHHHhccHhhHh-hChhhHHHHH-HHHHHHhhccchh-hCCcc
Confidence 334455666666666554322 22555666777777777775 6677766655 6666676666655 67777
Q ss_pred ccCCCCCCEEEccCCCCccc
Q 036258 279 IGNLNGLIDLRLQDNDLNGT 298 (331)
Q Consensus 279 l~~l~~L~~L~l~~n~l~~~ 298 (331)
++..+.++.++..+|.+...
T Consensus 107 ~~k~~~~k~~e~k~~~~~~~ 126 (326)
T KOG0473|consen 107 QKKEPHPKKNEQKKTEFFRK 126 (326)
T ss_pred ccccCCcchhhhccCcchHH
Confidence 88888888888877776543
No 86
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=74.88 E-value=2.7 Score=21.23 Aligned_cols=13 Identities=31% Similarity=0.509 Sum_probs=6.1
Q ss_pred CccEEEcCCCcCc
Q 036258 56 SLKMIRLSSNSLS 68 (331)
Q Consensus 56 ~L~~L~l~~~~i~ 68 (331)
+|+.|++++|.|+
T Consensus 3 ~L~~L~L~~NkI~ 15 (26)
T smart00365 3 NLEELDLSQNKIK 15 (26)
T ss_pred ccCEEECCCCccc
Confidence 4444555444443
No 87
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=74.08 E-value=2.3 Score=21.82 Aligned_cols=15 Identities=33% Similarity=0.301 Sum_probs=11.1
Q ss_pred CCCCeEeccCCeeee
Q 036258 307 QQLQGLFLFGNNLQG 321 (331)
Q Consensus 307 ~~L~~L~l~~n~~~~ 321 (331)
++|++|++++|.+..
T Consensus 2 ~~L~~LdL~~N~i~~ 16 (28)
T smart00368 2 PSLRELDLSNNKLGD 16 (28)
T ss_pred CccCEEECCCCCCCH
Confidence 467888888888763
No 88
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=73.68 E-value=1.5 Score=40.30 Aligned_cols=16 Identities=31% Similarity=0.258 Sum_probs=7.7
Q ss_pred CCCCCEEEccCCcccC
Q 036258 202 LRFLSLLDLGNNYLTT 217 (331)
Q Consensus 202 ~~~L~~L~l~~~~l~~ 217 (331)
.+.+..+.+++|++..
T Consensus 217 ~p~i~sl~lsnNrL~~ 232 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYH 232 (585)
T ss_pred Ccceeeeecccchhhc
Confidence 3444445555555444
No 89
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=61.57 E-value=3.3 Score=38.11 Aligned_cols=68 Identities=22% Similarity=0.161 Sum_probs=42.6
Q ss_pred cccCCCCcEEEeecccccccCC-chhhhccccccEEEeccCcccccCCccccCC--CCCCEEEccCCCCcc
Q 036258 230 LTNCIYLKVLGLHSNQLSGILP-PLIGNFSDSLQQFYAYDCELKGSIPQEIGNL--NGLIDLRLQDNDLNG 297 (331)
Q Consensus 230 ~~~~~~L~~L~l~~n~~~~~~~-~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~l--~~L~~L~l~~n~l~~ 297 (331)
-.+.+.+..+++++|++..... ..+..-.+.+..|+|++|...-....++.++ ..|++|.+.||++..
T Consensus 214 ~~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~ 284 (585)
T KOG3763|consen 214 EENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCT 284 (585)
T ss_pred hcCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCcccc
Confidence 3466788899999998752211 2344444589999999983221122223222 347899999999874
No 90
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=53.59 E-value=9 Score=19.01 Aligned_cols=15 Identities=27% Similarity=0.279 Sum_probs=11.6
Q ss_pred CCCCCeEeccCCe-ee
Q 036258 306 LQQLQGLFLFGNN-LQ 320 (331)
Q Consensus 306 l~~L~~L~l~~n~-~~ 320 (331)
+++|++|++++|. ++
T Consensus 1 c~~L~~L~l~~C~~it 16 (26)
T smart00367 1 CPNLRELDLSGCTNIT 16 (26)
T ss_pred CCCCCEeCCCCCCCcC
Confidence 4678889998886 55
No 91
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=37.63 E-value=25 Score=39.37 Aligned_cols=31 Identities=29% Similarity=0.588 Sum_probs=21.6
Q ss_pred EcCCCcCccCCChhhhcCCCCCcEEEccCCcc
Q 036258 61 RLSSNSLSGSLPNDLCNRLPSLEQLVLRSNGF 92 (331)
Q Consensus 61 ~l~~~~i~~~~~~~~~~~~~~L~~L~L~~n~i 92 (331)
||++|.|. .++...|..+++|+.|+|++|.+
T Consensus 1 DLSnN~Ls-tLp~g~F~~L~sL~~LdLsgNPw 31 (2740)
T TIGR00864 1 DISNNKIS-TIEEGICANLCNLSEIDLSGNPF 31 (2740)
T ss_pred CCCCCcCC-ccChHHhccCCCceEEEeeCCcc
Confidence 46677776 67777777777777777777654
No 92
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=34.08 E-value=56 Score=18.44 Aligned_cols=26 Identities=42% Similarity=0.544 Sum_probs=18.1
Q ss_pred hhhHHHHHHHHHhcc-CCCCCCCcchh
Q 036258 26 TTDQSALLAFKAHIA-DPYSVLTKNCF 51 (331)
Q Consensus 26 ~~~~~~l~~~~~~~~-~~~~~~~~~~~ 51 (331)
..+..+|+.||..+. ++...+..|..
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~ 28 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNP 28 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--T
T ss_pred cHHHHHHHHHHHhcccccCcccccCCC
Confidence 467889999999988 46667777754
No 93
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=28.38 E-value=3.5e+02 Score=25.15 Aligned_cols=59 Identities=25% Similarity=0.233 Sum_probs=26.2
Q ss_pred ccEEEcCCCcCccCCChhh--hcCCCCCcEEEccCCccc---ccCCccCcCCCCCCEEEccCcc
Q 036258 57 LKMIRLSSNSLSGSLPNDL--CNRLPSLEQLVLRSNGFF---GQIPLSLSKCTQLQHLWLEHNK 115 (331)
Q Consensus 57 L~~L~l~~~~i~~~~~~~~--~~~~~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~l~~n~ 115 (331)
+++++++.+...+.+|..+ ...-.-++.++.+...+. ...+-.++.-.+++..+++.|.
T Consensus 216 lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng 279 (553)
T KOG4242|consen 216 LTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNG 279 (553)
T ss_pred ccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCC
Confidence 5566666666555555432 111223444444444332 1111222334455555555553
No 94
>smart00446 LRRcap occurring C-terminal to leucine-rich repeats. A motif occurring C-terminal to leucine-rich repeats in "sds22-like" and "typical" LRR-containing proteins.
Probab=22.13 E-value=43 Score=16.94 Aligned_cols=14 Identities=29% Similarity=0.403 Sum_probs=8.8
Q ss_pred hhcCCCCCcEEEcc
Q 036258 75 LCNRLPSLEQLVLR 88 (331)
Q Consensus 75 ~~~~~~~L~~L~L~ 88 (331)
+|..+|+|+.||..
T Consensus 8 Vi~~LPqL~~LD~~ 21 (26)
T smart00446 8 VIRLLPQLRKLDXX 21 (26)
T ss_pred HHHHCCccceeccc
Confidence 44567777777654
No 95
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=21.26 E-value=54 Score=37.01 Aligned_cols=32 Identities=16% Similarity=0.037 Sum_probs=28.2
Q ss_pred EccCCcccccCCccCcCCCCCCEEEccCcccc
Q 036258 86 VLRSNGFFGQIPLSLSKCTQLQHLWLEHNKFT 117 (331)
Q Consensus 86 ~L~~n~i~~~~~~~~~~l~~L~~L~l~~n~~~ 117 (331)
+|++|+|..+.+..|..+++|++|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 57899998777788899999999999999876
Done!