BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036267
(145 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Thermotoga Maritima
Length = 216
Score = 63.2 bits (152), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Query: 3 SEQLKALNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERA 62
SE LK G+ ++V+ +K A T++P+ A + +L L +F+ + GD+ +
Sbjct: 80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVXVFGDQVKNG 139
Query: 63 KPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADL-HVVGLA-TRNPERLLLDAKA 120
KP P+ YL +E LNV + VFEDS SG++A +A + + G+ + N + LL+A A
Sbjct: 140 KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGA 199
Query: 121 SFIIKDYE 128
++K E
Sbjct: 200 VALVKPEE 207
>pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
pdb|3E58|B Chain B, Crystal Structure Of Putative Beta-Phosphoglucomutase From
Streptococcus Thermophilus
Length = 214
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 19 VEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNV 78
V+ GL+ ++S +A+ + + L GFF+ ++ G+E + +KP P+ YL A++ LNV
Sbjct: 101 VKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNV 160
Query: 79 SKDHTFVFEDSVSGIKAGVAADLHV 103
+ EDS GI AGVAAD+ V
Sbjct: 161 QASRALIIEDSEKGIAAGVAADVEV 185
>pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like
Protein Of Unknown Function Atu0790 From Agrobacterium
Tumefaciens Str. C58
Length = 229
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 58/136 (42%), Gaps = 9/136 (6%)
Query: 12 LDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDE---CERAKPFPDP 68
+D VK + R +NS + +TK+GL +F I + +R KP PD
Sbjct: 89 IDGVKFALSRLTTPRCICSNSSSHRLDXXLTKVGLKPYFAPHIYSAKDLGADRVKPKPDI 148
Query: 69 YLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN---PERL--LLDAKASFI 123
+L VS D V EDSV GI AA V+G + P L DA A +
Sbjct: 149 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGXRVIGFTGASHTYPSHADRLTDAGAETV 208
Query: 124 IKDYED-PKLWAALEE 138
I +D P + AA E
Sbjct: 209 ISRXQDLPAVIAAXAE 224
>pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
pdb|2YY6|B Chain B, Crystal Structure Of The Phosphoglycolate Phosphatase From
Aquifex Aeolicus Vf5
Length = 213
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 23 GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDH 82
G K A V+N ++ ++ L LSG+F+ I+ GD KP P P LK +EIL +
Sbjct: 97 GFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 156
Query: 83 TFVFEDSVSGIKAGVAA 99
+ D+ + I+AG A
Sbjct: 157 ALIVGDTDADIEAGKRA 173
>pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase
From Aquifex Aeolicus
Length = 222
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 23 GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDH 82
G K A V+N ++ ++ L LSG+F+ I+ GD KP P P LK +EIL +
Sbjct: 99 GFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158
Query: 83 TFVFEDSVSGIKAGVAA 99
+ D+ + I+AG A
Sbjct: 159 ALIVGDTDADIEAGKRA 175
>pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 6-Phosphate
pdb|1O08|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An
Enzyme Catalyzed Phosphoryl Transfer Reaction Observed
On Cocrystallization With Glucose 1-Phosphate
pdb|1Z4N|A Chain A, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4N|B Chain B, Structure Of Beta-phosphoglucomutase With Inhibitor Bound
Alpha-galactose 1-phosphate Cocrystallized With Fluoride
pdb|1Z4O|A Chain A, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1Z4O|B Chain B, Structure Of Beta-Phosphoglucomutase With Inhibitor Bound
Alpha-Galactose 1-Phosphate
pdb|1ZOL|A Chain A, Native Beta-Pgm
pdb|2WF5|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Trifluoromagnesate
pdb|2WHE|A Chain A, Structure Of Native Beta-Phosphoglucomutase In An Open
Conformation Without Bound Ligands.
pdb|2WF7|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphonate And Aluminium Tetrafluoride
pdb|2WF6|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phospahte And Aluminium Tetrafluoride
pdb|2WF8|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, Glucose-1-Phosphate And Beryllium
Trifluoride
pdb|2WF9|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Glucose- 6-Phosphate, And Beryllium Trifluoride, Crystal
Form 2
pdb|2WFA|A Chain A, Structure Of Beta-Phosphoglucomutase Inhibited With
Beryllium Trifluoride, In An Open Conformation
Length = 221
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 32 SPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVS 91
S N ++ ++ L+G+F+AI E +KP PD ++ A + V+ + EDS +
Sbjct: 114 SASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA 173
Query: 92 GIKA 95
GI+A
Sbjct: 174 GIQA 177
>pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
pdb|1LVH|B Chain B, The Structure Of Phosphorylated Beta-phosphoglucomutase
From Lactoccocus Lactis To 2.3 Angstrom Resolution
Length = 221
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 32 SPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVS 91
S N ++ ++ L+G+F+AI E +KP PD ++ A + V+ + EDS +
Sbjct: 114 SASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA 173
Query: 92 GIKA 95
GI+A
Sbjct: 174 GIQA 177
>pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying
Discrimination Between Substrate And Solvent In Beta-
Phosphoglucomutase Catalysis
Length = 221
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 32 SPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVS 91
S N ++ ++ L+G+F+AI E +KP PD ++ A + V+ + EDS +
Sbjct: 114 SASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQA 173
Query: 92 GIKA 95
GI+A
Sbjct: 174 GIQA 177
>pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
pdb|4GIB|B Chain B, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase
(Pgmb) From Clostridium Difficile
Length = 250
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 32 SPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVS 91
S NA ++ LG+S F+ I +C+ KP P+ +L + + LNV+ + ED+ +
Sbjct: 139 SASKNAINVLNHLGISDKFDFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASA 198
Query: 92 GIKAGVAADLHVVGLAT 108
GI A +A++ VG+
Sbjct: 199 GIDAINSANMFSVGVGN 215
>pdb|2HSZ|A Chain A, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
pdb|2HSZ|B Chain B, Crystal Structure Of A Predicted Phosphoglycolate
Phosphatase (hs_0176) From Haemophilus Somnus 129pt At
1.90 A Resolution
Length = 243
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 14 NVKKWVEGC---GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYL 70
NVK+ +E G A VTN P + + ++T G+ F + G KP P P+
Sbjct: 118 NVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEXLGGQSLPEIKPHPAPFY 177
Query: 71 KAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLAT-RNPERLLLDAKASFIIKDYED 129
+ DS + I A +A VVGL N + +K +I D+ D
Sbjct: 178 YLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFAD 237
>pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus
Length = 247
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 48 GFFEA--IIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVG 105
G F+A + + + KP P+PYL A++ + V E++ G++AGVAA + +
Sbjct: 148 GIFQANLXVTAFDVKYGKPNPEPYLXALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIA 207
Query: 106 LATRNP--ERLLLDAKASFIIKDYED-PKLWAALEELDMKKD 144
+ T P + +LL+ A+ + D K W L+ +K+D
Sbjct: 208 VNT-GPLHDNVLLNEGANLLFHSXPDFNKNWETLQSA-LKQD 247
>pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb
pdb|4EX7|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase In
Complex With Free Phosphate
Length = 237
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDP 68
L GLD + + + V + RA AEL GL I D ER KP PD
Sbjct: 110 LEGLDRLSAAGFRLAMATSKVEKAARAIAELT----GLDTRLTVIAGDDSVERGKPHPDM 165
Query: 69 YLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLA--TRNPERLL 115
L L + + V D V + G AA + V+G++ P+ L+
Sbjct: 166 ALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELM 214
>pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
pdb|3NAS|B Chain B, The Crystal Structure Of Beta-Phosphoglucomutase From
Bacillus Subtilis
Length = 233
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 22 CGLK----RAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILN 77
C LK + + +S R NA ++ +L + F AI+ + KP PD +L A L+
Sbjct: 102 CQLKNENIKIGLASSSR-NAPKILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAXLD 160
Query: 78 VSKDHTFVFEDSVSGIKAGVAADLHVVGLATRNP 111
VS ED+ +GI A +A VG+ P
Sbjct: 161 VSPADCAAIEDAEAGISAIKSAGXFAVGVGQGQP 194
>pdb|2QLT|A Chain A, Crystal Structure Of An Isoform Of
Dl-Glycerol-3-Phosphatase, Rhr2p, From Saccharomyces
Cerevisiae
Length = 275
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 51 EAIIIGDECERAKPFPDPYLKA-------IEILNVSKDHTFVFEDSVSGIKAGVAADLHV 103
E I ++ ++ KP P+PYLK I + SK VFED+ +GI AG AA +
Sbjct: 158 EYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKI 217
Query: 104 VGLATRNPERLLLDAKASFIIKDYE 128
VG+AT L + I+K++E
Sbjct: 218 VGIATTFDLDFLKEKGCDIIVKNHE 242
>pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From
Ehrlichia Chaffeensis At 1.9a Resolution
Length = 231
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 23 GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVS-KD 81
+ A V+N I L+ +F++II + KP P+P L A+ +N+
Sbjct: 119 NITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178
Query: 82 HTFVFEDSVSGIKAGVAADLHVVGLATRNPERLLLDAKASFIIKDY 127
F DS+S I++ + A + + N + +L K + I+++
Sbjct: 179 EVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKDILSFKNFYDIRNF 224
>pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate
Length = 243
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|C Chain C, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|D Chain D, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|E Chain E, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|F Chain F, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|G Chain G, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
pdb|3QU4|H Chain H, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13ala Mutant
Length = 243
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 48 GFF--EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVG 105
G F E ++ + + KP P+PYL A++ + D V E++ G++AG A + +
Sbjct: 149 GMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIA 208
Query: 106 LATRNPE-RLLLDAKASFII 124
+ T + ++LLDA A +
Sbjct: 209 VNTGPLDGQVLLDAGADLLF 228
>pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium
And Phosphate
pdb|3QYP|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium
And Phosphate
pdb|3QUC|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asn Mutant Complexed With Sulfate
Length = 243
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Glu47asp Mutant Complexed With
Sulfate, A Closed Cap Conformation
Length = 243
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp11asn Mutant
pdb|3QU5|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp11asn Mutant
Length = 243
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant, An Open Cap
Conformation
pdb|3QU7|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With Calcium
And Phosphate
pdb|3QU7|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With Calcium
And Phosphate
pdb|3QU9|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, Asp13asn Mutant Complexed With
Magnesium And Tartrate
Length = 243
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, An Open Cap Conformation
pdb|3QU2|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|C Chain C, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QU2|D Chain D, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron, A Closed Cap Conformation
pdb|3QX7|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Phosphate, A Closed Cap
Conformation
pdb|3QXG|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Calcium, A Closed Cap
Conformation
pdb|3QXG|B Chain B, Crystal Structure Of Pyrophosphatase From Bacteroides
Thetaiotaomicron Complexed With Calcium, A Closed Cap
Conformation
Length = 243
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 51 EAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
E ++ + + KP P+PYL A++ + D V E++ G++AG A + + + T
Sbjct: 154 ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGP 213
Query: 111 PE-RLLLDAKASFII 124
+ ++LLDA A +
Sbjct: 214 LDGQVLLDAGADLLF 228
>pdb|2GFH|A Chain A, Crystal Structure Of A N-acetylneuraminic Acid Phosphatase
(nanp) From Mus Musculus At 1.90 A Resolution
Length = 260
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 29 VTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFED 88
+TN R I +F+AI+IG E + KP P + ++L V + D
Sbjct: 142 LTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGD 201
Query: 89 SV-SGIKAGVAADL 101
++ + I+ G+ A L
Sbjct: 202 TLETDIQGGLNAGL 215
>pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12
pdb|1TE2|B Chain B, Putative Phosphatase Ynic From Escherichia Coli K12
Length = 226
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 12 LDNVKKWVEGC---GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDP 68
L V++ V C GL + SP E ++T L F+A+ ++ +KP P
Sbjct: 96 LPGVREAVALCKEQGLLVGLASASPLHXLEKVLTXFDLRDSFDALASAEKLPYSKPHPQV 155
Query: 69 YLKAIEILNVSKDHTFVFEDSVSGIKAGVAA 99
YL L V EDSV+G A AA
Sbjct: 156 YLDCAAKLGVDPLTCVALEDSVNGXIASKAA 186
>pdb|1QQ5|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
pdb|1QQ5|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
Length = 253
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 13 DNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKA 72
D + E LKRA ++N + ++ GL+ F+A+I D KP PD Y
Sbjct: 97 DAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALV 156
Query: 73 IEILNVS 79
E+L V+
Sbjct: 157 EEVLGVT 163
>pdb|1AQ6|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
pdb|1AQ6|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus
Length = 253
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 13 DNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKA 72
D + E LKRA ++N + ++ GL+ F+A+I D KP PD Y
Sbjct: 97 DAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALV 156
Query: 73 IEILNVS 79
E+L V+
Sbjct: 157 EEVLGVT 163
>pdb|1QQ7|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloropropionic Acid Covalently Bound
pdb|1QQ7|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloropropionic Acid Covalently Bound
pdb|1QQ6|A Chain A, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloroacetic Acid Covalently Bound
pdb|1QQ6|B Chain B, Structure Of L-2-Haloacid Dehalogenase From Xanthobacter
Autotrophicus With Chloroacetic Acid Covalently Bound
Length = 253
Score = 33.9 bits (76), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 13 DNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKA 72
D + E LKRA ++N + ++ GL+ F+A+I D KP PD Y
Sbjct: 97 DAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALV 156
Query: 73 IEILNVS 79
E+L V+
Sbjct: 157 EEVLGVT 163
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Query: 29 VTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFED 88
+TN R I +F+A+++G E KP P + +L V + D
Sbjct: 152 LTNGDRQTQREKIEACACQSYFDAVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGD 211
Query: 89 SV-SGIKAGVAADLHVVGLATRN 110
++ + I+ G+ A L +N
Sbjct: 212 TLETDIQGGLNAGLKATVWINKN 234
>pdb|2IOF|K Chain K, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
Sodium Borohydride-Reduced Substrate Intermediate
Length = 267
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+NG+ V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|2IOF|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
Sodium Borohydride-Reduced Substrate Intermediate
Length = 267
Score = 32.7 bits (73), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+NG+ V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|2HI0|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
pdb|2HI0|B Chain B, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Yp_619066.1) From Lactobacillus Delbrueckii Subsp.
Bulgaricus Atcc Baa-365 At 1.51 A Resolution
Length = 240
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 11 GLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYL 70
G+ ++ K + G+K A V+N P ++++ +L G F+ + R KP PD
Sbjct: 114 GILDLXKNLRQKGVKLAVVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRRKPAPDXTS 172
Query: 71 KAIEILNVSKDHTFVFEDS 89
+ +++L V +D DS
Sbjct: 173 ECVKVLGVPRDKCVYIGDS 191
>pdb|2IOH|A Chain A, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|B Chain B, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|C Chain C, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
pdb|2IOH|D Chain D, Crystal Structure Of Phosphonoacetaldehyde Hydrolase With
A K53r Mutation
Length = 267
Score = 32.7 bits (73), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+NG+ V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|1SWV|A Chain A, Crystal Structure Of The D12a Mutant Of
Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1SWV|B Chain B, Crystal Structure Of The D12a Mutant Of
Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1SWW|A Chain A, Crystal Structure Of The Phosphonoacetaldehyde Hydrolase
D12a Mutant Complexed With Magnesium And Substrate
Phosphonoacetaldehyde
pdb|1SWW|B Chain B, Crystal Structure Of The Phosphonoacetaldehyde Hydrolase
D12a Mutant Complexed With Magnesium And Substrate
Phosphonoacetaldehyde
Length = 267
Score = 32.7 bits (73), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+NG+ V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From
Escherichia Coli, Target Efi-501172, With Bound Mg, Open
Lid
Length = 243
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 36 NAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKA 95
NA ++ L L FF + + +KP P+ +L A L V ED+ +GI A
Sbjct: 122 NAPTILAALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIEDAQAGIDA 181
Query: 96 GVAADLHVVGL-ATRNPERLLLDAKASF 122
A+ + VG+ A +LLL + S
Sbjct: 182 INASGMRSVGIGAGLTGAQLLLPSTESL 209
>pdb|3UM9|A Chain A, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Bpro0530
pdb|3UM9|B Chain B, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Bpro0530
Length = 230
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 23 GLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSK 80
GLK A ++N R + ++ GL+ F+ +I DE KP Y A++ L++ +
Sbjct: 112 GLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGE 169
>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A.
Tumefaciens In Complex With Adp
pdb|1RZU|B Chain B, Crystal Structure Of The Glycogen Synthase From A.
Tumefaciens In Complex With Adp
Length = 485
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 124 IKDYEDPKLWAALEELDMKKD 144
++ Y DPKLW +++L MK D
Sbjct: 438 VRYYHDPKLWTQMQKLGMKSD 458
>pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase
(Np_784602.1) From Lactobacillus Plantarum At 1.50 A
Resolution
Length = 209
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 53 IIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLA 107
I D+ + KP P P L A+E +NV+ + DSVS + AA++ GLA
Sbjct: 128 TISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD-FGLA 181
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 14/140 (10%)
Query: 6 LKALNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPF 65
L+ + G V ++ G + +T+ I +L L FFE +II D KP
Sbjct: 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPH 152
Query: 66 PDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLAT------RNPERLLLDAK 119
P + KA++ NV + + D + G VG+ T ++ ER L K
Sbjct: 153 PKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKR----VGMKTVWFRYGKHSERELEYRK 208
Query: 120 ASFIIKDYEDPKLWAALEEL 139
+ DYE L + LE L
Sbjct: 209 YA----DYEIDNLESLLEVL 224
>pdb|3M9L|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5
pdb|2YBD|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Phosphate
pdb|3R09|A Chain A, Crystal Structure Of Probable Had Family Hydrolase From
Pseudomonas Fluorescens Pf-5 With Bound Mg
Length = 205
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Query: 21 GCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFPDPYLKAIEILNVS 79
G G + +T + R A + + +GL+ F EA ++G + KP P LK E +VS
Sbjct: 84 GRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVS 143
Query: 80 KDHTFVFEDSVSGIKAGVAADLHVV 104
D + G AA V
Sbjct: 144 PSRXVXVGDYRFDLDCGRAAGTRTV 168
>pdb|1RDF|A Chain A, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|B Chain B, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|C Chain C, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|D Chain D, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|E Chain E, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
pdb|1RDF|F Chain F, G50p Mutant Of Phosphonoacetaldehyde Hydrolase In Complex
With Substrate Analogue Vinyl Sulfonate
Length = 267
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+N + V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|1RQL|A Chain A, Crystal Structure Of Phosponoacetaldehyde Hydrolase
Complexed With Magnesium And The Inhibitor Vinyl
Sulfonate
pdb|1RQL|B Chain B, Crystal Structure Of Phosponoacetaldehyde Hydrolase
Complexed With Magnesium And The Inhibitor Vinyl
Sulfonate
pdb|1RQN|A Chain A, Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
pdb|1RQN|B Chain B, Phosphonoacetaldehyde Hydrolase Complexed With Magnesium
Length = 267
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+N + V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 105 INAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 164
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 165 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 204
>pdb|1FEZ|A Chain A, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|B Chain B, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|C Chain C, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
pdb|1FEZ|D Chain D, The Crystal Structure Of Bacillus Cereus
Phosphonoacetaldehyde Hydrolase Complexed With
Tungstate, A Product Analog
Length = 256
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 9 LNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFF-EAIIIGDECERAKPFP- 66
+N + V + G+K + T R +++ + L G+ + ++ D+ +P+P
Sbjct: 101 INAVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPW 160
Query: 67 DPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGL 106
Y A+E+ +H D+VS +K G A + VG+
Sbjct: 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGV 200
>pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Phosphate And Sodium
pdb|4EEL|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Citrate And Sodium
pdb|4EEN|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From
Deinococcus Radiodurans R1 (Target Efi-501256) With
Bound Magnesium
Length = 259
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 2 ASEQLKALNGLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLS-----GFFEAIIIG 56
A + A+ G + + G+ A +NS R L + GL+ ++ +G
Sbjct: 105 AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG 164
Query: 57 DECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSG 92
R KP PD Y A + L + + V EDSV+G
Sbjct: 165 G---RGKPHPDLYTFAAQQLGILPERCVVIEDSVTG 197
>pdb|2ZG6|A Chain A, Crystal Structure Of Hypothetical Protein; Probable 2-
Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii
pdb|2ZG6|B Chain B, Crystal Structure Of Hypothetical Protein; Probable 2-
Haloalkanoic Acid Dehalogenase From Sulfolobus Tokodaii
Length = 220
Score = 29.3 bits (64), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 13 DNVKKWVEGC---GLKRAAVTN-SPRANAELMITKLGLSGFFEAIIIGDECERAKPFP 66
D+ +++EG G K A V+N SPR ++ K L +F+A+ + E + KP P
Sbjct: 98 DDTLEFLEGLKSNGYKLALVSNASPRVKT--LLEKFDLKKYFDALALSYEIKAVKPNP 153
>pdb|3IRU|A Chain A, Crystal Structure Of Phoshonoacetaldehyde Hydrolase Like
Protein From Oleispira Antarctica
pdb|3IRU|B Chain B, Crystal Structure Of Phoshonoacetaldehyde Hydrolase Like
Protein From Oleispira Antarctica
Length = 277
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 52 AIIIGDECERAKPFPDPYLK-AIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLATRN 110
+ + + R +PFPD LK A+E+ + +D++ GI+ G+ A VG++
Sbjct: 157 STVFATDVVRGRPFPDXALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGXWTVGVSCSG 216
Query: 111 PE 112
E
Sbjct: 217 NE 218
>pdb|2GO7|A Chain A, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|B Chain B, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|C Chain C, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|D Chain D, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
Length = 207
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 11 GLDNVKKWVEGCGLKRAAVTNSPRANAELMITKLGLSGFFEAIIIGDECERAKPFPDPYL 70
G V W + G+++ T+ NA ++ LG+ +F I+ KP P+
Sbjct: 89 GAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAAT 147
Query: 71 KAIEILNVSKDHTFVFED 88
++ ++ D+T+ D
Sbjct: 148 YLLDKYQLNSDNTYYIGD 165
>pdb|2Q2C|A Chain A, Crystal Structures Of The Arginine-, Lysine-,
Histidine-Binding Protein Artj From The Thermophilic
Bacterium Geobacillus Stearothermophilus
pdb|2Q2C|B Chain B, Crystal Structures Of The Arginine-, Lysine-,
Histidine-Binding Protein Artj From The Thermophilic
Bacterium Geobacillus Stearothermophilus
pdb|2Q2C|C Chain C, Crystal Structures Of The Arginine-, Lysine-,
Histidine-Binding Protein Artj From The Thermophilic
Bacterium Geobacillus Stearothermophilus
pdb|2Q2C|D Chain D, Crystal Structures Of The Arginine-, Lysine-,
Histidine-Binding Protein Artj From The Thermophilic
Bacterium Geobacillus Stearothermophilus
pdb|2PVU|A Chain A, Crystal Structures Of The Arginine-, Lysine-,
Histidine-Binding Protein Artj From The Thermophilic
Bacterium Geobacillus Stearothermophilus
pdb|2Q2A|A Chain A, Crystal Structures Of The Arginine-, Lysine-, Histidine-
Binding Protein Artj From The Thermophilic Bacterium
Geobacillus Stearothermophilus
pdb|2Q2A|B Chain B, Crystal Structures Of The Arginine-, Lysine-, Histidine-
Binding Protein Artj From The Thermophilic Bacterium
Geobacillus Stearothermophilus
pdb|2Q2A|C Chain C, Crystal Structures Of The Arginine-, Lysine-, Histidine-
Binding Protein Artj From The Thermophilic Bacterium
Geobacillus Stearothermophilus
pdb|2Q2A|D Chain D, Crystal Structures Of The Arginine-, Lysine-, Histidine-
Binding Protein Artj From The Thermophilic Bacterium
Geobacillus Stearothermophilus
Length = 272
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
Query: 44 LGLSGFFEAIIIGDECERAKPFPDPYLKAIEILNVSK 80
+G+SG I I DE +++ F DPY +A +++ V +
Sbjct: 103 MGISG----ITITDERKQSYDFSDPYFEATQVILVKQ 135
>pdb|4F72|A Chain A, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Asp12ala
Mutant, Complex With Magnesium And Inorganic Phosphate
pdb|4F72|B Chain B, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Asp12ala
Mutant, Complex With Magnesium And Inorganic Phosphate
Length = 229
Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 49 FFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLAT 108
+FE + E + AKP P+ + E + TF +D S I VA +L G++T
Sbjct: 159 YFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDD--SEINCKVAQEL---GIST 213
Query: 109 RNPE 112
P+
Sbjct: 214 YTPK 217
>pdb|4DFD|A Chain A, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Magnesium
Complex
pdb|4DFD|B Chain B, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Magnesium
Complex
pdb|4DCC|A Chain A, Crystal Structure Of Had Family Enzyme Bt-2542 From
Bacteroides Thetaiotaomicron (Target Efi-501088)
pdb|4F71|A Chain A, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Wild-Type
Protein, Complex With Magnesium And Inorganic Phosphate
pdb|4F71|B Chain B, Crystal Structure Of Had Family Enzyme Bt-2542 (Target
Efi-501088) From Bacteroides Thetaiotaomicron, Wild-Type
Protein, Complex With Magnesium And Inorganic Phosphate
Length = 229
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 49 FFEAIIIGDECERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADLHVVGLAT 108
+FE + E + AKP P+ + E + TF +D S I VA +L G++T
Sbjct: 159 YFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDD--SEINCKVAQEL---GIST 213
Query: 109 RNPE 112
P+
Sbjct: 214 YTPK 217
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 21/38 (55%)
Query: 36 NAELMITKLGLSGFFEAIIIGDECERAKPFPDPYLKAI 73
N + +LGL+ +F + ++ KP P P+L+A+
Sbjct: 128 NGNADVRRLGLADYFAFALCAEDLGIGKPDPAPFLEAL 165
>pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From
Agrobacterium Tumefaciens (Non-Complexed Form)
pdb|1RZV|B Chain B, Crystal Structure Of The Glycogen Synthase From
Agrobacterium Tumefaciens (Non-Complexed Form)
Length = 485
Score = 26.2 bits (56), Expect = 6.5, Method: Composition-based stats.
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 124 IKDYEDPKLWAALEELDMKKD 144
++ Y DPKLW ++L K D
Sbjct: 438 VRYYHDPKLWTQXQKLGXKSD 458
>pdb|3L8E|A Chain A, Crystal Structure Of Apo Form Of D,D-Heptose 1.7-
Bisphosphate Phosphatase From E. Coli
pdb|3L8E|B Chain B, Crystal Structure Of Apo Form Of D,D-Heptose 1.7-
Bisphosphate Phosphatase From E. Coli
Length = 187
Score = 26.2 bits (56), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 59 CERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADL 101
C+ KP P L A + L++ +++ D + ++A VAA++
Sbjct: 107 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANV 149
>pdb|2GMW|A Chain A, Crystal Structure Of D,D-Heptose 1.7-Bisphosphate
Phosphatase From E. Coli.
pdb|2GMW|B Chain B, Crystal Structure Of D,D-Heptose 1.7-Bisphosphate
Phosphatase From E. Coli.
pdb|3ESQ|A Chain A, Crystal Structure Of Calcium-Bound D,D-Heptose
1.7-Bisphosphate Phosphatase From E. Coli
pdb|3ESR|A Chain A, Crystal Structure Of D,D-Heptose1.7-Bisphosphate
Phosphatase From E. Coli In Complex With Calcium And
Phosphate
pdb|3L1U|A Chain A, Crystal Structure Of Calcium-Bound Gmhb From E. Coli.
pdb|3L1U|B Chain B, Crystal Structure Of Calcium-Bound Gmhb From E. Coli.
pdb|3L1V|A Chain A, Crystal Structure Of Gmhb From E. Coli In Complex With
Calcium And Phosphate.
pdb|3L1V|B Chain B, Crystal Structure Of Gmhb From E. Coli In Complex With
Calcium And Phosphate
Length = 211
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 59 CERAKPFPDPYLKAIEILNVSKDHTFVFEDSVSGIKAGVAADL 101
C+ KP P L A + L++ +++ D + ++A VAA++
Sbjct: 127 CDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANV 169
>pdb|3UMG|A Chain A, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|B Chain B, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|C Chain C, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|D Chain D, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|E Chain E, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|F Chain F, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|G Chain G, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
pdb|3UMG|H Chain H, Crystal Structure Of The Defluorinating L-2-Haloacid
Dehalogenase Rha0230
Length = 254
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 35 ANAELMITKLGLSGFFEAIIIGDECERA-KPFPDPYLKAIEILNVSKDHTFVFEDSVSGI 93
N L++ +G +IIG + R KP P YL+ ++L + + +
Sbjct: 140 GNTSLLLDMAKNAGIPWDVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDL 199
Query: 94 KAGVAADLHVVGLAT 108
+A H GLAT
Sbjct: 200 EAA-----HATGLAT 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,321,530
Number of Sequences: 62578
Number of extensions: 162620
Number of successful extensions: 433
Number of sequences better than 100.0: 71
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 71
length of query: 145
length of database: 14,973,337
effective HSP length: 89
effective length of query: 56
effective length of database: 9,403,895
effective search space: 526618120
effective search space used: 526618120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)