Query 036277
Match_columns 246
No_of_seqs 172 out of 588
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 19:06:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dkv_A Chitinase; whole struct 100.0 3E-56 1E-60 409.2 10.6 165 66-237 3-194 (309)
2 3w3e_A Cotyledoneous yieldin-l 100.0 1.2E-55 4.2E-60 394.0 12.1 130 93-228 2-131 (242)
3 3cql_A Endochitinase; glycosyl 100.0 7.2E-54 2.5E-58 382.4 12.3 132 93-228 1-132 (243)
4 2z37_A Chitinase; family 19, c 100.0 5E-53 1.7E-57 377.0 12.6 139 93-237 1-139 (244)
5 1dxj_A Class II chitinase; hyd 100.0 1.8E-51 6.3E-56 366.6 12.2 136 93-237 1-136 (242)
6 3hbe_X Class IV chitinase CHIA 100.0 2E-47 6.7E-52 333.9 9.4 118 93-228 1-118 (204)
7 2cjl_A Chitinase G, secreted c 100.0 1.2E-37 4.2E-42 270.0 8.3 109 96-228 1-112 (204)
8 1wvv_A Chitinase C; family 19 100.0 3.6E-37 1.2E-41 276.5 8.8 113 92-228 58-173 (265)
9 1wkx_A Hevein isoform 2; aller 96.5 0.00051 1.7E-08 46.9 0.6 24 66-90 2-25 (43)
10 2kus_A SM-AMP-1.1A; plant anti 96.0 0.00084 2.9E-08 44.0 -0.5 25 64-91 4-28 (35)
11 2lb7_A WAMP-1A, antimicrobial 95.9 0.0011 3.6E-08 45.5 -0.3 23 66-89 3-25 (44)
12 1mmc_A AC-AMP2, antimicrobial 95.0 0.0067 2.3E-07 38.6 1.0 20 71-91 4-23 (30)
13 1p9g_A EAFP 2; antifungal pept 91.8 0.043 1.5E-06 37.0 0.7 19 71-90 6-24 (41)
14 1en2_A UDA, agglutinin isolect 91.1 0.019 6.5E-07 44.4 -1.9 20 66-85 2-21 (89)
15 1uha_A Lectin-D2; chitin-bindi 90.0 0.036 1.2E-06 42.2 -1.1 20 66-85 3-22 (82)
16 1ulk_A Lectin-C; chitin-bindin 87.6 0.084 2.9E-06 43.1 -0.6 30 66-95 3-38 (126)
17 1uha_A Lectin-D2; chitin-bindi 84.6 0.25 8.7E-06 37.5 0.8 24 66-90 44-67 (82)
18 1en2_A UDA, agglutinin isolect 82.3 0.31 1.1E-05 37.6 0.4 26 64-90 46-71 (89)
19 1ulk_A Lectin-C; chitin-bindin 80.2 0.33 1.1E-05 39.6 -0.1 25 65-90 84-108 (126)
20 2uvo_A Agglutinin isolectin 1; 71.3 0.57 2E-05 39.8 -1.0 27 66-92 2-34 (171)
21 2uvo_A Agglutinin isolectin 1; 69.7 1.1 3.7E-05 38.1 0.4 21 65-85 44-64 (171)
22 5pal_A Parvalbumin; calcium-bi 53.2 13 0.00045 26.1 3.6 61 93-158 1-70 (109)
23 3fs7_A Parvalbumin, thymic; ca 36.7 30 0.001 24.2 3.3 60 94-158 3-71 (109)
24 2kyc_A Parvalbumin-3, parvalbu 33.3 59 0.002 22.5 4.4 58 94-158 2-70 (108)
25 1rwy_A Parvalbumin alpha; EF-h 28.1 60 0.0021 22.4 3.7 56 96-158 4-70 (109)
26 1h8b_A ACT-EF34, alpha-actinin 27.8 56 0.0019 23.2 3.5 36 97-132 34-71 (75)
27 1fm5_A Early activation antige 26.2 18 0.00062 29.5 0.7 7 74-80 83-89 (199)
28 2pvb_A Protein (parvalbumin); 25.9 62 0.0021 22.4 3.4 60 93-158 2-70 (108)
29 1rro_A RAT oncomodulin; calciu 23.4 56 0.0019 22.6 2.8 33 94-131 2-34 (108)
No 1
>2dkv_A Chitinase; whole structure, oryza sativa L. japonica, hydrolase; HET: MES; 2.00A {Oryza sativa japonica group} PDB: 3iwr_A*
Probab=100.00 E-value=3e-56 Score=409.17 Aligned_cols=165 Identities=31% Similarity=0.689 Sum_probs=152.0
Q ss_pred eEEeecCCcCCCCCCCCCCC------cccc-------CC--------------CCcccccCHHHHHHHHcCCCCCCccCC
Q 036277 66 IVKKVKGKKVCIKGWECPTW------SKFC-------CN--------------ETISDYFQVYQFENFFSKRNTPVAHAV 118 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~------~~YC-------c~--------------~~V~siiT~~~Fd~lfp~Rn~~~c~a~ 118 (246)
.|+.|+|++.||.++|||+| ++|| |. .+|++|||+++||+||||||++.||++
T Consensus 3 ~cg~~~~~~~c~~~~Ccs~~G~Cg~t~~~Cg~gcq~~c~~~~~~~~~~~~~~~~~v~~iit~~~f~~~~~~rn~~~c~~~ 82 (309)
T 2dkv_A 3 QCGAQAGGARCPNCLCCSRWGWCGTTSDFCGDGCQSQCSGCGPTPTPTPPSPSDGVGSIVPRDLFERLLLHRNDGACPAR 82 (309)
T ss_dssp BCSTTTTTCCCGGGCEECTTSBEESSHHHHSTTCCBCSSCC------------CCGGGTSCHHHHHHHTTTTTCTTCTTT
T ss_pred CcCCCCCCCcCCCCCcCcccccccCChHHhhccccccCCCCCCCCCCCCCCCCcchhhhccHHHHHHHhhcccccCCCcC
Confidence 47889999999999999997 5677 21 358899999999999999999999999
Q ss_pred cccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCCCccccceeeeecCCCCCCcCCCCCCC
Q 036277 119 GFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYT 198 (246)
Q Consensus 119 GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~Gp~aWGlcy~eEi~~~~~YC~~s~~~~ 198 (246)
+||||++||+|+++|| +|++||+++++||||||||||++|||+|||.++|++||+|||||+||+++...||+.+. +
T Consensus 83 ~fyty~~fi~Aa~~fp--~F~~tG~~~~~krelAaFLAq~~HETggg~~~~~~~~y~wG~~~~~E~~~~~~Yc~~~~--~ 158 (309)
T 2dkv_A 83 GFYTYEAFLAAAAAFP--AFGGTGNTETRKREVAAFLGQTSHETTGGWPTAPDGPFSWGYCFKQEQNPPSDYCQPSP--E 158 (309)
T ss_dssp TCSCHHHHHHHHHTCT--TTTCSSSHHHHHHHHHHHHHHHHHHHCCCCTTCTTCGGGCTTCCSBCSSCSCCCCCCCS--S
T ss_pred CcccHHHHHHHHHhhh--hhcccCCccccHHHHHHHHhhcchhcCCCcccCCCccccccceeeeeecCCCCCcCCCC--C
Confidence 9999999999999999 99999999999999999999999999999999999999999999999998889999874 7
Q ss_pred CCCCCCCccccCCCCcccccchhHHHHHHHHhhhhhccc
Q 036277 199 YPCTPGAEYYGRGAIPIYWYACTFYIFIIVLLFKFQLLD 237 (246)
Q Consensus 199 yPCapGk~YyGRGpIQLSWNYNYg~fs~~v~~~k~~~~~ 237 (246)
|||.+|++|||||||||||||||+++++++ +.+||+
T Consensus 159 ~pcgdG~~Y~GRG~IQLT~~~NY~~~g~~l---g~DLl~ 194 (309)
T 2dkv_A 159 WPCAPGRKYYGRGPIQLSFNFNYGPAGRAI---GVDLLS 194 (309)
T ss_dssp SCCCTTCCCCCBTTTTBCSHHHHHHHHHHH---TSCTTT
T ss_pred cccCCCCeeecCCcccccchhhHHHHHHHh---CCcccc
Confidence 999999999999999999999999999765 345553
No 2
>3w3e_A Cotyledoneous yieldin-like protein; alpha helical protein, hydrolase, family 19 glycosidase, REG protein of the cell WALL yield threshold; 1.50A {Vigna unguiculata} PDB: 1dxj_A
Probab=100.00 E-value=1.2e-55 Score=394.01 Aligned_cols=130 Identities=32% Similarity=0.636 Sum_probs=126.3
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCC
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGG 172 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~G 172 (246)
+|++|||+++||+||||||++.||++|||||++||+|+++|| +|++||+++++||||||||||++|||+|||++||+|
T Consensus 2 ~v~~ivt~~~f~~~~~~rn~~~c~~~~fYty~~fi~Aa~~fp--~F~~tg~~~~~krElAaFlA~~~hET~gg~~~a~~g 79 (242)
T 3w3e_A 2 EVGSVIGASLFDQLLKHRNDQACEGKGFYSYNAFITAARSFA--AFGTTGDSNTRKREVAAFLAQTSHETTGGAATSPDG 79 (242)
T ss_dssp CGGGTSCHHHHHHHTTTTTSTTSSCTTCSCHHHHHHHHHTST--TTTCSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTC
T ss_pred chHhhCCHHHHHHHhhccCCCCCCCCCcccHHHHHHHHHhhh--hhcCCCCchhhHHHHHHHHhhcccccCCCcccCCCC
Confidence 589999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CccccceeeeecCCCCCCcCCCCCCCCCCCCCCccccCCCCcccccchhHHHHHHH
Q 036277 173 PLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWYACTFYIFIIV 228 (246)
Q Consensus 173 p~aWGlcy~eEi~~~~~YC~~s~~~~yPCapGk~YyGRGpIQLSWNYNYg~fs~~v 228 (246)
||+|||||+||+++..+||+ .+|||++|++|||||||||||||||+++++++
T Consensus 80 ~~~wg~~~~~E~~~~~~YC~----~~~Pc~dG~~Y~GRG~IQLTg~~NY~~~g~~l 131 (242)
T 3w3e_A 80 PYAWGYCFVTERDKSNRYCD----GSGPCSAGKSYYGRGPIQLTHNYNYNAAGRAL 131 (242)
T ss_dssp GGGCTTCCSBCSCCSCCCCC----SSSCCCTTCCCCCBTTTTBCSHHHHHHHHHHH
T ss_pred ccceEEEEeecccCcccccc----cCCCCCCCCceecCCcccCCcHHHHHHHHHHh
Confidence 99999999999998889998 26999999999999999999999999999765
No 3
>3cql_A Endochitinase; glycosyl hydrolase, N-acetyl-D-glucosamine, carbo metabolism, chitin degradation, chitin-binding, glycosidase hydrolase; HET: NDG NAG; 1.50A {Carica papaya} PDB: 1cns_A 2baa_A
Probab=100.00 E-value=7.2e-54 Score=382.39 Aligned_cols=132 Identities=37% Similarity=0.732 Sum_probs=127.6
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCC
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGG 172 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~G 172 (246)
+|++|||+++||+||||||++.||++|||||++||+|+++|| +|++||+++++||||||||||++|||+|||+++|+|
T Consensus 1 ~v~~iit~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp--~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~a~~g 78 (243)
T 3cql_A 1 GIEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFIAAAKSFP--SFGTTGSTDVRKREIAAFLGQTSHETTGGWPSAPDG 78 (243)
T ss_dssp CGGGTSCHHHHHHHTTTTTCTTSTTTTTSCHHHHHHHHHTST--TTTCSSCHHHHHHHHHHHHHHHHHHTCCCCTTCTTC
T ss_pred CHhhhcCHHHHHHHHhcccccCCCccCcccHHHHHHHHHhCc--hhccCCCcccCHHHHHHHHhhhheecCCCcccCCCC
Confidence 489999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CccccceeeeecCCCCCCcCCCCCCCCCCCCCCccccCCCCcccccchhHHHHHHH
Q 036277 173 PLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWYACTFYIFIIV 228 (246)
Q Consensus 173 p~aWGlcy~eEi~~~~~YC~~s~~~~yPCapGk~YyGRGpIQLSWNYNYg~fs~~v 228 (246)
||+|||||+||+++...||+.+. +|||.+|++|||||||||||||||+++++++
T Consensus 79 ~~~wg~~~~~E~~~~~~Yc~~~~--~~pc~dG~~Y~GRG~IQLT~n~NY~~~g~~l 132 (243)
T 3cql_A 79 PYAWGYCFLKERNPSSNYCAPSP--RYPCAPGKSYYGRGPIQLSWNYNYGPCGEAL 132 (243)
T ss_dssp GGGCTTCCSBCSSCSSCCCCCCS--SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHH
T ss_pred cccccceEEeeecCCCCccCCCC--CccCCCCCeeecCCccccchhHHHHHHHHHh
Confidence 99999999999998889999874 7999999999999999999999999999765
No 4
>2z37_A Chitinase; family 19, conformational changes, hydrolase; 1.53A {Brassica juncea} PDB: 2z38_A 2z39_A
Probab=100.00 E-value=5e-53 Score=377.03 Aligned_cols=139 Identities=34% Similarity=0.625 Sum_probs=131.0
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCC
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGG 172 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~G 172 (246)
+|++|||+++||+||||||++.||+++||||++||+|+++|| +|++||+++++||||||||||++|||+|||+++|+|
T Consensus 1 ~v~~iit~~~f~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp--~f~~~g~~~~~kreiAaFlAq~~HET~gg~~~a~~g 78 (244)
T 2z37_A 1 DLSGIISRDQFYKMLKHMNDNDCHAVGFFTYDAFITAAKSFP--SFGNTGDLAMRKKEIAAFFGQTSHETTGGWSGAPDG 78 (244)
T ss_dssp CGGGTSCHHHHHHHTTTTTSTTSSSTTTSCHHHHHHHHTTST--TTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTSTTC
T ss_pred ChhhhCCHHHHHHHHhccCccCCcccCcCcHHHHHHHHHHhh--hhccCCCccccHHHHHHHHhhheeecCCccccCCCC
Confidence 489999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CccccceeeeecCCCCCCcCCCCCCCCCCCCCCccccCCCCcccccchhHHHHHHHHhhhhhccc
Q 036277 173 PLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWYACTFYIFIIVLLFKFQLLD 237 (246)
Q Consensus 173 p~aWGlcy~eEi~~~~~YC~~s~~~~yPCapGk~YyGRGpIQLSWNYNYg~fs~~v~~~k~~~~~ 237 (246)
||+|||||+||+++...||+.+.+ +|||.+|++|||||||||||||||+++++++ +.+||+
T Consensus 79 ~~~wg~~~~~E~~~~~~Yc~~~~~-~~pc~dG~~Y~GRG~IQLT~~~NY~~~g~~l---g~dLl~ 139 (244)
T 2z37_A 79 ANTWGYCYKEEIDKSDPHCDSNNL-EWPCAPGKFYYGRGPMMLSWNYNYGPCGRDL---GLELLK 139 (244)
T ss_dssp GGGCTTCCSBCSCCCCCCCCTTCS-SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHH---TSCTTT
T ss_pred cccccceEeeeecCCcCCcCcCcC-CcccCCCCeeecCCccccchHHHHHHHHHHh---CCcccc
Confidence 999999999999988899998753 6999999999999999999999999999765 345554
No 5
>1dxj_A Class II chitinase; hydrolase, family 19 glycosidase, alpha helical protein; 1.8A {Canavalia ensiformis} SCOP: d.2.1.1
Probab=100.00 E-value=1.8e-51 Score=366.59 Aligned_cols=136 Identities=32% Similarity=0.667 Sum_probs=128.1
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCC
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGG 172 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~G 172 (246)
+|++|||+++||+||||||++.||++|||||++||+|+++|| +|++||+++++||||||||||++|||+|||.++|++
T Consensus 1 ~v~~~it~~~F~~~~~~~~~~~c~~~~fyty~~fi~A~~~fp--~f~~~g~~~~~kreiAaFlAq~~hET~gg~~~~~~~ 78 (242)
T 1dxj_A 1 DVGSVIDASLFDQLLKHRNDPACEGKGFYSYNAFVTAARSFG--GFGTTGDTNTRKREVAAFLAQTSHETTGGAAGSPDG 78 (242)
T ss_dssp CGGGTSCHHHHHHHTTTTTCTTSSCSSCSCHHHHHHHHTTST--TTTTSSSHHHHHHHHHHHHHHHHHHTCCCCTTCTTC
T ss_pred CHHHhcCHHHHHHHHhccCccCCCccCcccHHHHHHHHHhCc--hhccCCCcccCHHHHHHHHhhhheecCCCcccCCCC
Confidence 489999999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CccccceeeeecCCCCCCcCCCCCCCCCCCCCCccccCCCCcccccchhHHHHHHHHhhhhhccc
Q 036277 173 PLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWYACTFYIFIIVLLFKFQLLD 237 (246)
Q Consensus 173 p~aWGlcy~eEi~~~~~YC~~s~~~~yPCapGk~YyGRGpIQLSWNYNYg~fs~~v~~~k~~~~~ 237 (246)
||+|||||++|+++...||+.+. ||.+|++|||||||||||||||+++++++ +.+||+
T Consensus 79 ~y~wG~~~~~E~~~~~~Yc~~~~----pc~dG~~Y~GRG~IQLT~~~NY~~~g~~l---g~dLl~ 136 (242)
T 1dxj_A 79 PYAWGYCFVTERDKSNKYCDPGT----PCPAGKSYYGRGPIQLTHNYNYAQAGRAL---GVDLIN 136 (242)
T ss_dssp GGGCTTCCSBCSCCCCCCCCTTS----CCCTTCCCCCBTTTTBCSHHHHHHHHHHH---TSCTTT
T ss_pred cccccceeeeccCCCcccCcCCC----CCCCCCceecCCceecccHHHHHHHHHHh---CCcccc
Confidence 99999999999998889999752 99999999999999999999999999765 345554
No 6
>3hbe_X Class IV chitinase CHIA4-PA2; endochitinase, family 19, conformational changes, chitin-binding, glycosidase, hydrolase; 1.55A {Picea abies} SCOP: d.2.1.0 PDB: 3hbd_A 3hbh_A
Probab=100.00 E-value=2e-47 Score=333.91 Aligned_cols=118 Identities=34% Similarity=0.633 Sum_probs=112.1
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCC
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGG 172 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~G 172 (246)
+|++|||+++||+||||| ++.||+||||||++||+|+++|| +|++||+++++||||||||||++|||+
T Consensus 1 ~v~~ivt~~~f~~~~~~~-~~~c~~~~fYty~~fi~Aa~~fp--~F~~~g~~~~~kreiAaFlAq~~hETg--------- 68 (204)
T 3hbe_X 1 SVGGIISQSFFNGLAGGA-ASSCEGKGFYTYNAFIAAANAYS--GFGTTGSNDVKKRELAAFFANVMHETG--------- 68 (204)
T ss_dssp CHHHHSCHHHHHHHHHTS-CTTCTTTTTSCHHHHHHHHHTST--TTTTSSSHHHHHHHHHHHHHHHHHHHT---------
T ss_pred CHHHhCCHHHHHHHHcCC-CCCCCCCCcccHHHHHHHHHhcc--hhcCCCCccccHHHHHHHHhhccccCC---------
Confidence 489999999999999999 55799999999999999999999 999999999999999999999999999
Q ss_pred CccccceeeeecCCCCCCcCCCCCCCCCCCCCCccccCCCCcccccchhHHHHHHH
Q 036277 173 PLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWYACTFYIFIIV 228 (246)
Q Consensus 173 p~aWGlcy~eEi~~~~~YC~~s~~~~yPCapGk~YyGRGpIQLSWNYNYg~fs~~v 228 (246)
||||+||+++...||+.++ +|||.+|++|||||||||||||||+++++++
T Consensus 69 ----g~~~~~E~~~~~~Ycd~~~--~~pcgdG~~Y~GRG~IQLTg~~NY~~~g~~l 118 (204)
T 3hbe_X 69 ----GLCYINEKNPPINYCQSSS--TWPCTSGKSYHGRGPLQLSWNYNYGAAGKSI 118 (204)
T ss_dssp ----TTTCSBCSSCSSCCCCCCS--SSCCCTTCCCCCBTTTTBCSHHHHHHHHHHH
T ss_pred ----CcEEEEeccCCCCccCCCC--CCCCCCCCcccCCCceecccHHHHHHHHHHh
Confidence 8999999998789999865 7999999999999999999999999999775
No 7
>2cjl_A Chitinase G, secreted chitinase; hydrolase, plant enzymes; 1.5A {Streptomyces coelicolor}
Probab=100.00 E-value=1.2e-37 Score=270.04 Aligned_cols=109 Identities=36% Similarity=0.636 Sum_probs=100.9
Q ss_pred cccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCCCCcc
Q 036277 96 DYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLA 175 (246)
Q Consensus 96 siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~Gp~a 175 (246)
+|||+++|++|||+|+. ||||++|++|+++|| +|++||+++++|||+||||||++|||+
T Consensus 1 ~~it~~~f~~i~~~~~~-------fyt~~~~~~A~~~y~--~f~~~g~~~~~~~e~AaFlAq~~hETg------------ 59 (204)
T 2cjl_A 1 FVVSEAQFDQMFPSRNS-------FYTYSGLTAALSAYP--GFSNTGSDTVKKQEAAAFLANVGHETG------------ 59 (204)
T ss_dssp CCSCHHHHHHHCTTCCT-------TSCHHHHHHHGGGCT--TTTCSSCHHHHHHHHHHHHHHHHHHHT------------
T ss_pred CcCCHHHHHHHhccCCc-------cccHHHHHHHHHHhh--hhccCCCCcCCHHHHHHHHhHHHHHcC------------
Confidence 58999999999999974 999999999999999 999999999999999999999999998
Q ss_pred ccceeeeecCCC--CCCcCCCCCCCCCCCCCC-ccccCCCCcccccchhHHHHHHH
Q 036277 176 WGLCYNHEMSPS--QSYCDDSYKYTYPCTPGA-EYYGRGAIPIYWYACTFYIFIIV 228 (246)
Q Consensus 176 WGlcy~eEi~~~--~~YC~~s~~~~yPCapGk-~YyGRGpIQLSWNYNYg~fs~~v 228 (246)
||||++|+++. ..||+.+. .|||.+|+ +|||||||||||||||+++++++
T Consensus 60 -g~~~~~E~~~~~y~~~c~~~~--~y~~~~g~~~Y~GRG~iQLT~~~NY~~~g~~l 112 (204)
T 2cjl_A 60 -GLVYVVEQNTANYPHYCDASQ--PYGCPAGNDKYYGRGPVQLSWNFNYKAAGDAL 112 (204)
T ss_dssp -TTTCSBCSCGGGGGGGCCTTS--TTCCTTCTTCCCCBTTTTBCSHHHHHHHHHHH
T ss_pred -CCcceeecCCCcCccccCCCC--CCCCCCCCccccCCChHHHhHHHHHHHHHHHh
Confidence 89999999864 38999863 69999995 99999999999999999999765
No 8
>1wvv_A Chitinase C; family 19 chitinase, whole structure, hydrolase; 2.00A {Streptomyces griseus} PDB: 1wvu_A 2dbt_A* 2d49_A
Probab=100.00 E-value=3.6e-37 Score=276.55 Aligned_cols=113 Identities=33% Similarity=0.577 Sum_probs=104.8
Q ss_pred CCcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCCCCccccCCcchhhhHHHHHHhhhhccCCCCccccCC
Q 036277 92 ETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATG 171 (246)
Q Consensus 92 ~~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~~~FgttG~~~~~KRElAAFLAhvshET~gGw~~Ap~ 171 (246)
++|++|||+++|++|||+|+. ||||++|++|+++|| +|+++|+++++|||+||||||++|||+
T Consensus 58 ~~v~~~it~~~f~~i~~~~~~-------fyty~~~~~A~~~f~--~f~~~g~~~~~~~e~AaFlAq~~hETg-------- 120 (265)
T 1wvv_A 58 GNNGFVVSEAQFNQMFPNRNA-------FYTYKGLTDALSAYP--AFAKTGSDEVKKREAAAFLANVSHQTG-------- 120 (265)
T ss_dssp CCCCCSSCHHHHHHHCTTCCT-------TCCHHHHHHHGGGST--TTTCSSSHHHHHHHHHHHHHHHHHHHT--------
T ss_pred CChhheecHHHHHHHhccccc-------cccHHHHHHHHHhcc--cccccCCcccCHHHHHHHHhHHhHhhc--------
Confidence 479999999999999999973 999999999999999 999999999999999999999999998
Q ss_pred CCccccceeeeecCCC--CCCcCCCCCCCCCCCCCC-ccccCCCCcccccchhHHHHHHH
Q 036277 172 GPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGA-EYYGRGAIPIYWYACTFYIFIIV 228 (246)
Q Consensus 172 Gp~aWGlcy~eEi~~~--~~YC~~s~~~~yPCapGk-~YyGRGpIQLSWNYNYg~fs~~v 228 (246)
||||++|+++. ..||+.+. .|||.+|+ +|||||||||||||||+++++++
T Consensus 121 -----g~~~~~E~~~~~y~~~c~~~~--~~~c~~G~~~Y~GRG~IQLT~~~NY~~~g~~l 173 (265)
T 1wvv_A 121 -----GLFYIKEVNEANYPHYCDTTQ--SYGCPAGQAAYYGRGPIQLSWNFNYKAAGDAL 173 (265)
T ss_dssp -----TTTCSBCSCGGGGGGGCCTTS--TTCCTTCTTCCSCBTTTTBCSHHHHHHHHHHH
T ss_pred -----cceeeEecCCCCCccccccCC--CCCCCCccccccCCCchhhhhHHHHHHHHHHh
Confidence 89999999865 37999863 69999995 99999999999999999999765
No 9
>1wkx_A Hevein isoform 2; allergen, lectin, agglutinin-toxin motif; 1.70A {Hevea brasiliensis} PDB: 1hev_A 1q9b_A*
Probab=96.54 E-value=0.00051 Score=46.89 Aligned_cols=24 Identities=25% Similarity=0.729 Sum_probs=20.2
Q ss_pred eEEeecCCcCCCCCCCCCCCccccC
Q 036277 66 IVKKVKGKKVCIKGWECPTWSKFCC 90 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~~~YCc 90 (246)
.+++|+|++.||.++|||+| .||+
T Consensus 2 ~CG~~~gg~~Cp~~~CCS~~-G~CG 25 (43)
T 1wkx_A 2 QCGRQAGGKLCPDNLCCSQW-GWCG 25 (43)
T ss_dssp CSBGGGTTBCCSTTCEECTT-SCEE
T ss_pred CcCCCCCCCcCCCCCccCcc-CccC
Confidence 36789999999999999998 5554
No 10
>2kus_A SM-AMP-1.1A; plant antimicrobial peptide, chitin-binding peptide, antimic protein; NMR {Stellaria media}
Probab=96.03 E-value=0.00084 Score=44.01 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=19.5
Q ss_pred ceeEEeecCCcCCCCCCCCCCCccccCC
Q 036277 64 KVIVKKVKGKKVCIKGWECPTWSKFCCN 91 (246)
Q Consensus 64 ~~~~~~~ag~a~C~~g~cCs~~~~YCc~ 91 (246)
...++.|+|+ ||+++|||+| .||+.
T Consensus 4 ~~~CG~~~g~--C~~g~CCS~~-G~CG~ 28 (35)
T 2kus_A 4 NGQCGPGWGG--CRGGLCCSQY-GYCGS 28 (35)
T ss_dssp TCBCBTTTBC--CCTTCEECTT-SBEEC
T ss_pred ccccCCCCCc--cCCCCccCCC-ccccC
Confidence 3467888874 9999999998 66654
No 11
>2lb7_A WAMP-1A, antimicrobial peptide 1A; antimicrobial protein; NMR {Triticum kiharae}
Probab=95.95 E-value=0.0011 Score=45.52 Aligned_cols=23 Identities=17% Similarity=0.384 Sum_probs=19.8
Q ss_pred eEEeecCCcCCCCCCCCCCCcccc
Q 036277 66 IVKKVKGKKVCIKGWECPTWSKFC 89 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~~~YC 89 (246)
.++.|++++.||+++|||+| .||
T Consensus 3 ~CG~~~~g~~C~~g~CCS~~-G~C 25 (44)
T 2lb7_A 3 RCGDQARGAKCPNCLCCGKY-GFC 25 (44)
T ss_dssp ECBGGGTTBCCCTTCEEETT-TEE
T ss_pred CccCCCCCccCCCCCccCCC-Ccc
Confidence 57889999999999999997 444
No 12
>1mmc_A AC-AMP2, antimicrobial peptide 2; antifungal antimicrobial, chitin-binding; NMR {Amaranthus caudatus} SCOP: g.3.1.2 PDB: 1zuv_A 1zwu_A* 1znt_A*
Probab=95.03 E-value=0.0067 Score=38.56 Aligned_cols=20 Identities=20% Similarity=0.582 Sum_probs=16.0
Q ss_pred cCCcCCCCCCCCCCCccccCC
Q 036277 71 KGKKVCIKGWECPTWSKFCCN 91 (246)
Q Consensus 71 ag~a~C~~g~cCs~~~~YCc~ 91 (246)
=|.+.||.++|||+| .||+.
T Consensus 4 Cg~~~Cp~~~CCS~~-G~CGt 23 (30)
T 1mmc_A 4 CVRGRCPSGMCCSQF-GYCGK 23 (30)
T ss_dssp CSSSCCSTTCEECTT-SCEES
T ss_pred cCCCcCCCCCCCCCC-CcccC
Confidence 356889999999998 67654
No 13
>1p9g_A EAFP 2; antifungal peptide, atomic resolution, antifungal protein; HET: PCA; 0.84A {Eucommia ulmoides} SCOP: g.3.1.1 PDB: 1p9z_A*
Probab=91.76 E-value=0.043 Score=37.04 Aligned_cols=19 Identities=21% Similarity=0.721 Sum_probs=14.3
Q ss_pred cCCcCCCCCCCCCCCccccC
Q 036277 71 KGKKVCIKGWECPTWSKFCC 90 (246)
Q Consensus 71 ag~a~C~~g~cCs~~~~YCc 90 (246)
.-++.||+++|||+| .||+
T Consensus 6 ~CG~~C~~g~CCS~~-G~CG 24 (41)
T 1p9g_A 6 RCPRPCNAGLCCSIY-GYCG 24 (41)
T ss_dssp GTTCCSCTTCEEETT-SCEE
T ss_pred hcCCCCCCCCCCCCC-Cccc
Confidence 335889999999997 4443
No 14
>1en2_A UDA, agglutinin isolectin I/agglutinin isolectin V/ AG isolectin VI; hevein domain, superantigen, saccharide binding binding protein; HET: NAG; 1.40A {Urtica dioica} SCOP: g.3.1.1 g.3.1.1 PDB: 1eis_A* 1enm_A* 1ehd_A 1ehh_A* 1iqb_A
Probab=91.05 E-value=0.019 Score=44.42 Aligned_cols=20 Identities=20% Similarity=0.400 Sum_probs=18.1
Q ss_pred eEEeecCCcCCCCCCCCCCC
Q 036277 66 IVKKVKGKKVCIKGWECPTW 85 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~ 85 (246)
.+++|++++.||+++|||+|
T Consensus 2 ~CG~~~~g~~C~~g~CCS~~ 21 (89)
T 1en2_A 2 RCGSQGGGSTCPGLRCCSIW 21 (89)
T ss_dssp BCTTTTTSCCCGGGCEEETT
T ss_pred ccCCCCCCCcCCCCCccCCC
Confidence 46789999999999999997
No 15
>1uha_A Lectin-D2; chitin-binding domain, sugar binding protein; 1.50A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 PDB: 1ulm_A* 1uln_A
Probab=89.99 E-value=0.036 Score=42.18 Aligned_cols=20 Identities=25% Similarity=0.524 Sum_probs=18.2
Q ss_pred eEEeecCCcCCCCCCCCCCC
Q 036277 66 IVKKVKGKKVCIKGWECPTW 85 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~ 85 (246)
.++++++++.||+++|||+|
T Consensus 3 ~CG~~~~~~~C~~g~CCS~~ 22 (82)
T 1uha_A 3 ECGERASGKRCPNGKCCSQW 22 (82)
T ss_dssp CSBGGGTTBCCGGGCEECTT
T ss_pred cccCCCCCCCCCCCCccCCC
Confidence 46788999999999999997
No 16
>1ulk_A Lectin-C; chitin-binding protein, hevein domain, PL-C, sugar binding protein; 1.80A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 g.3.1.1
Probab=87.56 E-value=0.084 Score=43.08 Aligned_cols=30 Identities=23% Similarity=0.692 Sum_probs=23.4
Q ss_pred eEEeecCCcCCCCCCCCCCC------ccccCCCCcc
Q 036277 66 IVKKVKGKKVCIKGWECPTW------SKFCCNETIS 95 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~------~~YCc~~~V~ 95 (246)
.+++|++++.|++++|||+| ++||+..-++
T Consensus 3 ~CG~~~~g~~C~~g~CCS~~G~CG~~~~yCg~gC~s 38 (126)
T 1ulk_A 3 VCGVRASGRVCPDGYCCSQWGYCGTTEEYCGKGCQS 38 (126)
T ss_dssp CSBGGGTTBCCGGGCEECTTSCEESSHHHHSTTCCB
T ss_pred ccCCCCCCCcCCCCCccCCCCCcCcChhhhcccccc
Confidence 57889999999999999997 5566543333
No 17
>1uha_A Lectin-D2; chitin-binding domain, sugar binding protein; 1.50A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 PDB: 1ulm_A* 1uln_A
Probab=84.60 E-value=0.25 Score=37.49 Aligned_cols=24 Identities=17% Similarity=0.517 Sum_probs=20.4
Q ss_pred eEEeecCCcCCCCCCCCCCCccccC
Q 036277 66 IVKKVKGKKVCIKGWECPTWSKFCC 90 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~~~YCc 90 (246)
.++++++++.|+.++|||+| .||+
T Consensus 44 ~CG~~~~g~~C~~~~CCS~~-G~CG 67 (82)
T 1uha_A 44 RCGRDFGGRLCEEDMCCSKY-GWCG 67 (82)
T ss_dssp BCBGGGTTBCCSTTCEECTT-SBEE
T ss_pred ccCCccccccCCCCCeeCCC-CeEC
Confidence 57888999999999999997 5554
No 18
>1en2_A UDA, agglutinin isolectin I/agglutinin isolectin V/ AG isolectin VI; hevein domain, superantigen, saccharide binding binding protein; HET: NAG; 1.40A {Urtica dioica} SCOP: g.3.1.1 g.3.1.1 PDB: 1eis_A* 1enm_A* 1ehd_A 1ehh_A* 1iqb_A
Probab=82.27 E-value=0.31 Score=37.56 Aligned_cols=26 Identities=15% Similarity=0.323 Sum_probs=21.5
Q ss_pred ceeEEeecCCcCCCCCCCCCCCccccC
Q 036277 64 KVIVKKVKGKKVCIKGWECPTWSKFCC 90 (246)
Q Consensus 64 ~~~~~~~ag~a~C~~g~cCs~~~~YCc 90 (246)
...++.+++++.||.++|||+| .||+
T Consensus 46 d~~CG~~~g~~~C~~g~CCS~~-G~CG 71 (89)
T 1en2_A 46 DHRCGAAVGNPPCGQDRCCSVH-GWCG 71 (89)
T ss_dssp TCBCSGGGTCCCCCTTCEEETT-SBEE
T ss_pred ccccccccCCccCCCCCeeCCC-CccC
Confidence 3467888999999999999997 5554
No 19
>1ulk_A Lectin-C; chitin-binding protein, hevein domain, PL-C, sugar binding protein; 1.80A {Phytolacca americana} SCOP: g.3.1.1 g.3.1.1 g.3.1.1
Probab=80.20 E-value=0.33 Score=39.56 Aligned_cols=25 Identities=20% Similarity=0.496 Sum_probs=20.6
Q ss_pred eeEEeecCCcCCCCCCCCCCCccccC
Q 036277 65 VIVKKVKGKKVCIKGWECPTWSKFCC 90 (246)
Q Consensus 65 ~~~~~~ag~a~C~~g~cCs~~~~YCc 90 (246)
..++++++++.|++++|||+| .||+
T Consensus 84 g~CG~~~gg~~C~~~~CCS~~-G~CG 108 (126)
T 1ulk_A 84 WRCGKDFGGRLCTEDMCCSQY-GWCG 108 (126)
T ss_dssp TBCBGGGTTBCCSTTCEECTT-SBEE
T ss_pred ccccccCCCCcCCCCCccCCC-CcCC
Confidence 357888999999999999997 4443
No 20
>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A*
Probab=71.32 E-value=0.57 Score=39.84 Aligned_cols=27 Identities=11% Similarity=0.383 Sum_probs=21.7
Q ss_pred eEEeecCCcCCCCCCCCCCC------ccccCCC
Q 036277 66 IVKKVKGKKVCIKGWECPTW------SKFCCNE 92 (246)
Q Consensus 66 ~~~~~ag~a~C~~g~cCs~~------~~YCc~~ 92 (246)
.++.|+++++||.+.|||+| ++||...
T Consensus 2 ~CG~~~~~~~C~~g~CCS~~G~CG~t~~yCg~g 34 (171)
T 2uvo_A 2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKG 34 (171)
T ss_dssp BCBGGGTTBBCGGGCEECTTSBEEBSHHHHSTT
T ss_pred CcCCCCCCCcCCCCCccCCCceeCCCchhhccC
Confidence 35788999999999999997 5666543
No 21
>2uvo_A Agglutinin isolectin 1; carbohydrate-binding protein, hevein domain, chitin-binding, GERM agglutinin, chitin-binding protein; HET: NDG NAG GOL; 1.40A {Triticum aestivum} PDB: 1wgc_A* 2cwg_A* 2uwg_A* 2x3t_A* 4aml_A* 7wga_A 9wga_A 2wgc_A 1wgt_A 1k7t_A* 1k7v_A* 1k7u_A 2uwz_A* 2x52_A* 1t0w_A*
Probab=69.65 E-value=1.1 Score=38.11 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=19.1
Q ss_pred eeEEeecCCcCCCCCCCCCCC
Q 036277 65 VIVKKVKGKKVCIKGWECPTW 85 (246)
Q Consensus 65 ~~~~~~ag~a~C~~g~cCs~~ 85 (246)
..++.|++++.|++++|||+|
T Consensus 44 ~~CG~~~gg~~C~~g~CCS~~ 64 (171)
T 2uvo_A 44 KRCGSQAGGATCTNNQCCSQY 64 (171)
T ss_dssp CBCBGGGTTBCCSTTCEECTT
T ss_pred cCCCCcCCCCcCCCCcccCCC
Confidence 468889999999999999997
No 22
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=53.18 E-value=13 Score=26.11 Aligned_cols=61 Identities=11% Similarity=0.127 Sum_probs=40.7
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCC---------CCccccCCcchhhhHHHHHHhhh
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQP---------LGFGTTGTKLDKMKEICAFLAHV 158 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~---------~~FgttG~~~~~KRElAAFLAhv 158 (246)
+++..+|+++.++|+..-+. .|.-+|+.|+.+...-.. ..|-..|+-...+.|+...+..+
T Consensus 1 sl~~~~s~~ei~~~~~~~d~-----~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 70 (109)
T 5pal_A 1 PMTKVLKADDINKAISAFKD-----PGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGF 70 (109)
T ss_dssp CGGGTSCHHHHHHHHHHTCS-----TTCCCHHHHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHH
T ss_pred CCCCcCCHHHHHHHHHHhCC-----CCcCcHHHHHHHHhhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 36778999999999986643 467899999988653110 03444455555677777776655
No 23
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=36.73 E-value=30 Score=24.18 Aligned_cols=60 Identities=18% Similarity=0.234 Sum_probs=37.3
Q ss_pred cccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCC---------CCccccCCcchhhhHHHHHHhhh
Q 036277 94 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQP---------LGFGTTGTKLDKMKEICAFLAHV 158 (246)
Q Consensus 94 V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~---------~~FgttG~~~~~KRElAAFLAhv 158 (246)
++..+|+++.++||..-+ +.|.-+|+.|+.++..-+. ..|-..|+-...+.|+...+...
T Consensus 3 l~~~~~~~ei~~~~~~~D-----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~ 71 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ-----AADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNF 71 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC-----STTCCCHHHHHHHHTCTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGT
T ss_pred ccCcCCHHHHHHHHHhcC-----CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHH
Confidence 556789999999998664 3567899999988753210 02333344444555655555444
No 24
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=33.26 E-value=59 Score=22.53 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=39.0
Q ss_pred cccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhc-----------cCCCCccccCCcchhhhHHHHHHhhh
Q 036277 94 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVK-----------YQPLGFGTTGTKLDKMKEICAFLAHV 158 (246)
Q Consensus 94 V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~-----------Fp~~~FgttG~~~~~KRElAAFLAhv 158 (246)
+..-+|+++.++||..-+ +.|.-+|+.|+.+... |. .|-..|+-...+.|+...+..+
T Consensus 2 l~~~~~~~e~~~l~~~~d-----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~--~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ-----APDSFSPKKFFQISGMSKKSSSQLKEIFR--ILDNDQSGFIEEDELKYFLQRF 70 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC-----STTTCCHHHHHHHHTCTTCCSSSHHHHCS--SSCSCCSSCCCGGGTTTSHHHH
T ss_pred ccccCCHHHHHHHHHHcC-----CCCcCCHHHHHHHHhhCcccHHHHHHHHH--HhCCCCCCeEcHHHHHHHHHHH
Confidence 345689999999997654 3567899999987642 33 4444455555667776666655
No 25
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=28.07 E-value=60 Score=22.45 Aligned_cols=56 Identities=11% Similarity=0.143 Sum_probs=36.9
Q ss_pred cccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhc-----------cCCCCccccCCcchhhhHHHHHHhhh
Q 036277 96 DYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVK-----------YQPLGFGTTGTKLDKMKEICAFLAHV 158 (246)
Q Consensus 96 siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~-----------Fp~~~FgttG~~~~~KRElAAFLAhv 158 (246)
.-+|+++.++||..-+ +.|.-+|+.|+.+... |. .|-..|+-...+.|+..++..+
T Consensus 4 ~~~t~~e~~~~~~~~d-----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~--~~D~d~~G~I~~~el~~~l~~~ 70 (109)
T 1rwy_A 4 DLLSAEDIKKAIGAFT-----AADSFDHKKFFQMVGLKKKSADDVKKVFH--ILDKDKSGFIEEDELGSILKGF 70 (109)
T ss_dssp HHSCHHHHHHHHHTTC-----STTCCCHHHHHHHHTGGGSCHHHHHHHHH--HHSTTCSSEECHHHHHTHHHHH
T ss_pred CcCCHHHHHHHHHHcC-----CCCcEeHHHHHHHHhcCcchHHHHHHHHH--HHCCCCCCeEcHHHHHHHHHHH
Confidence 3578899999997654 3467889999877642 22 3444455455677777776665
No 26
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=27.76 E-value=56 Score=23.22 Aligned_cols=36 Identities=17% Similarity=0.125 Sum_probs=26.4
Q ss_pred ccCHHHHHHHHcCCCCCCc--cCCcccchHHHHHhhhc
Q 036277 97 YFQVYQFENFFSKRNTPVA--HAVGFWDYQSFITATVK 132 (246)
Q Consensus 97 iiT~~~Fd~lfp~Rn~~~c--~a~GFYTY~aFI~AA~~ 132 (246)
-+|+++.+.|+......-. .+.|-++|..|++.+..
T Consensus 34 ~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~~ 71 (75)
T 1h8b_A 34 ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG 71 (75)
T ss_dssp HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHhc
Confidence 4899999999988651101 14578999999987653
No 27
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Probab=26.23 E-value=18 Score=29.47 Aligned_cols=7 Identities=29% Similarity=1.156 Sum_probs=3.1
Q ss_pred cCCCCCC
Q 036277 74 KVCIKGW 80 (246)
Q Consensus 74 a~C~~g~ 80 (246)
..||.||
T Consensus 83 ~~Cp~gW 89 (199)
T 1fm5_A 83 SSCSEDW 89 (199)
T ss_dssp --CCTTS
T ss_pred CCCCCCc
Confidence 4466655
No 28
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=25.89 E-value=62 Score=22.42 Aligned_cols=60 Identities=8% Similarity=0.086 Sum_probs=35.7
Q ss_pred CcccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhhccCC---------CCccccCCcchhhhHHHHHHhhh
Q 036277 93 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQP---------LGFGTTGTKLDKMKEICAFLAHV 158 (246)
Q Consensus 93 ~V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~~Fp~---------~~FgttG~~~~~KRElAAFLAhv 158 (246)
+++. +|+++.++||..-+ +.|.-+|+.|+.++..-+. ..|-..|+-...+.|+...+..+
T Consensus 2 slG~-~~~~e~~~l~~~~d-----~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~ 70 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS-----AADSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNF 70 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC-----STTCCCHHHHHHHHTGGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred CcCC-CCHHHHHHHHHHhC-----CCCcCcHHHHHHHHhCChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 3556 88999999997654 3457889999887643110 02333344344555665555444
No 29
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=23.45 E-value=56 Score=22.64 Aligned_cols=33 Identities=12% Similarity=0.193 Sum_probs=24.5
Q ss_pred cccccCHHHHHHHHcCCCCCCccCCcccchHHHHHhhh
Q 036277 94 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATV 131 (246)
Q Consensus 94 V~siiT~~~Fd~lfp~Rn~~~c~a~GFYTY~aFI~AA~ 131 (246)
+..-+|+++.++||..-+ +.|.-+|+.|+.+..
T Consensus 2 l~~~~t~~e~~~~~~~~d-----~~g~i~~~eF~~~~~ 34 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ-----DPDTFEPQKFFQTSG 34 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC-----STTCCCHHHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcc-----CCCCcCHHHHHHHHh
Confidence 345678899999987654 346789999988764
Done!