BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036263
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 319 bits (817), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/333 (50%), Positives = 208/333 (62%), Gaps = 54/333 (16%)
Query: 26 KKRPQISIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVT 85
K IQ +N +ST +TTV WTS I+ R+G + EAA EF+ M L G P+HITF+
Sbjct: 18 KNHANPKIQRHN-QSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIA 76
Query: 86 LLSGCADFPS--------------------NNVMVSTALLDMYAKFGRMDLATVVFDVM- 124
LLSGC DF S N+VMV TA++ MY+K GR A +VFD M
Sbjct: 77 LLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME 136
Query: 125 --------------------------------RGCDFWTALLNGFVKRDYFEEALEYFRV 152
R WTA++NGFVK+ Y EEAL +FR
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 153 MQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGC 212
MQISGV+PDY+ II+ LN C N+ L GLW+HRYV QDFK+NVRV N+L+D+Y R GC
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
+EFARQVF M KRT+VSWNS+IVGFA NG E+L YF MQ+ FK D V+FTGALTA
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 273 CSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
CSH GL+E+GL+YF IMK YR+SP+IEH+GC+
Sbjct: 317 CSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCL 349
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 35/234 (14%)
Query: 32 SIQTNNSKSTIDTT-----VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTL 86
S Q +N+ D + WT+ I+ + G EA L F M++ G P ++ +
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 87 LSGCADFPS-----------------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGC 127
L+ C + + NNV VS +L+D+Y + G ++ A VF M R
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 128 DFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRY 187
W +++ GF E+L YFR MQ G +PD +T L C++V + GL RY
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGL---RY 329
Query: 188 --VPKQDFKDNVRV--CNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVG 237
+ K D++ + R+ L+D+YSR G +E A ++ Q M + N +++G
Sbjct: 330 FQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKP----NEVVIG 379
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 30/139 (21%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTA 103
T V W S I +G E+ + F +M+ G P +TF L+ C
Sbjct: 271 TVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTAC------------- 317
Query: 104 LLDMYAKFGRMDLATVVFDVMRGCDF--------WTALLNGFVKRDYFEEALEYFRVMQI 155
+ G ++ F +M+ CD+ + L++ + + E+AL+ + M +
Sbjct: 318 -----SHVGLVEEGLRYFQIMK-CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPM 371
Query: 156 SGVEPDYLTIISVLNVCAN 174
+P+ + I S+L C+N
Sbjct: 372 ---KPNEVVIGSLLAACSN 387
>sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protein At2g20540
OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1
Length = 534
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 82/211 (38%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQ 154
+V+ +LL YA+ G+M A +F +M + WTA+++G+ + EA+++FR MQ
Sbjct: 174 DVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQ 233
Query: 155 ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIE 214
++G+EPD +++ISVL CA + +L +G W+H Y ++ F VCN L+++YS+ G I
Sbjct: 234 LAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVIS 293
Query: 215 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACS 274
A Q+F +M + ++SW+++I G+A +G A+E FN MQ+ K + ++F G L+ACS
Sbjct: 294 QAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACS 353
Query: 275 HAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
H G+ ++GL+YFD+M++ Y++ P+IEH+GC+
Sbjct: 354 HVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS-------- 95
T V WT+ IS + GC +EA F M+L G P I+ +++L CA S
Sbjct: 205 TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIH 264
Query: 96 ---------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFE 144
V AL++MY+K G + A +F M G D W+ +++G+
Sbjct: 265 LYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAH 324
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMH--RY--VPKQDFKDNVRV- 199
A+E F MQ + V+P+ +T + +L+ C++V G+W RY + +QD++ ++
Sbjct: 325 GAIETFNEMQRAKVKPNGITFLGLLSACSHV-----GMWQEGLRYFDMMRQDYQIEPKIE 379
Query: 200 -CNTLMDVYSRFGCIEFARQVFQRM 223
L+DV +R G +E A ++ + M
Sbjct: 380 HYGCLIDVLARAGKLERAVEITKTM 404
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 95 SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYFRV 152
S + + T ++D K MD AT +F+ + + + +++ + + + + ++
Sbjct: 39 SQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQ 98
Query: 153 MQISGVE-PDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFG 211
+ E PD T + CA++ + +G +H ++ K + +V N L+D+Y +F
Sbjct: 99 LLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFD 158
Query: 212 CIEFARQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFVG 245
+ A +VF M++R ++SWNS++ G+A ++G+ G
Sbjct: 159 DLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTG 218
Query: 246 -----EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
EA+++F MQ + DE+S L +C+ G +E G
Sbjct: 219 IGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 156/311 (50%), Gaps = 50/311 (16%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLS---------------- 88
V W + I R+CR G + EA F M+ P + ++S
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 89 ------------------------GCADFPSN--------NVMVSTALLDMYAKFGRMDL 116
GC D N+ VSTA++ Y+K GR+D
Sbjct: 237 FLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 117 ATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCAN 174
A V+FD D WT +++ +V+ DY +EAL F M SG++PD +++ SV++ CAN
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 175 VRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSI 234
+ L W+H + + + + N L+++Y++ G ++ R VF++M +R +VSW+S+
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 235 IVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYR 294
I +++G +AL F M++ + +EV+F G L CSH+GL+E+G + F M Y
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 295 VSPQIEHHGCI 305
++P++EH+GC+
Sbjct: 477 ITPKLEHYGCM 487
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 33/216 (15%)
Query: 100 VSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISG 157
V T +DMYA GR++ A VFD M D W ++ + + +EA + F M+ S
Sbjct: 148 VETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSN 207
Query: 158 VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFAR 217
V PD + + ++++ C + ++ ++ + D + + + L+ +Y+ GC++ AR
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 218 QVFQRM-------------------------------HKRTLVSWNSIIVGFAVNGFVGE 246
+ F++M K+ LV W ++I + + + E
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 247 ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
AL F M K D VS ++AC++ G+++
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTA 103
V W+S I+ G +A F RM+ P+ +TFV +L GC+ +
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS---------HSG 459
Query: 104 LLDMYAK-FGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISG 157
L++ K F M T +++ + + +++ F + + EALE M ++
Sbjct: 460 LVEEGKKIFASM---TDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 151/280 (53%), Gaps = 16/280 (5%)
Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNV--- 98
+ V WT+ IS ++ EA F+ M+ G P+ T+ +L+ + V
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQ 418
Query: 99 ----------MVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEA 146
V TALLD Y K G+++ A VF + D W+A+L G+ + E A
Sbjct: 419 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAA 478
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVR-TLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
++ F + G++P+ T S+LNVCA ++G G H + K ++ V + L+
Sbjct: 479 IKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLT 538
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+Y++ G IE A +VF+R ++ LVSWNS+I G+A +G +AL+ F M+K K D V+
Sbjct: 539 MYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVT 598
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F G AC+HAGL+E+G +YFDIM + +++P EH+ C+
Sbjct: 599 FIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 92/182 (50%), Gaps = 2/182 (1%)
Query: 96 NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVM 153
++V V T+L+D Y K VFD M R WT L++G+ + +E L F M
Sbjct: 126 DDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRM 185
Query: 154 QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCI 213
Q G +P+ T + L V A G GL +H V K + V N+L+++Y + G +
Sbjct: 186 QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNV 245
Query: 214 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
AR +F + +++V+WNS+I G+A NG EAL F M+ + E SF + C
Sbjct: 246 RKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Query: 274 SH 275
++
Sbjct: 306 AN 307
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 48/268 (17%)
Query: 39 KSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD------ 92
K+ + + V W S IS + +G LEA F MRL S +F +++ CA+
Sbjct: 254 KTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRF 313
Query: 93 --------------FPSNNVMVSTALLDMYAKFGRMDLATVVFDVMR-----GC----DF 129
F N + TAL+ Y+K T + D +R GC
Sbjct: 314 TEQLHCSVVKYGFLFDQN---IRTALMVAYSK------CTAMLDALRLFKEIGCVGNVVS 364
Query: 130 WTALLNGFVKRDYFEEALEYFRVMQISGVEPD---YLTIISVLNVCANVRTLGIGLWMHR 186
WTA+++GF++ D EEA++ F M+ GV P+ Y I++ L V + +H
Sbjct: 365 WTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE-------VHA 417
Query: 187 YVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 246
V K +++ + V L+D Y + G +E A +VF + + +V+W++++ G+A G
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 247 ALEYFNLMQKGVFKTDEVSFTGALTACS 274
A++ F + KG K +E +F+ L C+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCA 505
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 116/247 (46%), Gaps = 20/247 (8%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP----------- 94
V WT+ IS + R+ E F RM+ GT P+ TF L A+
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 95 ------SNNVMVSTALLDMYAKFGRMDLATVVFDV--MRGCDFWTALLNGFVKRDYFEEA 146
+ VS +L+++Y K G + A ++FD ++ W ++++G+ EA
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
L F M+++ V + SV+ +CAN++ L +H V K F + + LM
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVA 339
Query: 207 YSRFGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
YS+ + A ++F+ + +VSW ++I GF N EA++ F+ M++ + +E +
Sbjct: 340 YSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFT 399
Query: 266 FTGALTA 272
++ LTA
Sbjct: 400 YSVILTA 406
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 2/174 (1%)
Query: 120 VFDVMRGCD--FWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRT 177
+FD G D + +LL GF + +EA F + G+E D SVL V A +
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 178 LGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVG 237
G +H K F D+V V +L+D Y + + R+VF M +R +V+W ++I G
Sbjct: 109 ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISG 168
Query: 238 FAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKK 291
+A N E L F MQ + + +F AL + G+ GLQ ++ K
Sbjct: 169 YARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 169 bits (427), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 148/265 (55%), Gaps = 19/265 (7%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLS-------GCADFP---- 94
V WT+ IS + + +A L F +M +G +P+ T +++ GC
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 95 ------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEA 146
+NV V +ALLD+Y ++G MD A +VFD + R W AL+ G +R E+A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
LE F+ M G P + + S+ C++ L G W+H Y+ K K NTL+D+
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y++ G I AR++F R+ KR +VSWNS++ +A +GF EA+ +F M++ + +E+SF
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 267 TGALTACSHAGLIEDGLQYFDIMKK 291
LTACSH+GL+++G Y+++MKK
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKK 391
Score = 114 bits (285), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 2/189 (1%)
Query: 96 NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVM 153
+++++ LL+MYAK G ++ A VF+ M DF WT L++G+ + D +AL +F M
Sbjct: 93 HDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 154 QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCI 213
G P+ T+ SV+ A R G +H + K F NV V + L+D+Y+R+G +
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLM 212
Query: 214 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
+ A+ VF + R VSWN++I G A +ALE F M + F+ S+ AC
Sbjct: 213 DDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 274 SHAGLIEDG 282
S G +E G
Sbjct: 273 SSTGFLEQG 281
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 65/108 (60%)
Query: 167 SVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKR 226
++L C + L G +H ++ + F+ ++ + NTL+++Y++ G +E AR+VF++M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 227 TLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACS 274
V+W ++I G++ + +AL +FN M + + +E + + + A +
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA 172
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 167 bits (423), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 149/282 (52%), Gaps = 20/282 (7%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADF---------- 93
+ V +TS I+ + R G EA F M G +P T +L+ CA +
Sbjct: 361 SVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVH 420
Query: 94 ---PSNN----VMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFE 144
N+ + VS AL+DMYAK G M A +VF MR D W ++ G+ K Y
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYAN 480
Query: 145 EALEYFRVM-QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL 203
EAL F ++ + PD T+ VL CA++ G +H Y+ + + + V N+L
Sbjct: 481 EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL 540
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDE 263
+D+Y++ G + A +F + + LVSW +I G+ ++GF EA+ FN M++ + DE
Sbjct: 541 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 264 VSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
+SF L ACSH+GL+++G ++F+IM+ ++ P +EH+ CI
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 100 VSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISG 157
V +L+ Y K R+D A VFD M D W +++NG+V E+ L F M +SG
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 158 VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFAR 217
+E D TI+SV CA+ R + +G +H K F R CNTL+D+YS+ G ++ A+
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 218 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAG 277
VF+ M R++VS+ S+I G+A G GEA++ F M++ D + T L C+
Sbjct: 352 AVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 278 LIEDGLQYFDIMKK 291
L+++G + + +K+
Sbjct: 412 LLDEGKRVHEWIKE 425
Score = 88.2 bits (217), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 22/266 (8%)
Query: 37 NSKSTIDTTV-QWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS 95
+S +T D +V + + R C SG + A + +P T ++L CAD S
Sbjct: 52 DSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKS 109
Query: 96 -------------NNVMVSTALLD----MYAKFGRMDLATVVFDVMR--GCDFWTALLNG 136
N ++ + L MY G + A+ VFD ++ FW L+N
Sbjct: 110 LKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNE 169
Query: 137 FVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDN 196
K F ++ F+ M SGVE D T V +++R++ G +H ++ K F +
Sbjct: 170 LAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER 229
Query: 197 VRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQK 256
V N+L+ Y + ++ AR+VF M +R ++SWNSII G+ NG + L F M
Sbjct: 230 NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV 289
Query: 257 GVFKTDEVSFTGALTACSHAGLIEDG 282
+ D + C+ + LI G
Sbjct: 290 SGIEIDLATIVSVFAGCADSRLISLG 315
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 158/285 (55%), Gaps = 21/285 (7%)
Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS------ 95
+ V W + IS + +G EA F M P T VT++S CA S
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 96 -----------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDY 142
+N+ + AL+D+Y+K G ++ A +F+ + D W L+ G+ +
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 143 FEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPK--QDFKDNVRVC 200
++EAL F+ M SG P+ +T++S+L CA++ + IG W+H Y+ K + + +
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 201 NTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFK 260
+L+D+Y++ G IE A QVF + ++L SWN++I GFA++G + + F+ M+K +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 261 TDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
D+++F G L+ACSH+G+++ G F M + Y+++P++EH+GC+
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 109/191 (57%), Gaps = 2/191 (1%)
Query: 94 PSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFR 151
P +V+ TAL+ YA G ++ A +FD + D W A+++G+ + ++EALE F+
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 152 VMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFG 211
M + V PD T+++V++ CA ++ +G +H ++ F N+++ N L+D+YS+ G
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 212 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALT 271
+E A +F+R+ + ++SWN++I G+ EAL F M + ++V+ L
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 272 ACSHAGLIEDG 282
AC+H G I+ G
Sbjct: 376 ACAHLGAIDIG 386
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 33/207 (15%)
Query: 111 FGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISV 168
F + A VF ++ + W + G AL+ + M G+ P+ T V
Sbjct: 81 FEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFV 140
Query: 169 LNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTL 228
L CA + G +H +V K ++ V +L+ +Y + G +E A +VF + R +
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 229 VS-------------------------------WNSIIVGFAVNGFVGEALEYFNLMQKG 257
VS WN++I G+A G EALE F M K
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 258 VFKTDEVSFTGALTACSHAGLIEDGLQ 284
+ DE + ++AC+ +G IE G Q
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQ 287
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 5/212 (2%)
Query: 98 VMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQI 155
+ V +LL +YA G + A VFD M D W +++NGF + EEAL + M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 156 SGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEF 215
G++PD TI+S+L+ CA + L +G +H Y+ K N+ N L+D+Y+R G +E
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 216 ARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQ--KGVFKTDEVSFTGALTAC 273
A+ +F M + VSW S+IVG AVNGF EA+E F M+ +G+ E++F G L AC
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC-EITFVGILYAC 334
Query: 274 SHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
SH G++++G +YF M++ Y++ P+IEH GC+
Sbjct: 335 SHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 129 FWTALLNGFVKRDYFEEALEYFRVMQISG-VEPD---YLTIISVLNVCANVRTLGIGLWM 184
W L+ G+ + A +R M++SG VEPD Y +I + A+VR +G +
Sbjct: 87 IWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR---LGETI 143
Query: 185 HRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFV 244
H V + F + V N+L+ +Y+ G + A +VF +M ++ LV+WNS+I GFA NG
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 245 GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKI 292
EAL + M K D + L+AC+ G + G + M K+
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 105/220 (47%), Gaps = 24/220 (10%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V W S I+ +G EA +T M G P T V+LLS CA +
Sbjct: 188 VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVY 247
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEA 146
N+ S LLD+YA+ GR++ A +FD M + WT+L+ G + +EA
Sbjct: 248 MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 147 LEYFRVMQ-ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCN--TL 203
+E F+ M+ G+ P +T + +L C++ + G R + ++++K R+ + +
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM-REEYKIEPRIEHFGCM 366
Query: 204 MDVYSRFGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNG 242
+D+ +R G ++ A + + M + +V W +++ V+G
Sbjct: 367 VDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 153/280 (54%), Gaps = 19/280 (6%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP---------- 94
++ W++ ++ + ++G LEA F+RM G PS T V +L+ C+D
Sbjct: 287 SITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
Query: 95 -------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEE 145
++ +TAL+DMYAK G + A FD + R WT+L++G+V+ EE
Sbjct: 347 FLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEE 406
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
AL +R M+ +G+ P+ T+ SVL C+++ TL +G +H + K F V + + L
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+YS+ G +E VF+R + +VSWN++I G + NG EALE F M + D+V+
Sbjct: 467 MYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVT 526
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F ++ACSH G +E G YF++M + P+++H+ C+
Sbjct: 527 FVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 96 NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVM 153
++ V T+L+ MY K G ++ VF M R W+ +++G+ R EEA++ F +
Sbjct: 151 GDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLF 210
Query: 154 ---QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRF 210
+ G + DY+ +VL+ A +G+G +H K V + N L+ +YS+
Sbjct: 211 LREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKC 269
Query: 211 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
+ A ++F R ++W++++ G++ NG EA++ F+ M K E + G L
Sbjct: 270 ESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVL 329
Query: 271 TACSHAGLIEDGLQYFDIMKKI 292
ACS +E+G Q + K+
Sbjct: 330 NACSDICYLEEGKQLHSFLLKL 351
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 38/172 (22%)
Query: 158 VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFAR 217
+ P T++ L + R L G +H + + ++ N L++ Y++ G + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 218 QVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQK--------------GVFKTDE 263
+F + + +VSWNS+I G++ NG + + L ++ G+FK +
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 264 VSFTGALTACSH------------------------AGLIEDGLQYFDIMKK 291
+ + +H AGL+EDGL+ F M +
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPE 181
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 158/281 (56%), Gaps = 20/281 (7%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSG---CADFPSNNVMV 100
T V WT+ +S + ++G +EA F++MR P + V++L+ D +
Sbjct: 186 TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 101 ST--------------ALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFE 144
++ +L MYAK G++ A ++FD M+ + W A+++G+ K Y
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
EA++ F M V PD ++I S ++ CA V +L M+ YV + D++D+V + + L+
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 205 DVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEV 264
D++++ G +E AR VF R R +V W+++IVG+ ++G EA+ + M++G ++V
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 265 SFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
+F G L AC+H+G++ +G +F+ M ++++PQ +H+ C+
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACV 465
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%), Gaps = 21/265 (7%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP------------- 94
W + I + R+ +A L ++ M+L +P TF LL C+
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 95 ----SNNVMVSTALLDMYAKFGRMDLATVVFDVM----RGCDFWTALLNGFVKRDYFEEA 146
+V V L+ +YAK R+ A VF+ + R WTA+++ + + EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
LE F M+ V+PD++ ++SVLN ++ L G +H V K + + +L +
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM 266
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y++ G + A+ +F +M L+ WN++I G+A NG+ EA++ F+ M + D +S
Sbjct: 267 YAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISI 326
Query: 267 TGALTACSHAGLIEDGLQYFDIMKK 291
T A++AC+ G +E ++ + +
Sbjct: 327 TSAISACAQVGSLEQARSMYEYVGR 351
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 107/203 (52%), Gaps = 7/203 (3%)
Query: 102 TALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVE 159
T L+ + FG + A VFD + W A++ G+ + ++F++AL + MQ++ V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 160 PDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQV 219
PD T +L C+ + L +G ++H V + F +V V N L+ +Y++ + AR V
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTV 176
Query: 220 FQ--RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAG 277
F+ + +RT+VSW +I+ +A NG EALE F+ M+K K D V+ L A +
Sbjct: 177 FEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT--- 233
Query: 278 LIEDGLQYFDIMKKIYRVSPQIE 300
++D Q I + ++ +IE
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIE 256
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 132/216 (61%), Gaps = 8/216 (3%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQ 154
+V V+ L+ +Y G +DLA VFD M R W ++++ V+ ++ AL+ FR MQ
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 155 ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQ---DFKDNVRVCNTLMDVYSRFG 211
S EPD T+ SVL+ CA + +L +G W H ++ ++ D +V V N+L+++Y + G
Sbjct: 245 RS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 212 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLM--QKGVFKTDEVSFTGA 269
+ A QVFQ M KR L SWN++I+GFA +G EA+ +F+ M ++ + + V+F G
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 270 LTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
L AC+H G + G QYFD+M + Y + P +EH+GCI
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI 399
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 26/260 (10%)
Query: 29 PQISIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLS 88
P I ++ S ST Q S++ C L+ FT Y P+
Sbjct: 31 PHIPPASSPSASTAGNHHQRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPA--------- 81
Query: 89 GCADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGF---VKRDYF 143
+ + +L + + F ++ A VFD + W L+ V R
Sbjct: 82 --------TLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRK-- 131
Query: 144 EEALEYFRVMQISG-VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNT 202
EEA +R M G PD T VL CA + G +H + K F +V V N
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 203 LMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTD 262
L+ +Y GC++ AR+VF M +R+LVSWNS+I G AL+ F MQ+ F+ D
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPD 250
Query: 263 EVSFTGALTACSHAGLIEDG 282
+ L+AC+ G + G
Sbjct: 251 GYTMQSVLSACAGLGSLSLG 270
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 153/317 (48%), Gaps = 57/317 (17%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V W S I+ ++G +EA F M P +T +++S CA +
Sbjct: 219 VSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGR 278
Query: 96 --------NNVMVSTALLDMYAKFGRMDLATVVFDVM----------------------- 124
N++++S A +DMYAK R+ A +FD M
Sbjct: 279 VVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 125 ----------RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCAN 174
R W AL+ G+ + EEAL F +++ V P + + ++L CA+
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 175 VRTLGIGLWMHRYVPKQDFK------DNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTL 228
+ L +G+ H +V K FK D++ V N+L+D+Y + GC+E VF++M +R
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 229 VSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDI 288
VSWN++I+GFA NG+ EALE F M + K D ++ G L+AC HAG +E+G YF
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 289 MKKIYRVSPQIEHHGCI 305
M + + V+P +H+ C+
Sbjct: 519 MTRDFGVAPLRDHYTCM 535
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 103/194 (53%), Gaps = 2/194 (1%)
Query: 93 FPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYF 150
P N+ +++ K G +D A +F M D W ++++GF + D EEAL YF
Sbjct: 81 MPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYF 140
Query: 151 RVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRF 210
+M G + + SVL+ C+ + + G+ +H + K F +V + + L+D+YS+
Sbjct: 141 AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC 200
Query: 211 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
G + A++VF M R +VSWNS+I F NG EAL+ F +M + + DEV+ +
Sbjct: 201 GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 271 TACSHAGLIEDGLQ 284
+AC+ I+ G +
Sbjct: 261 SACASLSAIKVGQE 274
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 51/288 (17%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNN---------- 97
W S +S + EA F M G + +F ++LS C+ N
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 98 -------VMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALE 148
V + +AL+DMY+K G ++ A VFD M R W +L+ F + EAL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 149 YFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQD-FKDNVRVCNTLMDVY 207
F++M S VEPD +T+ SV++ CA++ + +G +H V K D ++++ + N +D+Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 208 SRFGCIEFARQVFQ-------------------------------RMHKRTLVSWNSIIV 236
++ I+ AR +F +M +R +VSWN++I
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 237 GFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQ 284
G+ NG EAL F L+++ SF L AC+ + G+Q
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQ 407
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP----------- 94
V W + I+ + ++G EA F ++ P+H +F +L CAD
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 95 ------------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKR 140
+++ V +L+DMY K G ++ +VF M R C W A++ GF +
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 141 DYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLW----MHRYVPKQDFKDN 196
Y EALE FR M SG +PD++T+I VL+ C + + G M R +D+
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 197 VRVCNTLMDVYSRFGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVN 241
++D+ R G +E A+ + + M + V W S++ V+
Sbjct: 532 Y---TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 32/156 (20%)
Query: 168 VLNVCANVRTLGIGL-WMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKR 226
+L+ C + I + ++H V K F + + + N L+D YS+ G +E RQVF +M +R
Sbjct: 25 LLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQR 84
Query: 227 TLVSWNSIIVGFAVNGFVG-------------------------------EALEYFNLMQ 255
+ +WNS++ G GF+ EAL YF +M
Sbjct: 85 NIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMH 144
Query: 256 KGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKK 291
K F +E SF L+ACS + G+Q ++ K
Sbjct: 145 KEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 161 bits (407), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 135/218 (61%), Gaps = 6/218 (2%)
Query: 93 FPSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYF 150
P +++ STA++ YAK G ++ A +FD M R W +++G+ + + +AL F
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLF 246
Query: 151 RVMQISG-VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSR 209
+ + G +PD +T+++ L+ C+ + L G W+H +V + NV+VC L+D+YS+
Sbjct: 247 QKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSK 306
Query: 210 FGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQ--KGVFKTDEVSFT 267
G +E A VF ++ +V+WN++I G+A++G+ +AL FN MQ G+ TD ++F
Sbjct: 307 CGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTD-ITFI 365
Query: 268 GALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
G L AC+HAGL+ +G++ F+ M + Y + P+IEH+GC+
Sbjct: 366 GTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCL 403
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 38/209 (18%)
Query: 108 YAKFGRMDLATVVFDVMRGCDFW--TALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTI 165
YA G++ + +F D + TA +N ++A + + S + P+ T
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 166 ISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHK 225
S+L C+ G +H +V K + V L+DVY++ G + A++VF RM +
Sbjct: 134 SSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPE 189
Query: 226 RTL-------------------------------VSWNSIIVGFAVNGFVGEALEYF-NL 253
R+L VSWN +I G+A +GF +AL F L
Sbjct: 190 RSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKL 249
Query: 254 MQKGVFKTDEVSFTGALTACSHAGLIEDG 282
+ +G K DE++ AL+ACS G +E G
Sbjct: 250 LAEGKPKPDEITVVAALSACSQIGALETG 278
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 95 SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRV 152
+ +V+ T+++ Y + G + LA FD M R WT +++G+++ F E+LE FR
Sbjct: 299 ARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFRE 358
Query: 153 MQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGC 212
MQ +G+ PD T++SVL CA++ +L IG W+ Y+ K K++V V N L+D+Y + GC
Sbjct: 359 MQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGC 418
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
E A++VF M +R +W +++VG A NG EA++ F MQ + D++++ G L+A
Sbjct: 419 SEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSA 478
Query: 273 CSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
C+H+G+++ ++F M+ +R+ P + H+GC+
Sbjct: 479 CNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCM 511
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 55/290 (18%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSG---------CAD---- 92
V W + I + C E + M G P TF LL+G C
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 93 -----FPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD----FWTALLNGFVKRDYF 143
+N+ V AL+ MY+ G MD+A VFD R C W +++G+ + +
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFD--RRCKEDVFSWNLMISGYNRMKEY 217
Query: 144 EEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL 203
EE++E M+ + V P +T++ VL+ C+ V+ + +H YV + + ++R+ N L
Sbjct: 218 EESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENAL 277
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFA------------------------ 239
++ Y+ G ++ A ++F+ M R ++SW SI+ G+
Sbjct: 278 VNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWT 337
Query: 240 --VNGFV-----GEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
++G++ E+LE F MQ DE + LTAC+H G +E G
Sbjct: 338 IMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG 387
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 34/217 (15%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
+ WT I + R+GC E+ F M+ G P T V++L+ CA S
Sbjct: 334 ISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTY 393
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEA 146
N+V+V AL+DMY K G + A VF M D WTA++ G +EA
Sbjct: 394 IDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEA 453
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL--- 203
++ F MQ ++PD +T + VL+ C + G+ ++ K + + R+ +L
Sbjct: 454 IKVFFQMQDMSIQPDDITYLGVLSACNHS---GMVDQARKFFAK--MRSDHRIEPSLVHY 508
Query: 204 ---MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVG 237
+D+ R G ++ A ++ ++M ++ NSI+ G
Sbjct: 509 GCMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWG 541
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 16/126 (12%)
Query: 143 FEEALEYFRVMQIS----GVEPDYLTIISVLNVCANV---RTLGIGLWMHRYVPKQDFKD 195
F L F+ + +S + DY IS+L VC + L P F+
Sbjct: 11 FNSELSIFKALLMSTITESISNDYSRFISILGVCKTTDQFKQLHSQSITRGVAPNPTFQK 70
Query: 196 NVRV--CNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE-YFN 252
+ V C+ L G + +A ++F ++ + +V WN++I G++ GE + Y N
Sbjct: 71 KLFVFWCSRLG------GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 253 LMQKGV 258
++++GV
Sbjct: 125 MLKEGV 130
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 141/258 (54%), Gaps = 20/258 (7%)
Query: 68 FTRMRLYGTNPSHITFVTLLSGCADFPSNNV-----------------MVSTALLDMYAK 110
+ RM +PS+ TF +++ CAD + + V AL+ Y+K
Sbjct: 95 YRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSK 154
Query: 111 FGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISV 168
G M+ A VFD M + W +L++GF + +EA++ F M+ SG EPD T +S+
Sbjct: 155 CGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSL 214
Query: 169 LNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTL 228
L+ CA + +G W+H+Y+ + NV++ L+++YSR G + AR+VF +M + +
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 229 VSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKT-DEVSFTGALTACSHAGLIEDGLQYFD 287
+W ++I + +G+ +A+E FN M+ + V+F L+AC+HAGL+E+G +
Sbjct: 275 AAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYK 334
Query: 288 IMKKIYRVSPQIEHHGCI 305
M K YR+ P +EHH C+
Sbjct: 335 RMTKSYRLIPGVEHHVCM 352
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 20/167 (11%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSN------- 96
+ V W S +S ++G EA F +MR G P TFV+LLS CA +
Sbjct: 172 SIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVH 231
Query: 97 ----------NVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFE 144
NV + TAL+++Y++ G + A VFD M+ + WTA+++ + Y +
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQ 291
Query: 145 EALEYFRVMQIS-GVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPK 190
+A+E F M+ G P+ +T ++VL+ CA+ + G +++ + K
Sbjct: 292 QAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 158 bits (400), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 133/252 (52%), Gaps = 24/252 (9%)
Query: 56 CRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALLDMYAKFGRMD 115
C+ GC+ +A F MR NV T+++ Y GR+D
Sbjct: 193 CKCGCLDKARAVFDSMR----------------------DKNVKCWTSMVFGYVSTGRID 230
Query: 116 LATVVFD--VMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCA 173
A V+F+ ++ WTA++NG+V+ + F+EALE FR MQ +G+ PD ++S+L CA
Sbjct: 231 EARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCA 290
Query: 174 NVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNS 233
L G W+H Y+ + + V L+D+Y++ GCIE A +VF + +R SW S
Sbjct: 291 QTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTS 350
Query: 234 IIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIY 293
+I G A+NG G AL+ + M+ + D ++F LTAC+H G + +G + F M + +
Sbjct: 351 LIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 294 RVSPQIEHHGCI 305
V P+ EH C+
Sbjct: 411 NVQPKSEHCSCL 422
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 35/217 (16%)
Query: 100 VSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVM-QIS 156
VS +L+ MYA G++++ VFD M R W L++ +V FE+A+ F+ M Q S
Sbjct: 83 VSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQES 142
Query: 157 GVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFA 216
++ D TI+S L+ C+ ++ L IG ++R+V + F+ +VR+ N L+D++ + GC++ A
Sbjct: 143 NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKA 201
Query: 217 RQVFQRMHKRTLVSWNSIIVGFA--------------------------VNGFV-----G 245
R VF M + + W S++ G+ +NG+V
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 246 EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
EALE F MQ + D LT C+ G +E G
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 8/167 (4%)
Query: 129 FWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV 188
+ +L F + L F ++ G+ PD T+ VL +R + G +H Y
Sbjct: 13 MYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 189 PKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 248
K + + V N+LM +Y+ G IE +VF M +R +VSWN +I + NG +A+
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAI 132
Query: 249 EYFNLM-QKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYR 294
F M Q+ K DE + L+ACS L+ +I ++IYR
Sbjct: 133 GVFKRMSQESNLKFDEGTIVSTLSACS-------ALKNLEIGERIYR 172
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 39 KSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD------ 92
+S + V WT+ ++ + + EA F M+ G P + V+LL+GCA
Sbjct: 238 RSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQ 297
Query: 93 -------FPSNNV----MVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVK 139
N V +V TAL+DMYAK G ++ A VF ++ D WT+L+ G
Sbjct: 298 GKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAM 357
Query: 140 RDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWM-HRYVPKQDFKDNVR 198
AL+ + M+ GV D +T ++VL C + + G + H + + +
Sbjct: 358 NGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSE 417
Query: 199 VCNTLMDVYSRFGCIEFARQVFQRMHKRT 227
C+ L+D+ R G ++ A ++ +M +
Sbjct: 418 HCSCLIDLLCRAGLLDEAEELIDKMRGES 446
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 157 bits (397), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 148/282 (52%), Gaps = 20/282 (7%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD---------FP 94
T V W S + G +A + M P TF+ L + C +
Sbjct: 220 TVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIH 279
Query: 95 SNNVMVST--------ALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFE 144
S+ + + T + MY+K A ++FD+M R C WT +++G+ ++ +
Sbjct: 280 SHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMD 339
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFK-DNVRVCNTL 203
EAL F M SG +PD +T++S+++ C +L G W+ K DNV +CN L
Sbjct: 340 EALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDE 263
+D+YS+ G I AR +F ++T+V+W ++I G+A+NG EAL+ F+ M +K +
Sbjct: 400 IDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNH 459
Query: 264 VSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
++F L AC+H+G +E G +YF IMK++Y +SP ++H+ C+
Sbjct: 460 ITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 21/264 (7%)
Query: 40 STIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---- 95
S + + W I +E+ L F M+ G P++ TF + CA
Sbjct: 12 SGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCC 71
Query: 96 -------------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKR 140
++V V TA +DM+ K +D A VF+ M R W A+L+GF +
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 141 DYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVC 200
+ ++A FR M+++ + PD +T+++++ + ++L + MH + V V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 201 NTLMDVYSRFGCIEFARQVFQRMHK--RTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGV 258
NT + Y + G ++ A+ VF+ + + RT+VSWNS+ ++V G +A + LM +
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 259 FKTDEVSFTGALTACSHAGLIEDG 282
FK D +F +C + + G
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQG 275
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTA 103
T V WT+ I+ + +G LEA F++M P+HITF+ +L CA S +
Sbjct: 423 TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAH--------SGS 474
Query: 104 LLDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYL 163
L + F M V+++ G D ++ +++ ++ EEALE R M +PD
Sbjct: 475 LEKGWEYFHIM---KQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMS---AKPDAG 528
Query: 164 TIISVLNVCANVRTLGIG 181
++LN C R + I
Sbjct: 529 IWGALLNACKIHRNVKIA 546
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLY-GTNPSHITFVTLLSGCADFP--------- 94
+ WT+ IS + + I + ALE + L P+ T+ ++L C
Sbjct: 127 VISWTTMISAYSKCK-IHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGI 185
Query: 95 -----SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEAL 147
++V V +AL+D++AK G + A VFD M D W +++ GF + + AL
Sbjct: 186 IKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVAL 245
Query: 148 EYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVY 207
E F+ M+ +G + T+ SVL C + L +G+ H ++ K D ++ + N L+D+Y
Sbjct: 246 ELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMY 303
Query: 208 SRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFT 267
+ G +E A +VF +M +R +++W+++I G A NG+ EAL+ F M+ K + ++
Sbjct: 304 CKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIV 363
Query: 268 GALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
G L ACSHAGL+EDG YF MKK+Y + P EH+GC+
Sbjct: 364 GVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401
Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 11/186 (5%)
Query: 104 LLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
L++MY KF ++ A +FD M R WT +++ + K ++ALE +M V P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 162 YLTIISVLNVC---ANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQ 218
T SVL C ++VR L G + K+ + +V V + L+DV+++ G E A
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCG------IIKEGLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 219 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGL 278
VF M + WNSII GFA N ALE F M++ F ++ + T L AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 279 IEDGLQ 284
+E G+Q
Sbjct: 276 LELGMQ 281
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 81/165 (49%), Gaps = 11/165 (6%)
Query: 131 TALLNGFVKRDY---FEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRY 187
T LL+ F + Y A++ +Q G+ D T ++ C + R + G + R+
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 188 VPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 247
+ + + + N L+++Y +F + A Q+F +M +R ++SW ++I ++ +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 248 LEYFNLMQKGVFKTDEVSFTGALTACS--------HAGLIEDGLQ 284
LE LM + + + +++ L +C+ H G+I++GL+
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE 191
>sp|Q9LS72|PP261_ARATH Pentatricopeptide repeat-containing protein At3g29230
OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1
Length = 600
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 151/280 (53%), Gaps = 25/280 (8%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSH--ITFVTLLSGCA----------- 91
TV W S + ++G + +A RL+ P I++ T+L G A
Sbjct: 185 TVSWNSMLGGLVKAGELRDAR------RLFDEMPQRDLISWNTMLDGYARCREMSKAFEL 238
Query: 92 --DFPSNNVMVSTALLDMYAKFGRMDLATVVFDVM----RGCDFWTALLNGFVKRDYFEE 145
P N + + ++ Y+K G M++A V+FD M + WT ++ G+ ++ +E
Sbjct: 239 FEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKE 298
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
A M SG++ D +IS+L C L +G+ +H + + + N V N L+D
Sbjct: 299 ADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLD 358
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+Y++ G ++ A VF + K+ LVSWN+++ G V+G EA+E F+ M++ + D+V+
Sbjct: 359 MYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F L +C+HAGLI++G+ YF M+K+Y + PQ+EH+GC+
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
+A F MQ G+ D T +L C+ L + MH ++ K ++ V N L+
Sbjct: 100 QAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALI 159
Query: 205 DVYSRFG--CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTD 262
D YSR G + A ++F++M +R VSWNS++ G G + +A F+ M + D
Sbjct: 160 DCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRD 215
Query: 263 EVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVS 296
+S+ L + + + F+ M + VS
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTVS 249
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 145/280 (51%), Gaps = 20/280 (7%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP----------- 94
V WT+ I R+G EA + F M+ G + +T V++L
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 95 -------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEE 145
+V + ++L+DMY K D A VFD M R WTAL+ G+V+ F++
Sbjct: 230 YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK 289
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
+ F M S V P+ T+ SVL+ CA+V L G +H Y+ K + N TL+D
Sbjct: 290 GMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLID 349
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+Y + GC+E A VF+R+H++ + +W ++I GFA +G+ +A + F M +EV+
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F L+AC+H GL+E+G + F MK + + P+ +H+ C+
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 129 FWTALLNGFVKRDYFEEALEY--FRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHR 186
W +L+ F L + +R M+ +GV P T +L +R H
Sbjct: 69 LWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHA 127
Query: 187 YVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 246
++ K + V N+L+ YS G +FA ++F + +V+W ++I GF NG E
Sbjct: 128 HIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASE 187
Query: 247 ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIED 281
A+ YF M+K +E++ L A AG +ED
Sbjct: 188 AMVYFVEMKKTGVAANEMTVVSVLKA---AGKVED 219
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQ 154
+V+ +++ +AK G +D A +FD M R W ++++GFV+ F++AL+ FR MQ
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 155 ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIE 214
V+PD T++S+LN CA + G W+H Y+ + F+ N V L+D+Y + GCIE
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 215 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACS 274
VF+ K+ L WNS+I+G A NGF A++ F+ +++ + D VSF G LTAC+
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 275 HAGLIEDGLQYFDIMKKIYRVSPQIEHH 302
H+G + ++F +MK+ Y + P I+H+
Sbjct: 371 HSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 24/268 (8%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSN--------- 96
V W S IS R+G +A F M+ P T V+LL+ CA ++
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 97 --------NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEA 146
N +V TAL+DMY K G ++ VF+ + W +++ G + E A
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV-PKQDFKDNVRVCNTLMD 205
++ F ++ SG+EPD ++ I VL CA+ + R + K + +++ +++
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 206 VYSRFGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEV 264
V G +E A + + M + V W+S++ G V A ++K DE
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKK--LDPDET 461
Query: 265 SFTGALT-ACSHAGLIEDGLQYFDIMKK 291
L+ A + GL E+ ++ +MK+
Sbjct: 462 CGYVLLSNAYASYGLFEEAVEQRLLMKE 489
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 8/201 (3%)
Query: 95 SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYFRV 152
S+ V S L A M+ A +VF + + W ++ GF + + E A+ F
Sbjct: 55 SDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFID 114
Query: 153 MQISG--VEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRF 210
M S V+P LT SV + G +H V K+ +D+ + NT++ +Y
Sbjct: 115 MLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTC 174
Query: 211 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
GC+ A ++F M +V+WNS+I+GFA G + +A F+ M + + VS+ +
Sbjct: 175 GCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP----QRNGVSWNSMI 230
Query: 271 TACSHAGLIEDGLQYFDIMKK 291
+ G +D L F M++
Sbjct: 231 SGFVRNGRFKDALDMFREMQE 251
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 154 bits (390), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 19/279 (6%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V W S I + ++ EA L F +M G P+ ++ + L CAD
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKL 362
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEA 146
NV V +L+ MY K +D A +F + R W A++ GF + +A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
L YF M+ V+PD T +SV+ A + W+H V + NV V L+D+
Sbjct: 423 LNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDM 482
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y++ G I AR +F M +R + +WN++I G+ +GF ALE F MQKG K + V+F
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 267 TGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
++ACSH+GL+E GL+ F +MK+ Y + ++H+G +
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 62 LEAALEF-TRMRLYGTNPSHITFVTLLSGCADFP-----------------SNNVMVSTA 103
L+ AL+F RMR P F LL C D S ++ T
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 104 LLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
L +MYAK +++ A VFD M D W ++ G+ + ALE + M ++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 162 YLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQ 221
++TI+SVL + +R + +G +H Y + F V + L+D+Y++ G +E ARQ+F
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295
Query: 222 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIED 281
M +R +VSWNS+I + N EA+ F M K +VS GAL AC+ G +E
Sbjct: 296 GMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLER 355
Query: 282 G 282
G
Sbjct: 356 G 356
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 102 TALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVE 159
T L+ ++ ++G +D A VF+ + + + +L GF K ++AL++F M+ VE
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 160 PDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQV 219
P +L VC + L +G +H + K F ++ L ++Y++ + AR+V
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 220 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLI 279
F RM +R LVSWN+I+ G++ NG ALE M + K ++ L A S LI
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 280 EDG 282
G
Sbjct: 253 SVG 255
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP--------- 94
T V W + I ++G ++A F++MR P T+V++++ A+
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 95 --------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFE 144
NV V+TAL+DMYAK G + +A ++FD+M R W A+++G+ + +
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCN--T 202
ALE F MQ ++P+ +T +SV++ C++ + GL Y+ K+++ + + +
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF-YMMKENYSIELSMDHYGA 580
Query: 203 LMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVG 237
++D+ R G + A +M + V+ ++G
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 46/89 (51%)
Query: 203 LMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTD 262
L+ ++ R+G ++ A +VF+ + + V +++++ GFA + +AL++F M+ +
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPV 134
Query: 263 EVSFTGALTACSHAGLIEDGLQYFDIMKK 291
+FT L C + G + ++ K
Sbjct: 135 VYNFTYLLKVCGDEAELRVGKEIHGLLVK 163
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 154 bits (389), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 142/265 (53%), Gaps = 22/265 (8%)
Query: 63 EAALEFTRMRLYGTNPSHITFVTLLSGCAD------------------FPSNNVMVSTAL 104
EA + F M G NPS ITF T++ C F S + +L
Sbjct: 612 EAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISL 671
Query: 105 LDMYAKFGRMDLATVVFDVM---RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
L MY M A +F + + WT +++G + ++EEAL++++ M+ GV PD
Sbjct: 672 LGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPD 731
Query: 162 YLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQ 221
T ++VL VC+ + +L G +H + + NTL+D+Y++ G ++ + QVF
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFD 791
Query: 222 RMHKRT-LVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIE 280
M +R+ +VSWNS+I G+A NG+ +AL+ F+ M++ DE++F G LTACSHAG +
Sbjct: 792 EMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVS 851
Query: 281 DGLQYFDIMKKIYRVSPQIEHHGCI 305
DG + F++M Y + +++H C+
Sbjct: 852 DGRKIFEMMIGQYGIEARVDHVACM 876
Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 125/249 (50%), Gaps = 20/249 (8%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTAL 104
TV WT S + ++G EA L F RMR G P H+ FVT++
Sbjct: 226 TVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----------------- 268
Query: 105 LDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPDY 162
+ Y + G++ A ++F M D W +++G KR A+EYF M+ S V+
Sbjct: 269 -NTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTR 327
Query: 163 LTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQR 222
T+ SVL+ V L +GL +H K N+ V ++L+ +YS+ +E A +VF+
Sbjct: 328 STLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA 387
Query: 223 MHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
+ ++ V WN++I G+A NG + +E F M+ + D+ +FT L+ C+ + +E G
Sbjct: 388 LEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 283 LQYFDIMKK 291
Q+ I+ K
Sbjct: 448 SQFHSIIIK 456
Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 117/258 (45%), Gaps = 19/258 (7%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP----------- 94
V W IS H + GC A F MR + T ++LS
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 95 ------SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEA 146
++N+ V ++L+ MY+K +M+ A VF+ + + FW A++ G+ +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
+E F M+ SG D T S+L+ CA L +G H + K+ N+ V N L+D+
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDM 472
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y++ G +E ARQ+F+RM R V+WN+II + + EA + F M +D
Sbjct: 473 YAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACL 532
Query: 267 TGALTACSHAGLIEDGLQ 284
L AC+H + G Q
Sbjct: 533 ASTLKACTHVHGLYQGKQ 550
Score = 98.2 bits (243), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 123/261 (47%), Gaps = 24/261 (9%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA---------DFPS- 95
V W + I + +G + F M+ G N TF +LLS CA F S
Sbjct: 394 VFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSI 453
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD----FWTALLNGFVKRDYFE 144
N+ V AL+DMYAK G ++ A +F+ M CD W ++ +V+ +
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM--CDRDNVTWNTIIGSYVQDENES 511
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
EA + F+ M + G+ D + S L C +V L G +H K ++ ++L+
Sbjct: 512 EAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLI 571
Query: 205 DVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEV 264
D+YS+ G I+ AR+VF + + ++VS N++I G++ N + + ++ +GV E+
Sbjct: 572 DMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGV-NPSEI 630
Query: 265 SFTGALTACSHAGLIEDGLQY 285
+F + AC + G Q+
Sbjct: 631 TFATIVEACHKPESLTLGTQF 651
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 22/225 (9%)
Query: 40 STIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---- 95
S+ + V WT +S H ++G EA + MR G P TFVT+L C+ S
Sbjct: 692 SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG 751
Query: 96 -------------NNVMVSTALLDMYAKFGRMDLATVVFDVMR---GCDFWTALLNGFVK 139
+ + S L+DMYAK G M ++ VFD MR W +L+NG+ K
Sbjct: 752 RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAK 811
Query: 140 RDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQ-DFKDNVR 198
Y E+AL+ F M+ S + PD +T + VL C++ + G + + Q + V
Sbjct: 812 NGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVD 871
Query: 199 VCNTLMDVYSRFGCIEFARQVFQRMH-KRTLVSWNSIIVGFAVNG 242
++D+ R+G ++ A + + K W+S++ ++G
Sbjct: 872 HVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHG 916
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 107/261 (40%), Gaps = 28/261 (10%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V W + I + + EA F RM L G + L C
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDFWT-----ALLNGFVKRDYF 143
++ ++L+DMY+K G + A VF + W+ AL+ G+ + +
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE---WSVVSMNALIAGYSQNN-L 610
Query: 144 EEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCN-T 202
EEA+ F+ M GV P +T +++ C +L +G H + K+ F +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 203 LMDVYSRFGCIEFARQVFQRMHK-RTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKT 261
L+ +Y + A +F + +++V W ++ G + NGF EAL+++ M+
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 262 DEVSFTGALTACSHAGLIEDG 282
D+ +F L CS + +G
Sbjct: 731 DQATFVTVLRVCSVLSSLREG 751
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 83/191 (43%), Gaps = 1/191 (0%)
Query: 100 VSTALLDMYAKFGRMDLATVVFDVM-RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGV 158
+ A++D+YAK ++ A FD + + W ++L+ + + L F + + +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 159 EPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQ 218
P+ T VL+ CA + G +H + K + N L+D+Y++ I AR+
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 219 VFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGL 278
VF+ + V W + G+ G EA+ F M+ + D ++F + G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 279 IEDGLQYFDIM 289
++D F M
Sbjct: 277 LKDARLLFGEM 287
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 198 RVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF-NLMQK 256
R+ N ++D+Y++ + +A + F + K + +WNS++ ++ G G+ L F +L +
Sbjct: 96 RLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFEN 154
Query: 257 GVFKTDEVSFTGALTACSHAGLIEDGLQ 284
+F ++ +F+ L+ C+ +E G Q
Sbjct: 155 QIF-PNKFTFSIVLSTCARETNVEFGRQ 181
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 147/279 (52%), Gaps = 26/279 (9%)
Query: 48 WTSSISRHCRSGCILEA-ALEFTRMRLYGTNPSHITFVTLLSGCADFP------------ 94
WT+ +S ++ EA L + R G P TF T+L+ C +
Sbjct: 232 WTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKL 291
Query: 95 -----SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEAL 147
+NV+V ++LLDMY K G + A VF+ M + W+ALL G+ + E+A+
Sbjct: 292 ITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAI 351
Query: 148 EYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMH-RYVPKQDFKDNVRVCNTLMDV 206
E FR M+ E D +VL CA + + +G +H +YV + F NV V + L+D+
Sbjct: 352 EIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCF-GNVIVESALIDL 406
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y + GCI+ A +V+ +M R +++WN+++ A NG EA+ +FN M K K D +SF
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISF 466
Query: 267 TGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
LTAC H G++++G YF +M K Y + P EH+ C+
Sbjct: 467 IAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM 505
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 4/189 (2%)
Query: 100 VSTALLDMYAKFG-RMDLATVVFD--VMRGCDFWTALLNGFVKRDYFEEALEYFRVMQIS 156
V +LL +Y K G M VFD ++ WT++++G+V +ALE F M
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 157 GVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFA 216
G++ + T+ S + C+ + + +G H V F+ N + +TL +Y A
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDA 217
Query: 217 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGV-FKTDEVSFTGALTACSH 275
R+VF M + ++ W +++ F+ N EAL F M +G D +F LTAC +
Sbjct: 218 RRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGN 277
Query: 276 AGLIEDGLQ 284
++ G +
Sbjct: 278 LRRLKQGKE 286
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 38 SKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNN 97
SK +I + W + +S ++G EA F M G P +I+F+ +L+ C
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH----- 475
Query: 98 VMVSTALLDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEA 146
T ++D + L + + G + ++ +++ + FEEA
Sbjct: 476 ----TGMVDEGRNY--FVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEA 518
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 153 bits (387), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/237 (33%), Positives = 139/237 (58%), Gaps = 5/237 (2%)
Query: 71 MRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF- 129
M +YG + + + + P + + +T +++ Y++ G + A +F ++ D
Sbjct: 165 MEIYGKSGELVNAKKMFD---EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTV 221
Query: 130 -WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV 188
WTA+++G V+ +ALE FR MQ+ V + T + VL+ C+++ L +G W+H +V
Sbjct: 222 CWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFV 281
Query: 189 PKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 248
Q + + V N L+++YSR G I AR+VF+ M + ++S+N++I G A++G EA+
Sbjct: 282 ENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAI 341
Query: 249 EYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F M F+ ++V+ L ACSH GL++ GL+ F+ MK+++ V PQIEH+GCI
Sbjct: 342 NEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 87/200 (43%), Gaps = 10/200 (5%)
Query: 93 FPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYF 150
F + V L+ + + +D A VF + + +TA+++GFV + + +
Sbjct: 56 FHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLY 115
Query: 151 RVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRF 210
M + V PD I SVL C L + +H V K F + V +M++Y +
Sbjct: 116 HRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKS 171
Query: 211 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
G + A+++F M R V+ +I ++ GF+ EALE F + V D V +T +
Sbjct: 172 GELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF----QDVKIKDTVCWTAMI 227
Query: 271 TACSHAGLIEDGLQYFDIMK 290
+ L+ F M+
Sbjct: 228 DGLVRNKEMNKALELFREMQ 247
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 164 TIISVLNVCANVRTL-GIGLWMHRYVPKQD---FKDNVRVCNTLMDVYSRFGCIEFARQV 219
T+ISVL C N+ + I + R QD + +RVC+TL +++A V
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTL-------DSVDYAYDV 83
Query: 220 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
F + + + ++I GF +G + + ++ M D T L AC
Sbjct: 84 FSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 131/212 (61%), Gaps = 2/212 (0%)
Query: 96 NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVM 153
++V + ++L+DMYAK R++ + VF + R W +L+ G+V+ + EAL FR M
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 154 QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCI 213
+ V+P + SV+ CA++ TL +G +H YV + F N+ + + L+D+YS+ G I
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 214 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
+ AR++F RM+ VSW +II+G A++G EA+ F M++ K ++V+F LTAC
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 274 SHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
SH GL+++ YF+ M K+Y ++ ++EH+ +
Sbjct: 455 SHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 123/295 (41%), Gaps = 57/295 (19%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA-----DFPSN---- 96
+ W S I +A F MR G P H F ++L C F +
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGF 130
Query: 97 --------NVMVSTALLDMYAK-------------------------------------F 111
++ AL++MYAK F
Sbjct: 131 IVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPF 190
Query: 112 GRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVL 169
G +D VF+VM D + ++ G+ + +E+AL R M + ++PD T+ SVL
Sbjct: 191 G-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 170 NVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLV 229
+ + + G +H YV ++ +V + ++L+D+Y++ IE + +VF R++ R +
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 230 SWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQ 284
SWNS++ G+ NG EAL F M K V+F+ + AC+H + G Q
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 47/198 (23%)
Query: 130 WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVP 189
W +++ F + F +AL F M+ SG PD+ SVL C + L G +H ++
Sbjct: 73 WKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIV 132
Query: 190 KQDFKDNVRVCNTLMDVYSR-------------------------------------FGC 212
+ ++ N LM++Y++ FG
Sbjct: 133 RLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFG- 191
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
I+ R+VF+ M ++ +VS+N+II G+A +G +AL M K D + + L
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 273 CSHAGLIEDGLQYFDIMK 290
S +Y D++K
Sbjct: 252 FS---------EYVDVIK 260
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 152 bits (384), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 132/216 (61%), Gaps = 4/216 (1%)
Query: 93 FPSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYF 150
P + + +++ Y K G+MD+A +F M + WT +++G+V+ D +EAL+ F
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 151 RVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFK-DNVRVCNTLMDVYSR 209
MQ S VEPD +++ + L+ CA + L G W+H Y+ K + D+V C L+D+Y++
Sbjct: 236 HEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAK 294
Query: 210 FGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGA 269
G +E A +VF+ + K+++ +W ++I G+A +G EA+ F MQK K + ++FT
Sbjct: 295 CGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAV 354
Query: 270 LTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
LTACS+ GL+E+G F M++ Y + P IEH+GCI
Sbjct: 355 LTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 88/199 (44%), Gaps = 33/199 (16%)
Query: 117 ATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCAN 174
A +VFD D W ++ GF D E +L ++ M S + T S+L C+N
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 175 VRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSI 234
+ +H + K ++++V N+L++ Y+ G + A +F R+ + VSWNS+
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 235 IVGFA--------------------------VNGFV-----GEALEYFNLMQKGVFKTDE 263
I G+ ++G+V EAL+ F+ MQ + D
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 264 VSFTGALTACSHAGLIEDG 282
VS AL+AC+ G +E G
Sbjct: 248 VSLANALSACAQLGALEQG 266
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 23/213 (10%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS--------- 95
+ WT+ IS + ++ EA F M+ P +++ LS CA +
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 96 --------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEE 145
+ ++ L+DMYAK G M+ A VF + + WTAL++G+ + E
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGRE 331
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDF--KDNVRVCNTL 203
A+ F MQ G++P+ +T +VL C+ + G + Y ++D+ K + +
Sbjct: 332 AISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIF-YSMERDYNLKPTIEHYGCI 390
Query: 204 MDVYSRFGCIEFARQVFQRMH-KRTLVSWNSII 235
+D+ R G ++ A++ Q M K V W +++
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 148/283 (52%), Gaps = 24/283 (8%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTL---LSGCADFPSN------ 96
V W++ I + + I EA F +M L N + +T V + L GCA F
Sbjct: 272 VTWSAMIGGYVENEMIKEAGEVFFQM-LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 97 -----------NVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYF 143
++ V ++ YAK+G + A F + D + +L+ G V
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 144 EEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL 203
EE+ F M+ SG+ PD T++ VL C+++ LG G H Y + N +CN L
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDE 263
MD+Y++ G ++ A++VF MHKR +VSWN+++ GF ++G EAL FN MQ+ DE
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 264 VSFTGALTACSHAGLIEDGLQYFDIMKK-IYRVSPQIEHHGCI 305
V+ L+ACSH+GL+++G Q F+ M + + V P+I+H+ C+
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 90 CADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEAL 147
C+DF + ++ V TAL+D YAK G +++A VFD M D W A+++GF + +
Sbjct: 131 CSDF-ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVI 189
Query: 148 EYFRVMQ-ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
F M+ I G+ P+ TI+ + L G +H Y + F +++ V ++DV
Sbjct: 190 GLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDV 249
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF--NLMQKGVFKTDEV 264
Y++ CI +AR+VF K+ V+W+++I G+ N + EA E F L+ V V
Sbjct: 250 YAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPV 309
Query: 265 SFTGALTACSHAGLIEDG 282
+ L C+ G + G
Sbjct: 310 AIGLILMGCARFGDLSGG 327
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 7/202 (3%)
Query: 86 LLSGCADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF----WTALLNGFVKRD 141
LL S+ V+V+ L +YA ++LA VFD + W ++ + D
Sbjct: 25 LLKRSLTLSSSTVLVN--LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASND 82
Query: 142 YFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCN 201
+ E+AL+ + M SGV P T VL CA +R + G +H +V DF ++ VC
Sbjct: 83 FAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCT 142
Query: 202 TLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQK-GVFK 260
L+D Y++ G +E A +VF M KR +V+WN++I GF+++ + + + F M++
Sbjct: 143 ALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLS 202
Query: 261 TDEVSFTGALTACSHAGLIEDG 282
+ + G A AG + +G
Sbjct: 203 PNLSTIVGMFPALGRAGALREG 224
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 147/281 (52%), Gaps = 21/281 (7%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V WT+ ISR+ ++G EA F M P+ TF T+L+ C
Sbjct: 119 VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGL 178
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEA 146
+++ V ++LLDMYAK G++ A +F+ + D TA++ G+ + EEA
Sbjct: 179 IVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
LE F + G+ P+Y+T S+L + + L G H +V +++ + N+L+D+
Sbjct: 239 LEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDM 298
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQ-KGVFKTDEVS 265
YS+ G + +AR++F M +RT +SWN+++VG++ +G E LE F LM+ + K D V+
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 266 FTGALTACSHAGLIEDGLQYFDIM-KKIYRVSPQIEHHGCI 305
L+ CSH + + GL FD M Y P EH+GCI
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 129/273 (47%), Gaps = 26/273 (9%)
Query: 33 IQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD 92
I + S S + +Q IS+ C +G + EA LE M + G + LL+ C D
Sbjct: 8 IHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLE---MAMLGPEMGFHGYDALLNACLD 64
Query: 93 -------------------FPSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWT 131
P+ + T LL Y K ++ A V D M + WT
Sbjct: 65 KRALRDGQRVHAHMIKTRYLPA--TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWT 122
Query: 132 ALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQ 191
A+++ + + + EAL F M S +P+ T +VL C LG+G +H + K
Sbjct: 123 AMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKW 182
Query: 192 DFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYF 251
++ ++ V ++L+D+Y++ G I+ AR++F+ + +R +VS +II G+A G EALE F
Sbjct: 183 NYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 252 NLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQ 284
+ + + V++ LTA S L++ G Q
Sbjct: 243 HRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%)
Query: 153 MQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGC 212
M + G E + ++LN C + R L G +H ++ K + + L+ Y + C
Sbjct: 43 MAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 102
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
+E AR+V M ++ +VSW ++I ++ G EAL F M + K +E +F LT+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 273 CSHAGLIEDGLQYFDIMKK 291
C A + G Q ++ K
Sbjct: 163 CIRASGLGLGKQIHGLIVK 181
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 151 bits (381), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 149/280 (53%), Gaps = 19/280 (6%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLS---GCADFP------S 95
TV W S IS + +SG ++EA F M + HIT++ L+S AD S
Sbjct: 373 TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Query: 96 NNVM--------VSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEE 145
N + VS AL+DMYAK G + + +F M D W +++ V+ F
Sbjct: 433 NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFAT 492
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
L+ M+ S V PD T + L +CA++ +G +H + + ++ +++ N L++
Sbjct: 493 GLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIE 552
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+YS+ GC+E + +VF+RM +R +V+W +I + + G +ALE F M+K D V
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
F + ACSH+GL+++GL F+ MK Y++ P IEH+ C+
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACV 652
Score = 101 bits (252), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 9/206 (4%)
Query: 80 HITFVTLLSGCADFPSNNVMVSTALLDMYAKFGRMDLATVVF---DVMRGCDFWTALLNG 136
H ++L +DF S L+D Y+ F + VF + W +++
Sbjct: 27 HALVISLGLDSSDF------FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRA 80
Query: 137 FVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDN 196
F K F EALE++ ++ S V PD T SV+ CA + +G ++ + F+ +
Sbjct: 81 FSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESD 140
Query: 197 VRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQK 256
+ V N L+D+YSR G + ARQVF M R LVSWNS+I G++ +G+ EALE ++ ++
Sbjct: 141 LFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKN 200
Query: 257 GVFKTDEVSFTGALTACSHAGLIEDG 282
D + + L A + +++ G
Sbjct: 201 SWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 24/270 (8%)
Query: 27 KRPQISIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTL 86
+ P S+ S W S I ++G EA + ++R +P TF ++
Sbjct: 53 REPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSV 112
Query: 87 LSGCADFP-----------------SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF 129
+ CA +++ V AL+DMY++ G + A VFD M D
Sbjct: 113 IKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDL 172
Query: 130 --WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRY 187
W +L++G+ Y+EEALE + ++ S + PD T+ SVL N+ + G +H +
Sbjct: 173 VSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Query: 188 VPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEA 247
K V V N L+ +Y +F AR+VF M R VS+N++I G+ V E+
Sbjct: 233 ALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEES 292
Query: 248 LEYF--NLMQKGVFKTDEVSFTGALTACSH 275
+ F NL Q FK D ++ + L AC H
Sbjct: 293 VRMFLENLDQ---FKPDLLTVSSVLRACGH 319
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 91/165 (55%), Gaps = 3/165 (1%)
Query: 104 LLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
L+ MY KF R A VFD M R + ++ G++K + EE++ F + + +PD
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPD 306
Query: 162 YLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQ 221
LT+ SVL C ++R L + +++ Y+ K F V N L+DVY++ G + AR VF
Sbjct: 307 LLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFN 366
Query: 222 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
M + VSWNSII G+ +G + EA++ F +M + D +++
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITY 411
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVMQ 154
+++ ++D Y + G A ++FD MR W +++G+ +F++A+E FR M+
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 155 ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIE 214
+ P+Y+T++SVL + + +L +G W+H Y + + + + L+D+YS+ G IE
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 215 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACS 274
A VF+R+ + +++W+++I GFA++G G+A++ F M++ + +V++ LTACS
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 275 HAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
H GL+E+G +YF M + + P+IEH+GC+
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCM 417
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 50/219 (22%)
Query: 114 MDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALE---YFRVMQISGVEPDYLTIISV 168
+D A +F+ M R C W ++ GF + D + + ++ +M VEP+ T SV
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 169 LNVCANVRTLGIGLWMHRYVPKQDF--------------------KD------------- 195
L CA + G +H K F KD
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 196 ------------NVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 243
+ + N ++D Y R G + AR +F +M +R++VSWN++I G+++NGF
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 244 VGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
+A+E F M+KG + + V+ L A S G +E G
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 108/270 (40%), Gaps = 62/270 (22%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNV----- 98
+ V W + IS + +G +A F M+ P+++T V++L + S +
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLH 297
Query: 99 ------------MVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFE 144
++ +AL+DMY+K G ++ A VF+ + W+A++NGF
Sbjct: 298 LYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAG 357
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
+A++ F M+ +GV P + I++L C
Sbjct: 358 DAIDCFCKMRQAGVRPSDVAYINLLTAC-------------------------------- 385
Query: 205 DVYSRFGCIEFARQVFQRM-----HKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVF 259
S G +E R+ F +M + + + ++ +G + EA E+ M
Sbjct: 386 ---SHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMP---I 439
Query: 260 KTDEVSFTGALTACSHAGLIEDGLQYFDIM 289
K D+V + L AC G +E G + +I+
Sbjct: 440 KPDDVIWKALLGACRMQGNVEMGKRVANIL 469
>sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350
OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1
Length = 538
Score = 150 bits (378), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 137/255 (53%), Gaps = 8/255 (3%)
Query: 57 RSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALLDMYAKFGRMDL 116
+SG L ++ + Y ++ SHIT L + NV+ TA+L YA+ G +
Sbjct: 154 KSGFHLYVVVQTALLHSYASSVSHITLARQLFD--EMSERNVVSWTAMLSGYARSGDISN 211
Query: 117 ATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVM-QISGVEPDYLTIISVLNVCA 173
A +F+ M R W A+L + F EA+ FR M + P+ +T++ VL+ CA
Sbjct: 212 AVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACA 271
Query: 174 NVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNS 233
TL + +H + ++D +V V N+L+D+Y + G +E A VF+ K++L +WNS
Sbjct: 272 QTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNS 331
Query: 234 IIVGFAVNGFVGEALEYFNLMQK---GVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMK 290
+I FA++G EA+ F M K K D ++F G L AC+H GL+ G YFD+M
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMT 391
Query: 291 KIYRVSPQIEHHGCI 305
+ + P+IEH+GC+
Sbjct: 392 NRFGIEPRIEHYGCL 406
Score = 38.1 bits (87), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 48 WTSSI---SRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTAL 104
W S I + H RS + E ++ + P HITF+ LL+ C ++ +VS
Sbjct: 329 WNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC----THGGLVSKGR 384
Query: 105 LDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLT 164
G DL T F + + + L++ + F+EALE M++ E +
Sbjct: 385 -------GYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIW-- 435
Query: 165 IISVLNVC 172
S+LN C
Sbjct: 436 -GSLLNAC 442
>sp|Q9FG85|PP415_ARATH Pentatricopeptide repeat-containing protein At5g43790
OS=Arabidopsis thaliana GN=PCMP-E30 PE=2 SV=1
Length = 460
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 127/212 (59%), Gaps = 10/212 (4%)
Query: 100 VSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKR---DYFEEALEYFRVMQ 154
V AL+ YA G++ A +F+ +R D W LL + D EE L F MQ
Sbjct: 152 VQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ 211
Query: 155 ISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIE 214
V P+ L++++++ CAN+ G+W H YV K + N V +L+D+YS+ GC+
Sbjct: 212 ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLS 268
Query: 215 FARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALE-YFNLMQKGVFKTDEVSFTGALTAC 273
FAR+VF M +R + +N++I G AV+GF E +E Y +L+ +G+ D +F ++AC
Sbjct: 269 FARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVP-DSATFVVTISAC 327
Query: 274 SHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
SH+GL+++GLQ F+ MK +Y + P++EH+GC+
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 63 EAALEFTRMRLYGTNPSHITFVTLLSGCADFPS-------------NNV----MVSTALL 105
E L F RM++ P+ ++ V L+ CA+ NN+ V T+L+
Sbjct: 202 EVLLLFMRMQV---RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLI 258
Query: 106 DMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYL 163
D+Y+K G + A VFD M R + A++ G + +E +E ++ + G+ PD
Sbjct: 259 DLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSA 318
Query: 164 TIISVLNVCANVRTLGIGLWMHRYVPK-QDFKDNVRVCNTLMDVYSRFGCIEFARQVFQR 222
T + ++ C++ + GL + + + V L+D+ R G +E A + ++
Sbjct: 319 TFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKK 378
Query: 223 MH-KRTLVSWNSIIVGFAVNG 242
M K W S + +G
Sbjct: 379 MPVKPNATLWRSFLGSSQTHG 399
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 136/264 (51%), Gaps = 22/264 (8%)
Query: 63 EAALEF-TRMRLYGTNPSHITFVTLLSGCADFPS-----------------NNVMVSTAL 104
+ AL+F T MR N ++T V +L+ C+ NV+V+ AL
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 105 LDMYAKFGRMDLATVVFDVM---RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
LDMY K G + A + F M R W ALL G + E+AL +F MQ+ +P
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPS 495
Query: 162 YLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQ 221
T+ ++L CAN+ L +G +H ++ + +K +V + ++D+YS+ C ++A +VF+
Sbjct: 496 KYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFK 555
Query: 222 RMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIED 281
R L+ WNSII G NG E E F L++ K D V+F G L AC G +E
Sbjct: 556 EAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVEL 615
Query: 282 GLQYFDIMKKIYRVSPQIEHHGCI 305
G QYF M Y +SPQ+EH+ C+
Sbjct: 616 GFQYFSSMSTKYHISPQVEHYDCM 639
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 63/303 (20%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNV----- 98
+ V W + R+ G EA + F +M P + T +++ C+ + V
Sbjct: 227 SDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIH 286
Query: 99 ------------MVSTALLDMYAKFGRMDLATVVFDVMRGCDF----------------- 129
+VST++ DMY K R++ A VFD R D
Sbjct: 287 AIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTR 346
Query: 130 ----------------WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCA 173
W A+L G+V ++EAL++ +M+ D +T++ +LNVC+
Sbjct: 347 EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCS 406
Query: 174 NVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHK-RTLVSWN 232
+ + +G H ++ + + NV V N L+D+Y + G ++ A F++M + R VSWN
Sbjct: 407 GISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWN 466
Query: 233 SIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACS-----------HAGLIED 281
+++ G A G +AL +F MQ K + + L C+ H LI D
Sbjct: 467 ALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD 525
Query: 282 GLQ 284
G +
Sbjct: 526 GYK 528
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 23/263 (8%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA---DFP---------- 94
W + I+ ++G E F RM G + +F +L C D
Sbjct: 130 WNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVV 189
Query: 95 ----SNNVMVSTALLDMYAKFGRMDLATVVFD-VMRGCDF-WTALLNGFVKRDYFEEALE 148
S NV + T+++D+Y K M A VFD ++ D W ++ +++ + +EA+
Sbjct: 190 KYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVV 249
Query: 149 YFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYS 208
F M V P T+ SV+ C+ L +G +H K + V ++ D+Y
Sbjct: 250 MFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 209 RFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTG 268
+ +E AR+VF + + L SW S + G+A++G EA E F+LM + + VS+
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMP----ERNIVSWNA 365
Query: 269 ALTACSHAGLIEDGLQYFDIMKK 291
L HA ++ L + +M++
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQ 388
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 201 NTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFK 260
N ++ Y + GC++ AR++F+ M +R SWN++I A NG E F M + +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 261 TDEVSFTGALTACSHAGLIED 281
E SF G L +C GLI D
Sbjct: 160 ATETSFAGVLKSC---GLILD 177
Score = 31.6 bits (70), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 32 SIQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGC 90
+I+ +T D + W S I CR+G E F + G P H+TF+ +L C
Sbjct: 550 AIEVFKEAATRDL-ILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQAC 607
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 141/281 (50%), Gaps = 19/281 (6%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGC---ADFPS----- 95
+ V WT+ S + SG EA F +M G P V +LS C D S
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 96 ---------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFE 144
N V T L+++YAK G+M+ A VFD M D W+ ++ G+ + +
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
E +E F M ++PD +I+ L+ CA++ L +G W + + +F N+ + N L+
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 205 DVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEV 264
D+Y++ G + +VF+ M ++ +V N+ I G A NG V + F +K D
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 265 SFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
+F G L C HAGLI+DGL++F+ + +Y + +EH+GC+
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCM 456
Score = 118 bits (296), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 121/234 (51%), Gaps = 19/234 (8%)
Query: 68 FTRMRLYGTNPSHITFVTLLSGCADFPS-----------------NNVMVSTALLDMYAK 110
F +R +G TF +L C S ++V T+LL +Y+
Sbjct: 99 FLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSG 158
Query: 111 FGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISV 168
GR++ A +FD + R WTAL +G+ EA++ F+ M GV+PD I+ V
Sbjct: 159 SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQV 218
Query: 169 LNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTL 228
L+ C +V L G W+ +Y+ + + + N V TL+++Y++ G +E AR VF M ++ +
Sbjct: 219 LSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDI 278
Query: 229 VSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG 282
V+W+++I G+A N F E +E F M + K D+ S G L++C+ G ++ G
Sbjct: 279 VTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLG 332
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
Query: 129 FWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV 188
+ +L+NGFV F E L+ F ++ G+ T VL C + +G+ +H V
Sbjct: 78 LYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLV 137
Query: 189 PKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 248
K F +V +L+ +YS G + A ++F + R++V+W ++ G+ +G EA+
Sbjct: 138 VKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAI 197
Query: 249 EYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDG---LQYFDIMK 290
+ F M + K D L+AC H G ++ G ++Y + M+
Sbjct: 198 DLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 148/296 (50%), Gaps = 38/296 (12%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP---------- 94
V W + I+ H ++G E F M P TF ++L C
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSS 507
Query: 95 ------SNNVMVSTALLDMYAKFGRMDLATVVFD----------------------VMRG 126
++N V +L+DMY+K G ++ A + +
Sbjct: 508 IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEM 567
Query: 127 CDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHR 186
C W ++++G+V ++ E+A F M G+ PD T +VL+ CAN+ + G+G +H
Sbjct: 568 CVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHA 627
Query: 187 YVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 246
V K++ + +V +C+TL+D+YS+ G + +R +F++ +R V+WN++I G+A +G E
Sbjct: 628 QVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 247 ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHH 302
A++ F M K + V+F L AC+H GLI+ GL+YF +MK+ Y + PQ+ H+
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHY 743
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 118/255 (46%), Gaps = 23/255 (9%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTR-MRLYGTNPSHITFVTLLSGCA------------ 91
+V W++ I+ C +L AL+F + M+ S + ++L CA
Sbjct: 246 SVSWSAIIA-GCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 92 ------DFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYF 143
DF ++ + V TA LDMYAK M A ++FD + + A++ G+ + ++
Sbjct: 305 AHALKSDFAADGI-VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHG 363
Query: 144 EEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL 203
+AL F + SG+ D +++ V CA V+ L GL ++ K +V V N
Sbjct: 364 FKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA 423
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDE 263
+D+Y + + A +VF M +R VSWN+II NG E L F M + + DE
Sbjct: 424 IDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 264 VSFTGALTACSHAGL 278
+F L AC+ L
Sbjct: 484 FTFGSILKACTGGSL 498
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 19/269 (7%)
Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSN----- 96
+ V W S +S + ++G L++ F M G TF +L C+
Sbjct: 142 VRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQ 201
Query: 97 ------------NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDY 142
+V+ ++ALLDMYAK R + VF + + W+A++ G V+ +
Sbjct: 202 IHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 261
Query: 143 FEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNT 202
AL++F+ MQ SVL CA + L +G +H + K DF + V
Sbjct: 262 LSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTA 321
Query: 203 LMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTD 262
+D+Y++ ++ A+ +F S+N++I G++ +AL F+ + D
Sbjct: 322 TLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFD 381
Query: 263 EVSFTGALTACSHAGLIEDGLQYFDIMKK 291
E+S +G AC+ + +GLQ + + K
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIK 410
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 107/212 (50%), Gaps = 22/212 (10%)
Query: 33 IQTNNSKSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD 92
++ ++K + V W S IS + +A + FTRM G P T+ T+L CA+
Sbjct: 556 LEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615
Query: 93 FPS-----------------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTAL 133
S ++V + + L+DMY+K G + + ++F+ DF W A+
Sbjct: 616 LASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAM 675
Query: 134 LNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDF 193
+ G+ EEA++ F M + ++P+++T IS+L CA++ + GL + Y+ K+D+
Sbjct: 676 ICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGL-EYFYMMKRDY 734
Query: 194 KDNVRV--CNTLMDVYSRFGCIEFARQVFQRM 223
+ ++ + ++D+ + G ++ A ++ + M
Sbjct: 735 GLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 92/183 (50%), Gaps = 2/183 (1%)
Query: 94 PSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFR 151
P +V+ +++ Y+K M A F++M R W ++L+G+++ +++E F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 152 VMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFG 211
M G+E D T +L VC+ + +G+ +H V + +V + L+D+Y++
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGK 229
Query: 212 CIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALT 271
+ +VFQ + ++ VSW++II G N + AL++F MQK + + L
Sbjct: 230 RFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLR 289
Query: 272 ACS 274
+C+
Sbjct: 290 SCA 292
Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 168 VLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRT 227
V CA L +G H ++ F+ V N L+ VY+ A VF +M R
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 228 LVSWNSIIVGFAVNGFVGEALEYFNLM 254
+VSWN +I G++ + + +A +FN+M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMM 140
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 4/140 (2%)
Query: 153 MQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGC 212
M ISG P + +L V N R + +P +D V N +++ YS+
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD----VVSWNKMINGYSKSND 129
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
+ A F M R +VSWNS++ G+ NG +++E F M + + D +F L
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 273 CSHAGLIEDGLQYFDIMKKI 292
CS G+Q I+ ++
Sbjct: 190 CSFLEDTSLGMQIHGIVVRV 209
>sp|Q9FNN7|PP371_ARATH Pentatricopeptide repeat-containing protein At5g08510
OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1
Length = 511
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Query: 92 DFPSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEY 149
+ +V V A++ Y + G M A +FD M + WT +++GF + + EAL+
Sbjct: 142 EMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKM 201
Query: 150 FRVMQI-SGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYS 208
F M+ V+P+++T++SVL CAN+ L IG + Y + F DN+ VCN +++YS
Sbjct: 202 FLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYS 261
Query: 209 RFGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFT 267
+ G I+ A+++F+ + ++R L SWNS+I A +G EAL F M + K D V+F
Sbjct: 262 KCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFV 321
Query: 268 GALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
G L AC H G++ G + F M++++++SP++EH+GC+
Sbjct: 322 GLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 54/254 (21%)
Query: 48 WTSSISRHCRSGCILEAALEFTRM-RLYGTNPSHITFVTLLSGCADFPS----------- 95
WT+ IS ++G EA F M + P+HIT V++L CA+
Sbjct: 182 WTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYA 241
Query: 96 ------NNVMVSTALLDMYAKFGRMDLATVVFDVM---RGCDFWTALLNGFVKRDYFEEA 146
+N+ V A ++MY+K G +D+A +F+ + R W +++ +EA
Sbjct: 242 RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEA 301
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
L F M G +PD +T + +L C + + V Q+ ++ + +
Sbjct: 302 LTLFAQMLREGEKPDAVTFVGLLLACVHGGMV---------VKGQELFKSMEEVHKISPK 352
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
+GC+ + G VG+ E ++L++ K D V +
Sbjct: 353 LEHYGCM------------------------IDLLGRVGKLQEAYDLIKTMPMKPDAVVW 388
Query: 267 TGALTACSHAGLIE 280
L ACS G +E
Sbjct: 389 GTLLGACSFHGNVE 402
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 127 CDF-WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLT---IISVLNVCANVRTLGIGL 182
C F + L+ + E++ + ++ G+ P + T I + ++ R L +
Sbjct: 46 CTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRL-- 103
Query: 183 WMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNG 242
+H + F+ + C TL+ Y++ G + AR+VF M KR + WN++I G+ G
Sbjct: 104 -LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRG 162
Query: 243 FVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSP 297
+ A+E F+ M + + S+T ++ S G + L+ F M+K V P
Sbjct: 163 DMKAAMELFDSMP----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKP 213
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 140/275 (50%), Gaps = 24/275 (8%)
Query: 49 TSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALLDM- 107
T+ I + GC+ A F M P+ + + +++ C F N+V + + D
Sbjct: 145 TTLIGMYGGCGCVEFARKVFDEMH----QPNLVAWNAVITAC--FRGNDVAGAREIFDKM 198
Query: 108 --------------YAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYFR 151
Y K G ++ A +F M D W+ ++ G F E+ YFR
Sbjct: 199 LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFR 258
Query: 152 VMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFG 211
+Q +G+ P+ +++ VL+ C+ + G +H +V K + V V N L+D+YSR G
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 212 CIEFARQVFQRMH-KRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
+ AR VF+ M KR +VSW S+I G A++G EA+ FN M D +SF L
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 271 TACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
ACSHAGLIE+G YF MK++Y + P+IEH+GC+
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Score = 71.2 bits (173), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 130 WTALLNGFVKRDYFEEALEYFRVMQISG-VEPDYLTIISVLNVCANVRTLGIGLWMHRYV 188
+ L+ G+ + D ++ F M G V PD + V+ N R+L G MH
Sbjct: 73 FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQA 132
Query: 189 PKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 248
K + ++ V TL+ +Y GC+EFAR+VF MH+ LV+WN++I V A
Sbjct: 133 LKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAR 192
Query: 249 EYF-----------NLMQKGVFKT----------------DEVSFTGALTACSHAGLIED 281
E F N+M G K D+VS++ + +H G +
Sbjct: 193 EIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNE 252
Query: 282 GLQYFDIMKK 291
YF +++
Sbjct: 253 SFLYFRELQR 262
Score = 35.8 bits (81), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 23/46 (50%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA 91
V WTS I+ G EA F M YG P I+F++LL C+
Sbjct: 337 VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS 382
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 149/291 (51%), Gaps = 31/291 (10%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCAD------------- 92
V W+++IS + + G EA +M G P+ +T +++LSGCA
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 93 ---FP--------SNNVMVSTALLDMYAKFGRMDLATVVFDVM----RGCDFWTALLNGF 137
+P + MV L+DMYAK ++D A +FD + R WT ++ G+
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 138 VKRDYFEEALEYFRVM--QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPK-QDFK 194
+ +ALE M + P+ TI L CA++ L IG +H Y + Q
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 195 DNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLM 254
+ V N L+D+Y++ G I AR VF M + V+W S++ G+ ++G+ EAL F+ M
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 255 QKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
++ FK D V+ L ACSH+G+I+ G++YF+ MK ++ VSP EH+ C+
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACL 621
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 47 QWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS----------- 95
W S I + +GC + F M P + TF + C + S
Sbjct: 94 HWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALS 153
Query: 96 ------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEAL 147
+NV V AL+ MY++ + A VFD M D W +++ + K + AL
Sbjct: 154 LVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVAL 213
Query: 148 EYF-RVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDV 206
E F R+ G PD +T+++VL CA++ T +G +H + + N+ V N L+D+
Sbjct: 214 EMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDM 273
Query: 207 YSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSF 266
Y++ G ++ A VF M + +VSWN+++ G++ G +A+ F MQ+ K D V++
Sbjct: 274 YAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTW 333
Query: 267 TGALTACSHAGLIEDGL 283
+ A++ + GL + L
Sbjct: 334 SAAISGYAQRGLGYEAL 350
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 1/160 (0%)
Query: 126 GCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMH 185
G W +L+ + + L F +M PD T V C + ++ G H
Sbjct: 91 GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAH 150
Query: 186 RYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVG 245
F NV V N L+ +YSR + AR+VF M +VSWNSII +A G
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 246 EALEYFNLMQKGV-FKTDEVSFTGALTACSHAGLIEDGLQ 284
ALE F+ M + D ++ L C+ G G Q
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQ 250
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 149 bits (375), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 2/203 (0%)
Query: 102 TALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALEYFRVMQISGVE 159
T ++ YA+ G +D++ +FD M D W A++ G V+ ++AL F+ MQ S +
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTK 386
Query: 160 PDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQV 219
PD +T+I L+ C+ + L +G+W+HRY+ K NV + +L+D+Y++ G I A V
Sbjct: 387 PDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV 446
Query: 220 FQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLI 279
F + R +++ +II G A++G A+ YFN M DE++F G L+AC H G+I
Sbjct: 447 FHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMI 506
Query: 280 EDGLQYFDIMKKIYRVSPQIEHH 302
+ G YF MK + ++PQ++H+
Sbjct: 507 QTGRDYFSQMKSRFNLNPQLKHY 529
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 53/289 (18%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYG---TNPSHITFVTLLSGCADFPSNNV------ 98
W +I S E+ L + +M +G + P H T+ L CAD +++
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 99 -----------MVSTALLDMYAKFGRMDLATVVFD--VMRGCDFWTALLNGFVKRDYFEE 145
V A + M+A G M+ A VFD +R W L+NG+ K E+
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
A+ +++M+ GV+PD +T+I +++ C+ + L G + YV + + + + N LMD
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMD 300
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAV----------------------NGF 243
++S+ G I AR++F + KRT+VSW ++I G+A N
Sbjct: 301 MFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAM 360
Query: 244 VG---------EALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGL 283
+G +AL F MQ K DE++ L+ACS G ++ G+
Sbjct: 361 IGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Query: 130 WTALLNGFVKRDYFEEALEYFRVMQISGV---EPDYLTIISVLNVCANVRTLGIGLWMHR 186
W + GF + + +E+ ++ M G PD+ T + VCA++R +G +
Sbjct: 121 WNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILG 180
Query: 187 YVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGE 246
+V K + V N + +++ G +E AR+VF R LVSWN +I G+ G +
Sbjct: 181 HVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEK 240
Query: 247 ALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKK 291
A+ + LM+ K D+V+ G +++CS G + G ++++ +K+
Sbjct: 241 AIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFP----------- 94
V W + I ++ +A F M+ T P IT + LS C+
Sbjct: 355 VLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRY 414
Query: 95 ------SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEA 146
S NV + T+L+DMYAK G + A VF + R +TA++ G A
Sbjct: 415 IEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTA 474
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGL-WMHRYVPKQDFKDNVRVCNTLMD 205
+ YF M +G+ PD +T I +L+ C + + G + + + + ++ + ++D
Sbjct: 475 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 534
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVS-WNSIIVGFAVNGFV 244
+ R G +E A ++ + M + W +++ G ++G V
Sbjct: 535 LLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNV 574
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 148 bits (374), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 95 SNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRV 152
S++V + T L+DMYA+FG +D A+ VF M R W+A++ + K EAL FR
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 153 M--QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRF 210
M + P+ +T++SVL CA++ L G +H Y+ ++ + V + L+ +Y R
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 211 GCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGAL 270
G +E ++VF RMH R +VSWNS+I + V+G+ +A++ F M V+F L
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVL 393
Query: 271 TACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
ACSH GL+E+G + F+ M + + + PQIEH+ C+
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 122/283 (43%), Gaps = 31/283 (10%)
Query: 27 KRPQISIQTNNSK--STIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFV 84
K P S+ NN S + I C+ G + +A R+ ++PS T+
Sbjct: 26 KPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQA----IRVLSQESSPSQQTYE 81
Query: 85 TLLSGCADFPS-----------------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGC 127
L+ C S + ++T L+ MY+ G +D A VFD R
Sbjct: 82 LLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKR 141
Query: 128 DF--WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCA----NVRTLGIG 181
W AL + EE L + M GVE D T VL C V L G
Sbjct: 142 TIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG 201
Query: 182 LWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVN 241
+H ++ ++ + +V + TL+D+Y+RFGC+++A VF M R +VSW+++I +A N
Sbjct: 202 KEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 242 GFVGEALEYFNLMQKGVFKT--DEVSFTGALTACSHAGLIEDG 282
G EAL F M + + + V+ L AC+ +E G
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG 304
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 148 bits (373), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 151/281 (53%), Gaps = 24/281 (8%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLS-----GCADFPSN---- 96
V WT I+ R+G EA F++M + P+ T+V +L GC
Sbjct: 173 VSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGL 229
Query: 97 --------NVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEA 146
++ AL+DMY K ++ A VF + D W ++++G V + +EA
Sbjct: 230 ILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEA 289
Query: 147 LEYFRVMQIS-GVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
++ F +MQ S G++PD + SVL+ CA++ + G W+H Y+ K + + ++D
Sbjct: 290 IDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVD 349
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+Y++ G IE A ++F + + + +WN+++ G A++G E+L YF M K FK + V+
Sbjct: 350 MYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVT 409
Query: 266 FTGALTACSHAGLIEDGLQYFDIMK-KIYRVSPQIEHHGCI 305
F AL AC H GL+++G +YF MK + Y + P++EH+GC+
Sbjct: 410 FLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 17/172 (9%)
Query: 84 VTLLSGCADFPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYF 143
VT L ADF S + ++ ++ + + F + LL+ + D
Sbjct: 45 VTFLGKSADFASYSSVILHSIRSVLSSFS-----------------YNTLLSSYAVCDKP 87
Query: 144 EEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTL 203
+ ++ +G PD T V C + G +H V K F D++ V N+L
Sbjct: 88 RVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSL 147
Query: 204 MDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQ 255
+ Y G A +VF M R +VSW II GF G EAL+ F+ M
Sbjct: 148 VHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
>sp|Q3ECB8|PP128_ARATH Pentatricopeptide repeat-containing protein At1g77170
OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1
Length = 467
Score = 147 bits (372), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 121/209 (57%), Gaps = 4/209 (1%)
Query: 101 STALLDMYAKFGRMDLATVVFD--VMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGV 158
+ + +Y K G + A VFD R W A++ G EA+E F M+ SG+
Sbjct: 155 ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGL 214
Query: 159 EPDYLTIISVLNVCANVRTLGIGLWMHRYV--PKQDFKDNVRVCNTLMDVYSRFGCIEFA 216
EPD T++SV C + L + +H+ V K + K ++ + N+L+D+Y + G ++ A
Sbjct: 215 EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 217 RQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHA 276
+F+ M +R +VSW+S+IVG+A NG EALE F M++ + ++++F G L+AC H
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 277 GLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
GL+E+G YF +MK + + P + H+GCI
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCI 363
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADF-------------- 93
W + I +G EA F M+ G P T V++ + C
Sbjct: 186 WNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVL 245
Query: 94 -----PSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEA 146
+++M+ +L+DMY K GRMDLA+ +F+ MR + W++++ G+ EA
Sbjct: 246 QAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQ-DFKDNVRVCNTLMD 205
LE FR M+ GV P+ +T + VL+ C + + G + + + + + ++D
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVD 365
Query: 206 VYSRFGCIEFARQVFQRM-HKRTLVSWNSIIVG 237
+ SR G ++ A++V + M K ++ W ++ G
Sbjct: 366 LLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 129 FWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV 188
W ++ +++ + +A++ + M S V PD ++ V+ + +G +H
Sbjct: 84 LWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVA 143
Query: 189 PKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEAL 248
+ F + + + +Y + G E AR+VF +R L SWN+II G G EA+
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 249 EYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQ 284
E F M++ + D+ + +C G + Q
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQ 239
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 82/184 (44%), Gaps = 17/184 (9%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALL 105
V W+S I + +G LEA F +MR +G P+ ITFV +LS C V L+
Sbjct: 287 VSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC---------VHGGLV 337
Query: 106 DMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTI 165
+ + M + F++ G + +++ + +EA +V++ ++P+ +
Sbjct: 338 EEGKTYFAMMKSE--FELEPGLSHYGCIVDLLSRDGQLKEAK---KVVEEMPMKPNVMVW 392
Query: 166 ISVLNVCANVRTLGIGLWMHRY-VPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMH 224
++ C + + W+ Y V + + D V V L +VY+ G + +V + M
Sbjct: 393 GCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYV--VLANVYALRGMWKDVERVRKLMK 450
Query: 225 KRTL 228
+ +
Sbjct: 451 TKKV 454
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 147 bits (371), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVM----RGCDFWTALLNGFVKRDYFEEALEYFRV 152
+V V ALL Y K G MD A + ++M R WT +++G+ K EA+E F+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 153 MQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGC 212
M + VEPD +T+++VL+ CA++ +L +G + YV + V + N ++D+Y++ G
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTA 272
I A VF+ +++R +V+W +II G A +G EAL FN M K + ++V+F L+A
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSA 360
Query: 273 CSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
CSH G ++ G + F+ M+ Y + P IEH+GC+
Sbjct: 361 CSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 21/221 (9%)
Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS------ 95
+ V WT IS + +SG EA F RM + P +T + +LS CAD S
Sbjct: 212 VRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGER 271
Query: 96 -----------NNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDY 142
V ++ A++DMYAK G + A VF+ + R WT ++ G +
Sbjct: 272 ICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGH 331
Query: 143 FEEALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYV-PKQDFKDNVRVCN 201
EAL F M +GV P+ +T I++L+ C++V + +G + + K N+
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 202 TLMDVYSRFGCIEFARQVFQRM-HKRTLVSWNSIIVGFAVN 241
++D+ R G + A +V + M K W S++ V+
Sbjct: 392 CMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVH 432
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 143/279 (51%), Gaps = 21/279 (7%)
Query: 48 WTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITF---VTLLSGCADFPSNNVM----- 99
W + + R+ E+ L + +MR G P T+ V +S DF +
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVV 136
Query: 100 ---------VSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALE 148
V+T L+ MY KFG + A +F+ M+ D W A L V+ ALE
Sbjct: 137 KYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALE 196
Query: 149 YFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYS 208
YF M V+ D T++S+L+ C + +L IG ++ K++ N+ V N +D++
Sbjct: 197 YFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHL 256
Query: 209 RFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTG 268
+ G E AR +F+ M +R +VSW+++IVG+A+NG EAL F MQ + + V+F G
Sbjct: 257 KCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLG 316
Query: 269 ALTACSHAGLIEDGLQYFDIM--KKIYRVSPQIEHHGCI 305
L+ACSHAGL+ +G +YF +M + P+ EH+ C+
Sbjct: 317 VLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACM 355
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%)
Query: 184 MHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGF 243
+H V + F + + L++ G + +ARQVF MHK + WN++ G+ N
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 244 VGEALEYFNLMQKGVFKTDEVSFTGALTACSHAG 277
E+L + M+ + DE ++ + A S G
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLG 123
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/191 (18%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVSTALL 105
V W++ I + +G EA FT M+ G P+++TF+ +LS C+ L+
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACS---------HAGLV 327
Query: 106 DMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTI 165
+ ++ + + + ++ + + +++ + EEA E+ + M VEPD
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP---VEPDTGIW 384
Query: 166 ISVLNVCANVRTLGIGLWMHRYVPKQ--DFKDNVRVCNTLMDVYSRFGCIEFARQVFQRM 223
++L CA R + +G + + + D + + + ++ C++ R +++
Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 224 HKRTLVSWNSI 234
+ + +++S+
Sbjct: 445 GTKKVAAYSSV 455
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 51/311 (16%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPS---------- 95
V W S I+ + G +A F +M SH+T V +LS CA +
Sbjct: 198 VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSY 257
Query: 96 -------NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFE-- 144
N+ ++ A+LDMY K G ++ A +FD M D WT +L+G+ + +E
Sbjct: 258 IEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAA 317
Query: 145 -----------------------------EALEYFRVMQI-SGVEPDYLTIISVLNVCAN 174
EAL F +Q+ ++ + +T++S L+ CA
Sbjct: 318 REVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQ 377
Query: 175 VRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSI 234
V L +G W+H Y+ K + N V + L+ +YS+ G +E +R+VF + KR + W+++
Sbjct: 378 VGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 235 IVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYR 294
I G A++G EA++ F MQ+ K + V+FT ACSH GL+++ F M+ Y
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 295 VSPQIEHHGCI 305
+ P+ +H+ CI
Sbjct: 498 IVPEEKHYACI 508
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 34/230 (14%)
Query: 96 NNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEALEYFRVM 153
++V V+ +L+ Y G +D A VF ++ D W +++NGFV++ ++ALE F+ M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 154 QISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCI 213
+ V+ ++T++ VL+ CA +R L G + Y+ + N+ + N ++D+Y++ G I
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 214 -------------------------------EFARQVFQRMHKRTLVSWNSIIVGFAVNG 242
E AR+V M ++ +V+WN++I + NG
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 243 FVGEALEYFNLMQ-KGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKK 291
EAL F+ +Q + K ++++ L+AC+ G +E G +KK
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 109 AKFGRMDLATVVFD-VMRGCDF-WTALLNGFVK-RDYFEEALEYFRVMQISGVEPDYLTI 165
+ F ++ A VFD + + F W L+ + D + ++ S P+ T
Sbjct: 75 SSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTF 134
Query: 166 ISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHK 225
++ A V +L +G +H K +V V N+L+ Y G ++ A +VF + +
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE 194
Query: 226 RTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQ 284
+ +VSWNS+I GF G +ALE F M+ K V+ G L+AC+ +E G Q
Sbjct: 195 KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 138/248 (55%), Gaps = 19/248 (7%)
Query: 75 GTNPSHITFVTLLSGCADFPS-----------------NNVMVSTALLDMYAKFGRMDLA 117
G P + TF +LL CA + +NV V L++MY + +D A
Sbjct: 124 GILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSA 183
Query: 118 TVVFD-VMRGCDF-WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTIISVLNVCANV 175
VFD ++ C + A++ G+ +R+ EAL FR MQ ++P+ +T++SVL+ CA +
Sbjct: 184 RCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALL 243
Query: 176 RTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSII 235
+L +G W+H+Y K F V+V L+D++++ G ++ A +F++M + +W+++I
Sbjct: 244 GSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMI 303
Query: 236 VGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQYFDIMKKIYRV 295
V +A +G +++ F M+ + DE++F G L ACSH G +E+G +YF M + +
Sbjct: 304 VAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGI 363
Query: 296 SPQIEHHG 303
P I+H+G
Sbjct: 364 VPSIKHYG 371
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 213 IEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNL----MQKGVFKTDEVSFTG 268
+ +AR +F+ M + +V +NS+ G++ LE F+L ++ G+ D +F
Sbjct: 79 MSYARHLFEAMSEPDIVIFNSMARGYSR---FTNPLEVFSLFVEILEDGIL-PDNYTFPS 134
Query: 269 ALTACSHAGLIEDGLQ 284
L AC+ A +E+G Q
Sbjct: 135 LLKACAVAKALEEGRQ 150
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA 91
T W++ I + G ++ L F RMR P ITF+ LL+ C+
Sbjct: 296 TQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACS 342
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 19/281 (6%)
Query: 44 TTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCA------------ 91
+ V W + I + R+ EA F MR G S T ++LS C
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 92 -----DFPSNNVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFE 144
N+ V TALLD+YAK G + A VF+ M + W++++ G+V+ +E
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 145 EALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLM 204
EAL +R Q +E + T+ SV+ C+N+ L G MH + K F NV V ++ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 205 DVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEV 264
D+Y++ G + + +F + ++ L WN+II GFA + E + F MQ+ +EV
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 265 SFTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
+F+ L+ C H GL+E+G ++F +M+ Y +SP + H+ C+
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406
Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 99/198 (50%), Gaps = 4/198 (2%)
Query: 97 NVMVSTALLDMYAKFGRMDLATVVFDVM--RGCDFWTALLNGFVKRDYFEEALEYFRVMQ 154
+V + L++ Y+K G ++LA VFD M R W ++ + + EAL+ F M+
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 155 ISGVEPDYLTIISVLNVCA-NVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCI 213
G + TI SVL+ C N L +H K N+ V L+D+Y++ G I
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECK-KLHCLSVKTCIDLNLYVGTALLDLYAKCGMI 213
Query: 214 EFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
+ A QVF+ M ++ V+W+S++ G+ N EAL + Q+ + ++ + + + AC
Sbjct: 214 KDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICAC 273
Query: 274 SHAGLIEDGLQYFDIMKK 291
S+ + +G Q ++ K
Sbjct: 274 SNLAALIEGKQMHAVICK 291
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 168 VLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHKRT 227
+L +CA + H + + D + +V + N L++ YS+ G +E ARQVF M +R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 228 LVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTAC 273
LVSWN++I + N EAL+ F M+ FK E + + L+AC
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 54/320 (16%)
Query: 39 KSTIDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTN---PSHITFVTLLSGCADFP- 94
+S T S I HC+S + E + +F R L N P + T L+ C
Sbjct: 65 RSEKPTLFALNSMIRAHCKSP-VPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 95 ----------------SNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--------- 129
N+ V T L+ +YA+ G +D VF+ + DF
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 130 ------------------------WTALLNGFVKRDYFEEALEYFRVMQISGVEPDYLTI 165
W A+++G+ + EAL F +MQ+ GV+ + + +
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 166 ISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSRFGCIEFARQVFQRMHK 225
ISVL+ C + L G W H Y+ + K VR+ TL+D+Y++ G +E A +VF M +
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 226 RTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGALTACSHAGLIEDGLQY 285
+ + +W+S + G A+NGF + LE F+LM++ + V+F L CS G +++G ++
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRH 363
Query: 286 FDIMKKIYRVSPQIEHHGCI 305
FD M+ + + PQ+EH+GC+
Sbjct: 364 FDSMRNEFGIEPQLEHYGCL 383
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 46 VQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNN-------- 97
+ W + IS + + G EA F M+L G + + +++LS C + +
Sbjct: 206 IAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSY 265
Query: 98 ---------VMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEEA 146
V ++T L+D+YAK G M+ A VF M + W++ LNG + E+
Sbjct: 266 IERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKC 325
Query: 147 LEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDF--KDNVRVCNTLM 204
LE F +M+ GV P+ +T +SVL C+ V + G H + +F + + L+
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEG-QRHFDSMRNEFGIEPQLEHYGCLV 384
Query: 205 DVYSRFGCIEFARQVFQRMHKRTLVS-WNSII 235
D+Y+R G +E A + Q+M + + W+S++
Sbjct: 385 DLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 23/111 (20%)
Query: 48 WTSSISRHCRSGCILEAALE-FTRMRLYGTNPSHITFVTLLSGCA------------DFP 94
W+S+++ +G E LE F+ M+ G P+ +TFV++L GC+ D
Sbjct: 309 WSSALNGLAMNG-FGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 95 SNNVMVST------ALLDMYAKFGRMDLATVVFDVM---RGCDFWTALLNG 136
N + L+D+YA+ GR++ A + M W++LL+
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 140/280 (50%), Gaps = 19/280 (6%)
Query: 45 TVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNN------- 97
+V W + I ++G EA F M++ G F ++L C + N
Sbjct: 235 SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHA 294
Query: 98 ----------VMVSTALLDMYAKFGRMDLATVVFDVMRGCDF--WTALLNGFVKRDYFEE 145
+ V +AL+DMY K + A VFD M+ + WTA++ G+ + EE
Sbjct: 295 CIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEE 354
Query: 146 ALEYFRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMD 205
A++ F MQ SG++PD+ T+ ++ CANV +L G H V V N+L+
Sbjct: 355 AVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVT 414
Query: 206 VYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVS 265
+Y + G I+ + ++F M+ R VSW +++ +A G E ++ F+ M + K D V+
Sbjct: 415 LYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVT 474
Query: 266 FTGALTACSHAGLIEDGLQYFDIMKKIYRVSPQIEHHGCI 305
TG ++ACS AGL+E G +YF +M Y + P I H+ C+
Sbjct: 475 LTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 8/201 (3%)
Query: 93 FPSNNVMVSTALLDMYAKFGRMDLATVVFDVMRGCD--FWTALLNGFVKRDYFEEALE-Y 149
P N+ LL Y+K G + F+ + D W L+ G+ A++ Y
Sbjct: 67 IPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 126
Query: 150 FRVMQISGVEPDYLTIISVLNVCANVRTLGIGLWMHRYVPKQDFKDNVRVCNTLMDVYSR 209
+M+ +T++++L + ++ + +G +H V K F+ + V + L+ +Y+
Sbjct: 127 NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYAN 186
Query: 210 FGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFKTDEVSFTGA 269
GCI A++VF + R V +NS++ G G + +AL+ F M+K D VS+
Sbjct: 187 VGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAM 241
Query: 270 LTACSHAGLIEDGLQYFDIMK 290
+ + GL ++ ++ F MK
Sbjct: 242 IKGLAQNGLAKEAIECFREMK 262
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 42 IDTTVQWTSSISRHCRSGCILEAALEFTRMRLYGTNPSHITFVTLLSGCADFPSNNVMVS 101
+ V WT+ +S + + G +E F +M +G P +T ++S C+
Sbjct: 434 VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS---------R 484
Query: 102 TALLDMYAKFGRMDLATVVFDVMRGCDFWTALLNGFVKRDYFEEALEYFRVMQISGVEPD 161
L++ ++ L T + ++ ++ +++ F + EEA+ + M PD
Sbjct: 485 AGLVEKGQRY--FKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PD 539
Query: 162 YLTIISVLNVCANVRTLGIGLW 183
+ ++L+ C N L IG W
Sbjct: 540 AIGWTTLLSACRNKGNLEIGKW 561
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 201 NTLMDVYSRFGCIEFARQVFQRMHKRTLVSWNSIIVGFAVNGFVGEALEYFNLMQKGVFK 260
N ++ Y+ +AR+VF R+ + L SWN++++ ++ G + E F +
Sbjct: 45 NNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP----D 100
Query: 261 TDEVSFTGALTACSHAGLIEDGLQYFDIMKK 291
D V++ + S +GL+ ++ ++ M +
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR 131
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,849,512
Number of Sequences: 539616
Number of extensions: 4163183
Number of successful extensions: 15108
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 11142
Number of HSP's gapped (non-prelim): 1807
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)