Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>036272
MGAMNSRLDLAEEGSVNRNWGPQGQGGAGYAGGLVAPKLAKLDFPCYDGSEDPTLWICRA
EQFFEFQGTSLENQVKLAAYHLENDAQLWFQQRKNQGHLVTWDGLKAGLLAKFAATEYED
SFGDLCKLKQTGTVSDYQPQFERLLARAGSLTDKQEAACFISGLKDGLRADVRAQNPQNL
SAAIGLARNYELKAQEIRRSVNPTFSSSVRNSSNQWNSSLTPSGSKTINLEMIFPIRNLT
PIELQRRREQELCYSCDENYTVGHKCKKLFFIEIDEEGEEATGEMYTEETPVISLHALAG
IQTPHTMRVHSQISKIPLTILIDSGSTHNYLHHRFAKITRIKPERSCLFSVVVANGERLS
SPGRCKGVRLTLQDVPIENIEAK

High Scoring Gene Products

No gene products matching your query constraints were returned by the BLAST search.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036272
        (383 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091793 - symbol:AT3G29750 species:3702 "Arabi...    85  0.00013   2


>TAIR|locus:2091793 [details] [associations]
            symbol:AT3G29750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004812
            "aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006418 "tRNA aminoacylation for protein translation"
            evidence=IEA] InterPro:IPR018150 GO:GO:0005524 GO:GO:0005737
            EMBL:CP002686 GO:GO:0006508 GO:GO:0008233 GO:GO:0006418
            InterPro:IPR021109 SUPFAM:SSF50630 GO:GO:0004812 PANTHER:PTHR22594
            InterPro:IPR013242 Pfam:PF08284 IPI:IPI00544562 RefSeq:NP_189618.1
            UniGene:At.53581 ProteinModelPortal:F4J487
            EnsemblPlants:AT3G29750.1 GeneID:822661 KEGG:ath:AT3G29750
            PhylomeDB:F4J487 ArrayExpress:F4J487 Uniprot:F4J487
        Length = 421

 Score = 85 (35.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 23/74 (31%), Positives = 39/74 (52%)

Query:   307 MRVHSQISKIPLTILIDSGSTHNYLHHRFAKITRIKPERSCLFSVVVANGERLSSPGRCK 366
             MR +  I    + + IDSG+T N++    A   ++    +   SV++   + + S G C 
Sbjct:   124 MRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCL 183

Query:   367 GVRLTLQDVPI-EN 379
             G+RL +Q+V I EN
Sbjct:   184 GIRLWVQEVEITEN 197

 Score = 80 (33.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query:   128 LKQTGTVSDYQPQFERLLARAGSLTDKQEAACFISGLKDGLRADVRAQNPQNLSA 182
             ++Q G+V DY+ +FE L  R+ +L  +     F+ GL+  L+  VR   P  +++
Sbjct:    12 IQQEGSVRDYRERFEALCLRSVTLPGQGFEEMFLQGLQPSLQTAVRELKPNGINS 66


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      383       340   0.00095  116 3  11 22  0.39    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  248 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.94u 0.09s 26.03t   Elapsed:  00:00:01
  Total cpu time:  25.94u 0.09s 26.03t   Elapsed:  00:00:01
  Start:  Sat May 11 08:06:19 2013   End:  Sat May 11 08:06:20 2013

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