Query 036281
Match_columns 371
No_of_seqs 156 out of 1564
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 19:10:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036281.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036281hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 99.1 5.9E-08 2E-12 87.7 26.8 193 123-349 91-295 (308)
2 3ii7_A Kelch-like protein 7; p 99.1 3.2E-08 1.1E-12 89.2 23.3 210 107-349 49-280 (306)
3 2e31_A FBS1, F-box only protei 99.1 3E-11 1E-15 107.1 2.2 51 8-58 49-100 (297)
4 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.5E-11 1.2E-15 78.6 1.6 46 6-51 5-50 (53)
5 2vpj_A Kelch-like protein 12; 99.0 9.2E-08 3.1E-12 85.9 24.0 208 107-348 56-285 (301)
6 2woz_A Kelch repeat and BTB do 99.0 1.2E-07 4.2E-12 86.0 24.6 191 126-347 81-293 (318)
7 2xn4_A Kelch-like protein 2; s 99.0 1.1E-07 3.8E-12 85.5 23.9 207 108-348 56-283 (302)
8 4asc_A Kelch repeat and BTB do 99.0 9.8E-08 3.3E-12 86.5 22.7 192 126-347 70-283 (315)
9 2uvk_A YJHT; unknown function, 98.9 1.9E-07 6.4E-12 86.1 19.9 217 108-349 14-302 (357)
10 2vpj_A Kelch-like protein 12; 98.8 6.9E-07 2.4E-11 80.1 21.8 193 122-348 31-238 (301)
11 3ii7_A Kelch-like protein 7; p 98.8 4.6E-07 1.6E-11 81.6 19.6 192 122-348 24-232 (306)
12 2xn4_A Kelch-like protein 2; s 98.8 8.6E-07 2.9E-11 79.6 20.0 192 123-348 31-236 (302)
13 4asc_A Kelch repeat and BTB do 98.8 2.5E-06 8.5E-11 77.1 23.0 200 121-348 12-228 (315)
14 1zgk_A Kelch-like ECH-associat 98.7 6.7E-07 2.3E-11 80.7 18.0 197 122-348 39-247 (308)
15 2zwa_A Leucine carboxyl methyl 98.7 2E-06 6.7E-11 86.6 21.4 200 123-350 413-644 (695)
16 2ovr_B FBW7, F-BOX/WD repeat p 98.6 3.8E-05 1.3E-09 72.5 27.4 50 8-57 17-66 (445)
17 2woz_A Kelch repeat and BTB do 98.6 7.4E-06 2.5E-10 74.1 20.6 206 115-348 17-238 (318)
18 3v7d_B Cell division control p 98.5 3.4E-05 1.1E-09 73.2 24.7 44 9-52 14-58 (464)
19 2uvk_A YJHT; unknown function, 98.5 3.3E-05 1.1E-09 70.8 21.6 148 186-347 167-348 (357)
20 1p22_A F-BOX/WD-repeat protein 98.4 7.1E-06 2.4E-10 77.4 15.8 49 7-55 8-60 (435)
21 1k3i_A Galactose oxidase precu 97.6 0.00041 1.4E-08 69.2 13.0 216 111-348 251-504 (656)
22 3l2o_B F-box only protein 4; s 97.6 1.2E-05 4E-10 70.6 1.0 49 10-58 5-53 (312)
23 1k3i_A Galactose oxidase precu 97.6 0.0014 4.7E-08 65.4 16.2 193 125-348 221-448 (656)
24 2zwa_A Leucine carboxyl methyl 97.5 0.0017 5.7E-08 65.3 14.9 152 186-349 411-591 (695)
25 2ast_B S-phase kinase-associat 97.4 3.1E-05 1.1E-09 70.3 0.9 44 6-49 5-48 (336)
26 2p1m_B Transport inhibitor res 96.6 0.00034 1.2E-08 68.6 0.1 36 8-43 4-40 (594)
27 3ogk_B Coronatine-insensitive 96.2 0.00072 2.5E-08 66.3 -0.2 34 10-43 13-47 (592)
28 2z2n_A Virginiamycin B lyase; 93.5 3.2 0.00011 35.4 18.9 191 108-345 104-299 (299)
29 3jrp_A Fusion protein of prote 92.7 4.9 0.00017 35.4 19.3 65 276-342 171-241 (379)
30 4gga_A P55CDC, cell division c 92.7 5.9 0.0002 36.2 17.2 195 111-347 114-316 (420)
31 3jro_A Fusion protein of prote 91.5 7.8 0.00027 38.8 17.3 65 277-343 170-240 (753)
32 3q7m_A Lipoprotein YFGL, BAMB; 88.2 9 0.00031 34.2 13.6 118 216-347 47-168 (376)
33 3dsm_A Uncharacterized protein 87.0 15 0.00052 32.2 18.8 145 186-349 63-221 (328)
34 4aez_A CDC20, WD repeat-contai 86.6 18 0.00061 32.6 19.0 188 113-345 104-297 (401)
35 1q7f_A NHL, brain tumor CG1071 84.3 18 0.00061 30.6 20.3 204 108-350 35-247 (286)
36 3hfq_A Uncharacterized protein 82.6 24 0.00081 30.7 16.7 73 275-349 249-327 (347)
37 1q7f_A NHL, brain tumor CG1071 81.7 23 0.00078 29.9 21.9 188 111-341 86-280 (286)
38 3g4e_A Regucalcin; six bladed 81.4 25 0.00085 30.1 16.9 195 113-350 24-239 (297)
39 3hfq_A Uncharacterized protein 81.2 12 0.00041 32.7 10.8 103 236-347 18-124 (347)
40 3q7m_A Lipoprotein YFGL, BAMB; 80.7 30 0.001 30.6 14.6 112 216-348 97-214 (376)
41 4e54_B DNA damage-binding prot 79.4 16 0.00054 33.4 11.3 58 287-344 271-330 (435)
42 2qc5_A Streptogramin B lactona 79.3 27 0.00093 29.3 13.7 110 222-349 30-141 (300)
43 2z2n_A Virginiamycin B lyase; 78.5 29 0.00098 29.1 14.0 109 222-350 151-263 (299)
44 3ei3_B DNA damage-binding prot 78.4 35 0.0012 30.1 20.5 181 126-344 99-285 (383)
45 2dg1_A DRP35, lactonase; beta 78.3 25 0.00084 30.4 11.8 114 221-347 54-177 (333)
46 3mbr_X Glutamine cyclotransfer 77.3 32 0.0011 29.1 15.7 113 219-349 27-142 (243)
47 3e5z_A Putative gluconolactona 77.0 33 0.0011 29.1 20.8 194 115-350 42-255 (296)
48 1k8k_C P40, ARP2/3 complex 41 76.9 22 0.00074 31.1 11.1 97 236-343 30-129 (372)
49 3scy_A Hypothetical bacterial 76.7 38 0.0013 29.6 14.0 114 222-348 221-346 (361)
50 3nol_A Glutamine cyclotransfer 74.8 40 0.0014 28.9 14.2 113 219-349 49-164 (262)
51 1k8k_C P40, ARP2/3 complex 41 72.9 23 0.00077 31.0 10.1 70 276-347 19-89 (372)
52 4gga_A P55CDC, cell division c 72.2 33 0.0011 31.0 11.3 86 248-345 94-182 (420)
53 2ojh_A Uncharacterized protein 70.9 43 0.0015 27.6 17.9 200 111-348 50-265 (297)
54 3iuj_A Prolyl endopeptidase; h 70.4 84 0.0029 30.8 16.9 115 221-348 290-412 (693)
55 4gqb_B Methylosome protein 50; 68.9 60 0.0021 28.5 17.8 99 236-347 192-295 (344)
56 4e54_B DNA damage-binding prot 67.4 72 0.0025 28.8 15.2 58 287-346 376-435 (435)
57 1r5m_A SIR4-interacting protei 66.5 68 0.0023 28.2 16.1 92 236-340 310-424 (425)
58 1gxr_A ESG1, transducin-like e 66.0 61 0.0021 27.4 14.0 69 276-346 108-177 (337)
59 3sjl_D Methylamine dehydrogena 65.2 81 0.0028 28.6 12.3 127 221-353 236-376 (386)
60 3hrp_A Uncharacterized protein 64.8 82 0.0028 28.5 14.0 110 221-347 140-255 (409)
61 3dsm_A Uncharacterized protein 64.7 70 0.0024 27.7 20.9 192 112-345 52-257 (328)
62 3mmy_A MRNA export factor; mRN 63.9 51 0.0017 28.4 10.5 69 277-347 54-123 (368)
63 4ggc_A P55CDC, cell division c 63.8 65 0.0022 27.0 12.9 59 288-346 44-103 (318)
64 3v65_B Low-density lipoprotein 63.5 84 0.0029 28.2 18.4 187 113-347 87-283 (386)
65 2ad6_A Methanol dehydrogenase 63.4 85 0.0029 30.1 12.5 120 216-347 56-191 (571)
66 3dwl_C Actin-related protein 2 63.1 13 0.00043 33.0 6.2 138 187-342 33-178 (377)
67 1rwi_B Serine/threonine-protei 62.8 63 0.0022 26.5 10.6 106 222-347 77-186 (270)
68 1kv9_A Type II quinohemoprotei 62.5 88 0.003 30.6 12.7 121 216-347 60-193 (668)
69 3mkq_A Coatomer beta'-subunit; 62.5 1.2E+02 0.0042 29.8 20.8 66 276-345 197-263 (814)
70 1pjx_A Dfpase, DIISOPROPYLFLUO 62.5 69 0.0024 27.0 10.9 111 222-347 28-167 (314)
71 3jrp_A Fusion protein of prote 62.2 77 0.0026 27.3 13.9 65 277-343 69-136 (379)
72 3vgz_A Uncharacterized protein 62.0 76 0.0026 27.2 22.5 200 113-346 100-308 (353)
73 1ri6_A Putative isomerase YBHE 61.1 76 0.0026 26.9 20.6 73 275-349 240-318 (343)
74 2mad_H Methylamine dehydrogena 60.8 93 0.0032 27.8 12.9 55 292-347 299-356 (373)
75 4gqb_B Methylosome protein 50; 60.6 78 0.0027 27.7 11.1 60 287-346 101-163 (344)
76 1n7d_A LDL receptor, low-densi 60.6 96 0.0033 30.6 12.6 115 217-347 499-620 (699)
77 2iwa_A Glutamine cyclotransfer 60.5 80 0.0027 27.0 15.1 110 223-349 32-144 (266)
78 1rwi_B Serine/threonine-protei 60.3 70 0.0024 26.2 16.7 185 111-343 75-266 (270)
79 3bws_A Protein LP49; two-domai 60.1 94 0.0032 27.7 13.4 113 222-346 133-248 (433)
80 3bws_A Protein LP49; two-domai 59.4 97 0.0033 27.6 17.2 190 111-347 178-396 (433)
81 3jro_A Fusion protein of prote 58.6 1.3E+02 0.0045 29.7 13.4 96 236-342 31-133 (753)
82 3sfz_A APAF-1, apoptotic pepti 57.8 94 0.0032 32.6 12.8 192 108-343 968-1160(1249)
83 2qc5_A Streptogramin B lactona 57.8 81 0.0028 26.2 19.3 194 107-349 24-225 (300)
84 3f3f_A Nucleoporin SEH1; struc 57.7 85 0.0029 26.4 13.4 65 277-343 71-145 (351)
85 1kb0_A Quinohemoprotein alcoho 57.3 68 0.0023 31.5 10.8 122 216-347 71-205 (677)
86 4aez_A CDC20, WD repeat-contai 57.0 1.1E+02 0.0036 27.2 20.6 99 236-346 284-385 (401)
87 3zwl_B Eukaryotic translation 56.9 93 0.0032 26.6 18.2 69 276-347 186-255 (369)
88 3v9f_A Two-component system se 56.3 1.6E+02 0.0055 29.1 21.1 205 108-348 318-531 (781)
89 3lrv_A PRE-mRNA-splicing facto 56.1 99 0.0034 26.7 11.4 96 236-343 149-246 (343)
90 3e5z_A Putative gluconolactona 55.5 92 0.0032 26.1 12.4 108 222-347 38-167 (296)
91 4aow_A Guanine nucleotide-bind 55.2 96 0.0033 26.3 17.4 55 287-343 275-339 (340)
92 1l0q_A Surface layer protein; 55.2 1.1E+02 0.0037 26.8 17.5 176 122-347 12-195 (391)
93 3u4y_A Uncharacterized protein 54.5 99 0.0034 26.2 16.6 181 122-344 20-210 (331)
94 3m0c_C LDL receptor, low-densi 54.5 1.8E+02 0.0062 29.2 19.6 144 186-351 492-642 (791)
95 4g56_B MGC81050 protein; prote 54.4 1.1E+02 0.0038 26.7 17.2 67 277-347 239-307 (357)
96 1nir_A Nitrite reductase; hemo 54.4 1.3E+02 0.0043 28.6 11.9 114 222-345 334-462 (543)
97 1yiq_A Quinohemoprotein alcoho 54.2 1.2E+02 0.0041 29.8 12.0 121 216-347 64-198 (689)
98 1ri6_A Putative isomerase YBHE 53.9 1E+02 0.0035 26.1 13.0 111 222-347 48-167 (343)
99 4a2l_A BT_4663, two-component 52.0 1.9E+02 0.0064 28.7 21.9 211 108-348 268-487 (795)
100 1l0q_A Surface layer protein; 52.0 1.2E+02 0.0041 26.4 17.4 181 122-347 96-281 (391)
101 2pm9_A Protein WEB1, protein t 51.9 1.2E+02 0.0042 26.5 14.5 64 276-343 274-339 (416)
102 2fp8_A Strictosidine synthase; 51.8 1.1E+02 0.0039 26.1 11.2 122 217-347 22-180 (322)
103 3odt_A Protein DOA1; ubiquitin 51.7 1E+02 0.0035 25.6 19.1 94 236-345 205-300 (313)
104 3dr2_A Exported gluconolactona 50.8 77 0.0026 27.0 9.1 109 222-348 55-185 (305)
105 3fm0_A Protein CIAO1; WDR39,SG 50.1 1.3E+02 0.0043 26.1 13.3 69 276-346 116-186 (345)
106 3vgz_A Uncharacterized protein 49.5 1.2E+02 0.0042 25.8 14.1 123 219-347 96-221 (353)
107 3v65_B Low-density lipoprotein 49.3 1.5E+02 0.005 26.6 15.7 192 110-347 124-325 (386)
108 2ghs_A AGR_C_1268P; regucalcin 49.2 1.3E+02 0.0044 25.9 13.9 104 223-347 61-174 (326)
109 3g4e_A Regucalcin; six bladed 49.2 1.2E+02 0.0041 25.6 15.8 101 222-341 24-139 (297)
110 1evh_A WH1 domain, protein (ME 48.8 19 0.00065 26.4 3.9 39 126-173 14-52 (112)
111 4ggc_A P55CDC, cell division c 48.7 1.2E+02 0.004 25.3 17.8 27 111-138 34-60 (318)
112 1r5m_A SIR4-interacting protei 48.4 1.4E+02 0.0047 26.1 20.0 97 236-347 227-325 (425)
113 1jmx_B Amine dehydrogenase; ox 48.4 1.3E+02 0.0043 25.6 11.3 108 222-343 10-136 (349)
114 3v64_C Agrin; beta propeller, 47.0 1.5E+02 0.0051 26.0 17.7 188 113-347 44-240 (349)
115 3frx_A Guanine nucleotide-bind 46.7 1.1E+02 0.0038 26.1 9.6 65 278-344 31-99 (319)
116 3mmy_A MRNA export factor; mRN 46.4 1.4E+02 0.0047 25.5 18.1 60 286-345 235-308 (368)
117 4a2l_A BT_4663, two-component 46.2 2.3E+02 0.0079 28.0 23.9 211 108-348 220-443 (795)
118 3vl1_A 26S proteasome regulato 44.9 1.3E+02 0.0046 26.4 10.1 69 272-342 341-420 (420)
119 1egx_A VAsp, vasodilator-stimu 44.5 29 0.001 25.5 4.4 40 126-173 14-53 (115)
120 2hes_X YDR267CP; beta-propelle 43.9 1.2E+02 0.0041 26.0 9.4 61 287-347 127-190 (330)
121 3k26_A Polycomb protein EED; W 43.7 1.5E+02 0.0052 25.2 17.7 63 277-341 299-366 (366)
122 3ow8_A WD repeat-containing pr 43.5 1.6E+02 0.0053 25.3 10.5 60 286-345 55-115 (321)
123 2kwv_A RAD30 homolog B, DNA po 42.8 16 0.00054 21.8 2.1 19 8-26 19-37 (48)
124 2pm7_B Protein transport prote 41.7 1.6E+02 0.0053 24.8 11.3 64 277-342 67-133 (297)
125 4g56_B MGC81050 protein; prote 41.7 1.8E+02 0.006 25.4 15.3 53 287-342 290-344 (357)
126 3lrv_A PRE-mRNA-splicing facto 41.5 1.7E+02 0.0058 25.1 11.0 67 276-345 138-205 (343)
127 1npe_A Nidogen, entactin; glyc 41.2 1.5E+02 0.0051 24.4 20.1 193 110-348 44-246 (267)
128 3m0c_C LDL receptor, low-densi 40.9 2.9E+02 0.0099 27.7 18.2 114 217-348 474-596 (791)
129 3u4y_A Uncharacterized protein 40.5 1.7E+02 0.0057 24.7 18.0 111 222-347 186-310 (331)
130 3dwl_C Actin-related protein 2 39.9 24 0.00082 31.0 4.1 66 276-343 22-88 (377)
131 3bg1_A Protein SEC13 homolog; 39.7 1.7E+02 0.006 24.7 14.8 56 286-341 186-247 (316)
132 1yfq_A Cell cycle arrest prote 39.5 1.7E+02 0.0059 24.6 17.8 98 236-345 170-286 (342)
133 3zwl_B Eukaryotic translation 38.9 1.5E+02 0.0052 25.2 9.3 68 276-347 43-111 (369)
134 1pby_B Quinohemoprotein amine 38.5 1.7E+02 0.006 24.4 9.9 95 237-346 220-315 (337)
135 2ynn_A Coatomer subunit beta'; 38.3 1.6E+02 0.0055 24.8 9.2 68 276-347 197-265 (304)
136 3no2_A Uncharacterized protein 38.2 1.8E+02 0.0061 24.4 11.5 141 188-347 57-201 (276)
137 2dk7_A Transcription elongatio 36.7 35 0.0012 22.7 3.3 21 324-344 22-42 (73)
138 2z3z_A Dipeptidyl aminopeptida 36.6 3E+02 0.01 26.5 19.0 188 123-344 236-438 (706)
139 1flg_A Protein (quinoprotein e 36.4 2.9E+02 0.0099 26.3 11.7 119 216-347 62-199 (582)
140 3mbr_X Glutamine cyclotransfer 36.0 1.9E+02 0.0066 24.2 16.7 140 186-350 42-189 (243)
141 3tc9_A Hypothetical hydrolase; 35.8 2.5E+02 0.0086 25.5 13.7 109 222-346 149-262 (430)
142 1ijq_A LDL receptor, low-densi 35.6 2.1E+02 0.0072 24.5 18.6 108 221-347 87-201 (316)
143 2bkl_A Prolyl endopeptidase; m 35.3 3.2E+02 0.011 26.5 20.2 144 186-348 251-404 (695)
144 3nok_A Glutaminyl cyclase; bet 35.3 2.1E+02 0.0072 24.4 13.8 109 220-349 62-173 (268)
145 2lyd_A Decapping protein 1; DC 34.2 48 0.0016 25.1 4.2 29 324-352 30-58 (134)
146 1got_B GT-beta; complex (GTP-b 34.2 2.2E+02 0.0076 24.3 20.1 95 236-344 164-260 (340)
147 1w6s_A Methanol dehydrogenase 34.2 3.2E+02 0.011 26.2 11.5 31 216-250 56-90 (599)
148 1yr2_A Prolyl oligopeptidase; 33.9 3.4E+02 0.012 26.5 12.8 112 222-347 327-447 (741)
149 2hz6_A Endoplasmic reticulum t 33.9 11 0.00037 34.0 0.7 30 217-250 4-35 (369)
150 2xzm_R RACK1; ribosome, transl 33.0 2.3E+02 0.0079 24.2 9.8 67 276-344 38-110 (343)
151 1got_B GT-beta; complex (GTP-b 32.8 2.3E+02 0.008 24.2 13.9 68 276-345 108-177 (340)
152 1yfq_A Cell cycle arrest prote 32.0 2.3E+02 0.0078 23.8 11.4 71 276-348 22-96 (342)
153 4a11_B DNA excision repair pro 32.0 2.5E+02 0.0085 24.2 19.3 56 287-344 312-368 (408)
154 3scy_A Hypothetical bacterial 31.8 2.5E+02 0.0084 24.1 14.0 73 275-348 220-300 (361)
155 3iz6_a 40S ribosomal protein R 31.1 2.7E+02 0.0091 24.3 16.1 207 109-347 74-286 (380)
156 2oiz_A Aromatic amine dehydrog 31.1 1.2E+02 0.0042 26.6 7.3 56 292-349 287-342 (361)
157 3gre_A Serine/threonine-protei 30.6 2.3E+02 0.008 25.0 9.4 67 276-346 181-250 (437)
158 3ow8_A WD repeat-containing pr 30.6 2.5E+02 0.0086 23.9 19.8 96 236-346 186-284 (321)
159 4a11_B DNA excision repair pro 30.5 2.6E+02 0.009 24.1 15.8 29 316-344 250-279 (408)
160 3bg1_A Protein SEC13 homolog; 30.1 2.3E+02 0.0077 24.0 8.8 69 275-345 23-94 (316)
161 2ghs_A AGR_C_1268P; regucalcin 29.8 2.6E+02 0.009 23.8 18.2 195 113-351 60-270 (326)
162 1ddw_A GLGF-domain protein hom 29.7 69 0.0024 23.7 4.4 37 126-173 14-51 (120)
163 1erj_A Transcriptional repress 28.8 2.8E+02 0.0095 24.4 9.4 66 276-345 134-200 (393)
164 4hw6_A Hypothetical protein, I 28.7 3.3E+02 0.011 24.7 12.9 113 216-344 141-262 (433)
165 2hes_X YDR267CP; beta-propelle 27.9 2.8E+02 0.0096 23.6 11.7 61 287-347 219-286 (330)
166 3dm0_A Maltose-binding peripla 27.4 3.4E+02 0.012 26.1 10.4 60 286-345 402-465 (694)
167 3odt_A Protein DOA1; ubiquitin 27.1 2.6E+02 0.0089 22.9 21.9 64 276-345 154-218 (313)
168 1e0n_A Hypothetical protein; Y 27.1 62 0.0021 16.8 2.7 19 327-345 5-23 (27)
169 1erj_A Transcriptional repress 26.9 3.2E+02 0.011 23.9 22.4 104 236-345 229-345 (393)
170 1gxr_A ESG1, transducin-like e 26.6 2.8E+02 0.0094 23.0 20.1 139 186-347 118-261 (337)
171 3vl1_A 26S proteasome regulato 26.5 3.2E+02 0.011 23.8 21.4 70 276-349 258-332 (420)
172 2jp2_A Spred-2, sprouty-relate 26.4 97 0.0033 23.1 4.7 38 126-173 23-65 (126)
173 3i2n_A WD repeat-containing pr 25.9 2.9E+02 0.01 23.2 16.0 199 109-343 26-245 (357)
174 3sov_A LRP-6, low-density lipo 25.8 3.2E+02 0.011 23.5 16.3 107 222-347 90-203 (318)
175 2xzh_A Clathrin heavy chain 1; 25.5 3.6E+02 0.012 24.1 16.5 32 314-345 260-294 (365)
176 1nir_A Nitrite reductase; hemo 25.4 4.2E+02 0.014 24.8 18.9 198 113-347 148-361 (543)
177 1jmx_B Amine dehydrogenase; ox 24.9 3.1E+02 0.01 23.0 13.3 145 186-346 20-180 (349)
178 1sq9_A Antiviral protein SKI8; 24.8 3.3E+02 0.011 23.4 12.8 112 222-347 197-328 (397)
179 2aq5_A Coronin-1A; WD40 repeat 24.8 3.5E+02 0.012 23.6 21.8 103 236-348 198-308 (402)
180 2xdw_A Prolyl endopeptidase; a 24.7 4.8E+02 0.016 25.2 14.9 112 223-347 298-422 (710)
181 3dr2_A Exported gluconolactona 24.5 3.1E+02 0.011 22.9 17.1 103 236-351 169-277 (305)
182 3hxj_A Pyrrolo-quinoline quino 24.4 3.1E+02 0.011 22.9 11.3 27 111-139 68-94 (330)
183 1pgu_A Actin interacting prote 24.3 4.3E+02 0.015 24.4 12.6 64 276-342 552-615 (615)
184 2ece_A 462AA long hypothetical 23.9 4.4E+02 0.015 24.4 10.2 99 235-340 227-351 (462)
185 3fm0_A Protein CIAO1; WDR39,SG 23.6 3.4E+02 0.012 23.1 19.0 62 276-339 161-223 (345)
186 3v64_C Agrin; beta propeller, 23.5 3.7E+02 0.013 23.4 19.2 192 110-347 81-282 (349)
187 1nr0_A Actin interacting prote 23.4 2.5E+02 0.0086 26.6 8.5 57 287-344 468-526 (611)
188 4a0p_A LRP6, LRP-6, low-densit 23.3 5.1E+02 0.017 24.9 19.0 183 116-345 9-201 (628)
189 2dg1_A DRP35, lactonase; beta 23.2 3.3E+02 0.011 22.8 9.0 69 275-347 54-127 (333)
190 3gre_A Serine/threonine-protei 23.1 3.9E+02 0.013 23.5 10.1 99 236-347 192-298 (437)
191 1npe_A Nidogen, entactin; glyc 23.1 3.1E+02 0.011 22.4 13.4 107 222-347 47-161 (267)
192 2pbi_B Guanine nucleotide-bind 23.0 3.6E+02 0.012 23.2 18.9 90 236-338 262-354 (354)
193 3mkq_A Coatomer beta'-subunit; 22.7 5.3E+02 0.018 25.0 18.2 66 276-344 152-220 (814)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 22.7 3.3E+02 0.011 22.5 18.9 193 121-349 45-265 (314)
195 3dm0_A Maltose-binding peripla 22.6 5.1E+02 0.018 24.8 11.6 95 236-345 541-636 (694)
196 4h5i_A Guanine nucleotide-exch 22.6 3.8E+02 0.013 23.2 14.4 72 275-346 229-305 (365)
197 2hqs_A Protein TOLB; TOLB, PAL 22.5 4.1E+02 0.014 23.6 16.9 185 123-347 160-350 (415)
198 2xyi_A Probable histone-bindin 22.5 4.1E+02 0.014 23.6 12.2 199 114-342 195-411 (430)
199 1i2h_A PSD-ZIP45(homer-1C/VESL 22.4 1.1E+02 0.0036 24.2 4.4 37 126-173 19-56 (168)
200 1pgu_A Actin interacting prote 22.3 4.6E+02 0.016 24.1 12.6 94 236-342 467-573 (615)
201 3f3f_A Nucleoporin SEH1; struc 22.0 3.4E+02 0.012 22.4 21.5 34 316-349 311-346 (351)
202 1q67_A Decapping protein invol 22.0 1E+02 0.0034 25.3 4.2 29 324-352 36-64 (231)
203 3p5b_L Low density lipoprotein 21.5 4.3E+02 0.015 23.5 17.4 193 113-347 83-283 (400)
204 3nol_A Glutamine cyclotransfer 21.2 3.8E+02 0.013 22.7 16.1 139 186-349 64-210 (262)
205 4h5i_A Guanine nucleotide-exch 21.1 3.7E+02 0.013 23.3 8.6 67 275-344 143-209 (365)
206 3vu4_A KMHSV2; beta-propeller 21.0 3.5E+02 0.012 23.3 8.4 65 275-343 205-273 (355)
207 2hqs_A Protein TOLB; TOLB, PAL 21.0 4.4E+02 0.015 23.4 19.0 184 123-348 204-394 (415)
208 2pm7_B Protein transport prote 20.8 3.6E+02 0.012 22.3 19.5 56 287-342 178-239 (297)
209 3k26_A Polycomb protein EED; W 20.6 3.8E+02 0.013 22.5 13.8 67 277-347 85-153 (366)
210 3s3x_D Psalmotoxin-1; acid-sen 20.3 67 0.0023 17.2 1.9 22 110-132 15-36 (37)
211 4aow_A Guanine nucleotide-bind 20.3 3.7E+02 0.013 22.3 13.3 95 236-345 195-290 (340)
212 2ovr_B FBW7, F-BOX/WD repeat p 20.1 4.5E+02 0.016 23.2 23.2 110 219-342 325-443 (445)
213 2qkl_A DCP1 protein, SPBC3B9.2 20.1 33 0.0011 25.7 1.0 28 325-352 26-53 (127)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.12 E-value=5.9e-08 Score=87.67 Aligned_cols=193 Identities=9% Similarity=0.011 Sum_probs=121.5
Q ss_pred CceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeec
Q 036281 123 TLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDL 202 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~ 202 (371)
.+ +++||.|++|..+|+.+..+ . ....+ .++ -+++.+...... .....+++|+..+++|+.+
T Consensus 91 ~~-~~~d~~~~~W~~~~~~p~~r--~---~~~~~--~~~-----~~iyv~GG~~~~-----~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 91 AL-DCYNPMTNQWSPCAPMSVPR--N---RIGVG--VID-----GHIYAVGGSHGC-----IHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CE-EEEETTTTEEEECCCCSSCC--B---TCEEE--EET-----TEEEEECCEETT-----EECCCEEEEETTTTEEEEC
T ss_pred eE-EEECCCCCeEeECCCCCcCc--c---ccEEE--EEC-----CEEEEEcCCCCC-----cccccEEEECCCCCeEeEC
Confidence 46 99999999999998766431 1 11111 111 245555432221 1245799999999999999
Q ss_pred CccccccceeccccceEEECceEEEEEecCC--CCcEEEEEECCCceEEEeCC-CCCCCCCcccccCCCcceEEEeCCeE
Q 036281 203 KGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--YSKAILAFSMSNEVFQEIKG-PSVPQTTTYYQSVKTPWMLGTYDDCL 279 (371)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~Il~fD~~~e~~~~i~~-P~~~~~~~~~~~~~~~~~L~~~~g~L 279 (371)
+.. |........+.++|.+|-+..... ....+..||+.+++|+.+.. |... .....+..+|+|
T Consensus 153 ~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i 218 (308)
T 1zgk_A 153 APM----LTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR----------SGAGVCVLHNCI 218 (308)
T ss_dssp CCC----SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTEE
T ss_pred CCC----CccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc----------ccceEEEECCEE
Confidence 743 322223466788999999875432 13569999999999998852 3322 234566779999
Q ss_pred EEEec-CCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEEEE
Q 036281 280 SLLYS-DKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDLGI 349 (371)
Q Consensus 280 ~l~~~-~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~~ 349 (371)
.++.- ......-++|+++- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++|+++.-
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVETETWTFVAPM-KHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTR 295 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE
T ss_pred EEEeCCCCCCccceEEEEeCCCCcEEECCCC-CCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCC
Confidence 99762 11222345566654 889876533 22212222222 3678877632 3569999999999999843
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.09 E-value=3.2e-08 Score=89.24 Aligned_cols=210 Identities=10% Similarity=-0.014 Sum_probs=130.2
Q ss_pred EEEeeecceEEEeec------CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCC
Q 036281 107 IHIGPYDGIFCLLKS------HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQR 180 (371)
Q Consensus 107 ~~~~s~~GLl~~~~~------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 180 (371)
...+..+|.|.+.-+ ..+ .++||.|++|..+|+.+..+ . ....+ .++ -+++.+.....
T Consensus 49 ~~~~~~~~~lyv~GG~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r--~---~~~~~--~~~-----~~iyv~GG~~~--- 112 (306)
T 3ii7_A 49 AACVFWDNVVYILGGSQLFPIKRM-DCYNVVKDSWYSKLGPPTPR--D---SLAAC--AAE-----GKIYTSGGSEV--- 112 (306)
T ss_dssp CEEEEETTEEEEECCBSSSBCCEE-EEEETTTTEEEEEECCSSCC--B---SCEEE--EET-----TEEEEECCBBT---
T ss_pred eEEEEECCEEEEEeCCCCCCcceE-EEEeCCCCeEEECCCCCccc--c---ceeEE--EEC-----CEEEEECCCCC---
Confidence 444456776655432 345 89999999999998766421 1 11111 111 24555543221
Q ss_pred CCCCCcceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCC--C----CcEEEEEECCCceEEEeC-C
Q 036281 181 DSFHDFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--Y----SKAILAFSMSNEVFQEIK-G 253 (371)
Q Consensus 181 ~~~~~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~----~~~Il~fD~~~e~~~~i~-~ 253 (371)
+......+++|+..+++|+.++.. |........+.++|.+|.+..... . ...+..||+.+++|+.+. +
T Consensus 113 -~~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 187 (306)
T 3ii7_A 113 -GNSALYLFECYDTRTESWHTKPSM----LTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM 187 (306)
T ss_dssp -TBSCCCCEEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC
T ss_pred -CCcEeeeEEEEeCCCCceEeCCCC----cCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc
Confidence 122356899999999999999643 322224466888999999875321 1 456999999999999985 3
Q ss_pred CCCCCCCcccccCCCcceEEEeCCeEEEEecC-CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc
Q 036281 254 PSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSD-KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS 330 (371)
Q Consensus 254 P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~-~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 330 (371)
|... ....++..+|+|.++.-. .....-++|+++- ..|+..-.+ |.+.......+. +++|++...
T Consensus 188 p~~r----------~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~i~v~GG 255 (306)
T 3ii7_A 188 IEAR----------KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTVKCAAV-GSIVYVLAG 255 (306)
T ss_dssp SSCC----------BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCCEEEEE-TTEEEEEEC
T ss_pred cchh----------hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccceeEEEE-CCEEEEEeC
Confidence 3322 234567789999997521 1111234666664 789876433 222222223333 678877743
Q ss_pred ------CCeEEEEeCCCCeEEEEEE
Q 036281 331 ------DKRVILYDSRYHEMRDLGI 349 (371)
Q Consensus 331 ------~~~l~~yd~~~~~~~~v~~ 349 (371)
...+..||+++++|+.+.-
T Consensus 256 ~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 256 FQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp BCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred cCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 2579999999999999843
No 3
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.07 E-value=3e-11 Score=107.08 Aligned_cols=51 Identities=22% Similarity=0.567 Sum_probs=47.4
Q ss_pred ccCCCCCHHHHHHHHhcCCccccc-eeeecccchhhhcCChHHHHHHhccCC
Q 036281 8 KTLGDLSDDMMIETLSRLPVKSLM-RFKCVCISWCDLVKDPNFIYKHLKRDD 58 (371)
Q Consensus 8 ~~~~~LP~dll~~IL~rLP~ksl~-r~r~VcK~W~~li~~p~F~~~~~~~~~ 58 (371)
..+..||+||+.+||+|||+++|+ ||++|||+|+++|++|.|.+.++.+..
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~g 100 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQEG 100 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHTT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhccC
Confidence 456899999999999999999999 999999999999999999999987763
No 4
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.05 E-value=3.5e-11 Score=78.64 Aligned_cols=46 Identities=22% Similarity=0.437 Sum_probs=39.4
Q ss_pred hcccCCCCCHHHHHHHHhcCCccccceeeecccchhhhcCChHHHH
Q 036281 6 RVKTLGDLSDDMMIETLSRLPVKSLMRFKCVCISWCDLVKDPNFIY 51 (371)
Q Consensus 6 ~~~~~~~LP~dll~~IL~rLP~ksl~r~r~VcK~W~~li~~p~F~~ 51 (371)
....+..||+|++.+||.+||++++.++++|||+|+.++.++.|.+
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3456789999999999999999999999999999999999998754
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.04 E-value=9.2e-08 Score=85.94 Aligned_cols=208 Identities=8% Similarity=0.035 Sum_probs=128.5
Q ss_pred EEEeeecceEEEeec-------CCceEEEeccccc---cccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEe
Q 036281 107 IHIGPYDGIFCLLKS-------HTLINLWNVSLNE---YRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLW 176 (371)
Q Consensus 107 ~~~~s~~GLl~~~~~-------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~ 176 (371)
...+..+|.|.+.-+ +.+ +++||.|++ |..+++.+..+ . . .+.... + -+++.+....
T Consensus 56 ~~~~~~~~~l~v~GG~~~~~~~~~~-~~~d~~~~~~~~W~~~~~~p~~r--~---~---~~~~~~---~-~~lyv~GG~~ 122 (301)
T 2vpj_A 56 VASVSLHDRIYVIGGYDGRSRLSSV-ECLDYTADEDGVWYSVAPMNVRR--G---L---AGATTL---G-DMIYVSGGFD 122 (301)
T ss_dssp CEEEEETTEEEEECCBCSSCBCCCE-EEEETTCCTTCCCEEECCCSSCC--B---S---CEEEEE---T-TEEEEECCBC
T ss_pred ccEEEECCEEEEEcCCCCCccCceE-EEEECCCCCCCeeEECCCCCCCc--c---c---eeEEEE---C-CEEEEEcccC
Confidence 444555666655431 346 999999999 99998766431 1 1 111111 1 2455554322
Q ss_pred cCCCCCCCCcceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCC--CCcEEEEEECCCceEEEeC-C
Q 036281 177 NDQRDSFHDFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--YSKAILAFSMSNEVFQEIK-G 253 (371)
Q Consensus 177 ~~~~~~~~~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~Il~fD~~~e~~~~i~-~ 253 (371)
. ......+++|+..+++|+.++.. |........+.++|.+|.+..... ....+..||+.+.+|+.+. +
T Consensus 123 ~-----~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 193 (301)
T 2vpj_A 123 G-----SRRHTSMERYDPNIDQWSMLGDM----QTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM 193 (301)
T ss_dssp S-----SCBCCEEEEEETTTTEEEEEEEC----SSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC
T ss_pred C-----CcccceEEEEcCCCCeEEECCCC----CCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC
Confidence 1 12246799999999999998633 322224466788999999875432 2356999999999999984 3
Q ss_pred CCCCCCCcccccCCCcceEEEeCCeEEEEecCC-CCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc
Q 036281 254 PSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDK-FAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS 330 (371)
Q Consensus 254 P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~-~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 330 (371)
|... ....++..+|+|.++.-.. ....-++|.++- ..|++.-.+ |.+.......+ -+++|++...
T Consensus 194 p~~r----------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG 261 (301)
T 2vpj_A 194 ATKR----------SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYVGATV-LRGRLYAIAG 261 (301)
T ss_dssp SSCC----------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEECC
T ss_pred Cccc----------ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccceeEEE-ECCEEEEEcC
Confidence 3322 2345677899999976311 111234555554 789887543 22222222333 3678877642
Q ss_pred C------CeEEEEeCCCCeEEEEE
Q 036281 331 D------KRVILYDSRYHEMRDLG 348 (371)
Q Consensus 331 ~------~~l~~yd~~~~~~~~v~ 348 (371)
. ..+..||+++++|+.+.
T Consensus 262 ~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 262 YDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp BCSSSBEEEEEEEETTTTEEEEEE
T ss_pred cCCCcccccEEEEcCCCCeEEEcC
Confidence 1 46899999999999884
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.03 E-value=1.2e-07 Score=85.96 Aligned_cols=191 Identities=12% Similarity=0.106 Sum_probs=120.7
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeecCcc
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDLKGF 205 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~~~~ 205 (371)
+++||.|++|..+|+.+..+. . .+.... + -+++.+...... +......+++|+..+++|+.++..
T Consensus 81 ~~~d~~~~~W~~~~~~p~~r~-----~---~~~~~~---~-~~iyv~GG~~~~---~~~~~~~~~~yd~~~~~W~~~~~~ 145 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPSARC-----L---FGLGEV---D-DKIYVVAGKDLQ---TEASLDSVLCYDPVAAKWSEVKNL 145 (318)
T ss_dssp EEEETTTTEEEECSCBSSCBC-----S---CEEEEE---T-TEEEEEEEEBTT---TCCEEEEEEEEETTTTEEEEECCC
T ss_pred EEEeCCCCcEEECCCCCcccc-----c---cceEEE---C-CEEEEEcCccCC---CCcccceEEEEeCCCCCEeECCCC
Confidence 899999999999987664311 1 111111 1 245555443211 112356799999999999998743
Q ss_pred ccccceeccccceEEECceEEEEEecCC---CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEeCCeEEE
Q 036281 206 EMRFDYMVDRIYNVYLNGYCYWVVCRPD---YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTYDDCLSL 281 (371)
Q Consensus 206 ~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~~g~L~l 281 (371)
|........+.++|.+|.+..... ....+..||+.+.+|+.+. +|... .....+..+|+|.+
T Consensus 146 ----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv 211 (318)
T 2woz_A 146 ----PIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR----------SMFGVAIHKGKIVI 211 (318)
T ss_dssp ----SSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEEEE
T ss_pred ----CCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc----------ccceEEEECCEEEE
Confidence 222223466789999999875321 2346999999999999985 33322 23456778999999
Q ss_pred EecC-CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc---------------CCeEEEEeCCCCe
Q 036281 282 LYSD-KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS---------------DKRVILYDSRYHE 343 (371)
Q Consensus 282 ~~~~-~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~---------------~~~l~~yd~~~~~ 343 (371)
+.-. .....-++|+++- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++
T Consensus 212 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 212 AGGVTEDGLSASVEAFDLKTNKWEVMTEF-PQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEEEETTEEEEEEEEEETTTCCEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EcCcCCCCccceEEEEECCCCeEEECCCC-CCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 7621 1222346677665 789886543 22222222333 3677777631 2468999999999
Q ss_pred EEEE
Q 036281 344 MRDL 347 (371)
Q Consensus 344 ~~~v 347 (371)
|+++
T Consensus 290 W~~~ 293 (318)
T 2woz_A 290 WAGM 293 (318)
T ss_dssp EEEE
T ss_pred ehhh
Confidence 9998
No 7
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.02 E-value=1.1e-07 Score=85.50 Aligned_cols=207 Identities=11% Similarity=0.110 Sum_probs=128.1
Q ss_pred EEeeecceEEEeec-------CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCC
Q 036281 108 HIGPYDGIFCLLKS-------HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQR 180 (371)
Q Consensus 108 ~~~s~~GLl~~~~~-------~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~ 180 (371)
..+..+|.|.+.-+ +.+ .++||.|++|..+|+.+..+. ....+. ++ + +++.+.....
T Consensus 56 ~~~~~~~~lyv~GG~~~~~~~~~~-~~~d~~~~~W~~~~~~p~~r~-----~~~~~~--~~---~--~iyv~GG~~~--- 119 (302)
T 2xn4_A 56 GMVYMAGLVFAVGGFNGSLRVRTV-DSYDPVKDQWTSVANMRDRRS-----TLGAAV--LN---G--LLYAVGGFDG--- 119 (302)
T ss_dssp EEEEETTEEEEESCBCSSSBCCCE-EEEETTTTEEEEECCCSSCCB-----SCEEEE--ET---T--EEEEEEEECS---
T ss_pred eEEEECCEEEEEeCcCCCccccce-EEECCCCCceeeCCCCCcccc-----ceEEEE--EC---C--EEEEEcCCCC---
Confidence 34455676655431 346 999999999999987664311 111111 11 1 4555543221
Q ss_pred CCCCCcceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCC----CCcEEEEEECCCceEEEeC-CCC
Q 036281 181 DSFHDFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD----YSKAILAFSMSNEVFQEIK-GPS 255 (371)
Q Consensus 181 ~~~~~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~----~~~~Il~fD~~~e~~~~i~-~P~ 255 (371)
......+++|+..+++|+.++.. |........+.++|.+|-+..... ....+..||+.+++|+.+. +|.
T Consensus 120 --~~~~~~~~~~d~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 193 (302)
T 2xn4_A 120 --STGLSSVEAYNIKSNEWFHVAPM----NTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMST 193 (302)
T ss_dssp --SCEEEEEEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSS
T ss_pred --CccCceEEEEeCCCCeEeecCCC----CCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcc
Confidence 12246799999999999999743 222223456788999999864321 1346899999999999984 333
Q ss_pred CCCCCcccccCCCcceEEEeCCeEEEEecCC-CCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc--
Q 036281 256 VPQTTTYYQSVKTPWMLGTYDDCLSLLYSDK-FAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS-- 330 (371)
Q Consensus 256 ~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~-~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-- 330 (371)
.. ....++..+|+|.++.-.. ....-++|+++- ..|+..-.+ |.+.......+ -+++|++...
T Consensus 194 ~r----------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~-~~~~i~v~GG~~ 261 (302)
T 2xn4_A 194 RR----------SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNAGVCA-VNGLLYVVGGDD 261 (302)
T ss_dssp CC----------BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEECCBC
T ss_pred cc----------ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccCeEEE-ECCEEEEECCcC
Confidence 22 2345677899999976211 111235666664 789986543 22212222232 3778877742
Q ss_pred ----CCeEEEEeCCCCeEEEEE
Q 036281 331 ----DKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 331 ----~~~l~~yd~~~~~~~~v~ 348 (371)
...+..||+++++|+.+.
T Consensus 262 ~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEECS
T ss_pred CCcccccEEEEcCCCCeEEECC
Confidence 245999999999999874
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.00 E-value=9.8e-08 Score=86.48 Aligned_cols=192 Identities=10% Similarity=0.052 Sum_probs=122.3
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeecCcc
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDLKGF 205 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~~~~ 205 (371)
+++||.|++|..+|+.+..+ . ..+.... + -+++.+...... .+......+++|+..+++|+.++..
T Consensus 70 ~~~d~~~~~W~~~~~~p~~r--~------~~~~~~~---~-~~lyv~GG~~~~--~~~~~~~~~~~~d~~~~~W~~~~~~ 135 (315)
T 4asc_A 70 LQFDHLDSEWLGMPPLPSPR--C------LFGLGEA---L-NSIYVVGGREIK--DGERCLDSVMCYDRLSFKWGESDPL 135 (315)
T ss_dssp EEEETTTTEEEECCCBSSCE--E------SCEEEEE---T-TEEEEECCEESS--TTCCBCCCEEEEETTTTEEEECCCC
T ss_pred EEecCCCCeEEECCCCCcch--h------ceeEEEE---C-CEEEEEeCCcCC--CCCcccceEEEECCCCCcEeECCCC
Confidence 89999999999998776421 1 1111111 1 255555543210 1123356899999999999999743
Q ss_pred ccccceeccccceEEECceEEEEEecCC---CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEeCCeEEE
Q 036281 206 EMRFDYMVDRIYNVYLNGYCYWVVCRPD---YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTYDDCLSL 281 (371)
Q Consensus 206 ~~~~~~~~~~~~~v~~~G~lywl~~~~~---~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~~g~L~l 281 (371)
|........+.++|.+|.+..... ....+..||+.+.+|+.+. +|... .....+..+|+|.+
T Consensus 136 ----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~iyv 201 (315)
T 4asc_A 136 ----PYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR----------SLFGATVHDGRIIV 201 (315)
T ss_dssp ----SSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTEEEE
T ss_pred ----CCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch----------hceEEEEECCEEEE
Confidence 322224466889999999886521 2356999999999999885 34322 23456778999999
Q ss_pred EecC-CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEcC---------------CeEEEEeCCCCe
Q 036281 282 LYSD-KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESSD---------------KRVILYDSRYHE 343 (371)
Q Consensus 282 ~~~~-~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~---------------~~l~~yd~~~~~ 343 (371)
+.-. .....-++|+++- ..|+..-.+ |.+.......+ -+++|++.... ..+..||+++++
T Consensus 202 ~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 202 AAGVTDTGLTSSAEVYSITDNKWAPFEAF-PQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEECSSSEEEEEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EeccCCCCccceEEEEECCCCeEEECCCC-CCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 7631 2223346777765 789987543 22222222333 36677776321 348899999999
Q ss_pred EEEE
Q 036281 344 MRDL 347 (371)
Q Consensus 344 ~~~v 347 (371)
|+.+
T Consensus 280 W~~~ 283 (315)
T 4asc_A 280 WEGV 283 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 9998
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.87 E-value=1.9e-07 Score=86.11 Aligned_cols=217 Identities=12% Similarity=0.058 Sum_probs=124.6
Q ss_pred EEeeecceEEEee---cCCceEEEeccc--cccccCCCCC-CCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCC
Q 036281 108 HIGPYDGIFCLLK---SHTLINLWNVSL--NEYRGLPECR-PRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRD 181 (371)
Q Consensus 108 ~~~s~~GLl~~~~---~~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~ 181 (371)
..+..+|.|.+.- ...+ +++||.+ ++|..+|+.+ ..+ . ....+ .++ + +|+.+.........
T Consensus 14 ~~~~~~~~iyv~GG~~~~~~-~~~d~~~~~~~W~~~~~~p~~~R--~---~~~~~--~~~---~--~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 14 TGAIDNDTVYIGLGSAGTAW-YKLDTQAKDKKWTALAAFPGGPR--D---QATSA--FID---G--NLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEEETTEEEEECGGGTTCE-EEEETTSSSCCEEECCCCTTCCC--B---SCEEE--EET---T--EEEEECCEEECTTS
T ss_pred EEEEECCEEEEEeCcCCCeE-EEEccccCCCCeeECCCCCCCcC--c---cceEE--EEC---C--EEEEEcCCCCCCCc
Confidence 3344466665543 3456 9999984 8999998766 321 1 11111 111 1 45555433110000
Q ss_pred CCCCcceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCC----------------------------
Q 036281 182 SFHDFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD---------------------------- 233 (371)
Q Consensus 182 ~~~~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~---------------------------- 233 (371)
.......+++|+..+++|+.++... |........+.++|.+|.+.....
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~---p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHA---PMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYF 157 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCC---SSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cceeeccEEEEeCCCCcEEECCCCC---CcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhc
Confidence 0122467999999999999997542 122223355779999999886431
Q ss_pred --------CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEeCCeEEEEecC--CCCCEEEEEEee---C-
Q 036281 234 --------YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSD--KFAHSFELWIMK---G- 298 (371)
Q Consensus 234 --------~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~--~~~~~~~iW~L~---~- 298 (371)
....+..||+.+.+|+.+. +|.... ....++..+|+|.++.-. .....-++|.++ +
T Consensus 158 ~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~---------~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~ 228 (357)
T 2uvk_A 158 DKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT---------AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNN 228 (357)
T ss_dssp SSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC---------BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---
T ss_pred cccccccCCcccEEEEeCCCCcEEECCCCCCCCc---------ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCC
Confidence 0247999999999999884 343211 125677789999997521 111234566664 2
Q ss_pred CceeEEEEecCCCcceeeeEEeeCCEEEEEEcC-----------------------CeEEEEeCCCCeEEEEEE
Q 036281 299 GFWIKHLTFGPFIETYQPLGFWRKDEFLLESSD-----------------------KRVILYDSRYHEMRDLGI 349 (371)
Q Consensus 299 ~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~-----------------------~~l~~yd~~~~~~~~v~~ 349 (371)
..|+++-.+..........++..+++|++.... ..+..||+++++|+.+.-
T Consensus 229 ~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 229 LKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred CcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 789886544211111222233346788776421 257899999999999854
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.83 E-value=6.9e-07 Score=80.14 Aligned_cols=193 Identities=10% Similarity=0.065 Sum_probs=120.9
Q ss_pred CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCc---
Q 036281 122 HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNS--- 198 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~--- 198 (371)
..+ +++||.|++|..+|..+..+ . ....+ ..+ -+++.+..... ......+++|+..++.
T Consensus 31 ~~~-~~~d~~~~~W~~~~~~p~~r--~---~~~~~--~~~-----~~l~v~GG~~~-----~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 31 DVV-EKYDPKTQEWSFLPSITRKR--R---YVASV--SLH-----DRIYVIGGYDG-----RSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCE-EEEETTTTEEEECCCCSSCC--B---SCEEE--EET-----TEEEEECCBCS-----SCBCCCEEEEETTCCTTCC
T ss_pred eEE-EEEcCCCCeEEeCCCCChhh--c---cccEE--EEC-----CEEEEEcCCCC-----CccCceEEEEECCCCCCCe
Confidence 345 99999999999998765421 1 11111 111 14555543211 1235679999999999
Q ss_pred eeecCccccccceeccccceEEECceEEEEEecCC--CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEe
Q 036281 199 WRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTY 275 (371)
Q Consensus 199 Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~ 275 (371)
|+.++.. |........+.++|.+|.+..... ....+..||+.+.+|+.+. +|... .....+..
T Consensus 93 W~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~ 158 (301)
T 2vpj_A 93 WYSVAPM----NVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR----------EGAGLVVA 158 (301)
T ss_dssp CEEECCC----SSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC----------BSCEEEEE
T ss_pred eEECCCC----CCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc----------ccceEEEE
Confidence 9999643 322224466788999999875432 1347999999999999884 34322 23456667
Q ss_pred CCeEEEEecC-CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEE
Q 036281 276 DDCLSLLYSD-KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRD 346 (371)
Q Consensus 276 ~g~L~l~~~~-~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~ 346 (371)
+|+|.++.-. .....-++|+++- ..|++.-.+ |.+....... .-+++|++... ...+..||+++++|+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGAGVA-LLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-CcccccceEE-EECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 9999997521 1112334566664 889887433 2222222222 23678877742 3469999999999998
Q ss_pred EE
Q 036281 347 LG 348 (371)
Q Consensus 347 v~ 348 (371)
+.
T Consensus 237 ~~ 238 (301)
T 2vpj_A 237 VT 238 (301)
T ss_dssp EC
T ss_pred CC
Confidence 84
No 11
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.80 E-value=4.6e-07 Score=81.56 Aligned_cols=192 Identities=11% Similarity=0.040 Sum_probs=120.3
Q ss_pred CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceee
Q 036281 122 HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRD 201 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~ 201 (371)
..+ .++||.+++|..+++.+..+. ....+ .++ + +++.+.... ......+++|+..+++|+.
T Consensus 24 ~~~-~~~d~~~~~W~~~~~~p~~r~-----~~~~~--~~~----~-~lyv~GG~~------~~~~~~~~~~d~~~~~W~~ 84 (306)
T 3ii7_A 24 QSC-RYFNPKDYSWTDIRCPFEKRR-----DAACV--FWD----N-VVYILGGSQ------LFPIKRMDCYNVVKDSWYS 84 (306)
T ss_dssp TSE-EEEETTTTEEEECCCCSCCCB-----SCEEE--EET----T-EEEEECCBS------SSBCCEEEEEETTTTEEEE
T ss_pred ceE-EEecCCCCCEecCCCCCcccc-----eeEEE--EEC----C-EEEEEeCCC------CCCcceEEEEeCCCCeEEE
Confidence 455 999999999999987764211 11111 111 1 355554321 1225689999999999999
Q ss_pred cCccccccceeccccceEEECceEEEEEecC-C--CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEeCC
Q 036281 202 LKGFEMRFDYMVDRIYNVYLNGYCYWVVCRP-D--YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTYDD 277 (371)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-~--~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~~g 277 (371)
++.. |........+.++|.+|.+.... . ....+..||+.+.+|+.+. +|... .....+..+|
T Consensus 85 ~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~ 150 (306)
T 3ii7_A 85 KLGP----PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR----------CSHGMVEANG 150 (306)
T ss_dssp EECC----SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC----------BSCEEEEETT
T ss_pred CCCC----CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc----------ceeEEEEECC
Confidence 8643 32222346678899999987543 1 2456999999999999884 34332 2345667899
Q ss_pred eEEEEec-CCCCC----EEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeE
Q 036281 278 CLSLLYS-DKFAH----SFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHEM 344 (371)
Q Consensus 278 ~L~l~~~-~~~~~----~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~ 344 (371)
+|.++.- ..... .-++|.++- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++|
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 228 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM-IEARKNHGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEW 228 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEE
T ss_pred EEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc-cchhhcceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcE
Confidence 9999652 11111 334555554 889887533 22212222222 3677777632 24699999999999
Q ss_pred EEEE
Q 036281 345 RDLG 348 (371)
Q Consensus 345 ~~v~ 348 (371)
+.+.
T Consensus 229 ~~~~ 232 (306)
T 3ii7_A 229 KMVS 232 (306)
T ss_dssp EECC
T ss_pred EECC
Confidence 9884
No 12
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.76 E-value=8.6e-07 Score=79.61 Aligned_cols=192 Identities=10% Similarity=0.088 Sum_probs=119.5
Q ss_pred CceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeec
Q 036281 123 TLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDL 202 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~ 202 (371)
.+ .++||.+++|..++..+..+ . . .+.... +-+++.+..... ......+++|+..+++|+.+
T Consensus 31 ~~-~~~d~~~~~W~~~~~~p~~r--~---~---~~~~~~----~~~lyv~GG~~~-----~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 31 SV-ECYDFKEERWHQVAELPSRR--C---R---AGMVYM----AGLVFAVGGFNG-----SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CE-EEEETTTTEEEEECCCSSCC--B---S---CEEEEE----TTEEEEESCBCS-----SSBCCCEEEEETTTTEEEEE
T ss_pred cE-EEEcCcCCcEeEcccCCccc--c---c---ceEEEE----CCEEEEEeCcCC-----CccccceEEECCCCCceeeC
Confidence 45 89999999999998665421 1 1 111111 124555543211 12245789999999999999
Q ss_pred CccccccceeccccceEEECceEEEEEecCC--CCcEEEEEECCCceEEEeCC-CCCCCCCcccccCCCcceEEEeCCeE
Q 036281 203 KGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--YSKAILAFSMSNEVFQEIKG-PSVPQTTTYYQSVKTPWMLGTYDDCL 279 (371)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~Il~fD~~~e~~~~i~~-P~~~~~~~~~~~~~~~~~L~~~~g~L 279 (371)
+.. |........+.++|.+|-+..... ....+-.||+.+.+|+.+.. |... .....+..+|+|
T Consensus 93 ~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i 158 (302)
T 2xn4_A 93 ANM----RDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR----------SSVGVGVVGGLL 158 (302)
T ss_dssp CCC----SSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC----------BSCEEEEETTEE
T ss_pred CCC----CccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc----------cCceEEEECCEE
Confidence 743 222223466788999999876432 12468899999999999843 3322 234566789999
Q ss_pred EEEecC-CCC--CEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEEE
Q 036281 280 SLLYSD-KFA--HSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 280 ~l~~~~-~~~--~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 348 (371)
.++.-. ... ..-++|..+- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++|+.+.
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCcEEECCCC-ccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 997521 111 1224555554 789987443 22222222233 3678877742 246999999999999885
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.76 E-value=2.5e-06 Score=77.13 Aligned_cols=200 Identities=8% Similarity=0.022 Sum_probs=118.5
Q ss_pred cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecC-CCCCCCCcceEEEEEcCCCce
Q 036281 121 SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWND-QRDSFHDFSHVAVYNFSTNSW 199 (371)
Q Consensus 121 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~-~~~~~~~~~~~~vy~~~~~~W 199 (371)
+..+ .++||.|++|.. ++.+...++ . ..+... ..+ +++.+...... ..........+++|+..+++|
T Consensus 12 G~~~-~~yd~~~~~W~~-~~~~~p~~r----~--~~~~~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 12 EEGA-VAYDPAANECYC-ASLSSQVPK----N--HVSLVT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp TTEE-EEEETTTTEEEE-EECCCCSCS----S--EEEEEC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred CCce-EEECCCCCeEec-CCCCCCCCc----c--ceEEEE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 3556 999999999976 332221111 1 122221 122 34444332111 111111234589999999999
Q ss_pred eecCccccccceeccccceEEECceEEEEEecC-----CCCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEE
Q 036281 200 RDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRP-----DYSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLG 273 (371)
Q Consensus 200 r~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~-----~~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~ 273 (371)
+.++.. |........+.++|.+|.+.... .....+..||+.+.+|+.+. +|... .....+
T Consensus 80 ~~~~~~----p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----------~~~~~~ 145 (315)
T 4asc_A 80 LGMPPL----PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----------YGHTVL 145 (315)
T ss_dssp EECCCB----SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----------BSCEEE
T ss_pred EECCCC----CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----------cceeEE
Confidence 998743 32222346688899999987631 12356899999999999874 34332 234566
Q ss_pred EeCCeEEEEecC--CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCe
Q 036281 274 TYDDCLSLLYSD--KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHE 343 (371)
Q Consensus 274 ~~~g~L~l~~~~--~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~ 343 (371)
..+|+|.++.-. .....-++|.++- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++
T Consensus 146 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred EECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 789999997631 2222335666665 789886543 22222222233 3678777642 1369999999999
Q ss_pred EEEEE
Q 036281 344 MRDLG 348 (371)
Q Consensus 344 ~~~v~ 348 (371)
|+.+.
T Consensus 224 W~~~~ 228 (315)
T 4asc_A 224 WAPFE 228 (315)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 99884
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.72 E-value=6.7e-07 Score=80.69 Aligned_cols=197 Identities=14% Similarity=0.025 Sum_probs=119.2
Q ss_pred CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceee
Q 036281 122 HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRD 201 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~ 201 (371)
+.+ .++||.|++|..++..+..+. . .+.... + -+++.+....... .+......+++|+..+++|+.
T Consensus 39 ~~~-~~~d~~~~~W~~~~~~p~~r~-----~---~~~~~~---~-~~lyv~GG~~~~~-~~~~~~~~~~~~d~~~~~W~~ 104 (308)
T 1zgk_A 39 SYL-EAYNPSNGTWLRLADLQVPRS-----G---LAGCVV---G-GLLYAVGGRNNSP-DGNTDSSALDCYNPMTNQWSP 104 (308)
T ss_dssp CCE-EEEETTTTEEEECCCCSSCCB-----S---CEEEEE---T-TEEEEECCEEEET-TEEEECCCEEEEETTTTEEEE
T ss_pred ceE-EEEcCCCCeEeECCCCCcccc-----c---ceEEEE---C-CEEEEECCCcCCC-CCCeecceEEEECCCCCeEeE
Confidence 345 999999999999987664211 1 111111 1 2444443321000 001124578999999999999
Q ss_pred cCccccccceeccccceEEECceEEEEEecCC--CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEEeCCe
Q 036281 202 LKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD--YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGTYDDC 278 (371)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~~~g~ 278 (371)
++.. |........+.++|.+|.+..... ....+..||+.+.+|+.+. +|... .....+..+|+
T Consensus 105 ~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~ 170 (308)
T 1zgk_A 105 CAPM----SVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRR----------IGVGVAVLNRL 170 (308)
T ss_dssp CCCC----SSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCC----------BSCEEEEETTE
T ss_pred CCCC----CcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccc----------cceEEEEECCE
Confidence 9743 222223466788999999864321 1246899999999999884 34332 23456667999
Q ss_pred EEEEecC-CCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEEE
Q 036281 279 LSLLYSD-KFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 279 L~l~~~~-~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v~ 348 (371)
|.++.-. .....-++|.++- ..|++.-.+ |.+.......+ -+++|++... ...+..||+++++|+.+.
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYPERNEWRMITAM-NTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC-CCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 9997621 1111234555554 889876433 22222222233 3678877642 256999999999999884
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.67 E-value=2e-06 Score=86.63 Aligned_cols=200 Identities=13% Similarity=0.130 Sum_probs=119.4
Q ss_pred CceEEEeccccccccCC-CCC---CCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCc
Q 036281 123 TLINLWNVSLNEYRGLP-ECR---PRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNS 198 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP-~~~---~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~ 198 (371)
.+ +++||.|++|..++ +.+ ...++. ....+.+.. +-+++.++..... ......+++|+..+++
T Consensus 413 ~v-~~yd~~~~~W~~~~~~~p~~~~p~~R~---~hs~~~~~~-----~~~lyv~GG~~~~----~~~~~dv~~yd~~t~~ 479 (695)
T 2zwa_A 413 EI-LQLSIHYDKIDMKNIEVSSSEVPVARM---CHTFTTISR-----NNQLLLIGGRKAP----HQGLSDNWIFDMKTRE 479 (695)
T ss_dssp CE-EEEEECSSCEEEEECCCCCSCCCCCCB---SCEEEEETT-----TTEEEEECCBSST----TCBCCCCEEEETTTTE
T ss_pred cE-EEEECCCCeEEEeccCCCCCCCCcccc---ceEEEEEcc-----CCEEEEEcCCCCC----CCccccEEEEeCCCCc
Confidence 46 99999999999987 422 111111 111111110 1245555432111 1124569999999999
Q ss_pred eeecCccccccceeccccceEEE-CceEEEEEecCCCCcEEEEEECCCceEEEeCC----CCCCCCCcccccCCCcceEE
Q 036281 199 WRDLKGFEMRFDYMVDRIYNVYL-NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKG----PSVPQTTTYYQSVKTPWMLG 273 (371)
Q Consensus 199 Wr~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~----P~~~~~~~~~~~~~~~~~L~ 273 (371)
|+.++.. |.......++.+ +|.+|.+....... .+..||+.+.+|+.+.. |..... ...+
T Consensus 480 W~~~~~~----p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~----------~~a~ 544 (695)
T 2zwa_A 480 WSMIKSL----SHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSLV----------SAGL 544 (695)
T ss_dssp EEECCCC----SBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCCB----------SCEE
T ss_pred EEECCCC----CCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcccc----------eeEE
Confidence 9999743 332223455665 99999987654222 79999999999999863 333221 2223
Q ss_pred EeC---CeEEEEecC-----CCCCEEEEEEeeCCc------eeEEEEecCCCcceeeeEEeeCCEEEEEEc---------
Q 036281 274 TYD---DCLSLLYSD-----KFAHSFELWIMKGGF------WIKHLTFGPFIETYQPLGFWRKDEFLLESS--------- 330 (371)
Q Consensus 274 ~~~---g~L~l~~~~-----~~~~~~~iW~L~~~~------W~~~~~i~~~~~~~~~~~~~~~~~il~~~~--------- 330 (371)
.++ |+|+++.-. .....+.+|-++... |+++...++.+.......+.++++|++...
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCT
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCC
Confidence 333 889987631 112445555555555 777766433333334444555478887742
Q ss_pred CCeEEEEeCCCCeEEEEEEe
Q 036281 331 DKRVILYDSRYHEMRDLGIT 350 (371)
Q Consensus 331 ~~~l~~yd~~~~~~~~v~~~ 350 (371)
...+..||+++++|+.+.+.
T Consensus 625 ~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 625 TNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp TTSEEEEETTTTEEEECCCC
T ss_pred CCeEEEEECCCCeEEEeecc
Confidence 34699999999999976554
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.61 E-value=3.8e-05 Score=72.51 Aligned_cols=50 Identities=22% Similarity=0.304 Sum_probs=44.6
Q ss_pred ccCCCCCHHHHHHHHhcCCccccceeeecccchhhhcCChHHHHHHhccC
Q 036281 8 KTLGDLSDDMMIETLSRLPVKSLMRFKCVCISWCDLVKDPNFIYKHLKRD 57 (371)
Q Consensus 8 ~~~~~LP~dll~~IL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~~~ 57 (371)
..+..||+|++.+||+.|++++|.++.+|||+|+.++.++.+.+....+.
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~ 66 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 66 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTT
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeec
Confidence 34678999999999999999999999999999999999999888766443
No 17
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.58 E-value=7.4e-06 Score=74.06 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=118.5
Q ss_pred eEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCC-CCCCCCcceEEEEE
Q 036281 115 IFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQ-RDSFHDFSHVAVYN 193 (371)
Q Consensus 115 Ll~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~-~~~~~~~~~~~vy~ 193 (371)
.|++..+... .++||.|++|...|.+.. .++ .. .+... .. -+|+.+....... .........+++|+
T Consensus 17 ~i~~~GG~~~-~~yd~~~~~W~~~~~~~~-~~r----~~--~~~~~--~~--~~lyv~GG~~~~~~~~~~~~~~~~~~~d 84 (318)
T 2woz_A 17 LILLVNDTAA-VAYDPMENECYLTALAEQ-IPR----NH--SSIVT--QQ--NQVYVVGGLYVDEENKDQPLQSYFFQLD 84 (318)
T ss_dssp EEEEECSSEE-EEEETTTTEEEEEEECTT-SCS----SE--EEEEC--SS--SCEEEEESSCC-------CCCBEEEEEE
T ss_pred hhhhccccce-EEECCCCCceecccCCcc-CCc----cc--eEEEE--EC--CEEEEECCcccCccccCCCccccEEEEe
Confidence 3433333445 899999999988443221 111 11 12111 11 2344443211000 00001123489999
Q ss_pred cCCCceeecCccccccceeccccceEEECceEEEEEecCC----CCcEEEEEECCCceEEEeC-CCCCCCCCcccccCCC
Q 036281 194 FSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPD----YSKAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKT 268 (371)
Q Consensus 194 ~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~----~~~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~ 268 (371)
..+++|+.++.. |........+.++|.+|.+..... ....+-.||+.+.+|+.+. +|... .
T Consensus 85 ~~~~~W~~~~~~----p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~ 150 (318)
T 2woz_A 85 NVSSEWVGLPPL----PSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----------Y 150 (318)
T ss_dssp TTTTEEEECSCB----SSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE----------E
T ss_pred CCCCcEEECCCC----CccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc----------c
Confidence 999999998743 322223466788999999886431 2356899999999999884 34332 2
Q ss_pred cceEEEeCCeEEEEec--CCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEc------CCeEEEEe
Q 036281 269 PWMLGTYDDCLSLLYS--DKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS------DKRVILYD 338 (371)
Q Consensus 269 ~~~L~~~~g~L~l~~~--~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~------~~~l~~yd 338 (371)
....+..+|+|.++.- ......-++|+++- ..|++.-.+ |.+.......+ -+++|++... ...+..||
T Consensus 151 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd 228 (318)
T 2woz_A 151 GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFD 228 (318)
T ss_dssp SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEE
T ss_pred ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEE
Confidence 2345668999999652 11122234666665 789987533 22222222233 3678777642 24588999
Q ss_pred CCCCeEEEEE
Q 036281 339 SRYHEMRDLG 348 (371)
Q Consensus 339 ~~~~~~~~v~ 348 (371)
+++++|+.+.
T Consensus 229 ~~~~~W~~~~ 238 (318)
T 2woz_A 229 LKTNKWEVMT 238 (318)
T ss_dssp TTTCCEEECC
T ss_pred CCCCeEEECC
Confidence 9999999884
No 18
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.53 E-value=3.4e-05 Score=73.15 Aligned_cols=44 Identities=11% Similarity=0.306 Sum_probs=39.0
Q ss_pred cCCCCCHHHHHHHHhcCCccccceeeecccchhhhcCC-hHHHHH
Q 036281 9 TLGDLSDDMMIETLSRLPVKSLMRFKCVCISWCDLVKD-PNFIYK 52 (371)
Q Consensus 9 ~~~~LP~dll~~IL~rLP~ksl~r~r~VcK~W~~li~~-p~F~~~ 52 (371)
.+..||+|++.+||+.||+++|+++..|||+|+.++.+ +...+.
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~ 58 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKK 58 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHH
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 35679999999999999999999999999999999998 665444
No 19
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.45 E-value=3.3e-05 Score=70.84 Aligned_cols=148 Identities=12% Similarity=0.113 Sum_probs=87.7
Q ss_pred cceEEEEEcCCCceeecCccccccceecc-ccceEEECceEEEEEecCC---CCcEEEEEEC--CCceEEEeC-CCCCCC
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVD-RIYNVYLNGYCYWVVCRPD---YSKAILAFSM--SNEVFQEIK-GPSVPQ 258 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~---~~~~Il~fD~--~~e~~~~i~-~P~~~~ 258 (371)
...+++|+..+++|+.++.. |.... ....+.++|.+|.+..... ....+..||+ .+.+|+.+. +|....
T Consensus 167 ~~~v~~yd~~~~~W~~~~~~----p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~ 242 (357)
T 2uvk_A 167 NKFLLSFDPSTQQWSYAGES----PWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDG 242 (357)
T ss_dssp CCEEEEEETTTTEEEEEEEC----SSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTC
T ss_pred cccEEEEeCCCCcEEECCCC----CCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcc
Confidence 35899999999999998633 32211 2466888999998864211 1235777876 889999874 233221
Q ss_pred CCcccccCCCcceEEEeCCeEEEEecCC------------------CCCEEEEEEeeC--CceeEEEEecCCCcceeeeE
Q 036281 259 TTTYYQSVKTPWMLGTYDDCLSLLYSDK------------------FAHSFELWIMKG--GFWIKHLTFGPFIETYQPLG 318 (371)
Q Consensus 259 ~~~~~~~~~~~~~L~~~~g~L~l~~~~~------------------~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~ 318 (371)
. ....++..+|+|.++.-.. ....-++|+++- ..|++.-.+ |.+.... .+
T Consensus 243 ~--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~-~~ 312 (357)
T 2uvk_A 243 V--------AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL-SQGRAYG-VS 312 (357)
T ss_dssp C--------BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEEC-SSCCBSS-EE
T ss_pred c--------ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCC-CCCcccc-ee
Confidence 1 2345778899999965210 111234555554 889987654 3322222 22
Q ss_pred EeeCCEEEEEEc-------CCeEEEEeCCCCeEEEE
Q 036281 319 FWRKDEFLLESS-------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 319 ~~~~~~il~~~~-------~~~l~~yd~~~~~~~~v 347 (371)
+.-+++|++... ...+..+++++++|.+.
T Consensus 313 ~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 313 LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 334778877632 13588899999998765
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.39 E-value=7.1e-06 Score=77.45 Aligned_cols=49 Identities=24% Similarity=0.318 Sum_probs=42.0
Q ss_pred cccCCCCCHH----HHHHHHhcCCccccceeeecccchhhhcCChHHHHHHhc
Q 036281 7 VKTLGDLSDD----MMIETLSRLPVKSLMRFKCVCISWCDLVKDPNFIYKHLK 55 (371)
Q Consensus 7 ~~~~~~LP~d----ll~~IL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~ 55 (371)
...+..||+| |+..||+.|++++|.++.+|||+|+.++.++.+.+....
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~ 60 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIE 60 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHH
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 3445679999 999999999999999999999999999998876665443
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.65 E-value=0.00041 Score=69.24 Aligned_cols=216 Identities=9% Similarity=0.001 Sum_probs=117.2
Q ss_pred eecceEEEeec---CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 111 PYDGIFCLLKS---HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 111 s~~GLl~~~~~---~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
..+|.|.+.-+ ..+ .++||.|++|..+++.+..+ .. .+...-+ +-||+.+...... .....
T Consensus 251 ~~~g~lyv~GG~~~~~v-~~yd~~t~~W~~~~~~~~~R------~~--~s~~~~~---dg~iyv~GG~~~~----~~~~~ 314 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKT-SLYDSSSDSWIPGPDMQVAR------GY--QSSATMS---DGRVFTIGGSWSG----GVFEK 314 (656)
T ss_dssp CTTSCEEEECSSSTTCE-EEEEGGGTEEEECCCCSSCC------SS--CEEEECT---TSCEEEECCCCCS----SSCCC
T ss_pred CCCCCEEEeCCCCCCce-EEecCcCCceeECCCCCccc------cc--cceEEec---CCeEEEEeCcccC----Ccccc
Confidence 45776665542 356 99999999999998766421 11 1111111 1245555431111 12356
Q ss_pred eEEEEEcCCCceeecCccc-cccceeccccceEEECceEEEEEecCC------CCcEEEEEECCCceEEEeCCCCCCC--
Q 036281 188 HVAVYNFSTNSWRDLKGFE-MRFDYMVDRIYNVYLNGYCYWVVCRPD------YSKAILAFSMSNEVFQEIKGPSVPQ-- 258 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~-~~~~~~~~~~~~v~~~G~lywl~~~~~------~~~~Il~fD~~~e~~~~i~~P~~~~-- 258 (371)
.+|+|+..+++|+.++... .+++... ....+..+|.+|.+...+. ....+..||+.+++|.....+....
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~-~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTAD-KQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCC-TTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred cceEeCCCCCcceeCCCcccccccccc-ccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 7999999999999975321 1222221 1233446777777663321 2347899999999886432111100
Q ss_pred -CCcccccCCCcceEE--EeCCeEEEEecCC-------CCCEEEEEEeeC--CceeEEE--EecCCCcceeeeEEeeCCE
Q 036281 259 -TTTYYQSVKTPWMLG--TYDDCLSLLYSDK-------FAHSFELWIMKG--GFWIKHL--TFGPFIETYQPLGFWRKDE 324 (371)
Q Consensus 259 -~~~~~~~~~~~~~L~--~~~g~L~l~~~~~-------~~~~~~iW~L~~--~~W~~~~--~i~~~~~~~~~~~~~~~~~ 324 (371)
. . .......++ ..+|+|.++.-.. ....-.|++.+- ..|.+.. .+ |.+....-..+..+|+
T Consensus 394 ~~-~---~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~m-p~~R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 394 VA-P---DAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL-YFARTFHTSVVLPDGS 468 (656)
T ss_dssp EC-C---CCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCC-SSCCBSCEEEECTTSC
T ss_pred cC-C---CCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCC-CCCcccCCeEECCCCC
Confidence 0 0 000111111 2588888875211 111124444443 6788765 22 2222333334445888
Q ss_pred EEEEEc------------CCeEEEEeCCCCeEEEEE
Q 036281 325 FLLESS------------DKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 325 il~~~~------------~~~l~~yd~~~~~~~~v~ 348 (371)
|++... ...+..||+++++|+.+.
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~ 504 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN 504 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceeecC
Confidence 888742 145899999999999864
No 22
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.62 E-value=1.2e-05 Score=70.57 Aligned_cols=49 Identities=29% Similarity=0.323 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHhcCCccccceeeecccchhhhcCChHHHHHHhccCC
Q 036281 10 LGDLSDDMMIETLSRLPVKSLMRFKCVCISWCDLVKDPNFIYKHLKRDD 58 (371)
Q Consensus 10 ~~~LP~dll~~IL~rLP~ksl~r~r~VcK~W~~li~~p~F~~~~~~~~~ 58 (371)
+..||+|++..||+.|++++|.++.+|||+|+.+..++.-.+.++.+..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 5679999999999999999999999999999999999999988887765
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.61 E-value=0.0014 Score=65.38 Aligned_cols=193 Identities=11% Similarity=0.058 Sum_probs=108.3
Q ss_pred eEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeecCc
Q 036281 125 INLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDLKG 204 (371)
Q Consensus 125 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~~~ 204 (371)
+.++||.|++|..++..+..+.. ......+..+ -+++.+... ....+++|+..++.|..++.
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~----~~~~~~~~~~-----g~lyv~GG~---------~~~~v~~yd~~t~~W~~~~~ 282 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDM----FCPGISMDGN-----GQIVVTGGN---------DAKKTSLYDSSSDSWIPGPD 282 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCC----SSCEEEECTT-----SCEEEECSS---------STTCEEEEEGGGTEEEECCC
T ss_pred EEEEeCCCCcEEeCcccCCCCCC----ccccccCCCC-----CCEEEeCCC---------CCCceEEecCcCCceeECCC
Confidence 38999999999998765432111 1111111111 245555421 12379999999999999864
Q ss_pred cccccceeccccceEEE-CceEEEEEecCC---CCcEEEEEECCCceEEEeC----CCCCCCCCcccccCCCcceEEEeC
Q 036281 205 FEMRFDYMVDRIYNVYL-NGYCYWVVCRPD---YSKAILAFSMSNEVFQEIK----GPSVPQTTTYYQSVKTPWMLGTYD 276 (371)
Q Consensus 205 ~~~~~~~~~~~~~~v~~-~G~lywl~~~~~---~~~~Il~fD~~~e~~~~i~----~P~~~~~~~~~~~~~~~~~L~~~~ 276 (371)
. +........+.+ +|++|-+..... ....+-.||+.+.+|+.++ .|..... ...+...+
T Consensus 283 ~----~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~---------~~~~~~~~ 349 (656)
T 1k3i_A 283 M----QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD---------KQGLYRSD 349 (656)
T ss_dssp C----SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC---------TTGGGTTT
T ss_pred C----CccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc---------ccceeecC
Confidence 3 332223455677 999999876321 2356889999999999873 1221111 00111233
Q ss_pred CeEEEEec-------CCCCCEEEEEEeeCCceeEEEEecCC-------CcceeeeEE-eeCCEEEEEEcC---------C
Q 036281 277 DCLSLLYS-------DKFAHSFELWIMKGGFWIKHLTFGPF-------IETYQPLGF-WRKDEFLLESSD---------K 332 (371)
Q Consensus 277 g~L~l~~~-------~~~~~~~~iW~L~~~~W~~~~~i~~~-------~~~~~~~~~-~~~~~il~~~~~---------~ 332 (371)
+++.++.. ......++.|-.+...|.......+. ......+.+ ..+++|++.... .
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 44433321 01345666666666667654332221 101111111 137788887431 1
Q ss_pred ---eEEEEeCCCCeEEEEE
Q 036281 333 ---RVILYDSRYHEMRDLG 348 (371)
Q Consensus 333 ---~l~~yd~~~~~~~~v~ 348 (371)
.+..||+++++|.++.
T Consensus 430 ~~~~v~~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFA 448 (656)
T ss_dssp CEEEEECCSTTSCCEEEEC
T ss_pred cceEEEcCCCCCCCeeEEc
Confidence 6889999999998874
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.49 E-value=0.0017 Score=65.25 Aligned_cols=152 Identities=6% Similarity=-0.108 Sum_probs=96.8
Q ss_pred cceEEEEEcCCCceeecC-ccc-cccceeccccceEEE--CceEEEEEecCC---CCcEEEEEECCCceEEEeC-CCCCC
Q 036281 186 FSHVAVYNFSTNSWRDLK-GFE-MRFDYMVDRIYNVYL--NGYCYWVVCRPD---YSKAILAFSMSNEVFQEIK-GPSVP 257 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~-~~~-~~~~~~~~~~~~v~~--~G~lywl~~~~~---~~~~Il~fD~~~e~~~~i~-~P~~~ 257 (371)
...+++|+..+++|+.++ ..+ ..+|........+.+ +|.+|.+..... ....+-.||+.+.+|+.+. +|...
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R 490 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTR 490 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCc
Confidence 456899999999999986 310 112332224566788 999999876442 1245899999999999884 34322
Q ss_pred CCCcccccCCCcceEEEe-CCeEEEEecCCCCCEEEEEEeeC--CceeEEEEec--CCCcceeeeEE-eeC-CEEEEEEc
Q 036281 258 QTTTYYQSVKTPWMLGTY-DDCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFG--PFIETYQPLGF-WRK-DEFLLESS 330 (371)
Q Consensus 258 ~~~~~~~~~~~~~~L~~~-~g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~--~~~~~~~~~~~-~~~-~~il~~~~ 330 (371)
.....+.. +|+|+++.-..... ++|+.+- ..|+..-... |.+.......+ ..+ ++|++...
T Consensus 491 ----------~~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 491 ----------FRHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp ----------BSCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECC
T ss_pred ----------ccceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECC
Confidence 23345554 99999976322222 6777765 8898865432 22222222222 223 67877642
Q ss_pred --------CCeEEEEeCCCCe------EEEEEE
Q 036281 331 --------DKRVILYDSRYHE------MRDLGI 349 (371)
Q Consensus 331 --------~~~l~~yd~~~~~------~~~v~~ 349 (371)
...+..||+++++ |+.+.-
T Consensus 559 ~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred cCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 2469999999999 777754
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.40 E-value=3.1e-05 Score=70.34 Aligned_cols=44 Identities=23% Similarity=0.483 Sum_probs=38.5
Q ss_pred hcccCCCCCHHHHHHHHhcCCccccceeeecccchhhhcCChHH
Q 036281 6 RVKTLGDLSDDMMIETLSRLPVKSLMRFKCVCISWCDLVKDPNF 49 (371)
Q Consensus 6 ~~~~~~~LP~dll~~IL~rLP~ksl~r~r~VcK~W~~li~~p~F 49 (371)
....+..||+|++.+||.+|+.+++.+++.|||+|+.++.+|..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 34568999999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.60 E-value=0.00034 Score=68.60 Aligned_cols=36 Identities=17% Similarity=0.368 Sum_probs=29.4
Q ss_pred ccCCCCCHHHHHHHHhcCC-ccccceeeecccchhhh
Q 036281 8 KTLGDLSDDMMIETLSRLP-VKSLMRFKCVCISWCDL 43 (371)
Q Consensus 8 ~~~~~LP~dll~~IL~rLP-~ksl~r~r~VcK~W~~l 43 (371)
..++.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4578899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.21 E-value=0.00072 Score=66.30 Aligned_cols=34 Identities=18% Similarity=0.310 Sum_probs=31.7
Q ss_pred CCCCCHHHHHHHHhcC-Cccccceeeecccchhhh
Q 036281 10 LGDLSDDMMIETLSRL-PVKSLMRFKCVCISWCDL 43 (371)
Q Consensus 10 ~~~LP~dll~~IL~rL-P~ksl~r~r~VcK~W~~l 43 (371)
...||||++.+||.+| |.+++.++..|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999887
No 28
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.52 E-value=3.2 Score=35.43 Aligned_cols=191 Identities=9% Similarity=-0.037 Sum_probs=95.6
Q ss_pred EEeeecceEEEee--cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCC
Q 036281 108 HIGPYDGIFCLLK--SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHD 185 (371)
Q Consensus 108 ~~~s~~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (371)
+....+|.+.+.. ...+ +++|| +++......+.. .....++.+|+.. ++.... . .
T Consensus 104 i~~~~~g~l~v~~~~~~~i-~~~d~-~g~~~~~~~~~~--------~~~~~~i~~~~~g---~l~v~~---~-------~ 160 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRI-GRITD-DGKIREYELPNK--------GSYPSFITLGSDN---ALWFTE---N-------Q 160 (299)
T ss_dssp EEECTTSCEEEEETTTTEE-EEECT-TCCEEEEECSST--------TCCEEEEEECTTS---CEEEEE---T-------T
T ss_pred eEECCCCCEEEEecCCceE-EEECC-CCCEEEecCCCC--------CCCCceEEEcCCC---CEEEEe---C-------C
Confidence 3334467666655 3355 89999 766554432211 1122566666543 222211 0 0
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYY 263 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (371)
...+.+|+. ++........ .... ...++.+ +|.+|+.... ...|..+|. +.++..+.+|....
T Consensus 161 ~~~i~~~~~-~g~~~~~~~~-~~~~----~~~~i~~~~~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~----- 225 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEFKIP-TPAS----GPVGITKGNDDALWFVEII---GNKIGRITT-SGEITEFKIPTPNA----- 225 (299)
T ss_dssp TTEEEEECT-TCCEEEEECS-STTC----CEEEEEECTTSSEEEEETT---TTEEEEECT-TCCEEEEECSSTTC-----
T ss_pred CCEEEEEcC-CCcEEEeeCC-CCCC----cceeEEECCCCCEEEEccC---CceEEEECC-CCcEEEEECCCCCC-----
Confidence 345666776 5555543110 0010 1123444 4787554432 347999999 77777666653221
Q ss_pred ccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCC
Q 036281 264 QSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYH 342 (371)
Q Consensus 264 ~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~ 342 (371)
....+.. -+|.|.+.. .....+.+|-.+ .. ...+.+.........+.+ .+|.+++....+++..||++++
T Consensus 226 ----~~~~i~~~~~g~l~v~~--~~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 226 ----RPHAITAGAGIDLWFTE--WGANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKD 296 (299)
T ss_dssp ----CEEEEEECSTTCEEEEE--TTTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC--
T ss_pred ----CceeEEECCCCCEEEec--cCCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCcc
Confidence 1223443 467877654 244556655542 21 122222211112233455 7888999876789999999988
Q ss_pred eEE
Q 036281 343 EMR 345 (371)
Q Consensus 343 ~~~ 345 (371)
+++
T Consensus 297 ~~~ 299 (299)
T 2z2n_A 297 NME 299 (299)
T ss_dssp ---
T ss_pred cCC
Confidence 754
No 29
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=92.73 E-value=4.9 Score=35.44 Aligned_cols=65 Identities=9% Similarity=0.175 Sum_probs=43.9
Q ss_pred CCeEEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeC---CEEEEE-EcCCeEEEEeCCCC
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRK---DEFLLE-SSDKRVILYDSRYH 342 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il~~-~~~~~l~~yd~~~~ 342 (371)
+|.+.+.. .....+.||-+.. ..|.....+..+.....-+.+.++ +.+++. ..++.+.+||++++
T Consensus 171 ~~~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTG--GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEE--ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCEEEEE--eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 46665554 3567899999986 557776666544433444566666 676665 56778999999886
No 30
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.66 E-value=5.9 Score=36.16 Aligned_cols=195 Identities=12% Similarity=0.123 Sum_probs=93.6
Q ss_pred eecceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEE
Q 036281 111 PYDGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVA 190 (371)
Q Consensus 111 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (371)
|.+++|.+..++.+ +|||..|++...+-..... ......+.+.+. +.|-+++- . .-.+.
T Consensus 114 S~~n~lAvgld~tV-~lWd~~tg~~~~~~~~~~~-------~~~V~sv~fspd-g~~lasgs----~--------Dg~v~ 172 (420)
T 4gga_A 114 SSGNVLAVALDNSV-YLWSASSGDILQLLQMEQP-------GEYISSVAWIKE-GNYLAVGT----S--------SAEVQ 172 (420)
T ss_dssp CTTSEEEEEETTEE-EEEETTTCCEEEEEECCST-------TCCEEEEEECTT-SSEEEEEE----T--------TSCEE
T ss_pred CCCCEEEEEeCCEE-EEEECCCCCEEEEEEecCC-------CCcEEEEEECCC-CCEEEEEE----C--------CCeEE
Confidence 55777777777777 9999999987654322210 111244555553 34433221 1 45578
Q ss_pred EEEcCCCcee-ecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCc
Q 036281 191 VYNFSTNSWR-DLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTP 269 (371)
Q Consensus 191 vy~~~~~~Wr-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~ 269 (371)
+++..++.-. ..... .. ....+..+|.+-..... ...+..+|..........+..... ..
T Consensus 173 iWd~~~~~~~~~~~~h--~~-----~v~~~s~~~~~l~sgs~---d~~i~~~d~~~~~~~~~~~~~h~~---------~~ 233 (420)
T 4gga_A 173 LWDVQQQKRLRNMTSH--SA-----RVGSLSWNSYILSSGSR---SGHIHHHDVRVAEHHVATLSGHSQ---------EV 233 (420)
T ss_dssp EEETTTTEEEEEECCC--SS-----CEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCSS---------CE
T ss_pred EEEcCCCcEEEEEeCC--CC-----ceEEEeeCCCEEEEEeC---CCceeEeeecccceeeEEeccccc---------ce
Confidence 8888775321 11110 00 11223444433222222 246667776654333222221111 11
Q ss_pred ceEE-EeCCeEEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEee-CCEEEEE-E--cCCeEEEEeCCCC
Q 036281 270 WMLG-TYDDCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWR-KDEFLLE-S--SDKRVILYDSRYH 342 (371)
Q Consensus 270 ~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~-~--~~~~l~~yd~~~~ 342 (371)
..+. ..+|...+.. .....+.||-... ..+...............+.+.. ++.++.. . .++.+.+||++++
T Consensus 234 ~~~~~~~~g~~l~s~--~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 234 CGLRWAPDGRHLASG--GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp EEEEECTTSSEEEEE--ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eeeeecCCCCeeeee--eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 1222 2345544433 3567888998875 22222222222222222333333 3334443 2 3678999999988
Q ss_pred eEEEE
Q 036281 343 EMRDL 347 (371)
Q Consensus 343 ~~~~v 347 (371)
+....
T Consensus 312 ~~~~~ 316 (420)
T 4gga_A 312 ACLSA 316 (420)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 76544
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.48 E-value=7.8 Score=38.76 Aligned_cols=65 Identities=9% Similarity=0.170 Sum_probs=43.0
Q ss_pred CeEEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeC---CEEEEE-EcCCeEEEEeCCCCe
Q 036281 277 DCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRK---DEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il~~-~~~~~l~~yd~~~~~ 343 (371)
|.+.+.. .....+.||-+.. ..+.....+..+..-..-+.+.++ +.+++. ..++.+.+||+++++
T Consensus 170 ~~~l~sg--s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 170 SRKFVTG--GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp GCCEEEE--ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCEEEEE--ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 4544444 3567899999987 556666666554433444556666 776665 457789999998863
No 32
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=88.23 E-value=9 Score=34.22 Aligned_cols=118 Identities=5% Similarity=-0.056 Sum_probs=64.7
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCCce--EEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV--FQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFEL 293 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~--~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~i 293 (371)
..++..+|.+|.....+ .|.+||..+.+ |+. .++..... ...............+|.|.+... ...+..
T Consensus 47 ~~p~v~~~~v~~~~~~g----~v~a~d~~tG~~~W~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~~~---~g~l~a 117 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG----LVKALNADDGKEIWSV-SLAEKDGW-FSKEPALLSGGVTVSGGHVYIGSE---KAQVYA 117 (376)
T ss_dssp CCCEEETTEEEEECTTS----EEEEEETTTCCEEEEE-ECCC---C-CSCCCCCEEEEEEEETTEEEEEET---TSEEEE
T ss_pred eccEEECCEEEEEcCCC----eEEEEEccCCceeeee-cCcccccc-ccccCcccccCceEeCCEEEEEcC---CCEEEE
Confidence 36788999999876554 89999997654 443 33321100 000000012334556777777542 233333
Q ss_pred EEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEE
Q 036281 294 WIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 294 W~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v 347 (371)
+-.+. ..|.... .. .....|.. .++.+++...++.++.+|.++++..+-
T Consensus 118 ~d~~tG~~~W~~~~--~~-~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 118 LNTSDGTVAWQTKV--AG-EALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EETTTCCEEEEEEC--SS-CCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEEeC--CC-ceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 33332 3454322 11 11222332 367788877788999999999986655
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=87.00 E-value=15 Score=32.20 Aligned_cols=145 Identities=9% Similarity=0.036 Sum_probs=80.9
Q ss_pred cceEEEEEcCCCce-eecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEE-EeCCCCCCCCCccc
Q 036281 186 FSHVAVYNFSTNSW-RDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQ-EIKGPSVPQTTTYY 263 (371)
Q Consensus 186 ~~~~~vy~~~~~~W-r~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~-~i~~P~~~~~~~~~ 263 (371)
.-.+.+++..++.- +.++.. ..|.. -.+.-+|.+|..... ...|..+|+.+.+.. .++.+.....
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~--~~p~~----i~~~~~g~lyv~~~~---~~~v~~iD~~t~~~~~~i~~g~~~~~---- 129 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGF--TSPRY----IHFLSDEKAYVTQIW---DYRIFIINPKTYEITGYIECPDMDME---- 129 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECC--SSEEE----EEEEETTEEEEEEBS---CSEEEEEETTTTEEEEEEECTTCCTT----
T ss_pred CCEEEEEECcccEEEEEcCCC--CCCcE----EEEeCCCeEEEEECC---CCeEEEEECCCCeEEEEEEcCCcccc----
Confidence 34678888887654 223211 11211 112257888877632 248999999998764 5665542110
Q ss_pred ccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcC-----------C
Q 036281 264 QSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSD-----------K 332 (371)
Q Consensus 264 ~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~-----------~ 332 (371)
......+..-+|+|.+... .....+.++-++.....+...+... ..-+.+.++|++++.... .
T Consensus 130 --~~~p~~i~~~~~~lyv~~~-~~~~~v~viD~~t~~~~~~i~~g~~---p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 130 --SGSTEQMVQYGKYVYVNCW-SYQNRILKIDTETDKVVDELTIGIQ---PTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp --TCBCCCEEEETTEEEEEEC-TTCCEEEEEETTTTEEEEEEECSSC---BCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred --CCCcceEEEECCEEEEEcC-CCCCEEEEEECCCCeEEEEEEcCCC---ccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 0011223446888887652 1255666665544333333332211 123556678898887532 5
Q ss_pred eEEEEeCCCCeEE-EEEE
Q 036281 333 RVILYDSRYHEMR-DLGI 349 (371)
Q Consensus 333 ~l~~yd~~~~~~~-~v~~ 349 (371)
.+..+|++++++. .+.+
T Consensus 204 ~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEec
Confidence 8999999999876 4444
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.58 E-value=18 Score=32.55 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=93.7
Q ss_pred cceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEE
Q 036281 113 DGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVY 192 (371)
Q Consensus 113 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (371)
+.++....+..+ .|||..+++...+-.... ......+.+.+. +.+-++.- . .-.+.+|
T Consensus 104 ~~l~~~~~d~~v-~lw~~~~~~~~~~~~~~~--------~~~v~~v~~s~~-~~~l~~~~----~--------dg~i~iw 161 (401)
T 4aez_A 104 LNVVAVALERNV-YVWNADSGSVSALAETDE--------STYVASVKWSHD-GSFLSVGL----G--------NGLVDIY 161 (401)
T ss_dssp TSEEEEEETTEE-EEEETTTCCEEEEEECCT--------TCCEEEEEECTT-SSEEEEEE----T--------TSCEEEE
T ss_pred CCEEEEECCCeE-EEeeCCCCcEeEeeecCC--------CCCEEEEEECCC-CCEEEEEC----C--------CCeEEEE
Confidence 445555555666 999999988665433221 112245556553 33322221 1 3457888
Q ss_pred EcCCCceee-cCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcce
Q 036281 193 NFSTNSWRD-LKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWM 271 (371)
Q Consensus 193 ~~~~~~Wr~-~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~ 271 (371)
+..++.-.. .... .- .-..+..+|.+...... ...|..+|+....-....+..... ....
T Consensus 162 d~~~~~~~~~~~~~--~~-----~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~---------~v~~ 222 (401)
T 4aez_A 162 DVESQTKLRTMAGH--QA-----RVGCLSWNRHVLSSGSR---SGAIHHHDVRIANHQIGTLQGHSS---------EVCG 222 (401)
T ss_dssp ETTTCCEEEEECCC--SS-----CEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCSS---------CEEE
T ss_pred ECcCCeEEEEecCC--CC-----ceEEEEECCCEEEEEcC---CCCEEEEecccCcceeeEEcCCCC---------CeeE
Confidence 887754221 1110 00 11234445543333333 357888998743221111111111 1122
Q ss_pred EEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCC-EEEEEE---cCCeEEEEeCCCCeEE
Q 036281 272 LGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKD-EFLLES---SDKRVILYDSRYHEMR 345 (371)
Q Consensus 272 L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~~---~~~~l~~yd~~~~~~~ 345 (371)
+.. -+|.+.+.. .....+.||-+.. ......+........-+.+.+++ .+++.. .++.+.+||+++++..
T Consensus 223 ~~~~~~~~~l~s~--~~d~~v~iwd~~~--~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 223 LAWRSDGLQLASG--GNDNVVQIWDARS--SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp EEECTTSSEEEEE--ETTSCEEEEETTC--SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred EEEcCCCCEEEEE--eCCCeEEEccCCC--CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 222 255555544 3567899998875 22333443333233445555544 455543 3788999999887653
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=84.32 E-value=18 Score=30.58 Aligned_cols=204 Identities=13% Similarity=0.149 Sum_probs=102.5
Q ss_pred EEeeecceEEEee--cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCC
Q 036281 108 HIGPYDGIFCLLK--SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHD 185 (371)
Q Consensus 108 ~~~s~~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~ 185 (371)
+..+.+|-+.+.. ...+ .++||..+....++........ .....++.+++..+. ++... .. .
T Consensus 35 v~~~~~g~l~v~~~~~~~i-~~~d~~g~~~~~~~~~~~~~~~----~~~p~~i~~~~~~g~--l~v~~--~~-------~ 98 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRI-QIFDKEGRFKFQFGECGKRDSQ----LLYPNRVAVVRNSGD--IIVTE--RS-------P 98 (286)
T ss_dssp EEECTTCCEEEEEGGGTEE-EEECTTSCEEEEECCBSSSTTC----BSSEEEEEEETTTTE--EEEEE--CG-------G
T ss_pred EEECCCCCEEEEECCCCEE-EEECCCCcEEEEecccCCCccc----ccCceEEEEEcCCCe--EEEEc--CC-------C
Confidence 3334567666654 3455 8999886655555532211000 112255565433222 22221 00 0
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYY 263 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (371)
...+.+|+..+..-+.........+ .++.+ +|.+|..... ...|..||...+....+..+....
T Consensus 99 ~~~i~~~d~~g~~~~~~~~~~~~~~------~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~----- 164 (286)
T 1q7f_A 99 THQIQIYNQYGQFVRKFGATILQHP------RGVTVDNKGRIIVVECK---VMRVIIFDQNGNVLHKFGCSKHLE----- 164 (286)
T ss_dssp GCEEEEECTTSCEEEEECTTTCSCE------EEEEECTTSCEEEEETT---TTEEEEECTTSCEEEEEECTTTCS-----
T ss_pred CCEEEEECCCCcEEEEecCccCCCc------eEEEEeCCCCEEEEECC---CCEEEEEcCCCCEEEEeCCCCccC-----
Confidence 3456777744332222221100111 22333 5776654432 357999998776666654332211
Q ss_pred ccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceee--eEEeeCCEEEEEEc-CC-eEEEEe
Q 036281 264 QSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQP--LGFWRKDEFLLESS-DK-RVILYD 338 (371)
Q Consensus 264 ~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~-~~-~l~~yd 338 (371)
....+.. -+|.|.+.. .....+.+|-.+. .. ...+........| +++..+|.+++... ++ .+..||
T Consensus 165 ----~p~~i~~~~~g~l~v~~--~~~~~i~~~~~~g-~~--~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~ 235 (286)
T 1q7f_A 165 ----FPNGVVVNDKQEIFISD--NRAHCVKVFNYEG-QY--LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 235 (286)
T ss_dssp ----SEEEEEECSSSEEEEEE--GGGTEEEEEETTC-CE--EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred ----CcEEEEECCCCCEEEEE--CCCCEEEEEcCCC-CE--EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEEC
Confidence 1223443 467876654 2456777776543 22 2233222112334 55566888888864 43 899999
Q ss_pred CCCCeEEEEEEe
Q 036281 339 SRYHEMRDLGIT 350 (371)
Q Consensus 339 ~~~~~~~~v~~~ 350 (371)
.+.+.++.+...
T Consensus 236 ~~g~~~~~~~~~ 247 (286)
T 1q7f_A 236 QDGQLISALESK 247 (286)
T ss_dssp TTSCEEEEEEES
T ss_pred CCCCEEEEEccc
Confidence 887777777553
No 36
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=82.59 E-value=24 Score=30.74 Aligned_cols=73 Identities=11% Similarity=0.101 Sum_probs=45.8
Q ss_pred eCCe-EEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEeeCCEEE-EEEc-CCeEEEE--eCCCCeEEEEE
Q 036281 275 YDDC-LSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFWRKDEFL-LESS-DKRVILY--DSRYHEMRDLG 348 (371)
Q Consensus 275 ~~g~-L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~-~~~l~~y--d~~~~~~~~v~ 348 (371)
-+|+ |++.. .....+.+|-++. ..+.....+........-+++.++|+.+ +... ++.+.+| |.++++++.++
T Consensus 249 pdG~~l~v~~--~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 249 HDGHFLYVSN--RGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp TTSCEEEEEE--ETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEEe--CCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 4676 44443 3568899999975 4455555553322223446677788754 4443 4677777 88899998775
Q ss_pred E
Q 036281 349 I 349 (371)
Q Consensus 349 ~ 349 (371)
-
T Consensus 327 ~ 327 (347)
T 3hfq_A 327 K 327 (347)
T ss_dssp E
T ss_pred c
Confidence 4
No 37
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=81.70 E-value=23 Score=29.89 Aligned_cols=188 Identities=12% Similarity=0.158 Sum_probs=96.3
Q ss_pred eecceEEEee---cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 111 PYDGIFCLLK---SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 111 s~~GLl~~~~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
..+|-+.+.. ...+ .++|+..+....+..... ....++.+++.. . ++... . ...
T Consensus 86 ~~~g~l~v~~~~~~~~i-~~~d~~g~~~~~~~~~~~---------~~~~~i~~~~~g-~--l~v~~---~-------~~~ 142 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQI-QIYNQYGQFVRKFGATIL---------QHPRGVTVDNKG-R--IIVVE---C-------KVM 142 (286)
T ss_dssp TTTTEEEEEECGGGCEE-EEECTTSCEEEEECTTTC---------SCEEEEEECTTS-C--EEEEE---T-------TTT
T ss_pred cCCCeEEEEcCCCCCEE-EEECCCCcEEEEecCccC---------CCceEEEEeCCC-C--EEEEE---C-------CCC
Confidence 3567666665 3455 889965554444433221 112566677643 2 22221 0 134
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccccc
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~ 265 (371)
.+.+|+..+..-+..... .... ...++.+ +|.+|..... ...|..||...+....+..+....
T Consensus 143 ~i~~~~~~g~~~~~~~~~-~~~~----~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~~~~~g~~~------- 207 (286)
T 1q7f_A 143 RVIIFDQNGNVLHKFGCS-KHLE----FPNGVVVNDKQEIFISDNR---AHCVKVFNYEGQYLRQIGGEGITN------- 207 (286)
T ss_dssp EEEEECTTSCEEEEEECT-TTCS----SEEEEEECSSSEEEEEEGG---GTEEEEEETTCCEEEEESCTTTSC-------
T ss_pred EEEEEcCCCCEEEEeCCC-CccC----CcEEEEECCCCCEEEEECC---CCEEEEEcCCCCEEEEEccCCccC-------
Confidence 566777554433322110 0110 1123444 4786654432 358999999777666664432111
Q ss_pred CCCcceEEE-eCCeEEEEecCCCCC-EEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCC
Q 036281 266 VKTPWMLGT-YDDCLSLLYSDKFAH-SFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRY 341 (371)
Q Consensus 266 ~~~~~~L~~-~~g~L~l~~~~~~~~-~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~ 341 (371)
....+.. -+|.|.+... ... .+.+|-.+. .-..............-+++..+|.+++...++.+.+|+...
T Consensus 208 --~p~~i~~d~~G~l~v~~~--~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 208 --YPIGVGINSNGEILIADN--HNNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp --SEEEEEECTTCCEEEEEC--SSSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred --CCcEEEECCCCCEEEEeC--CCCEEEEEECCCC-CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 1223443 4688777652 333 788886432 222222221111112345666789988887777899998754
No 38
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=81.40 E-value=25 Score=30.14 Aligned_cols=195 Identities=9% Similarity=0.068 Sum_probs=95.2
Q ss_pred cceEEEee--cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEE
Q 036281 113 DGIFCLLK--SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVA 190 (371)
Q Consensus 113 ~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (371)
+|-|.+.+ ...+ +.+||.+++...+..+. . ..++.+++..+ + ++.. ...+.
T Consensus 24 ~~~l~~~d~~~~~i-~~~d~~~~~~~~~~~~~---------~--~~~i~~~~dG~-l-~v~~-------------~~~l~ 76 (297)
T 3g4e_A 24 SNSLLFVDIPAKKV-CRWDSFTKQVQRVTMDA---------P--VSSVALRQSGG-Y-VATI-------------GTKFC 76 (297)
T ss_dssp TTEEEEEETTTTEE-EEEETTTCCEEEEECSS---------C--EEEEEEBTTSS-E-EEEE-------------TTEEE
T ss_pred CCEEEEEECCCCEE-EEEECCCCcEEEEeCCC---------c--eEEEEECCCCC-E-EEEE-------------CCeEE
Confidence 45554444 3455 99999998765443222 1 14566665443 2 2221 23578
Q ss_pred EEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecC--------CCCcEEEEEECCCceEEEeCCCCCCCCC
Q 036281 191 VYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRP--------DYSKAILAFSMSNEVFQEIKGPSVPQTT 260 (371)
Q Consensus 191 vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~--------~~~~~Il~fD~~~e~~~~i~~P~~~~~~ 260 (371)
+|+..++.++.+.......+.. ....+.+ +|.+|+-.... .....|..+|.... ...+. ....
T Consensus 77 ~~d~~~g~~~~~~~~~~~~~~~--~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~--~~~~-- 149 (297)
T 3g4e_A 77 ALNWKEQSAVVLATVDNDKKNN--RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYF--DQVD-- 149 (297)
T ss_dssp EEETTTTEEEEEEECCTTCSSE--EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEE--EEES--
T ss_pred EEECCCCcEEEEEecCCCCCCC--CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEe--eccc--
Confidence 8888888877654221111111 1122333 58866544321 01346788877532 22211 0000
Q ss_pred cccccCCCcceEEE-eCCe-EEEEecCCCCCEEEEEEee-C-CceeEE---EEecCCCcceeeeEEeeCCEEEEEE-cCC
Q 036281 261 TYYQSVKTPWMLGT-YDDC-LSLLYSDKFAHSFELWIMK-G-GFWIKH---LTFGPFIETYQPLGFWRKDEFLLES-SDK 332 (371)
Q Consensus 261 ~~~~~~~~~~~L~~-~~g~-L~l~~~~~~~~~~~iW~L~-~-~~W~~~---~~i~~~~~~~~~~~~~~~~~il~~~-~~~ 332 (371)
..-.+.. -+|+ |++.. .....+.+|-++ + ...... ..+........-+++..+|.|++.. ..+
T Consensus 150 -------~pngi~~spdg~~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~ 220 (297)
T 3g4e_A 150 -------ISNGLDWSLDHKIFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG 220 (297)
T ss_dssp -------BEEEEEECTTSCEEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT
T ss_pred -------cccceEEcCCCCEEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC
Confidence 0111222 2454 44443 234566666654 2 332211 1111111122234556688888875 456
Q ss_pred eEEEEeCCCCe-EEEEEEe
Q 036281 333 RVILYDSRYHE-MRDLGIT 350 (371)
Q Consensus 333 ~l~~yd~~~~~-~~~v~~~ 350 (371)
.+..||+++++ +..+...
T Consensus 221 ~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 221 RVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp EEEEECTTTCCEEEEEECS
T ss_pred EEEEEcCCCceEEEEEECC
Confidence 79999999665 4566554
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=81.22 E-value=12 Score=32.73 Aligned_cols=103 Identities=10% Similarity=-0.011 Sum_probs=57.5
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcce
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETY 314 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~ 314 (371)
..+..+|..+.++..+........ ...+. .-+|+|++.........+.+|-++...+.....+.....-.
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~---------p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQN---------PTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSC---------CCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred EEEEEEcCCCCeEEEeeeeeccCC---------cceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC
Confidence 457788888888776543221111 11233 24788555442233578899998765555554432221112
Q ss_pred eeeEEeeCCEE-EEEE-cCCeEEEEeCC-CCeEEEE
Q 036281 315 QPLGFWRKDEF-LLES-SDKRVILYDSR-YHEMRDL 347 (371)
Q Consensus 315 ~~~~~~~~~~i-l~~~-~~~~l~~yd~~-~~~~~~v 347 (371)
.-+++.++|+. ++.. .++.+.+||+. +++.+.+
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLT 124 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeec
Confidence 23566778874 4444 45779999985 4455444
No 40
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.70 E-value=30 Score=30.65 Aligned_cols=112 Identities=12% Similarity=-0.006 Sum_probs=59.7
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCCce--EEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV--FQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFEL 293 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~--~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~i 293 (371)
..++..+|.+|.-...+ .|.+||..+.+ |+. +++..... .....+|.+.+.. ....+..
T Consensus 97 ~~~~~~~~~v~v~~~~g----~l~a~d~~tG~~~W~~-~~~~~~~~-----------~p~~~~~~v~v~~---~~g~l~~ 157 (376)
T 3q7m_A 97 GGVTVSGGHVYIGSEKA----QVYALNTSDGTVAWQT-KVAGEALS-----------RPVVSDGLVLIHT---SNGQLQA 157 (376)
T ss_dssp EEEEEETTEEEEEETTS----EEEEEETTTCCEEEEE-ECSSCCCS-----------CCEEETTEEEEEC---TTSEEEE
T ss_pred cCceEeCCEEEEEcCCC----EEEEEECCCCCEEEEE-eCCCceEc-----------CCEEECCEEEEEc---CCCeEEE
Confidence 35567788888766554 89999997654 433 33332211 1123456555533 1222222
Q ss_pred EEeeC--CceeEEEEecCC--CcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEEE
Q 036281 294 WIMKG--GFWIKHLTFGPF--IETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 294 W~L~~--~~W~~~~~i~~~--~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v~ 348 (371)
+-.+. ..|.....-... .....|.. .++.+++...++.++.+|+++++..+-.
T Consensus 158 ~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 158 LNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp EETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEE
T ss_pred EECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 22222 345443211111 01123332 2677777767788999999999876653
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=79.43 E-value=16 Score=33.38 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=31.2
Q ss_pred CCCEEEEEEeeCCceeEEE-EecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 287 FAHSFELWIMKGGFWIKHL-TFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~-~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
.+..+.||-+....-.... ....+..-..-+++..+|..|+. ..++.+.+||+++...
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 5678889987651111000 00111111222344557765554 5678899999987653
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.34 E-value=27 Score=29.32 Aligned_cols=110 Identities=9% Similarity=0.018 Sum_probs=60.9
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF 300 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~ 300 (371)
+|.+|+.... ...|..||.. .++..+.+|.... ....+.. -+|.|.+.. .....+..+-.+ ..
T Consensus 30 ~g~l~v~~~~---~~~v~~~~~~-~~~~~~~~~~~~~---------~~~~i~~~~~g~l~v~~--~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 30 DGKVWFTQHK---ANKISSLDQS-GRIKEFEVPTPDA---------KVMCLIVSSLGDIWFTE--NGANKIGKLSKK-GG 93 (300)
T ss_dssp TSCEEEEETT---TTEEEEECTT-SCEEEEECSSTTC---------CEEEEEECTTSCEEEEE--TTTTEEEEECTT-SC
T ss_pred CCCEEEEcCC---CCeEEEECCC-CceEEEECCCCCC---------cceeEEECCCCCEEEEe--cCCCeEEEECCC-CC
Confidence 4887765532 2489999998 7777776664321 1223333 457777754 233444443332 33
Q ss_pred eeEEEEecCCCcceeeeEEeeCCEEEEEEc-CCeEEEEeCCCCeEEEEEE
Q 036281 301 WIKHLTFGPFIETYQPLGFWRKDEFLLESS-DKRVILYDSRYHEMRDLGI 349 (371)
Q Consensus 301 W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-~~~l~~yd~~~~~~~~v~~ 349 (371)
+. .+.+........-+.+..+|.+++... ...++.||++ +++..+..
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~ 141 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL 141 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred eE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC
Confidence 32 222221111122344456788888764 5689999998 66665544
No 43
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=78.49 E-value=29 Score=29.13 Aligned_cols=109 Identities=13% Similarity=0.141 Sum_probs=62.4
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF 300 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~ 300 (371)
+|.+|..... ...|..+|. +.++..+..|.... ....+.. -+|.|.+.. .....+.+|-. +..
T Consensus 151 ~g~l~v~~~~---~~~i~~~~~-~g~~~~~~~~~~~~---------~~~~i~~~~~g~l~v~~--~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 151 DNALWFTENQ---NNAIGRITE-SGDITEFKIPTPAS---------GPVGITKGNDDALWFVE--IIGNKIGRITT-SGE 214 (299)
T ss_dssp TSCEEEEETT---TTEEEEECT-TCCEEEEECSSTTC---------CEEEEEECTTSSEEEEE--TTTTEEEEECT-TCC
T ss_pred CCCEEEEeCC---CCEEEEEcC-CCcEEEeeCCCCCC---------cceeEEECCCCCEEEEc--cCCceEEEECC-CCc
Confidence 4777665432 347999999 77777665554322 1223443 467877655 23455655555 323
Q ss_pred eeEEEEecCCCcceee--eEEeeCCEEEEEE-cCCeEEEEeCCCCeEEEEEEe
Q 036281 301 WIKHLTFGPFIETYQP--LGFWRKDEFLLES-SDKRVILYDSRYHEMRDLGIT 350 (371)
Q Consensus 301 W~~~~~i~~~~~~~~~--~~~~~~~~il~~~-~~~~l~~yd~~~~~~~~v~~~ 350 (371)
.. .+.+ +. ....| +.+..+|.+++.. ..+.+..||+ +++++.+.+.
T Consensus 215 ~~-~~~~-~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~ 263 (299)
T 2z2n_A 215 IT-EFKI-PT-PNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQ 263 (299)
T ss_dssp EE-EEEC-SS-TTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECS
T ss_pred EE-EEEC-CC-CCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCC
Confidence 22 1222 21 12333 4555678888876 4678999999 5677666544
No 44
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=78.37 E-value=35 Score=30.08 Aligned_cols=181 Identities=10% Similarity=0.031 Sum_probs=88.9
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeecCcc
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDLKGF 205 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~~~~ 205 (371)
.|||..+++....-.... . ......+.+.|..+.+ ++... . .-.+.+++..++..+.....
T Consensus 99 ~iwd~~~~~~~~~~~~~~----h---~~~v~~~~~~~~~~~~-l~s~~---~--------d~~i~iwd~~~~~~~~~~~~ 159 (383)
T 3ei3_B 99 ILWDYDVQNKTSFIQGMG----P---GDAITGMKFNQFNTNQ-LFVSS---I--------RGATTLRDFSGSVIQVFAKT 159 (383)
T ss_dssp EEEETTSTTCEEEECCCS----T---TCBEEEEEEETTEEEE-EEEEE---T--------TTEEEEEETTSCEEEEEECC
T ss_pred EEEeCCCcccceeeecCC----c---CCceeEEEeCCCCCCE-EEEEe---C--------CCEEEEEECCCCceEEEecc
Confidence 899998876554322110 0 1122455555532222 22221 1 35678888887655544321
Q ss_pred ccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCe-EEEEe
Q 036281 206 EMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDC-LSLLY 283 (371)
Q Consensus 206 ~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~-L~l~~ 283 (371)
. ...... ..-...-+|.+-..+.. ...|..+|+..+....+..... ....+.. -+|. +.+..
T Consensus 160 ~-~~~~~v-~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~h~~-----------~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 160 D-SWDYWY-CCVDVSVSRQMLATGDS---TGRLLLLGLDGHEIFKEKLHKA-----------KVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp C-CSSCCE-EEEEEETTTTEEEEEET---TSEEEEEETTSCEEEEEECSSS-----------CEEEEEECSSCTTEEEEE
T ss_pred C-CCCCCe-EEEEECCCCCEEEEECC---CCCEEEEECCCCEEEEeccCCC-----------cEEEEEECCCCCCEEEEE
Confidence 0 000000 00111223443333322 3478889987665555532111 1122322 3444 44444
Q ss_pred cCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEee-CCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 284 SDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWR-KDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 284 ~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
.....+.||-+.. ..-.....+. ...-..-+.+.+ ++..++. ..++.+.+||+++++.
T Consensus 224 --~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 224 --SVDATVKLWDLRNIKDKNSYIAEMP-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp --ETTSEEEEEEGGGCCSTTCEEEEEE-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTS
T ss_pred --eCCCEEEEEeCCCCCcccceEEEec-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 3567899999986 1122333332 222334455666 7766555 5678999999987653
No 45
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.27 E-value=25 Score=30.43 Aligned_cols=114 Identities=10% Similarity=0.005 Sum_probs=60.6
Q ss_pred ECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCC--CCCEEEEEEee
Q 036281 221 LNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDK--FAHSFELWIMK 297 (371)
Q Consensus 221 ~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~--~~~~~~iW~L~ 297 (371)
-+|.+||..... ..|..+|..+.++..+..+.. . ....+.. -+|+|.+..... ....+.+|-.+
T Consensus 54 ~~g~l~~~~~~~---~~i~~~d~~~~~~~~~~~~~~--~--------~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 54 RQGQLFLLDVFE---GNIFKINPETKEIKRPFVSHK--A--------NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp TTSCEEEEETTT---CEEEEECTTTCCEEEEEECSS--S--------SEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCCCEEEEECCC---CEEEEEeCCCCcEEEEeeCCC--C--------CcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 368888766432 479999999888766532111 1 1223443 467877755311 11344444333
Q ss_pred CCceeEEEEecCCCcceeeeEEeeCCEEEEEEc-------CCeEEEEeCCCCeEEEE
Q 036281 298 GGFWIKHLTFGPFIETYQPLGFWRKDEFLLESS-------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 298 ~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~-------~~~l~~yd~~~~~~~~v 347 (371)
...-.....-........-+.+..+|.+++... ...++.+|.++++++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 221111111001111223345566888888754 25799999988776655
No 46
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=77.30 E-value=32 Score=29.06 Aligned_cols=113 Identities=12% Similarity=0.062 Sum_probs=69.5
Q ss_pred EEECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEee
Q 036281 219 VYLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMK 297 (371)
Q Consensus 219 v~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~ 297 (371)
.+.+|.+|--+... ....|..+|+.+.+. ..+++|.... ..-+...+++|+.... ... .+|+.+
T Consensus 27 ~~~~~~LyestG~~-g~S~v~~vD~~tgkv~~~~~l~~~~f----------geGi~~~~~~ly~ltw--~~~--~v~v~D 91 (243)
T 3mbr_X 27 FYLRGHLYESTGET-GRSSVRKVDLETGRILQRAEVPPPYF----------GAGIVAWRDRLIQLTW--RNH--EGFVYD 91 (243)
T ss_dssp EEETTEEEEEECCT-TSCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES--SSS--EEEEEE
T ss_pred EEECCEEEEECCCC-CCceEEEEECCCCCEEEEEeCCCCcc----------eeEEEEeCCEEEEEEe--eCC--EEEEEE
Confidence 34556666544332 345899999998766 5677776432 2235556889888763 344 455555
Q ss_pred CCceeEEEEecCCCcceeeeEEeeCC-EEEEEEcCCeEEEEeCCCCeE-EEEEE
Q 036281 298 GGFWIKHLTFGPFIETYQPLGFWRKD-EFLLESSDKRVILYDSRYHEM-RDLGI 349 (371)
Q Consensus 298 ~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~~~~~~l~~yd~~~~~~-~~v~~ 349 (371)
-..-.++-+|.... .+.++..++ .+++...+..+..+|++|.+. +.+.+
T Consensus 92 ~~tl~~~~ti~~~~---~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 92 LATLTPRARFRYPG---EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTTTEEEEEEECSS---CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CCcCcEEEEEeCCC---CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 44445555554321 334555544 566666678999999999764 55554
No 47
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=77.04 E-value=33 Score=29.07 Aligned_cols=194 Identities=8% Similarity=-0.035 Sum_probs=100.3
Q ss_pred eEEEee-cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEE
Q 036281 115 IFCLLK-SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYN 193 (371)
Q Consensus 115 Ll~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~ 193 (371)
|+.... ...+ +++||.++ ...+..+.. ...++.+++... ++... . ....+.+|+
T Consensus 42 l~~~~~~~~~i-~~~~~~~~-~~~~~~~~~----------~~~~l~~~~dg~---l~v~~--~--------~~~~i~~~d 96 (296)
T 3e5z_A 42 VIFSDVRQNRT-WAWSDDGQ-LSPEMHPSH----------HQNGHCLNKQGH---LIACS--H--------GLRRLERQR 96 (296)
T ss_dssp EEEEEGGGTEE-EEEETTSC-EEEEESSCS----------SEEEEEECTTCC---EEEEE--T--------TTTEEEEEC
T ss_pred EEEEeCCCCEE-EEEECCCC-eEEEECCCC----------CcceeeECCCCc---EEEEe--c--------CCCeEEEEc
Confidence 344433 3455 99999988 554433221 125677776432 22221 0 134678888
Q ss_pred cCCCceeecCccccccceeccccceEEE--CceEEEEEec--------------CCCCcEEEEEECCCceEEEeCCCCCC
Q 036281 194 FSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCR--------------PDYSKAILAFSMSNEVFQEIKGPSVP 257 (371)
Q Consensus 194 ~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~--------------~~~~~~Il~fD~~~e~~~~i~~P~~~ 257 (371)
..++..+.........+ ......+.+ +|.+|.-... ......|..+|.. .++..+.-. .
T Consensus 97 ~~~g~~~~~~~~~~~~~--~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~ 171 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKK--LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD--R 171 (296)
T ss_dssp STTCCEEEEECEETTEE--CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC--C
T ss_pred CCCCcEEEEeeccCCCC--CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC--C
Confidence 87777665432100101 101122333 5777653210 0012378889887 555544211 1
Q ss_pred CCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeC-Cce-eEEEEecCCCcceeeeEEeeCCEEEEEEcCCeE
Q 036281 258 QTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKG-GFW-IKHLTFGPFIETYQPLGFWRKDEFLLESSDKRV 334 (371)
Q Consensus 258 ~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~-~~W-~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l 334 (371)
. ....+.. -+|++.+.. .....+.+|-++. ... .....+........-+++..+|.+++.. .+.+
T Consensus 172 ~---------~~~gi~~s~dg~~lv~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v 239 (296)
T 3e5z_A 172 V---------KPNGLAFLPSGNLLVSD--TGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGV 239 (296)
T ss_dssp S---------SEEEEEECTTSCEEEEE--TTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEE
T ss_pred C---------CCccEEECCCCCEEEEe--CCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeE
Confidence 1 1112332 356655333 4557788888863 444 2222222111122336667788988887 7889
Q ss_pred EEEeCCCCeEEEEEEe
Q 036281 335 ILYDSRYHEMRDLGIT 350 (371)
Q Consensus 335 ~~yd~~~~~~~~v~~~ 350 (371)
..||++.+.++.+...
T Consensus 240 ~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 240 HVLTPDGDELGRVLTP 255 (296)
T ss_dssp EEECTTSCEEEEEECS
T ss_pred EEECCCCCEEEEEECC
Confidence 9999998777777654
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=76.93 E-value=22 Score=31.08 Aligned_cols=97 Identities=8% Similarity=0.062 Sum_probs=56.8
Q ss_pred cEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|..+|+.+.++..+. ++.... ....+.. -+|.+.+.. .....+.+|-++...+.....+......
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 98 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNG---------QVTGVDWAPDSNRIVTC--GTDRNAYVWTLKGRTWKPTLVILRINRA 98 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSS---------CEEEEEEETTTTEEEEE--ETTSCEEEEEEETTEEEEEEECCCCSSC
T ss_pred CEEEEEeCCCCcEEeeeeecCCCC---------cccEEEEeCCCCEEEEE--cCCCeEEEEECCCCeeeeeEEeecCCCc
Confidence 46888888887643332 221111 1222332 356655544 2567899999987666666654444333
Q ss_pred eeeeEEeeCCEEEEE-EcCCeEEEEeCCCCe
Q 036281 314 YQPLGFWRKDEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 314 ~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 343 (371)
..-+.+.+++..++. ..++.+.+||+++++
T Consensus 99 v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp EEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred eeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 444555566665544 567788899988765
No 49
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=76.73 E-value=38 Score=29.62 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=64.3
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeC----CCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCC-CCEEEEEE
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIK----GPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKF-AHSFELWI 295 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~----~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~-~~~~~iW~ 295 (371)
+|..-+.+... ...|..||+.+.++..+. .|.... ....+.. -+|+..++.. .. ...+.||.
T Consensus 221 dg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~~~~---------~~~~i~~spdg~~l~v~~-~~~~~~i~v~~ 288 (361)
T 3scy_A 221 DGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTVNAQ---------GSGDIHLSPDGKYLYASN-RLKADGVAIFK 288 (361)
T ss_dssp TSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSSCCC---------CEEEEEECTTSSEEEEEE-CSSSCEEEEEE
T ss_pred CCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCCCCC---------CcccEEECCCCCEEEEEC-CCCCCEEEEEE
Confidence 57543444322 347888888877665442 122111 1123332 4677544443 34 67899999
Q ss_pred eeC--CceeEEEEecCCCcceeeeEEeeCCEEEEE-E-cCCeEEE--EeCCCCeEEEEE
Q 036281 296 MKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLE-S-SDKRVIL--YDSRYHEMRDLG 348 (371)
Q Consensus 296 L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~~~l~~--yd~~~~~~~~v~ 348 (371)
++. ..+.....+.. ....+-+.+.++|+.++. . .++.+.+ +|.++++++.+.
T Consensus 289 ~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 289 VDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp ECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 973 56666655543 212334667778875544 4 3455655 688888887763
No 50
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=74.76 E-value=40 Score=28.86 Aligned_cols=113 Identities=13% Similarity=0.062 Sum_probs=67.0
Q ss_pred EEECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEee
Q 036281 219 VYLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMK 297 (371)
Q Consensus 219 v~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~ 297 (371)
.+.+|.||--+... ....|..+|+.+.+. ..+++|.... ..-+...+++|++... ... .+|+.+
T Consensus 49 ~~~~~~LyestG~~-g~S~v~~vD~~Tgkv~~~~~l~~~~F----------geGit~~g~~ly~ltw--~~~--~v~v~D 113 (262)
T 3nol_A 49 FYRNGYFYESTGLN-GRSSIRKVDIESGKTLQQIELGKRYF----------GEGISDWKDKIVGLTW--KNG--LGFVWN 113 (262)
T ss_dssp EEETTEEEEEEEET-TEEEEEEECTTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEES--SSS--EEEEEE
T ss_pred EEECCEEEEECCCC-CCceEEEEECCCCcEEEEEecCCccc----------eeEEEEeCCEEEEEEe--eCC--EEEEEE
Confidence 34477777655432 245799999998765 5566664321 2235556888888763 344 455555
Q ss_pred CCceeEEEEecCCCcceeeeEEeeCCE-EEEEEcCCeEEEEeCCCCe-EEEEEE
Q 036281 298 GGFWIKHLTFGPFIETYQPLGFWRKDE-FLLESSDKRVILYDSRYHE-MRDLGI 349 (371)
Q Consensus 298 ~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~-~~~v~~ 349 (371)
-.+-..+-+|.... .+.++..+++ +++...+..+..+|++|.+ .+.+.+
T Consensus 114 ~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 114 IRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred CccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 43444455554321 2334444554 5555557789999999865 455555
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=72.95 E-value=23 Score=30.96 Aligned_cols=70 Identities=7% Similarity=0.172 Sum_probs=48.3
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
+|++.+.. .....+.||-++...|.....+..+..-..-+.+.+++++++. ..++.+.+||++++++...
T Consensus 19 ~~~~l~~~--~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 19 DRTQIAIC--PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp TSSEEEEE--CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEE--eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee
Confidence 56655554 3578999999988667777776554434445566667765554 5678899999999875544
No 52
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=72.19 E-value=33 Score=30.98 Aligned_cols=86 Identities=16% Similarity=0.218 Sum_probs=52.8
Q ss_pred EEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEE
Q 036281 248 FQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEF 325 (371)
Q Consensus 248 ~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~i 325 (371)
++.+..|....+ .+..++. .++.|++.. +.++.||-.+...-.+.+..........-+++.++|.+
T Consensus 94 ~~~l~ap~~~~d--------~y~~~l~wS~~n~lAvgl----d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~ 161 (420)
T 4gga_A 94 DRILDAPEIRND--------YYLNLVDWSSGNVLAVAL----DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNY 161 (420)
T ss_dssp SEEEECTTCCCC--------TTCBCEEECTTSEEEEEE----TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSE
T ss_pred ceEEECCCCccc--------ccceeEEECCCCEEEEEe----CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCE
Confidence 344556665544 3444544 345555432 47899998876444555554433334455666778776
Q ss_pred EEE-EcCCeEEEEeCCCCeEE
Q 036281 326 LLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 326 l~~-~~~~~l~~yd~~~~~~~ 345 (371)
++. ..++.+.+||+++++..
T Consensus 162 lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 162 LAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp EEEEETTSCEEEEETTTTEEE
T ss_pred EEEEECCCeEEEEEcCCCcEE
Confidence 655 56788999999988753
No 53
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=70.91 E-value=43 Score=27.62 Aligned_cols=200 Identities=12% Similarity=-0.041 Sum_probs=93.0
Q ss_pred eecce-EEEeecCCceEEEeccc-cccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcce
Q 036281 111 PYDGI-FCLLKSHTLINLWNVSL-NEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSH 188 (371)
Q Consensus 111 s~~GL-l~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (371)
+-+|- |.......+ +++|..+ ++...+...... .....+.+.|.. .+ ++.... .. .....
T Consensus 50 spdg~~l~~~~~~~i-~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~spdg-~~-l~~~~~-~~------~~~~~ 111 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLL-YRLSLAGDPSPEKVDTGFAT--------ICNNDHGISPDG-AL-YAISDK-VE------FGKSA 111 (297)
T ss_dssp CTTSSEEEEEETTEE-EEEESSSCCSCEECCCTTCC--------CBCSCCEECTTS-SE-EEEEEC-TT------TSSCE
T ss_pred CCCCCEEEEEcCCeE-EEEeCCCCCCceEecccccc--------ccccceEECCCC-CE-EEEEEe-CC------CCcce
Confidence 33443 333334455 9999999 877665533310 011233444432 22 222211 01 11456
Q ss_pred EEEEEcCCCceeecCccccccceeccccceEEECce-EEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCC
Q 036281 189 VAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGY-CYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVK 267 (371)
Q Consensus 189 ~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 267 (371)
+.+++..++.-+.+.... . ... -...-+|. +++....+ ....|..+|+.+.+...+.... .
T Consensus 112 l~~~~~~~~~~~~~~~~~-~-~~~----~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~--~--------- 173 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKNL-P-SYW----HGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGVETRLTHGE--G--------- 173 (297)
T ss_dssp EEEEETTCCCCEECCSSS-S-EEE----EEECTTSSEEEEEEEET-TEEEEEEEETTTCCEEECCCSS--S---------
T ss_pred EEEEECCCCceEEeecCC-C-ccc----eEECCCCCEEEEEECCC-CceEEEEEECCCCcceEcccCC--C---------
Confidence 677777766655443221 1 110 01112343 33333222 2345667777766555442211 1
Q ss_pred CcceEE-EeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEE-EEEcC-----------CeE
Q 036281 268 TPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFL-LESSD-----------KRV 334 (371)
Q Consensus 268 ~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~~-----------~~l 334 (371)
....+. .-+|+..++.. .....+.||.++.. -.....+.........+.+.++|+.+ +...+ ..+
T Consensus 174 ~~~~~~~s~dg~~l~~~~-~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNS-SRTGQMQIWRVRVD-GSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp CEEEEEECTTSSEEEEEE-CTTSSCEEEEEETT-SSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred ccccceECCCCCEEEEEe-cCCCCccEEEECCC-CCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 112222 23566444332 23467899999731 11122332222223334555677644 44322 469
Q ss_pred EEEeCCCCeEEEEE
Q 036281 335 ILYDSRYHEMRDLG 348 (371)
Q Consensus 335 ~~yd~~~~~~~~v~ 348 (371)
++||+++++.+.+.
T Consensus 252 ~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 252 QLMDMDGGNVETLF 265 (297)
T ss_dssp EEEETTSCSCEEEE
T ss_pred EEEecCCCCceeee
Confidence 99999998876553
No 54
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=70.39 E-value=84 Score=30.76 Aligned_cols=115 Identities=9% Similarity=0.115 Sum_probs=62.0
Q ss_pred ECceEEEEEecCCCCcEEEEEECCCc---eEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEee
Q 036281 221 LNGYCYWVVCRPDYSKAILAFSMSNE---VFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMK 297 (371)
Q Consensus 221 ~~G~lywl~~~~~~~~~Il~fD~~~e---~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~ 297 (371)
-++.+|..+..+.....|+..|+.+. .|+.+ .|..... . .....++.|.+.........+.+|-++
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~---------~-~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL-IPERQQV---------L-TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE-ECCCSSC---------E-EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE-ecCCCCE---------E-EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 35788888765434578999999873 35654 2332211 1 334456777775532333445555443
Q ss_pred CCceeEEEEecCCCcceeeeEEe-eCCEEEEEEcC----CeEEEEeCCCCeEEEEE
Q 036281 298 GGFWIKHLTFGPFIETYQPLGFW-RKDEFLLESSD----KRVILYDSRYHEMRDLG 348 (371)
Q Consensus 298 ~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~~~----~~l~~yd~~~~~~~~v~ 348 (371)
..+.+...+ +.......+... +++++++...+ ..++.||+++++.+.+.
T Consensus 359 -g~~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 -GKRVREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp -SCEEEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred -CCeeEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 333332222 221122222222 24456666433 68999999998877664
No 55
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=68.94 E-value=60 Score=28.50 Aligned_cols=99 Identities=17% Similarity=0.047 Sum_probs=53.5
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCc
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIE 312 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~ 312 (371)
..|..+|+++.+- ..+..+.... ....+.. .++.+.+.. .....+.||-++. ......+..+..
T Consensus 192 ~~v~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~~p~~~~~l~sg--~~dg~v~~wd~~~--~~~~~~~~~h~~ 258 (344)
T 4gqb_B 192 NRILLWDTRCPKPASQIGCSAPGY---------LPTSLAWHPQQSEVFVFG--DENGTVSLVDTKS--TSCVLSSAVHSQ 258 (344)
T ss_dssp SCEEEEETTSSSCEEECC----CC---------CEEEEEECSSCTTEEEEE--ETTSEEEEEESCC----CCEEEECCSS
T ss_pred cccccccccccceeeeeecceeec---------cceeeeecCCCCcceEEe--ccCCcEEEEECCC--CcEEEEEcCCCC
Confidence 4678889887653 3333222111 1122322 245555544 3567899998765 222333333332
Q ss_pred ceeeeEEeeCC-EEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 313 TYQPLGFWRKD-EFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 313 ~~~~~~~~~~~-~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
-..-+++.+++ .+++. ..++.+.+||.+++++..+
T Consensus 259 ~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~ 295 (344)
T 4gqb_B 259 CVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS 295 (344)
T ss_dssp CEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE
Confidence 33445566666 45554 5678899999999986543
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=67.43 E-value=72 Score=28.83 Aligned_cols=58 Identities=9% Similarity=0.056 Sum_probs=33.0
Q ss_pred CCCEEEEEEeeCCceeEEEEec-CCC-cceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEE
Q 036281 287 FAHSFELWIMKGGFWIKHLTFG-PFI-ETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~~i~-~~~-~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~ 346 (371)
....+.||-..... ....+. +.. .+.....+.++|.+|....++.+.+||+++++.++
T Consensus 376 ~~~~i~iwd~~~g~--~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 376 ELRTIDVFDGNSGK--MMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp CCCCEEEECSSSCC--EEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC------
T ss_pred CCCEEEEEECCCCc--EEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 44578999776522 223332 332 23333456678888887778899999999987653
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=66.48 E-value=68 Score=28.22 Aligned_cols=92 Identities=7% Similarity=-0.079 Sum_probs=49.0
Q ss_pred cEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeC-C----c--------
Q 036281 236 KAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKG-G----F-------- 300 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~-~----~-------- 300 (371)
..|..+|+.+.+... +..... ....+.. .+|.+.+.. .....+.||-++. . .
T Consensus 310 ~~i~i~d~~~~~~~~~~~~~~~-----------~i~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 376 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLALSIVDGV-----------PIFAGRISQDGQKYAVA--FMDGQVNVYDLKKLNSKSRSLYGNRDGI 376 (425)
T ss_dssp SEEEEEETTTTEEEEEEECTTC-----------CEEEEEECTTSSEEEEE--ETTSCEEEEECHHHHC------------
T ss_pred CcEEEEECCCCcEeEecccCCc-----------cEEEEEEcCCCCEEEEE--ECCCeEEEEECCCCccceeeeecccccc
Confidence 478999998765432 221111 1112222 245554444 2456788888875 1 0
Q ss_pred -----eeEEEEecCCCc--ceeeeEEeeCCEEEE-EEcCCeEEEEeCC
Q 036281 301 -----WIKHLTFGPFIE--TYQPLGFWRKDEFLL-ESSDKRVILYDSR 340 (371)
Q Consensus 301 -----W~~~~~i~~~~~--~~~~~~~~~~~~il~-~~~~~~l~~yd~~ 340 (371)
+.....+..... ...-+.+..++..++ ...++.+.+||++
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 377 LNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp --CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 113334433321 334455566776554 4667789999986
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=65.99 E-value=61 Score=27.45 Aligned_cols=69 Identities=12% Similarity=0.153 Sum_probs=41.6
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEE-EEcCCeEEEEeCCCCeEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLL-ESSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~~~~l~~yd~~~~~~~~ 346 (371)
+|++.+.. .....+.+|-++.........+.....-..-+.+.+++..++ ...++.+.+||+++++...
T Consensus 108 ~~~~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVG--GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEE--ESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEE--cCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 45544444 256789999988744444444433332234455556666544 4567889999999887543
No 59
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=65.23 E-value=81 Score=28.62 Aligned_cols=127 Identities=13% Similarity=0.028 Sum_probs=70.2
Q ss_pred ECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCC-CCC--CcccccCCCcceEEE--eCCeEEEEecC-----CCCCE
Q 036281 221 LNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSV-PQT--TTYYQSVKTPWMLGT--YDDCLSLLYSD-----KFAHS 290 (371)
Q Consensus 221 ~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~-~~~--~~~~~~~~~~~~L~~--~~g~L~l~~~~-----~~~~~ 290 (371)
.+|.++|.+..+ .|.++|+.++.-..+. |.. ... ...+|.+.....+.. -+++|++.... .....
T Consensus 236 ~dG~~~~vs~~g----~V~v~d~~~~~~~v~~-~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 236 KAGRLVWPTYTG----KIHQIDLSSGDAKFLP-AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp TTTEEEEEBTTS----EEEEEECTTSSCEECC-CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred CCCcEEEEeCCC----EEEEEECCCCcceeec-ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 378999987765 7999999887543321 100 000 000111111111222 35677774321 12345
Q ss_pred EEEEEeeCCceeEEEEecCCCcceeeeEEeeCCE-EEEE-E-cCCeEEEEeCCCCeE-EEEEEecce
Q 036281 291 FELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDE-FLLE-S-SDKRVILYDSRYHEM-RDLGITGLW 353 (371)
Q Consensus 291 ~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~-~-~~~~l~~yd~~~~~~-~~v~~~~~~ 353 (371)
=+||+++-.++..+.+|..-. -..-+.+..|++ .|+. . .++.+.+||.++++. +.+...+.+
T Consensus 311 ~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred CEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC
Confidence 689999986777777764221 122366677775 5544 3 367899999998874 445444443
No 60
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.81 E-value=82 Score=28.54 Aligned_cols=110 Identities=10% Similarity=0.080 Sum_probs=61.3
Q ss_pred ECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEEeCCe-EEEEecCCCCCEEEEEEeeC-
Q 036281 221 LNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDC-LSLLYSDKFAHSFELWIMKG- 298 (371)
Q Consensus 221 ~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~-L~l~~~~~~~~~~~iW~L~~- 298 (371)
-+|.+||.... ...|..+|+.+.+...+.... .. ... ...-+|. |..... .... .||.++.
T Consensus 140 ~~g~lyv~d~~---~~~I~~id~~~g~~~~~~~~~--~~--------~~i-a~~~~g~~l~~~d~-~~~~--~I~~~d~~ 202 (409)
T 3hrp_A 140 GNNTVLAYQRD---DPRVRLISVDDNKVTTVHPGF--KG--------GKP-AVTKDKQRVYSIGW-EGTH--TVYVYMKA 202 (409)
T ss_dssp STTEEEEEETT---TTEEEEEETTTTEEEEEEETC--CB--------CBC-EECTTSSEEEEEBS-STTC--EEEEEEGG
T ss_pred CCCCEEEEecC---CCcEEEEECCCCEEEEeeccC--CC--------Cce-eEecCCCcEEEEec-CCCc--eEEEEEcC
Confidence 36899998764 358999999987776653221 11 111 1223444 333332 1222 5666665
Q ss_pred CceeE-EE-EecC-CCcceeeeEEee-CCEEEEEEcCCeEEEEeCCCCeEEEE
Q 036281 299 GFWIK-HL-TFGP-FIETYQPLGFWR-KDEFLLESSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 299 ~~W~~-~~-~i~~-~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~~~~~~~v 347 (371)
..|.. .. .+.+ ......-+++.. +|.|++....+.++.||++++....+
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 34442 11 1112 111223466666 77888865667899999998876554
No 61
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=64.71 E-value=70 Score=27.73 Aligned_cols=192 Identities=10% Similarity=-0.010 Sum_probs=95.5
Q ss_pred ecceEEEee-c-CCceEEEecccccc-ccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcce
Q 036281 112 YDGIFCLLK-S-HTLINLWNVSLNEY-RGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSH 188 (371)
Q Consensus 112 ~~GLl~~~~-~-~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (371)
.++.+.+.. . ..+ .|+|+.|++. ..+|... .. .++.+++. . +++.... ..-.
T Consensus 52 ~~~~lyv~~~~~~~v-~viD~~t~~~~~~i~~~~---------~p--~~i~~~~~--g-~lyv~~~----------~~~~ 106 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVI-FAIDINTFKEVGRITGFT---------SP--RYIHFLSD--E-KAYVTQI----------WDYR 106 (328)
T ss_dssp ETTEEEEEEGGGTEE-EEEETTTCCEEEEEECCS---------SE--EEEEEEET--T-EEEEEEB----------SCSE
T ss_pred ECCEEEEEEcCCCEE-EEEECcccEEEEEcCCCC---------CC--cEEEEeCC--C-eEEEEEC----------CCCe
Confidence 455554444 2 445 9999999876 4564322 12 44555433 2 4444321 1356
Q ss_pred EEEEEcCCCceee-cCccccccc-eeccccceEEECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCccccc
Q 036281 189 VAVYNFSTNSWRD-LKGFEMRFD-YMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 189 ~~vy~~~~~~Wr~-~~~~~~~~~-~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~ 265 (371)
+.+++..++.-.. ++ .. ... .......-+.-+|.+|...... ...|..+|+.+.+. ..++.......
T Consensus 107 v~~iD~~t~~~~~~i~-~g-~~~~~~~~p~~i~~~~~~lyv~~~~~--~~~v~viD~~t~~~~~~i~~g~~p~~------ 176 (328)
T 3dsm_A 107 IFIINPKTYEITGYIE-CP-DMDMESGSTEQMVQYGKYVYVNCWSY--QNRILKIDTETDKVVDELTIGIQPTS------ 176 (328)
T ss_dssp EEEEETTTTEEEEEEE-CT-TCCTTTCBCCCEEEETTEEEEEECTT--CCEEEEEETTTTEEEEEEECSSCBCC------
T ss_pred EEEEECCCCeEEEEEE-cC-CccccCCCcceEEEECCEEEEEcCCC--CCEEEEEECCCCeEEEEEEcCCCccc------
Confidence 7888888765321 21 10 100 0000112233567777665421 34899999998765 34443221111
Q ss_pred CCCcceEEEeCCeEEEEecCCC--------CCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEE
Q 036281 266 VKTPWMLGTYDDCLSLLYSDKF--------AHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILY 337 (371)
Q Consensus 266 ~~~~~~L~~~~g~L~l~~~~~~--------~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~y 337 (371)
....-+|++.+...... ...+.++-.+...-.+...+.. .....-+++..+++.++.... .++.+
T Consensus 177 -----i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~~lyv~~~-~v~~~ 249 (328)
T 3dsm_A 177 -----LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRDTLYWINN-DIWRM 249 (328)
T ss_dssp -----CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT-TCCCEEEEECTTSCEEEEESS-SEEEE
T ss_pred -----eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC-CCCceeEEEecCCCEEEEEcc-EEEEE
Confidence 11234688777653110 1344444433233333333211 112334566666665555444 79999
Q ss_pred eCCCCeEE
Q 036281 338 DSRYHEMR 345 (371)
Q Consensus 338 d~~~~~~~ 345 (371)
|++++++.
T Consensus 250 d~~t~~~~ 257 (328)
T 3dsm_A 250 PVEADRVP 257 (328)
T ss_dssp ETTCSSCC
T ss_pred ECCCCcee
Confidence 99988763
No 62
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=63.93 E-value=51 Score=28.37 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=43.2
Q ss_pred CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 277 DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
|.+.+.. .....+.||-++.........+..+..-..-+.+.+++..++. ..++.+.+||+++++...+
T Consensus 54 g~~l~~~--~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAG--SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEE--ETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEE--CCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 4555544 3567899999986233332333333323344555667765554 5688899999999987664
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=63.80 E-value=65 Score=27.04 Aligned_cols=59 Identities=19% Similarity=0.272 Sum_probs=39.0
Q ss_pred CCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 288 AHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 288 ~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
+.++.||-++...-.+......+.....-+.+.++++.++. ..++.+.+||.++++...
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE
Confidence 57899998876444444443333323445666677776665 567889999999987543
No 64
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=63.52 E-value=84 Score=28.20 Aligned_cols=187 Identities=7% Similarity=-0.003 Sum_probs=92.1
Q ss_pred cceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEE
Q 036281 113 DGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVY 192 (371)
Q Consensus 113 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (371)
.+.|++.....+ ...++.+++...+-... ....++.+|+..+. |+..- . ..-.+..+
T Consensus 87 ~~~l~~~~~~~I-~~i~~~~~~~~~~~~~~----------~~~~gl~~d~~~~~--ly~~D---~-------~~~~I~r~ 143 (386)
T 3v65_B 87 EPVLLFANRIDI-RQVLPHRSEYTLLLNNL----------ENAIALDFHHRREL--VFWSD---V-------TLDRILRA 143 (386)
T ss_dssp CCEEEEECBSCE-EEECTTSCCCEEEECSC----------SCEEEEEEETTTTE--EEEEE---T-------TTTEEEEE
T ss_pred cceeEeecCccc-eeeccCCCcEEEEecCC----------CccEEEEEecCCCe--EEEEe---C-------CCCcEEEE
Confidence 456666666555 77777665544332111 12367888765543 22221 1 13456667
Q ss_pred EcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCc
Q 036281 193 NFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTP 269 (371)
Q Consensus 193 ~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~ 269 (371)
+..++..+.+... .+. ...++.+ +|.+||..... ..|..+|+....-..+. ..... ..
T Consensus 144 ~~~g~~~~~~~~~--~~~----~p~glavd~~~g~lY~~d~~~---~~I~~~~~dg~~~~~l~-~~~l~---------~P 204 (386)
T 3v65_B 144 NLNGSNVEEVVST--GLE----SPGGLAVDWVHDKLYWTDSGT---SRIEVANLDGAHRKVLL-WQSLE---------KP 204 (386)
T ss_dssp ETTSCCEEEEECS--SCS----CCCCEEEETTTTEEEEEETTT---TEEEECBTTSCSCEEEE-CSSCS---------CE
T ss_pred ecCCCCcEEEEeC--CCC----CccEEEEEeCCCeEEEEcCCC---CeEEEEeCCCCceEEee-cCCCC---------CC
Confidence 7666554433211 111 1123333 58999987653 57899998765433331 11111 11
Q ss_pred ceEEE--eCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceee--eEEe-eCCEEEEEE-cCCeEEEEeCCCC
Q 036281 270 WMLGT--YDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQP--LGFW-RKDEFLLES-SDKRVILYDSRYH 342 (371)
Q Consensus 270 ~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~--~~~~-~~~~il~~~-~~~~l~~yd~~~~ 342 (371)
..++. .+|.|+.... ..... |+...- .+-.+.. +. ..+..| +++. .++.|++.. ....+..+|+...
T Consensus 205 ~giavdp~~g~ly~td~-~~~~~--I~r~~~dG~~~~~~-~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDW-GNTPR--IEASSMDGSGRRII-AD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEEEETTTTEEEEEEC-SSSCE--EEEEETTSCSCEEE-EC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred cEEEEEcCCCeEEEecc-CCCCE--EEEEeCCCCCcEEE-EE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 22333 3677766542 11233 444443 2211111 11 123344 4555 356777764 3567888988765
Q ss_pred eEEEE
Q 036281 343 EMRDL 347 (371)
Q Consensus 343 ~~~~v 347 (371)
..+.+
T Consensus 279 ~~~~~ 283 (386)
T 3v65_B 279 HRKAV 283 (386)
T ss_dssp SCEEE
T ss_pred eeEEE
Confidence 54444
No 65
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=63.38 E-value=85 Score=30.05 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=62.1
Q ss_pred cceEEECceEEEEEe-cCCCCcEEEEEEC-CC--ceEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEE
Q 036281 216 IYNVYLNGYCYWVVC-RPDYSKAILAFSM-SN--EVFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSF 291 (371)
Q Consensus 216 ~~~v~~~G~lywl~~-~~~~~~~Il~fD~-~~--e~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~ 291 (371)
..++..+|.+|.... .. .|.++|. .+ +.|+. +++.................+...+|+|.+... ..
T Consensus 56 ~~P~v~~g~vyv~~~~~~----~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~---dg-- 125 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN----NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA---NG-- 125 (571)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---TS--
T ss_pred cccEEECCEEEEEeCCCC----EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeC---CC--
Confidence 467889999998876 44 7999998 65 45654 222211000000000001123445777666431 22
Q ss_pred EEEEeeC----CceeEEEEecCC-Ccc-eeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEE
Q 036281 292 ELWIMKG----GFWIKHLTFGPF-IET-YQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 292 ~iW~L~~----~~W~~~~~i~~~-~~~-~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v 347 (371)
.|..|+- ..|.....-... ..+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 2334432 346543211000 012 23433 2677777654 57899999999987764
No 66
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=63.10 E-value=13 Score=32.96 Aligned_cols=138 Identities=9% Similarity=0.116 Sum_probs=64.0
Q ss_pred ceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCce-EEEe-CCCCCCCCCcc
Q 036281 187 SHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEV-FQEI-KGPSVPQTTTY 262 (371)
Q Consensus 187 ~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~-~~~i-~~P~~~~~~~~ 262 (371)
-.+.+|+..++.|+.+......-. .-..+.+ +|.+-..+.. ...|..+|+.+.+ +..+ .+... ..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~---d~~v~vwd~~~~~~~~~~~~~~~~-~~--- 101 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDK----IVTCVDWAPKSNRIVTCSQ---DRNAYVYEKRPDGTWKQTLVLLRL-NR--- 101 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSS----CEEEEEECTTTCCEEEEET---TSSEEEC------CCCCEEECCCC-SS---
T ss_pred CEEEEEEccCCceEEEEEEecCCc----eEEEEEEeCCCCEEEEEeC---CCeEEEEEcCCCCceeeeeEeccc-CC---
Confidence 456778888887776643211000 0011111 2332222222 2367888887765 3221 11111 11
Q ss_pred cccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecC-CCcceeeeEEeeCCEEEEE-EcCCeEEEEe
Q 036281 263 YQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGP-FIETYQPLGFWRKDEFLLE-SSDKRVILYD 338 (371)
Q Consensus 263 ~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~-~~~~~~~~~~~~~~~il~~-~~~~~l~~yd 338 (371)
....+.- -+|++.+.. .....+.||-++. ..|.....+.. +.....-+.+.+++.+++. ..++.+.+||
T Consensus 102 -----~v~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 102 -----AATFVRWSPNEDKFAVG--SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp -----CEEEEECCTTSSCCEEE--ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred -----ceEEEEECCCCCEEEEE--ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 1112221 245544444 2567899999887 55666666653 4434445566667765554 5678899999
Q ss_pred CCCC
Q 036281 339 SRYH 342 (371)
Q Consensus 339 ~~~~ 342 (371)
++++
T Consensus 175 ~~~~ 178 (377)
T 3dwl_C 175 AYVR 178 (377)
T ss_dssp ECCS
T ss_pred EEec
Confidence 8643
No 67
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=62.81 E-value=63 Score=26.54 Aligned_cols=106 Identities=9% Similarity=0.083 Sum_probs=58.1
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF 300 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~ 300 (371)
+|.+|+.... ..|..||..+.....+..+.. . ....+.. -+|+|.+... ....+.+| +...
T Consensus 77 ~g~l~v~~~~----~~i~~~d~~~~~~~~~~~~~~--~--------~p~~i~~~~~g~l~v~~~--~~~~i~~~--~~~~ 138 (270)
T 1rwi_B 77 AGTVYVTDFN----NRVVTLAAGSNNQTVLPFDGL--N--------YPEGLAVDTQGAVYVADR--GNNRVVKL--AAGS 138 (270)
T ss_dssp TCCEEEEETT----TEEEEECTTCSCCEECCCCSC--S--------SEEEEEECTTCCEEEEEG--GGTEEEEE--CTTC
T ss_pred CCCEEEEcCC----CEEEEEeCCCceEeeeecCCc--C--------CCcceEECCCCCEEEEEC--CCCEEEEE--ECCC
Confidence 5787766543 379999998876655432211 1 1223443 3677776542 34455555 3322
Q ss_pred eeEEEEecCCCcc--eeeeEEeeCCEEEEEEc-CCeEEEEeCCCCeEEEE
Q 036281 301 WIKHLTFGPFIET--YQPLGFWRKDEFLLESS-DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 301 W~~~~~i~~~~~~--~~~~~~~~~~~il~~~~-~~~l~~yd~~~~~~~~v 347 (371)
...... ..... ..-+.+..+|.+++... .+.+..||.+++.....
T Consensus 139 ~~~~~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~ 186 (270)
T 1rwi_B 139 KTQTVL--PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL 186 (270)
T ss_dssp CSCEEC--CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC
T ss_pred ceeEee--ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee
Confidence 211111 11112 22355566778877754 56899999988775543
No 68
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=62.53 E-value=88 Score=30.60 Aligned_cols=121 Identities=11% Similarity=0.090 Sum_probs=61.2
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCCc--eEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSNE--VFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFEL 293 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e--~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~i 293 (371)
..++..+|.+|...... .|.++|..+. .|+. ..+.................+...+|++.+.. ....+.-
T Consensus 60 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---~dg~l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS----RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGT---LDGRLIA 131 (668)
T ss_dssp CCCEEETTEEEEEEGGG----EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC---TTSEEEE
T ss_pred cCCEEECCEEEEECCCC----eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEc---CCCEEEE
Confidence 36688999999887654 8999998764 5654 22211100000000000111333566666543 2232222
Q ss_pred EEeeC--CceeEEEEecCCC--cc-eeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEE
Q 036281 294 WIMKG--GFWIKHLTFGPFI--ET-YQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 294 W~L~~--~~W~~~~~i~~~~--~~-~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v 347 (371)
+-.+. ..|..... .+.. .+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 132 lD~~tG~~~W~~~~~-~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTT-DPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EETTTCCEEEEEECS-CTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCCCCEeeeeccC-CCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 22222 44654321 1111 11 23433 2667766543 36899999999987765
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=62.49 E-value=1.2e+02 Score=29.75 Aligned_cols=66 Identities=11% Similarity=0.096 Sum_probs=40.6
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
+|.+.+.. .....+.+|-+.. ......+..+..-..-+.+.+++.+++. ..++.+.+||+.+++..
T Consensus 197 ~~~~l~~~--~~dg~i~~~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 197 DKPYMITA--SDDLTIKIWDYQT--KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp TCCEEEEE--CTTSEEEEEETTT--TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCCEEEEE--eCCCEEEEEECCC--CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 56555554 3567899998865 2233344333323344556667765554 55788999999987643
No 70
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=62.48 E-value=69 Score=27.00 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=58.6
Q ss_pred CceEEEE--------EecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eC-CeEEEEecCCCCCEE
Q 036281 222 NGYCYWV--------VCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YD-DCLSLLYSDKFAHSF 291 (371)
Q Consensus 222 ~G~lywl--------~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~-g~L~l~~~~~~~~~~ 291 (371)
+|.+|+. ... ..|..+|+.+.++..+..|..... ......+.. -+ |+|.+... ...+
T Consensus 28 ~g~l~~~~~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~~~~------~~~~~~i~~~~~~g~l~v~~~---~~~l 94 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPA----GEILRIDLKTGKKTVICKPEVNGY------GGIPAGCQCDRDANQLFVADM---RLGL 94 (314)
T ss_dssp TSCEEEEETTCEETTEEC----CEEEEECTTTCCEEEEECCEETTE------ECCEEEEEECSSSSEEEEEET---TTEE
T ss_pred CCCEEEEEeccccCCCCC----CEEEEEeCCCCcEEEEEecccCCC------CCCCceEEEecCCCcEEEEEC---CCCE
Confidence 5888887 233 379999998888877655321110 001223443 45 78877653 2344
Q ss_pred EEEEeeCCceeEE-EEecCCCcc--eeeeEEeeCCEEEEEEcC----------------CeEEEEeCCCCeEEEE
Q 036281 292 ELWIMKGGFWIKH-LTFGPFIET--YQPLGFWRKDEFLLESSD----------------KRVILYDSRYHEMRDL 347 (371)
Q Consensus 292 ~iW~L~~~~W~~~-~~i~~~~~~--~~~~~~~~~~~il~~~~~----------------~~l~~yd~~~~~~~~v 347 (371)
.+|-.+ ...... ......... ..-+.+..+|.+++.... ..++.||.+ ++++.+
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 444433 222111 110001111 223555668888887542 579999987 655543
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=62.16 E-value=77 Score=27.33 Aligned_cols=65 Identities=12% Similarity=0.234 Sum_probs=43.8
Q ss_pred CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeC--CE-EEEEEcCCeEEEEeCCCCe
Q 036281 277 DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRK--DE-FLLESSDKRVILYDSRYHE 343 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~--~~-il~~~~~~~l~~yd~~~~~ 343 (371)
|.+.+.. .....+.||-++...|.....+.....-..-+.+.++ +. ++....++.+.+||++++.
T Consensus 69 ~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 69 GTILASC--SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp CSEEEEE--ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred CCEEEEe--ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 5555544 2567899999998777777766544433444555555 55 4445678899999998873
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=62.02 E-value=76 Score=27.18 Aligned_cols=200 Identities=8% Similarity=-0.050 Sum_probs=96.3
Q ss_pred cceEEEeec--CCceEEEeccccccc-cCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceE
Q 036281 113 DGIFCLLKS--HTLINLWNVSLNEYR-GLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHV 189 (371)
Q Consensus 113 ~GLl~~~~~--~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (371)
++.+.+... ..+ .++|+.|++.. .++......+.+.. .....++.+++..+ + ++... .. ....+
T Consensus 100 g~~l~v~~~~~~~v-~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-~-l~~~~-~~--------~~~~i 166 (353)
T 3vgz_A 100 TQTLWFGNTVNSAV-TAIDAKTGEVKGRLVLDDRKRTEEVR-PLQPRELVADDATN-T-VYISG-IG--------KESVI 166 (353)
T ss_dssp TTEEEEEETTTTEE-EEEETTTCCEEEEEESCCCCCCSSCC-CCEEEEEEEETTTT-E-EEEEE-ES--------SSCEE
T ss_pred CCEEEEEecCCCEE-EEEeCCCCeeEEEEecCCCccccccC-CCCCceEEECCCCC-E-EEEEe-cC--------CCceE
Confidence 344544442 445 99999998753 34432211111111 11235566766543 2 22211 11 13457
Q ss_pred EEEEcCCCcee-ecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEE-EeCCCCCCCCCcccccCC
Q 036281 190 AVYNFSTNSWR-DLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQ-EIKGPSVPQTTTYYQSVK 267 (371)
Q Consensus 190 ~vy~~~~~~Wr-~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~ 267 (371)
.+++..++.=. .++.. ...+. .-.+.-+|...+.+.. ...|..+|+.+.+.. .+..+..... .
T Consensus 167 ~~~d~~~~~~~~~~~~~-~~~~~----~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~-------~ 231 (353)
T 3vgz_A 167 WVVDGGNIKLKTAIQNT-GKMST----GLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGKE-------H 231 (353)
T ss_dssp EEEETTTTEEEEEECCC-CTTCC----CCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSSC-------C
T ss_pred EEEcCCCCceEEEecCC-CCccc----eEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCCC-------c
Confidence 78888765321 11100 01111 1122335553333332 247889999887654 4444322111 0
Q ss_pred CcceEEE-eCCe-EEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCE-EEEEE-cCCeEEEEeCCCCe
Q 036281 268 TPWMLGT-YDDC-LSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDE-FLLES-SDKRVILYDSRYHE 343 (371)
Q Consensus 268 ~~~~L~~-~~g~-L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~~~~ 343 (371)
....+.. -+|+ |++.. .....+.+|-++...-.....+. .+ .-+.+..+|+ +++.. .++.+.+||.++++
T Consensus 232 ~~~~~~~s~dg~~l~~~~--~~~~~v~~~d~~~~~~~~~~~~~-~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 232 FFINISLDTARQRAFITD--SKAAEVLVVDTRNGNILAKVAAP-ES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp CEEEEEEETTTTEEEEEE--SSSSEEEEEETTTCCEEEEEECS-SC---CCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred ccceEEECCCCCEEEEEe--CCCCEEEEEECCCCcEEEEEEcC-CC---ceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 1122332 3454 54443 35577888877553323333321 11 2355666776 55555 46889999999887
Q ss_pred EEE
Q 036281 344 MRD 346 (371)
Q Consensus 344 ~~~ 346 (371)
...
T Consensus 306 ~~~ 308 (353)
T 3vgz_A 306 VVK 308 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 644
No 73
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=61.15 E-value=76 Score=26.93 Aligned_cols=73 Identities=8% Similarity=0.047 Sum_probs=44.8
Q ss_pred eCCeEEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEE-E-cCCeEEEE--eCCCCeEEEEE
Q 036281 275 YDDCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLE-S-SDKRVILY--DSRYHEMRDLG 348 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~~~l~~y--d~~~~~~~~v~ 348 (371)
-+|+..++.. .....+.+|-++. ..+.....+..... ..-+.+..+|+.++. . .++.+.+| |.++++++.+.
T Consensus 240 ~dg~~l~v~~-~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 240 PDGRHLYACD-RTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp TTSSEEEEEE-TTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEe-cCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 3454333332 4568899999984 45666655543322 334666777775554 3 35677777 77788887764
Q ss_pred E
Q 036281 349 I 349 (371)
Q Consensus 349 ~ 349 (371)
.
T Consensus 318 ~ 318 (343)
T 1ri6_A 318 R 318 (343)
T ss_dssp E
T ss_pred c
Confidence 3
No 74
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=60.78 E-value=93 Score=27.80 Aligned_cols=55 Identities=9% Similarity=0.033 Sum_probs=37.5
Q ss_pred EEEEeeCCceeEEEEecCCCcceeeeEEeeCCE-EEEEE--cCCeEEEEeCCCCeEEEE
Q 036281 292 ELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDE-FLLES--SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 292 ~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~--~~~~l~~yd~~~~~~~~v 347 (371)
+||+.+-.+...+.+|. ...-...+.+..||+ +++.. .++.+.+||.++++....
T Consensus 299 ~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 EVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 68888776677767773 322234466677887 65554 368899999999886544
No 75
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=60.64 E-value=78 Score=27.75 Aligned_cols=60 Identities=10% Similarity=0.126 Sum_probs=38.6
Q ss_pred CCCEEEEEEeeCC--ceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 287 FAHSFELWIMKGG--FWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 287 ~~~~~~iW~L~~~--~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
....+.||-++.. .........-+.....-+.+..+|+.++. ..++.+.+||+++++...
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 5678999999872 22222222223333455666778876665 567789999999987543
No 76
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=60.59 E-value=96 Score=30.58 Aligned_cols=115 Identities=12% Similarity=0.081 Sum_probs=56.0
Q ss_pred ceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEE
Q 036281 217 YNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSF 291 (371)
Q Consensus 217 ~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~ 291 (371)
.++.+ +|.|||..... ...|..+++.......+-.. ... ..-.|+. .+|+|++.. .....|
T Consensus 499 ~giavDp~~g~ly~td~~~--~~~I~~~~~dG~~~~~l~~~-~l~---------~PnGlavd~~~~~LY~aD--~~~~~I 564 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVTE-NIQ---------WPNGITLDLLSGRLYWVD--SKLHSI 564 (699)
T ss_dssp CCEECCSSSSCCEECCCSS--SCCEEBCCSSSCCCCEESCS-SCS---------SCCCEEECTTTCCEEEEE--TTTTEE
T ss_pred ceEEEccCCCcEEEcccCC--CCeEEEEeCCCCCeeEEEeC-CCC---------CccEEEEeccCCEEEEEe--cCCCeE
Confidence 34554 58999976432 24688888765433332111 111 0111333 357777755 244444
Q ss_pred EEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEEE-cCCeEEEEeCCCCeEEEE
Q 036281 292 ELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLES-SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 292 ~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~~~~~~v 347 (371)
.+.-++. .-.+.. +.....+..|.++.- .+.+++.. ..+.|..+|..+++...+
T Consensus 565 ~~~d~dG-~~~~~~-~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 565 SSIDVNG-GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp EEECSSS-SCCEEE-CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred EEEccCC-CceEEE-EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 4444432 111111 111112344544332 34566653 456899999987775444
No 77
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=60.52 E-value=80 Score=26.95 Aligned_cols=110 Identities=6% Similarity=-0.073 Sum_probs=64.7
Q ss_pred ceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeCCce
Q 036281 223 GYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFW 301 (371)
Q Consensus 223 G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W 301 (371)
|.+|--+... ....|..+|+.+.+. ..+++|.... ...+...+++|++... .... +++.+-..-
T Consensus 32 g~Lyvstg~~-~~s~v~~iD~~tg~v~~~i~l~~~~f----------geGi~~~g~~lyv~t~--~~~~--v~viD~~t~ 96 (266)
T 2iwa_A 32 DTLFESTGLY-GRSSVRQVALQTGKVENIHKMDDSYF----------GEGLTLLNEKLYQVVW--LKNI--GFIYDRRTL 96 (266)
T ss_dssp TEEEEEECST-TTCEEEEEETTTCCEEEEEECCTTCC----------EEEEEEETTEEEEEET--TCSE--EEEEETTTT
T ss_pred CeEEEECCCC-CCCEEEEEECCCCCEEEEEecCCCcc----------eEEEEEeCCEEEEEEe--cCCE--EEEEECCCC
Confidence 6777655421 245899999998765 5566654322 1234445778887763 4443 555554344
Q ss_pred eEEEEecCCCcceeeeEEeeCC-EEEEEEcCCeEEEEeCCCCe-EEEEEE
Q 036281 302 IKHLTFGPFIETYQPLGFWRKD-EFLLESSDKRVILYDSRYHE-MRDLGI 349 (371)
Q Consensus 302 ~~~~~i~~~~~~~~~~~~~~~~-~il~~~~~~~l~~yd~~~~~-~~~v~~ 349 (371)
..+-+|.... ..+.++..+| .+++...++.+...|++|.+ .+.+.+
T Consensus 97 ~v~~~i~~g~--~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 97 SNIKNFTHQM--KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEEEECCS--SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cEEEEEECCC--CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 4555553221 1234455555 56666667899999999976 455544
No 78
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=60.25 E-value=70 Score=26.24 Aligned_cols=185 Identities=11% Similarity=0.076 Sum_probs=92.8
Q ss_pred eecceEEEee-cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceE
Q 036281 111 PYDGIFCLLK-SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHV 189 (371)
Q Consensus 111 s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (371)
..+|-+.+.. ...+ +++||.++....++.... ....++.+++.. . ++.. .. . ...+
T Consensus 75 ~~~g~l~v~~~~~~i-~~~d~~~~~~~~~~~~~~---------~~p~~i~~~~~g-~--l~v~-~~-~--------~~~i 131 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRV-VTLAAGSNNQTVLPFDGL---------NYPEGLAVDTQG-A--VYVA-DR-G--------NNRV 131 (270)
T ss_dssp CTTCCEEEEETTTEE-EEECTTCSCCEECCCCSC---------SSEEEEEECTTC-C--EEEE-EG-G--------GTEE
T ss_pred CCCCCEEEEcCCCEE-EEEeCCCceEeeeecCCc---------CCCcceEECCCC-C--EEEE-EC-C--------CCEE
Confidence 3466655555 3455 899998877665543321 112567777643 2 2222 11 1 3345
Q ss_pred EEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCC
Q 036281 190 AVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVK 267 (371)
Q Consensus 190 ~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 267 (371)
.+|+.++......... ... ...++.+ +|.+|+.... ...|..||..+.......... . .
T Consensus 132 ~~~~~~~~~~~~~~~~--~~~----~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~-~-~-------- 192 (270)
T 1rwi_B 132 VKLAAGSKTQTVLPFT--GLN----DPDGVAVDNSGNVYVTDTD---NNRVVKLEAESNNQVVLPFTD-I-T-------- 192 (270)
T ss_dssp EEECTTCCSCEECCCC--SCC----SCCCEEECTTCCEEEEEGG---GTEEEEECTTTCCEEECCCSS-C-C--------
T ss_pred EEEECCCceeEeeccc--cCC----CceeEEEeCCCCEEEEECC---CCEEEEEecCCCceEeecccC-C-C--------
Confidence 6665555433322111 110 1123433 5887765543 247999999877654432211 1 1
Q ss_pred CcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceee--eEEeeCCEEEEEE-cCCeEEEEeCCCCe
Q 036281 268 TPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQP--LGFWRKDEFLLES-SDKRVILYDSRYHE 343 (371)
Q Consensus 268 ~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~-~~~~l~~yd~~~~~ 343 (371)
....+.. -+|.|.+.. .....+.+|-.+... . ..+ +......| +++..+|.+++.. .++.+..|++..++
T Consensus 193 ~p~~i~~d~~g~l~v~~--~~~~~v~~~~~~~~~-~--~~~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 193 APWGIAVDEAGTVYVTE--HNTNQVVKLLAGSTT-S--TVL-PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp SEEEEEECTTCCEEEEE--TTTSCEEEECTTCSC-C--EEC-CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred CceEEEECCCCCEEEEE--CCCCcEEEEcCCCCc-c--eee-ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 1223443 356777655 234556655544311 1 111 21222334 4455677887775 46789999887654
No 79
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=60.12 E-value=94 Score=27.66 Aligned_cols=113 Identities=7% Similarity=-0.051 Sum_probs=61.1
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF 300 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~ 300 (371)
+|.++..... ...|..+|+.+.+......+..... .......+.. -+|++.+.. .....+.+|-++...
T Consensus 133 ~~~~~~~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~s~--~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 133 NTRLAIPLLE---DEGMDVLDINSGQTVRLSPPEKYKK-----KLGFVETISIPEHNELWVSQ--MQANAVHVFDLKTLA 202 (433)
T ss_dssp SSEEEEEBTT---SSSEEEEETTTCCEEEECCCHHHHT-----TCCEEEEEEEGGGTEEEEEE--GGGTEEEEEETTTCC
T ss_pred CCeEEEEeCC---CCeEEEEECCCCeEeeecCcccccc-----cCCceeEEEEcCCCEEEEEE--CCCCEEEEEECCCce
Confidence 4555444332 2358899999876654322111000 0001112222 367776655 356789999887522
Q ss_pred eeEEEEecCCCcceeeeEEeeCCEEE-EEE-cCCeEEEEeCCCCeEEE
Q 036281 301 WIKHLTFGPFIETYQPLGFWRKDEFL-LES-SDKRVILYDSRYHEMRD 346 (371)
Q Consensus 301 W~~~~~i~~~~~~~~~~~~~~~~~il-~~~-~~~~l~~yd~~~~~~~~ 346 (371)
....+........-+.+.++++.+ +.. .++.+.+||+++++...
T Consensus 203 --~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 203 --YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp --EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred --EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 233333332233445666667654 444 46789999999887643
No 80
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=59.37 E-value=97 Score=27.57 Aligned_cols=190 Identities=10% Similarity=0.080 Sum_probs=94.9
Q ss_pred eecceEEEee--cCCceEEEeccccccc-cCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 111 PYDGIFCLLK--SHTLINLWNVSLNEYR-GLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 111 s~~GLl~~~~--~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
+.+|-+++.. +..+ .+||+.+++.. .++... ....++.+++.. .+ ++... . ..-
T Consensus 178 ~~~~~~~~s~~~d~~v-~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~-l~~~~---~-------~~~ 234 (433)
T 3bws_A 178 PEHNELWVSQMQANAV-HVFDLKTLAYKATVDLTG----------KWSKILLYDPIR-DL-VYCSN---W-------ISE 234 (433)
T ss_dssp GGGTEEEEEEGGGTEE-EEEETTTCCEEEEEECSS----------SSEEEEEEETTT-TE-EEEEE---T-------TTT
T ss_pred cCCCEEEEEECCCCEE-EEEECCCceEEEEEcCCC----------CCeeEEEEcCCC-CE-EEEEe---c-------CCC
Confidence 4466555554 2455 99999886543 333111 112455555543 22 22221 0 134
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCC-----CCcEEEEEECCCceEEEe-CCCCCCCC
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPD-----YSKAILAFSMSNEVFQEI-KGPSVPQT 259 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~-----~~~~Il~fD~~~e~~~~i-~~P~~~~~ 259 (371)
.+.+|+.+++.....-... ..+ ..+.+ +|...+.+.... ....|..+|+.+.+.... ..+..
T Consensus 235 ~i~~~d~~~~~~~~~~~~~-~~~------~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~--- 304 (433)
T 3bws_A 235 DISVIDRKTKLEIRKTDKI-GLP------RGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN--- 304 (433)
T ss_dssp EEEEEETTTTEEEEECCCC-SEE------EEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC---
T ss_pred cEEEEECCCCcEEEEecCC-CCc------eEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC---
Confidence 6788888876543321110 001 11222 454444443210 134788999987655332 11111
Q ss_pred CcccccCCCcceEE-EeCC-eEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-Ec------
Q 036281 260 TTYYQSVKTPWMLG-TYDD-CLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SS------ 330 (371)
Q Consensus 260 ~~~~~~~~~~~~L~-~~~g-~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~------ 330 (371)
...+. .-+| .|.+.. .....+.+|-++. ......+.... -..-+++.++|+.++. ..
T Consensus 305 ---------~~~~~~~~~g~~l~~~~--~~~~~v~v~d~~~--~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~ 370 (433)
T 3bws_A 305 ---------KRHIVSGNTENKIYVSD--MCCSKIEVYDLKE--KKVQKSIPVFD-KPNTIALSPDGKYLYVSCRGPNHPT 370 (433)
T ss_dssp ---------EEEEEECSSTTEEEEEE--TTTTEEEEEETTT--TEEEEEEECSS-SEEEEEECTTSSEEEEEECCCCCTT
T ss_pred ---------cceEEECCCCCEEEEEe--cCCCEEEEEECCC--CcEEEEecCCC-CCCeEEEcCCCCEEEEEecCCCccc
Confidence 11222 2345 455544 4667899998875 33333443222 2334566677765444 33
Q ss_pred ---------CCeEEEEeCCCCeEEEE
Q 036281 331 ---------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 331 ---------~~~l~~yd~~~~~~~~v 347 (371)
++.+.+||+++++....
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred cccccccccceEEEEEECCCCcEEEE
Confidence 24899999999876543
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=58.62 E-value=1.3e+02 Score=29.68 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=57.5
Q ss_pred cEEEEEECCCceEEEeC-CCCCCCCCcccccCCCcceEEE-eC--CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCC
Q 036281 236 KAILAFSMSNEVFQEIK-GPSVPQTTTYYQSVKTPWMLGT-YD--DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFI 311 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~~-~~--g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~ 311 (371)
..|..+|+.+++...+. +..... ....+.- .+ |.+.+.. ..+..+.||-++...|.....+..+.
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~---------~V~~l~~s~~~~~~~l~s~--s~Dg~I~vwd~~~~~~~~~~~~~~h~ 99 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEG---------PVWRVDWAHPKFGTILASC--SYDGKVLIWKEENGRWSQIAVHAVHS 99 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSS---------CEEEEEECCTTSCSEEEEE--ETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred CcEEEEecCCCCCccceeccCCcC---------ceEEEEecCCCCCCEEEEE--eCCCeEEEEECCCCcccccccccCCC
Confidence 36778887765554432 222111 1223333 22 5555544 35688999999987777777665544
Q ss_pred cceeeeEEeeC--CEE-EEEEcCCeEEEEeCCCC
Q 036281 312 ETYQPLGFWRK--DEF-LLESSDKRVILYDSRYH 342 (371)
Q Consensus 312 ~~~~~~~~~~~--~~i-l~~~~~~~l~~yd~~~~ 342 (371)
.-..-+.+.++ +.+ +....++.+.+||++++
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 33444555555 554 44467889999999887
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=57.84 E-value=94 Score=32.61 Aligned_cols=192 Identities=7% Similarity=-0.036 Sum_probs=0.0
Q ss_pred EEeeecceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 108 HIGPYDGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 108 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
.+...+.++........+.++|..+++........ ......+.+.+... .++.... ..
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h---------~~~v~~l~~s~dg~--~l~s~~~-----------dg 1025 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH---------KKAVRHIQFTADGK--TLISSSE-----------DS 1025 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC---------SSCCCCEEECSSSS--CEEEECS-----------SS
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC---------CCceEEEEECCCCC--EEEEEcC-----------CC
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCC
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVK 267 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 267 (371)
.+.+|+..++................... +|.+.-....+ .|..+|+.+.+....-.......
T Consensus 1026 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-----~~~l~~~~~dg----~v~vwd~~~~~~~~~~~~~~~~v-------- 1088 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVFLQAHQETVKDFRLLQ-----DSRLLSWSFDG----TVKVWNVITGRIERDFTCHQGTV-------- 1088 (1249)
T ss_dssp BEEEEETTTTEEECCBCCSSCEEEEEECS-----SSEEEEEESSS----EEEEEETTTTCCCEEEECCSSCC--------
T ss_pred EEEEEECCCCceEEEecCCCcEEEEEEcC-----CCcEEEEECCC----cEEEEECCCCceeEEEcccCCcE--------
Q ss_pred CcceEEEeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCe
Q 036281 268 TPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 268 ~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 343 (371)
......-+|++.+.. .....+.||-+ ........+..+.....-+.+..+|.+++. ..++.+.+||+++++
T Consensus 1089 -~~~~~s~d~~~l~s~--s~d~~v~iwd~--~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1089 -LSCAISSDATKFSST--SADKTAKIWSF--DLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp -CCEEECSSSSSCEEE--CCSSCCCEECS--SSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred -EEEEECCCCCEEEEE--cCCCcEEEEEC--CCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
No 83
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=57.78 E-value=81 Score=26.18 Aligned_cols=194 Identities=11% Similarity=0.091 Sum_probs=96.3
Q ss_pred EEEeeecceEEEeec--CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCC
Q 036281 107 IHIGPYDGIFCLLKS--HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFH 184 (371)
Q Consensus 107 ~~~~s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 184 (371)
.+....+|-+.+... ..+ .++||. ++...++.+.. .....++..|+.. . +.... .
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v-~~~~~~-~~~~~~~~~~~--------~~~~~~i~~~~~g-~--l~v~~---~------- 80 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKI-SSLDQS-GRIKEFEVPTP--------DAKVMCLIVSSLG-D--IWFTE---N------- 80 (300)
T ss_dssp EEEECTTSCEEEEETTTTEE-EEECTT-SCEEEEECSST--------TCCEEEEEECTTS-C--EEEEE---T-------
T ss_pred eeeECCCCCEEEEcCCCCeE-EEECCC-CceEEEECCCC--------CCcceeEEECCCC-C--EEEEe---c-------
Confidence 344445676666652 445 889988 66655432211 1112456666432 2 22211 0
Q ss_pred CcceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcc
Q 036281 185 DFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTY 262 (371)
Q Consensus 185 ~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~ 262 (371)
..-.+..|+.. +.++...... .. ....++.+ +|.+|+.... ...|..+|.. .++..+.+|....
T Consensus 81 ~~~~v~~~d~~-g~~~~~~~~~-~~----~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~~~~~~~~~~~---- 146 (300)
T 2qc5_A 81 GANKIGKLSKK-GGFTEYPLPQ-PD----SGPYGITEGLNGDIWFTQLN---GDRIGKLTAD-GTIYEYDLPNKGS---- 146 (300)
T ss_dssp TTTEEEEECTT-SCEEEEECSS-TT----CCEEEEEECSTTCEEEEETT---TTEEEEECTT-SCEEEEECSSTTC----
T ss_pred CCCeEEEECCC-CCeEEecCCC-CC----CCCccceECCCCCEEEEccC---CCeEEEECCC-CCEEEccCCCCCC----
Confidence 02346667666 5554332110 00 01123333 5777655432 2479999998 6666665554221
Q ss_pred cccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceee--eEEeeCCEEEEEEc-CCeEEEEe
Q 036281 263 YQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQP--LGFWRKDEFLLESS-DKRVILYD 338 (371)
Q Consensus 263 ~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~--~~~~~~~~il~~~~-~~~l~~yd 338 (371)
....+.. -+|+|.+... ....+.++-. +..... +.. +.. ...| +.+..+|.+++... .+.+..||
T Consensus 147 -----~~~~i~~d~~g~l~v~~~--~~~~i~~~~~-~g~~~~-~~~-~~~-~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 215 (300)
T 2qc5_A 147 -----YPAFITLGSDNALWFTEN--QNNSIGRITN-TGKLEE-YPL-PTN-AAAPVGITSGNDGALWFVEIMGNKIGRIT 215 (300)
T ss_dssp -----CEEEEEECTTSSEEEEET--TTTEEEEECT-TCCEEE-EEC-SST-TCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred -----CceeEEECCCCCEEEEec--CCCeEEEECC-CCcEEE-eeC-CCC-CCCcceEEECCCCCEEEEccCCCEEEEEc
Confidence 1223443 4677766552 3344433333 233332 222 211 2333 44455778888764 45799999
Q ss_pred CCCCeEEEEEE
Q 036281 339 SRYHEMRDLGI 349 (371)
Q Consensus 339 ~~~~~~~~v~~ 349 (371)
+ ++++..+..
T Consensus 216 ~-~g~~~~~~~ 225 (300)
T 2qc5_A 216 T-TGEISEYDI 225 (300)
T ss_dssp T-TCCEEEEEC
T ss_pred C-CCcEEEEEC
Confidence 8 566665543
No 84
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=57.70 E-value=85 Score=26.41 Aligned_cols=65 Identities=17% Similarity=0.157 Sum_probs=42.7
Q ss_pred CeEEEEecCCCCCEEEEEEeeC-------CceeEEEEecCCCcceeeeEEeeC--CEEEE-EEcCCeEEEEeCCCCe
Q 036281 277 DCLSLLYSDKFAHSFELWIMKG-------GFWIKHLTFGPFIETYQPLGFWRK--DEFLL-ESSDKRVILYDSRYHE 343 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~-------~~W~~~~~i~~~~~~~~~~~~~~~--~~il~-~~~~~~l~~yd~~~~~ 343 (371)
|.+.+.. .....+.||-++. ..|.....+........-+.+..+ +.+++ ...++.+.+||+++++
T Consensus 71 ~~~l~s~--~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 71 GRIIASA--SYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp CSEEEEE--ETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred CCEEEEE--cCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 6655544 2567899999986 356666666554433444555555 65444 4678899999998765
No 85
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=57.34 E-value=68 Score=31.50 Aligned_cols=122 Identities=10% Similarity=0.021 Sum_probs=61.7
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCCc--eEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSNE--VFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFEL 293 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e--~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~i 293 (371)
..++..+|.+|.....+ .|.++|..+. .|+. +.+.................+...+|+|.+.. ....+..
T Consensus 71 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~---~dg~l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS----VVHAIDTRTGNRIWTY-DPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA---WDGRLIA 142 (677)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTTEEEEEE-CCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC---TTSEEEE
T ss_pred eCCEEECCEEEEECCCC----eEEEEECCCCcEEEEE-cCCCCccccccccccCCCCCceEECCEEEEEc---CCCEEEE
Confidence 35688999999887654 7999998764 4553 22211100000000001112334566666643 2233333
Q ss_pred EEeeC--CceeEEEEecCC--Ccc-eeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEE
Q 036281 294 WIMKG--GFWIKHLTFGPF--IET-YQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 294 W~L~~--~~W~~~~~i~~~--~~~-~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v 347 (371)
+-.+. ..|......+.. ..+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 143 lD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 143 LDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 32222 345543210111 111 23333 2567777643 47899999999987765
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=56.97 E-value=1.1e+02 Score=27.23 Aligned_cols=99 Identities=9% Similarity=-0.004 Sum_probs=57.2
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|..+|+.+.+. ..+..+. ....+.- -+|+..+.........+.||-+......+...+..+..-
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~------------~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGS------------QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSS------------CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CEEEEEECCCCCEEEEEeCCC------------cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 4688888877554 2332211 1122222 356655554334678999999987556666655444323
Q ss_pred eeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 314 YQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 314 ~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
..-+.+..+|..++. ..++.+.+||+.+++...
T Consensus 352 v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 352 VLYSALSPDGRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp CCEEEECTTSSEEEEECTTSEEEEEECCC-----
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcccc
Confidence 334566677876665 467889999999887533
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=56.85 E-value=93 Score=26.60 Aligned_cols=69 Identities=7% Similarity=0.003 Sum_probs=41.1
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
+|++.+.. .....+.+|-+.. .......+.....-..-+.+.+++..++. ..++.+.+||+++++....
T Consensus 186 ~~~~l~~~--~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 186 KGKYIIAG--HKDGKISKYDVSN-NYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp GGCEEEEE--ETTSEEEEEETTT-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEE--cCCCEEEEEECCC-CcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee
Confidence 45444443 3567899998875 12333444333323344555567765554 5678999999998875443
No 88
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=56.29 E-value=1.6e+02 Score=29.13 Aligned_cols=205 Identities=9% Similarity=-0.044 Sum_probs=104.0
Q ss_pred EEeeecceEEEee-cCCceEEEeccccccccCCCCCCC--CCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCC
Q 036281 108 HIGPYDGIFCLLK-SHTLINLWNVSLNEYRGLPECRPR--LPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFH 184 (371)
Q Consensus 108 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~--~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~ 184 (371)
+..-.+|-|-+.. ...+ ..++|.++.+..+...+.. ..... .....++..|... . +.+...
T Consensus 318 i~~D~~g~lWigt~~~Gl-~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~v~~i~~d~~g-~---lWigt~--------- 381 (781)
T 3v9f_A 318 IFQDSFNNIWIGTWGGGI-NFISNAPPTFHTWSYSPTQMNESSLS--NKVVSSVCDDGQG-K---LWIGTD--------- 381 (781)
T ss_dssp EEECSSCCEEEEEBSSCE-EEECSSCCSCEEEC----CCCSSCCS--SSCEEEEEECTTS-C---EEEEEB---------
T ss_pred EEEeCCCCEEEEecCCeE-EEeCCCCCcceeeccCccccccCCCC--CcceEEEEEcCCC-C---EEEEeC---------
Confidence 3334456666665 5667 8899988877665432110 00000 1112444444322 1 223211
Q ss_pred CcceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcc
Q 036281 185 DFSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTY 262 (371)
Q Consensus 185 ~~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~ 262 (371)
...+..|+.+++.++..... ...+.. .-.+++. +|.+ |+.... ..|..||..+.+++.+..+.....
T Consensus 382 -~~Gl~~~~~~~~~~~~~~~~-~~~~~~--~v~~i~~d~~g~l-Wigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~--- 450 (781)
T 3v9f_A 382 -GGGINVFENGKRVAIYNKEN-RELLSN--SVLCSLKDSEGNL-WFGTYL---GNISYYNTRLKKFQIIELEKNELL--- 450 (781)
T ss_dssp -SSCEEEEETTEEEEECC------CCCS--BEEEEEECTTSCE-EEEETT---EEEEEECSSSCEEEECCSTTTCCC---
T ss_pred -CCcEEEEECCCCeEEEccCC-CCCCCc--ceEEEEECCCCCE-EEEecc---CCEEEEcCCCCcEEEeccCCCCCC---
Confidence 23456677766655544210 011100 1122333 4655 555431 379999999999988764411111
Q ss_pred cccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCC---CcceeeeEEeeCCEEEEEEcCCeEEEEe
Q 036281 263 YQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPF---IETYQPLGFWRKDEFLLESSDKRVILYD 338 (371)
Q Consensus 263 ~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~---~~~~~~~~~~~~~~il~~~~~~~l~~yd 338 (371)
....+.+ .+|.|.+... ..+.++-.+...|......... .....-+....+|.|++.....+|+.||
T Consensus 451 -----~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~ 521 (781)
T 3v9f_A 451 -----DVRVFYEDKNKKIWIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYT 521 (781)
T ss_dssp -----CEEEEEECTTSEEEEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEEC
T ss_pred -----eEEEEEECCCCCEEEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEe
Confidence 2334444 4678777552 3444443333456554332211 1122334455678899988767899999
Q ss_pred CCCCeEEEEE
Q 036281 339 SRYHEMRDLG 348 (371)
Q Consensus 339 ~~~~~~~~v~ 348 (371)
+++++++.+.
T Consensus 522 ~~~~~~~~~~ 531 (781)
T 3v9f_A 522 PDMQLVRKFN 531 (781)
T ss_dssp TTCCEEEEEC
T ss_pred CCCCeEEEcc
Confidence 9999887763
No 89
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=56.13 E-value=99 Score=26.67 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=55.1
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC-CCcc
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP-FIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~-~~~~ 313 (371)
..|..+|+++.+...+....... ....+.- -+|.+.+.. .....+.||-+....-. ...+.. +..-
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~---------~i~~~~~~pdg~~lasg--~~dg~i~iwd~~~~~~~-~~~~~~~h~~~ 216 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDV---------EYSSGVLHKDSLLLALY--SPDGILDVYNLSSPDQA-SSRFPVDEEAK 216 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSC---------CCCEEEECTTSCEEEEE--CTTSCEEEEESSCTTSC-CEECCCCTTSC
T ss_pred CcEEEEECCCCcEEEEEecCCCC---------ceEEEEECCCCCEEEEE--cCCCEEEEEECCCCCCC-ccEEeccCCCC
Confidence 46888998887664332111110 1122222 356666654 46789999998862211 023333 3333
Q ss_pred eeeeEEeeCCEEEEEEcCCeEEEEeCCCCe
Q 036281 314 YQPLGFWRKDEFLLESSDKRVILYDSRYHE 343 (371)
Q Consensus 314 ~~~~~~~~~~~il~~~~~~~l~~yd~~~~~ 343 (371)
..-+.+.++|..++...++.+.+||+++.+
T Consensus 217 v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 217 IKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp EEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred EEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 444566678877776556689999998764
No 90
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=55.46 E-value=92 Score=26.12 Aligned_cols=108 Identities=10% Similarity=-0.039 Sum_probs=61.6
Q ss_pred Cce-EEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCC
Q 036281 222 NGY-CYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGG 299 (371)
Q Consensus 222 ~G~-lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~ 299 (371)
+|. +||..... ..|..+|..+. ++.+..|.. ....+.. -+|+|.+.. .....+.+|-.+..
T Consensus 38 ~g~~l~~~~~~~---~~i~~~~~~~~-~~~~~~~~~-----------~~~~l~~~~dg~l~v~~--~~~~~i~~~d~~~g 100 (296)
T 3e5z_A 38 ARSAVIFSDVRQ---NRTWAWSDDGQ-LSPEMHPSH-----------HQNGHCLNKQGHLIACS--HGLRRLERQREPGG 100 (296)
T ss_dssp GGTEEEEEEGGG---TEEEEEETTSC-EEEEESSCS-----------SEEEEEECTTCCEEEEE--TTTTEEEEECSTTC
T ss_pred CCCEEEEEeCCC---CEEEEEECCCC-eEEEECCCC-----------CcceeeECCCCcEEEEe--cCCCeEEEEcCCCC
Confidence 465 89987653 48999999988 766654432 1223333 468876654 34466777766443
Q ss_pred ceeEEEEecCCCcc--eeeeEEeeCCEEEEEE------------------cCCeEEEEeCCCCeEEEE
Q 036281 300 FWIKHLTFGPFIET--YQPLGFWRKDEFLLES------------------SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 300 ~W~~~~~i~~~~~~--~~~~~~~~~~~il~~~------------------~~~~l~~yd~~~~~~~~v 347 (371)
.............. ..-+.+..+|.+++.. ....++.||.+ ++++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 33222111011101 2235666788888852 13478999987 655544
No 91
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=55.24 E-value=96 Score=26.25 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=31.6
Q ss_pred CCCEEEEEEeeCCceeEEEEecC---------CCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCe
Q 036281 287 FAHSFELWIMKGGFWIKHLTFGP---------FIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~~i~~---------~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 343 (371)
....+.||-++.. .....+.. ......-+++.++|++|+. ..++.+.+||++|++
T Consensus 275 ~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 275 TGPSIKIWDLEGK--IIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp ETTEEEEEETTTT--EEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCEEEEEECCCC--eEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 3567888877651 11122211 1112233566678877666 567889999999875
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=55.16 E-value=1.1e+02 Score=26.78 Aligned_cols=176 Identities=10% Similarity=0.036 Sum_probs=88.8
Q ss_pred CCceEEEecccccccc-CCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCcee
Q 036281 122 HTLINLWNVSLNEYRG-LPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWR 200 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr 200 (371)
..+ .+||..+++... ++... .. .++.+++.. .+-++.-. . .-.+.+++..++.-.
T Consensus 12 ~~v-~v~d~~~~~~~~~~~~~~---------~~--~~~~~s~dg-~~l~~~~~---~--------d~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 12 DNI-SVIDVTSNKVTATIPVGS---------NP--MGAVISPDG-TKVYVANA---H--------SNDVSIIDTATNNVI 67 (391)
T ss_dssp TEE-EEEETTTTEEEEEEECSS---------SE--EEEEECTTS-SEEEEEEG---G--------GTEEEEEETTTTEEE
T ss_pred CEE-EEEECCCCeEEEEeecCC---------Cc--ceEEECCCC-CEEEEECC---C--------CCeEEEEECCCCeEE
Confidence 344 999999887553 22211 11 445555432 22222211 1 356788888776543
Q ss_pred ecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEEE-eC
Q 036281 201 DLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLGT-YD 276 (371)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~~-~~ 276 (371)
..-... ..+ ..+.+ +|..-+.+... ...|..+|+.+.+... +.... ....+.. .+
T Consensus 68 ~~~~~~-~~v------~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~~------------~~~~~~~s~d 126 (391)
T 1l0q_A 68 ATVPAG-SSP------QGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVKTGK------------SPLGLALSPD 126 (391)
T ss_dssp EEEECS-SSE------EEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECSS------------SEEEEEECTT
T ss_pred EEEECC-CCc------cceEECCCCCEEEEEECC--CCEEEEEECCCCeEEEEEeCCC------------CcceEEECCC
Confidence 221110 101 11222 35433333322 3479999998876533 22211 1122332 35
Q ss_pred CeEE-EEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEE-EEE-cCCeEEEEeCCCCeEEEE
Q 036281 277 DCLS-LLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFL-LES-SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 277 g~L~-l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~-~~~~l~~yd~~~~~~~~v 347 (371)
|+.. +.. .....+.+|-+.......... ... -...+.+..+|+.+ +.. .++.+.+||+++++....
T Consensus 127 g~~l~~~~--~~~~~v~~~d~~~~~~~~~~~--~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 127 GKKLYVTN--NGDKTVSVINTVTKAVINTVS--VGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDT 195 (391)
T ss_dssp SSEEEEEE--TTTTEEEEEETTTTEEEEEEE--CCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCEEEEEe--CCCCEEEEEECCCCcEEEEEe--cCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 5544 443 456789999876533332222 222 12445566677644 443 467899999999876543
No 93
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=54.53 E-value=99 Score=26.21 Aligned_cols=181 Identities=8% Similarity=0.009 Sum_probs=87.7
Q ss_pred CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCce--
Q 036281 122 HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSW-- 199 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~W-- 199 (371)
..+ .++|+.|++....-..+. .. . ++.+++..+ + ++.... ..-.+.+++..++.-
T Consensus 20 ~~v-~~~d~~~~~~~~~~~~~~--------~~-~-~~~~s~dg~-~-l~~~~~----------~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 20 RRI-SFFSTDTLEILNQITLGY--------DF-V-DTAITSDCS-N-VVVTSD----------FCQTLVQIETQLEPPKV 76 (331)
T ss_dssp TEE-EEEETTTCCEEEEEECCC--------CE-E-EEEECSSSC-E-EEEEES----------TTCEEEEEECSSSSCEE
T ss_pred CeE-EEEeCcccceeeeEEccC--------Cc-c-eEEEcCCCC-E-EEEEeC----------CCCeEEEEECCCCceeE
Confidence 445 999999988654322221 12 2 666666543 2 222211 033678888887653
Q ss_pred eecCccccccceeccccceEEECce-EEEEEecCCCCcEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEEE-eC
Q 036281 200 RDLKGFEMRFDYMVDRIYNVYLNGY-CYWVVCRPDYSKAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLGT-YD 276 (371)
Q Consensus 200 r~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~~-~~ 276 (371)
+..... ..+.. .-.+.-+|. +| ..........|..+|+.+.+... ++... ....+.. -+
T Consensus 77 ~~~~~~--~~~~~---~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------------~~~~~~~spd 138 (331)
T 3u4y_A 77 VAIQEG--QSSMA---DVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTIPIPY------------DAVGIAISPN 138 (331)
T ss_dssp EEEEEC--SSCCC---CEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEEECCT------------TEEEEEECTT
T ss_pred EecccC--CCCcc---ceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEEECCC------------CccceEECCC
Confidence 111110 00110 011222454 44 32221011279999998876533 32211 1122332 45
Q ss_pred Ce-EEEEecCCCCCEEEEEEeeC-CceeEE-EEecCCCcceeeeEEeeCCE-EEEEE-cCCeEEEEeCCCCeE
Q 036281 277 DC-LSLLYSDKFAHSFELWIMKG-GFWIKH-LTFGPFIETYQPLGFWRKDE-FLLES-SDKRVILYDSRYHEM 344 (371)
Q Consensus 277 g~-L~l~~~~~~~~~~~iW~L~~-~~W~~~-~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~~~~~ 344 (371)
|+ |.+... .....+.+|.++. ..-... ....+...-..-+.+.++|+ +++.. .++.+.+||+++++.
T Consensus 139 g~~l~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 139 GNGLILIDR-SSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp SSCEEEEEE-TTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCEEEEEec-CCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 65 544432 2233389999876 221111 11112211234456667886 55554 467899999998774
No 94
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=54.51 E-value=1.8e+02 Score=29.19 Aligned_cols=144 Identities=12% Similarity=0.049 Sum_probs=75.0
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTY 262 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~ 262 (371)
.-.++++++.+..-+.+... .+. ...++.+ +|.|||..... ...|..+++....-..+-. ....
T Consensus 492 ~~~I~v~~ldG~~~~~l~~~--~l~----~P~gIaVDp~~g~LYwtD~g~--~~~I~~~~~dG~~~~~lv~-~~l~---- 558 (791)
T 3m0c_C 492 LGTVSVADTKGVKRKTLFRE--NGS----KPRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGVDIYSLVT-ENIQ---- 558 (791)
T ss_dssp TTEEEEEETTSSSEEEEEEC--TTC----CEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCCEEEEEC-SSCS----
T ss_pred CCeEEEEeCCCCeEEEEEeC--CCC----CcceEEEecCCCCEEEecCCC--CCeEEEEecCCCceEEEEe-CCCC----
Confidence 44678888876554443211 111 1234555 48999987543 3579999998765544321 1111
Q ss_pred cccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEEE-cCCeEEEEe
Q 036281 263 YQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLES-SDKRVILYD 338 (371)
Q Consensus 263 ~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd 338 (371)
....|+. .+|+|++.. .....|..--++. .-.++. +.....+..|+++.- ++.|++.. ....|...|
T Consensus 559 -----~P~GLavD~~~~~LYwaD--~~~~~I~~~d~dG-~~~~~v-~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 559 -----WPNGITLDLLSGRLYWVD--SKLHSISSIDVNG-GNRKTI-LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp -----CEEEEEEETTTTEEEEEE--TTTTEEEEEETTS-CSCEEE-EECTTTTSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -----CceEEEEecCCCeEEEEe--CCCCcEEEEecCC-CceEEE-ecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 1222443 578888875 3444444333332 212221 111112456666543 45677764 457889999
Q ss_pred CCCCeEEEEEEec
Q 036281 339 SRYHEMRDLGITG 351 (371)
Q Consensus 339 ~~~~~~~~v~~~~ 351 (371)
..+++-..+-..+
T Consensus 630 k~tG~~~~~l~~~ 642 (791)
T 3m0c_C 630 RLTGSDVNLLAEN 642 (791)
T ss_dssp TTTCCCCEEEECS
T ss_pred CCCCcceEEeecC
Confidence 8777543333333
No 95
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=54.40 E-value=1.1e+02 Score=26.73 Aligned_cols=67 Identities=18% Similarity=0.049 Sum_probs=38.8
Q ss_pred CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCC-EEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 277 DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKD-EFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
+.+.+.. .....+.||-+.. ......+.....-..-+++..++ .+|.. ..++.+.+||.++++....
T Consensus 239 ~~~la~g--~~d~~i~~wd~~~--~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 239 DDTFACG--DETGNVSLVNIKN--PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp TTEEEEE--ESSSCEEEEESSC--GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cceEEEe--ecccceeEEECCC--CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 4554443 3567789998875 12223333222223345555555 45554 5678899999999876443
No 96
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=54.35 E-value=1.3e+02 Score=28.55 Aligned_cols=114 Identities=9% Similarity=-0.011 Sum_probs=66.0
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEEEeC-CeEEEEecCCCCCEEEEEEeeC-
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLGTYD-DCLSLLYSDKFAHSFELWIMKG- 298 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~~~~-g~L~l~~~~~~~~~~~iW~L~~- 298 (371)
+|...+.+... ...|..+|+.+.+... ++...... .+....+..-+ |.+.+.. .....++.||-.+.
T Consensus 334 dg~~l~va~~~--~~~v~v~D~~tg~l~~~i~~g~~ph-------~g~g~~~~~p~~g~~~~s~-~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 334 SHRYFMTAANN--SNKVAVIDSKDRRLSALVDVGKTPH-------PGRGANFVHPKYGPVWSTS-HLGDGSISLIGTDPK 403 (543)
T ss_dssp TSCEEEEEEGG--GTEEEEEETTTTEEEEEEECSSSBC-------CTTCEEEEETTTEEEEEEE-BSSSSEEEEEECCTT
T ss_pred CCCEEEEEecC--CCeEEEEECCCCeEEEeeccCCCCC-------CCCCcccCCCCCccEEEec-cCCCceEEEEEeCCC
Confidence 46544444332 3478889999877643 33211111 01223333334 5554433 23568899999875
Q ss_pred ----CceeEEEEecCCCcceeeeEEeeCCEEEEEEc--------CCeEEEEeCCCCeEE
Q 036281 299 ----GFWIKHLTFGPFIETYQPLGFWRKDEFLLESS--------DKRVILYDSRYHEMR 345 (371)
Q Consensus 299 ----~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~--------~~~l~~yd~~~~~~~ 345 (371)
..|..+.++.-...-...+.++++|+.+.... +..+.+||.++.+..
T Consensus 404 ~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 404 NHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred CCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 23998888864432233456677887666632 458999999988743
No 97
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=54.17 E-value=1.2e+02 Score=29.80 Aligned_cols=121 Identities=9% Similarity=-0.004 Sum_probs=62.3
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCC--ceEEEeCCCCCCCCCcccc-cCCCcceEEEeCCeEEEEecCCCCCEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSN--EVFQEIKGPSVPQTTTYYQ-SVKTPWMLGTYDDCLSLLYSDKFAHSFE 292 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~--e~~~~i~~P~~~~~~~~~~-~~~~~~~L~~~~g~L~l~~~~~~~~~~~ 292 (371)
..++..+|.+|...... .|.++|..+ +.|+. ..+..... .... .......+...+|+|.+.. ....+.
T Consensus 64 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~v~v~~---~dg~l~ 134 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS----VVYALDARDGRLIWKY-DPQSDRHR-AGEACCDAVNRGVAVWKGKVYVGV---LDGRLE 134 (689)
T ss_dssp CCCEEETTEEEEECGGG----CEEEEETTTCCEEEEE-CCCCCGGG-GGGCTTCSCCCCCEEETTEEEEEC---TTSEEE
T ss_pred ecCEEECCEEEEEcCCC----eEEEEECCCCceeEEE-cCCCCccc-cccccccCCCCccEEECCEEEEEc---cCCEEE
Confidence 36688999999877654 799999876 45654 22211100 0000 0000112334567666643 223333
Q ss_pred EEEeeC--CceeEEEEecCCC--cc-eeeeEEeeCCEEEEEEc------CCeEEEEeCCCCeEEEE
Q 036281 293 LWIMKG--GFWIKHLTFGPFI--ET-YQPLGFWRKDEFLLESS------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 293 iW~L~~--~~W~~~~~i~~~~--~~-~~~~~~~~~~~il~~~~------~~~l~~yd~~~~~~~~v 347 (371)
-+-.+. ..|......++.. .+ ..|+. .++.+++... ++.++.||.+|++..+-
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRV--VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEE--ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 333222 4465543212111 11 23433 2667766532 46899999999987665
No 98
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=53.89 E-value=1e+02 Score=26.10 Aligned_cols=111 Identities=7% Similarity=-0.035 Sum_probs=58.7
Q ss_pred Cce-EEEEEecCCCCcEEEEEECC--CceEEEeC-CCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEe
Q 036281 222 NGY-CYWVVCRPDYSKAILAFSMS--NEVFQEIK-GPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIM 296 (371)
Q Consensus 222 ~G~-lywl~~~~~~~~~Il~fD~~--~e~~~~i~-~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L 296 (371)
+|. +|..... ...|..||+. +.++..+. ++.... ...+. .-+|+..++.. .....+.+|-+
T Consensus 48 dg~~l~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s~dg~~l~~~~-~~~~~i~~~d~ 113 (343)
T 1ri6_A 48 DKRYLYVGVRP---EFRVLAYRIAPDDGALTFAAESALPGS----------LTHISTDHQGQFVFVGS-YNAGNVSVTRL 113 (343)
T ss_dssp TSSEEEEEETT---TTEEEEEEECTTTCCEEEEEEEECSSC----------CSEEEECTTSSEEEEEE-TTTTEEEEEEE
T ss_pred CCCEEEEeecC---CCeEEEEEecCCCCceeeccccccCCC----------CcEEEEcCCCCEEEEEe-cCCCeEEEEEC
Confidence 455 5544433 2478887776 55655432 222111 11222 24565443332 34678999998
Q ss_pred eC-CceeEEEEecCCCcceeeeEEeeCCE-EEEEE-cCCeEEEEeCCC-CeEEEE
Q 036281 297 KG-GFWIKHLTFGPFIETYQPLGFWRKDE-FLLES-SDKRVILYDSRY-HEMRDL 347 (371)
Q Consensus 297 ~~-~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~-~~~~l~~yd~~~-~~~~~v 347 (371)
.+ ........+.... ....+.+..+|+ +++.. .++.+.+||+++ +++..+
T Consensus 114 ~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp ETTEEEEEEEEECCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred CCCccccccccccCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 54 2233333333222 233355666776 44444 577899999988 766543
No 99
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=52.02 E-value=1.9e+02 Score=28.68 Aligned_cols=211 Identities=7% Similarity=0.060 Sum_probs=101.7
Q ss_pred EEeeecceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 108 HIGPYDGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 108 ~~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
+....+|-|.+.....+ +++||.++++..+...+....... ......+..|.... +.+... .-
T Consensus 268 i~~d~~g~lWigt~~Gl-~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~i~~D~~g~----lWigt~----------~~ 330 (795)
T 4a2l_A 268 LAMDSQNRLWIGTFNDL-NIYHEGTDSFASYSSNPVENGSLS--QRSVRSIFMDSQGG----MWLGTY----------FG 330 (795)
T ss_dssp EEECTTSCEEEEESSCE-EEEETTTTEEEEECCCTTSTTSCS--SSCEEEEEECTTSC----EEEEES----------SS
T ss_pred EEEcCCCCEEEEeCChh-heEcCCCCeEEEEecCCCCCCCCC--CCcEEEEEEeCCcC----EEEEEC----------CC
Confidence 33444676766665577 889998888776654321111011 11223444444321 333221 23
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCC-CCC-CCccc
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPS-VPQ-TTTYY 263 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~-~~~-~~~~~ 263 (371)
.+..|+..++.++........-......-.+++. +|.+ |+...+ ..|..+|..+.+|..+..+. ... .
T Consensus 331 Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~---- 402 (795)
T 4a2l_A 331 GLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTND---GGLNLYNPITQRFTSYTLQEDESARG---- 402 (795)
T ss_dssp CEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESS---SCEEEECTTTCCEEEECCC------C----
T ss_pred CeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECC---CCeEEEcCCCCcEEEEecCCCCcccC----
Confidence 4556666555555442110000000001123333 3554 555432 37999999999998876432 100 0
Q ss_pred ccCCCcceEEE-eCCe-EEEEecCCCCCEEEEEEeeCCceeEEEEe-cC-C-CcceeeeEEeeCCEEEEEEcCCeEEEEe
Q 036281 264 QSVKTPWMLGT-YDDC-LSLLYSDKFAHSFELWIMKGGFWIKHLTF-GP-F-IETYQPLGFWRKDEFLLESSDKRVILYD 338 (371)
Q Consensus 264 ~~~~~~~~L~~-~~g~-L~l~~~~~~~~~~~iW~L~~~~W~~~~~i-~~-~-~~~~~~~~~~~~~~il~~~~~~~l~~yd 338 (371)
........+.+ .+|. |.+-. ....+.++-.+...+.. +.. .+ . .....-+....+|.|++... .+++.||
T Consensus 403 l~~~~v~~i~~d~~g~~lWigt---~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~ 477 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKSLVYIGT---HAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFN 477 (795)
T ss_dssp CSCSCEEEEEEETTTTEEEEEE---TTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEE
T ss_pred CCCccEEEEEEcCCCCEEEEEe---CcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEe
Confidence 00012334444 4677 77654 22344444333222222 111 11 1 11122233345778988876 6799999
Q ss_pred CCCCeEEEEE
Q 036281 339 SRYHEMRDLG 348 (371)
Q Consensus 339 ~~~~~~~~v~ 348 (371)
+++++++.+.
T Consensus 478 ~~~~~~~~~~ 487 (795)
T 4a2l_A 478 PEQRSFTTIE 487 (795)
T ss_dssp TTTTEEEECC
T ss_pred CCCCeEEEcc
Confidence 9999887663
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=52.00 E-value=1.2e+02 Score=26.43 Aligned_cols=181 Identities=14% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceee
Q 036281 122 HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRD 201 (371)
Q Consensus 122 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~ 201 (371)
..+ .++|+.+++....-.... . ..++.+++.. .+-++.. . ..-.+.+|+..++....
T Consensus 96 ~~v-~v~d~~~~~~~~~~~~~~--------~--~~~~~~s~dg-~~l~~~~----~-------~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 96 STL-SVIDTTSNTVAGTVKTGK--------S--PLGLALSPDG-KKLYVTN----N-------GDKTVSVINTVTKAVIN 152 (391)
T ss_dssp TEE-EEEETTTTEEEEEEECSS--------S--EEEEEECTTS-SEEEEEE----T-------TTTEEEEEETTTTEEEE
T ss_pred CEE-EEEECCCCeEEEEEeCCC--------C--cceEEECCCC-CEEEEEe----C-------CCCEEEEEECCCCcEEE
Confidence 445 999999987654322111 1 2455555543 3322221 1 13468888888765433
Q ss_pred cCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEEE-eCCeE
Q 036281 202 LKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLGT-YDDCL 279 (371)
Q Consensus 202 ~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L 279 (371)
.-... ..+.. -...-+|..-+.+... ...|..+|+.+.+... +.... ....+.. -+|+.
T Consensus 153 ~~~~~-~~~~~----~~~~~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~~------------~~~~~~~~~~g~~ 213 (391)
T 1l0q_A 153 TVSVG-RSPKG----IAVTPDGTKVYVANFD--SMSISVIDTVTNSVIDTVKVEA------------APSGIAVNPEGTK 213 (391)
T ss_dssp EEECC-SSEEE----EEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECSS------------EEEEEEECTTSSE
T ss_pred EEecC-CCcce----EEECCCCCEEEEEeCC--CCEEEEEECCCCeEEEEEecCC------------CccceEECCCCCE
Confidence 21110 01110 1112245433344332 3578899998876533 22111 1112222 34544
Q ss_pred EEEe-cCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEE-EE-EcCCeEEEEeCCCCeEEEE
Q 036281 280 SLLY-SDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFL-LE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 280 ~l~~-~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~-~~~~~l~~yd~~~~~~~~v 347 (371)
.++. .......+.+|-++.. .....+.... ...-+.+..+|+.+ +. ..++.+.+||+++++....
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN--KITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT--EEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEecCcCCCcEEEEECCCC--eEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEE
Confidence 4433 2225678888888652 3333443222 12335556677654 44 3478899999999886543
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=51.92 E-value=1.2e+02 Score=26.52 Aligned_cols=64 Identities=14% Similarity=0.047 Sum_probs=40.1
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCC-EEEEE-EcCCeEEEEeCCCCe
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKD-EFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~-~~~~~l~~yd~~~~~ 343 (371)
+|.+.+.. .....+.||-++. ......+..+.....-+.+.+++ .+++. ..++.+.+||+++.+
T Consensus 274 ~~~~l~s~--~~dg~v~~wd~~~--~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 274 DEHLLLSS--GRDNTVLLWNPES--AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp CSSCEEEE--ESSSEEEEECSSS--CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CCCeEEEE--eCCCCEEEeeCCC--CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 56655544 3567899998865 33444444333233345666666 56555 457889999998765
No 102
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=51.77 E-value=1.1e+02 Score=26.09 Aligned_cols=122 Identities=11% Similarity=0.059 Sum_probs=63.5
Q ss_pred ceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCC----------CcccccCCCcceEEEe--CCeEEEE
Q 036281 217 YNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQT----------TTYYQSVKTPWMLGTY--DDCLSLL 282 (371)
Q Consensus 217 ~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~----------~~~~~~~~~~~~L~~~--~g~L~l~ 282 (371)
.++.+ +|.++|.... ...|..||..+.++..+..+..... .... .......+..- +|.|.+.
T Consensus 22 ~~i~~d~~g~~l~v~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQ---DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRP-LCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp CCEECCTTCSSEEEECT---TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHH-HHCCEEEEEEETTTTEEEEE
T ss_pred eEEEEcCCCCEEEEEcC---CCeEEEECCCCCceEEEecccccccccccccccchhccc-cCCCCceEEEcCCCCcEEEE
Confidence 33444 5787887654 3579999998877776644321100 0000 00012234443 6888886
Q ss_pred ecCCCCCEEEEEEeeC--CceeEEEEecCCCcc--eeeeEEee-CCEEEEEEcC------------------CeEEEEeC
Q 036281 283 YSDKFAHSFELWIMKG--GFWIKHLTFGPFIET--YQPLGFWR-KDEFLLESSD------------------KRVILYDS 339 (371)
Q Consensus 283 ~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~--~~~~~~~~-~~~il~~~~~------------------~~l~~yd~ 339 (371)
.. ... |+.++- ............... ..-+.+.. +|.|++.... +.++.||+
T Consensus 98 d~---~~~--i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 98 DC---YYH--LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp ET---TTE--EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred EC---CCC--EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 52 133 444432 111111111011111 23356667 7889887532 57999999
Q ss_pred CCCeEEEE
Q 036281 340 RYHEMRDL 347 (371)
Q Consensus 340 ~~~~~~~v 347 (371)
++++++.+
T Consensus 173 ~~~~~~~~ 180 (322)
T 2fp8_A 173 STKETTLL 180 (322)
T ss_dssp TTTEEEEE
T ss_pred CCCEEEEe
Confidence 98887655
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=51.71 E-value=1e+02 Score=25.59 Aligned_cols=94 Identities=10% Similarity=0.091 Sum_probs=55.6
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|..+|+.+.+. ..+..... ....+.- -+|.|... .....+.||-++... ....+.....-
T Consensus 205 g~i~i~d~~~~~~~~~~~~~~~-----------~i~~~~~~~~~~l~~~---~~dg~v~iwd~~~~~--~~~~~~~~~~~ 268 (313)
T 3odt_A 205 GLIKLVDMHTGDVLRTYEGHES-----------FVYCIKLLPNGDIVSC---GEDRTVRIWSKENGS--LKQVITLPAIS 268 (313)
T ss_dssp SEEEEEETTTCCEEEEEECCSS-----------CEEEEEECTTSCEEEE---ETTSEEEEECTTTCC--EEEEEECSSSC
T ss_pred CeEEEEECCchhhhhhhhcCCc-----------eEEEEEEecCCCEEEE---ecCCEEEEEECCCCc--eeEEEeccCce
Confidence 4788999987543 23321111 1222333 34554433 357889999887632 23333333222
Q ss_pred eeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 314 YQPLGFWRKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 314 ~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
..-+.+..++.++....++.+.+||++++++.
T Consensus 269 i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 269 IWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEEESCGGGCC
T ss_pred EEEEEEccCCCEEEEeCCCcEEEEeCCCCcee
Confidence 34455667888777778899999999988753
No 104
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=50.80 E-value=77 Score=26.99 Aligned_cols=109 Identities=6% Similarity=-0.101 Sum_probs=57.2
Q ss_pred Cc-eEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEeeCC
Q 036281 222 NG-YCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGG 299 (371)
Q Consensus 222 ~G-~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~ 299 (371)
+| .+||..... ..|..+|.. .+.+.+..|... ...+. .-+|+|.+.. .....+.+|-.+ .
T Consensus 55 ~g~~l~~~d~~~---~~i~~~~~~-g~~~~~~~~~~~-----------~~gl~~d~dG~l~v~~--~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 55 AQRTLVWSDLVG---RRVLGWRED-GTVDVLLDATAF-----------TNGNAVDAQQRLVHCE--HGRRAITRSDAD-G 116 (305)
T ss_dssp GGTEEEEEETTT---TEEEEEETT-SCEEEEEESCSC-----------EEEEEECTTSCEEEEE--TTTTEEEEECTT-S
T ss_pred CCCEEEEEECCC---CEEEEEeCC-CCEEEEeCCCCc-----------cceeeECCCCCEEEEE--CCCCEEEEECCC-C
Confidence 45 488887543 578889984 445554433321 11222 2467766654 233455555443 2
Q ss_pred ceeEEEEecCCCcc--eeeeEEeeCCEEEEEE------------------cCCeEEEEeCCCCeEEEEE
Q 036281 300 FWIKHLTFGPFIET--YQPLGFWRKDEFLLES------------------SDKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 300 ~W~~~~~i~~~~~~--~~~~~~~~~~~il~~~------------------~~~~l~~yd~~~~~~~~v~ 348 (371)
.............. ..-+.+..+|.+++.. ....++.||+++++++.+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 32221111010001 2235666788888841 1357999999888877664
No 105
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=50.12 E-value=1.3e+02 Score=26.10 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=43.3
Q ss_pred CCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
+|.+.+.. ..+..+.||-+.. ..+.....+..+..-..-+.+.+++++++. ..++.+.+||.+++++..
T Consensus 116 ~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 116 SGNLLATC--SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp TSSEEEEE--ETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEE--ECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 56655544 3567899999987 455545555444323344555566765554 567788999988876543
No 106
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=49.54 E-value=1.2e+02 Score=25.78 Aligned_cols=123 Identities=8% Similarity=-0.058 Sum_probs=62.6
Q ss_pred EEECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEe
Q 036281 219 VYLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIM 296 (371)
Q Consensus 219 v~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L 296 (371)
+.-+|...|.+... ...|..+|+.+.+. ..++.+...... .........+.. -+|+..++........+.+|-+
T Consensus 96 ~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 96 INNTTQTLWFGNTV--NSAVTAIDAKTGEVKGRLVLDDRKRTE--EVRPLQPRELVADDATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp EETTTTEEEEEETT--TTEEEEEETTTCCEEEEEESCCCCCCS--SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEET
T ss_pred ECCCCCEEEEEecC--CCEEEEEeCCCCeeEEEEecCCCcccc--ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcC
Confidence 34456633333332 35899999988765 455554322110 000000112332 3555433332123556666655
Q ss_pred eCCceeEEEEecCCCcceeeeEEeeCCE-EEEEEcCCeEEEEeCCCCeEEEE
Q 036281 297 KGGFWIKHLTFGPFIETYQPLGFWRKDE-FLLESSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 297 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~-il~~~~~~~l~~yd~~~~~~~~v 347 (371)
+. ......+.........+.+..+|+ +++...++.+..||+++++....
T Consensus 172 ~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 172 GN--IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp TT--TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CC--CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 43 444445542221233456666665 55555678899999999886543
No 107
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=49.32 E-value=1.5e+02 Score=26.58 Aligned_cols=192 Identities=14% Similarity=0.055 Sum_probs=91.6
Q ss_pred eeecceEEEee-c-CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 110 GPYDGIFCLLK-S-HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 110 ~s~~GLl~~~~-~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
+..+|.|.+.+ . ..+ +.+++.++....+-..... ...|+++|+..+. ++..- . ...
T Consensus 124 d~~~~~ly~~D~~~~~I-~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~--lY~~d---~-------~~~ 181 (386)
T 3v65_B 124 HHRRELVFWSDVTLDRI-LRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDK--LYWTD---S-------GTS 181 (386)
T ss_dssp ETTTTEEEEEETTTTEE-EEEETTSCCEEEEECSSCS---------CCCCEEEETTTTE--EEEEE---T-------TTT
T ss_pred ecCCCeEEEEeCCCCcE-EEEecCCCCcEEEEeCCCC---------CccEEEEEeCCCe--EEEEc---C-------CCC
Confidence 34567776665 2 344 7788877654433222111 1146666655443 22211 0 033
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccc
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQ 264 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~ 264 (371)
.+++++..+..-+.+... .+. ...++.+ +|.+||..... ...|..+|+....-..+-. ....
T Consensus 182 ~I~~~~~dg~~~~~l~~~--~l~----~P~giavdp~~g~ly~td~~~--~~~I~r~~~dG~~~~~~~~-~~~~------ 246 (386)
T 3v65_B 182 RIEVANLDGAHRKVLLWQ--SLE----KPRAIALHPMEGTIYWTDWGN--TPRIEASSMDGSGRRIIAD-THLF------ 246 (386)
T ss_dssp EEEECBTTSCSCEEEECS--SCS----CEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEEEEC-SSCS------
T ss_pred eEEEEeCCCCceEEeecC--CCC----CCcEEEEEcCCCeEEEeccCC--CCEEEEEeCCCCCcEEEEE-CCCC------
Confidence 566666654332222110 110 1133433 58999987543 3689999987654433311 1111
Q ss_pred cCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEe-eCCEEEEEE-cCCeEEEEeCC
Q 036281 265 SVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFW-RKDEFLLES-SDKRVILYDSR 340 (371)
Q Consensus 265 ~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~-~~~~l~~yd~~ 340 (371)
...-|+. .+|+|++... ....|...-++. .-.+.. +. ..+..|.++. .++.+++.. ..+.+..+|..
T Consensus 247 ---~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG-~~~~~~-~~--~~~~~P~giav~~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 247 ---WPNGLTIDYAGRRMYWVDA--KHHVIERANLDG-SHRKAV-IS--QGLPHPFAITVFEDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp ---CEEEEEEEGGGTEEEEEET--TTTEEEEECTTS-CSCEEE-EC--SSCSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---CeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCC-CeeEEE-EE--CCCCCceEEEEECCEEEEeeCCCCeEEEEECC
Confidence 1122343 4778877652 444444433332 111111 11 1234555443 355677764 46789999955
Q ss_pred CCe-EEEE
Q 036281 341 YHE-MRDL 347 (371)
Q Consensus 341 ~~~-~~~v 347 (371)
+++ .+.+
T Consensus 318 ~G~~~~~i 325 (386)
T 3v65_B 318 TGKNQEII 325 (386)
T ss_dssp TCCSCEEE
T ss_pred CCcceEEE
Confidence 544 4444
No 108
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=49.20 E-value=1.3e+02 Score=25.94 Aligned_cols=104 Identities=9% Similarity=0.049 Sum_probs=57.8
Q ss_pred ceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEeeCCce
Q 036281 223 GYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGGFW 301 (371)
Q Consensus 223 G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~~W 301 (371)
|.+||..... ..|..+|..+.+...+..|.. ...+. .-+|++.+... ..+.+|-.+....
T Consensus 61 ~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~------------v~~i~~~~dg~l~v~~~----~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 61 GTAWWFNILE---RELHELHLASGRKTVHALPFM------------GSALAKISDSKQLIASD----DGLFLRDTATGVL 121 (326)
T ss_dssp TEEEEEEGGG---TEEEEEETTTTEEEEEECSSC------------EEEEEEEETTEEEEEET----TEEEEEETTTCCE
T ss_pred CEEEEEECCC---CEEEEEECCCCcEEEEECCCc------------ceEEEEeCCCeEEEEEC----CCEEEEECCCCcE
Confidence 7899987543 479999999888777665532 12222 35788776541 2333333323333
Q ss_pred eEEEEecCCCc--ceeeeEEeeCCEEEEEEc-------CCeEEEEeCCCCeEEEE
Q 036281 302 IKHLTFGPFIE--TYQPLGFWRKDEFLLESS-------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 302 ~~~~~i~~~~~--~~~~~~~~~~~~il~~~~-------~~~l~~yd~~~~~~~~v 347 (371)
........... ...-+.+..+|.+++... ...++.|| +++++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 32222111111 123345566788877642 25788888 5666554
No 109
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=49.15 E-value=1.2e+02 Score=25.60 Aligned_cols=101 Identities=6% Similarity=-0.106 Sum_probs=56.1
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF 300 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~ 300 (371)
+|.+||..... ..|..+|..+.+...+..|... ..+.. -+|+|.+.. ...+.+|-.+...
T Consensus 24 ~~~l~~~d~~~---~~i~~~d~~~~~~~~~~~~~~~------------~~i~~~~dG~l~v~~----~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 24 SNSLLFVDIPA---KKVCRWDSFTKQVQRVTMDAPV------------SSVALRQSGGYVATI----GTKFCALNWKEQS 84 (297)
T ss_dssp TTEEEEEETTT---TEEEEEETTTCCEEEEECSSCE------------EEEEEBTTSSEEEEE----TTEEEEEETTTTE
T ss_pred CCEEEEEECCC---CEEEEEECCCCcEEEEeCCCce------------EEEEECCCCCEEEEE----CCeEEEEECCCCc
Confidence 47899987543 5899999998877766655321 12332 456655533 2344444443344
Q ss_pred eeEEEEecCCCcce--eeeEEeeCCEEEEEE------------cCCeEEEEeCCC
Q 036281 301 WIKHLTFGPFIETY--QPLGFWRKDEFLLES------------SDKRVILYDSRY 341 (371)
Q Consensus 301 W~~~~~i~~~~~~~--~~~~~~~~~~il~~~------------~~~~l~~yd~~~ 341 (371)
+............. .-+.+..+|++++.. ....++.+|...
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 44333332111122 234556678887764 124688888764
No 110
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=48.76 E-value=19 Score=26.38 Aligned_cols=39 Identities=8% Similarity=0.147 Sum_probs=27.8
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEe
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLIL 173 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 173 (371)
++.+|.|++|. |..... ....+.+..|...+.|+|+...
T Consensus 14 ~~~d~~~~~W~--p~~~~~-------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 14 MVYDDANKKWV--PAGGST-------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEETTTTEEE--EGGGCC-------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCceE--ECCCCC-------CceEEEEEEECCCCEEEEEEEE
Confidence 89999999765 444211 2344778888888899999874
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=48.73 E-value=1.2e+02 Score=25.35 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=20.7
Q ss_pred eecceEEEeecCCceEEEeccccccccC
Q 036281 111 PYDGIFCLLKSHTLINLWNVSLNEYRGL 138 (371)
Q Consensus 111 s~~GLl~~~~~~~~~~V~NP~T~~~~~L 138 (371)
|.+|+|....+..+ .|||..|++...+
T Consensus 34 S~~~~lAvg~D~tV-~iWd~~tg~~~~~ 60 (318)
T 4ggc_A 34 SSGNVLAVALDNSV-YLWSASSGDILQL 60 (318)
T ss_dssp CTTSEEEEEETTEE-EEEETTTCCEEEE
T ss_pred CCCCEEEEEeCCEE-EEEECCCCCEEEE
Confidence 56787776667777 9999999986643
No 112
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=48.41 E-value=1.4e+02 Score=26.09 Aligned_cols=97 Identities=15% Similarity=0.169 Sum_probs=53.6
Q ss_pred cEEEEEECCCceEE-EeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVFQ-EIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|..+|+.+.+.. .+.... . ....+.. -+|.+.+.. .....+.||-+... .....+......
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~--~---------~i~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~--~~~~~~~~~~~~ 291 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH--G---------PISVLEFNDTNKLLLSA--SDDGTLRIWHGGNG--NSQNCFYGHSQS 291 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS--S---------CEEEEEEETTTTEEEEE--ETTSCEEEECSSSB--SCSEEECCCSSC
T ss_pred CeEEEEEcCCCceeeeeccCC--C---------ceEEEEECCCCCEEEEE--cCCCEEEEEECCCC--ccceEecCCCcc
Confidence 47888998875432 222110 0 1222332 355544444 35678999988752 222333333323
Q ss_pred eeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEE
Q 036281 314 YQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 314 ~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v 347 (371)
..-+.+.+++.++....++.+.+||+++++....
T Consensus 292 i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 292 IVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 3445556677555556788999999998875443
No 113
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=48.40 E-value=1.3e+02 Score=25.60 Aligned_cols=108 Identities=5% Similarity=-0.062 Sum_probs=54.7
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEeeCC
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGG 299 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~ 299 (371)
+|.+|..... ...|..+|+.+.+. ..+..+..... ..+. .-+|+..++.. .....+.+|-++..
T Consensus 10 ~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~----------~~~~~s~dg~~~~v~~-~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 10 GHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFGP----------GTAMMAPDNRTAYVLN-NHYGDIYGIDLDTC 75 (349)
T ss_dssp TCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCSS----------CEEEECTTSSEEEEEE-TTTTEEEEEETTTT
T ss_pred CCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCCC----------ceeEECCCCCEEEEEe-CCCCcEEEEeCCCC
Confidence 4454444433 35899999988765 34555541111 1222 24565333332 34567777776543
Q ss_pred ceeEEEEecCCC----cceeeeEEeeCCEEEEE-Ec------------CCeEEEEeCCCCe
Q 036281 300 FWIKHLTFGPFI----ETYQPLGFWRKDEFLLE-SS------------DKRVILYDSRYHE 343 (371)
Q Consensus 300 ~W~~~~~i~~~~----~~~~~~~~~~~~~il~~-~~------------~~~l~~yd~~~~~ 343 (371)
.-.....+...+ .....+.+.++|+.++. .. ...+.+||+++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 222222221110 01223556667765444 32 3789999998743
No 114
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=46.99 E-value=1.5e+02 Score=26.04 Aligned_cols=188 Identities=9% Similarity=0.003 Sum_probs=90.6
Q ss_pred cceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEE
Q 036281 113 DGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVY 192 (371)
Q Consensus 113 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (371)
.+.|++.....+ ...++.+.+...+-... ....++.+|+..+. ++..- . ..-.+..+
T Consensus 44 ~~~ll~~~~~~I-~~i~~~g~~~~~~~~~~----------~~~~~l~~d~~~~~--ly~~D---~-------~~~~I~r~ 100 (349)
T 3v64_C 44 EPVLLFANRIDI-RQVLPHRSEYTLLLNNL----------ENAIALDFHHRREL--VFWSD---V-------TLDRILRA 100 (349)
T ss_dssp CCEEEEECBSCE-EEECTTSCCEEEEECSC----------SCEEEEEEETTTTE--EEEEE---T-------TTTEEEEE
T ss_pred CceeEeecccce-EEEeCCCCeeEEeecCC----------CceEEEEEeccccE--EEEEe---c-------cCCceEEE
Confidence 455666665555 67777665544332111 12377888865543 22221 1 03355666
Q ss_pred EcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCc
Q 036281 193 NFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTP 269 (371)
Q Consensus 193 ~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~ 269 (371)
+..+..-+.+... .+. ...++.+ +|.+||..... ..|..+|+....-..+. ..... ..
T Consensus 101 ~~~g~~~~~~~~~--~~~----~p~glavd~~~g~ly~~d~~~---~~I~~~~~dG~~~~~l~-~~~l~---------~P 161 (349)
T 3v64_C 101 NLNGSNVEEVVST--GLE----SPGGLAVDWVHDKLYWTDSGT---SRIEVANLDGAHRKVLL-WQSLE---------KP 161 (349)
T ss_dssp ETTSCSCEEEECS--SCS----CCCEEEEETTTTEEEEEETTT---TEEEEEETTSCSCEEEE-CTTCS---------CE
T ss_pred ecCCCCceEEEeC--CCC----CccEEEEecCCCeEEEEcCCC---CeEEEEcCCCCceEEEE-eCCCC---------Cc
Confidence 6666543332111 110 1133443 68999987653 58999998865433332 11111 11
Q ss_pred ceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceee--eEEe-eCCEEEEEE-cCCeEEEEeCCCCe
Q 036281 270 WMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQP--LGFW-RKDEFLLES-SDKRVILYDSRYHE 343 (371)
Q Consensus 270 ~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~--~~~~-~~~~il~~~-~~~~l~~yd~~~~~ 343 (371)
..++. .+|.|+.... .....|...-++. .-. ..+. ...+..| +++. .++.|++.. ....+..+|+....
T Consensus 162 ~~iavdp~~g~ly~td~-~~~~~I~r~~~dG-~~~--~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDW-GNTPRIEASSMDG-SGR--RIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp EEEEEETTTTEEEEEEC-SSSCEEEEEETTS-CSC--EESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ceEEEecCcCeEEEecc-CCCCEEEEEeCCC-CCc--EEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 22333 3677766542 1124443333332 111 1111 1224444 4444 356677764 35678888887654
Q ss_pred EEEE
Q 036281 344 MRDL 347 (371)
Q Consensus 344 ~~~v 347 (371)
.+.+
T Consensus 237 ~~~~ 240 (349)
T 3v64_C 237 RKAV 240 (349)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
No 115
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=46.70 E-value=1.1e+02 Score=26.10 Aligned_cols=65 Identities=20% Similarity=0.209 Sum_probs=41.1
Q ss_pred eEEEEecCCCCCEEEEEEeeC--Cce-eEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 278 CLSLLYSDKFAHSFELWIMKG--GFW-IKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 278 ~L~l~~~~~~~~~~~iW~L~~--~~W-~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
.+.+.. ..+..+.+|-+.. ... .....+..+.....-+.+..+|..++. ..++.+.+||+++++.
T Consensus 31 ~~l~s~--s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~ 99 (319)
T 3frx_A 31 NLLLSA--SRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGET 99 (319)
T ss_dssp TEEEEE--ETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEe--cCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCe
Confidence 454444 3678999999875 222 223333333333445566677776665 5688899999998875
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=46.41 E-value=1.4e+02 Score=25.46 Aligned_cols=60 Identities=13% Similarity=0.115 Sum_probs=34.9
Q ss_pred CCCCEEEEEEeeC-CceeEEEEecCCCc------------ceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 286 KFAHSFELWIMKG-GFWIKHLTFGPFIE------------TYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 286 ~~~~~~~iW~L~~-~~W~~~~~i~~~~~------------~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
.....+.||-+.. ..-.....+..... -..-+.+.+++.+++. ..++.+.+||+++++..
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 3678899999886 21111222221110 1223455567765555 56788999999988653
No 117
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.15 E-value=2.3e+02 Score=28.01 Aligned_cols=211 Identities=9% Similarity=0.056 Sum_probs=104.8
Q ss_pred EEeeecceEEEee-cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCc
Q 036281 108 HIGPYDGIFCLLK-SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDF 186 (371)
Q Consensus 108 ~~~s~~GLl~~~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~ 186 (371)
+....+|-+.+.. ...+ +.+||.++++.............. ......+..|+.. . +.+... .
T Consensus 220 i~~d~~g~lwigt~~~Gl-~~~~~~~~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g-~---lWigt~----------~ 282 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGL-FLINPKTKEIKNYLHSPSNPKSIS--SNYIRSLAMDSQN-R---LWIGTF----------N 282 (795)
T ss_dssp EEEEETTEEEEEEBSSCE-EEEETTTTEEEEECCCTTCTTSCS--CSBEEEEEECTTS-C---EEEEES----------S
T ss_pred EEEcCCCCEEEEECCCCe-EEEeCCCCeEEEeecCCCCccccC--CCeEEEEEEcCCC-C---EEEEeC----------C
Confidence 4444567776665 4577 999999988776543321000000 1112334444321 1 333220 2
Q ss_pred ceEEEEEcCCCceeecCccccc-cceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccc
Q 036281 187 SHVAVYNFSTNSWRDLKGFEMR-FDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYY 263 (371)
Q Consensus 187 ~~~~vy~~~~~~Wr~~~~~~~~-~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~ 263 (371)
.+.+|+..++.++........ .......-.+++. +|.+ |+.... ..|..+|..+..|..+........
T Consensus 283 -Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~---- 353 (795)
T 4a2l_A 283 -DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTYF---GGLNYYHPIRNRFKNIRNIPYKNS---- 353 (795)
T ss_dssp -CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEESS---SCEEEECGGGGSSEEECCCTTSSS----
T ss_pred -hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEECC---CCeEEeCCCcccceEEcCCCCCCC----
Confidence 577888888888765321000 0000001123333 3554 555432 379999999988887754221111
Q ss_pred ccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC-------CCcceeeeEEeeCCE-EEEEEcCCeE
Q 036281 264 QSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP-------FIETYQPLGFWRKDE-FLLESSDKRV 334 (371)
Q Consensus 264 ~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~-------~~~~~~~~~~~~~~~-il~~~~~~~l 334 (371)
........+.+ .+|.|.+-. ....+..|-.+...+.... ..+ ......-+....+|. |++...+.+|
T Consensus 354 l~~~~V~~i~~d~~g~lWiGt---~~~Gl~~~~~~~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 354 LSDNVVSCIVEDKDKNLWIGT---NDGGLNLYNPITQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGL 429 (795)
T ss_dssp CSCSSEEEEEECTTSCEEEEE---SSSCEEEECTTTCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CCCCeeEEEEECCCCCEEEEE---CCCCeEEEcCCCCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCce
Confidence 00112233443 456777644 2233444433222332211 111 011223344455788 8888777889
Q ss_pred EEEeCCCCeEEEEE
Q 036281 335 ILYDSRYHEMRDLG 348 (371)
Q Consensus 335 ~~yd~~~~~~~~v~ 348 (371)
..||.++++++.+.
T Consensus 430 ~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 430 SILHRNSGQVENFN 443 (795)
T ss_dssp EEEETTTCCEEEEC
T ss_pred eEEeCCCCcEEEee
Confidence 99999998887663
No 118
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=44.89 E-value=1.3e+02 Score=26.39 Aligned_cols=69 Identities=16% Similarity=0.099 Sum_probs=39.1
Q ss_pred EEEeCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEec------CCCcceeeeEEeeCCE----EEEEEcCCeEEEEeCC
Q 036281 272 LGTYDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFG------PFIETYQPLGFWRKDE----FLLESSDKRVILYDSR 340 (371)
Q Consensus 272 L~~~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~------~~~~~~~~~~~~~~~~----il~~~~~~~l~~yd~~ 340 (371)
+...+|.+.+.. .....+.||-+.+ ..-.....+. .......-+++..++. ++.....+.+..|+++
T Consensus 341 ~~~~~~~~l~s~--~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 341 VYFAAGALFVSS--GFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEEETTEEEEEE--TTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred EEeCCCCEEEEe--cCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 444567755544 4678999999987 1111111111 1111223345555555 7777778889999987
Q ss_pred CC
Q 036281 341 YH 342 (371)
Q Consensus 341 ~~ 342 (371)
.+
T Consensus 419 ~~ 420 (420)
T 3vl1_A 419 NP 420 (420)
T ss_dssp C-
T ss_pred CC
Confidence 53
No 119
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=44.54 E-value=29 Score=25.50 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=28.3
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEe
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLIL 173 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 173 (371)
++++|.|++|. |..... . ....+.+..|...+.|+|+...
T Consensus 14 ~~~d~~~~~W~--p~~~g~-----~-gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 14 MLYDDGNKRWL--PAGTGP-----Q-AFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp BEECTTTSSCC--BSSCSC-----C-CCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCcee--ECCCCC-----C-CccEEEEEEeCCCCEEEEEEEE
Confidence 88999999965 544310 0 2334788889888899999875
No 120
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=43.89 E-value=1.2e+02 Score=26.03 Aligned_cols=61 Identities=10% Similarity=0.086 Sum_probs=37.9
Q ss_pred CCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 287 FAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 287 ~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
.+..+.||-+.+ ..+.....+..+..-..-+.+.+++.+++. ..++.+.+||..++.++.+
T Consensus 127 ~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~ 190 (330)
T 2hes_X 127 RDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECV 190 (330)
T ss_dssp TTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEE
Confidence 567889998854 455555555444333344555566666555 4577888898877755443
No 121
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=43.72 E-value=1.5e+02 Score=25.19 Aligned_cols=63 Identities=14% Similarity=0.125 Sum_probs=38.1
Q ss_pred CeEEEEecCCCCCEEEEEEeeC-Cc-eeEEEEecCC--CcceeeeEEeeCCEEEEE-EcCCeEEEEeCCC
Q 036281 277 DCLSLLYSDKFAHSFELWIMKG-GF-WIKHLTFGPF--IETYQPLGFWRKDEFLLE-SSDKRVILYDSRY 341 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~-~~-W~~~~~i~~~--~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~ 341 (371)
|.+.+.. .....+.||-++. .. ......+... .....-+.+..++++++. ..++.+.+||+.+
T Consensus 299 ~~~l~~~--~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALG--NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEE--CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEE--ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 6655544 4667899999987 22 2233444333 223444566667776665 5678999999864
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=43.53 E-value=1.6e+02 Score=25.26 Aligned_cols=60 Identities=8% Similarity=0.038 Sum_probs=37.5
Q ss_pred CCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 286 KFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 286 ~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
..+..+.||-+.+........+..+..-..-+.+..++.+++. ..++.+.+||+++++..
T Consensus 55 s~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~ 115 (321)
T 3ow8_A 55 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI 115 (321)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEE
Confidence 3678899999887444444444433322333445556665554 56788999999887643
No 123
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=42.79 E-value=16 Score=21.83 Aligned_cols=19 Identities=26% Similarity=0.302 Sum_probs=13.8
Q ss_pred ccCCCCCHHHHHHHHhcCC
Q 036281 8 KTLGDLSDDMMIETLSRLP 26 (371)
Q Consensus 8 ~~~~~LP~dll~~IL~rLP 26 (371)
+-...||.||-+|||+--.
T Consensus 19 eVF~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 19 EVFKQLPADIQEEILSGKS 37 (48)
T ss_dssp GGTTTSCHHHHHHHTTCCC
T ss_pred HHHHHCcHHHHHHHHhcch
Confidence 3356788888888887544
No 124
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=41.71 E-value=1.6e+02 Score=24.75 Aligned_cols=64 Identities=13% Similarity=0.243 Sum_probs=40.2
Q ss_pred CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeC--CEEE-EEEcCCeEEEEeCCCC
Q 036281 277 DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRK--DEFL-LESSDKRVILYDSRYH 342 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~--~~il-~~~~~~~l~~yd~~~~ 342 (371)
|.+.+.. ..+..+.||-++...|.....+..+..-..-+.+.++ |.++ ....++.+.+||++++
T Consensus 67 g~~l~s~--s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASC--SYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEE--ETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CCEEEEE--cCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 5555544 3678999999987666665555433323334455443 4444 4467888999998765
No 125
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=41.68 E-value=1.8e+02 Score=25.37 Aligned_cols=53 Identities=4% Similarity=-0.162 Sum_probs=30.6
Q ss_pred CCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEE-EcCCeEEEEeCCCC
Q 036281 287 FAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLE-SSDKRVILYDSRYH 342 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~-~~~~~l~~yd~~~~ 342 (371)
.+..+.||-++.. ... +...+.....-+++.+ ++.+|+. ..++.+.+||+.++
T Consensus 290 ~D~~i~iwd~~~~--~~~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 290 EDCTVAVLDADFS--EVF-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEECTTSC--EEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEECCCC--cEe-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 5678999976542 222 2222333344455554 6666554 56889999998654
No 126
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=41.55 E-value=1.7e+02 Score=25.11 Aligned_cols=67 Identities=7% Similarity=-0.062 Sum_probs=39.9
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
+|.+.+.. .....+.||-++...-..... .....-..-+.+.++|.++.. ..++.+.+||+++++..
T Consensus 138 ~~~~l~s~--s~dg~i~~wd~~~~~~~~~~~-~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 138 NTEYFIWA--DNRGTIGFQSYEDDSQYIVHS-AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp -CCEEEEE--ETTCCEEEEESSSSCEEEEEC-CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CCCEEEEE--eCCCcEEEEECCCCcEEEEEe-cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 45555534 356788999987622111111 112212344566678887776 56788999999988754
No 127
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=41.22 E-value=1.5e+02 Score=24.41 Aligned_cols=193 Identities=11% Similarity=0.029 Sum_probs=93.0
Q ss_pred eeecceEEEeec--CCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 110 GPYDGIFCLLKS--HTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 110 ~s~~GLl~~~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
+..+|.|.+.+. ..+ .++++.++....+-.... ....++.+|+..+. ++... . ...
T Consensus 44 d~~~~~ly~~d~~~~~I-~~~~~~g~~~~~~~~~~~---------~~p~~ia~d~~~~~--lyv~d---~-------~~~ 101 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSI-GRASLHGGEPTTIIRQDL---------GSPEGIALDHLGRT--IFWTD---S-------QLD 101 (267)
T ss_dssp ETTTTEEEEEETTTTEE-EEEESSSCCCEEEECTTC---------CCEEEEEEETTTTE--EEEEE---T-------TTT
T ss_pred ecCCCEEEEEECCCCEE-EEEecCCCCcEEEEECCC---------CCccEEEEEecCCe--EEEEE---C-------CCC
Confidence 334666666652 344 888887665332211110 12256777765432 22211 1 134
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccc
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQ 264 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~ 264 (371)
.+.+++..+..-+.+... .+ ....++.+ +|.+||..... ....|..+++.......+.. ....
T Consensus 102 ~I~~~~~~g~~~~~~~~~--~~----~~P~~i~vd~~~g~lyv~~~~~-~~~~I~~~~~dg~~~~~~~~-~~~~------ 167 (267)
T 1npe_A 102 RIEVAKMDGTQRRVLFDT--GL----VNPRGIVTDPVRGNLYWTDWNR-DNPKIETSHMDGTNRRILAQ-DNLG------ 167 (267)
T ss_dssp EEEEEETTSCSCEEEECS--SC----SSEEEEEEETTTTEEEEEECCS-SSCEEEEEETTSCCCEEEEC-TTCS------
T ss_pred EEEEEEcCCCCEEEEEEC--CC----CCccEEEEeeCCCEEEEEECCC-CCcEEEEEecCCCCcEEEEE-CCCC------
Confidence 567777765432222111 10 11133433 58999987541 12478888887654443321 1111
Q ss_pred cCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEEE-cCCeEEEEeCC
Q 036281 265 SVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLES-SDKRVILYDSR 340 (371)
Q Consensus 265 ~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~ 340 (371)
....+.. -++.|++... ....+.+.-++. . .....+. ....|.++.. ++.+++.. ..+.+..+|++
T Consensus 168 ---~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g-~-~~~~~~~---~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 168 ---LPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQ-P-GRRKVLE---GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ---CEEEEEEETTTTEEEEEET--TTTEEEEEETTE-E-EEEEEEE---CCCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---CCcEEEEcCCCCEEEEEEC--CCCEEEEEecCC-C-ceEEEec---CCCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 1122332 2567777653 344444443322 1 1111111 1334544433 56677765 35789999999
Q ss_pred CCeE-EEEE
Q 036281 341 YHEM-RDLG 348 (371)
Q Consensus 341 ~~~~-~~v~ 348 (371)
+++. +.+.
T Consensus 238 ~g~~~~~i~ 246 (267)
T 1npe_A 238 ISKEMDTFH 246 (267)
T ss_dssp TTEEEEEEC
T ss_pred CCCceEEEc
Confidence 8765 4443
No 128
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=40.94 E-value=2.9e+02 Score=27.67 Aligned_cols=114 Identities=7% Similarity=-0.031 Sum_probs=59.5
Q ss_pred ceEEEC---ceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEE
Q 036281 217 YNVYLN---GYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSF 291 (371)
Q Consensus 217 ~~v~~~---G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~ 291 (371)
.++.++ |.|||.... ...|.++|+....-..+-. .... ....|++ .+|.|+.... .....|
T Consensus 474 ~GLAvD~~~~~LY~tD~~---~~~I~v~~ldG~~~~~l~~-~~l~---------~P~gIaVDp~~g~LYwtD~-g~~~~I 539 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV---LGTVSVADTKGVKRKTLFR-ENGS---------KPRAIVVDPVHGFMYWTDW-GTPAKI 539 (791)
T ss_dssp CEEEEETTTTEEEEEETT---TTEEEEEETTSSSEEEEEE-CTTC---------CEEEEEEETTTTEEEEEEC-SSSCEE
T ss_pred ceeeeeecCCcEEEEecC---CCeEEEEeCCCCeEEEEEe-CCCC---------CcceEEEecCCCCEEEecC-CCCCeE
Confidence 445554 699998765 3589999998765444321 1111 1223443 4677777542 122344
Q ss_pred EEEEeeCCceeEEEEecCCCcceeeeEE--e-eCCEEEEEE-cCCeEEEEeCCCCeEEEEE
Q 036281 292 ELWIMKGGFWIKHLTFGPFIETYQPLGF--W-RKDEFLLES-SDKRVILYDSRYHEMRDLG 348 (371)
Q Consensus 292 ~iW~L~~~~W~~~~~i~~~~~~~~~~~~--~-~~~~il~~~-~~~~l~~yd~~~~~~~~v~ 348 (371)
.+--|+. +-. ..+.. ..+..|.++ . .++.|++.. ....|..+|+..+..+.+.
T Consensus 540 ~~~~~dG-~~~--~~lv~-~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 540 KKGGLNG-VDI--YSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp EEEETTS-CCE--EEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred EEEecCC-Cce--EEEEe-CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 3333332 211 11111 224555443 3 356677764 3567888888766655553
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=40.54 E-value=1.7e+02 Score=24.72 Aligned_cols=111 Identities=9% Similarity=0.052 Sum_probs=58.8
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceE----EEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEe
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVF----QEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIM 296 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~----~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L 296 (371)
+|...+.+... ...|..+|+.+.+. ..++... . ...+. .-+|+..++.. .....+.+|-+
T Consensus 186 dg~~l~v~~~~--~~~v~v~d~~~~~~~~~~~~~~~~~--~----------~~~~~~spdg~~l~v~~-~~~~~i~~~d~ 250 (331)
T 3u4y_A 186 DGNFAFVANLI--GNSIGILETQNPENITLLNAVGTNN--L----------PGTIVVSRDGSTVYVLT-ESTVDVFNFNQ 250 (331)
T ss_dssp TSSEEEEEETT--TTEEEEEECSSTTSCEEEEEEECSS--C----------CCCEEECTTSSEEEEEC-SSEEEEEEEET
T ss_pred CCCEEEEEeCC--CCeEEEEECCCCcccceeeeccCCC--C----------CceEEECCCCCEEEEEE-cCCCEEEEEEC
Confidence 57644444332 35789999987653 3333221 1 11222 24666433332 24456777766
Q ss_pred eCCceeEEEEecCC----Cc---ceeeeEEeeCCEEE-EEEc-CCeEEEEeCCCCeEEEE
Q 036281 297 KGGFWIKHLTFGPF----IE---TYQPLGFWRKDEFL-LESS-DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 297 ~~~~W~~~~~i~~~----~~---~~~~~~~~~~~~il-~~~~-~~~l~~yd~~~~~~~~v 347 (371)
+.........+... +. ....+.+..+|+.+ +... ++.+.+||++++....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 251 LSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp TTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred CCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 65333333333211 11 11336777788754 4443 56899999999887765
No 130
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=39.91 E-value=24 Score=31.05 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=38.3
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCe
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 343 (371)
+|++.+.. .....+.||-++...|.....+..+..-..-+.+.+++++++. ..++.+.+||+++++
T Consensus 22 ~g~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTT--TATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECC--CSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred CCCEEEEe--cCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 45544433 3567899999987666665555444333344556667765554 567889999999876
No 131
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=39.69 E-value=1.7e+02 Score=24.74 Aligned_cols=56 Identities=14% Similarity=0.249 Sum_probs=35.7
Q ss_pred CCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEeeCC----EEEE-EEcCCeEEEEeCCC
Q 036281 286 KFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFWRKD----EFLL-ESSDKRVILYDSRY 341 (371)
Q Consensus 286 ~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~~----~il~-~~~~~~l~~yd~~~ 341 (371)
..+..+.||-++. ..|.....+..+.....-+.+.+++ .+++ ...++.+.+||+++
T Consensus 186 s~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 186 GCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4678899999975 5677666554443333344444443 4444 46688899999876
No 132
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=39.50 E-value=1.7e+02 Score=24.63 Aligned_cols=98 Identities=9% Similarity=-0.030 Sum_probs=53.9
Q ss_pred cEEEEEECCC-ce--EEEeCCCCCCCCCcccccCCCcceEEEe--CCeEEEEecCCCCCEEEEEEeeCC--c--eeEEEE
Q 036281 236 KAILAFSMSN-EV--FQEIKGPSVPQTTTYYQSVKTPWMLGTY--DDCLSLLYSDKFAHSFELWIMKGG--F--WIKHLT 306 (371)
Q Consensus 236 ~~Il~fD~~~-e~--~~~i~~P~~~~~~~~~~~~~~~~~L~~~--~g~L~l~~~~~~~~~~~iW~L~~~--~--W~~~~~ 306 (371)
..|..+|+.+ .. ......+... ....+... +|.+.+.. .....+.||.++.. . ......
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~----------~i~~i~~~~~~~~~l~~~--~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKY----------QIRDVALLPKEQEGYACS--SIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSS----------CEEEEEECSGGGCEEEEE--ETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred CeEEEEECCccccccceeeecCCCC----------ceeEEEECCCCCCEEEEE--ecCCcEEEEEEcCCCccccccccee
Confidence 4788899887 32 3333222211 12223332 45655554 35778999998652 1 233333
Q ss_pred ecCCCc---------ceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 307 FGPFIE---------TYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 307 i~~~~~---------~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
+..... -..-+.+.+++.+++. ..++.+.+||+++++..
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 332211 2333455667775554 56788999999988753
No 133
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=38.95 E-value=1.5e+02 Score=25.18 Aligned_cols=68 Identities=13% Similarity=0.060 Sum_probs=39.7
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
+|++.+.. .....+.||-+.. ......+..+..-..-+.+..+++.++. ..++.+.+||+++++....
T Consensus 43 ~~~~l~~~--~~dg~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 43 EGDLLFSC--SKDSSASVWYSLN--GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp TSCEEEEE--ESSSCEEEEETTT--CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEE--eCCCEEEEEeCCC--chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 44444433 2456788888765 2333444433323344555566665554 5678899999998875433
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=38.54 E-value=1.7e+02 Score=24.42 Aligned_cols=95 Identities=7% Similarity=-0.067 Sum_probs=0.0
Q ss_pred EEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceee
Q 036281 237 AILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQP 316 (371)
Q Consensus 237 ~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~ 316 (371)
.|..+|+.+.+...+..+..... ....-..-+|+..++. ...+.+|-+ ........+.... ...-
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~~~----~~~v~~~d~--~~~~~~~~~~~~~-~~~~ 284 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVF--------YFSTAVNPAKTRAFGA----YNVLESFDL--EKNASIKRVPLPH-SYYS 284 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSC--------EEEEEECTTSSEEEEE----ESEEEEEET--TTTEEEEEEECSS-CCCE
T ss_pred ceEEEeCCCCCceEeecCCCCCc--------eeeEEECCCCCEEEEe----CCeEEEEEC--CCCcCcceecCCC-ceee
Q ss_pred eEEeeCCE-EEEEEcCCeEEEEeCCCCeEEE
Q 036281 317 LGFWRKDE-FLLESSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 317 ~~~~~~~~-il~~~~~~~l~~yd~~~~~~~~ 346 (371)
+.+.++|+ +++...++.+.+||+++++...
T Consensus 285 ~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 285 VNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EEECCCCCEEEEEcCCCcEEEEECcCCcEEE
No 135
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=38.31 E-value=1.6e+02 Score=24.78 Aligned_cols=68 Identities=10% Similarity=0.090 Sum_probs=42.4
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
++.+.+.. ..+..+.||-++. ......+..+.....-+.+.+++.+++. ..++.+.+||.++.+....
T Consensus 197 ~~~~l~s~--s~D~~i~iWd~~~--~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 197 DKPYMITA--SDDLTIKIWDYQT--KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp TCCEEEEE--ETTSEEEEEETTT--TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCCEEEEE--cCCCeEEEEeCCC--CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeee
Confidence 34444433 3678999998865 2334444433323344556667766655 5678899999999876544
No 136
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=38.16 E-value=1.8e+02 Score=24.43 Aligned_cols=141 Identities=9% Similarity=0.013 Sum_probs=64.1
Q ss_pred eEEEEEcCCC--ceeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccccc
Q 036281 188 HVAVYNFSTN--SWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 188 ~~~vy~~~~~--~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~ 265 (371)
.+..|+. ++ .|+..... .... ....+.-+|.++...... ...|+.||...+....+.+...... .+.
T Consensus 57 ~V~~~d~-~G~~~W~~~~~~--~~~~---~~~~~~~dG~~lv~~~~~--~~~v~~vd~~Gk~l~~~~~~~~~~~---~~~ 125 (276)
T 3no2_A 57 GAKMITR-DGRELWNIAAPA--GCEM---QTARILPDGNALVAWCGH--PSTILEVNMKGEVLSKTEFETGIER---PHA 125 (276)
T ss_dssp EEEEECT-TSCEEEEEECCT--TCEE---EEEEECTTSCEEEEEEST--TEEEEEECTTSCEEEEEEECCSCSS---GGG
T ss_pred CEEEECC-CCCEEEEEcCCC--Cccc---cccEECCCCCEEEEecCC--CCEEEEEeCCCCEEEEEeccCCCCc---ccc
Confidence 4667777 33 47654311 0111 112344567666554431 3478889986665444444322111 000
Q ss_pred CCCcceEEEeCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEeeCCEEEEEE-cCCeEEEEeCCCCe
Q 036281 266 VKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFWRKDEFLLES-SDKRVILYDSRYHE 343 (371)
Q Consensus 266 ~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~yd~~~~~ 343 (371)
..... -...+|.+.+.. .....+..|-.+. ..|+... ...+ .. .....+|.+++.. .+.+++.+|++|++
T Consensus 126 ~~~~v-~~~~~G~~lv~~--~~~~~v~~~d~~G~~~w~~~~--~~~~-~~--~~~~~~g~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 126 QFRQI-NKNKKGNYLVPL--FATSEVREIAPNGQLLNSVKL--SGTP-FS--SAFLDNGDCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp SCSCC-EECTTSCEEEEE--TTTTEEEEECTTSCEEEEEEC--SSCC-CE--EEECTTSCEEEECBTTSEEEEECTTTCC
T ss_pred cccCc-eECCCCCEEEEe--cCCCEEEEECCCCCEEEEEEC--CCCc-cc--eeEcCCCCEEEEeCCCCeEEEEeCcCCc
Confidence 00001 112344444433 2334444444432 2233211 1111 11 2233577777764 45589999999777
Q ss_pred EEEE
Q 036281 344 MRDL 347 (371)
Q Consensus 344 ~~~v 347 (371)
+.+-
T Consensus 198 ~~w~ 201 (276)
T 3no2_A 198 IVRR 201 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 137
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.67 E-value=35 Score=22.74 Aligned_cols=21 Identities=19% Similarity=0.284 Sum_probs=17.1
Q ss_pred EEEEEEcCCeEEEEeCCCCeE
Q 036281 324 EFLLESSDKRVILYDSRYHEM 344 (371)
Q Consensus 324 ~il~~~~~~~l~~yd~~~~~~ 344 (371)
-.++...++++++||..|++-
T Consensus 22 W~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 22 WCVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp CEEEEESSSCEEEEETTTTEE
T ss_pred cEEEECCCCCEEEecCcccce
Confidence 456667889999999999974
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=36.56 E-value=3e+02 Score=26.48 Aligned_cols=188 Identities=10% Similarity=0.022 Sum_probs=90.8
Q ss_pred CceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCC-ceee
Q 036281 123 TLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTN-SWRD 201 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~-~Wr~ 201 (371)
.+ +++|..+++...+...... ......+.+.|.. .+-++ ... .. ......+.+++..++ ..+.
T Consensus 236 ~l-~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~spdg-~~l~~-~~~-~~-----~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 236 TV-GIYHLATGKTVYLQTGEPK-------EKFLTNLSWSPDE-NILYV-AEV-NR-----AQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EE-EEEETTTTEEEECCCCSCT-------TCEEEEEEECTTS-SEEEE-EEE-CT-----TSCEEEEEEEETTTCCEEEE
T ss_pred EE-EEEECCCCceEeeccCCCC-------ceeEeeEEEECCC-CEEEE-EEe-CC-----CCCeeEEEEEECCCCceeeE
Confidence 45 9999999887665432110 1112344554432 33222 211 11 112467788888887 6665
Q ss_pred cCccccccceecc-ccceEE-E--CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcce-EEE-e
Q 036281 202 LKGFEMRFDYMVD-RIYNVY-L--NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWM-LGT-Y 275 (371)
Q Consensus 202 ~~~~~~~~~~~~~-~~~~v~-~--~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~-L~~-~ 275 (371)
+... ....... .....+ - +|.+.+....+ ....|..+|........+... .. .... +.. -
T Consensus 300 ~~~~--~~~~~~~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~~~~~~~~l~~~--~~---------~v~~~~~~sp 365 (706)
T 2z3z_A 300 LFVE--TDKHYVEPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDTTGRLIRQVTKG--EW---------EVTNFAGFDP 365 (706)
T ss_dssp EEEE--ECSSCCCCCSCCEECTTCSSEEEEEECTT-SSCEEEEEETTSCEEEECCCS--SS---------CEEEEEEECT
T ss_pred EEEc--cCCCeECccCCceeecCCCCEEEEEEccC-CccEEEEEECCCCEEEecCCC--Ce---------EEEeeeEEcC
Confidence 4311 0000000 011122 2 78866665443 345788888777666655321 11 1111 222 3
Q ss_pred CCe-EEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEE-EEEcC----CeEEEEeCCCCeE
Q 036281 276 DDC-LSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFL-LESSD----KRVILYDSRYHEM 344 (371)
Q Consensus 276 ~g~-L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il-~~~~~----~~l~~yd~~~~~~ 344 (371)
+|+ |.+...........||.++- .. ...+..... ...+.+..+|+.+ +...+ ..++++|+++++.
T Consensus 366 dg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~~~~~-~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~~ 438 (706)
T 2z3z_A 366 KGTRLYFESTEASPLERHFYCIDIKGGK---TKDLTPESG-MHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGSH 438 (706)
T ss_dssp TSSEEEEEESSSCTTCBEEEEEETTCCC---CEESCCSSS-EEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCEE
T ss_pred CCCEEEEEecCCCCceEEEEEEEcCCCC---ceeccCCCc-eEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCeE
Confidence 454 54444322333567777764 22 122222222 2345566677644 43322 4699999998873
No 139
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=36.36 E-value=2.9e+02 Score=26.34 Aligned_cols=119 Identities=12% Similarity=0.020 Sum_probs=59.4
Q ss_pred cceEEECceEEEEEecCCCCcEEEEEECCC--ceEEEe-CCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEE
Q 036281 216 IYNVYLNGYCYWVVCRPDYSKAILAFSMSN--EVFQEI-KGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFE 292 (371)
Q Consensus 216 ~~~v~~~G~lywl~~~~~~~~~Il~fD~~~--e~~~~i-~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~ 292 (371)
..++..+|.+|.....+ .|.++|..+ +.|+.- ..|..... . .......+...+|+|.+... .. .
T Consensus 62 ~~P~v~~g~vyv~~~~~----~v~AlD~~tG~~~W~~~~~~~~~~~~--~--~~~~~~g~a~~~~~v~~~t~---dg--~ 128 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS----RLFALDAKTGKRLWTYNHRLPDDIRP--C--CDVVNRGAAIYGDKVFFGTL---DA--S 128 (582)
T ss_dssp CCCEEETTEEEEEETTT----EEEEEESSSCCEEEEEECCCCTTCCC--S--SCSCCCCCEEETTEEEEEET---TT--E
T ss_pred eccEEECCEEEEEcCCC----CEEEEECCCCcEEEEEcCCCCccccc--c--cccCCCccEEECCEEEEEeC---CC--E
Confidence 46788999999887644 599999876 456542 22221100 0 00000112345666665431 12 2
Q ss_pred EEEeeC----CceeEEEEecC-CCcc-eeeeEEee--CC--EEEEEEc------CCeEEEEeCCCCeEEEE
Q 036281 293 LWIMKG----GFWIKHLTFGP-FIET-YQPLGFWR--KD--EFLLESS------DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 293 iW~L~~----~~W~~~~~i~~-~~~~-~~~~~~~~--~~--~il~~~~------~~~l~~yd~~~~~~~~v 347 (371)
|..|+- ..|.....-.. ...+ ..|+-... +| .+++... ++.++.||.+|++..+.
T Consensus 129 l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp EEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred EEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 333332 34554321100 0012 34443322 23 3444332 56899999999998775
No 140
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=35.99 E-value=1.9e+02 Score=24.17 Aligned_cols=140 Identities=11% Similarity=0.021 Sum_probs=81.4
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCce-EEEeCCCCCCCCCcccc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV-FQEIKGPSVPQTTTYYQ 264 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~-~~~i~~P~~~~~~~~~~ 264 (371)
...+.+++..++.=...- +++.......-...++.+|-++... ..+..||..+-+ ...++.|..
T Consensus 42 ~S~v~~vD~~tgkv~~~~----~l~~~~fgeGi~~~~~~ly~ltw~~---~~v~v~D~~tl~~~~ti~~~~~-------- 106 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRA----EVPPPYFGAGIVAWRDRLIQLTWRN---HEGFVYDLATLTPRARFRYPGE-------- 106 (243)
T ss_dssp SCEEEEEETTTCCEEEEE----ECCTTCCEEEEEEETTEEEEEESSS---SEEEEEETTTTEEEEEEECSSC--------
T ss_pred CceEEEEECCCCCEEEEE----eCCCCcceeEEEEeCCEEEEEEeeC---CEEEEEECCcCcEEEEEeCCCC--------
Confidence 467888999887432221 1111111112245678999988653 689999998854 456666532
Q ss_pred cCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCC--C-cce--eeeEEeeCCEEEEEE-cCCeEEEEe
Q 036281 265 SVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPF--I-ETY--QPLGFWRKDEFLLES-SDKRVILYD 338 (371)
Q Consensus 265 ~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~--~-~~~--~~~~~~~~~~il~~~-~~~~l~~yd 338 (371)
...|..-+++|.+.. ... .|++++-..=....+|... . .+. .-+. +.+|+++... ..+.+...|
T Consensus 107 ----Gwglt~dg~~L~vSd---gs~--~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe-~~~G~lyanvw~s~~I~vID 176 (243)
T 3mbr_X 107 ----GWALTSDDSHLYMSD---GTA--VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE-WVNGELLANVWLTSRIARID 176 (243)
T ss_dssp ----CCEEEECSSCEEEEC---SSS--EEEEECTTTCCEEEEEECEETTEECCCEEEEE-EETTEEEEEETTTTEEEEEC
T ss_pred ----ceEEeeCCCEEEEEC---CCC--eEEEEeCCCCeEEEEEEEccCCcccccceeeE-EeCCEEEEEECCCCeEEEEE
Confidence 234555567777743 233 4777775332333444321 1 111 2233 2388888776 467899999
Q ss_pred CCCCeE-EEEEEe
Q 036281 339 SRYHEM-RDLGIT 350 (371)
Q Consensus 339 ~~~~~~-~~v~~~ 350 (371)
++|+++ +++...
T Consensus 177 p~tG~V~~~idl~ 189 (243)
T 3mbr_X 177 PASGKVVAWIDLQ 189 (243)
T ss_dssp TTTCBEEEEEECG
T ss_pred CCCCCEEEEEECC
Confidence 999986 555544
No 141
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=35.85 E-value=2.5e+02 Score=25.46 Aligned_cols=109 Identities=8% Similarity=0.002 Sum_probs=60.0
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCe-EEEEecCC-CCCEEEEEEeeC
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDC-LSLLYSDK-FAHSFELWIMKG 298 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~-L~l~~~~~-~~~~~~iW~L~~ 298 (371)
+|.+|+.... ..|..||+.+.+...+..+ .. ....+.. .+|. |.+..... ......+|...+
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~--~~---------~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSG--LS---------KVRTICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECC--CS---------CEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecC--CC---------CcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 3888887754 4899999999877665321 11 1223433 4565 66654311 223445565555
Q ss_pred CceeEEEEecCCCcceeeeEEee-CCEEEEEE-cCCeEEEEeCCCCeEEE
Q 036281 299 GFWIKHLTFGPFIETYQPLGFWR-KDEFLLES-SDKRVILYDSRYHEMRD 346 (371)
Q Consensus 299 ~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~~~~~~ 346 (371)
..|.....+.... ...-+++.. +|.|++.. ..++++.||++++....
T Consensus 214 g~~~~~~~l~~~~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~ 262 (430)
T 3tc9_A 214 SGFKVITELTKGQ-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTP 262 (430)
T ss_dssp GTSCSEEEEEECS-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceeeeeeeccCC-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEE
Confidence 4444222221111 112245555 67777765 45678888888777633
No 142
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=35.61 E-value=2.1e+02 Score=24.51 Aligned_cols=108 Identities=7% Similarity=-0.033 Sum_probs=56.1
Q ss_pred ECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeC
Q 036281 221 LNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKG 298 (371)
Q Consensus 221 ~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~ 298 (371)
.+|.+||.... ...|..+|+.......+- ..... ....++. .+|.|+.... ..... |+...-
T Consensus 87 ~~~~ly~~d~~---~~~I~~~~~~g~~~~~~~-~~~~~---------~P~~iavdp~~g~ly~~d~-~~~~~--I~~~~~ 150 (316)
T 1ijq_A 87 IHSNIYWTDSV---LGTVSVADTKGVKRKTLF-RENGS---------KPRAIVVDPVHGFMYWTDW-GTPAK--IKKGGL 150 (316)
T ss_dssp TTTEEEEEETT---TTEEEEEETTSSSEEEEE-ECTTC---------CEEEEEEETTTTEEEEEEC-SSSCE--EEEEET
T ss_pred cCCeEEEEECC---CCEEEEEeCCCCceEEEE-ECCCC---------CcceEEeCCCCCEEEEEcc-CCCCe--EEEEcC
Confidence 36899998754 357999999875444331 11111 1122333 4677766542 11133 444432
Q ss_pred -CceeEEEEecCCCcceee--eEEee-CCEEEEEE-cCCeEEEEeCCCCeEEEE
Q 036281 299 -GFWIKHLTFGPFIETYQP--LGFWR-KDEFLLES-SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 299 -~~W~~~~~i~~~~~~~~~--~~~~~-~~~il~~~-~~~~l~~yd~~~~~~~~v 347 (371)
.+-.+.. + .. .+..| +++.. ++.|++.. ....+..+|++.+..+.+
T Consensus 151 dG~~~~~~-~-~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 151 NGVDIYSL-V-TE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp TSCCEEEE-E-CS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCCeEEE-E-EC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 2222211 1 11 23344 44553 56777765 356788999886655555
No 143
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=35.32 E-value=3.2e+02 Score=26.45 Aligned_cols=144 Identities=10% Similarity=-0.052 Sum_probs=76.5
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCce---EEEeCCCCCCCCCcc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV---FQEIKGPSVPQTTTY 262 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~---~~~i~~P~~~~~~~~ 262 (371)
...+.+.+..++.|+.+... ... ...++..+|.+|..+..+.....|..+|+.+.. |+.+-.+....
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~---~~~---~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---- 320 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKG---VGA---KYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSA---- 320 (695)
T ss_dssp EEEEEEECTTCSSCEEEEEC---SSC---CEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSC----
T ss_pred ceEEEEEcCCCCceEEeecC---CCc---eEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCC----
Confidence 34555566656678776421 110 113344577766665432235789999997643 66553222111
Q ss_pred cccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCC-CcceeeeEEeeCC-EEEEEEc----CCeEE
Q 036281 263 YQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPF-IETYQPLGFWRKD-EFLLESS----DKRVI 335 (371)
Q Consensus 263 ~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~-~~~~~~~~~~~~~-~il~~~~----~~~l~ 335 (371)
....+...+|.|.+... ......||+++- .. ....+... ......+....++ .+++... ...++
T Consensus 321 -----~l~~~~~~~~~lv~~~~--~dg~~~l~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~ 391 (695)
T 2bkl_A 321 -----SLLSVSIVGGHLSLEYL--KDATSEVRVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIY 391 (695)
T ss_dssp -----EEEEEEEETTEEEEEEE--ETTEEEEEEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEE
T ss_pred -----eEEEEEEECCEEEEEEE--ECCEEEEEEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEE
Confidence 11123334888877553 456678888873 22 23334321 2122223333344 5655532 35799
Q ss_pred EEeCCCCeEEEEE
Q 036281 336 LYDSRYHEMRDLG 348 (371)
Q Consensus 336 ~yd~~~~~~~~v~ 348 (371)
.||+++++.+.+.
T Consensus 392 ~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 392 KTSVSTGKSELWA 404 (695)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEEe
Confidence 9999998876654
No 144
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=35.25 E-value=2.1e+02 Score=24.39 Aligned_cols=109 Identities=8% Similarity=-0.053 Sum_probs=63.7
Q ss_pred EECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeC
Q 036281 220 YLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKG 298 (371)
Q Consensus 220 ~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~ 298 (371)
+.+|.||--+... ..|..+|+++.+. ..+ +|.... ..-+...+++|+.... ... .+|+.+-
T Consensus 62 ~~~~~Ly~stG~~---g~v~~iD~~Tgkv~~~~-l~~~~F----------geGit~~g~~Ly~ltw--~~~--~v~V~D~ 123 (268)
T 3nok_A 62 FHQGHFFESTGHQ---GTLRQLSLESAQPVWME-RLGNIF----------AEGLASDGERLYQLTW--TEG--LLFTWSG 123 (268)
T ss_dssp EETTEEEEEETTT---TEEEECCSSCSSCSEEE-ECTTCC----------EEEEEECSSCEEEEES--SSC--EEEEEET
T ss_pred EECCEEEEEcCCC---CEEEEEECCCCcEEeEE-CCCCcc----------eeEEEEeCCEEEEEEc--cCC--EEEEEEC
Confidence 3456666655442 3499999998765 445 654321 1235556788888763 334 4555554
Q ss_pred CceeEEEEecCCCcceeeeEEee-CCEEEEEEcCCeEEEEeCCCCeE-EEEEE
Q 036281 299 GFWIKHLTFGPFIETYQPLGFWR-KDEFLLESSDKRVILYDSRYHEM-RDLGI 349 (371)
Q Consensus 299 ~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~~~~~l~~yd~~~~~~-~~v~~ 349 (371)
.+-..+-+|.... .+.++.. ++.+++...+..+..+|++|.+. +.+.+
T Consensus 124 ~Tl~~~~ti~~~~---eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 124 MPPQRERTTRYSG---EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTTEEEEEEECSS---CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred CcCcEEEEEeCCC---ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 3444555554321 1233333 44566665678999999999664 55555
No 145
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=34.19 E-value=48 Score=25.12 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=22.5
Q ss_pred EEEEEEcCCeEEEEeCCCCeEEEEEEecc
Q 036281 324 EFLLESSDKRVILYDSRYHEMRDLGITGL 352 (371)
Q Consensus 324 ~il~~~~~~~l~~yd~~~~~~~~v~~~~~ 352 (371)
+|+.....-.++.||.++++|++.++.|.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcce
Confidence 45665555668888999999999999874
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=34.18 E-value=2.2e+02 Score=24.34 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=54.6
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcce
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETY 314 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~ 314 (371)
..|..+|+.+.+.... +..... ....+.. -+|.+.+.. .....+.||-+.. ......+..+..-.
T Consensus 164 ~~i~~wd~~~~~~~~~-~~~h~~---------~v~~~~~~~~~~~l~sg--~~d~~v~~wd~~~--~~~~~~~~~h~~~v 229 (340)
T 1got_B 164 TTCALWDIETGQQTTT-FTGHTG---------DVMSLSLAPDTRLFVSG--ACDASAKLWDVRE--GMCRQTFTGHESDI 229 (340)
T ss_dssp SCEEEEETTTTEEEEE-ECCCSS---------CEEEEEECTTSSEEEEE--ETTSCEEEEETTT--CSEEEEECCCSSCE
T ss_pred CcEEEEECCCCcEEEE-EcCCCC---------ceEEEEECCCCCEEEEE--eCCCcEEEEECCC--CeeEEEEcCCcCCE
Confidence 4688889887654322 111111 1222332 356655544 3678899998865 23334444333334
Q ss_pred eeeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 315 QPLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 315 ~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
.-+++.+++..++. ..++.+.+||+++++.
T Consensus 230 ~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 230 NAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 44566667766555 5678899999988764
No 147
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=34.15 E-value=3.2e+02 Score=26.22 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=23.4
Q ss_pred cceEEECceEEEEEe-cCCCCcEEEEEEC-CC--ceEEE
Q 036281 216 IYNVYLNGYCYWVVC-RPDYSKAILAFSM-SN--EVFQE 250 (371)
Q Consensus 216 ~~~v~~~G~lywl~~-~~~~~~~Il~fD~-~~--e~~~~ 250 (371)
..++..+|.+|.... .. .|.++|. .+ +.|+.
T Consensus 56 ~tP~v~~g~vyv~~~~~~----~v~AlD~~~tG~~lW~~ 90 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN----NTFALGLDDPGTILWQD 90 (599)
T ss_dssp SCCEEETTEEEEECSTTT----CEEEEETTCTTSEEEEE
T ss_pred eccEEECCEEEEEeCCCC----EEEEEeCCCCCcEEEEE
Confidence 467889999998776 44 7999999 65 45654
No 148
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=33.92 E-value=3.4e+02 Score=26.47 Aligned_cols=112 Identities=16% Similarity=0.098 Sum_probs=63.3
Q ss_pred CceEEEEEecCCCCcEEEEEECCC--ceEEEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeC-
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSN--EVFQEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKG- 298 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~--e~~~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~- 298 (371)
++.+|+.+..+.....|...|+.+ +.|+.+- |..... ...+...++.|.+... ......||+++-
T Consensus 327 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~---------l~~~~~~~~~lv~~~~--~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 327 GDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDN---------LESVGIAGNRLFASYI--HDAKSQVLAFDLD 394 (741)
T ss_dssp TTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSE---------EEEEEEEBTEEEEEEE--ETTEEEEEEEETT
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCe---------EEEEEEECCEEEEEEE--ECCEEEEEEEeCC
Confidence 456777776543456799999988 5776653 432111 1123334788777553 445678888873
Q ss_pred CceeEEEEec-CCCcceeeeEEeeCC-EEEEEEc----CCeEEEEeCCCCeEEEE
Q 036281 299 GFWIKHLTFG-PFIETYQPLGFWRKD-EFLLESS----DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 299 ~~W~~~~~i~-~~~~~~~~~~~~~~~-~il~~~~----~~~l~~yd~~~~~~~~v 347 (371)
.. ....+. +.......+....++ .+++... ...++.||+++++.+.+
T Consensus 395 g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 395 GK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp SC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 22 233343 222222233333444 4665532 35799999999886554
No 149
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=33.90 E-value=11 Score=33.97 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=19.0
Q ss_pred ceEEECceEEEEEecCCCCcEEEEEECCCc--eEEE
Q 036281 217 YNVYLNGYCYWVVCRPDYSKAILAFSMSNE--VFQE 250 (371)
Q Consensus 217 ~~v~~~G~lywl~~~~~~~~~Il~fD~~~e--~~~~ 250 (371)
.++..+|.+|.-...+ .|.++|..+. .|+.
T Consensus 4 sP~v~~~~v~~gs~dg----~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG----SLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ----CTTEEEEEETTS----EEEEEETTTCCEEEEE
T ss_pred CCeeeCCEEEEEcCCC----EEEEEECCCCCEEEEe
Confidence 4567788888776554 7999998764 4543
No 150
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=33.01 E-value=2.3e+02 Score=24.21 Aligned_cols=67 Identities=18% Similarity=0.251 Sum_probs=39.9
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCC----ce-eEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGG----FW-IKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~----~W-~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
+|.+.+.. ..+..+.||-+... .. .....+..+.....-+.+.+++.+++. ..++.+.+||+++++.
T Consensus 38 d~~~l~sg--s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 38 DSPVLISG--SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTT 110 (343)
T ss_dssp CCCEEEEE--ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCE
T ss_pred CCCEEEEE--cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 45554443 35678999998751 11 122233333323344556667776655 5678899999998764
No 151
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=32.79 E-value=2.3e+02 Score=24.18 Aligned_cols=68 Identities=10% Similarity=0.066 Sum_probs=42.4
Q ss_pred CCeEEEEecCCCCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
+|.+.+.. .....+.||-+.. ........+..+.....-+.+.+++.++....++.+.+||+++++..
T Consensus 108 ~~~~l~s~--~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~ 177 (340)
T 1got_B 108 SGNYVACG--GLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT 177 (340)
T ss_dssp TSSEEEEE--ETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEE
T ss_pred CCCEEEEE--eCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEE
Confidence 45544444 3568899999876 22233333333333333344556778777778889999999988754
No 152
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=32.03 E-value=2.3e+02 Score=23.81 Aligned_cols=71 Identities=10% Similarity=0.096 Sum_probs=42.6
Q ss_pred CCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEeeCCE-EEE-EEcCCeEEEEeC-CCCeEEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFWRKDE-FLL-ESSDKRVILYDS-RYHEMRDLG 348 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~~~~~-il~-~~~~~~l~~yd~-~~~~~~~v~ 348 (371)
+|.+.+.. .....+.||-++. ........+.....-..-+.+.+++. .++ ...++.+.+||+ ++++...+.
T Consensus 22 ~~~~l~~~--~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 96 (342)
T 1yfq_A 22 SKSLLLIT--SWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALT 96 (342)
T ss_dssp GGTEEEEE--ETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECB
T ss_pred CCCEEEEE--cCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEecc
Confidence 45554444 3568899999987 32222222222222234455566677 444 456788999999 988875553
No 153
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=32.02 E-value=2.5e+02 Score=24.23 Aligned_cols=56 Identities=11% Similarity=0.059 Sum_probs=35.5
Q ss_pred CCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 287 FAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
....+.+|-+.. ......+..+.....-+.+..++.+++. ..++.+.+||+++.+.
T Consensus 312 ~~~~i~v~d~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 312 YGSTIAVYTVYS--GEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp ETTEEEEEETTT--CCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred cCCEEEEEECcC--CcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 356888888865 3444555444333445666777776665 5678899999998764
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=31.82 E-value=2.5e+02 Score=24.12 Aligned_cols=73 Identities=10% Similarity=0.151 Sum_probs=43.2
Q ss_pred eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCC-cc--eeeeEEeeCCEEEEE-Ec--CCeEEEEeCC--CCeEEE
Q 036281 275 YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFI-ET--YQPLGFWRKDEFLLE-SS--DKRVILYDSR--YHEMRD 346 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~-~~--~~~~~~~~~~~il~~-~~--~~~l~~yd~~--~~~~~~ 346 (371)
-+|+..++.. .....+.+|-++.........+...+ .. ..-+.+.++|+.++. .. .+.+.+|++. +++++.
T Consensus 220 pdg~~l~v~~-~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~ 298 (361)
T 3scy_A 220 SDGKFAYLIN-EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTK 298 (361)
T ss_dssp TTSSEEEEEE-TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEc-CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEE
Confidence 4676444332 35678999999875555555554222 11 234566778875544 43 3678888874 667665
Q ss_pred EE
Q 036281 347 LG 348 (371)
Q Consensus 347 v~ 348 (371)
+.
T Consensus 299 ~~ 300 (361)
T 3scy_A 299 VG 300 (361)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 155
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=31.08 E-value=2.7e+02 Score=24.32 Aligned_cols=207 Identities=11% Similarity=0.028 Sum_probs=0.0
Q ss_pred EeeecceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcce
Q 036281 109 IGPYDGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSH 188 (371)
Q Consensus 109 ~~s~~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 188 (371)
+.+.+.+|+-......+.|||..|++....-... ......+.+.|... .++.... ...
T Consensus 74 ~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h---------~~~v~~~~~s~~g~--~las~~~-----------d~~ 131 (380)
T 3iz6_a 74 WTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLH---------CPWVMECAFAPNGQ--SVACGGL-----------DSA 131 (380)
T ss_dssp ECTTSSCEEEEETTSEEEEEETTTTEEEEEEECC---------CTTCCCCEECTTSS--EEEECCS-----------SSC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCccceEEecC---------CCCEEEEEECCCCC--EEEEeeC-----------CCc
Q ss_pred EEEEEcCCCceeecCccccccceecc---ccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCccccc
Q 036281 189 VAVYNFSTNSWRDLKGFEMRFDYMVD---RIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 189 ~~vy~~~~~~Wr~~~~~~~~~~~~~~---~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~ 265 (371)
+.+|+..+..-+.-..........+. ..-...-++.-+.++... ...|..+|+.+.+....-....... .
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~--D~~i~~wd~~~~~~~~~~~~~~~~~-----h 204 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSG--DQTCVLWDVTTGQRISIFGSEFPSG-----H 204 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECT--TSCEEEECTTTCCEEEEECCCSSSS-----C
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECC--CCcEEEEEcCCCcEEEEeecccCCC-----C
Q ss_pred CCCcceEEEe--CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCC
Q 036281 266 VKTPWMLGTY--DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYH 342 (371)
Q Consensus 266 ~~~~~~L~~~--~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~ 342 (371)
......+... ++.+.+.. ..+..+.||-+. ..-.....+..+..-..-+.+.+++..++. ..++.+.+||++++
T Consensus 205 ~~~v~~~~~~~~~~~~l~sg--s~D~~v~~wd~~-~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISG--SCDTTVRLWDLR-ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEE--ETTSCEEEEETT-TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred ccCeEEEEeecCCCCEEEEE--ECCCeEEEEECC-CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Q ss_pred eEEEE
Q 036281 343 EMRDL 347 (371)
Q Consensus 343 ~~~~v 347 (371)
+...+
T Consensus 282 ~~~~~ 286 (380)
T 3iz6_a 282 HQLQV 286 (380)
T ss_dssp EEEEE
T ss_pred cEEEE
No 156
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=31.06 E-value=1.2e+02 Score=26.64 Aligned_cols=56 Identities=16% Similarity=0.153 Sum_probs=36.0
Q ss_pred EEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEEEE
Q 036281 292 ELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDLGI 349 (371)
Q Consensus 292 ~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v~~ 349 (371)
.||+.+-.....+.++.... ..-+.+..+|+.++....+.+.+||.++++++.+..
T Consensus 287 ~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 287 EIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEE
T ss_pred eEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEE
Confidence 55555544455566664332 444667788877666555889999999995555543
No 157
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.62 E-value=2.3e+02 Score=25.02 Aligned_cols=67 Identities=6% Similarity=0.014 Sum_probs=41.0
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC--CCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP--FIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~--~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
+|.+.+.. .....+.+|-++... ....+.. ......-+.+.+++..++. ..++.+.+||+++++...
T Consensus 181 ~~~~l~~~--~~d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVAL--TNLSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEE--ETTSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCEEEEE--eCCCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE
Confidence 35555544 356789999887622 2333322 3333444556667776665 567789999999887533
No 158
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=30.55 E-value=2.5e+02 Score=23.85 Aligned_cols=96 Identities=16% Similarity=0.122 Sum_probs=55.8
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|..+|+.+.+. ..+.... . ....+.- -+|.+.+.. .....+.||-++.. .....+..+...
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~--~---------~v~~l~~spd~~~l~s~--s~dg~i~iwd~~~~--~~~~~~~~h~~~ 250 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHA--M---------PIRSLTFSPDSQLLVTA--SDDGYIKIYDVQHA--NLAGTLSGHASW 250 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCS--S---------CCCEEEECTTSCEEEEE--CTTSCEEEEETTTC--CEEEEECCCSSC
T ss_pred CeEEEEECCCCcEEEEEcccC--C---------ceeEEEEcCCCCEEEEE--cCCCeEEEEECCCc--ceeEEEcCCCCc
Confidence 4688889887654 2332111 0 1122322 356655544 46778999988752 233444433333
Q ss_pred eeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 314 YQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 314 ~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
..-+.+.+++..++. ..++.+.+||+++++...
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 284 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVH 284 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEE
Confidence 344566667776555 567889999999887543
No 159
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=30.53 E-value=2.6e+02 Score=24.05 Aligned_cols=29 Identities=31% Similarity=0.363 Sum_probs=20.3
Q ss_pred eeEEeeCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 316 PLGFWRKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 316 ~~~~~~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
-+.+.+++..++. ..++.+.+||+++++.
T Consensus 250 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 250 GLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred EEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 3455567765554 5678899999988653
No 160
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=30.12 E-value=2.3e+02 Score=23.98 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=40.7
Q ss_pred eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee--CCEEEE-EEcCCeEEEEeCCCCeEE
Q 036281 275 YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR--KDEFLL-ESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~--~~~il~-~~~~~~l~~yd~~~~~~~ 345 (371)
.+|++.+.. ..+..+.||-++.........+.-+..-..-+.+.. ++.+++ ...++.+.+||+++++++
T Consensus 23 ~~g~~lasg--s~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 23 YYGTRLATC--SSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE 94 (316)
T ss_dssp GGGCEEEEE--ETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC
T ss_pred CCCCEEEEE--eCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce
Confidence 345554444 367899999998643333444433332233344432 355444 456888999999987543
No 161
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=29.76 E-value=2.6e+02 Score=23.84 Aligned_cols=195 Identities=8% Similarity=-0.087 Sum_probs=93.4
Q ss_pred cceEEEee--cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEE
Q 036281 113 DGIFCLLK--SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVA 190 (371)
Q Consensus 113 ~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (371)
+|.+.+.+ ...+ +++||.+++...+..+. .. .++.+++. +. ++... ...+.
T Consensus 60 ~~~l~~~d~~~~~i-~~~d~~~~~~~~~~~~~---------~v--~~i~~~~d-g~--l~v~~------------~~gl~ 112 (326)
T 2ghs_A 60 SGTAWWFNILEREL-HELHLASGRKTVHALPF---------MG--SALAKISD-SK--QLIAS------------DDGLF 112 (326)
T ss_dssp TTEEEEEEGGGTEE-EEEETTTTEEEEEECSS---------CE--EEEEEEET-TE--EEEEE------------TTEEE
T ss_pred CCEEEEEECCCCEE-EEEECCCCcEEEEECCC---------cc--eEEEEeCC-Ce--EEEEE------------CCCEE
Confidence 45555444 3455 99999988766543221 11 34455543 22 22221 12377
Q ss_pred EEEcCCCceeecCccccccceeccccceEE--ECceEEEEEecC---CCCcEEEEEECCCceEEEeCCCCCCCCCccccc
Q 036281 191 VYNFSTNSWRDLKGFEMRFDYMVDRIYNVY--LNGYCYWVVCRP---DYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 191 vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~---~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~ 265 (371)
+|+..++..+.+.......+.. ....+. -+|.+|.-.... .....|..+| +.++..+. + ...
T Consensus 113 ~~d~~~g~~~~~~~~~~~~~~~--~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~-~-~~~------- 179 (326)
T 2ghs_A 113 LRDTATGVLTLHAELESDLPGN--RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF-A-DIS------- 179 (326)
T ss_dssp EEETTTCCEEEEECSSTTCTTE--EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE-E-EES-------
T ss_pred EEECCCCcEEEEeeCCCCCCCC--CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee-C-CCc-------
Confidence 7888888776553211011100 111222 257765443321 0134788888 45555432 1 000
Q ss_pred CCCcceEEE-eCCe-EEEEecCCCCCEEEEEEee--CC-cee--EEE-EecCCCcceeeeEEeeCCEEEEEE-cCCeEEE
Q 036281 266 VKTPWMLGT-YDDC-LSLLYSDKFAHSFELWIMK--GG-FWI--KHL-TFGPFIETYQPLGFWRKDEFLLES-SDKRVIL 336 (371)
Q Consensus 266 ~~~~~~L~~-~~g~-L~l~~~~~~~~~~~iW~L~--~~-~W~--~~~-~i~~~~~~~~~~~~~~~~~il~~~-~~~~l~~ 336 (371)
....+.. -+|+ |++.. .....+.+|-++ .. ... +.. .+........-+.+..+|.+++.. ..+++..
T Consensus 180 --~~~~i~~s~dg~~lyv~~--~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 180 --IPNSICFSPDGTTGYFVD--TKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDR 255 (326)
T ss_dssp --SEEEEEECTTSCEEEEEE--TTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEE
T ss_pred --ccCCeEEcCCCCEEEEEE--CCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEE
Confidence 0112222 3454 44443 234566666654 12 221 111 221111122234555678888875 3578999
Q ss_pred EeCCCCeEEEEEEec
Q 036281 337 YDSRYHEMRDLGITG 351 (371)
Q Consensus 337 yd~~~~~~~~v~~~~ 351 (371)
||++.+..+.+....
T Consensus 256 ~d~~g~~~~~i~~~~ 270 (326)
T 2ghs_A 256 YDTDGNHIARYEVPG 270 (326)
T ss_dssp ECTTCCEEEEEECSC
T ss_pred ECCCCCEEEEEECCC
Confidence 999777677776543
No 162
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=29.69 E-value=69 Score=23.65 Aligned_cols=37 Identities=3% Similarity=0.038 Sum_probs=26.2
Q ss_pred EEEecccc-ccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEe
Q 036281 126 NLWNVSLN-EYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLIL 173 (371)
Q Consensus 126 ~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 173 (371)
++.||.|+ +|...-... ..+.+-+|+..+.|+|+.+.
T Consensus 14 ~~~D~~tk~~W~p~g~~~-----------~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 14 FQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEECTTTSCSEEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEEcCCCCCceEeCCCCc-----------eEEEEEEcCCCCEEEEEEcc
Confidence 88999996 885432221 34667778888899999854
No 163
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=28.80 E-value=2.8e+02 Score=24.35 Aligned_cols=66 Identities=14% Similarity=0.199 Sum_probs=40.1
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
+|++.+.. .....+.||-++.. .....+..+..-..-+.+..+++.++. ..++.+.+||+++++..
T Consensus 134 dg~~l~s~--~~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 134 DGKFLATG--AEDRLIRIWDIENR--KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp TSSEEEEE--ETTSCEEEEETTTT--EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCEEEEE--cCCCeEEEEECCCC--cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 45554444 35678899988652 223333333322344555566665554 56788999999988754
No 164
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=28.72 E-value=3.3e+02 Score=24.69 Aligned_cols=113 Identities=10% Similarity=0.095 Sum_probs=57.9
Q ss_pred cceEEEC-----ceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCC-CC
Q 036281 216 IYNVYLN-----GYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDK-FA 288 (371)
Q Consensus 216 ~~~v~~~-----G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~-~~ 288 (371)
..++.++ |.|||.... ..|..+|+.+.+...+..+. . ....+. ..+|.|.+..... ..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~----~~I~~id~~~g~v~~~~~~~--~---------~P~giavd~dG~lyVad~~~~~~ 205 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR----DAFRHVDFVNQYVDIKTTNI--G---------QCADVNFTLNGDMVVVDDQSSDT 205 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT----SCEEEEETTTTEEEEECCCC--S---------CEEEEEECTTCCEEEEECCSCTT
T ss_pred CceEEEccccCCCEEEEEeCC----CCEEEEECCCCEEEEeecCC--C---------CccEEEECCCCCEEEEcCCCCcc
Confidence 3566666 899987653 37999999888877663211 1 112233 2466666644211 11
Q ss_pred CEEEEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEEE-cCCeEEEEeCCCCeE
Q 036281 289 HSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLES-SDKRVILYDSRYHEM 344 (371)
Q Consensus 289 ~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~~-~~~~l~~yd~~~~~~ 344 (371)
..-.+++..+..|.....+.... ...-+++.. +|.|++.. ..+.++.||+++++.
T Consensus 206 ~~gv~~~~~~~~~~~~~~~~~~~-~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 206 NTGIYLFTRASGFTERLSLCNAR-GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp SEEEEEECGGGTTCCEEEEEECS-SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cceEEEEECCCCeeccccccccC-CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 22233333333333211111110 112245555 56666664 345677777776665
No 165
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=27.94 E-value=2.8e+02 Score=23.56 Aligned_cols=61 Identities=10% Similarity=0.142 Sum_probs=39.2
Q ss_pred CCCEEEEEEeeC------CceeEEEEecC-CCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEE
Q 036281 287 FAHSFELWIMKG------GFWIKHLTFGP-FIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 287 ~~~~~~iW~L~~------~~W~~~~~i~~-~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v 347 (371)
.+..+.||-+.. ..|.....+.. +..-..-+.+..++.|+....++.+.+||.++++++.+
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEE
Confidence 567899998864 34665555432 32223334444555555556788899999998877554
No 166
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=27.35 E-value=3.4e+02 Score=26.12 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=39.1
Q ss_pred CCCCEEEEEEeeC--CceeE-EEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 286 KFAHSFELWIMKG--GFWIK-HLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 286 ~~~~~~~iW~L~~--~~W~~-~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
..+..+.||-+.. ..+.. ..++..+.....-+.+..+|.+++. ..++.+.+||+++++..
T Consensus 402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~ 465 (694)
T 3dm0_A 402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST 465 (694)
T ss_dssp ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce
Confidence 3678999999876 22322 2333334333445666677876665 56788999999988653
No 167
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=27.12 E-value=2.6e+02 Score=22.93 Aligned_cols=64 Identities=17% Similarity=0.165 Sum_probs=39.7
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC-CCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP-FIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~-~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
++.+.+.. .....+.+|-.. .....+.. ......-+.+.+++.++....++.+.+||+++++..
T Consensus 154 ~~~~l~~~--~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTA--SADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEE--ETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEE--ECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhh
Confidence 55555544 356788999732 12222322 333344566667888666677889999999987643
No 168
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=27.11 E-value=62 Score=16.77 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=14.5
Q ss_pred EEEcCCeEEEEeCCCCeEE
Q 036281 327 LESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 327 ~~~~~~~l~~yd~~~~~~~ 345 (371)
+....++.++||..|++-.
T Consensus 5 ~~~~~g~~YYyN~~T~~s~ 23 (27)
T 1e0n_A 5 IIHENGRPLYYNAEQKTKL 23 (27)
T ss_dssp EEESSSSEEEEETTTTEEE
T ss_pred EECCCCCeEEEECCCCCEe
Confidence 3456788999999998743
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=26.90 E-value=3.2e+02 Score=23.90 Aligned_cols=104 Identities=13% Similarity=0.194 Sum_probs=51.3
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCc----------eeE
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGF----------WIK 303 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~----------W~~ 303 (371)
..|-.+|+.+.+. ..+..+..... + .......+.- -+|++.+.. ..+..+.||-+.... ...
T Consensus 229 ~~v~iwd~~~~~~~~~~~~~~~~~~---~-h~~~v~~v~~~~~g~~l~s~--s~d~~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 229 RAVRVWDSETGFLVERLDSENESGT---G-HKDSVYSVVFTRDGQSVVSG--SLDRSVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp SCEEEEETTTCCEEEEEC------C---C-CSSCEEEEEECTTSSEEEEE--ETTSEEEEEEC---------------CE
T ss_pred CcEEEEECCCCcEEEeecccccCCC---C-CCCCEEEEEECCCCCEEEEE--eCCCEEEEEECCCCCCcccccCCCCCcc
Confidence 4688889887654 23332221100 0 0011222332 356655544 367899999987510 111
Q ss_pred EEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEE
Q 036281 304 HLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMR 345 (371)
Q Consensus 304 ~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~ 345 (371)
...+..+.....-+++..++..++. ..++.+.+||.++++..
T Consensus 303 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 303 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp EEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred eEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 1122122222334555567766555 56788999999988743
No 170
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=26.60 E-value=2.8e+02 Score=23.05 Aligned_cols=139 Identities=12% Similarity=0.190 Sum_probs=69.4
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEE--CceEEEEEecCCCCcEEEEEECCCceEE-EeCCCCCCCCCcc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPDYSKAILAFSMSNEVFQ-EIKGPSVPQTTTY 262 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~Il~fD~~~e~~~-~i~~P~~~~~~~~ 262 (371)
.-.+.+|+..++..+.......... .-..+.+ +|........ ...|..+|+.+.+.. .+.... .
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~~--~---- 184 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSAP----ACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHT--D---- 184 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSSS----CEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCS--S----
T ss_pred CCcEEEEECCCCCcceeeecccCCC----ceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeeccc--C----
Confidence 3568888888876543321100000 0011211 3443333332 236888998876543 332211 1
Q ss_pred cccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCC
Q 036281 263 YQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSR 340 (371)
Q Consensus 263 ~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~ 340 (371)
....+.. -+|...+.. .....+.+|-++.. .....+.... -..-+.+.++++.++. ..++.+.+||++
T Consensus 185 -----~i~~~~~~~~~~~l~~~--~~dg~i~~~d~~~~--~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 185 -----GASCIDISNDGTKLWTG--GLDNTVRSWDLREG--RQLQQHDFTS-QIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp -----CEEEEEECTTSSEEEEE--ETTSEEEEEETTTT--EEEEEEECSS-CEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -----ceEEEEECCCCCEEEEE--ecCCcEEEEECCCC--ceEeeecCCC-ceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 1122322 255555544 25678999988752 2222232221 2233455566665554 567889999999
Q ss_pred CCeEEEE
Q 036281 341 YHEMRDL 347 (371)
Q Consensus 341 ~~~~~~v 347 (371)
+++...+
T Consensus 255 ~~~~~~~ 261 (337)
T 1gxr_A 255 KPDKYQL 261 (337)
T ss_dssp SSCEEEE
T ss_pred CCCeEEE
Confidence 8876544
No 171
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=26.46 E-value=3.2e+02 Score=23.77 Aligned_cols=70 Identities=9% Similarity=0.070 Sum_probs=40.8
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC-CCcceeeeEEeeCCE-EEEE-EcCCeEEEEeCCCCe--EEEEEE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP-FIETYQPLGFWRKDE-FLLE-SSDKRVILYDSRYHE--MRDLGI 349 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~-~~~~~~~~~~~~~~~-il~~-~~~~~l~~yd~~~~~--~~~v~~ 349 (371)
+|++.+.. .....+.||-+.. ......+.. ......-+.+.+++. +++. ..++.+.+||+++++ +..+..
T Consensus 258 ~~~~l~~~--~~dg~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAG--HVSGVITVHNVFS--KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TTEEEEEE--ETTSCEEEEETTT--CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred CCCEEEEE--cCCCeEEEEECCC--CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 45555544 3567789998865 223333322 222344455566665 5554 567899999998864 344433
No 172
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=26.38 E-value=97 Score=23.09 Aligned_cols=38 Identities=5% Similarity=-0.174 Sum_probs=23.5
Q ss_pred EEEeccccccccCCCCCCCCCCCCCCceeeEEEec-----cCCCCCeEEEEEe
Q 036281 126 NLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGL-----DLVTGDFKLVLIL 173 (371)
Q Consensus 126 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~-----d~~~~~ykvv~~~ 173 (371)
+++||.+++|...-... ...+.+.+ |...+.|+|+...
T Consensus 23 m~~D~~~~~W~p~~~g~----------ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 23 MTRDDSSGGWFPQEGGG----------ISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEECTTSSSSEECSCCS----------CEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred eeEcCCCCCEeeCCCCC----------cccEEEEEecCCCCCCCCEEEEEEEE
Confidence 88999998875443322 12233333 4456799999875
No 173
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=25.94 E-value=2.9e+02 Score=23.16 Aligned_cols=199 Identities=7% Similarity=-0.020 Sum_probs=0.0
Q ss_pred EeeecceEEEee-----cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCC--CCeEEEEEeeEecCCCC
Q 036281 109 IGPYDGIFCLLK-----SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVT--GDFKLVLILTLWNDQRD 181 (371)
Q Consensus 109 ~~s~~GLl~~~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~--~~ykvv~~~~~~~~~~~ 181 (371)
....+..++... +..+ .|||..+++...+-.... ......+.+.+.. +.+-+.+-.
T Consensus 26 ~~p~~~~l~~~~s~~~~d~~v-~iw~~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~~l~~~~~-------- 88 (357)
T 3i2n_A 26 WVPCSAKFVTMGNFARGTGVI-QLYEIQHGDLKLLREIEK--------AKPIKCGTFGATSLQQRYLATGDF-------- 88 (357)
T ss_dssp ECTTSSEEEEEEC--CCCEEE-EEEEECSSSEEEEEEEEE--------SSCEEEEECTTCCTTTCCEEEEET--------
T ss_pred EcCCCceEEEecCccCCCcEE-EEEeCCCCcccceeeecc--------cCcEEEEEEcCCCCCCceEEEecC--------
Q ss_pred CCCCcceEEEEEcCCCc--eeecCccccccceecc-ccceEEECceEEEEEecCCCCcEEEEEECCCce--EEEeCCCCC
Q 036281 182 SFHDFSHVAVYNFSTNS--WRDLKGFEMRFDYMVD-RIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV--FQEIKGPSV 256 (371)
Q Consensus 182 ~~~~~~~~~vy~~~~~~--Wr~~~~~~~~~~~~~~-~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~--~~~i~~P~~ 256 (371)
.-.+.+|+..++. -............... ..-...-+|..-..+..+ ..|..+|+.+.+ ...+.....
T Consensus 89 ----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 89 ----GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD---GTVKVWDPRQKDDPVANMEPVQG 161 (357)
T ss_dssp ----TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT---SCEEEECTTSCSSCSEEECCCTT
T ss_pred ----CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC---CeEEEEeCCCCCCcceeccccCC
Q ss_pred CCCCcccccCCCcceEEE------eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEe---eCCEEEE
Q 036281 257 PQTTTYYQSVKTPWMLGT------YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFW---RKDEFLL 327 (371)
Q Consensus 257 ~~~~~~~~~~~~~~~L~~------~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~---~~~~il~ 327 (371)
... ....-+. .+|.+.+.. .....+.+|-+ ..-...........+......- .++.++.
T Consensus 162 ~~~--------~~v~~~~~~~~~~~~~~~l~~~--~~d~~i~i~d~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 162 ENK--------RDCWTVAFGNAYNQEERVVCAG--YDNGDIKLFDL--RNMALRWETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp SCC--------CCEEEEEEECCCC-CCCEEEEE--ETTSEEEEEET--TTTEEEEEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred CCC--------CceEEEEEEeccCCCCCEEEEE--ccCCeEEEEEC--ccCceeeecCCCCceEEEEcCCCCCCCCEEEE
Q ss_pred EEcCCeEEEEeCCCCe
Q 036281 328 ESSDKRVILYDSRYHE 343 (371)
Q Consensus 328 ~~~~~~l~~yd~~~~~ 343 (371)
...++.+.+||+++++
T Consensus 230 ~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 230 TSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EESTTEEEEEEEEEEE
T ss_pred ECCCCeEEEEeCcCCC
No 174
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=25.76 E-value=3.2e+02 Score=23.50 Aligned_cols=107 Identities=8% Similarity=-0.009 Sum_probs=54.9
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeC-
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKG- 298 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~- 298 (371)
+|.+||.... ...|..+|+....-..+. ..... ....++. .+|.|+.... .... .|+...-
T Consensus 90 ~g~ly~~d~~---~~~I~~~~~dG~~~~~l~-~~~~~---------~P~giavdp~~g~ly~td~-~~~~--~I~r~~~d 153 (318)
T 3sov_A 90 GEKLYWTDSE---TNRIEVSNLDGSLRKVLF-WQELD---------QPRAIALDPSSGFMYWTDW-GEVP--KIERAGMD 153 (318)
T ss_dssp TTEEEEEETT---TTEEEEEETTSCSCEEEE-CSSCS---------SEEEEEEEGGGTEEEEEEC-SSSC--EEEEEETT
T ss_pred CCeEEEEECC---CCEEEEEECCCCcEEEEE-eCCCC---------CccEEEEeCCCCEEEEEec-CCCC--EEEEEEcC
Confidence 6899998754 358999998765433331 11111 1122333 4577766542 1223 3444443
Q ss_pred CceeEEEEecCCCcceee--eEEee-CCEEEEEE-cCCeEEEEeCCCCeEEEE
Q 036281 299 GFWIKHLTFGPFIETYQP--LGFWR-KDEFLLES-SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 299 ~~W~~~~~i~~~~~~~~~--~~~~~-~~~il~~~-~~~~l~~yd~~~~~~~~v 347 (371)
.+-.+.. +. ..+..| +++.. ++.|++.. ....+..+|+..+..+.+
T Consensus 154 G~~~~~~-~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 154 GSSRFII-IN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp SCSCEEE-EC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCeEEE-EE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 2222211 11 124444 45553 56677764 356788888876554444
No 175
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=25.53 E-value=3.6e+02 Score=24.05 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=25.0
Q ss_pred eeeeEEe---eCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 314 YQPLGFW---RKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 314 ~~~~~~~---~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
..|+++. +-|-|++.++.+-+++||++|++.-
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 4566653 3667888899999999999999863
No 176
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=25.42 E-value=4.2e+02 Score=24.78 Aligned_cols=198 Identities=8% Similarity=-0.012 Sum_probs=95.6
Q ss_pred cceEEEee--cCCceEEEeccccccc-cCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceE
Q 036281 113 DGIFCLLK--SHTLINLWNVSLNEYR-GLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHV 189 (371)
Q Consensus 113 ~GLl~~~~--~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 189 (371)
+|.+++.. +..+ .|+|+.|++.. .++... . ..++.++|.. .|-.+. .. .-.+
T Consensus 148 ~~~~~vs~~~d~~V-~v~D~~t~~~~~~i~~g~---------~--~~~v~~spdg-~~l~v~-~~-----------d~~V 202 (543)
T 1nir_A 148 PNLFSVTLRDAGQI-ALVDGDSKKIVKVIDTGY---------A--VHISRMSASG-RYLLVI-GR-----------DARI 202 (543)
T ss_dssp GGEEEEEEGGGTEE-EEEETTTCCEEEEEECST---------T--EEEEEECTTS-CEEEEE-ET-----------TSEE
T ss_pred CCEEEEEEcCCCeE-EEEECCCceEEEEEecCc---------c--cceEEECCCC-CEEEEE-CC-----------CCeE
Confidence 66666555 3445 99999998754 333211 1 2455666543 332222 10 2457
Q ss_pred EEEEc--CCCceeecCccccccceeccccceE-EE-----CceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCC
Q 036281 190 AVYNF--STNSWRDLKGFEMRFDYMVDRIYNV-YL-----NGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTT 260 (371)
Q Consensus 190 ~vy~~--~~~~Wr~~~~~~~~~~~~~~~~~~v-~~-----~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~ 260 (371)
.+|+. .++. .+... +... ....+ +. +|..-+.+... ...|..+|..+.+. ..++.+.....
T Consensus 203 ~v~D~~~~t~~--~~~~i----~~g~-~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t~~~~~~i~~~g~~~~- 272 (543)
T 1nir_A 203 DMIDLWAKEPT--KVAEI----KIGI-EARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGETLEPKQIVSTRGMTVD- 272 (543)
T ss_dssp EEEETTSSSCE--EEEEE----ECCS-EEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTTCCEEEEEECCEECSS-
T ss_pred EEEECcCCCCc--EEEEE----ecCC-CcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccccccceeecccCcccC-
Confidence 88888 4432 22111 1100 01112 22 56543333321 24788999887654 44554321100
Q ss_pred cccccCC-CcceEEEe-CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-E-cCCeEEE
Q 036281 261 TYYQSVK-TPWMLGTY-DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-S-SDKRVIL 336 (371)
Q Consensus 261 ~~~~~~~-~~~~L~~~-~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~-~~~~l~~ 336 (371)
...|... ....+... +|...++.. .....+.+|-+.+..-.+...|. .....+-+++..+|+.++. . .++.+.+
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~-~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNV-KETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEE-TTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred ccccccCCceEEEEECCCCCEEEEEE-CCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 0001111 12233332 244444332 45677777776652112222332 2223344677778885554 3 4678999
Q ss_pred EeCCCCeEEEE
Q 036281 337 YDSRYHEMRDL 347 (371)
Q Consensus 337 yd~~~~~~~~v 347 (371)
+|.+++++...
T Consensus 351 ~D~~tg~l~~~ 361 (543)
T 1nir_A 351 IDSKDRRLSAL 361 (543)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCeEEEe
Confidence 99999987554
No 177
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=24.87 E-value=3.1e+02 Score=22.99 Aligned_cols=145 Identities=7% Similarity=-0.020 Sum_probs=67.9
Q ss_pred cceEEEEEcCCCceeecCccccc-cceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEE-EeCCCCCCCCCccc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMR-FDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQ-EIKGPSVPQTTTYY 263 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~-~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~-~i~~P~~~~~~~~~ 263 (371)
.-.+.+++..++.....-..... .+. .-.+.-+|...+.+... ...|..+|+.+.+.. .+..+.....
T Consensus 20 ~~~v~~~d~~~~~~~~~~~~~~~~~~~----~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~~~~~~~~~~~~~---- 89 (349)
T 1jmx_B 20 PNNLHVVDVASDTVYKSCVMPDKFGPG----TAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTFHANLSSVPGE---- 89 (349)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSSC----EEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEESCCSTTE----
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCc----eeEECCCCCEEEEEeCC--CCcEEEEeCCCCcEEEEEEccccccc----
Confidence 45677888887654322111000 011 11122356544444332 357999999876653 4555432100
Q ss_pred ccCCCcceEEE-eCCeEEEEec-C---------CCCCEEEEEEeeC---CceeEEEEecCCCcceeeeEEeeCCEEEEEE
Q 036281 264 QSVKTPWMLGT-YDDCLSLLYS-D---------KFAHSFELWIMKG---GFWIKHLTFGPFIETYQPLGFWRKDEFLLES 329 (371)
Q Consensus 264 ~~~~~~~~L~~-~~g~L~l~~~-~---------~~~~~~~iW~L~~---~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~ 329 (371)
.......+.. -+|+..++.. . .....+.+|-++. ..-...... +. ...-+.+.++|++++ .
T Consensus 90 -~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~--~~~~~~~s~dg~l~~-~ 164 (349)
T 1jmx_B 90 -VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PR--QVYLMRAADDGSLYV-A 164 (349)
T ss_dssp -EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CS--SCCCEEECTTSCEEE-E
T ss_pred -ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CC--cccceeECCCCcEEE-c
Confidence 0000112222 3555444331 0 1136788887765 111111111 11 122345667888555 3
Q ss_pred cCCeEEEEeCCCCeEEE
Q 036281 330 SDKRVILYDSRYHEMRD 346 (371)
Q Consensus 330 ~~~~l~~yd~~~~~~~~ 346 (371)
+..+..||+++++...
T Consensus 165 -~~~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 165 -GPDIYKMDVKTGKYTV 180 (349)
T ss_dssp -SSSEEEECTTTCCEEE
T ss_pred -cCcEEEEeCCCCceec
Confidence 3449999999887654
No 178
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=24.82 E-value=3.3e+02 Score=23.39 Aligned_cols=112 Identities=11% Similarity=-0.008 Sum_probs=0.0
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCC---C---CCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEE
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGP---S---VPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWI 295 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P---~---~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~ 295 (371)
+| +.++... ...|..+|+.+.+....--. . .... .......-+..|+....+.....+.||-
T Consensus 197 ~~--~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i--------~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 197 RG--LIATGFN--NGTVQISELSTLRPLYNFESQHSMINNSNSI--------RSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp TS--EEEEECT--TSEEEEEETTTTEEEEEEECCC---CCCCCE--------EEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred Cc--eEEEEeC--CCcEEEEECCCCceeEEEeccccccccCCcc--------ceEEECCCCCEEEEEecCCCCceEEEEE
Q ss_pred eeCCceeEEEEecC-------------CCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 296 MKGGFWIKHLTFGP-------------FIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 296 L~~~~W~~~~~i~~-------------~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
+ ........+.. ...-..-+.+.+++.+++. ..++.+.+||+++++....
T Consensus 265 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 328 (397)
T 1sq9_A 265 T--EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITT 328 (397)
T ss_dssp T--TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred C--CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEE
No 179
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=24.78 E-value=3.5e+02 Score=23.59 Aligned_cols=103 Identities=9% Similarity=-0.017 Sum_probs=56.2
Q ss_pred cEEEEEECCCceEEE-eCCCCCCCCCcccccCCCcceEE-EeCCeEEEEec-CCCCCEEEEEEeeC-CceeEEEEecCCC
Q 036281 236 KAILAFSMSNEVFQE-IKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYS-DKFAHSFELWIMKG-GFWIKHLTFGPFI 311 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~-~~~~~~~~iW~L~~-~~W~~~~~i~~~~ 311 (371)
..|..+|+.+.+... +....... ....+. .-+|++.+... ......+.||-+.. ..-.....+....
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 268 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGT---------RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS 268 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSS---------SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS
T ss_pred CcEEEEeCCCCceeeeeccCCCCC---------cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC
Confidence 478999998865432 21111111 112222 24566655431 13678899999876 2212223332222
Q ss_pred cceeeeEEeeCCEEEE-EE-cCCeEEEEeCCCCe--EEEEE
Q 036281 312 ETYQPLGFWRKDEFLL-ES-SDKRVILYDSRYHE--MRDLG 348 (371)
Q Consensus 312 ~~~~~~~~~~~~~il~-~~-~~~~l~~yd~~~~~--~~~v~ 348 (371)
. ..-+.+..++..++ .. .++.+.+||+++++ +..+.
T Consensus 269 ~-v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 269 G-VLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp S-CEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred c-eeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 2 23345566776654 44 47889999999887 55553
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=24.73 E-value=4.8e+02 Score=25.18 Aligned_cols=112 Identities=12% Similarity=0.046 Sum_probs=59.0
Q ss_pred ceEEEEEecCCCCcEEEEEECCCc---eEEEeCCCCCCCCCcccccCCCcceEEEe-CCeEEEEecCCCCCEEEEEEee-
Q 036281 223 GYCYWVVCRPDYSKAILAFSMSNE---VFQEIKGPSVPQTTTYYQSVKTPWMLGTY-DDCLSLLYSDKFAHSFELWIMK- 297 (371)
Q Consensus 223 G~lywl~~~~~~~~~Il~fD~~~e---~~~~i~~P~~~~~~~~~~~~~~~~~L~~~-~g~L~l~~~~~~~~~~~iW~L~- 297 (371)
+.+|+.+..+.....|...|+.+. .|+.+-.+... . ....+... ++.|.+... ......||+++
T Consensus 298 ~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~--------~~~~~~~~~~~~lv~~~~--~~g~~~l~~~~~ 366 (710)
T 2xdw_A 298 TVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK-D--------VLEWVACVRSNFLVLCYL--HDVKNTLQLHDL 366 (710)
T ss_dssp TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-C--------EEEEEEEETTTEEEEEEE--ETTEEEEEEEET
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC-C--------eEEEEEEEcCCEEEEEEE--ECCEEEEEEEEC
Confidence 467777654433567999999874 46655322211 1 11123334 777777553 33445566554
Q ss_pred -CCceeEEEEecCCCcceeeeEEeeCC-EEEEEEc----CCeEEEEeCCCCe--EEEE
Q 036281 298 -GGFWIKHLTFGPFIETYQPLGFWRKD-EFLLESS----DKRVILYDSRYHE--MRDL 347 (371)
Q Consensus 298 -~~~W~~~~~i~~~~~~~~~~~~~~~~-~il~~~~----~~~l~~yd~~~~~--~~~v 347 (371)
+.. ....+.........++...++ .+++... ...++.||+++++ .+.+
T Consensus 367 ~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l 422 (710)
T 2xdw_A 367 ATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVF 422 (710)
T ss_dssp TTCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEE
T ss_pred CCCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEe
Confidence 222 233443222222233333444 5666532 4679999998877 5544
No 181
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=24.52 E-value=3.1e+02 Score=22.94 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=55.6
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCe-EEEEecCC---CCCEEEEEEeeCCceeEEEEe-cC
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDC-LSLLYSDK---FAHSFELWIMKGGFWIKHLTF-GP 309 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~-L~l~~~~~---~~~~~~iW~L~~~~W~~~~~i-~~ 309 (371)
..|..+|..+.++..+. .... ...+.. -+|+ |++..... ....+.+|-++.........+ ..
T Consensus 169 ~~v~~~d~~~g~~~~~~---~~~~---------p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA---DLDH---------PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp EEEEEECSSSCCCEEEE---EESS---------EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred CeEEEEcCCCCcEEEEe---cCCC---------CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 57999999887776653 1111 111222 3555 54443210 125566666654322211111 11
Q ss_pred CCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeEEEEEEec
Q 036281 310 FIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEMRDLGITG 351 (371)
Q Consensus 310 ~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~~v~~~~ 351 (371)
......-+.+..+|.|++.. ..++..||++.+.+..+....
T Consensus 237 ~~~~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~~ 277 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTPG 277 (305)
T ss_dssp SSSCCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECSS
T ss_pred CCCCCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECCC
Confidence 11122235666788877765 567999999988888876653
No 182
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=24.44 E-value=3.1e+02 Score=22.88 Aligned_cols=27 Identities=15% Similarity=0.033 Sum_probs=15.4
Q ss_pred eecceEEEeecCCceEEEeccccccccCC
Q 036281 111 PYDGIFCLLKSHTLINLWNVSLNEYRGLP 139 (371)
Q Consensus 111 s~~GLl~~~~~~~~~~V~NP~T~~~~~LP 139 (371)
..+|.|.+.... + +.+|+..+.....+
T Consensus 68 ~~~g~l~v~t~~-l-~~~d~~g~~~~~~~ 94 (330)
T 3hxj_A 68 GKDGTIYFGSDK-V-YAINPDGTEKWRFD 94 (330)
T ss_dssp TTTTEECCSSCE-E-EEECCCGGGGGGSC
T ss_pred ecCCcEEEecCc-E-EEECCCCcEEEEEE
Confidence 346776666555 5 88898433333333
No 183
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=24.25 E-value=4.3e+02 Score=24.41 Aligned_cols=64 Identities=6% Similarity=0.036 Sum_probs=38.7
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCC
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYH 342 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~ 342 (371)
+|++.+.. .....+.||-++... .....+..+..-..-+.+..++.|+....++.+.+||++++
T Consensus 552 ~~~~l~~~--~~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 552 EEDLVATG--SLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCCEEEEE--ETTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC--
T ss_pred CCCEEEEE--cCCCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCCeEEecCCceEEEEeeecC
Confidence 56666554 356799999997621 22333333333344566677888333456788999998763
No 184
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=23.91 E-value=4.4e+02 Score=24.45 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=54.8
Q ss_pred CcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceE-EEeCCeEEEEecC----CCCCEEEEEEeeCCceeEEEEec
Q 036281 235 SKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWML-GTYDDCLSLLYSD----KFAHSFELWIMKGGFWIKHLTFG 308 (371)
Q Consensus 235 ~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L-~~~~g~L~l~~~~----~~~~~~~iW~L~~~~W~~~~~i~ 308 (371)
...|..+|+.+.+- ..|+++..... + ....+ ..-+|+.+++.+. ....++.+|..++..|.....|+
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~------P-~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vId 299 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRM------A-LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIE 299 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEE------E-EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEE
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCc------c-ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEe
Confidence 46899999987643 45665422100 0 11111 1234555554321 14456666666667787776664
Q ss_pred CCC------------------cceeeeEEeeCCEEEEEE--cCCeEEEEeCC
Q 036281 309 PFI------------------ETYQPLGFWRKDEFLLES--SDKRVILYDSR 340 (371)
Q Consensus 309 ~~~------------------~~~~~~~~~~~~~il~~~--~~~~l~~yd~~ 340 (371)
... ....-+.+..||++|++. ..+.+.+||..
T Consensus 300 i~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 300 IPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp ECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred CCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 111 112235567789877765 35689999985
No 185
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=23.64 E-value=3.4e+02 Score=23.14 Aligned_cols=62 Identities=18% Similarity=0.206 Sum_probs=41.2
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeC
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDS 339 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~ 339 (371)
+|.+.+.. .....+.||-++...|.....+..+.....-+.+.++|..|+. ..++.+.+||.
T Consensus 161 ~~~~l~s~--s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 161 SQELLASA--SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSCEEEE--ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEE--eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 45544433 3567899999987778777776655434445666677776555 56777888885
No 186
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=23.55 E-value=3.7e+02 Score=23.40 Aligned_cols=192 Identities=14% Similarity=0.044 Sum_probs=95.7
Q ss_pred eeecceEEEee--cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcc
Q 036281 110 GPYDGIFCLLK--SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFS 187 (371)
Q Consensus 110 ~s~~GLl~~~~--~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 187 (371)
+..+|.|.+.+ ...+ ..+++.++....+...... ...|+++|+..+. ++... . ...
T Consensus 81 d~~~~~ly~~D~~~~~I-~r~~~~g~~~~~~~~~~~~---------~p~glavd~~~g~--ly~~d---~-------~~~ 138 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRI-LRANLNGSNVEEVVSTGLE---------SPGGLAVDWVHDK--LYWTD---S-------GTS 138 (349)
T ss_dssp ETTTTEEEEEETTTTEE-EEEETTSCSCEEEECSSCS---------CCCEEEEETTTTE--EEEEE---T-------TTT
T ss_pred eccccEEEEEeccCCce-EEEecCCCCceEEEeCCCC---------CccEEEEecCCCe--EEEEc---C-------CCC
Confidence 44567777666 2344 7888877654443222211 1156777765443 22221 0 134
Q ss_pred eEEEEEcCCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccc
Q 036281 188 HVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQ 264 (371)
Q Consensus 188 ~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~ 264 (371)
.+++++..+..-+.+... .+. ...++.+ +|.+||..... ...|..+|+....-..+- .....
T Consensus 139 ~I~~~~~dG~~~~~l~~~--~l~----~P~~iavdp~~g~ly~td~~~--~~~I~r~~~dG~~~~~~~-~~~~~------ 203 (349)
T 3v64_C 139 RIEVANLDGAHRKVLLWQ--SLE----KPRAIALHPMEGTIYWTDWGN--TPRIEASSMDGSGRRIIA-DTHLF------ 203 (349)
T ss_dssp EEEEEETTSCSCEEEECT--TCS----CEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCSCEESC-CSSCS------
T ss_pred eEEEEcCCCCceEEEEeC--CCC----CcceEEEecCcCeEEEeccCC--CCEEEEEeCCCCCcEEEE-ECCCC------
Confidence 677777765432222110 111 1123333 58999987543 368999998765443331 11111
Q ss_pred cCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEe-eCCEEEEEE-cCCeEEEEeCC
Q 036281 265 SVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFW-RKDEFLLES-SDKRVILYDSR 340 (371)
Q Consensus 265 ~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~~-~~~~l~~yd~~ 340 (371)
..-.|+. .+|+|++.. .....|...-++. .-.+.. +. . .+..|.++. .++.+++.. ..+.+..+|..
T Consensus 204 ---~PnGla~d~~~~~lY~aD--~~~~~I~~~~~dG-~~~~~~-~~-~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 204 ---WPNGLTIDYAGRRMYWVD--AKHHVIERANLDG-SHRKAV-IS-Q-GLPHPFAITVFEDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp ---CEEEEEEETTTTEEEEEE--TTTTEEEEEETTS-CSCEEE-EC-S-SCSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ---CcceEEEeCCCCEEEEEE--CCCCEEEEEeCCC-CceEEE-Ee-C-CCCCceEEEEECCEEEEecCCCCeEEEEEcc
Confidence 1122443 477887765 3445555444443 111111 11 1 134554433 356777775 46789999965
Q ss_pred CCe-EEEE
Q 036281 341 YHE-MRDL 347 (371)
Q Consensus 341 ~~~-~~~v 347 (371)
+++ .+.+
T Consensus 275 ~G~~~~~i 282 (349)
T 3v64_C 275 TGKNQEII 282 (349)
T ss_dssp TCCSCEEE
T ss_pred CCCccEEe
Confidence 554 3444
No 187
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=23.36 E-value=2.5e+02 Score=26.61 Aligned_cols=57 Identities=16% Similarity=0.254 Sum_probs=36.6
Q ss_pred CCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCC-CeE
Q 036281 287 FAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRY-HEM 344 (371)
Q Consensus 287 ~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~-~~~ 344 (371)
.+..+.||-++.......... .+..-..-+.+.++|++++. ..++.+.+||.++ ++.
T Consensus 468 ~D~~v~lwd~~~~~~~~~~~~-~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~ 526 (611)
T 1nr0_A 468 QDSKVHVYKLSGASVSEVKTI-VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL 526 (611)
T ss_dssp TTSEEEEEEEETTEEEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred CCCeEEEEEccCCceeeeecc-CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCce
Confidence 567899999986444333322 22223445677778887665 4677899999876 443
No 188
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=23.28 E-value=5.1e+02 Score=24.95 Aligned_cols=183 Identities=10% Similarity=0.043 Sum_probs=87.4
Q ss_pred EEEeecCCceEEEeccccccc-cCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEc
Q 036281 116 FCLLKSHTLINLWNVSLNEYR-GLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNF 194 (371)
Q Consensus 116 l~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~ 194 (371)
|+++....+ ...+.-+.+.. .+|-... ....++.||+..+. |++.- . ..-.+..++.
T Consensus 9 Ll~s~~~~I-~~i~l~~~~~~~~~~~~~~---------~~~~~l~~d~~~~~--lywtD---~-------~~~~I~r~~~ 66 (628)
T 4a0p_A 9 LLFSRRADI-RRISLETNNNNVAIPLTGV---------KEASALDFDVTDNR--IYWTD---I-------SLKTISRAFM 66 (628)
T ss_dssp EEEEETTEE-EEEESSCTTCEEECCCCSC---------SCEEEEEEETTTTE--EEEEE---T-------TTTEEEEEET
T ss_pred EEEEeCCcE-EEEECCCCCcceEEEcCCC---------CceEEEEEECCCCE--EEEEE---C-------CCCeEEEEEC
Confidence 444444444 55565554332 3443321 12378888876542 33321 0 0234555565
Q ss_pred CCCceeecCccccccceeccccceEEE---CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcce
Q 036281 195 STNSWRDLKGFEMRFDYMVDRIYNVYL---NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWM 271 (371)
Q Consensus 195 ~~~~Wr~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~ 271 (371)
.+...+.+-.. .+ ....++.+ +|.+||.... ...|..+|+....-..+-. .... ....
T Consensus 67 ~g~~~~~v~~~--g~----~~P~GlAvD~~~~~LY~tD~~---~~~I~v~~~dG~~~~~l~~-~~l~---------~P~~ 127 (628)
T 4a0p_A 67 NGSALEHVVEF--GL----DYPEGMAVDWLGKNLYWADTG---TNRIEVSKLDGQHRQVLVW-KDLD---------SPRA 127 (628)
T ss_dssp TSCSCEEEECS--SC----SCCCEEEEETTTTEEEEEETT---TTEEEEEETTSTTCEEEEC-SSCC---------CEEE
T ss_pred CCCCcEEEEeC--CC----CCcceEEEEeCCCEEEEEECC---CCEEEEEecCCCcEEEEEe-CCCC---------Cccc
Confidence 55444433211 11 12244555 5899997654 3689999987654333311 1111 1223
Q ss_pred EEE--eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEE--ee-CCEEEEEE-cCCeEEEEeCCCCeEE
Q 036281 272 LGT--YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGF--WR-KDEFLLES-SDKRVILYDSRYHEMR 345 (371)
Q Consensus 272 L~~--~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~--~~-~~~il~~~-~~~~l~~yd~~~~~~~ 345 (371)
|+. .+|.|+.... .....|...-|+... .... + ..+..|.++ .. +++|++.. ....+..+|+..+..+
T Consensus 128 iavdp~~G~lY~tD~-g~~~~I~r~~~dG~~-~~~l-~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~ 201 (628)
T 4a0p_A 128 LALDPAEGFMYWTEW-GGKPKIDRAAMDGSE-RTTL-V---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNRE 201 (628)
T ss_dssp EEEETTTTEEEEEEC-SSSCEEEEEETTSCS-CEEE-E---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred EEEccCCCeEEEeCC-CCCCEEEEEeCCCCc-eEEE-E---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceE
Confidence 443 4687777542 223444443343321 1111 1 124455443 33 45666664 3567888887665443
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=23.16 E-value=3.3e+02 Score=22.82 Aligned_cols=69 Identities=7% Similarity=0.002 Sum_probs=37.4
Q ss_pred eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcC-----CeEEEEeCCCCeEEEE
Q 036281 275 YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSD-----KRVILYDSRYHEMRDL 347 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~-----~~l~~yd~~~~~~~~v 347 (371)
-+|+|.+... ....+.+|-.+......... .......-+.+..+|++++.... ..++.||+++++.+.+
T Consensus 54 ~~g~l~~~~~--~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 54 RQGQLFLLDV--FEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TTSCEEEEET--TTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE
T ss_pred CCCCEEEEEC--CCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE
Confidence 4566665442 33455555443333322221 11112333455568888887543 4899999998887643
No 190
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=23.11 E-value=3.9e+02 Score=23.52 Aligned_cols=99 Identities=7% Similarity=0.069 Sum_probs=52.7
Q ss_pred cEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEec-CCCc
Q 036281 236 KAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFG-PFIE 312 (371)
Q Consensus 236 ~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~-~~~~ 312 (371)
..|..+|+.+.+. ..+..|.... ....+.. -+|.+.+.. .....+.||-+... .....+. ....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~---------~v~~~~~s~~~~~l~s~--~~dg~i~iwd~~~~--~~~~~~~~~~~~ 258 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHG---------AVSSICIDEECCVLILG--TTRGIIDIWDIRFN--VLIRSWSFGDHA 258 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGC---------CEEEEEECTTSCEEEEE--ETTSCEEEEETTTT--EEEEEEBCTTCE
T ss_pred CeEEEEeCCCCeeeEEEccCCCCC---------ceEEEEECCCCCEEEEE--cCCCeEEEEEcCCc--cEEEEEecCCCC
Confidence 5788999987654 3444432111 1122222 356655544 35678999988752 2233332 1111
Q ss_pred ceeeeEE----eeCCEEEEEE-cCCeEEEEeCCCCeEEEE
Q 036281 313 TYQPLGF----WRKDEFLLES-SDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 313 ~~~~~~~----~~~~~il~~~-~~~~l~~yd~~~~~~~~v 347 (371)
-..-+.+ ..++.+++.. .++.+.+||+++++....
T Consensus 259 ~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 1111211 1356666654 466799999998875444
No 191
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=23.10 E-value=3.1e+02 Score=22.37 Aligned_cols=107 Identities=13% Similarity=0.055 Sum_probs=54.3
Q ss_pred CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE--eCCeEEEEecCCCCCEEEEEEeeCC
Q 036281 222 NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT--YDDCLSLLYSDKFAHSFELWIMKGG 299 (371)
Q Consensus 222 ~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~--~~g~L~l~~~~~~~~~~~iW~L~~~ 299 (371)
+|.+||.... ...|..+|+....-..+. +.... ....++. .+|.|++.. .....+.+.-++..
T Consensus 47 ~~~ly~~d~~---~~~I~~~~~~g~~~~~~~-~~~~~---------~p~~ia~d~~~~~lyv~d--~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 47 DKVVYWTDIS---EPSIGRASLHGGEPTTII-RQDLG---------SPEGIALDHLGRTIFWTD--SQLDRIEVAKMDGT 111 (267)
T ss_dssp TTEEEEEETT---TTEEEEEESSSCCCEEEE-CTTCC---------CEEEEEEETTTTEEEEEE--TTTTEEEEEETTSC
T ss_pred CCEEEEEECC---CCEEEEEecCCCCcEEEE-ECCCC---------CccEEEEEecCCeEEEEE--CCCCEEEEEEcCCC
Confidence 4799998754 358999999876443321 21111 1122333 256777655 24455555444431
Q ss_pred ceeEEEEecCCCcceee--eEEee-CCEEEEEEc---CCeEEEEeCCCCeEEEE
Q 036281 300 FWIKHLTFGPFIETYQP--LGFWR-KDEFLLESS---DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 300 ~W~~~~~i~~~~~~~~~--~~~~~-~~~il~~~~---~~~l~~yd~~~~~~~~v 347 (371)
..+.. +. . ....| +++.. ++.+++... ...+..+++..+..+.+
T Consensus 112 -~~~~~-~~-~-~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 112 -QRRVL-FD-T-GLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp -SCEEE-EC-S-SCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred -CEEEE-EE-C-CCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 11111 11 1 12233 44554 566766653 24677777765544433
No 192
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=22.99 E-value=3.6e+02 Score=23.16 Aligned_cols=90 Identities=7% Similarity=-0.047 Sum_probs=48.7
Q ss_pred cEEEEEECCCceEE-EeCCCCCCCCCcccccCCCcceEE-EeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcc
Q 036281 236 KAILAFSMSNEVFQ-EIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~ 313 (371)
..|-.+|+.+.+-. .+....... ....+. ..+|.+.+.. .....+.||-+.. ......+..+..-
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~---------~~~~~~~s~~g~~l~~g--~~d~~i~vwd~~~--~~~~~~l~~h~~~ 328 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIF---------GASSVDFSLSGRLLFAG--YNDYTINVWDVLK--GSRVSILFGHENR 328 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCS---------CEEEEEECTTSSEEEEE--ETTSCEEEEETTT--CSEEEEECCCSSC
T ss_pred CeEEEEECCCCcEEEEEcCCCccc---------ceeEEEEeCCCCEEEEE--ECCCcEEEEECCC--CceEEEEECCCCc
Confidence 46788898876432 222111111 111222 2456666655 3567899998854 2233444333333
Q ss_pred eeeeEEeeCCEEEEE-EcCCeEEEEe
Q 036281 314 YQPLGFWRKDEFLLE-SSDKRVILYD 338 (371)
Q Consensus 314 ~~~~~~~~~~~il~~-~~~~~l~~yd 338 (371)
..-+.+.++|..|+. ..++.+.+||
T Consensus 329 v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 329 VSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCCEEecC
Confidence 445666677876555 5577777775
No 193
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=22.68 E-value=5.3e+02 Score=24.98 Aligned_cols=66 Identities=11% Similarity=0.136 Sum_probs=35.6
Q ss_pred CCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee--CCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 276 DDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR--KDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 276 ~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~--~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
+|.+.+.. .....+.+|-+....-...... ....-..-+.+.. ++..++. ..++.+.+||.++++.
T Consensus 152 ~~~~l~~~--~~dg~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 152 DPSTFASG--CLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp EEEEEEEE--ETTSEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CCCEEEEE--eCCCeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 34444444 3567899998876211111111 1111122234333 5655554 5677899999988874
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=22.65 E-value=3.3e+02 Score=22.51 Aligned_cols=193 Identities=8% Similarity=0.013 Sum_probs=91.7
Q ss_pred cCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCcee
Q 036281 121 SHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWR 200 (371)
Q Consensus 121 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr 200 (371)
...+ +++||.+++...+..+.... . .....++.+++..+. +..... ...+.+|+.. +..+
T Consensus 45 ~~~i-~~~d~~~g~~~~~~~~~~~~--~---~~~~~~i~~~~~~g~--l~v~~~-----------~~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 45 AGEI-LRIDLKTGKKTVICKPEVNG--Y---GGIPAGCQCDRDANQ--LFVADM-----------RLGLLVVQTD-GTFE 104 (314)
T ss_dssp CCEE-EEECTTTCCEEEEECCEETT--E---ECCEEEEEECSSSSE--EEEEET-----------TTEEEEEETT-SCEE
T ss_pred CCEE-EEEeCCCCcEEEEEecccCC--C---CCCCceEEEecCCCc--EEEEEC-----------CCCEEEEeCC-CCEE
Confidence 3456 89999888876553311000 0 112256666654222 222210 1256778877 6655
Q ss_pred ec-CccccccceeccccceEEE--CceEEEEEecCC------------CCcEEEEEECCCceEEEeCCCCCCCCCccccc
Q 036281 201 DL-KGFEMRFDYMVDRIYNVYL--NGYCYWVVCRPD------------YSKAILAFSMSNEVFQEIKGPSVPQTTTYYQS 265 (371)
Q Consensus 201 ~~-~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~------------~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~ 265 (371)
.. .......+. .....+.+ +|.+|+-..... ....|..+|.. .++..+... ..
T Consensus 105 ~~~~~~~~~~~~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~------- 172 (314)
T 1pjx_A 105 EIAKKDSEGRRM--QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ------- 172 (314)
T ss_dssp ECCSBCTTSCBC--BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES-------
T ss_pred EEEeccCCCccc--cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC--CC-------
Confidence 44 211001110 11123433 577765543210 01478889887 555443110 00
Q ss_pred CCCcceEE-E----eCC-eEEEEecCCCCCEEEEEEee-CCceeEEEEec--CCC--cceeeeEEeeCCEEEEEE-cCCe
Q 036281 266 VKTPWMLG-T----YDD-CLSLLYSDKFAHSFELWIMK-GGFWIKHLTFG--PFI--ETYQPLGFWRKDEFLLES-SDKR 333 (371)
Q Consensus 266 ~~~~~~L~-~----~~g-~L~l~~~~~~~~~~~iW~L~-~~~W~~~~~i~--~~~--~~~~~~~~~~~~~il~~~-~~~~ 333 (371)
....+. . -+| .|.+.. .....+.+|-++ +........+. +.. ....-+++..+|.+++.. ..+.
T Consensus 173 --~~~~i~~~~~~d~dg~~l~v~~--~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 173 --FPNGIAVRHMNDGRPYQLIVAE--TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp --SEEEEEEEECTTSCEEEEEEEE--TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred --CcceEEEecccCCCCCEEEEEE--CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 011122 2 345 344443 345677777765 23332221111 111 122335556688888875 5678
Q ss_pred EEEEeCCCCe-EEEEEE
Q 036281 334 VILYDSRYHE-MRDLGI 349 (371)
Q Consensus 334 l~~yd~~~~~-~~~v~~ 349 (371)
+..||+++++ .+.+..
T Consensus 249 i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp EEEECTTCBSCSEEEEC
T ss_pred EEEEcCCCCcEeEEEeC
Confidence 9999999554 344443
No 195
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=22.64 E-value=5.1e+02 Score=24.78 Aligned_cols=95 Identities=14% Similarity=0.144 Sum_probs=57.1
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcce
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETY 314 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~ 314 (371)
..|..+|+.+.+....- ..... ....+.. -+|++.+.. .....+.||-+... .....+.... ..
T Consensus 541 ~~v~vwd~~~~~~~~~~-~~h~~---------~v~~v~~spdg~~l~sg--~~Dg~i~iwd~~~~--~~~~~~~~~~-~v 605 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL-AGHTG---------YVSTVAVSPDGSLCASG--GKDGVVLLWDLAEG--KKLYSLEANS-VI 605 (694)
T ss_dssp SCEEEEETTTCCEEEEE-CCCSS---------CEEEEEECTTSSEEEEE--ETTSBCEEEETTTT--EEEECCBCSS-CE
T ss_pred CeEEEEECCCCcEEEEE-cCCCC---------CEEEEEEeCCCCEEEEE--eCCCeEEEEECCCC--ceEEEecCCC-cE
Confidence 46888888876553321 11111 1222332 356666654 36788999988752 2333332222 34
Q ss_pred eeeEEeeCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 315 QPLGFWRKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 315 ~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
.-+++.+++.++....+..+.+||+++++..
T Consensus 606 ~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATEHGIKIWDLESKSIV 636 (694)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred EEEEEcCCCcEEEEEcCCCEEEEECCCCCCh
Confidence 4566677888888777888999999998754
No 196
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=22.63 E-value=3.8e+02 Score=23.23 Aligned_cols=72 Identities=17% Similarity=0.053 Sum_probs=40.9
Q ss_pred eCCeEEEEecCCCC--CEEEEEEeeCCceeE--EEEecCCCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCeEEE
Q 036281 275 YDDCLSLLYSDKFA--HSFELWIMKGGFWIK--HLTFGPFIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHEMRD 346 (371)
Q Consensus 275 ~~g~L~l~~~~~~~--~~~~iW~L~~~~W~~--~~~i~~~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~~~~ 346 (371)
-+|+..+....... ..+.+|-+....+.. ...+.....-..-+++.++|++|.. ..++.+.+||.++++...
T Consensus 229 pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~ 305 (365)
T 4h5i_A 229 ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSK 305 (365)
T ss_dssp ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEE
Confidence 46666664421222 356666666522222 2233233222344667788887765 567889999999987543
No 197
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=22.50 E-value=4.1e+02 Score=23.59 Aligned_cols=185 Identities=9% Similarity=-0.012 Sum_probs=88.9
Q ss_pred CceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeec
Q 036281 123 TLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDL 202 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~ 202 (371)
.+ .++|..+++.+.|..... . ...+.+.|.. .+ ++.... + .....+.+++..++..+.+
T Consensus 160 ~i-~i~d~~g~~~~~l~~~~~--------~--v~~~~~Spdg-~~-la~~s~---~-----~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 160 EL-RVSDYDGYNQFVVHRSPQ--------P--LMSPAWSPDG-SK-LAYVTF---E-----SGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp EE-EEEETTSCSCEEEEEESS--------C--EEEEEECTTS-SE-EEEEEC---T-----TSSCEEEEEETTTCCEEEE
T ss_pred eE-EEEcCCCCCCEEEeCCCC--------c--ceeeEEcCCC-CE-EEEEEe---c-----CCCcEEEEEECCCCcEEEe
Confidence 45 999987665554432211 1 2444555543 22 222221 1 0145788999988876655
Q ss_pred CccccccceeccccceEEECce-EEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEE
Q 036281 203 KGFEMRFDYMVDRIYNVYLNGY-CYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLS 280 (371)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~ 280 (371)
.... . .. ......-+|. +.+....+ ....|..+|+.+.+...+.... . ....+. .-+|+..
T Consensus 219 ~~~~-~-~~---~~~~~spdg~~la~~~~~~-g~~~i~~~d~~~~~~~~l~~~~--~---------~~~~~~~spdg~~l 281 (415)
T 2hqs_A 219 ASFP-R-HN---GAPAFSPDGSKLAFALSKT-GSLNLYVMDLASGQIRQVTDGR--S---------NNTEPTWFPDSQNL 281 (415)
T ss_dssp ECCS-S-CE---EEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEEECCCCS--S---------CEEEEEECTTSSEE
T ss_pred ecCC-C-cc---cCEEEcCCCCEEEEEEecC-CCceEEEEECCCCCEEeCcCCC--C---------cccceEECCCCCEE
Confidence 3221 0 00 0011122464 44444322 2346889999887765542211 1 111222 2356644
Q ss_pred EEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEE-EEc---CCeEEEEeCCCCeEEEE
Q 036281 281 LLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLL-ESS---DKRVILYDSRYHEMRDL 347 (371)
Q Consensus 281 l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~-~~~---~~~l~~yd~~~~~~~~v 347 (371)
++.. .......||+++-..-. ...+........-+.+..+|+.++ ... ...+..+|+++++.+.+
T Consensus 282 ~~~s-~~~g~~~i~~~d~~~~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 282 AFTS-DQAGRPQVYKVNINGGA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEE-CTTSSCEEEEEETTSSC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEE-CCCCCcEEEEEECCCCC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 4332 12233456666541111 122222222223345556776544 433 25799999999988655
No 198
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=22.46 E-value=4.1e+02 Score=23.56 Aligned_cols=199 Identities=8% Similarity=-0.014 Sum_probs=0.0
Q ss_pred ceEEEeecCCceEEEeccc---cccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEE
Q 036281 114 GIFCLLKSHTLINLWNVSL---NEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVA 190 (371)
Q Consensus 114 GLl~~~~~~~~~~V~NP~T---~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 190 (371)
|+|+.....+.+.||+..+ .....-+....... ......+.+.|..+.+-+.+-. .-.+.
T Consensus 195 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h-----~~~v~~v~~~p~~~~~l~s~~~------------dg~i~ 257 (430)
T 2xyi_A 195 GYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGH-----TAVVEDVAWHLLHESLFGSVAD------------DQKLM 257 (430)
T ss_dssp TEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCC-----SSCEEEEEECSSCTTEEEEEET------------TSEEE
T ss_pred CeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCC-----CCCEeeeEEeCCCCCEEEEEeC------------CCeEE
Q ss_pred EEEcCCCc-eeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCc
Q 036281 191 VYNFSTNS-WRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTP 269 (371)
Q Consensus 191 vy~~~~~~-Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~ 269 (371)
+|+.+++. .+.+... .........-...-+|.....+... ...|..+|+.+..-....+...... -.
T Consensus 258 i~d~~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~~~h~~~--------v~ 325 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTV--DAHTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSFESHKDE--------IF 325 (430)
T ss_dssp EEETTCSCSSSCSEEE--ECCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEEECCSSC--------EE
T ss_pred EEECCCCCCCcceeEe--ecCCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEeecCCCC--------EE
Q ss_pred ceEEEeCCeEEEEecCCCCCEEEEEEeeC--Cce----------eEEEEecCCCcceeeeEEeeCCE-EEEE-EcCCeEE
Q 036281 270 WMLGTYDDCLSLLYSDKFAHSFELWIMKG--GFW----------IKHLTFGPFIETYQPLGFWRKDE-FLLE-SSDKRVI 335 (371)
Q Consensus 270 ~~L~~~~g~L~l~~~~~~~~~~~iW~L~~--~~W----------~~~~~i~~~~~~~~~~~~~~~~~-il~~-~~~~~l~ 335 (371)
..-..-+|+-.++.. .....+.||-+.. ..- ........+.....-+.+.+++. +++. ..++.+.
T Consensus 326 ~i~~sp~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~ 404 (430)
T 2xyi_A 326 QVQWSPHNETILASS-GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQ 404 (430)
T ss_dssp EEEECSSCTTEEEEE-ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEE
T ss_pred EEEECCCCCCEEEEE-eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEE
Q ss_pred EEeCCCC
Q 036281 336 LYDSRYH 342 (371)
Q Consensus 336 ~yd~~~~ 342 (371)
+|++.++
T Consensus 405 iw~~~~~ 411 (430)
T 2xyi_A 405 VWQMAEN 411 (430)
T ss_dssp EEEECHH
T ss_pred EeEcccc
No 199
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=22.43 E-value=1.1e+02 Score=24.18 Aligned_cols=37 Identities=3% Similarity=0.038 Sum_probs=25.9
Q ss_pred EEEecccc-ccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEe
Q 036281 126 NLWNVSLN-EYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLIL 173 (371)
Q Consensus 126 ~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~ 173 (371)
++.||.|+ +|...-... ..+.+.+|...+.|+|+.+.
T Consensus 19 m~~D~~tk~~WvP~g~~~-----------~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 19 FQIDPNTKKNWVPTSKHA-----------VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEECTTSSCCSEESCSSC-----------EEEEEEEETTTTEEEEEEEE
T ss_pred EEECCCCCCceeecCCCC-----------eEEEEEEcCCCCEEEEEEcc
Confidence 88999997 785432221 23666788888899999864
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=22.26 E-value=4.6e+02 Score=24.14 Aligned_cols=94 Identities=9% Similarity=0.086 Sum_probs=53.3
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecC-CCcc
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGP-FIET 313 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~-~~~~ 313 (371)
..|..+|+.+.+.....+..... ....+.. -+|++.+.. .....+.||-++. ......+.. +..-
T Consensus 467 ~~i~~~~~~~~~~~~~~~~~~~~---------~v~~~~~s~~g~~l~~~--~~dg~i~iw~~~~--~~~~~~~~~~h~~~ 533 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSFDLKTPLRA---------KPSYISISPSETYIAAG--DVMGKILLYDLQS--REVKTSRWAFRTSK 533 (615)
T ss_dssp SCEEEEETTEEEEEEECSSCCSS---------CEEEEEECTTSSEEEEE--ETTSCEEEEETTT--TEEEECCSCCCSSC
T ss_pred CeEEEEECCCccccccccCCccC---------ceEEEEECCCCCEEEEc--CCCCeEEEeeCCC--CcceeEeecCCCCc
Confidence 36788888877654322222111 1222332 366655544 3567899999875 233333322 3323
Q ss_pred eeeeEEee----------CCEEEEE-EcCCeEEEEeCCCC
Q 036281 314 YQPLGFWR----------KDEFLLE-SSDKRVILYDSRYH 342 (371)
Q Consensus 314 ~~~~~~~~----------~~~il~~-~~~~~l~~yd~~~~ 342 (371)
..-+.+.+ ++++++. ..++.+.+||++++
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 34455555 7776665 56788999999986
No 201
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=22.01 E-value=3.4e+02 Score=22.42 Aligned_cols=34 Identities=18% Similarity=0.392 Sum_probs=23.1
Q ss_pred eeEEeeCCEEEEE-EcCCeEEEEeCCCC-eEEEEEE
Q 036281 316 PLGFWRKDEFLLE-SSDKRVILYDSRYH-EMRDLGI 349 (371)
Q Consensus 316 ~~~~~~~~~il~~-~~~~~l~~yd~~~~-~~~~v~~ 349 (371)
-+.+..++.+++. ..++.+.+||++++ .++.+..
T Consensus 311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 311 SVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp EEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEecCcCcchhheee
Confidence 3455567775555 56788999999886 4565543
No 202
>1q67_A Decapping protein involved in mRNA degradation- DCP1P; beta sandwich, transcription; 2.30A {Saccharomyces cerevisiae} SCOP: b.55.1.7
Probab=22.01 E-value=1e+02 Score=25.28 Aligned_cols=29 Identities=17% Similarity=0.370 Sum_probs=23.5
Q ss_pred EEEEEEcCCeEEEEeCCCCeEEEEEEecc
Q 036281 324 EFLLESSDKRVILYDSRYHEMRDLGITGL 352 (371)
Q Consensus 324 ~il~~~~~~~l~~yd~~~~~~~~v~~~~~ 352 (371)
.|+.......++.||.++++|.+.+++|.
T Consensus 36 qIL~~t~hasvYkfd~~~~eW~K~~~eG~ 64 (231)
T 1q67_A 36 QLLFHTPHASLYKWDFKKDEWNKLEYQGV 64 (231)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhcCCeEEEEEecCCCCceEecCcEEE
Confidence 45665555679999999999999999874
No 203
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=21.48 E-value=4.3e+02 Score=23.50 Aligned_cols=193 Identities=8% Similarity=0.016 Sum_probs=0.0
Q ss_pred cceEEEeecCCceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEE
Q 036281 113 DGIFCLLKSHTLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVY 192 (371)
Q Consensus 113 ~GLl~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy 192 (371)
...|++.....+ ...++.+++...+-+... .. .++.+|+..+.-.+.-+. ...+..+
T Consensus 83 ~~~ll~~~~~~I-~~i~l~~~~~~~~~~~~~--------~~--~~l~~d~~~~~lywsD~~------------~~~I~~~ 139 (400)
T 3p5b_L 83 IAYLFFTNRHEV-RKMTLDRSEYTSLIPNLR--------NV--VALDTEVASNRIYWSDLS------------QRMICST 139 (400)
T ss_dssp SCEEEEEETTEE-EEECTTSCSCEEEECSCS--------CE--EEEEEETTTTEEEEEETT------------TTEEEEE
T ss_pred cceeEEecccee-EEEccCCcceeEeccccC--------cc--eEEeeeeccCceEEEecC------------CCeEEEE
Q ss_pred EcCC----CceeecCccccccceeccccceEEE-CceEEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCC
Q 036281 193 NFST----NSWRDLKGFEMRFDYMVDRIYNVYL-NGYCYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVK 267 (371)
Q Consensus 193 ~~~~----~~Wr~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 267 (371)
+..+ .....+.......|.... +-. +|.+||..... ..|..+|+.......+-.......
T Consensus 140 ~~~g~~~~~~~~~~~~~~~~~p~gla----vD~~~~~lY~~d~~~---~~I~~~~~~g~~~~~l~~~~~~~P-------- 204 (400)
T 3p5b_L 140 QLDRAHGVSSYDTVISRDIQAPDGLA----VDWIHSNIYWTDSVL---GTVSVADTKGVKRKTLFRENGSKP-------- 204 (400)
T ss_dssp EC------CCCEEEECSSCSCEEEEE----EETTTTEEEEEETTT---TEEEEECTTTCSEEEEEECSSCCE--------
T ss_pred EcccCCCCCcceEEEeCCCCCcccEE----EEecCCceEEEECCC---CeEEEEeCCCCceEEEEeCCCCCc--------
Q ss_pred CcceEEEeCCeEEEEecCCCCCEEEEEEeeC-CceeEEEEecCCCcceeeeEEe-eCCEEEEE-EcCCeEEEEeCCCCeE
Q 036281 268 TPWMLGTYDDCLSLLYSDKFAHSFELWIMKG-GFWIKHLTFGPFIETYQPLGFW-RKDEFLLE-SSDKRVILYDSRYHEM 344 (371)
Q Consensus 268 ~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~-~~W~~~~~i~~~~~~~~~~~~~-~~~~il~~-~~~~~l~~yd~~~~~~ 344 (371)
....+-..+|.|+... ....-.|+...- .+-.+...-.... ....+++. .++.|++. .....+..+|++....
T Consensus 205 ~~iavdp~~g~ly~td---~~~~~~I~~~~~dG~~~~~~~~~~l~-~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (400)
T 3p5b_L 205 RAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 280 (400)
T ss_dssp EEEEEETTTTEEEEEE---CSSSCCEEEEETTSCSCEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC
T ss_pred ceEEEecccCeEEEEe---CCCCCEEEEEeCCCCccEEEEECCCC-ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc
Q ss_pred EEE
Q 036281 345 RDL 347 (371)
Q Consensus 345 ~~v 347 (371)
+.+
T Consensus 281 ~~~ 283 (400)
T 3p5b_L 281 KTI 283 (400)
T ss_dssp EEE
T ss_pred EEE
No 204
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=21.20 E-value=3.8e+02 Score=22.67 Aligned_cols=139 Identities=9% Similarity=-0.028 Sum_probs=78.6
Q ss_pred cceEEEEEcCCCceeecCccccccceeccccceEEECceEEEEEecCCCCcEEEEEECCCce-EEEeCCCCCCCCCcccc
Q 036281 186 FSHVAVYNFSTNSWRDLKGFEMRFDYMVDRIYNVYLNGYCYWVVCRPDYSKAILAFSMSNEV-FQEIKGPSVPQTTTYYQ 264 (371)
Q Consensus 186 ~~~~~vy~~~~~~Wr~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~Il~fD~~~e~-~~~i~~P~~~~~~~~~~ 264 (371)
...+.+++..++.=...-.. +.......-...++.+|-++... ..+.+||..+.+ ...++.|...
T Consensus 64 ~S~v~~vD~~Tgkv~~~~~l----~~~~FgeGit~~g~~ly~ltw~~---~~v~v~D~~t~~~~~ti~~~~eG------- 129 (262)
T 3nol_A 64 RSSIRKVDIESGKTLQQIEL----GKRYFGEGISDWKDKIVGLTWKN---GLGFVWNIRNLRQVRSFNYDGEG------- 129 (262)
T ss_dssp EEEEEEECTTTCCEEEEEEC----CTTCCEEEEEEETTEEEEEESSS---SEEEEEETTTCCEEEEEECSSCC-------
T ss_pred CceEEEEECCCCcEEEEEec----CCccceeEEEEeCCEEEEEEeeC---CEEEEEECccCcEEEEEECCCCc-------
Confidence 45788888888642221111 11110112245677898887653 589999998754 4667665421
Q ss_pred cCCCcceEEEeCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCC--C-ccee--eeEEeeCCEEEEEE-cCCeEEEEe
Q 036281 265 SVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPF--I-ETYQ--PLGFWRKDEFLLES-SDKRVILYD 338 (371)
Q Consensus 265 ~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~--~-~~~~--~~~~~~~~~il~~~-~~~~l~~yd 338 (371)
..|..-+++|.+.. ... .||+++-..=...-+|... . .+.. -+.. .+|+|+... ..+.+...|
T Consensus 130 -----~glt~dg~~L~~Sd---Gs~--~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~-~~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 130 -----WGLTHNDQYLIMSD---GTP--VLRFLDPESLTPVRTITVTAHGEELPELNELEW-VDGEIFANVWQTNKIVRID 198 (262)
T ss_dssp -----CCEEECSSCEEECC---SSS--EEEEECTTTCSEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEEEC
T ss_pred -----eEEecCCCEEEEEC---CCC--eEEEEcCCCCeEEEEEEeccCCccccccceeEE-ECCEEEEEEccCCeEEEEE
Confidence 23444456666632 223 4788776333334444321 0 1111 1333 378888876 467899999
Q ss_pred CCCCeE-EEEEE
Q 036281 339 SRYHEM-RDLGI 349 (371)
Q Consensus 339 ~~~~~~-~~v~~ 349 (371)
++|+++ +++..
T Consensus 199 p~tG~V~~~Id~ 210 (262)
T 3nol_A 199 PETGKVTGIIDL 210 (262)
T ss_dssp TTTCBEEEEEEC
T ss_pred CCCCcEEEEEEC
Confidence 999986 55555
No 205
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=21.06 E-value=3.7e+02 Score=23.30 Aligned_cols=67 Identities=6% Similarity=-0.016 Sum_probs=40.8
Q ss_pred eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEEEEEEcCCeEEEEeCCCCeE
Q 036281 275 YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEFLLESSDKRVILYDSRYHEM 344 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~il~~~~~~~l~~yd~~~~~~ 344 (371)
-+|++.++.....+..+.||-++.. ..+..+.... -..-+.+.++|+++....++.+..++..+++.
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~--~~~~~~~~~~-~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDL--TEKFEIETRG-EVKDLHFSTDGKVVAYITGSSLEVISTVTGSC 209 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTT--EEEEEEECSS-CCCEEEECTTSSEEEEECSSCEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCC--cEEEEeCCCC-ceEEEEEccCCceEEeccceeEEEEEeccCcc
Confidence 3666555333346789999988762 3344443222 23345667788877776666777777766654
No 206
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=21.02 E-value=3.5e+02 Score=23.30 Aligned_cols=65 Identities=5% Similarity=-0.054 Sum_probs=41.6
Q ss_pred eCCeEEEEecCCCCCE-EEEEEeeCCceeEEEEec-C-CCcceeeeEEeeCCEEEEE-EcCCeEEEEeCCCCe
Q 036281 275 YDDCLSLLYSDKFAHS-FELWIMKGGFWIKHLTFG-P-FIETYQPLGFWRKDEFLLE-SSDKRVILYDSRYHE 343 (371)
Q Consensus 275 ~~g~L~l~~~~~~~~~-~~iW~L~~~~W~~~~~i~-~-~~~~~~~~~~~~~~~il~~-~~~~~l~~yd~~~~~ 343 (371)
-+|++.+.. ..+.. +.||-++. ......+. . +..-..-+.+.++|.+++. ..++.+.+||++++.
T Consensus 205 ~~g~~l~s~--s~d~~~v~iwd~~~--~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 205 RKSDMVATC--SQDGTIIRVFKTED--GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTSSEEEEE--ETTCSEEEEEETTT--CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCEEEEE--eCCCCEEEEEECCC--CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 356665544 35566 99999865 34444443 1 3333445666778876665 567889999997654
No 207
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=20.96 E-value=4.4e+02 Score=23.37 Aligned_cols=184 Identities=10% Similarity=0.011 Sum_probs=91.7
Q ss_pred CceEEEeccccccccCCCCCCCCCCCCCCceeeEEEeccCCCCCeEEEEEeeEecCCCCCCCCcceEEEEEcCCCceeec
Q 036281 123 TLINLWNVSLNEYRGLPECRPRLPCYTRTHYANIALGLDLVTGDFKLVLILTLWNDQRDSFHDFSHVAVYNFSTNSWRDL 202 (371)
Q Consensus 123 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~~~g~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~vy~~~~~~Wr~~ 202 (371)
.+ +++|..|++.+.+...+. . ...+.+.|.. .+ ++.... .+ ....+.+++..++..+.+
T Consensus 204 ~i-~~~d~~tg~~~~l~~~~~--------~--~~~~~~spdg-~~-la~~~~--~~------g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 204 AL-VIQTLANGAVRQVASFPR--------H--NGAPAFSPDG-SK-LAFALS--KT------GSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp EE-EEEETTTCCEEEEECCSS--------C--EEEEEECTTS-SE-EEEEEC--TT------SSCEEEEEETTTCCEEEC
T ss_pred EE-EEEECCCCcEEEeecCCC--------c--ccCEEEcCCC-CE-EEEEEe--cC------CCceEEEEECCCCCEEeC
Confidence 45 999999988766543221 1 2345555542 32 222211 11 145688889888776655
Q ss_pred CccccccceeccccceEEECce-EEEEEecCCCCcEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEE-EeCCeEE
Q 036281 203 KGFEMRFDYMVDRIYNVYLNGY-CYWVVCRPDYSKAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLG-TYDDCLS 280 (371)
Q Consensus 203 ~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~-~~~g~L~ 280 (371)
.... ... ......-+|. ++.....+ ....|..+|+.+.+...+.... . ....+. .-+|+..
T Consensus 263 ~~~~--~~~---~~~~~spdg~~l~~~s~~~-g~~~i~~~d~~~~~~~~l~~~~---~--------~~~~~~~spdG~~l 325 (415)
T 2hqs_A 263 TDGR--SNN---TEPTWFPDSQNLAFTSDQA-GRPQVYKVNINGGAPQRITWEG---S--------QNQDADVSSDGKFM 325 (415)
T ss_dssp CCCS--SCE---EEEEECTTSSEEEEEECTT-SSCEEEEEETTSSCCEECCCSS---S--------EEEEEEECTTSSEE
T ss_pred cCCC--Ccc---cceEECCCCCEEEEEECCC-CCcEEEEEECCCCCEEEEecCC---C--------cccCeEECCCCCEE
Confidence 4221 000 0001112454 44333222 2346888898887654442211 0 111222 2456544
Q ss_pred EEe-cCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEeeCCEE-EEEEcCC---eEEEEeCCCCeEEEEE
Q 036281 281 LLY-SDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWRKDEF-LLESSDK---RVILYDSRYHEMRDLG 348 (371)
Q Consensus 281 l~~-~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~~~~i-l~~~~~~---~l~~yd~~~~~~~~v~ 348 (371)
++. .+.....+.+|-++.... ..+.... ....+.+.++|+. ++...+. .++.+|++++..+.+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~---~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGV---QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCE---EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEEECcCCceEEEEEECCCCCE---EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 433 222345666666654322 2232222 2333455667764 4444333 7999999988877763
No 208
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=20.80 E-value=3.6e+02 Score=22.32 Aligned_cols=56 Identities=9% Similarity=0.246 Sum_probs=37.5
Q ss_pred CCCEEEEEEeeC--CceeEEEEecCCCcceeeeEEeeC---CEEEEE-EcCCeEEEEeCCCC
Q 036281 287 FAHSFELWIMKG--GFWIKHLTFGPFIETYQPLGFWRK---DEFLLE-SSDKRVILYDSRYH 342 (371)
Q Consensus 287 ~~~~~~iW~L~~--~~W~~~~~i~~~~~~~~~~~~~~~---~~il~~-~~~~~l~~yd~~~~ 342 (371)
.+..+.||-+.. ..|.....+..+.....-+.+.++ +.+++. ..++.+.+||+++.
T Consensus 178 ~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 178 ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 567899999987 456666666544433444555555 355544 56788999998764
No 209
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=20.65 E-value=3.8e+02 Score=22.49 Aligned_cols=67 Identities=12% Similarity=0.039 Sum_probs=40.5
Q ss_pred CeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcceeeeEEee-CCEEEEE-EcCCeEEEEeCCCCeEEEE
Q 036281 277 DCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETYQPLGFWR-KDEFLLE-SSDKRVILYDSRYHEMRDL 347 (371)
Q Consensus 277 g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~~~~~~~~-~~~il~~-~~~~~l~~yd~~~~~~~~v 347 (371)
|.+.+.. .....+.||-++. ......+.....-..-+.+.+ ++.+++. ..++.+.+||+++++....
T Consensus 85 ~~~l~~~--~~dg~i~v~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 85 HPLLAVA--GSRGIIRIINPIT--MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp CEEEEEE--ETTCEEEEECTTT--CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CCEEEEe--cCCCEEEEEEchh--ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 4555544 3567899998765 223334433332334455555 6665555 5678899999998875444
No 210
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=20.35 E-value=67 Score=17.23 Aligned_cols=22 Identities=9% Similarity=0.252 Sum_probs=17.4
Q ss_pred eeecceEEEeecCCceEEEeccc
Q 036281 110 GPYDGIFCLLKSHTLINLWNVSL 132 (371)
Q Consensus 110 ~s~~GLl~~~~~~~~~~V~NP~T 132 (371)
++|.||-|......+ -||-|-|
T Consensus 15 dcceglecwkrrrsf-evcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKRRRSF-EVCVPKT 36 (37)
T ss_dssp CBCTTEEEECCSSSC-CEEEECC
T ss_pred chhhhHHHHHhccce-eeecCCC
Confidence 688999998877767 7887765
No 211
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=20.29 E-value=3.7e+02 Score=22.29 Aligned_cols=95 Identities=12% Similarity=0.013 Sum_probs=55.1
Q ss_pred cEEEEEECCCceEEEeCCCCCCCCCcccccCCCcceEEE-eCCeEEEEecCCCCCEEEEEEeeCCceeEEEEecCCCcce
Q 036281 236 KAILAFSMSNEVFQEIKGPSVPQTTTYYQSVKTPWMLGT-YDDCLSLLYSDKFAHSFELWIMKGGFWIKHLTFGPFIETY 314 (371)
Q Consensus 236 ~~Il~fD~~~e~~~~i~~P~~~~~~~~~~~~~~~~~L~~-~~g~L~l~~~~~~~~~~~iW~L~~~~W~~~~~i~~~~~~~ 314 (371)
..|..+|+.+.+....... ... ....+.. .+|++.+.. ..+..+.||-+.. +.....+.... ..
T Consensus 195 ~~i~i~d~~~~~~~~~~~~-h~~---------~v~~~~~s~~~~~l~s~--s~Dg~i~iwd~~~--~~~~~~~~~~~-~v 259 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIG-HTG---------YLNTVTVSPDGSLCASG--GKDGQAMLWDLNE--GKHLYTLDGGD-II 259 (340)
T ss_dssp SCEEEEETTTTEEEEEECC-CSS---------CEEEEEECTTSSEEEEE--ETTCEEEEEETTT--TEEEEEEECSS-CE
T ss_pred CEEEEEECCCCceeeEecC-CCC---------cEEEEEECCCCCEEEEE--eCCCeEEEEEecc--CceeeeecCCc-eE
Confidence 3577788877655332111 100 1122322 356665544 3568899998865 33444443222 23
Q ss_pred eeeEEeeCCEEEEEEcCCeEEEEeCCCCeEE
Q 036281 315 QPLGFWRKDEFLLESSDKRVILYDSRYHEMR 345 (371)
Q Consensus 315 ~~~~~~~~~~il~~~~~~~l~~yd~~~~~~~ 345 (371)
..+.+.+++.++....++.+.+||++++...
T Consensus 260 ~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 260 NALCFSPNRYWLCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp EEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred EeeecCCCCceeeccCCCEEEEEECCCCeEE
Confidence 3445556777777777889999999988653
No 212
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=20.14 E-value=4.5e+02 Score=23.21 Aligned_cols=110 Identities=11% Similarity=0.102 Sum_probs=58.4
Q ss_pred EEECceEEEEEecCCCCcEEEEEECCCceE-EEeCCCCCCCCCcccccCCCcceEEEeCCeEEEEecCCCCCEEEEEEee
Q 036281 219 VYLNGYCYWVVCRPDYSKAILAFSMSNEVF-QEIKGPSVPQTTTYYQSVKTPWMLGTYDDCLSLLYSDKFAHSFELWIMK 297 (371)
Q Consensus 219 v~~~G~lywl~~~~~~~~~Il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~~~~~L~~~~g~L~l~~~~~~~~~~~iW~L~ 297 (371)
+..+|.....+.. ...|..+|+.+.+. ..+..+.... ....-+..++.+.+.. .....+.||-++
T Consensus 325 ~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~l~s~--~~dg~v~iwd~~ 390 (445)
T 2ovr_B 325 MELKDNILVSGNA---DSTVKIWDIKTGQCLQTLQGPNKHQ---------SAVTCLQFNKNFVITS--SDDGTVKLWDLK 390 (445)
T ss_dssp EEEETTEEEEEET---TSCEEEEETTTCCEEEEECSTTSCS---------SCEEEEEECSSEEEEE--ETTSEEEEEETT
T ss_pred EEEeCCEEEEEeC---CCeEEEEECCCCcEEEEEccCCCCC---------CCEEEEEECCCEEEEE--eCCCeEEEEECC
Confidence 4445543333332 24788999977543 4444443221 1222233456555544 367899999987
Q ss_pred CCceeEEEEec---CCCcceeeeEEeeCCEEEEEE-cCC----eEEEEeCCCC
Q 036281 298 GGFWIKHLTFG---PFIETYQPLGFWRKDEFLLES-SDK----RVILYDSRYH 342 (371)
Q Consensus 298 ~~~W~~~~~i~---~~~~~~~~~~~~~~~~il~~~-~~~----~l~~yd~~~~ 342 (371)
........... .......-+.+.+++.++... .++ .+.+||.+..
T Consensus 391 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 391 TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp TCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 63333332211 122233445666677766654 333 4999998753
No 213
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=20.11 E-value=33 Score=25.70 Aligned_cols=28 Identities=18% Similarity=0.163 Sum_probs=14.3
Q ss_pred EEEEEcCCeEEEEeCCCCeEEEEEEecc
Q 036281 325 FLLESSDKRVILYDSRYHEMRDLGITGL 352 (371)
Q Consensus 325 il~~~~~~~l~~yd~~~~~~~~v~~~~~ 352 (371)
|+.....-.++.||.++++|++.++.|.
T Consensus 26 Il~~a~~v~vY~f~~~~~~W~K~~iEGt 53 (127)
T 2qkl_A 26 IIDIASHVAVYQFDVGSQKWLKTSIEGT 53 (127)
T ss_dssp EEEEEEEEEEECC------CCEEEEEEE
T ss_pred HhccCCeEEEEEecCCCCceEEcCcEEE
Confidence 4444444456677777899999988873
Done!