Query 036271
Match_columns 301
No_of_seqs 121 out of 1211
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 11:03:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036271.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036271hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.5E-46 3.3E-51 343.9 27.4 264 27-300 23-291 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 4.3E-36 9.3E-41 281.3 27.9 267 28-300 32-302 (517)
3 PLN02971 tryptophan N-hydroxyl 100.0 7.9E-36 1.7E-40 280.8 29.0 267 27-300 54-332 (543)
4 PLN00110 flavonoid 3',5'-hydro 100.0 6.2E-35 1.4E-39 272.3 27.5 274 18-300 18-294 (504)
5 PLN03112 cytochrome P450 famil 100.0 3.2E-34 6.9E-39 268.7 29.5 272 26-300 28-301 (514)
6 PLN02183 ferulate 5-hydroxylas 100.0 1.9E-34 4.2E-39 270.1 27.4 266 25-300 31-309 (516)
7 PLN03234 cytochrome P450 83B1; 100.0 3.5E-34 7.6E-39 267.6 27.9 266 26-300 24-293 (499)
8 PLN02966 cytochrome P450 83A1 100.0 4.8E-33 1E-37 259.9 27.2 289 1-299 1-293 (502)
9 PLN00168 Cytochrome P450; Prov 100.0 2.4E-32 5.2E-37 256.2 28.1 267 26-300 31-311 (519)
10 PLN02655 ent-kaurene oxidase 100.0 2.9E-32 6.2E-37 252.5 23.7 260 32-300 1-267 (466)
11 PLN03018 homomethionine N-hydr 100.0 6E-31 1.3E-35 246.6 28.5 270 28-300 38-319 (534)
12 PLN02290 cytokinin trans-hydro 100.0 2.6E-31 5.6E-36 249.2 23.1 257 29-299 41-320 (516)
13 PLN02394 trans-cinnamate 4-mon 100.0 5.4E-30 1.2E-34 239.6 27.0 264 26-299 26-297 (503)
14 PTZ00404 cytochrome P450; Prov 100.0 4.9E-30 1.1E-34 238.7 26.1 246 26-281 25-272 (482)
15 KOG0158 Cytochrome P450 CYP3/C 100.0 2.3E-30 5E-35 234.9 21.4 254 30-301 31-300 (499)
16 PLN02500 cytochrome P450 90B1 100.0 5.4E-30 1.2E-34 238.7 21.9 245 26-300 34-284 (490)
17 PF00067 p450: Cytochrome P450 100.0 2.9E-29 6.2E-34 230.6 14.4 258 32-300 1-267 (463)
18 KOG0157 Cytochrome P450 CYP4/C 100.0 8.5E-28 1.9E-32 223.3 20.2 256 28-300 33-296 (497)
19 PLN02774 brassinosteroid-6-oxi 100.0 1.6E-27 3.6E-32 220.5 21.1 260 8-300 8-269 (463)
20 PLN02169 fatty acid (omega-1)- 100.0 3E-27 6.4E-32 220.5 22.5 256 32-300 33-306 (500)
21 PLN02196 abscisic acid 8'-hydr 100.0 3.2E-27 6.9E-32 218.6 22.4 236 28-300 33-269 (463)
22 PLN02987 Cytochrome P450, fami 100.0 1.1E-26 2.4E-31 215.0 22.3 241 26-300 26-272 (472)
23 PLN02302 ent-kaurenoic acid ox 100.0 2.3E-26 5.1E-31 214.5 24.6 247 26-300 38-292 (490)
24 PLN03195 fatty acid omega-hydr 99.9 4.5E-26 9.8E-31 213.7 21.7 255 31-300 31-297 (516)
25 PLN03141 3-epi-6-deoxocathaste 99.9 1.8E-26 3.9E-31 213.0 18.5 245 27-300 4-256 (452)
26 PLN02936 epsilon-ring hydroxyl 99.9 2.8E-24 6.1E-29 200.2 19.7 251 30-300 12-283 (489)
27 PLN02738 carotene beta-ring hy 99.9 6.4E-23 1.4E-27 195.2 21.7 245 40-299 141-395 (633)
28 PLN02426 cytochrome P450, fami 99.8 1.5E-18 3.2E-23 162.1 22.4 227 37-280 48-286 (502)
29 PLN02648 allene oxide synthase 99.8 1.7E-19 3.7E-24 166.7 10.1 157 30-191 17-194 (480)
30 KOG0159 Cytochrome P450 CYP11/ 99.8 1.2E-17 2.6E-22 149.8 19.5 225 31-262 51-289 (519)
31 KOG0684 Cytochrome P450 [Secon 99.8 6E-17 1.3E-21 142.3 17.1 244 30-299 31-277 (486)
32 COG2124 CypX Cytochrome P450 [ 99.6 4.2E-14 9.1E-19 128.9 17.2 231 33-300 5-241 (411)
33 KOG0114 Predicted RNA-binding 79.9 7 0.00015 28.1 5.4 59 29-90 11-76 (124)
34 PF13893 RRM_5: RNA recognitio 71.7 11 0.00024 23.3 4.4 43 56-98 2-49 (56)
35 PF13625 Helicase_C_3: Helicas 60.5 18 0.00039 27.1 4.4 38 52-91 77-114 (129)
36 KOG3653 Transforming growth fa 59.8 28 0.00061 32.3 6.1 45 52-96 212-257 (534)
37 TIGR01661 ELAV_HUD_SF ELAV/HuD 55.9 30 0.00065 30.7 5.8 58 40-99 273-340 (352)
38 COG1927 Mtd Coenzyme F420-depe 54.8 87 0.0019 25.7 7.4 105 53-160 50-166 (277)
39 PF00076 RRM_1: RNA recognitio 53.6 41 0.00088 21.3 4.8 55 40-96 2-65 (70)
40 PLN03120 nucleic acid binding 53.5 51 0.0011 28.1 6.3 59 40-100 8-72 (260)
41 PRK00994 F420-dependent methyl 52.8 88 0.0019 26.3 7.3 108 54-166 51-170 (277)
42 smart00362 RRM_2 RNA recogniti 46.6 69 0.0015 19.8 5.8 39 52-90 13-58 (72)
43 PF05545 FixQ: Cbb3-type cytoc 42.9 42 0.0009 20.3 3.2 18 7-24 13-30 (49)
44 PLN03134 glycine-rich RNA-bind 42.8 76 0.0016 24.3 5.4 58 40-99 38-105 (144)
45 PF05393 Hum_adeno_E3A: Human 41.5 41 0.00088 23.3 3.2 8 35-42 64-71 (94)
46 cd01646 RT_Bac_retron_I RT_Bac 38.1 49 0.0011 25.6 3.8 56 28-89 51-107 (158)
47 PF14259 RRM_6: RNA recognitio 37.9 50 0.0011 21.1 3.3 50 41-92 3-60 (70)
48 PF15206 FAM209: FAM209 family 32.7 30 0.00066 26.2 1.6 14 28-41 64-77 (150)
49 smart00360 RRM RNA recognition 30.0 1.3E+02 0.0029 18.2 5.0 39 52-90 10-57 (71)
50 PF15330 SIT: SHP2-interacting 29.6 1.2E+02 0.0025 22.1 4.2 11 37-47 45-55 (107)
51 PF13260 DUF4051: Protein of u 27.3 1E+02 0.0023 18.6 2.9 14 5-18 3-16 (54)
52 cd00590 RRM RRM (RNA recogniti 26.3 1.6E+02 0.0035 18.0 5.9 40 52-91 13-60 (74)
53 cd01324 cbb3_Oxidase_CcoQ Cyto 25.4 1.2E+02 0.0026 18.4 3.1 7 18-24 25-31 (48)
54 PF01993 MTD: methylene-5,6,7, 24.1 1.3E+02 0.0028 25.4 4.0 104 54-160 50-165 (276)
55 TIGR01628 PABP-1234 polyadenyl 22.0 2.2E+02 0.0048 27.2 5.9 58 39-98 288-354 (562)
56 KOG4241 Mitochondrial ribosoma 20.7 1.2E+02 0.0027 24.8 3.2 30 61-90 135-164 (245)
57 TIGR01642 U2AF_lg U2 snRNP aux 20.2 1.8E+02 0.004 27.2 4.9 46 54-99 435-493 (509)
58 PLN02196 abscisic acid 8'-hydr 20.1 1.6E+02 0.0034 27.4 4.4 7 274-280 328-334 (463)
59 PF09061 Stirrup: Stirrup; In 20.1 2.2E+02 0.0048 18.5 3.6 27 52-79 9-35 (79)
60 KOG3054 Uncharacterized conser 20.0 1.8E+02 0.0039 24.6 4.0 19 4-22 3-21 (299)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-46 Score=343.86 Aligned_cols=264 Identities=38% Similarity=0.662 Sum_probs=226.2
Q ss_pred ccCCCCCCCCCCccccccccCCCC-chHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCC-CCcc
Q 036271 27 RALKFPAGPKPWPIIGNLNLIGPL-PHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQ-TAAG 104 (301)
Q Consensus 27 ~~~~~ppgP~~~PllGnl~~~~~~-~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~-~~~~ 104 (301)
+..++||||+++|+|||++++... +|..+.+|+++|||||++|+|+.|+|||||+++|+|+|++++..|++||. ....
T Consensus 23 ~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~ 102 (489)
T KOG0156|consen 23 KRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL 102 (489)
T ss_pred CCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence 347899999999999999999655 99999999999999999999999999999999999999999999999997 2344
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-CCceehHHHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-GKPVVLKEHLSRVTLSIISRT 183 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-g~~vd~~~~~~~~t~~ii~~~ 183 (301)
+.+.+++.++++++||+.||++||+++..+|+.+.++++.+...+|++++++.+.+.. +++||+.+.+..+++|||+++
T Consensus 103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~~ 182 (489)
T KOG0156|consen 103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICRM 182 (489)
T ss_pred HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHHH
Confidence 6677677899999999999999999999999999999999999999999999999722 379999999999999999999
Q ss_pred HhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcc-ccccccc-cchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036271 184 VLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIP-WLDFLDL-QGYVKRMKALKKKFDRFHDHVFDEHKAN 261 (301)
Q Consensus 184 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~~~~ 261 (301)
+||.+++.+++++ . .++.+++.+.+...+.+++.+++| ++++++. ++..++.+....++++++.++|++|+++
T Consensus 183 ~fG~rf~~~~~~~-~----~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~ 257 (489)
T KOG0156|consen 183 LFGRRFEEEDEEE-F----LELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREK 257 (489)
T ss_pred HhCCccccCCchH-H----HHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999998764333 2 568899999999988888999999 6787752 3567777777778999999999999886
Q ss_pred hcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 262 RKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 262 ~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.+ + ++ .+||+|+||+...+++.+. +|+++|.++|
T Consensus 258 ~~-~-~~--~~D~vD~lL~~~~~~~~~~-~t~~~i~~~~ 291 (489)
T KOG0156|consen 258 IG-D-EE--GRDFVDALLKLMKEEKAEG-LTDDHLKALI 291 (489)
T ss_pred hc-c-CC--CCcHHHHHHHhhcccccCC-CCHHHHHHHH
Confidence 52 2 22 4899999999544333232 9999999876
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00 E-value=4.3e-36 Score=281.30 Aligned_cols=267 Identities=37% Similarity=0.699 Sum_probs=205.6
Q ss_pred cCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccce
Q 036271 28 ALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHT 107 (301)
Q Consensus 28 ~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~~ 107 (301)
..++||||+++|++||++++...++..+.+|.++||+||++++|+.++||++||++++++|+++...|++|+.......+
T Consensus 32 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~ 111 (517)
T PLN02687 32 KRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM 111 (517)
T ss_pred CCCCCccCCCCCccccHHhcCCchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence 34689999999999999888656889999999999999999999999999999999999999988889999765443333
Q ss_pred eccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-CCceehHHHHHHHHHHHHHHHHhC
Q 036271 108 TYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-GKPVVLKEHLSRVTLSIISRTVLG 186 (301)
Q Consensus 108 ~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-g~~vd~~~~~~~~t~~ii~~~~fG 186 (301)
...+.+++++.+|+.|+++||++++++|+.+++++|.+.++++++++++.|.+.. ++++|+.+.++.+++|+|+.++||
T Consensus 112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 191 (517)
T PLN02687 112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALGRAMVG 191 (517)
T ss_pred ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHHHHhC
Confidence 3333467888889999999999965789999999999999999999999997644 678999999999999999999999
Q ss_pred ccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 036271 187 KKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNL 266 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~ 266 (301)
.++...+..+ . .+.+.+.+..++...+.....+++|+++|++..+..++..+..+.+++++.++|+++++.....+
T Consensus 192 ~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~ 267 (517)
T PLN02687 192 RRVFAGDGDE-K---AREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNGIIEEHKAAGQTGS 267 (517)
T ss_pred ccccccCCcc-h---HHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Confidence 9875322111 0 14566666666655443333467787776644333455666778888999999998876542111
Q ss_pred CCCCCCCHHHHHhhcccCC---CCcccCcccchheec
Q 036271 267 KDFVPKDMVDLLLQMADDP---NLDVKLNYDSVRGFT 300 (301)
Q Consensus 267 ~~~~~~d~ld~lL~~~~d~---~~~~~lt~~~i~~~~ 300 (301)
....|+++.||+...++ .++..+|+++|.+.+
T Consensus 268 --~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~ 302 (517)
T PLN02687 268 --EEHKDLLSTLLALKREQQADGEGGRITDTEIKALL 302 (517)
T ss_pred --cccccHHHHHHHhhccccccccccCCCHHHHHHHH
Confidence 12679999999843221 123469999887654
No 3
>PLN02971 tryptophan N-hydroxylase
Probab=100.00 E-value=7.9e-36 Score=280.75 Aligned_cols=267 Identities=25% Similarity=0.394 Sum_probs=196.4
Q ss_pred ccCCCCCCCCCCccccccccC-CCC-chHHHHHHHHhhC-CceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCc
Q 036271 27 RALKFPAGPKPWPIIGNLNLI-GPL-PHQSLHKLSQKYG-QIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAA 103 (301)
Q Consensus 27 ~~~~~ppgP~~~PllGnl~~~-~~~-~~~~~~~~~~~yG-~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~ 103 (301)
+..++||||+++|++||++++ ... .+..+.+|+++|| +||++|+|+.|+|||+||++++|+|+++++.|++||....
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~ 133 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA 133 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence 345789999999999999887 333 3677899999999 8999999999999999999999999999999999986444
Q ss_pred ccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHH
Q 036271 104 GKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIIS 181 (301)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~ 181 (301)
...++.+..+++++.+|+.||++||++++++|++..++.+.++++++++.+++.+.+.+ |+++|+.+.++++|+|||+
T Consensus 134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~ 213 (543)
T PLN02971 134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK 213 (543)
T ss_pred hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence 33333333456888999999999999976778887778899999999999999887643 5789999999999999999
Q ss_pred HHHhCccccCCC----ccchhhhhHHHHHHHHHHHHHhh---cccccchhccccccccccchHHHHHHHHHHHHHHHHHH
Q 036271 182 RTVLGKKYFSES----KAEDSIVTLEEFQEMLDELFLLN---GVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHV 254 (301)
Q Consensus 182 ~~~fG~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (301)
+++||.++...+ +.. . .+..+.+.+.+... ....+.+++|+++++++.+..+..++..+.+++++.++
T Consensus 214 ~~~fG~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (543)
T PLN02971 214 RLMFGTRTFSEKTEPDGGP-T----LEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPI 288 (543)
T ss_pred HHHhCCcccccccccccch-h----HHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999874221 011 0 12223333333221 11234567887776643344455566677788999999
Q ss_pred HHHHHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 255 FDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 255 I~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
|+++++..++ +....+.||+|.||+. .++++...+|+++|.+.|
T Consensus 289 i~~~~~~~~~-~~~~~~~d~l~~ll~~-~~~~~~~~ls~~~i~~~~ 332 (543)
T PLN02971 289 IDERIKMWRE-GKRTQIEDFLDIFISI-KDEAGQPLLTADEIKPTI 332 (543)
T ss_pred HHHHHHHHhc-cCCCCCcCHHHHHHhh-hcccCCCCCCHHHHHHhH
Confidence 9988764321 1111257999999984 332222249999998765
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00 E-value=6.2e-35 Score=272.35 Aligned_cols=274 Identities=34% Similarity=0.648 Sum_probs=207.6
Q ss_pred HHHHhhhh-cccCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccc
Q 036271 18 LAFLSTFR-RRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFA 96 (301)
Q Consensus 18 ~~~~~~~~-~~~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~ 96 (301)
.+++.++. .+..++||||+++|++||++++...++..+.+|.++||+||++++|+.++|+++||++++++|++++..|+
T Consensus 18 ~~~~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~ 97 (504)
T PLN00110 18 RFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFS 97 (504)
T ss_pred HHHHHHHhhcccCCCcccCCCCCeeechhhcCCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhc
Confidence 34444433 45567899999999999998876567889999999999999999999999999999999999999888999
Q ss_pred cCCCCCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHH
Q 036271 97 SRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSR 174 (301)
Q Consensus 97 ~R~~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~ 174 (301)
+|+..........+..+++++.+|+.|+++||++++++|++++++.|.+.+.+++..+++.+.+.. |+++|+.+.+..
T Consensus 98 ~r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~ 177 (504)
T PLN00110 98 NRPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTF 177 (504)
T ss_pred CCCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHH
Confidence 998644332222333467888899999999999975689999999999999999999999997643 778999999999
Q ss_pred HHHHHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHH
Q 036271 175 VTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHV 254 (301)
Q Consensus 175 ~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (301)
+++|||++++||.++......+ . +++.+.+.+.+...+...+.+++|+++|++..+..++.++..+.+.+++.++
T Consensus 178 ~~~~vi~~~~fg~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 252 (504)
T PLN00110 178 SMANMIGQVILSRRVFETKGSE-S----NEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRM 252 (504)
T ss_pred HHHHHHHHHHhCCcccccCchh-H----HHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999872211111 1 5566777666654433334567787776544344455666777888899999
Q ss_pred HHHHHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 255 FDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 255 I~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
|+++++... ... ...|+++.||+. .+.+++..+|+++|.+.+
T Consensus 253 i~~~~~~~~-~~~--~~~d~l~~ll~~-~~~~~~~~l~~~~i~~~~ 294 (504)
T PLN00110 253 IEEHTASAH-ERK--GNPDFLDVVMAN-QENSTGEKLTLTNIKALL 294 (504)
T ss_pred HHHHHhhcc-ccc--cCCChhhHHhhc-ccccCCCCCCHHHHHHHH
Confidence 988876432 111 256999999973 322234469999887654
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=268.71 Aligned_cols=272 Identities=37% Similarity=0.703 Sum_probs=203.3
Q ss_pred cccCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 036271 26 RRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGK 105 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~ 105 (301)
++..+.||||+++|++||+.++...++..+.+|.++||++|++++|+.++|+++||+++++++.+++..|++|+......
T Consensus 28 ~~~~~~ppgp~~~pl~G~~~~~~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~~~~ 107 (514)
T PLN03112 28 RKSLRLPPGPPRWPIVGNLLQLGPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTLAAV 107 (514)
T ss_pred cCCCCCccCCCCCCeeeeHHhcCCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcccce
Confidence 44457899999999999998876668889999999999999999999999999999999999999888899887543222
Q ss_pred ceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHHH
Q 036271 106 HTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISRT 183 (301)
Q Consensus 106 ~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~~ 183 (301)
....+..+++++.+|+.|+.+||++.+++|+.++++.+.+.+.++++.+++.+.+.. |+++|+.+.++++++++++++
T Consensus 108 ~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~ 187 (514)
T PLN03112 108 HLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRM 187 (514)
T ss_pred eeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHHHHHHHHHH
Confidence 222333456677889999999999766789999999999999999999999887643 678999999999999999999
Q ss_pred HhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 036271 184 VLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRK 263 (301)
Q Consensus 184 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~ 263 (301)
+||.++....... . ....++.+.+..++...+.....+++|++++++..+..++.++..+.+.+++.++|+++++...
T Consensus 188 ~fG~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 265 (514)
T PLN03112 188 LLGKQYFGAESAG-P-KEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEHRRARS 265 (514)
T ss_pred HcCCccccccccc-h-HHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999874322100 0 0014566666666554333334466787766533334456667788888899999998876532
Q ss_pred CCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 264 GNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 264 ~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.........|+++.|++ +.+++++..+++++|.+.+
T Consensus 266 ~~~~~~~~~d~l~~ll~-~~~~~~~~~l~~~~i~~~~ 301 (514)
T PLN03112 266 GKLPGGKDMDFVDVLLS-LPGENGKEHMDDVEIKALM 301 (514)
T ss_pred ccccCCccchHHHHHHH-hhccccccCCCHHHHHHHH
Confidence 11111225699999998 3333223358999987654
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=100.00 E-value=1.9e-34 Score=270.10 Aligned_cols=266 Identities=36% Similarity=0.650 Sum_probs=198.5
Q ss_pred hcccCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 25 RRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 25 ~~~~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
.++..++||||+++|++||++++...++..+.+|.++||++|++++|+.++|+++||++++++|.+++..|++|+.....
T Consensus 31 ~~~~~~~ppgp~~~Pl~G~l~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~ 110 (516)
T PLN02183 31 LRRRLPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAI 110 (516)
T ss_pred ccCCCCCCcCCCCCCeeccHHhcCCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccch
Confidence 34556789999999999999887555677899999999999999999999999999999999999988889988754333
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTV 184 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~ii~~~~ 184 (301)
.....+..+++++.+|+.|+++||++.+++|+.++++.|.+++ ++++.+++.+.+..|+++|+.+.+.++++||+++++
T Consensus 111 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~vi~~~~ 189 (516)
T PLN02183 111 SYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSNIGKPVNIGELIFTLTRNITYRAA 189 (516)
T ss_pred hccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHhHh
Confidence 3232233467888899999999999656899999999998864 689999999975347899999999999999999999
Q ss_pred hCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 036271 185 LGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKG 264 (301)
Q Consensus 185 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~ 264 (301)
||.+++..+ +++.+.+..++.........+++|++++++.....++..+..+.+++++.++|+++++...+
T Consensus 190 fG~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 260 (516)
T PLN02183 190 FGSSSNEGQ---------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKRKN 260 (516)
T ss_pred hcCcccchH---------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998774321 44666666555544433445677877665322334556667788888999999888654321
Q ss_pred C-C---CCCCCCCHHHHHhhcccCC---------CCcccCcccchheec
Q 036271 265 N-L---KDFVPKDMVDLLLQMADDP---------NLDVKLNYDSVRGFT 300 (301)
Q Consensus 265 ~-~---~~~~~~d~ld~lL~~~~d~---------~~~~~lt~~~i~~~~ 300 (301)
. + ++...+|+++.||+...++ .++..+|+++|++.+
T Consensus 261 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 309 (516)
T PLN02183 261 QNADNDSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAII 309 (516)
T ss_pred cccccccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHH
Confidence 1 0 1112569999999843211 012358999887643
No 7
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00 E-value=3.5e-34 Score=267.55 Aligned_cols=266 Identities=32% Similarity=0.565 Sum_probs=199.4
Q ss_pred cccCCCCCCCCCCccccccccCC-CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 26 RRALKFPAGPKPWPIIGNLNLIG-PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~~-~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
++..+.||||+++|++||++++. ..++..+.+|+++||++|++++|+.++|+++|||++++++.+++..|.+|+.....
T Consensus 24 ~~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~ 103 (499)
T PLN03234 24 KKSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ 103 (499)
T ss_pred CCCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence 45567899999999999998874 36788899999999999999999999999999999999999988889988753322
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISR 182 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~ 182 (301)
......+..+.+..+|+.|+++||.++.++|+++++++|.+.++++++++++.|.+.+ |+++|+.+.+.++|+|++++
T Consensus 104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~ 183 (499)
T PLN03234 104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR 183 (499)
T ss_pred hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence 2222222334456678999999998656899999999999999999999999997654 67899999999999999999
Q ss_pred HHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcccccccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036271 183 TVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLD-LQGYVKRMKALKKKFDRFHDHVFDEHKAN 261 (301)
Q Consensus 183 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~~~~~~~~~~~~~~~~~~~I~~~~~~ 261 (301)
++||.+++..+ .+ . .++.+.+.+.+...+.....+.+|++.+++ +.+..++..+..+.++.++.++|+++++.
T Consensus 184 ~~fG~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 257 (499)
T PLN03234 184 QAFGKRYNEYG-TE-M----KRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLDP 257 (499)
T ss_pred HHhCCcccccc-hh-H----HHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999886443 12 1 456566665554433333345566554332 12334566778889999999999887654
Q ss_pred hcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 262 RKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 262 ~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.. ++. .++|+++.|++...++.++..+|+++|++.+
T Consensus 258 ~~-~~~--~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~ 293 (499)
T PLN03234 258 NR-PKQ--ETESFIDLLMQIYKDQPFSIKFTHENVKAMI 293 (499)
T ss_pred cc-cCC--CcccHHHHHHHHhhccCcCCCCCHHHHHHHH
Confidence 22 111 2679999999843222223369999998754
No 8
>PLN02966 cytochrome P450 83A1
Probab=100.00 E-value=4.8e-33 Score=259.90 Aligned_cols=289 Identities=28% Similarity=0.496 Sum_probs=202.5
Q ss_pred ChhhhHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCCCccccccccC-CCCchHHHHHHHHhhCCceEEecCCccEEEec
Q 036271 1 MEAAYSWVVIALTLLAALAFLSTFRRRALKFPAGPKPWPIIGNLNLI-GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAA 79 (301)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ppgP~~~PllGnl~~~-~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~ 79 (301)
|||-+.+++.+++.++.+.+.+. .++..++||||+++|++||+.++ ...++..+.+|.++||++|++++|+.++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~ 79 (502)
T PLN02966 1 MEDIIIGVVALAAVLLFFLYQKP-KTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVIS 79 (502)
T ss_pred CCceEEeHHHHHHHHHHHHHhcc-ccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEEC
Confidence 67766666543333333332232 23445789999999999999887 44678899999999999999999999999999
Q ss_pred CHHHHHHHHHhCCcccccCCCCCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHH
Q 036271 80 SAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLY 159 (301)
Q Consensus 80 dp~~~keil~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~ 159 (301)
||+.+++++.+++..|.+|+..........+..++.++.+|+.|+.+||++.+++|+++++++|.+.+.++++++++.|.
T Consensus 80 ~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~ 159 (502)
T PLN02966 80 SAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKIN 159 (502)
T ss_pred CHHHHHHHHHhCcccccCCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888776533322222333345566779999999999556899999999999999999999999997
Q ss_pred hhc--CCceehHHHHHHHHHHHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcccccccc-ccch
Q 036271 160 ALS--GKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLD-LQGY 236 (301)
Q Consensus 160 ~~~--g~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~-~~~~ 236 (301)
+.+ |+++|+.+.++++|+|+|++++||.+++..+ .+ . .++.+.+.......+...+.+++|++++++ +.++
T Consensus 160 ~~~~~~~~vdl~~~~~~~t~dvi~~~~fG~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 233 (502)
T PLN02966 160 KAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDG-EE-M----KRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGL 233 (502)
T ss_pred HhccCCCceeHHHHHHHHHHHHHHHHHhCCccCccc-hH-H----HHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccH
Confidence 643 5689999999999999999999999886433 11 1 445555555444433333345566543321 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchhee
Q 036271 237 VKRMKALKKKFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGF 299 (301)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~ 299 (301)
.+......+...+++.++|+++.+... ... ...|+++.|+++..++..+..+++++|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~--~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~ 293 (502)
T PLN02966 234 TAYMKECFERQDTYIQEVVNETLDPKR-VKP--ETESMIDLLMEIYKEQPFASEFTVDNVKAV 293 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-ccc--ccccHHHHHHHHHhccCcCCCCCHHHHHHH
Confidence 233344555667777788777654321 111 256999999984332212335899988764
No 9
>PLN00168 Cytochrome P450; Provisional
Probab=100.00 E-value=2.4e-32 Score=256.16 Aligned_cols=267 Identities=18% Similarity=0.301 Sum_probs=190.6
Q ss_pred cccCCCCCCCCCCccccccccCC---CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCC
Q 036271 26 RRALKFPAGPKPWPIIGNLNLIG---PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTA 102 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~~---~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~ 102 (301)
++..++||||+++|++||+.++. ..++..+.+|+++||++|++++|+.|+|+++||++++++|++++..|++|+...
T Consensus 31 ~~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~ 110 (519)
T PLN00168 31 KKGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA 110 (519)
T ss_pred CCCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence 44557899999999999987652 346788999999999999999999999999999999999999999999998644
Q ss_pred cccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHH
Q 036271 103 AGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSII 180 (301)
Q Consensus 103 ~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii 180 (301)
....++.+...+.+.++|+.|+++||.+.+++|+.+++++|.+.|.++++.+++.|.+.+ ++++|+.+.++.++.++|
T Consensus 111 ~~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~ii 190 (519)
T PLN00168 111 SSRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCLL 190 (519)
T ss_pred chhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 333333221122334789999999985557999999999999999999999999998754 457899999999999999
Q ss_pred HHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhh-cccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 036271 181 SRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLN-GVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHK 259 (301)
Q Consensus 181 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~ 259 (301)
+.++||.+++... . +.+......+.... ....+.+++|.+.+....+..++..+..+.+.+++.++|++++
T Consensus 191 ~~~~fG~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 262 (519)
T PLN00168 191 VLMCFGERLDEPA----V----RAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDARR 262 (519)
T ss_pred HHHHcCCCcChhh----H----HHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999885221 1 23333333332221 1223345667543321112223455667788899999999887
Q ss_pred hhhcC---CCCC-----CCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 260 ANRKG---NLKD-----FVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 260 ~~~~~---~~~~-----~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+.... .+.+ ....|++|.||+...+++++..+|+++|.+.|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~ 311 (519)
T PLN00168 263 EYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLC 311 (519)
T ss_pred HHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHH
Confidence 64210 0100 01469999999843222223469999998754
No 10
>PLN02655 ent-kaurene oxidase
Probab=100.00 E-value=2.9e-32 Score=252.46 Aligned_cols=260 Identities=19% Similarity=0.272 Sum_probs=190.7
Q ss_pred CCCCCCCccccccccC-CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccceecc
Q 036271 32 PAGPKPWPIIGNLNLI-GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYN 110 (301)
Q Consensus 32 ppgP~~~PllGnl~~~-~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~~~~~ 110 (301)
||||+++|++||++++ .+.++..+.+|+++||+||++++|+.++|+|+||+++|++|+++...|++|+.......+.++
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~~~ 80 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLTRD 80 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHhcC
Confidence 7999999999999888 455889999999999999999999999999999999999999999999998754333323322
Q ss_pred CcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc----CCceehHHHHHHHHHHHHHHHHhC
Q 036271 111 YLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS----GKPVVLKEHLSRVTLSIISRTVLG 186 (301)
Q Consensus 111 ~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~----g~~vd~~~~~~~~t~~ii~~~~fG 186 (301)
+..++..++|+.|+++||.+.+++|+..+++.+.++++++++.+++.+.+.+ +++||+.+.++++|+|++++++||
T Consensus 81 ~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG 160 (466)
T PLN02655 81 KSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQALG 160 (466)
T ss_pred CCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHHHhc
Confidence 2234455679999999998877888888888999999999999999987542 578999999999999999999999
Q ss_pred ccccCCCccchhhh--hHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 036271 187 KKYFSESKAEDSIV--TLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKG 264 (301)
Q Consensus 187 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~ 264 (301)
.+++..+..+.... ..+.+.+.+...+.......+.+++|+++|+|...+.+...+....+.+++.++|++++++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 239 (466)
T PLN02655 161 EDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKRIA- 239 (466)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence 98764321110000 002233344444444333334567888887764334444444455567888899988876532
Q ss_pred CCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 265 NLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 265 ~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.+.+ +.|+++.||+. . ..+|+++|.+.+
T Consensus 240 ~~~~--~~d~l~~ll~~-~-----~~ls~~~i~~~~ 267 (466)
T PLN02655 240 RGEE--RDCYLDFLLSE-A-----THLTDEQLMMLV 267 (466)
T ss_pred CCCC--cccHHHHHHhc-c-----CCCCHHHHHHHH
Confidence 1222 56999999983 2 248888887653
No 11
>PLN03018 homomethionine N-hydroxylase
Probab=100.00 E-value=6e-31 Score=246.61 Aligned_cols=270 Identities=19% Similarity=0.309 Sum_probs=182.3
Q ss_pred cCCCCCCCCCCccccccccC-CCCch-HHHHHHHHhh-CCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 28 ALKFPAGPKPWPIIGNLNLI-GPLPH-QSLHKLSQKY-GQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 28 ~~~~ppgP~~~PllGnl~~~-~~~~~-~~~~~~~~~y-G~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
..++||||+++|++||++++ ...+. ..+.++.++| |+||++++|+.|+|+|+||++++|+|+++++.|++|+.....
T Consensus 38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~ 117 (534)
T PLN03018 38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIM 117 (534)
T ss_pred CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhh
Confidence 34589999999999999886 33333 3455666766 799999999999999999999999999999899999864443
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISR 182 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~ 182 (301)
..+..++.+++++++|+.||++||++++.+++.+..+.+.++++.+++++++.+.+.. +.++|+.+.++++++|||++
T Consensus 118 ~~l~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~~ 197 (534)
T PLN03018 118 ETIGDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVTMR 197 (534)
T ss_pred hhhccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHHHH
Confidence 3333333357777789999999999974444566566677777788999999998643 56899999999999999999
Q ss_pred HHhCccccCCCc---cchhhhhHHHHHHHHH---HHHHhhcccccchhcc-ccccccccchHHHHHHHHHHHHHHHHHHH
Q 036271 183 TVLGKKYFSESK---AEDSIVTLEEFQEMLD---ELFLLNGVLNIGDWIP-WLDFLDLQGYVKRMKALKKKFDRFHDHVF 255 (301)
Q Consensus 183 ~~fG~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~I 255 (301)
++||.++...+. .+ . .....+...+. +...........+++| ++++++..+..++.....+.+++++.++|
T Consensus 198 ~~fG~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 275 (534)
T PLN03018 198 MLFGRRHVTKENVFSDD-G-RLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPII 275 (534)
T ss_pred HHhCCcccccccccccc-c-cchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999998743210 00 0 00011222222 2221111122234555 55533222334445555677889999999
Q ss_pred HHHHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 256 DEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 256 ~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+++++..++.+....+.|+++.||+ ..+++++..+|+++|...+
T Consensus 276 ~~~~~~~~~~~~~~~~~d~l~~ll~-~~~~~~~~~ls~~~i~~~~ 319 (534)
T PLN03018 276 DERVELWREKGGKAAVEDWLDTFIT-LKDQNGKYLVTPDEIKAQC 319 (534)
T ss_pred HHHHHHhhhccCCCCcccHHHHHHH-hhcccCCCCCCHHHHHHHH
Confidence 9887643211111125799999998 3332222249999987654
No 12
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00 E-value=2.6e-31 Score=249.22 Aligned_cols=257 Identities=20% Similarity=0.249 Sum_probs=179.8
Q ss_pred CCCCCCCCCCccccccccCCC-------------------CchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHH
Q 036271 29 LKFPAGPKPWPIIGNLNLIGP-------------------LPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQ 89 (301)
Q Consensus 29 ~~~ppgP~~~PllGnl~~~~~-------------------~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~ 89 (301)
.+.||||+++|++||++++.. .....+.+|+++||++|++|+|+.++||++||++++++|+
T Consensus 41 ~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~il~ 120 (516)
T PLN02290 41 RQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKELLT 120 (516)
T ss_pred HcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHHHh
Confidence 456899999999999977621 1223578999999999999999999999999999999999
Q ss_pred hCCcccccCCCCCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--C-Cce
Q 036271 90 THDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--G-KPV 166 (301)
Q Consensus 90 ~~~~~f~~R~~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g-~~v 166 (301)
++ ..+.+|+...........+ +++++++|+.|+++||+++ +.|++++++.+.+.+.++++.+++.|.+.+ + .++
T Consensus 121 ~~-~~~~~r~~~~~~~~~~~~g-~~l~~~~g~~Wk~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~v 197 (516)
T PLN02290 121 KY-NTVTGKSWLQQQGTKHFIG-RGLLMANGADWYHQRHIAA-PAFMGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEV 197 (516)
T ss_pred cC-CCCCCCcchhhhHHHHHhc-CCccccCchHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 87 4466676322111100111 2455678999999999985 899999999999999999999999998753 3 589
Q ss_pred ehHHHHHHHHHHHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHH
Q 036271 167 VLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKK 246 (301)
Q Consensus 167 d~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~ 246 (301)
|+.+.++++++|+|++++||.+++..+ ++.+.+..+............+|+++++|. +..++.++..+.
T Consensus 198 d~~~~~~~~~~~vi~~~~fG~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~-~~~~~~~~~~~~ 266 (516)
T PLN02290 198 EIGEYMTRLTADIISRTEFDSSYEKGK----------QIFHLLTVLQRLCAQATRHLCFPGSRFFPS-KYNREIKSLKGE 266 (516)
T ss_pred EhHHHHHHHHHHHHHHHHcCCccccch----------HHHHHHHHHHHHHHHhhhhhcCchhhhCCC-hhHHHHHHHHHH
Confidence 999999999999999999999875322 222223322222111111123455555542 334456667778
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCCCCCHHHHHhhcccCC-CCcccCcccchhee
Q 036271 247 FDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDP-NLDVKLNYDSVRGF 299 (301)
Q Consensus 247 ~~~~~~~~I~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~-~~~~~lt~~~i~~~ 299 (301)
+++++.++|+++++..+.+......+|+++.||+...+. .++..+++++|.+.
T Consensus 267 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~ 320 (516)
T PLN02290 267 VERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDE 320 (516)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHhccccCCCCCCCCHHHHHHH
Confidence 899999999988765431111112579999999842221 12335888887654
No 13
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.97 E-value=5.4e-30 Score=239.58 Aligned_cols=264 Identities=28% Similarity=0.438 Sum_probs=182.1
Q ss_pred cccCCCCCCCCCCccccccccCCC-CchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 26 RRALKFPAGPKPWPIIGNLNLIGP-LPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~~~-~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
.++.+.||||+++|++||+.++.. .++..+.+|.++||+||++++|+.++|+++||+.+++++.++++.|.+|+.....
T Consensus 26 ~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~ 105 (503)
T PLN02394 26 GKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF 105 (503)
T ss_pred cCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence 344578999999999999988743 3578899999999999999999999999999999999999888889888754333
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc---CCceehHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS---GKPVVLKEHLSRVTLSIIS 181 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~---g~~vd~~~~~~~~t~~ii~ 181 (301)
..+...+.+++++.+|+.|+++||.+..++|+++.+++|.+.++++++++++.|.+.. ++.+|+.+.++++++|+++
T Consensus 106 ~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dvi~ 185 (503)
T PLN02394 106 DIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNIMY 185 (503)
T ss_pred hHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHHHH
Confidence 3332223467788889999999999866899999999999999999999999997643 3569999999999999999
Q ss_pred HHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcc--cccchhccccccccccchHHHHHHHHHH-HHHHHHHHHHHH
Q 036271 182 RTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGV--LNIGDWIPWLDFLDLQGYVKRMKALKKK-FDRFHDHVFDEH 258 (301)
Q Consensus 182 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~-~~~~~~~~I~~~ 258 (301)
+++||.+++..+... . ..+.....+....... ..+.+++|++.+. ...+.+........ .+.+...+|+++
T Consensus 186 ~~~fG~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 259 (503)
T PLN02394 186 RMMFDRRFESEDDPL-F----LKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYFVDER 259 (503)
T ss_pred HHHhCCCcccccchh-H----HHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999986433211 1 3333333333332221 1223445544322 11222222222222 222334567777
Q ss_pred HhhhcCC-CCCCCCCCHHHHHhhcccCCCCcccCcccchhee
Q 036271 259 KANRKGN-LKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGF 299 (301)
Q Consensus 259 ~~~~~~~-~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~ 299 (301)
++..... .+....+|++|.|++. .++ ..+|+++|...
T Consensus 260 ~~~~~~~~~~~~~~~d~l~~ll~~-~~~---~~l~~~~i~~~ 297 (503)
T PLN02394 260 KKLMSAKGMDKEGLKCAIDHILEA-QKK---GEINEDNVLYI 297 (503)
T ss_pred HHHhhhccCCcchhhhHHHHHHhc-ccc---CCCCHHHHHHH
Confidence 6532111 0111257999999984 332 24888887654
No 14
>PTZ00404 cytochrome P450; Provisional
Probab=99.97 E-value=4.9e-30 Score=238.66 Aligned_cols=246 Identities=23% Similarity=0.395 Sum_probs=180.7
Q ss_pred cccCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCccc
Q 036271 26 RRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGK 105 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~ 105 (301)
+...+.+|||+++|++||+..+.+.++..+.+|.++||+|+++++|+.++|+++||+++++++.++...|.+|+......
T Consensus 25 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~~~~ 104 (482)
T PTZ00404 25 KIHKNELKGPIPIPILGNLHQLGNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIPSIK 104 (482)
T ss_pred hccCCCCCCCCCCCeeccHhhhcccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcceee
Confidence 44456789999999999998886678899999999999999999999999999999999999998877788887543322
Q ss_pred ceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHHH
Q 036271 106 HTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISRT 183 (301)
Q Consensus 106 ~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~~ 183 (301)
.... ..++++.+|+.|+++||++. +.|+++++++|.+.+.++++.+++.|.+.+ |+++|+.+.+.++++|+|+++
T Consensus 105 ~~~~--~~~l~~~~g~~w~~~Rk~~~-~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 181 (482)
T PTZ00404 105 HGTF--YHGIVTSSGEYWKRNREIVG-KAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMFKY 181 (482)
T ss_pred eecc--CCceeccChHHHHHHHHHHH-HHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHH
Confidence 1111 23456778999999999995 899999999999999999999999997643 677999999999999999999
Q ss_pred HhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 036271 184 VLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRK 263 (301)
Q Consensus 184 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~ 263 (301)
+||.++...+... . ....++.+.+.+++...+.....++++++.+. +..+.+...+..+.+.+++.+.++++++..+
T Consensus 182 ~fG~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (482)
T PTZ00404 182 IFNEDISFDEDIH-N-GKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLKTID 258 (482)
T ss_pred Hhccccccccccc-h-hHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 9999886432100 0 00144666666665544332223333333321 1111222344566777888888877765432
Q ss_pred CCCCCCCCCCHHHHHhhc
Q 036271 264 GNLKDFVPKDMVDLLLQM 281 (301)
Q Consensus 264 ~~~~~~~~~d~ld~lL~~ 281 (301)
.. .++|+++.|++.
T Consensus 259 --~~--~~~dll~~ll~~ 272 (482)
T PTZ00404 259 --PE--VPRDLLDLLIKE 272 (482)
T ss_pred --CC--CcccHHHHHHHH
Confidence 11 267999999983
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.97 E-value=2.3e-30 Score=234.86 Aligned_cols=254 Identities=20% Similarity=0.226 Sum_probs=174.1
Q ss_pred CCCCCCCCCccccccccC-C-CCchH-HHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCC--CCCcc
Q 036271 30 KFPAGPKPWPIIGNLNLI-G-PLPHQ-SLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRP--QTAAG 104 (301)
Q Consensus 30 ~~ppgP~~~PllGnl~~~-~-~~~~~-~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~--~~~~~ 104 (301)
+-.|||+|+|++||+..+ . +.+.. ....|.++ ||+++++.|.+|.++|+|||+||+|++++.++|.+|. .....
T Consensus 31 rGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~-~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~~~d~ 109 (499)
T KOG0158|consen 31 RGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKY-RPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPIYGDP 109 (499)
T ss_pred CCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcC-CCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCCcCCC
Confidence 356899999999999886 2 22333 34445444 9999999999999999999999999999999999954 22222
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISR 182 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~ 182 (301)
.. ......++...|+.||++|..++ |+|++.+++.+.++|++.++++++++.+.. +..+++.+.+.++|.|||.+
T Consensus 110 ~~--~l~~~~Lf~~~g~~WK~lR~~ls-P~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~~~yT~DVI~~ 186 (499)
T KOG0158|consen 110 ED--PLSALNLFFLRGERWKRLRTKLS-PTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLCARYTTDVIGS 186 (499)
T ss_pred CC--cccccCchhccCchHHHHHHhhc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHHHHHHHHHHhH
Confidence 11 12235567788999999999995 999999999999999999999999999854 34789999999999999999
Q ss_pred HHhCccccCCCccchhhhhHHHHHHHHHHHHHh-hccccc----chhccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 036271 183 TVLGKKYFSESKAEDSIVTLEEFQEMLDELFLL-NGVLNI----GDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDE 257 (301)
Q Consensus 183 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 257 (301)
++||.+.++..++. .+|...-...... .....+ ...+|.+... + .......+....+.+.+.+.|+.
T Consensus 187 ~AfG~~~~s~~d~~------~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~-l-~~~~~~~~~~~~~~~~v~~~v~~ 258 (499)
T KOG0158|consen 187 CAFGLDANSLRDPK------AEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP-L-RVKLFPEDVTDFFRKLVNSRVEQ 258 (499)
T ss_pred hhcccchhhhcCch------HHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh-h-hcccChHHHHHHHHHHHHHHHHH
Confidence 99999998766444 4555433333332 111111 1122322111 0 00111123333334444455544
Q ss_pred HHhhhcCCCCCCCCCCHHHHHhhcccC-C-CC--cccCcccchheecC
Q 036271 258 HKANRKGNLKDFVPKDMVDLLLQMADD-P-NL--DVKLNYDSVRGFTQ 301 (301)
Q Consensus 258 ~~~~~~~~~~~~~~~d~ld~lL~~~~d-~-~~--~~~lt~~~i~~~~~ 301 (301)
| ..++. .++||+|+||++..+ . +. ...+|.|||.+.|+
T Consensus 259 R----~~~~~--~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQaf 300 (499)
T KOG0158|consen 259 R----EKENI--ERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAF 300 (499)
T ss_pred H----HhcCC--CCchHHHHHHHhhcccccccccccccCHHHHHHHHH
Confidence 4 21232 389999999995432 1 11 11599999998764
No 16
>PLN02500 cytochrome P450 90B1
Probab=99.97 E-value=5.4e-30 Score=238.75 Aligned_cols=245 Identities=13% Similarity=0.201 Sum_probs=171.9
Q ss_pred cccCCCCCCCCCCccccccccC-C----CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCC
Q 036271 26 RRALKFPAGPKPWPIIGNLNLI-G----PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQ 100 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~-~----~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~ 100 (301)
++..++||||+++|++||+..+ . ..++..+.+|+++||++|++++|+.++||++||++++++|++++..|++|..
T Consensus 34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 3445789999999999997643 2 2456778999999999999999999999999999999999998888876543
Q ss_pred CCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhh-hHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHH
Q 036271 101 TAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLES-YQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSI 179 (301)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~i 179 (301)
......+ + .++++..+|+.||++||+++ +.|++.+++. +.+.+++.+..+++.|.+ ++++|+.+.++++++|+
T Consensus 114 ~~~~~~~--g-~~~~~~~~g~~wr~~Rk~~~-~~f~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~vd~~~~~~~~~~~v 187 (490)
T PLN02500 114 RSIGGIL--G-KWSMLVLVGDMHRDMRSISL-NFLSHARLRTHLLKEVERHTLLVLDSWKE--NSTFSAQDEAKKFTFNL 187 (490)
T ss_pred hHHHHHh--C-cccccccCCHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHhCC--CCCEEehHHHHHHHHHH
Confidence 2222222 2 22344567999999999995 8899988887 467788888888887754 56799999999999999
Q ss_pred HHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 036271 180 ISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHK 259 (301)
Q Consensus 180 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~ 259 (301)
|++++||.+.+..+ . +.+.+.+.+....... ....+|. .. .++..+..+.+++++.++|++++
T Consensus 188 i~~~~fg~~~~~~~----~----~~~~~~~~~~~~~~~~--~~~~~p~------~~-~~~~~~~~~~~~~~~~~~i~~~~ 250 (490)
T PLN02500 188 MAKHIMSMDPGEEE----T----EQLKKEYVTFMKGVVS--APLNFPG------TA-YRKALKSRATILKFIERKMEERI 250 (490)
T ss_pred HHHHHhCCCCCchH----H----HHHHHHHHHHHhhhhc--chhcCCC------cc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998763221 1 2333333333221111 1111221 11 23445567788899999999887
Q ss_pred hhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 260 ANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 260 ~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+..++......+.|+++.+++. ..+|+++|++.+
T Consensus 251 ~~~~~~~~~~~~~d~l~~ll~~-------~~ls~~~i~~~~ 284 (490)
T PLN02500 251 EKLKEEDESVEEDDLLGWVLKH-------SNLSTEQILDLI 284 (490)
T ss_pred HhhhcccCCCCcchHHHHHHhc-------cCCCHHHHHHHH
Confidence 6433111111257999999972 138888887654
No 17
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.96 E-value=2.9e-29 Score=230.57 Aligned_cols=258 Identities=29% Similarity=0.497 Sum_probs=195.2
Q ss_pred CCCCCCCccccccccCC--CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccc-e-
Q 036271 32 PAGPKPWPIIGNLNLIG--PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKH-T- 107 (301)
Q Consensus 32 ppgP~~~PllGnl~~~~--~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~-~- 107 (301)
||||+++|++||+.++. +.++..+.+|.++||+||++++|+.++|+|+||+++++++.+++..|+.++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 89999999999999873 5688889999999999999999999999999999999999998878887754222221 1
Q ss_pred eccCcceeeCCCChhhHHHHHHHHHhhccHH-HHhhhHHHHHHHHHHHHHHHHhhcC--CceehHHHHHHHHHHHHHHHH
Q 036271 108 TYNYLNLTWAPYGPYWRQGRKLYLSELFSSK-RLESYQYIRVEEYRAFISRLYALSG--KPVVLKEHLSRVTLSIISRTV 184 (301)
Q Consensus 108 ~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~g--~~vd~~~~~~~~t~~ii~~~~ 184 (301)
... ..+++..+|+.|+.+|+++. +.|+.. ++ .+.+.++++++++++.|.+..+ +++|+.+.++++++|++++++
T Consensus 81 ~~~-~~~l~~~~~~~~~~~R~~~~-~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~~~ 157 (463)
T PF00067_consen 81 PFG-GKGLFFSDGERWRRQRRLLA-PAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGRVL 157 (463)
T ss_dssp HHT-TTSSTTSSHHHHHHHHHHHH-HHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHHHH
T ss_pred ccc-cccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccccc
Confidence 122 23455666899999999996 777777 66 8999999999999999998763 369999999999999999999
Q ss_pred hCccccCCCccchhhhhHHHHHHHHHHHHHhhcc--cccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 036271 185 LGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGV--LNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANR 262 (301)
Q Consensus 185 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~ 262 (301)
||.+++..+... ..++.+.+.++....+. ..+...+|++++++. ...+...+..+.+.+++.++|+++++..
T Consensus 158 fG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 231 (463)
T PF00067_consen 158 FGKDFGSLDDED-----FEEFLEAFDELFELLSNFFWNLPFFFPWLKYLPT-PLFRRFKRARDRLRKYIKEIIEERREEL 231 (463)
T ss_dssp HSSHHHGTTHHH-----HHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTSSH-HHHHHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred ccceeeeccccc-----cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 999876333221 14556666666554322 123456777776643 3445566677888999999999998876
Q ss_pred cCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 263 KGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 263 ~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+... ....|+++.+|+...+.+++..+|+++|.+.+
T Consensus 232 ~~~~--~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~ 267 (463)
T PF00067_consen 232 DDGD--ESRRDLLDSLLQASSDSDGPSGLSDEEIAAEL 267 (463)
T ss_dssp HSSS--SSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHH
T ss_pred cccc--cccccccccccccccccccccccccccccccc
Confidence 5321 23789999999943132222369999988654
No 18
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.96 E-value=8.5e-28 Score=223.35 Aligned_cols=256 Identities=25% Similarity=0.373 Sum_probs=181.9
Q ss_pred cCCCCCCCCCCccccccccC-CC--CchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCC-c
Q 036271 28 ALKFPAGPKPWPIIGNLNLI-GP--LPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTA-A 103 (301)
Q Consensus 28 ~~~~ppgP~~~PllGnl~~~-~~--~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~-~ 103 (301)
....||||+++|++||+.++ .. .+...+.++..+||++|+.|+|+.|+|+++||+.+++||.++...+..-+..+ .
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 45679999999999999887 33 46677889999999999999999999999999999999965544333222111 2
Q ss_pred ccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-CCceehHHHHHHHHHHHHHH
Q 036271 104 GKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-GKPVVLKEHLSRVTLSIISR 182 (301)
Q Consensus 104 ~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-g~~vd~~~~~~~~t~~ii~~ 182 (301)
...+. | .++++ +.|+.|+.+||+++ ++|+.+.++.+...+.+++..++..+...+ |+.||+.+.++++|+|+||+
T Consensus 113 ~~~~l-G-~gll~-~~g~~W~~~Rk~~~-~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~tld~i~~ 188 (497)
T KOG0157|consen 113 LKPWL-G-DGLLF-SDGEKWHKHRKLLT-PAFHFEILKSFVPVFIESSLILLLLLELAASGEEVDLQDLLKRLTLDIICK 188 (497)
T ss_pred HHHHh-c-Ccccc-CCchHHHHHHhhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEcHHHHHHHHHHHHHHH
Confidence 21221 2 34454 45999999999995 899999999999999999999888887755 44499999999999999999
Q ss_pred HHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcc-ccccccccchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 036271 183 TVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIP-WLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKAN 261 (301)
Q Consensus 183 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~ 261 (301)
++||....+.+... . .++.+++......... +...| +..+++..+..++.+++.+.++.+++++|++|+++
T Consensus 189 ~~~G~~~~~~~~~~-~----~~~~~a~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~rr~~ 260 (497)
T KOG0157|consen 189 TAMGPESLDAEGPE-L----FEYVQAFDDLTELISK---RINLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRERREE 260 (497)
T ss_pred HhcCCccccccCCc-c----cHHHHHHHHHHHHHHH---HHcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99993332222122 1 4555666654443221 22344 33333222356788899999999999999999876
Q ss_pred hcCCCCC--CCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 262 RKGNLKD--FVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 262 ~~~~~~~--~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
...++.. ....|+|+.+.. ..+ ..+|+++|++.|
T Consensus 261 ~~~~~~~~~~~~~d~L~~~~~-~~~----~~l~~~~i~d~v 296 (497)
T KOG0157|consen 261 LEKEGSGEEKKRLDFLDTLLL-EED----KPLTDEDIRDEV 296 (497)
T ss_pred HHhcCCcccchhhhHHHHHHH-hcc----CCCCHHHHHHHH
Confidence 5322211 236788886333 222 358888888755
No 19
>PLN02774 brassinosteroid-6-oxidase
Probab=99.96 E-value=1.6e-27 Score=220.53 Aligned_cols=260 Identities=18% Similarity=0.193 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHhhh-hcccCCCCCCCCCCccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHH
Q 036271 8 VVIALTLLAALAFLSTF-RRRALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQ 86 (301)
Q Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~ke 86 (301)
+++++++++.++.+|.. +..+.++||||+++|++||+..+.+.+...+.+|.++||++|++++|+.++|+++||+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~r~~~ppgp~~~P~~G~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~ 87 (463)
T PLN02774 8 VLVIIVCLCSALLRWNEVRYSKKGLPPGTMGWPLFGETTEFLKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRY 87 (463)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCchhhHHHHHHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHH
Confidence 34444444444434322 23445789999999999998776445677889999999999999999999999999999999
Q ss_pred HHHhCCcccccCCCCCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhh-hHHHHHHHHHHHHHHHHhhcCCc
Q 036271 87 FLQTHDHIFASRPQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLES-YQYIRVEEYRAFISRLYALSGKP 165 (301)
Q Consensus 87 il~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~g~~ 165 (301)
++.+++..|..+........+ + .+++++.+|+.|+.+|++++ ++|++..++. +.+.+.+.++++++.|.. +++
T Consensus 88 il~~~~~~~~~~~~~~~~~~l--g-~~~~~~~~g~~w~~~R~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 161 (463)
T PLN02774 88 ILMNEGKGLVPGYPQSMLDIL--G-TCNIAAVHGSTHRYMRGSLL-SLISPTMIRDHLLPKIDEFMRSHLSGWDG--LKT 161 (463)
T ss_pred HHcCCCCeEEecCCHHHHHHh--C-ccchhhcCCHHHHHHHHHHH-HhcCHHHHHHHHHHHHHHHHHHHHHhhCC--CCC
Confidence 999887777544322222222 2 23445667999999999995 8999988875 789999988888888864 468
Q ss_pred eehHHHHHHHHHHHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHH
Q 036271 166 VVLKEHLSRVTLSIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKK 245 (301)
Q Consensus 166 vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~ 245 (301)
+|+.+.++.++++++++++||.+... . . .++.+.+..+.. +.. .+| .++|... .++..+..+
T Consensus 162 v~~~~~~~~~~~~~~~~~~~g~~~~~----~-~----~~~~~~~~~~~~--~~~----~~~--~~lp~~~-~~~~~~~~~ 223 (463)
T PLN02774 162 IDIQEKTKEMALLSALKQIAGTLSKP----I-S----EEFKTEFFKLVL--GTL----SLP--IDLPGTN-YRSGVQARK 223 (463)
T ss_pred EEeeHHHHHHHHHHHHHHHcCCCChH----H-H----HHHHHHHHHHhc--ccc----cCC--cCCCChh-hhHHHHHHH
Confidence 99999999999999999999976421 1 1 222222222111 111 122 1232222 234556778
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 246 KFDRFHDHVFDEHKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 246 ~~~~~~~~~I~~~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.+.+++.+.|++++++ +.. ++|+++.||+ ..++ +..+|+++|.+.+
T Consensus 224 ~~~~~~~~~i~~r~~~----~~~--~~d~l~~ll~-~~~~--~~~~s~~ei~~~~ 269 (463)
T PLN02774 224 NIVRMLRQLIQERRAS----GET--HTDMLGYLMR-KEGN--RYKLTDEEIIDQI 269 (463)
T ss_pred HHHHHHHHHHHHHHhc----CCC--cccHHHHHHh-CccC--CCCCCHHHHHHHH
Confidence 8889999999887653 112 6799999997 3322 3358999988754
No 20
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.96 E-value=3e-27 Score=220.47 Aligned_cols=256 Identities=13% Similarity=0.093 Sum_probs=169.8
Q ss_pred CCCCCCCccccccccCCCCchHHHHHHHH----hhCCceE---EecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 32 PAGPKPWPIIGNLNLIGPLPHQSLHKLSQ----KYGQIMQ---LKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 32 ppgP~~~PllGnl~~~~~~~~~~~~~~~~----~yG~i~~---~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
.|||+++|++||++++...... +.+|.. +||..++ .|+|+.|+|+|+||+++++||+++.+.|.+++.....
T Consensus 33 ~p~p~~~pl~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~~~~ 111 (500)
T PLN02169 33 QPILKNWPFLGMLPGMLHQIPR-IYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEFKKI 111 (500)
T ss_pred CCCCCCCCcccchHHHHHccCc-HHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHHHHH
Confidence 4799999999999776222222 444444 4786655 6889999999999999999999987777776432111
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhh--hHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLES--YQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSII 180 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii 180 (301)
... .+ +++++++|+.||++||+++ |+|+...++. +.+.+.++++.+++.+.+.+ |+++|+.+.+.++|+|||
T Consensus 112 ~~~--~g-~gl~~~~g~~Wr~~Rk~l~-p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~dvi 187 (500)
T PLN02169 112 FDV--LG-EGILTVDFELWEDLRKSNH-ALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMFDTS 187 (500)
T ss_pred HHh--hc-CcccccCcHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHHHHH
Confidence 111 12 3455667999999999995 9999887653 34677788889999987643 678999999999999999
Q ss_pred HHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcccc-----ccccccchHHHHHHHHHHHHHHHHHHH
Q 036271 181 SRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWL-----DFLDLQGYVKRMKALKKKFDRFHDHVF 255 (301)
Q Consensus 181 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~I 255 (301)
++++||.+.+..+... . ..++.+++........ ..++.|++ ++++ .+..++..+..+.+++++.++|
T Consensus 188 ~~~~fG~~~~~~~~~~-~---~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I 259 (500)
T PLN02169 188 SILMTGYDPMSLSIEM-L---EVEFGEAADIGEEAIY---YRHFKPVILWRLQNWIG-IGLERKMRTALATVNRMFAKII 259 (500)
T ss_pred HhheeCCCccccCCCC-C---CCHHHHHHHHHHHHHH---hHHhccHHHHHHHHHhC-CchhhHHHHHHHHHHHHHHHHH
Confidence 9999999875432111 0 0344444443332211 11223321 2222 2345667788899999999999
Q ss_pred HHHHhhhcCCC-CCCCCCCHHHHHhhcccCC-CCcccCcccchheec
Q 036271 256 DEHKANRKGNL-KDFVPKDMVDLLLQMADDP-NLDVKLNYDSVRGFT 300 (301)
Q Consensus 256 ~~~~~~~~~~~-~~~~~~d~ld~lL~~~~d~-~~~~~lt~~~i~~~~ 300 (301)
++|+++..+.+ .+...+|+++.||+...++ ..+..+|+++|++.+
T Consensus 260 ~~r~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~ 306 (500)
T PLN02169 260 SSRRKEEISRAETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVI 306 (500)
T ss_pred HHHHHHhhccccccCCCcCHHHHHHhccccccccccCCChHHHHHHH
Confidence 99876421111 1112579999999842211 112347888887654
No 21
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.96 E-value=3.2e-27 Score=218.56 Aligned_cols=236 Identities=17% Similarity=0.261 Sum_probs=170.9
Q ss_pred cCCCCCCCCCCccccccccC-CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccc
Q 036271 28 ALKFPAGPKPWPIIGNLNLI-GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKH 106 (301)
Q Consensus 28 ~~~~ppgP~~~PllGnl~~~-~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~ 106 (301)
..++||||+++|++||+.++ .+.++..+.+|.++||+++++++|+.++|+++||+++++++.++.+.| ++.......
T Consensus 33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~--~~~~~~~~~ 110 (463)
T PLN02196 33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPASKE 110 (463)
T ss_pred CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc--cccCchHHH
Confidence 34679999999999998775 667889999999999999999999999999999999999999887766 332221111
Q ss_pred eeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHHHHHHHhC
Q 036271 107 TTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLG 186 (301)
Q Consensus 107 ~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~ii~~~~fG 186 (301)
...+ ..+++..+|+.|+++||+++ +.|++++++.+.+.++++++++++.|. ++++|+.+.++++++++++.++||
T Consensus 111 ~~~g-~~~l~~~~g~~w~~~Rk~l~-~~f~~~~l~~~~~~i~~~~~~~~~~~~---~~~v~~~~~~~~~~~~v~~~~~fG 185 (463)
T PLN02196 111 RMLG-KQAIFFHQGDYHAKLRKLVL-RAFMPDAIRNMVPDIESIAQESLNSWE---GTQINTYQEMKTYTFNVALLSIFG 185 (463)
T ss_pred HHcC-cccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHcCC---CCeEEeHHHHHHHHHHHHHHHHcC
Confidence 1122 23455677999999999996 789999999999999999999998885 467999999999999999999999
Q ss_pred ccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 036271 187 KKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNL 266 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~ 266 (301)
.+..... ..+.+....+. .. ...+|+ ++|. ...++..+..+.+.+++.++|+++++..
T Consensus 186 ~~~~~~~---------~~~~~~~~~~~---~~---~~~~~~--~~p~-~~~~~~~~a~~~~~~~~~~~i~~~~~~~---- 243 (463)
T PLN02196 186 KDEVLYR---------EDLKRCYYILE---KG---YNSMPI--NLPG-TLFHKSMKARKELAQILAKILSKRRQNG---- 243 (463)
T ss_pred CCCchHH---------HHHHHHHHHHh---cc---hhcccc--cCCC-ccchHHHHHHHHHHHHHHHHHHHHhhcC----
Confidence 8652111 22222111111 11 112332 1221 1124556677888889999998876531
Q ss_pred CCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 267 KDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 267 ~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
.+ +.|+++.+++ . +..+|+++|.+.+
T Consensus 244 ~~--~~d~l~~ll~-~-----~~~l~~~ei~~~~ 269 (463)
T PLN02196 244 SS--HNDLLGSFMG-D-----KEGLTDEQIADNI 269 (463)
T ss_pred CC--cccHHHHHHh-c-----CCCCCHHHHHHHH
Confidence 12 6799999986 1 1248888887644
No 22
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.95 E-value=1.1e-26 Score=215.01 Aligned_cols=241 Identities=15% Similarity=0.179 Sum_probs=162.9
Q ss_pred cccCCCCCCCCCCccccccccC-C----CCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCC
Q 036271 26 RRALKFPAGPKPWPIIGNLNLI-G----PLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQ 100 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~-~----~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~ 100 (301)
....++||||.++|++||++++ . ..++..+.+|+++||++|++++|+.++|+|+||+++++++++++..|++++.
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~ 105 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP 105 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence 3445689999999999999876 2 3478888999999999999999999999999999999999999888877643
Q ss_pred CCcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHH-HHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHH
Q 036271 101 TAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQY-IRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSI 179 (301)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~i 179 (301)
......+ |. +++++.+|+.|+++||++. ++++.+.++.+.. .+.+.+...++.| ++++++.+.+++++++|
T Consensus 106 ~~~~~~l--g~-~~l~~~~g~~wr~~R~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~t~~v 177 (472)
T PLN02987 106 GSISNLL--GK-HSLLLMKGNLHKKMHSLTM-SFANSSIIKDHLLLDIDRLIRFNLDSW----SSRVLLMEEAKKITFEL 177 (472)
T ss_pred HHHHHHh--Cc-ccccccCcHHHHHHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHhh----ccceehHHHHHHHHHHH
Confidence 2222222 22 3344557999999999974 5445455544321 1223333333433 24799999999999999
Q ss_pred HHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Q 036271 180 ISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHK 259 (301)
Q Consensus 180 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~ 259 (301)
+++++||.+..... +.+.+.+....... ..+++|++. +..++..+..+++++++.++|++++
T Consensus 178 i~~~~fg~~~~~~~---------~~~~~~~~~~~~~~----~~~~~p~l~-----~~~~~~~~~~~~~~~~~~~~i~~r~ 239 (472)
T PLN02987 178 TVKQLMSFDPGEWT---------ESLRKEYVLVIEGF----FSVPLPLFS-----TTYRRAIQARTKVAEALTLVVMKRR 239 (472)
T ss_pred HHHHHcCCCChHHH---------HHHHHHHHHHHhhh----hcCCCcCCC-----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997653111 22222222221110 112345431 2245566788889999999999987
Q ss_pred hhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 260 ANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 260 ~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+... .+. ..++|+++.|++ ..+ .+|+++|.+.+
T Consensus 240 ~~~~-~~~-~~~~d~l~~ll~-~~~-----~~~~~ei~~~~ 272 (472)
T PLN02987 240 KEEE-EGA-EKKKDMLAALLA-SDD-----GFSDEEIVDFL 272 (472)
T ss_pred hhhh-ccC-cccccHHHHHHh-cCC-----CCCHHHHHHHH
Confidence 6532 111 126799999998 322 48888887643
No 23
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.95 E-value=2.3e-26 Score=214.49 Aligned_cols=247 Identities=20% Similarity=0.259 Sum_probs=171.3
Q ss_pred cccCCCCCCCCCCccccccccC-----CCCchHHHHHHHHhhCC--ceEEecCCccEEEecCHHHHHHHHHhCCcccccC
Q 036271 26 RRALKFPAGPKPWPIIGNLNLI-----GPLPHQSLHKLSQKYGQ--IMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASR 98 (301)
Q Consensus 26 ~~~~~~ppgP~~~PllGnl~~~-----~~~~~~~~~~~~~~yG~--i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R 98 (301)
+...++||||+++|++||++++ ...++..+.+|.++||+ ++++++|+.++|+++||+++++++.++ +.|.++
T Consensus 38 ~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~ 116 (490)
T PLN02302 38 EGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPG 116 (490)
T ss_pred cCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccC
Confidence 3344789999999999998765 23578889999999997 799999999999999999999999876 446544
Q ss_pred CCCCcccceeccCcceeeCCCChhhHHHHHHHHHhhc-cHHHHhhhHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHH
Q 036271 99 PQTAAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELF-SSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTL 177 (301)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~ 177 (301)
........ .+ .+.+...+|+.|+++||++. +.| ++++++.+.+.++++++++++.+.+ ++++|+.+.++++++
T Consensus 117 ~~~~~~~~--~g-~~~~~~~~g~~w~~~R~~~~-~~f~~~~~l~~~~~~i~~~v~~~~~~~~~--~~~v~~~~~~~~~~~ 190 (490)
T PLN02302 117 WPESTVEL--IG-RKSFVGITGEEHKRLRRLTA-APVNGPEALSTYIPYIEENVKSCLEKWSK--MGEIEFLTELRKLTF 190 (490)
T ss_pred CchhHHHH--hc-cccccccCcHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCEehHHHHHHHHH
Confidence 32222221 12 23344557999999999996 677 5788999999999999999999865 457999999999999
Q ss_pred HHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHH
Q 036271 178 SIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDE 257 (301)
Q Consensus 178 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 257 (301)
+++++++||.+.+... +++.+....+...... ....+| ...+ ++..+..+.+.+++.+.|++
T Consensus 191 ~vi~~~~~G~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~p------~~~~-~~~~~~~~~l~~~~~~~i~~ 252 (490)
T PLN02302 191 KIIMYIFLSSESELVM---------EALEREYTTLNYGVRA--MAINLP------GFAY-HRALKARKKLVALFQSIVDE 252 (490)
T ss_pred HHHHHHHcCCCChHHH---------HHHHHHHHHHHHHhhh--CCcCCC------chhh-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999998653111 2232222221111100 011122 1111 23345567788899999988
Q ss_pred HHhhhcCCCCCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 258 HKANRKGNLKDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 258 ~~~~~~~~~~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+++... .+......|+++.|++. .+++ +..+|+++|.+.+
T Consensus 253 ~~~~~~-~~~~~~~~d~l~~ll~~-~~~~-~~~~~~~~i~~~~ 292 (490)
T PLN02302 253 RRNSRK-QNISPRKKDMLDLLLDA-EDEN-GRKLDDEEIIDLL 292 (490)
T ss_pred HHHhhh-ccCCCCcCCHHHHHHhh-hccC-CCCCCHHHHHHHH
Confidence 876532 11112368999999983 3322 3458998887653
No 24
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.95 E-value=4.5e-26 Score=213.73 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=170.2
Q ss_pred CCCCCCCCccccccccCCCCchHHHHHHHHhh---CCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCC-cccc
Q 036271 31 FPAGPKPWPIIGNLNLIGPLPHQSLHKLSQKY---GQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTA-AGKH 106 (301)
Q Consensus 31 ~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~y---G~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~-~~~~ 106 (301)
-+|||+++|++||+..+.. ++..+.+|.++| |++|++++|+.++|+++||+++++++.++...|..++... ....
T Consensus 31 ~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 109 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLK-NYDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYMEV 109 (516)
T ss_pred ccCCCCCCCeecchHHHHh-ccchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHHH
Confidence 3689999999999865422 244577888888 8999999999999999999999999988755565443211 1111
Q ss_pred eeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHH-HHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHHH
Q 036271 107 TTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIR-VEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISRT 183 (301)
Q Consensus 107 ~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~~ 183 (301)
+ .+ +++++.+|+.|+++||+++ +.|+.++++.|.+.+ .+.++.+++.+.+.. |+++|+.+.++++++|||+++
T Consensus 110 ~-~g--~~l~~~~g~~w~~~Rr~l~-~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~ 185 (516)
T PLN03195 110 L-LG--DGIFNVDGELWRKQRKTAS-FEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV 185 (516)
T ss_pred H-hc--CeeeccCcHHHHHHHHhcc-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence 1 12 3356678999999999995 889999999999976 555677887776532 678999999999999999999
Q ss_pred HhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccc--cc-cccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 036271 184 VLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPW--LD-FLDLQGYVKRMKALKKKFDRFHDHVFDEHKA 260 (301)
Q Consensus 184 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--l~-~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~ 260 (301)
+||.+++..+..... ..+.+.++........ ....|+ +. +++ .+..++..+..+.+++++.++|+++++
T Consensus 186 ~fG~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 257 (516)
T PLN03195 186 GFGVEIGTLSPSLPE----NPFAQAFDTANIIVTL---RFIDPLWKLKKFLN-IGSEALLSKSIKVVDDFTYSVIRRRKA 257 (516)
T ss_pred HhCCCccccccCCCc----cHHHHHHHHHHHHHHH---HHhcchhhHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988643311100 2343333332221100 001121 11 121 122334455677788899999988876
Q ss_pred hhcCC-C-CCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 261 NRKGN-L-KDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 261 ~~~~~-~-~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
+..+. . .+...+|+++.|++ ..++ ++..+|+++|.+.+
T Consensus 258 ~~~~~~~~~~~~~~d~l~~ll~-~~~~-~~~~l~~~~i~~~~ 297 (516)
T PLN03195 258 EMDEARKSGKKVKHDILSRFIE-LGED-PDSNFTDKSLRDIV 297 (516)
T ss_pred HHhccccccccccccHHHHHHh-ccCC-CCCCCCHHHHHHHH
Confidence 43211 0 11126799999998 3332 23359999887653
No 25
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.95 E-value=1.8e-26 Score=213.02 Aligned_cols=245 Identities=18% Similarity=0.257 Sum_probs=170.5
Q ss_pred ccCCCCCCCCCCccccccccC-----CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCC
Q 036271 27 RALKFPAGPKPWPIIGNLNLI-----GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQT 101 (301)
Q Consensus 27 ~~~~~ppgP~~~PllGnl~~~-----~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~ 101 (301)
+..++||||+++|++||++++ ...|+..+.+|+++||+||++++|+.++||++||++++++|.++++.|++|+..
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 445689999999999999876 235788899999999999999999999999999999999999998888877432
Q ss_pred CcccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhh-hHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHHH
Q 036271 102 AAGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLES-YQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSII 180 (301)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~ii 180 (301)
.. ..+. | .+++++.+|+.||++|+++. +.|++..++. ..+.+.+.++++++.+.+ ++++|+.+.+++++++|+
T Consensus 84 ~~-~~l~-g-~~~~~~~~g~~wr~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~vi 157 (452)
T PLN03141 84 SL-TELM-G-KSSILLINGSLQRRVHGLIG-AFLKSPHLKAQITRDMERYVSESLDSWRD--DPPVLVQDETKKIAFEVL 157 (452)
T ss_pred hH-HHHh-C-cccccccCcHHHHHHHHHHH-HhcCcHHHHHHHHHHHHHHHHHHHHhccC--CCCEEhHHHHHHHHHHHH
Confidence 22 1122 2 23455667999999999985 7887776665 345666666666666543 578999999999999999
Q ss_pred HHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Q 036271 181 SRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKA 260 (301)
Q Consensus 181 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~ 260 (301)
++++||.+... + . +++.+.+..+..... .+|+ ++|...+ ++..+..+.+.+++.++|+++++
T Consensus 158 ~~~~~G~~~~~----~-~----~~~~~~~~~~~~~~~------~~~~--~~p~~~~-~~~~~~~~~l~~~~~~~i~~~~~ 219 (452)
T PLN03141 158 VKALISLEPGE----E-M----EFLKKEFQEFIKGLM------SLPI--KLPGTRL-YRSLQAKKRMVKLVKKIIEEKRR 219 (452)
T ss_pred HHHHcCCCchH----H-H----HHHHHHHHHHhhhHH------hCcc--CCCchHh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999976521 1 1 333333333322111 1221 1222122 23445678889999999998876
Q ss_pred hhcCCCCC--CCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 261 NRKGNLKD--FVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 261 ~~~~~~~~--~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
..+.+.+. ..+.|++|.+++. . +..+|+++|...+
T Consensus 220 ~~~~~~~~~~~~~~d~l~~ll~~-~----~~~l~~~~i~~~~ 256 (452)
T PLN03141 220 AMKNKEEDETGIPKDVVDVLLRD-G----SDELTDDLISDNM 256 (452)
T ss_pred HHhccCccccCChhhHHHHHHhc-C----CCCCCHHHHHHHH
Confidence 54311110 1257999999983 2 2358888887654
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.92 E-value=2.8e-24 Score=200.20 Aligned_cols=251 Identities=14% Similarity=0.183 Sum_probs=176.1
Q ss_pred CCCCCCCCCcccccccc-C----CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcc
Q 036271 30 KFPAGPKPWPIIGNLNL-I----GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAG 104 (301)
Q Consensus 30 ~~ppgP~~~PllGnl~~-~----~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~ 104 (301)
++-.|-.|+|++|+.++ + ...++..+.+|+++|||||++++|+.++|+++||+++++++.+.+..|.+++.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~ 91 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS 91 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence 45678999999998544 3 345788999999999999999999999999999999999999887788877532222
Q ss_pred cceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHH-HHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHH
Q 036271 105 KHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQY-IRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIIS 181 (301)
Q Consensus 105 ~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~ 181 (301)
... .+ +++++.+|+.|+++||++. +.|+.+.++.+.+ ++.++++.+++.+.+.+ |++||+.+.++++++|+|+
T Consensus 92 ~~~-~~--~~i~~~~g~~wk~~Rk~l~-~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dvi~ 167 (489)
T PLN02936 92 EFL-FG--SGFAIAEGELWTARRRAVV-PSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDVIG 167 (489)
T ss_pred HHH-hc--CccccCCchHHHHHHHhhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Confidence 211 12 3455567999999999995 8999888888755 78999999999998754 6799999999999999999
Q ss_pred HHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcccc-----ccccccchHHHHHHHHHHHHHHHHHHHH
Q 036271 182 RTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWL-----DFLDLQGYVKRMKALKKKFDRFHDHVFD 256 (301)
Q Consensus 182 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 256 (301)
+++||.+++..+. + .++.+.+...+...+. ...+++|++ .++ .+..++..+..+.++.++.++|+
T Consensus 168 ~~~fG~~~~~~~~-~------~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~~i~ 237 (489)
T PLN02936 168 LSVFNYNFDSLTT-D------SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVEDLVD 237 (489)
T ss_pred HHHcCCCcccccc-C------cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999875331 1 2233333332221111 111233322 111 12234566777888888999998
Q ss_pred HHHhhhcCCC------C--CCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 257 EHKANRKGNL------K--DFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 257 ~~~~~~~~~~------~--~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
++++..++.. + .....|+++.|++ ..+ .+++++|.+.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~-~~~-----~~~~~~i~~~~ 283 (489)
T PLN02936 238 KCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLA-SRE-----EVSSVQLRDDL 283 (489)
T ss_pred HHHHHHhhcccccccccccccCchHHHHHHHh-ccc-----cCCHHHHHHHH
Confidence 7765322100 0 0125689999997 332 37777777543
No 27
>PLN02738 carotene beta-ring hydroxylase
Probab=99.91 E-value=6.4e-23 Score=195.15 Aligned_cols=245 Identities=17% Similarity=0.190 Sum_probs=164.3
Q ss_pred cccccccC-CCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCCCcccceeccCcceeeCC
Q 036271 40 IIGNLNLI-GPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQTAAGKHTTYNYLNLTWAP 118 (301)
Q Consensus 40 llGnl~~~-~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~~~~~~~~~~~~~~~~~~ 118 (301)
.+||+..+ .+.++..+.+|.++||||+++++|+.++|+|+||+.+++++.+++..|.+++......... + .++++.
T Consensus 141 ~~G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~-g--~~l~~~ 217 (633)
T PLN02738 141 AKGSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM-G--KGLIPA 217 (633)
T ss_pred ccCcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc-C--CceecC
Confidence 46777776 4456788999999999999999999999999999999999998777777664321111111 2 235567
Q ss_pred CChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc--CCceehHHHHHHHHHHHHHHHHhCccccCCCccc
Q 036271 119 YGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS--GKPVVLKEHLSRVTLSIISRTVLGKKYFSESKAE 196 (301)
Q Consensus 119 ~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~--g~~vd~~~~~~~~t~~ii~~~~fG~~~~~~~~~~ 196 (301)
+|+.|+.+|+++. ++|+.+.++.+.+++.++++.++++|.+.. |+++|+.+.++.+|+|||++++||.+++.....+
T Consensus 218 dge~wr~rRr~l~-p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~~~~~~~ 296 (633)
T PLN02738 218 DGEIWRVRRRAIV-PALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLSNDT 296 (633)
T ss_pred CcHHHHHHHHhcc-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHHHHhCCCccccccch
Confidence 7999999999995 899999999999999999999999998753 7899999999999999999999999886433111
Q ss_pred hhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcC-------CCCCC
Q 036271 197 DSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKG-------NLKDF 269 (301)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~-------~~~~~ 269 (301)
. ..+.+.+.+...............+|+++.++ ...++..+..+.+..++.++++.+++...+ .....
T Consensus 297 -~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~--~~~~~~~~~~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~ 371 (633)
T PLN02738 297 -G--IVEAVYTVLREAEDRSVSPIPVWEIPIWKDIS--PRQRKVAEALKLINDTLDDLIAICKRMVEEEELQFHEEYMNE 371 (633)
T ss_pred -H--HHHHHHHHHHHHHHHhhcchhhhhhhHHhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhccccc
Confidence 0 01223233322221111110111233333332 223344555666667777777654331110 00011
Q ss_pred CCCCHHHHHhhcccCCCCcccCcccchhee
Q 036271 270 VPKDMVDLLLQMADDPNLDVKLNYDSVRGF 299 (301)
Q Consensus 270 ~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~ 299 (301)
...|+++.|++ .. ..+|+++|.+.
T Consensus 372 ~~~dil~~Ll~-~~-----~~ls~~~L~~e 395 (633)
T PLN02738 372 RDPSILHFLLA-SG-----DDVSSKQLRDD 395 (633)
T ss_pred ccchHHHHHHH-cC-----CCCCHHHHHHH
Confidence 24689999997 32 23777777654
No 28
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.82 E-value=1.5e-18 Score=162.08 Aligned_cols=227 Identities=15% Similarity=0.125 Sum_probs=152.1
Q ss_pred CCccccccccCCCCchHHHHHHHHhhC-CceEEecCCccEEEecCHHHHHHHHHhCCcccccCCCC-CcccceeccCcce
Q 036271 37 PWPIIGNLNLIGPLPHQSLHKLSQKYG-QIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQT-AAGKHTTYNYLNL 114 (301)
Q Consensus 37 ~~PllGnl~~~~~~~~~~~~~~~~~yG-~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~~-~~~~~~~~~~~~~ 114 (301)
+.++.|+........+..+..|.++++ ..++++.++. |+++||+.+++++.++...|.+.+.. .....+ .+ . +
T Consensus 48 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~-~g-~-g 122 (502)
T PLN02426 48 RAYLTASWAKDFDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDL-LG-R-G 122 (502)
T ss_pred CCCccHHHHHhcccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHh-cC-C-c
Confidence 456888876642334666767888887 4777776553 89999999999999877677643321 111112 12 3 4
Q ss_pred eeCCCChhhHHHHHHHHHhhccHHHHhhhH--HHHHHHHHHHHHHHHhhc----CCceehHHHHHHHHHHHHHHHHhCcc
Q 036271 115 TWAPYGPYWRQGRKLYLSELFSSKRLESYQ--YIRVEEYRAFISRLYALS----GKPVVLKEHLSRVTLSIISRTVLGKK 188 (301)
Q Consensus 115 ~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~----g~~vd~~~~~~~~t~~ii~~~~fG~~ 188 (301)
+++.+|+.|+++||+++ +.|+.++++.+. +++++.++.+++.+.+.+ |.++|+.+.++++|+|+|++++||.+
T Consensus 123 i~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~ 201 (502)
T PLN02426 123 IFNVDGDSWRFQRKMAS-LELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLD 201 (502)
T ss_pred eeecCcHHHHHHHHHhH-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCC
Confidence 56677999999999994 899998888764 677777888888887643 36799999999999999999999998
Q ss_pred ccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccc----cccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 036271 189 YFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPW----LDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKG 264 (301)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~ 264 (301)
++..+..... .++.+.++........ .....+|+ .++++. +..++..+..+.++++..++|+++++...
T Consensus 202 ~~~l~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~I~~r~~~~~- 274 (502)
T PLN02426 202 PGCLELSLPI----SEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNI-GSERKLKEAIKLVDELAAEVIRQRRKLGF- 274 (502)
T ss_pred CcccCCCCCc----cHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 8643311101 3455554443322110 00111222 123322 33456677888899999999998876421
Q ss_pred CCCCCCCCCHHHHHhh
Q 036271 265 NLKDFVPKDMVDLLLQ 280 (301)
Q Consensus 265 ~~~~~~~~d~ld~lL~ 280 (301)
. ...|+++.|++
T Consensus 275 --~--~~~dll~~ll~ 286 (502)
T PLN02426 275 --S--ASKDLLSRFMA 286 (502)
T ss_pred --C--CcchHHHHHHh
Confidence 1 26799999998
No 29
>PLN02648 allene oxide synthase
Probab=99.80 E-value=1.7e-19 Score=166.68 Aligned_cols=157 Identities=11% Similarity=0.154 Sum_probs=125.9
Q ss_pred CCCCCCCCCccccccccC-----CCCchHHHHHHHHhhCC-ceEEecCCccE-------EEecCHHHHHHHHHh----CC
Q 036271 30 KFPAGPKPWPIIGNLNLI-----GPLPHQSLHKLSQKYGQ-IMQLKFGSFPV-------VVAASAEMAKQFLQT----HD 92 (301)
Q Consensus 30 ~~ppgP~~~PllGnl~~~-----~~~~~~~~~~~~~~yG~-i~~~~lg~~~~-------vvi~dp~~~keil~~----~~ 92 (301)
+.|||+.|+|++|+..++ ...|..++.+..++||+ ||+++++|.|+ |+++|||+++.+|.+ .+
T Consensus 17 ~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~~ 96 (480)
T PLN02648 17 REIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDKR 96 (480)
T ss_pred CCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhcccc
Confidence 559999999999998753 34567889999999999 99999988666 999999999999975 44
Q ss_pred cccccCCCCCcccceeccCc--ceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhh-c-CCceeh
Q 036271 93 HIFASRPQTAAGKHTTYNYL--NLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYAL-S-GKPVVL 168 (301)
Q Consensus 93 ~~f~~R~~~~~~~~~~~~~~--~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~-~-g~~vd~ 168 (301)
..|...... ... +. |.. .+++..+|+.|+++||++. ++|+. .++.|.+.|+++++.+++.|.+. . |.++|+
T Consensus 97 ~~~~~~~~~-~~~-l~-G~~~~~s~~~~~g~~H~r~Rrll~-~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~~~~vdv 171 (480)
T PLN02648 97 DVFTGTYMP-STA-FT-GGYRVLSYLDPSEPKHAKLKSFLF-ELLKS-RHRRFIPEFRAAFAELFDTWEAELAKKGKAEF 171 (480)
T ss_pred ccceeeecc-Ccc-cc-CCceeeeecCCCCchHHHHHHHHH-HHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhhCCCccc
Confidence 445443322 222 22 212 1566778999999999996 89984 67889999999999999999653 2 567999
Q ss_pred HHHHHHHHHHHHHHHHhCccccC
Q 036271 169 KEHLSRVTLSIISRTVLGKKYFS 191 (301)
Q Consensus 169 ~~~~~~~t~~ii~~~~fG~~~~~ 191 (301)
.+.++++|++|+++++||.+.+.
T Consensus 172 ~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 172 NDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred cchHHHHHHHHHHHHHcCCCcch
Confidence 99999999999999999986643
No 30
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.79 E-value=1.2e-17 Score=149.82 Aligned_cols=225 Identities=18% Similarity=0.242 Sum_probs=168.2
Q ss_pred CCCCCCCCccccccccC----CCCchHHHHHHHHhhCCceEEe-cCCccEEEecCHHHHHHHHHhCCcccccCC-CCC--
Q 036271 31 FPAGPKPWPIIGNLNLI----GPLPHQSLHKLSQKYGQIMQLK-FGSFPVVVAASAEMAKQFLQTHDHIFASRP-QTA-- 102 (301)
Q Consensus 31 ~ppgP~~~PllGnl~~~----~~~~~~~~~~~~~~yG~i~~~~-lg~~~~vvi~dp~~~keil~~~~~~f~~R~-~~~-- 102 (301)
-.|||+++|++|.+..+ ..+.|+......++|||||+.. +|+...|.+.||+.++.++.+.+. +.-|| ...
T Consensus 51 ~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~~~w 129 (519)
T KOG0159|consen 51 EIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLIEPW 129 (519)
T ss_pred hcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCcccccchh
Confidence 36899999999998743 2346788888999999999999 999999999999999999988774 34454 111
Q ss_pred cccceeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhc-----CCceehHHHHHHHHH
Q 036271 103 AGKHTTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALS-----GKPVVLKEHLSRVTL 177 (301)
Q Consensus 103 ~~~~~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~-----g~~vd~~~~~~~~t~ 177 (301)
....-..+...++++.+|+.|++.|..+++.++.+++++.|.+.+++.++++++.+++.. .-+.|+...+.++++
T Consensus 130 ~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~l~~wsl 209 (519)
T KOG0159|consen 130 VAYRDFRGGVCGLFLLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQELYRWSL 209 (519)
T ss_pred hhhHHhhccCCCcccCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHH
Confidence 111111233466778889999999999988889999999999999999999999998753 247899999999999
Q ss_pred HHHHHHHhCccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhcc-ccccccccchHHHHHHHHHHHHHHHHHHHH
Q 036271 178 SIISRTVLGKKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIP-WLDFLDLQGYVKRMKALKKKFDRFHDHVFD 256 (301)
Q Consensus 178 ~ii~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 256 (301)
..||.++||.++..-.... . ...+.|.++++.++...... ++.| +.++++...| ++.-+.-..+-.+.++.|+
T Consensus 210 Esi~~V~l~~rlG~L~~~~-~-~~a~~fi~ai~~~F~~s~~l---~~~p~l~r~~~t~~w-k~~~~~~D~i~~~~~~~Id 283 (519)
T KOG0159|consen 210 ESICLVLLGTRLGLLGESP-P-SEAQQFIDAIKKMFESSAQL---MLMPSLWRYFPTKVW-KDFVRAWDQIFDVGDKYID 283 (519)
T ss_pred HHHHHHHHhcccccccCCC-C-HHHHHHHHHHHHHHHhHHHH---HhcchHHHhCCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999997433211 0 12377888888888764432 2344 5567754444 4555666666667777777
Q ss_pred HHHhhh
Q 036271 257 EHKANR 262 (301)
Q Consensus 257 ~~~~~~ 262 (301)
+..+..
T Consensus 284 ~~l~~l 289 (519)
T KOG0159|consen 284 NALEEL 289 (519)
T ss_pred HHHHHH
Confidence 766544
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=6e-17 Score=142.33 Aligned_cols=244 Identities=14% Similarity=0.147 Sum_probs=166.6
Q ss_pred CCCCCCCC-CccccccccCCCCchHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCcccccCCC-CCcccce
Q 036271 30 KFPAGPKP-WPIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFASRPQ-TAAGKHT 107 (301)
Q Consensus 30 ~~ppgP~~-~PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~~R~~-~~~~~~~ 107 (301)
..||--.+ .|++|+...++++|..++++..+|||+||++.++|+.+=++.||+....++.+....++-.-. ......
T Consensus 31 ~~PPli~gwiP~lG~a~~fgk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~~- 109 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFGKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTTP- 109 (486)
T ss_pred CCCcccccCcchhhHHHHhccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhhh-
Confidence 47776665 689999999999999999999999999999999999999999999999999765332321110 011111
Q ss_pred eccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHH-HHhhcCCceehHHHHHHHHHHHHHHHHhC
Q 036271 108 TYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISR-LYALSGKPVVLKEHLSRVTLSIISRTVLG 186 (301)
Q Consensus 108 ~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~g~~vd~~~~~~~~t~~ii~~~~fG 186 (301)
..| .++...-.+..-.++.+++. ......++++|.+.|.++..+..+. +.+ +|......+.....++.+--.+.||
T Consensus 110 vFg-~~v~~d~~~~~~~e~~~~~k-~~L~~~~lk~~~e~m~~el~~~f~~~~~~-s~~~d~l~~~~~~ii~tAs~~ll~~ 186 (486)
T KOG0684|consen 110 VFG-KGVVYDVPNHVMMEQKKFFK-SALGGVALKSLVELMLEELHAYFETSLGE-SGETDGLYTFCRLIIFTASRLLLGG 186 (486)
T ss_pred hcC-CCccccCCCchHHHHHHHHH-HHhchhhHHHHHHHHHHHHHHHHhccccc-ccchhHhhhhhHHHhhhhHHHhhhh
Confidence 123 35565566788999999985 6778999999999999999888777 544 2444445555555555555556666
Q ss_pred ccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 036271 187 KKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNL 266 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~ 266 (301)
+....-+ +.+.....++..-...+ -..||. ++|... .++..++++.+.+.+..+|.+|+++.+ .
T Consensus 187 e~r~~~d---------~~~a~l~~dLd~~F~~~--d~~FP~--~LP~~~-~r~~~ra~~~i~k~f~~~i~~rr~s~s--~ 250 (486)
T KOG0684|consen 187 EVRDQLD---------ADVAKLYHDLDQGFQPF--DFLFPY--NLPIPL-LRRRDRARKKISKIFSKIILDRRASIS--K 250 (486)
T ss_pred hhhhhhc---------chHHHHHHHHhccccch--Hhhccc--CCCcch-hhhHHHHHHHHHHHHHHHHHHHHhccc--c
Confidence 5443222 22333444443322222 234563 555433 344558899999999999999988642 1
Q ss_pred CCCCCCCHHHHHhhcccCCCCcccCcccchhee
Q 036271 267 KDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGF 299 (301)
Q Consensus 267 ~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~ 299 (301)
...|+++.+++ ..+ ++...|++|+.+.
T Consensus 251 ---~~~dmlq~l~~-~y~--dg~~~te~e~a~~ 277 (486)
T KOG0684|consen 251 ---WDNDMLQSLME-KYK--DGRPTTEEEIAGL 277 (486)
T ss_pred ---ccHHHHHHHHH-Hhh--cCCcCcHHHHHHH
Confidence 25699999998 221 2567899888764
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.60 E-value=4.2e-14 Score=128.92 Aligned_cols=231 Identities=21% Similarity=0.258 Sum_probs=155.1
Q ss_pred CCCCCCccccccccCCC-CchHHHHHHHHhhCCceEEecCCcc--EEEecCHHHHHHHHHhCCcccccCCCCCccc---c
Q 036271 33 AGPKPWPIIGNLNLIGP-LPHQSLHKLSQKYGQIMQLKFGSFP--VVVAASAEMAKQFLQTHDHIFASRPQTAAGK---H 106 (301)
Q Consensus 33 pgP~~~PllGnl~~~~~-~~~~~~~~~~~~yG~i~~~~lg~~~--~vvi~dp~~~keil~~~~~~f~~R~~~~~~~---~ 106 (301)
++|........+..+.. .+......+.+.||.++.++..+.- ++++++++.+++++.++. .++++....... .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~ 83 (411)
T COG2124 5 PAPKLLGSPFALPRLLEFAPRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLR 83 (411)
T ss_pred CCCcccccchhhHHHhhcchhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchh
Confidence 44444444444444322 1344556677889999888875543 899999999999998764 222222111110 1
Q ss_pred eeccCcceeeCCCChhhHHHHHHHHHhhccHHHHhhhHHHHHHHHHHHHHHHHhhcCCceehHHHHHHHHHHHHHHHHhC
Q 036271 107 TTYNYLNLTWAPYGPYWRQGRKLYLSELFSSKRLESYQYIRVEEYRAFISRLYALSGKPVVLKEHLSRVTLSIISRTVLG 186 (301)
Q Consensus 107 ~~~~~~~~~~~~~g~~Wk~~Rk~l~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~g~~vd~~~~~~~~t~~ii~~~~fG 186 (301)
...+ .+.+++.+|+.|+++||+++ +.|+++.+++|.+.+.+.++++++.+ .. ++.+++.+.+..++++||+ .+||
T Consensus 84 ~~~~-~~~ll~~dg~~H~r~Rkl~~-~~F~~~~~~~~~~~i~~~~~~~~~~~-~~-~~~~~v~~~a~~l~~~vi~-~l~G 158 (411)
T COG2124 84 PVLG-DGSLLTLDGPEHTRLRKLLA-PAFTPRALRGYRPLIREIADRLLDDL-WQ-GGADLVLDFAAELTLRVIA-ELLG 158 (411)
T ss_pred hhcc-ccceeecCCHHHHHHHHHhc-cccCHHHHHHHHHHHHHHHHHHHHhc-cc-CCchhHHHHhhhhhHHHHH-HHhC
Confidence 1112 23366678999999999995 89999999999999999999999999 43 4688899999999999999 9999
Q ss_pred ccccCCCccchhhhhHHHHHHHHHHHHHhhcccccchhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 036271 187 KKYFSESKAEDSIVTLEEFQEMLDELFLLNGVLNIGDWIPWLDFLDLQGYVKRMKALKKKFDRFHDHVFDEHKANRKGNL 266 (301)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~ 266 (301)
.+.+ + . ..+.......... . .|... +. .-.++..+....+.+++.++|++||.. .
T Consensus 159 v~~~-----~-~----~~~~~~~~~~~~~---~-----~~~~~--~~-~~~~~~~~a~~~~~~~~~~li~~rR~~----~ 213 (411)
T COG2124 159 VPLE-----D-R----PQLLRWSDALLLR---L-----DPDLG--PE-EPWRRARAARRELDAYLRALIAERRAA----P 213 (411)
T ss_pred CCHH-----H-H----HHHHHHHHHHHhc---c-----CcccC--Cc-ccHHHHHHHHHHHHHHHHHHHHHhccC----C
Confidence 8763 1 1 2232322222211 0 02111 11 113456678889999999999999832 2
Q ss_pred CCCCCCCHHHHHhhcccCCCCcccCcccchheec
Q 036271 267 KDFVPKDMVDLLLQMADDPNLDVKLNYDSVRGFT 300 (301)
Q Consensus 267 ~~~~~~d~ld~lL~~~~d~~~~~~lt~~~i~~~~ 300 (301)
..|+++.|+. ..+++++ .+|++||++.+
T Consensus 214 ----~~dlls~l~~-a~~~~~~-~lsd~Ei~~~~ 241 (411)
T COG2124 214 ----RDDLLSLLLS-AEDDGGG-RLSDDEIRDEL 241 (411)
T ss_pred ----cccHHHHHHH-HhhCCCC-cCCHHHHHHHH
Confidence 6799999998 4443322 69999998754
No 33
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=79.88 E-value=7 Score=28.12 Aligned_cols=59 Identities=27% Similarity=0.348 Sum_probs=41.8
Q ss_pred CCCCCCCCCCcccccccc-CCCCchHHHHHHHHhhCCceEEecC------CccEEEecCHHHHHHHHHh
Q 036271 29 LKFPAGPKPWPIIGNLNL-IGPLPHQSLHKLSQKYGQIMQLKFG------SFPVVVAASAEMAKQFLQT 90 (301)
Q Consensus 29 ~~~ppgP~~~PllGnl~~-~~~~~~~~~~~~~~~yG~i~~~~lg------~~~~vvi~dp~~~keil~~ 90 (301)
.++||--..+-.+-||+. +. ....-++.-+||+|-++++| |.-+||-.|-..||.++.+
T Consensus 11 ~rlppevnriLyirNLp~~IT---seemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLPFKIT---SEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCChhhheeEEEecCCcccc---HHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 345555555556666655 22 12344567789999999999 4678999999999999865
No 34
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=71.74 E-value=11 Score=23.31 Aligned_cols=43 Identities=30% Similarity=0.430 Sum_probs=29.8
Q ss_pred HHHHHhhCCceEEecCC----ccEEEecCHHHHHHHHHh-CCcccccC
Q 036271 56 HKLSQKYGQIMQLKFGS----FPVVVAASAEMAKQFLQT-HDHIFASR 98 (301)
Q Consensus 56 ~~~~~~yG~i~~~~lg~----~~~vvi~dp~~~keil~~-~~~~f~~R 98 (301)
.+..++||+|-.+.+.. .-.|-..+++.|+.+... ++..+.+|
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~l~~~~~~g~ 49 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQLNGRQFNGR 49 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHHHTTSEETTE
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 35678999998888754 346777899999998864 44445444
No 35
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=60.46 E-value=18 Score=27.12 Aligned_cols=38 Identities=18% Similarity=0.372 Sum_probs=30.4
Q ss_pred hHHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhC
Q 036271 52 HQSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTH 91 (301)
Q Consensus 52 ~~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~ 91 (301)
...+.+|.++||.+--.. +...+...|++.+++++.+.
T Consensus 77 ~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~ 114 (129)
T PF13625_consen 77 EQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP 114 (129)
T ss_pred HHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence 357899999999865522 56788999999999999754
No 36
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=59.81 E-value=28 Score=32.31 Aligned_cols=45 Identities=22% Similarity=0.338 Sum_probs=26.0
Q ss_pred hHHHHHHHH-hhCCceEEecCCccEEEecCHHHHHHHHHhCCcccc
Q 036271 52 HQSLHKLSQ-KYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDHIFA 96 (301)
Q Consensus 52 ~~~~~~~~~-~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~~f~ 96 (301)
.+.+...++ +||.|++-.+-++.+-|=-=|..=++=+.+..++|+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS 257 (534)
T ss_pred hhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence 333443333 789999888877665554445555555555444554
No 37
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=55.91 E-value=30 Score=30.67 Aligned_cols=58 Identities=16% Similarity=0.125 Sum_probs=43.1
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecCCcc---------EEEecCHHHHHHHHHh-CCcccccCC
Q 036271 40 IIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGSFP---------VVVAASAEMAKQFLQT-HDHIFASRP 99 (301)
Q Consensus 40 llGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~---------~vvi~dp~~~keil~~-~~~~f~~R~ 99 (301)
++|||+.-. -...+.+..++||+|..+++-..+ +|...+++.|..++.. ++..+.+|+
T Consensus 273 fV~NL~~~~--~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr~ 340 (352)
T TIGR01661 273 FVYNLSPDT--DETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNRV 340 (352)
T ss_pred EEeCCCCCC--CHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCeE
Confidence 677776532 235677888999999988875433 8889999999999875 666666665
No 38
>COG1927 Mtd Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase [Energy production and conversion]
Probab=54.80 E-value=87 Score=25.75 Aligned_cols=105 Identities=10% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCc---ccccCCCCCccccee-ccCcceeeCCCChhhHHHHH
Q 036271 53 QSLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDH---IFASRPQTAAGKHTT-YNYLNLTWAPYGPYWRQGRK 128 (301)
Q Consensus 53 ~~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~---~f~~R~~~~~~~~~~-~~~~~~~~~~~g~~Wk~~Rk 128 (301)
....+..+.+.|=|-++++++|.. -+|..++|+|...+. ..++-|.....+.+- .|...++. .-++.---.|.
T Consensus 50 aav~~~~e~~~pDfvi~isPNpaa--PGP~kARE~l~~s~~PaiiigDaPg~~vkdeleeqGlGYIiv-k~DpmiGArRE 126 (277)
T COG1927 50 AAVTEMLEEFNPDFVIYISPNPAA--PGPKKAREILSDSDVPAIIIGDAPGLKVKDELEEQGLGYIIV-KADPMIGARRE 126 (277)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCC--CCchHHHHHHhhcCCCEEEecCCccchhHHHHHhcCCeEEEe-cCCcccchhhh
Confidence 345677788888899999988765 789999999986543 344555322222221 12223333 33667777787
Q ss_pred HHHH---hhccHHHHhhhH-----HHHHHHHHHHHHHHHh
Q 036271 129 LYLS---ELFSSKRLESYQ-----YIRVEEYRAFISRLYA 160 (301)
Q Consensus 129 ~l~~---~~f~~~~l~~~~-----~~~~~~~~~l~~~l~~ 160 (301)
++-+ .+|+...++.+. .+++++.+.+++...+
T Consensus 127 FLDPvEMA~fNaDv~kVLa~tGa~R~vQeaiD~~ie~vk~ 166 (277)
T COG1927 127 FLDPVEMASFNADVMKVLAATGAFRLVQEAIDKVIEDVKE 166 (277)
T ss_pred hcCHHHHHhhhhHHHHHHHhccHHHHHHHHHHHHHHHHhc
Confidence 7742 237776665433 2466777777777765
No 39
>PF00076 RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); InterPro: IPR000504 Many eukaryotic proteins containing one or more copies of a putative RNA-binding domain of about 90 amino acids are known to bind single-stranded RNAs [, , ]. The largest group of single strand RNA-binding proteins is the eukaryotic RNA recognition motif (RRM) family that contains an eight amino acid RNP-1 consensus sequence [, ]. RRM proteins have a variety of RNA binding preferences and functions, and include heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing (SR, U2AF, Sxl), protein components of small nuclear ribonucleoproteins (U1 and U2 snRNPs), and proteins that regulate RNA stability and translation (PABP, La, Hu) [, , ]. The RRM in heterodimeric splicing factor U2 snRNP auxiliary factor (U2AF) appears to have two RRM-like domains with specialised features for protein recognition []. The motif also appears in a few single stranded DNA binding proteins. The typical RRM consists of four anti-parallel beta-strands and two alpha-helices arranged in a beta-alpha-beta-beta-alpha-beta fold with side chains that stack with RNA bases. Specificity of RNA binding is determined by multiple contacts with surrounding amino acids. A third helix is present during RNA binding in some cases []. The RRM is reviewed in a number of publications [, , ].; GO: 0003676 nucleic acid binding; PDB: 2RNE_A 2DGO_A 2DO4_A 1YTY_B 2VOO_B 2VOP_A 2VON_B 1ZH5_B 2VOD_A 1S79_A ....
Probab=53.57 E-value=41 Score=21.25 Aligned_cols=55 Identities=22% Similarity=0.299 Sum_probs=37.5
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecCC--------ccEEEecCHHHHHHHHHh-CCcccc
Q 036271 40 IIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGS--------FPVVVAASAEMAKQFLQT-HDHIFA 96 (301)
Q Consensus 40 llGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~--------~~~vvi~dp~~~keil~~-~~~~f~ 96 (301)
++||++.-. -...+.++.++||++-.+.+.. .-+|...+++.++.++.. ++..+.
T Consensus 2 ~v~nlp~~~--t~~~l~~~f~~~g~i~~~~~~~~~~~~~~~~a~V~F~~~~~a~~a~~~l~g~~~~ 65 (70)
T PF00076_consen 2 YVGNLPPDV--TEEELRDFFSQFGKIESIKVMRNSSGKSKGYAFVEFESEEDAEKALEELNGKKIN 65 (70)
T ss_dssp EEESETTTS--SHHHHHHHHHTTSTEEEEEEEEETTSSEEEEEEEEESSHHHHHHHHHHHTTEEET
T ss_pred EEcCCCCcC--CHHHHHHHHHHhhhcccccccccccccccceEEEEEcCHHHHHHHHHHcCCCEEC
Confidence 366775531 1356788889999986665432 357888999999999984 443443
No 40
>PLN03120 nucleic acid binding protein; Provisional
Probab=53.46 E-value=51 Score=28.10 Aligned_cols=59 Identities=12% Similarity=0.149 Sum_probs=45.6
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecC------CccEEEecCHHHHHHHHHhCCcccccCCC
Q 036271 40 IIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFG------SFPVVVAASAEMAKQFLQTHDHIFASRPQ 100 (301)
Q Consensus 40 llGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg------~~~~vvi~dp~~~keil~~~~~~f~~R~~ 100 (301)
.+||+..-. -...+.++...||+|-.+.+. +.-+|...|++.++.++.-++..+.+|+.
T Consensus 8 fVgNLs~~t--TE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~V 72 (260)
T PLN03120 8 KVSNVSLKA--TERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQSV 72 (260)
T ss_pred EEeCCCCCC--CHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCceE
Confidence 567776531 245577888999999998873 46789999999999999878888888764
No 41
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=52.84 E-value=88 Score=26.30 Aligned_cols=108 Identities=14% Similarity=0.220 Sum_probs=66.5
Q ss_pred HHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCc---ccccCCCCCccccee-ccCcceeeCCCChhhHHHHHH
Q 036271 54 SLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDH---IFASRPQTAAGKHTT-YNYLNLTWAPYGPYWRQGRKL 129 (301)
Q Consensus 54 ~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~---~f~~R~~~~~~~~~~-~~~~~~~~~~~g~~Wk~~Rk~ 129 (301)
...+..+.++|=|.+.++|++.. -+|..++|+|...+- ..+|.|.....+.+- .|+..++. .-++.---.|.+
T Consensus 51 ~~~~~~~~~~pDf~i~isPN~a~--PGP~~ARE~l~~~~iP~IvI~D~p~~K~~d~l~~~g~GYIiv-k~DpMIGArREF 127 (277)
T PRK00994 51 VVKKMLEEWKPDFVIVISPNPAA--PGPKKAREILKAAGIPCIVIGDAPGKKVKDAMEEQGLGYIIV-KADPMIGARREF 127 (277)
T ss_pred HHHHHHHhhCCCEEEEECCCCCC--CCchHHHHHHHhcCCCEEEEcCCCccchHHHHHhcCCcEEEE-ecCccccchhhc
Confidence 34555678899899999887754 789999999986642 445665432222221 23223443 335666667777
Q ss_pred HHH---hhccHHHHhhhH-----HHHHHHHHHHHHHHHhhcCCce
Q 036271 130 YLS---ELFSSKRLESYQ-----YIRVEEYRAFISRLYALSGKPV 166 (301)
Q Consensus 130 l~~---~~f~~~~l~~~~-----~~~~~~~~~l~~~l~~~~g~~v 166 (301)
+-+ .+|++..++.+. -+++++.+..++...+ |++.
T Consensus 128 LDP~EMa~fNaD~~kVLa~tG~~RlvQ~elD~vi~~v~~--G~e~ 170 (277)
T PRK00994 128 LDPVEMALFNADVLKVLAGTGAVRLVQEELDKVIDQVKE--GKEI 170 (277)
T ss_pred cCHHHHHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHhc--CCCc
Confidence 642 247777666432 3578888888888866 5433
No 42
>smart00362 RRM_2 RNA recognition motif.
Probab=46.59 E-value=69 Score=19.76 Aligned_cols=39 Identities=28% Similarity=0.418 Sum_probs=28.9
Q ss_pred hHHHHHHHHhhCCceEEecC-------CccEEEecCHHHHHHHHHh
Q 036271 52 HQSLHKLSQKYGQIMQLKFG-------SFPVVVAASAEMAKQFLQT 90 (301)
Q Consensus 52 ~~~~~~~~~~yG~i~~~~lg-------~~~~vvi~dp~~~keil~~ 90 (301)
...+.++.++||++..+.+- +.-.|-..+++.++.++..
T Consensus 13 ~~~l~~~~~~~g~v~~~~~~~~~~~~~~~~~v~f~~~~~a~~a~~~ 58 (72)
T smart00362 13 EEDLKELFSKFGPIESVKIPKDTGKSKGFAFVEFESEEDAEKAIEA 58 (72)
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 45677788899998766543 2346778899999999865
No 43
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=42.93 E-value=42 Score=20.33 Aligned_cols=18 Identities=0% Similarity=-0.046 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 036271 7 WVVIALTLLAALAFLSTF 24 (301)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~ 24 (301)
+..++++++.+++.+|.+
T Consensus 13 ~~~v~~~~~F~gi~~w~~ 30 (49)
T PF05545_consen 13 IGTVLFFVFFIGIVIWAY 30 (49)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333334444443
No 44
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=42.84 E-value=76 Score=24.32 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=40.8
Q ss_pred cccccccCCCCchHHHHHHHHhhCCceEEecC---------CccEEEecCHHHHHHHHHh-CCcccccCC
Q 036271 40 IIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFG---------SFPVVVAASAEMAKQFLQT-HDHIFASRP 99 (301)
Q Consensus 40 llGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg---------~~~~vvi~dp~~~keil~~-~~~~f~~R~ 99 (301)
++|||+.-. -...+.++.++||+|..+.+- +.-+|-..+++.|+.++.. ++..+.+|+
T Consensus 38 fVgnL~~~~--te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~lng~~i~Gr~ 105 (144)
T PLN03134 38 FIGGLSWGT--DDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRH 105 (144)
T ss_pred EEeCCCCCC--CHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHHcCCCEECCEE
Confidence 567776532 245678888999999887763 2467888999999999975 444454543
No 45
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=41.53 E-value=41 Score=23.30 Aligned_cols=8 Identities=50% Similarity=0.920 Sum_probs=5.9
Q ss_pred CCCCcccc
Q 036271 35 PKPWPIIG 42 (301)
Q Consensus 35 P~~~PllG 42 (301)
|--.|+||
T Consensus 64 PIYrPvI~ 71 (94)
T PF05393_consen 64 PIYRPVIG 71 (94)
T ss_pred Cccccccc
Confidence 55678888
No 46
>cd01646 RT_Bac_retron_I RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons. The polymerase reaction of this enzyme leads to the production of a unique RNA-DNA complex called msDNA (multicopy single-stranded (ss)DNA) in which a small ssDNA branches out from a small ssRNA molecule via a 2'-5'phosphodiester linkage. Bacterial retron RTs produce cDNA corresponding to only a small portion of the retron genome.
Probab=38.06 E-value=49 Score=25.61 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=39.5
Q ss_pred cCCCCCCCCCCccccccccCCCCchHHHHHHHHh-hCCceEEecCCccEEEecCHHHHHHHHH
Q 036271 28 ALKFPAGPKPWPIIGNLNLIGPLPHQSLHKLSQK-YGQIMQLKFGSFPVVVAASAEMAKQFLQ 89 (301)
Q Consensus 28 ~~~~ppgP~~~PllGnl~~~~~~~~~~~~~~~~~-yG~i~~~~lg~~~~vvi~dp~~~keil~ 89 (301)
...+|+|+.--|+++|+... .+.++.++ .+.+..+++-..-+++.++.+.+++++.
T Consensus 51 ~~GlpqG~~lS~~L~~~~l~------~~d~~i~~~~~~~~~~RY~DD~~i~~~~~~~~~~~~~ 107 (158)
T cd01646 51 TNGLPIGPLTSRFLANIYLN------DVDHELKSKLKGVDYVRYVDDIRIFADSKEEAEEILE 107 (158)
T ss_pred CceEccCcchHHHHHHHHHH------HHHHHHHhccCCceEEEecCcEEEEcCCHHHHHHHHH
Confidence 34688999999999997432 13333333 6778888888888888888887766543
No 47
>PF14259 RRM_6: RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); PDB: 2DNN_A 1WI6_A 2EVZ_A 2ADC_A 1QM9_A 2KG1_A 2HGN_A 1U2F_A 2G4B_A 2HZC_A ....
Probab=37.94 E-value=50 Score=21.11 Aligned_cols=50 Identities=24% Similarity=0.350 Sum_probs=34.5
Q ss_pred ccccccCCCCchHHHHHHHHhhCCceEEecCC--------ccEEEecCHHHHHHHHHhCC
Q 036271 41 IGNLNLIGPLPHQSLHKLSQKYGQIMQLKFGS--------FPVVVAASAEMAKQFLQTHD 92 (301)
Q Consensus 41 lGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg~--------~~~vvi~dp~~~keil~~~~ 92 (301)
++|++.- .....+.++...||+|-.+.+.. .-+|-..+++.+++++....
T Consensus 3 i~nlp~~--~~~~~l~~~f~~~g~v~~v~~~~~~~~~~~~~a~v~f~~~~~a~~al~~~~ 60 (70)
T PF14259_consen 3 ISNLPPS--TTEEDLRNFFSRFGPVEKVRLIKNKDGQSRGFAFVEFSSEEDAKRALELLN 60 (70)
T ss_dssp EESSTTT----HHHHHHHCTTSSBEEEEEEEESTTSSEEEEEEEEESSHHHHHHHHHHHT
T ss_pred EeCCCCC--CCHHHHHHHHHhcCCcceEEEEeeeccccCCEEEEEeCCHHHHHHHHHHCC
Confidence 5666542 12355777788899887776543 34788899999999997644
No 48
>PF15206 FAM209: FAM209 family
Probab=32.73 E-value=30 Score=26.18 Aligned_cols=14 Identities=14% Similarity=0.164 Sum_probs=8.9
Q ss_pred cCCCCCCCCCCccc
Q 036271 28 ALKFPAGPKPWPII 41 (301)
Q Consensus 28 ~~~~ppgP~~~Pll 41 (301)
.-+.|||..+-|+-
T Consensus 64 keq~p~glrg~~fr 77 (150)
T PF15206_consen 64 KEQSPPGLRGCSFR 77 (150)
T ss_pred cccCCCccCcccCC
Confidence 34568887776643
No 49
>smart00360 RRM RNA recognition motif.
Probab=29.97 E-value=1.3e+02 Score=18.20 Aligned_cols=39 Identities=28% Similarity=0.425 Sum_probs=28.8
Q ss_pred hHHHHHHHHhhCCceEEecCC---------ccEEEecCHHHHHHHHHh
Q 036271 52 HQSLHKLSQKYGQIMQLKFGS---------FPVVVAASAEMAKQFLQT 90 (301)
Q Consensus 52 ~~~~~~~~~~yG~i~~~~lg~---------~~~vvi~dp~~~keil~~ 90 (301)
...+.++.+.||+|..+.+-. .-.|...+++.++.++..
T Consensus 10 ~~~l~~~f~~~g~v~~~~i~~~~~~~~~~~~a~v~f~~~~~a~~a~~~ 57 (71)
T smart00360 10 EEELRELFSKFGKIESVRLVRDKDTGKSKGFAFVEFESEEDAEKALEA 57 (71)
T ss_pred HHHHHHHHHhhCCEeEEEEEeCCCCCCCCceEEEEeCCHHHHHHHHHH
Confidence 345677888999987776533 335777999999998864
No 50
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=29.61 E-value=1.2e+02 Score=22.10 Aligned_cols=11 Identities=45% Similarity=0.525 Sum_probs=8.4
Q ss_pred CCccccccccC
Q 036271 37 PWPIIGNLNLI 47 (301)
Q Consensus 37 ~~PllGnl~~~ 47 (301)
.-|+-||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 46889998765
No 51
>PF13260 DUF4051: Protein of unknown function (DUF4051)
Probab=27.30 E-value=1e+02 Score=18.59 Aligned_cols=14 Identities=29% Similarity=0.624 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHHH
Q 036271 5 YSWVVIALTLLAAL 18 (301)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (301)
|.|.+++++++++.
T Consensus 3 iawywivli~lv~~ 16 (54)
T PF13260_consen 3 IAWYWIVLIVLVVV 16 (54)
T ss_pred HHHHHHHHHHHHHH
Confidence 66776555555543
No 52
>cd00590 RRM RRM (RNA recognition motif), also known as RBD (RNA binding domain) or RNP (ribonucleoprotein domain), is a highly abundant domain in eukaryotes found in proteins involved in post-transcriptional gene expression processes including mRNA and rRNA processing, RNA export, and RNA stability. This domain is 90 amino acids in length and consists of a four-stranded beta-sheet packed against two alpha-helices. RRM usually interacts with ssRNA, but is also known to interact with ssDNA as well as proteins. RRM binds a variable number of nucleotides, ranging from two to eight. The active site includes three aromatic side-chains located within the conserved RNP1 and RNP2 motifs of the domain. The RRM domain is found in a variety heterogeneous nuclear ribonucleoproteins (hnRNPs), proteins implicated in regulation of alternative splicing, and protein components of small nuclear ribonucleoproteins (snRNPs).
Probab=26.30 E-value=1.6e+02 Score=18.02 Aligned_cols=40 Identities=23% Similarity=0.371 Sum_probs=29.7
Q ss_pred hHHHHHHHHhhCCceEEecCC--------ccEEEecCHHHHHHHHHhC
Q 036271 52 HQSLHKLSQKYGQIMQLKFGS--------FPVVVAASAEMAKQFLQTH 91 (301)
Q Consensus 52 ~~~~~~~~~~yG~i~~~~lg~--------~~~vvi~dp~~~keil~~~ 91 (301)
...+.++.+.||+|..+.+-. .-.|-..+++.++.++..-
T Consensus 13 ~~~i~~~~~~~g~i~~~~~~~~~~~~~~~~~~v~f~s~~~a~~a~~~~ 60 (74)
T cd00590 13 EEDLRELFSKFGKVESVRIVRDKDTKSKGFAFVEFEDEEDAEKALEAL 60 (74)
T ss_pred HHHHHHHHHhcCCEEEEEEeeCCCCCcceEEEEEECCHHHHHHHHHHh
Confidence 456777888899987766543 3366679999999998753
No 53
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=25.42 E-value=1.2e+02 Score=18.43 Aligned_cols=7 Identities=14% Similarity=0.092 Sum_probs=2.8
Q ss_pred HHHHhhh
Q 036271 18 LAFLSTF 24 (301)
Q Consensus 18 ~~~~~~~ 24 (301)
++.+|.+
T Consensus 25 giv~wa~ 31 (48)
T cd01324 25 GVVVWAF 31 (48)
T ss_pred HHHHHHh
Confidence 3334443
No 54
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=24.10 E-value=1.3e+02 Score=25.36 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=52.6
Q ss_pred HHHHHHHhhCCceEEecCCccEEEecCHHHHHHHHHhCCc---ccccCCCCCccccee-ccCcceeeCCCChhhHHHHHH
Q 036271 54 SLHKLSQKYGQIMQLKFGSFPVVVAASAEMAKQFLQTHDH---IFASRPQTAAGKHTT-YNYLNLTWAPYGPYWRQGRKL 129 (301)
Q Consensus 54 ~~~~~~~~yG~i~~~~lg~~~~vvi~dp~~~keil~~~~~---~f~~R~~~~~~~~~~-~~~~~~~~~~~g~~Wk~~Rk~ 129 (301)
...+..+.++|=|.+.++|++.. -+|..++|++...+. ..+|.|.....+.+- .|+..++. .-++.---.|.+
T Consensus 50 ~~~~~~~~~~pdf~I~isPN~~~--PGP~~ARE~l~~~~iP~IvI~D~p~~k~kd~l~~~g~GYIiv-k~DpMIGArREF 126 (276)
T PF01993_consen 50 VVTKMLKEWDPDFVIVISPNAAA--PGPTKAREMLSAKGIPCIVISDAPTKKAKDALEEEGFGYIIV-KADPMIGARREF 126 (276)
T ss_dssp HHHHHHHHH--SEEEEE-S-TTS--HHHHHHHHHHHHSSS-EEEEEEGGGGGGHHHHHHTT-EEEEE-TTS------TTT
T ss_pred HHHHHHHhhCCCEEEEECCCCCC--CCcHHHHHHHHhCCCCEEEEcCCCchhhHHHHHhcCCcEEEE-ecCccccccccc
Confidence 44556678888888888876654 678899999977664 334555322211111 12223333 335555666777
Q ss_pred HHH---hhccHHHHhhhH-----HHHHHHHHHHHHHHHh
Q 036271 130 YLS---ELFSSKRLESYQ-----YIRVEEYRAFISRLYA 160 (301)
Q Consensus 130 l~~---~~f~~~~l~~~~-----~~~~~~~~~l~~~l~~ 160 (301)
+-+ .+|++..++.+. -+++.+.+..++...+
T Consensus 127 LDP~EMa~fNaD~~kVLa~tGa~RlvQ~elD~vi~~v~~ 165 (276)
T PF01993_consen 127 LDPVEMALFNADVLKVLAITGAFRLVQEELDKVIDQVKA 165 (276)
T ss_dssp --HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHc
Confidence 642 137766665432 3466777777777765
No 55
>TIGR01628 PABP-1234 polyadenylate binding protein, human types 1, 2, 3, 4 family. There are four paralogs in Homo sapiens which are expressed in testis, platelets, broadly expressed, or of unknown tissue range.
Probab=22.02 E-value=2.2e+02 Score=27.22 Aligned_cols=58 Identities=21% Similarity=0.298 Sum_probs=40.5
Q ss_pred ccccccccCCCCchHHHHHHHHhhCCceEEecC--------CccEEEecCHHHHHHHHHh-CCcccccC
Q 036271 39 PIIGNLNLIGPLPHQSLHKLSQKYGQIMQLKFG--------SFPVVVAASAEMAKQFLQT-HDHIFASR 98 (301)
Q Consensus 39 PllGnl~~~~~~~~~~~~~~~~~yG~i~~~~lg--------~~~~vvi~dp~~~keil~~-~~~~f~~R 98 (301)
-.+||+..-. ....+.++.++||.|..+++- +.-+|..++++.++.++.+ ++..+.+|
T Consensus 288 l~V~nl~~~~--~~~~L~~~F~~~G~i~~~~i~~d~~g~~~g~gfV~f~~~~~A~~A~~~~~g~~~~gk 354 (562)
T TIGR01628 288 LYVKNLDDTV--TDEKLRELFSECGEITSAKVMLDEKGVSRGFGFVCFSNPEEANRAVTEMHGRMLGGK 354 (562)
T ss_pred EEEeCCCCcc--CHHHHHHHHHhcCCeEEEEEEECCCCCcCCeEEEEeCCHHHHHHHHHHhcCCeeCCc
Confidence 3577775531 245678888999999877762 3458999999999999975 44444444
No 56
>KOG4241 consensus Mitochondrial ribosomal protein L10 [Translation, ribosomal structure and biogenesis]
Probab=20.65 E-value=1.2e+02 Score=24.80 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=24.7
Q ss_pred hhCCceEEecCCccEEEecCHHHHHHHHHh
Q 036271 61 KYGQIMQLKFGSFPVVVAASAEMAKQFLQT 90 (301)
Q Consensus 61 ~yG~i~~~~lg~~~~vvi~dp~~~keil~~ 90 (301)
+|..+.-+..|.+.+++..|++.+++++.-
T Consensus 135 ~y~~l~plfvgnh~ill~~d~~kik~~lri 164 (245)
T KOG4241|consen 135 PYSSLNPLFVGNHAILLAKDISKIKSILRI 164 (245)
T ss_pred chhhhhhheeccceEEEcCChHHHHHHHHH
Confidence 366677788888999999999999999854
No 57
>TIGR01642 U2AF_lg U2 snRNP auxilliary factor, large subunit, splicing factor. Members of this subfamily are found in plants, metazoa and fungi.
Probab=20.23 E-value=1.8e+02 Score=27.23 Aligned_cols=46 Identities=15% Similarity=0.239 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCceEEecC------------CccEEEecCHHHHHHHHHh-CCcccccCC
Q 036271 54 SLHKLSQKYGQIMQLKFG------------SFPVVVAASAEMAKQFLQT-HDHIFASRP 99 (301)
Q Consensus 54 ~~~~~~~~yG~i~~~~lg------------~~~~vvi~dp~~~keil~~-~~~~f~~R~ 99 (301)
-+.+..++||+|..+.+. |.-+|...+++.|+.++.. ++..|.+|.
T Consensus 435 dl~~~f~~~G~v~~v~i~~~~~~~~~~~~~G~~fV~F~~~e~A~~A~~~lnGr~~~gr~ 493 (509)
T TIGR01642 435 DVKTEFSKYGPLINIVIPRPNGDRNSTPGVGKVFLEYADVRSAEKAMEGMNGRKFNDRV 493 (509)
T ss_pred HHHHHHHhcCCeeEEEeeccCcCCCcCCCcceEEEEECCHHHHHHHHHHcCCCEECCeE
Confidence 356678899999988873 2237899999999999976 555666654
No 58
>PLN02196 abscisic acid 8'-hydroxylase
Probab=20.12 E-value=1.6e+02 Score=27.38 Aligned_cols=7 Identities=14% Similarity=0.401 Sum_probs=3.1
Q ss_pred HHHHHhh
Q 036271 274 MVDLLLQ 280 (301)
Q Consensus 274 ~ld~lL~ 280 (301)
++++.+.
T Consensus 328 yl~avi~ 334 (463)
T PLN02196 328 LTSRVIQ 334 (463)
T ss_pred HHHHHHH
Confidence 4444443
No 59
>PF09061 Stirrup: Stirrup; InterPro: IPR015146 The Stirrup domain, found in the prokaryotic protein ribonucleotide reductase, has a molecular mass of 9 kDa and is folded into an alpha/beta structure. It allows for binding of the reductase to DNA via electrostatic interactions, since it has a predominance of positive charges distributed on its surface []. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1DQ3_A.
Probab=20.08 E-value=2.2e+02 Score=18.45 Aligned_cols=27 Identities=19% Similarity=0.399 Sum_probs=16.3
Q ss_pred hHHHHHHHHhhCCceEEecCCccEEEec
Q 036271 52 HQSLHKLSQKYGQIMQLKFGSFPVVVAA 79 (301)
Q Consensus 52 ~~~~~~~~~~yG~i~~~~lg~~~~vvi~ 79 (301)
...|.+|+.+||-=|+.. |.+...+|.
T Consensus 9 f~afk~was~ygvefktn-gsqtlaii~ 35 (79)
T PF09061_consen 9 FNAFKEWASKYGVEFKTN-GSQTLAIIK 35 (79)
T ss_dssp HHHHHHHHHTTT-EEEEE-TTEEEEEET
T ss_pred HHHHHHHHHHhCeEEecC-CceEEEeec
Confidence 356889999999544443 444444443
No 60
>KOG3054 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.01 E-value=1.8e+02 Score=24.57 Aligned_cols=19 Identities=32% Similarity=0.343 Sum_probs=12.2
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 036271 4 AYSWVVIALTLLAALAFLS 22 (301)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~ 22 (301)
.+.|++|+.++++.++.++
T Consensus 3 ~~v~vlVaa~llV~~i~l~ 21 (299)
T KOG3054|consen 3 EIVAVLVAAALLVAVILLF 21 (299)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4677777766666655544
Done!