BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036268
MGLVSWEMVYDSLDDALFEKNEKFKTTRLKNLDHNIEKYNLYGFTSGVQAWIYEAIGGLP
STCVVKTKNKIPRIVQWKPMASSRINFAEVYSFFNDESRIGDVLQTLEPNSKESSKKYWL
TVKDYMPSIPDWVHKVFLNQLWNNGDCAVDSLVFEDHLNNYLCGRQHTMSKSMTDVDMLL
IPVNLDGAHWVVARVDFRKNKVWIYDSLLTFCDDKRYKLKFKLLEVIFPRWLEYVGFYNI
RPELRSADP

High Scoring Gene Products

Symbol, full name Information P value
AT1G37020 protein from Arabidopsis thaliana 1.7e-05
AT5G45570 protein from Arabidopsis thaliana 8.3e-05
AT4G08430 protein from Arabidopsis thaliana 0.00023

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036268
        (249 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2203058 - symbol:AT1G37020 species:3702 "Arabi...    89  1.7e-05   2
TAIR|locus:2157141 - symbol:AT5G45570 species:3702 "Arabi...    91  8.3e-05   2
TAIR|locus:2115860 - symbol:AT4G08430 species:3702 "Arabi...    86  0.00023   2


>TAIR|locus:2203058 [details] [associations]
            symbol:AT1G37020 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002684 GO:GO:0008234 GO:GO:0006508 IPI:IPI00522638
            RefSeq:NP_174894.1 UniGene:At.51985 ProteinModelPortal:F4I3A8
            EnsemblPlants:AT1G37020.1 GeneID:840613 KEGG:ath:AT1G37020
            Uniprot:F4I3A8
        Length = 611

 Score = 89 (36.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
 Identities = 30/118 (25%), Positives = 56/118 (47%)

Query:   128 SIPDWVH-KVFLNQLWN--NGDCAVDSLVFE--DHLNNYLCGRQHT----MSKSMTDVDM 178
             S+ DW+   + + ++ N  N   + D   +    +  N+L G  HT     +K  T+VD 
Sbjct:   400 SLMDWLGLMILIRKMKNDYNKHYSSDFKTYNWTGYYVNHLNGTSHTDAATNNKWFTNVDH 459

Query:   179 LLIPVNLDGAHWVVARVDFRKNKVWIYDSLLTFCDDKRYKLKFKLLEVIFPRWL-EYV 235
             L   + ++  HWV    + + N++++YDS+ T  ++     +   L  I P  L EY+
Sbjct:   460 LYGCLFVNENHWVALDFNLKTNRIYVYDSIPTPVEELEMVQQCMFLRKIIPTMLSEYI 517

 Score = 84 (34.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
 Identities = 26/119 (21%), Positives = 56/119 (47%)

Query:    29 LKNLDHNIEKYNLYGFTSGVQAWIYEAIGGLPSTCVVK--TKNKIPRIVQWKPMASSRIN 86
             +K +D+    Y ++G    +  WIYE++ GL      +  T N +  ++ W+  + +RI 
Sbjct:    76 VKIIDYKKNSYGIHGCVYALWIWIYESMPGLREIYGFRRATTNGVA-LLDWRS-SRARIK 133

Query:    87 FAEVYSFFNDESRIGDVLQTLEPNSKESSKKYWLTVKDYMP-SIPDWVHKVFLNQLWNN 144
             F +   F   E    + ++ + P+S E+    W  + +    ++ + +  +  N+L NN
Sbjct:   134 FKK---FIETEKVAHEEVRHMLPDSLENMYPKWSDLPENQDMTLDNLIRDIIHNRLRNN 189


>TAIR|locus:2157141 [details] [associations]
            symbol:AT5G45570 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=ISS] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008234 GO:GO:0006508
            InterPro:IPR015410 Pfam:PF09331 EMBL:AB022213 IPI:IPI00546567
            RefSeq:NP_199370.1 UniGene:At.55389 ProteinModelPortal:Q9FH44
            EnsemblPlants:AT5G45570.1 GeneID:834593 KEGG:ath:AT5G45570
            TAIR:At5g45570 eggNOG:NOG306275 HOGENOM:HOG000131699
            PhylomeDB:Q9FH44 ProtClustDB:CLSN2685971 Genevestigator:Q9FH44
            Uniprot:Q9FH44
        Length = 921

 Score = 91 (37.1 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 21/79 (26%), Positives = 35/79 (44%)

Query:   154 FEDHLNNYLCGRQHTMSKSMTDVDMLLIPVNLDGAHWVVARVDFRKNKVWIYDSLLTFCD 213
             +ED +N        T  K   DVD L   + ++G HWV   +D    +V +YDS+ +   
Sbjct:   746 YEDQVNGTAHCEAATNKKWFVDVDHLYAYLFVNGNHWVALDIDLTNKRVNVYDSIPSLTT 805

Query:   214 DKRYKLKFKLLEVIFPRWL 232
             D    ++   +  + P  L
Sbjct:   806 DTEMAIQCMFVMTMIPAML 824

 Score = 79 (32.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 25/118 (21%), Positives = 58/118 (49%)

Query:    29 LKNLDHNIEKYNLYGFTSGVQAWIYEAIGGLPSTCVVKTKNK--IPRIVQWKPMASSRIN 86
             +K + ++ + Y ++G    +  WIYE++ G+   C  +  N   +P ++ W+  +  R N
Sbjct:   215 VKIVKYDGDSYVIHGCVQTLLVWIYESVPGIGEACGFRKTNLTGVP-LLDWRS-SRKRFN 272

Query:    87 FAEVYSFFNDESRI-GDV-LQTLEPNSKESSKKYWL-TVKDYMPSIPDWVHKVFLNQL 141
             F    +F   E    G V ++ + P S+E+    W  + +++  ++ + +  +  N+L
Sbjct:   273 FT---AFIEKEKAAHGQVRVRHMIPVSEENMYPQWSDSAENHDTALDNLLKDIIHNRL 327


>TAIR|locus:2115860 [details] [associations]
            symbol:AT4G08430 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
            "proteolysis" evidence=IEA;ISS] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA;ISS] InterPro:IPR003653
            Pfam:PF02902 PROSITE:PS50600 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006508 EMBL:AL161511
            InterPro:IPR015410 Pfam:PF09331 eggNOG:NOG306275
            HOGENOM:HOG000131699 ProtClustDB:CLSN2685971 EMBL:AL110116
            IPI:IPI00527591 PIR:T14513 RefSeq:NP_192583.1 UniGene:At.54202
            ProteinModelPortal:Q9SW62 EnsemblPlants:AT4G08430.1 GeneID:826402
            KEGG:ath:AT4G08430 TAIR:At4g08430 PhylomeDB:Q9SW62
            ArrayExpress:Q9SW62 Genevestigator:Q9SW62 Uniprot:Q9SW62
        Length = 808

 Score = 86 (35.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 21/80 (26%), Positives = 36/80 (45%)

Query:   154 FEDHLNNYL-CGRQHTMSKSMTDVDMLLIPVNLDGAHWVVARVDFRKNKVWIYDSLLTFC 212
             +ED +N    C       K   DVD L   + ++G HWV   +D  K ++ +YDS+ +  
Sbjct:   633 YEDQVNGTAQCDAAKN-KKWFVDVDHLYAYLFVNGNHWVALDIDLPKKRINVYDSIPSLT 691

Query:   213 DDKRYKLKFKLLEVIFPRWL 232
              D    ++   +  + P  L
Sbjct:   692 TDTEMVIQCMFVMTMIPAML 711

 Score = 79 (32.9 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 22/92 (23%), Positives = 44/92 (47%)

Query:    29 LKNLDHNIEKYNLYGFTSGVQAWIYEAIGGLPSTCVVK--TKNKIPRIVQWKPMASSRIN 86
             +K + ++ + Y ++G    +  WIYE++ G+   C  +  T   +P ++ W+  +  R N
Sbjct:   129 VKFVKYDGDSYVIHGCVQALLVWIYESVPGIGEACGFRKTTLTGVP-LLDWRS-SKKRFN 186

Query:    87 FAEVYSFFNDESRI-GDVLQTLEPNSKESSKK 117
             F    +F   E    G V +     ++ESS +
Sbjct:   187 FT---AFIEKEKAAHGQVSRHKRKQNQESSNE 215


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.439    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      249       249   0.00080  114 3  11 22  0.42    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  234 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.40u 0.08s 21.48t   Elapsed:  00:00:01
  Total cpu time:  21.40u 0.08s 21.48t   Elapsed:  00:00:01
  Start:  Sat May 11 07:54:32 2013   End:  Sat May 11 07:54:33 2013

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